Theam_0715 87937ca40d881a2bffeaa009354880b6 354 Gene3D G3DSA:3.30.70.360 163 273 4.4E-82 T 13-10-2018 Theam_0715 87937ca40d881a2bffeaa009354880b6 354 SUPERFAMILY SSF53187 2 351 1.23E-40 T 13-10-2018 Theam_0715 87937ca40d881a2bffeaa009354880b6 354 Gene3D G3DSA:3.40.630.10 8 339 4.4E-82 T 13-10-2018 Theam_0715 87937ca40d881a2bffeaa009354880b6 354 SUPERFAMILY SSF55031 163 266 2.09E-16 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Theam_0715 87937ca40d881a2bffeaa009354880b6 354 TIGRFAM TIGR01900 dapE-gram_pos: succinyl-diaminopimelate desuccinylase 3 349 9.6E-130 T 13-10-2018 IPR010174 Succinyl-diaminopimelate desuccinylase, DapE GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Theam_0715 87937ca40d881a2bffeaa009354880b6 354 Pfam PF07687 Peptidase dimerisation domain 163 259 1.8E-12 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain Theam_0715 87937ca40d881a2bffeaa009354880b6 354 Pfam PF01546 Peptidase family M20/M25/M40 60 349 1.7E-22 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 Theam_0715 87937ca40d881a2bffeaa009354880b6 354 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 58 67 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Theam_0785 eae47ccea2112f99bea5883ea0f8ed61 401 SUPERFAMILY SSF63867 325 399 7.59E-16 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0785 eae47ccea2112f99bea5883ea0f8ed61 401 SMART SM00852 176 314 2.7E-34 T 13-10-2018 IPR001453 MoaB/Mog domain Theam_0785 eae47ccea2112f99bea5883ea0f8ed61 401 Gene3D G3DSA:2.170.190.11 45 137 2.0E-114 T 13-10-2018 Theam_0785 eae47ccea2112f99bea5883ea0f8ed61 401 Pfam PF00994 Probable molybdopterin binding domain 176 313 2.9E-24 T 13-10-2018 IPR001453 MoaB/Mog domain Theam_0785 eae47ccea2112f99bea5883ea0f8ed61 401 Gene3D G3DSA:3.90.105.10 24 170 2.0E-114 T 13-10-2018 Theam_0785 eae47ccea2112f99bea5883ea0f8ed61 401 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 173 306 4.8E-29 T 13-10-2018 IPR001453 MoaB/Mog domain Theam_0785 eae47ccea2112f99bea5883ea0f8ed61 401 Pfam PF03453 MoeA N-terminal region (domain I and II) 5 163 5.1E-36 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0785 eae47ccea2112f99bea5883ea0f8ed61 401 Gene3D G3DSA:2.40.340.10 324 393 2.0E-114 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0785 eae47ccea2112f99bea5883ea0f8ed61 401 Gene3D G3DSA:3.40.980.10 171 323 2.0E-114 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Theam_0785 eae47ccea2112f99bea5883ea0f8ed61 401 SUPERFAMILY SSF63882 3 172 3.79E-47 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0785 eae47ccea2112f99bea5883ea0f8ed61 401 SUPERFAMILY SSF53218 173 319 1.14E-36 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Theam_0785 eae47ccea2112f99bea5883ea0f8ed61 401 Pfam PF03454 MoeA C-terminal region (domain IV) 327 398 4.2E-16 T 13-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_1435 985982417d3e0fe5ea7cfe0f18c7d6cf 220 Gene3D G3DSA:3.20.20.140 1 190 3.1E-29 T 13-10-2018 Theam_1435 985982417d3e0fe5ea7cfe0f18c7d6cf 220 Pfam PF02811 PHP domain 3 72 1.2E-7 T 13-10-2018 IPR004013 PHP domain GO:0003824 Theam_1435 985982417d3e0fe5ea7cfe0f18c7d6cf 220 SMART SM00481 2 75 7.1E-17 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Theam_1435 985982417d3e0fe5ea7cfe0f18c7d6cf 220 SUPERFAMILY SSF89550 10 204 5.23E-40 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Theam_0876 ec3047803fc120717d970f549fd3dae8 303 Gene3D G3DSA:3.40.980.10 148 299 3.5E-49 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Theam_0876 ec3047803fc120717d970f549fd3dae8 303 SUPERFAMILY SSF53218 147 297 3.27E-41 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Theam_0876 ec3047803fc120717d970f549fd3dae8 303 SMART SM00852 150 294 3.3E-29 T 13-10-2018 IPR001453 MoaB/Mog domain Theam_0876 ec3047803fc120717d970f549fd3dae8 303 Pfam PF00994 Probable molybdopterin binding domain 150 293 5.8E-37 T 13-10-2018 IPR001453 MoaB/Mog domain Theam_0876 ec3047803fc120717d970f549fd3dae8 303 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 209 222 - T 13-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Theam_0876 ec3047803fc120717d970f549fd3dae8 303 Gene3D G3DSA:3.30.70.640 1 147 1.9E-54 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0876 ec3047803fc120717d970f549fd3dae8 303 SUPERFAMILY SSF55040 3 140 6.54E-50 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0876 ec3047803fc120717d970f549fd3dae8 303 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 147 288 2.8E-33 T 13-10-2018 IPR001453 MoaB/Mog domain Theam_0876 ec3047803fc120717d970f549fd3dae8 303 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 1 138 1.2E-54 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0876 ec3047803fc120717d970f549fd3dae8 303 Pfam PF01967 MoaC family 4 136 2.4E-48 T 13-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0876 ec3047803fc120717d970f549fd3dae8 303 PIRSF PIRSF036594 3 303 5.1E-81 T 13-10-2018 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823 Theam_0356 d838d09131aafad061a8c85f2c147421 431 Gene3D G3DSA:3.40.50.720 1 132 6.1E-26 T 13-10-2018 Theam_0356 d838d09131aafad061a8c85f2c147421 431 SUPERFAMILY SSF116726 142 219 5.36E-12 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Theam_0356 d838d09131aafad061a8c85f2c147421 431 Gene3D G3DSA:3.40.50.720 227 360 4.8E-27 T 13-10-2018 Theam_0356 d838d09131aafad061a8c85f2c147421 431 Pfam PF02080 TrkA-C domain 151 216 2.5E-11 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Theam_0356 d838d09131aafad061a8c85f2c147421 431 SUPERFAMILY SSF116726 358 428 1.83E-6 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Theam_0356 d838d09131aafad061a8c85f2c147421 431 SUPERFAMILY SSF51735 1 143 6.41E-24 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0356 d838d09131aafad061a8c85f2c147421 431 Gene3D G3DSA:3.30.70.1450 362 431 3.2E-8 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Theam_0356 d838d09131aafad061a8c85f2c147421 431 SUPERFAMILY SSF51735 228 371 1.79E-21 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0356 d838d09131aafad061a8c85f2c147421 431 Gene3D G3DSA:3.30.70.1450 133 222 8.1E-15 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Theam_0356 d838d09131aafad061a8c85f2c147421 431 PRINTS PR00335 TrkA potassium uptake protein signature 287 297 8.4E-9 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Theam_0356 d838d09131aafad061a8c85f2c147421 431 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 8.4E-9 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Theam_0356 d838d09131aafad061a8c85f2c147421 431 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 8.4E-9 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Theam_0356 d838d09131aafad061a8c85f2c147421 431 PRINTS PR00335 TrkA potassium uptake protein signature 276 286 8.4E-9 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Theam_0356 d838d09131aafad061a8c85f2c147421 431 PRINTS PR00335 TrkA potassium uptake protein signature 300 314 8.4E-9 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Theam_0356 d838d09131aafad061a8c85f2c147421 431 Pfam PF02254 TrkA-N domain 3 102 2.8E-18 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Theam_0356 d838d09131aafad061a8c85f2c147421 431 Pfam PF02254 TrkA-N domain 229 345 8.0E-17 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Theam_1142 561cbc0a7f7c12f28787583f081d6f50 427 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 1.9E-176 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Theam_1142 561cbc0a7f7c12f28787583f081d6f50 427 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 43.279 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Theam_1142 561cbc0a7f7c12f28787583f081d6f50 427 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 225 401 1.4E-40 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1142 561cbc0a7f7c12f28787583f081d6f50 427 PIRSF PIRSF001529 1 427 3.2E-189 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Theam_1142 561cbc0a7f7c12f28787583f081d6f50 427 Gene3D G3DSA:3.30.930.10 109 427 4.6E-130 T 13-10-2018 Theam_1142 561cbc0a7f7c12f28787583f081d6f50 427 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 111 2.2E-28 T 13-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Theam_1142 561cbc0a7f7c12f28787583f081d6f50 427 Gene3D G3DSA:1.10.287.40 1 108 2.4E-26 T 13-10-2018 Theam_1142 561cbc0a7f7c12f28787583f081d6f50 427 SUPERFAMILY SSF55681 120 426 5.92E-106 T 13-10-2018 Theam_1142 561cbc0a7f7c12f28787583f081d6f50 427 PRINTS PR00981 Seryl-tRNA synthetase signature 279 292 1.5E-32 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Theam_1142 561cbc0a7f7c12f28787583f081d6f50 427 PRINTS PR00981 Seryl-tRNA synthetase signature 267 279 1.5E-32 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Theam_1142 561cbc0a7f7c12f28787583f081d6f50 427 PRINTS PR00981 Seryl-tRNA synthetase signature 319 332 1.5E-32 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Theam_1142 561cbc0a7f7c12f28787583f081d6f50 427 PRINTS PR00981 Seryl-tRNA synthetase signature 354 370 1.5E-32 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Theam_1142 561cbc0a7f7c12f28787583f081d6f50 427 PRINTS PR00981 Seryl-tRNA synthetase signature 336 352 1.5E-32 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Theam_1142 561cbc0a7f7c12f28787583f081d6f50 427 SUPERFAMILY SSF46589 1 116 1.1E-27 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Theam_1632 7698c9c8ba1adc18876520da73e84a2a 235 SUPERFAMILY SSF52402 3 223 1.68E-60 T 13-10-2018 Theam_1632 7698c9c8ba1adc18876520da73e84a2a 235 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 223 52.736 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Theam_1632 7698c9c8ba1adc18876520da73e84a2a 235 Pfam PF06508 Queuosine biosynthesis protein QueC 4 217 5.3E-77 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Theam_1632 7698c9c8ba1adc18876520da73e84a2a 235 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 210 3.0E-64 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Theam_1632 7698c9c8ba1adc18876520da73e84a2a 235 PIRSF PIRSF006293 1 229 7.9E-76 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Theam_1632 7698c9c8ba1adc18876520da73e84a2a 235 Gene3D G3DSA:3.40.50.620 2 233 6.3E-76 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_0328 9fa97b395d78b267b9070147fbea294b 531 Gene3D G3DSA:3.40.140.20 210 370 1.9E-57 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Theam_0328 9fa97b395d78b267b9070147fbea294b 531 PIRSF PIRSF000414 1 531 6.6E-216 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Theam_0328 9fa97b395d78b267b9070147fbea294b 531 SUPERFAMILY SSF52335 5 192 5.89E-71 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Theam_0328 9fa97b395d78b267b9070147fbea294b 531 Pfam PF02142 MGS-like domain 15 129 1.2E-28 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Theam_0328 9fa97b395d78b267b9070147fbea294b 531 SMART SM00798 134 463 1.4E-184 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Theam_0328 9fa97b395d78b267b9070147fbea294b 531 SUPERFAMILY SSF53927 214 531 4.61E-126 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Theam_0328 9fa97b395d78b267b9070147fbea294b 531 Gene3D G3DSA:3.40.140.20 394 531 6.7E-59 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Theam_0328 9fa97b395d78b267b9070147fbea294b 531 Gene3D G3DSA:3.40.50.1380 1 196 1.3E-89 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Theam_0328 9fa97b395d78b267b9070147fbea294b 531 SMART SM00851 15 129 3.5E-60 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Theam_0328 9fa97b395d78b267b9070147fbea294b 531 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 531 44.686 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Theam_0328 9fa97b395d78b267b9070147fbea294b 531 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 462 1.5E-116 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Theam_0328 9fa97b395d78b267b9070147fbea294b 531 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5 531 1.2E-212 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Theam_1215 bbc2242ff709f0d2ac3013ca4ef460b9 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 264 2.2E-82 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Theam_1215 bbc2242ff709f0d2ac3013ca4ef460b9 273 SUPERFAMILY SSF51735 4 159 5.2E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_1215 bbc2242ff709f0d2ac3013ca4ef460b9 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 220 242 - T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Theam_1215 bbc2242ff709f0d2ac3013ca4ef460b9 273 PIRSF PIRSF000193 2 266 2.4E-80 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Theam_1215 bbc2242ff709f0d2ac3013ca4ef460b9 273 SUPERFAMILY SSF48179 161 266 8.84E-33 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Theam_1215 bbc2242ff709f0d2ac3013ca4ef460b9 273 Gene3D G3DSA:1.10.3730.10 165 266 4.7E-35 T 13-10-2018 Theam_1215 bbc2242ff709f0d2ac3013ca4ef460b9 273 Gene3D G3DSA:3.40.50.720 1 164 4.1E-47 T 13-10-2018 Theam_1215 bbc2242ff709f0d2ac3013ca4ef460b9 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 263 2.0E-37 T 13-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Theam_1215 bbc2242ff709f0d2ac3013ca4ef460b9 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 1.8E-20 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Theam_1215 bbc2242ff709f0d2ac3013ca4ef460b9 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 264 25.507 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Theam_1200 e139b864866d0ea79bbfdba456b9da8b 238 SUPERFAMILY SSF55120 47 236 1.34E-49 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_1200 e139b864866d0ea79bbfdba456b9da8b 238 Gene3D G3DSA:3.30.70.580 62 228 3.4E-60 T 13-10-2018 Theam_1200 e139b864866d0ea79bbfdba456b9da8b 238 SUPERFAMILY SSF55174 1 59 1.26E-15 T 13-10-2018 Theam_1200 e139b864866d0ea79bbfdba456b9da8b 238 Gene3D G3DSA:3.10.290.10 1 57 1.2E-21 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Theam_1200 e139b864866d0ea79bbfdba456b9da8b 238 SMART SM00363 1 59 1.7E-16 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_1200 e139b864866d0ea79bbfdba456b9da8b 238 Gene3D G3DSA:3.30.70.1560 128 211 3.4E-60 T 13-10-2018 Theam_1200 e139b864866d0ea79bbfdba456b9da8b 238 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Theam_1200 e139b864866d0ea79bbfdba456b9da8b 238 Pfam PF01479 S4 domain 1 46 3.2E-16 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_1200 e139b864866d0ea79bbfdba456b9da8b 238 Pfam PF00849 RNA pseudouridylate synthase 61 194 8.6E-22 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_1200 e139b864866d0ea79bbfdba456b9da8b 238 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 225 1.8E-52 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Theam_0352 fe7ee17c3c0afcf9f2b7c48e23bed120 249 Gene3D G3DSA:3.40.1090.10 97 218 9.9E-12 T 13-10-2018 Theam_0352 fe7ee17c3c0afcf9f2b7c48e23bed120 249 SUPERFAMILY SSF52151 2 241 3.92E-41 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Theam_0352 fe7ee17c3c0afcf9f2b7c48e23bed120 249 Pfam PF01734 Patatin-like phospholipase 6 161 1.5E-24 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Theam_0352 fe7ee17c3c0afcf9f2b7c48e23bed120 249 Gene3D G3DSA:3.40.1090.20 4 96 1.9E-13 T 13-10-2018 Theam_0085 566c39887fddd82b7899fa267e4c7968 1171 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 1154 4.4E-66 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Theam_0085 566c39887fddd82b7899fa267e4c7968 1171 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1163 19.872 T 13-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Theam_0085 566c39887fddd82b7899fa267e4c7968 1171 Pfam PF06470 SMC proteins Flexible Hinge Domain 520 618 4.4E-9 T 13-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 Theam_0085 566c39887fddd82b7899fa267e4c7968 1171 SUPERFAMILY SSF52540 1 1156 6.67E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0085 566c39887fddd82b7899fa267e4c7968 1171 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1160 1.4E-263 T 13-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Theam_0085 566c39887fddd82b7899fa267e4c7968 1171 Gene3D G3DSA:3.40.50.300 912 1168 2.4E-46 T 13-10-2018 Theam_0085 566c39887fddd82b7899fa267e4c7968 1171 Gene3D G3DSA:3.40.50.300 1 232 2.3E-52 T 13-10-2018 Theam_0085 566c39887fddd82b7899fa267e4c7968 1171 PIRSF PIRSF005719 1 1169 1.1E-242 T 13-10-2018 IPR024704 Structural maintenance of chromosomes protein Theam_0085 566c39887fddd82b7899fa267e4c7968 1171 SUPERFAMILY SSF75553 475 669 4.97E-12 T 13-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 Theam_0085 566c39887fddd82b7899fa267e4c7968 1171 Gene3D G3DSA:1.20.5.340 233 324 4.1E-5 T 13-10-2018 Theam_0085 566c39887fddd82b7899fa267e4c7968 1171 SUPERFAMILY SSF57997 186 430 7.52E-5 T 13-10-2018 Theam_1103 aff3b7ad6c3a92a15454a491d86676fa 85 SUPERFAMILY SSF54862 29 84 3.52E-15 T 13-10-2018 Theam_1103 aff3b7ad6c3a92a15454a491d86676fa 85 Gene3D G3DSA:3.30.70.20 30 85 4.3E-12 T 13-10-2018 Theam_1103 aff3b7ad6c3a92a15454a491d86676fa 85 Pfam PF12838 4Fe-4S dicluster domain 34 83 7.7E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_1103 aff3b7ad6c3a92a15454a491d86676fa 85 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 35 46 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0226 2a91a9fc568b9fa36e7260bb075695d6 709 Gene3D G3DSA:1.10.10.160 108 182 2.6E-91 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily Theam_0226 2a91a9fc568b9fa36e7260bb075695d6 709 Pfam PF13361 UvrD-like helicase C-terminal domain 269 606 2.5E-68 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Theam_0226 2a91a9fc568b9fa36e7260bb075695d6 709 SUPERFAMILY SSF52540 2 630 8.25E-178 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0226 2a91a9fc568b9fa36e7260bb075695d6 709 Gene3D G3DSA:3.40.50.300 8 264 2.6E-91 T 13-10-2018 Theam_0226 2a91a9fc568b9fa36e7260bb075695d6 709 Gene3D G3DSA:1.10.486.10 374 538 8.7E-120 T 13-10-2018 Theam_0226 2a91a9fc568b9fa36e7260bb075695d6 709 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 264 4.0E-72 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Theam_0226 2a91a9fc568b9fa36e7260bb075695d6 709 Gene3D G3DSA:3.40.50.300 272 623 8.7E-120 T 13-10-2018 Theam_1307 bd29540b3c7df9bdfa1d22a7e22d33f8 104 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 4 98 1.4E-22 T 13-10-2018 IPR002767 Thiamine-binding protein Theam_1307 bd29540b3c7df9bdfa1d22a7e22d33f8 104 SUPERFAMILY SSF89957 1 98 1.96E-28 T 13-10-2018 IPR029756 MTH1187/YkoF-like Theam_1307 bd29540b3c7df9bdfa1d22a7e22d33f8 104 Gene3D G3DSA:3.30.70.930 1 97 1.6E-29 T 13-10-2018 IPR029756 MTH1187/YkoF-like Theam_1307 bd29540b3c7df9bdfa1d22a7e22d33f8 104 Pfam PF01910 Thiamine-binding protein 5 95 2.1E-26 T 13-10-2018 IPR002767 Thiamine-binding protein Theam_1661 8434d703932380c0da3a3772544fc57b 481 SUPERFAMILY SSF47917 358 473 3.92E-53 T 13-10-2018 Theam_1661 8434d703932380c0da3a3772544fc57b 481 Gene3D G3DSA:3.40.50.300 88 357 1.3E-112 T 13-10-2018 Theam_1661 8434d703932380c0da3a3772544fc57b 481 SUPERFAMILY SSF52540 89 361 2.37E-93 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1661 8434d703932380c0da3a3772544fc57b 481 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 142 355 1.7E-64 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_1661 8434d703932380c0da3a3772544fc57b 481 Hamap MF_01347 ATP synthase subunit beta [atpB]. 3 473 56.808 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Theam_1661 8434d703932380c0da3a3772544fc57b 481 Gene3D G3DSA:2.40.10.170 3 86 1.9E-28 T 13-10-2018 Theam_1661 8434d703932380c0da3a3772544fc57b 481 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 346 355 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_1661 8434d703932380c0da3a3772544fc57b 481 Gene3D G3DSA:1.10.1140.10 358 478 9.3E-57 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_1661 8434d703932380c0da3a3772544fc57b 481 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 85 5.2E-24 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_1661 8434d703932380c0da3a3772544fc57b 481 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 5 473 7.8E-243 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Theam_1661 8434d703932380c0da3a3772544fc57b 481 SUPERFAMILY SSF50615 4 86 1.53E-24 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_1661 8434d703932380c0da3a3772544fc57b 481 SMART SM00382 154 417 0.0028 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0581 d7afdc2250d506e5cf59a05f519aab22 301 Pfam PF00850 Histone deacetylase domain 19 296 3.0E-76 T 13-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Theam_0581 d7afdc2250d506e5cf59a05f519aab22 301 Gene3D G3DSA:3.40.800.20 3 301 1.0E-90 T 13-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Theam_0581 d7afdc2250d506e5cf59a05f519aab22 301 PRINTS PR01270 Histone deacetylase superfamily signature 117 140 2.0E-17 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Theam_0581 d7afdc2250d506e5cf59a05f519aab22 301 PRINTS PR01270 Histone deacetylase superfamily signature 150 165 2.0E-17 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Theam_0581 d7afdc2250d506e5cf59a05f519aab22 301 PRINTS PR01270 Histone deacetylase superfamily signature 229 239 2.0E-17 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Theam_0581 d7afdc2250d506e5cf59a05f519aab22 301 SUPERFAMILY SSF52768 3 299 5.76E-96 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily Theam_0657 1865f0bbc467f8c82febfbd404bbf4a5 210 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 208 39.502 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Theam_0657 1865f0bbc467f8c82febfbd404bbf4a5 210 SUPERFAMILY SSF51366 2 206 5.96E-59 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Theam_0657 1865f0bbc467f8c82febfbd404bbf4a5 210 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 3 203 4.7E-41 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Theam_0657 1865f0bbc467f8c82febfbd404bbf4a5 210 Gene3D G3DSA:3.20.20.70 1 207 4.5E-70 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0654 c097dd3042d4e0363c49f2a56229eea4 324 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 251 5.0E-61 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Theam_0654 c097dd3042d4e0363c49f2a56229eea4 324 Gene3D G3DSA:3.90.25.10 172 305 1.9E-129 T 13-10-2018 Theam_0654 c097dd3042d4e0363c49f2a56229eea4 324 SUPERFAMILY SSF51735 2 322 2.47E-97 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0654 c097dd3042d4e0363c49f2a56229eea4 324 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 321 2.4E-142 T 13-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Theam_0654 c097dd3042d4e0363c49f2a56229eea4 324 Gene3D G3DSA:3.40.50.720 3 251 1.9E-129 T 13-10-2018 Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 164 3.8E-14 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 Pfam PF00009 Elongation factor Tu GTP binding domain 5 170 2.5E-33 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 Gene3D G3DSA:1.10.10.2770 446 571 2.2E-21 T 13-10-2018 Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 Gene3D G3DSA:2.40.30.10 179 299 7.8E-34 T 13-10-2018 Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 8 630 3.8E-127 T 13-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 Pfam PF09107 Elongation factor SelB, winged helix 587 630 1.9E-18 T 13-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 SUPERFAMILY SSF50447 182 271 1.24E-23 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 SUPERFAMILY SSF46785 441 509 1.01E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 32 47 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 Gene3D G3DSA:1.10.10.10 574 632 5.0E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 SUPERFAMILY SSF52540 2 198 1.64E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 Pfam PF03144 Elongation factor Tu domain 2 197 263 2.9E-9 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 SUPERFAMILY SSF50465 269 362 3.31E-18 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 Gene3D G3DSA:3.40.50.300 6 174 4.4E-51 T 13-10-2018 Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 Pfam PF09106 Elongation factor SelB, winged helix 451 502 4.0E-5 T 13-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Theam_1208 2e9be7c87fe12d4d4c94edbab1591e5e 636 SUPERFAMILY SSF46785 584 630 1.29E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_1475 cd584bbe7e268a14a64e192914769647 108 PRINTS PR00421 Thioredoxin family signature 30 39 5.0E-9 T 13-10-2018 Theam_1475 cd584bbe7e268a14a64e192914769647 108 PRINTS PR00421 Thioredoxin family signature 70 81 5.0E-9 T 13-10-2018 Theam_1475 cd584bbe7e268a14a64e192914769647 108 PRINTS PR00421 Thioredoxin family signature 22 30 5.0E-9 T 13-10-2018 Theam_1475 cd584bbe7e268a14a64e192914769647 108 Gene3D G3DSA:3.40.30.10 1 106 2.6E-35 T 13-10-2018 Theam_1475 cd584bbe7e268a14a64e192914769647 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 104 1.1E-38 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Theam_1475 cd584bbe7e268a14a64e192914769647 108 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Theam_1475 cd584bbe7e268a14a64e192914769647 108 Pfam PF00085 Thioredoxin 7 103 1.9E-32 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 Theam_1475 cd584bbe7e268a14a64e192914769647 108 SUPERFAMILY SSF52833 7 107 1.23E-39 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Theam_1475 cd584bbe7e268a14a64e192914769647 108 PIRSF PIRSF000077 1 106 8.0E-41 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Theam_0345 bd84d61c8f7a5ffc14254ffdcc93ab04 366 SUPERFAMILY SSF51713 1 363 5.62E-157 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Theam_0345 bd84d61c8f7a5ffc14254ffdcc93ab04 366 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 359 1.2E-94 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Theam_0345 bd84d61c8f7a5ffc14254ffdcc93ab04 366 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 362 55.211 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Theam_0345 bd84d61c8f7a5ffc14254ffdcc93ab04 366 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 363 1.4E-154 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Theam_0345 bd84d61c8f7a5ffc14254ffdcc93ab04 366 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 363 5.2E-157 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Theam_0345 bd84d61c8f7a5ffc14254ffdcc93ab04 366 Gene3D G3DSA:3.20.20.105 1 365 1.0E-168 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 SUPERFAMILY SSF46689 342 450 1.08E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 Pfam PF00158 Sigma-54 interaction domain 128 295 3.4E-77 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 Pfam PF02954 Bacterial regulatory protein, Fis family 410 448 3.0E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 SMART SM00382 148 295 2.9E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 Gene3D G3DSA:1.10.8.60 299 363 6.8E-26 T 13-10-2018 Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 Gene3D G3DSA:3.40.50.2300 1 121 5.5E-38 T 13-10-2018 Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 Gene3D G3DSA:3.40.50.300 122 298 9.7E-72 T 13-10-2018 Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 152 165 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 Pfam PF00072 Response regulator receiver domain 4 108 8.7E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 214 229 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 341 350 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 SUPERFAMILY SSF52172 1 173 2.85E-46 T 13-10-2018 IPR011006 CheY-like superfamily Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 414 431 4.8E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 431 451 4.8E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 Gene3D G3DSA:1.10.10.60 364 450 2.8E-20 T 13-10-2018 Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 SMART SM00448 2 109 3.3E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_1102 9d08b0ab67bff013080fdeb666e315eb 452 SUPERFAMILY SSF52540 127 370 8.11E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0457 3fe23dcb1bc90a3522c05f06e8908f95 216 Gene3D G3DSA:1.10.3130.10 1 66 2.7E-27 T 13-10-2018 Theam_0457 3fe23dcb1bc90a3522c05f06e8908f95 216 PIRSF PIRSF000441 1 216 2.6E-94 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Theam_0457 3fe23dcb1bc90a3522c05f06e8908f95 216 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 4.7E-81 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Theam_0457 3fe23dcb1bc90a3522c05f06e8908f95 216 SUPERFAMILY SSF51161 2 171 1.8E-63 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Theam_0457 3fe23dcb1bc90a3522c05f06e8908f95 216 Pfam PF06426 Serine acetyltransferase, N-terminal 3 35 1.8E-5 T 13-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Theam_0457 3fe23dcb1bc90a3522c05f06e8908f95 216 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 2.0E-4 T 13-10-2018 IPR001451 Hexapeptide repeat Theam_0457 3fe23dcb1bc90a3522c05f06e8908f95 216 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 150 3.3E-11 T 13-10-2018 IPR001451 Hexapeptide repeat Theam_0457 3fe23dcb1bc90a3522c05f06e8908f95 216 Gene3D G3DSA:2.160.10.10 67 183 3.7E-41 T 13-10-2018 Theam_0474 0143468d0ce9b58611dec49d32f17389 423 Pfam PF03471 Transporter associated domain 344 422 1.8E-21 T 13-10-2018 IPR005170 Transporter-associated domain Theam_0474 0143468d0ce9b58611dec49d32f17389 423 SMART SM00116 279 327 1.4 T 13-10-2018 IPR000644 CBS domain Theam_0474 0143468d0ce9b58611dec49d32f17389 423 SMART SM00116 215 264 5.8 T 13-10-2018 IPR000644 CBS domain Theam_0474 0143468d0ce9b58611dec49d32f17389 423 Pfam PF00571 CBS domain 206 260 0.001 T 13-10-2018 IPR000644 CBS domain Theam_0474 0143468d0ce9b58611dec49d32f17389 423 Pfam PF00571 CBS domain 278 327 3.4E-8 T 13-10-2018 IPR000644 CBS domain Theam_0474 0143468d0ce9b58611dec49d32f17389 423 SUPERFAMILY SSF54631 201 337 2.65E-31 T 13-10-2018 Theam_0474 0143468d0ce9b58611dec49d32f17389 423 Pfam PF01595 Domain of unknown function DUF21 15 191 7.4E-44 T 13-10-2018 IPR002550 CNNM, transmembrane domain Theam_0474 0143468d0ce9b58611dec49d32f17389 423 Gene3D G3DSA:3.30.465.10 336 420 6.1E-23 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Theam_0474 0143468d0ce9b58611dec49d32f17389 423 Gene3D G3DSA:3.10.580.10 186 335 8.6E-45 T 13-10-2018 Theam_0474 0143468d0ce9b58611dec49d32f17389 423 SMART SM01091 343 423 5.6E-26 T 13-10-2018 IPR005170 Transporter-associated domain Theam_0474 0143468d0ce9b58611dec49d32f17389 423 SUPERFAMILY SSF56176 339 421 8.72E-19 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Theam_1107 63aff61f17af1c6622e84a749ffe2761 259 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 4 257 1.0E-74 T 13-10-2018 Theam_1107 63aff61f17af1c6622e84a749ffe2761 259 SUPERFAMILY SSF56219 4 258 1.16E-71 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Theam_1107 63aff61f17af1c6622e84a749ffe2761 259 Gene3D G3DSA:3.60.10.10 3 258 7.2E-71 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Theam_1107 63aff61f17af1c6622e84a749ffe2761 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 4 257 9.4E-72 T 13-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Theam_1107 63aff61f17af1c6622e84a749ffe2761 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 250 3.0E-17 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Theam_1370 2e6c457362b85fe20d2627833ef27566 442 SUPERFAMILY SSF46689 345 434 1.21E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Theam_1370 2e6c457362b85fe20d2627833ef27566 442 Pfam PF00072 Response regulator receiver domain 3 111 4.1E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_1370 2e6c457362b85fe20d2627833ef27566 442 Pfam PF02954 Bacterial regulatory protein, Fis family 395 433 9.4E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Theam_1370 2e6c457362b85fe20d2627833ef27566 442 Pfam PF00158 Sigma-54 interaction domain 132 297 1.4E-73 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Theam_1370 2e6c457362b85fe20d2627833ef27566 442 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 217 232 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Theam_1370 2e6c457362b85fe20d2627833ef27566 442 SUPERFAMILY SSF52172 2 176 2.28E-42 T 13-10-2018 IPR011006 CheY-like superfamily Theam_1370 2e6c457362b85fe20d2627833ef27566 442 Gene3D G3DSA:3.40.50.300 119 301 4.0E-68 T 13-10-2018 Theam_1370 2e6c457362b85fe20d2627833ef27566 442 SMART SM00448 1 112 4.9E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_1370 2e6c457362b85fe20d2627833ef27566 442 SMART SM00382 151 294 1.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1370 2e6c457362b85fe20d2627833ef27566 442 SUPERFAMILY SSF52540 131 370 6.19E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1370 2e6c457362b85fe20d2627833ef27566 442 Gene3D G3DSA:1.10.10.60 380 436 1.5E-10 T 13-10-2018 Theam_1370 2e6c457362b85fe20d2627833ef27566 442 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 155 168 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Theam_1370 2e6c457362b85fe20d2627833ef27566 442 Gene3D G3DSA:1.10.8.60 302 368 5.8E-22 T 13-10-2018 Theam_1370 2e6c457362b85fe20d2627833ef27566 442 Gene3D G3DSA:3.40.50.2300 2 118 2.3E-34 T 13-10-2018 Theam_1370 2e6c457362b85fe20d2627833ef27566 442 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 418 438 4.3E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Theam_1370 2e6c457362b85fe20d2627833ef27566 442 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 401 418 4.3E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Theam_1479 2e58f64c469748b22c9d536b1e49afa0 365 Gene3D G3DSA:3.30.360.10 196 305 3.3E-123 T 13-10-2018 Theam_1479 2e58f64c469748b22c9d536b1e49afa0 365 PIRSF PIRSF015578 1 364 2.3E-94 T 13-10-2018 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 Theam_1479 2e58f64c469748b22c9d536b1e49afa0 365 Gene3D G3DSA:3.40.50.720 5 358 3.3E-123 T 13-10-2018 Theam_1479 2e58f64c469748b22c9d536b1e49afa0 365 SUPERFAMILY SSF51735 4 361 4.5E-89 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_1479 2e58f64c469748b22c9d536b1e49afa0 365 SUPERFAMILY SSF55347 195 305 7.85E-36 T 13-10-2018 Theam_1479 2e58f64c469748b22c9d536b1e49afa0 365 Pfam PF01658 Myo-inositol-1-phosphate synthase 197 305 2.8E-32 T 13-10-2018 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 Theam_1619 66fe68385c13f134a5fe56b9574cb0ef 747 SUPERFAMILY SSF52540 257 559 2.65E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1619 66fe68385c13f134a5fe56b9574cb0ef 747 SUPERFAMILY SSF109604 12 113 2.97E-7 T 13-10-2018 Theam_1619 66fe68385c13f134a5fe56b9574cb0ef 747 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 260 592 1.7E-74 T 13-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core Theam_1619 66fe68385c13f134a5fe56b9574cb0ef 747 Pfam PF01966 HD domain 18 114 5.1E-6 T 13-10-2018 IPR006674 HD domain Theam_1619 66fe68385c13f134a5fe56b9574cb0ef 747 Pfam PF00270 DEAD/DEAH box helicase 255 416 2.2E-6 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Theam_1619 66fe68385c13f134a5fe56b9574cb0ef 747 Gene3D G3DSA:1.10.3210.30 6 193 2.6E-22 T 13-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily Theam_1619 66fe68385c13f134a5fe56b9574cb0ef 747 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 16 211 3.0E-27 T 13-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain Theam_1619 66fe68385c13f134a5fe56b9574cb0ef 747 Gene3D G3DSA:3.40.50.300 248 382 9.7E-10 T 13-10-2018 Theam_1619 66fe68385c13f134a5fe56b9574cb0ef 747 SMART SM00490 476 558 3.0E-7 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_1619 66fe68385c13f134a5fe56b9574cb0ef 747 Pfam PF00271 Helicase conserved C-terminal domain 453 556 1.1E-7 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_1619 66fe68385c13f134a5fe56b9574cb0ef 747 Gene3D G3DSA:3.40.50.300 431 584 1.1E-15 T 13-10-2018 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 3.4E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 3.4E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 3.4E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 3.4E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 3.4E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 3.4E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 3.4E-41 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 SUPERFAMILY SSF82693 145 312 1.62E-10 T 13-10-2018 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 SUPERFAMILY SSF82866 809 1024 6.28E-43 T 13-10-2018 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 Gene3D G3DSA:3.30.2090.10 717 805 2.2E-264 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 SUPERFAMILY SSF82693 563 662 5.75E-9 T 13-10-2018 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 Gene3D G3DSA:3.30.70.1430 564 665 2.2E-264 T 13-10-2018 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 Gene3D G3DSA:3.30.70.1440 666 862 2.2E-264 T 13-10-2018 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 Pfam PF00873 AcrB/AcrD/AcrF family 6 1022 9.8E-208 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 SUPERFAMILY SSF82714 187 264 9.42E-10 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 SUPERFAMILY SSF82866 295 485 9.68E-37 T 13-10-2018 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 Gene3D G3DSA:1.20.1640.10 11 504 2.2E-264 T 13-10-2018 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 Gene3D G3DSA:3.30.70.1430 41 813 2.2E-264 T 13-10-2018 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 Gene3D G3DSA:3.30.2090.10 182 268 2.2E-264 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 Gene3D G3DSA:3.30.70.1320 135 324 2.2E-264 T 13-10-2018 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 SUPERFAMILY SSF82714 719 802 2.49E-6 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 Gene3D G3DSA:1.20.1640.10 505 1018 2.2E-264 T 13-10-2018 Theam_0065 4dfe00ebe7f7ffbb05207a5ec98f395a 1036 SUPERFAMILY SSF82693 43 132 6.45E-25 T 13-10-2018 Theam_1377 33a570ef41583fc3155830f607f03336 663 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 361 494 1.5E-39 T 13-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Theam_1377 33a570ef41583fc3155830f607f03336 663 Pfam PF13549 ATP-grasp domain 3 198 3.2E-38 T 13-10-2018 Theam_1377 33a570ef41583fc3155830f607f03336 663 Pfam PF13380 CoA binding domain 221 344 1.7E-25 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Theam_1377 33a570ef41583fc3155830f607f03336 663 Gene3D G3DSA:3.40.50.261 500 655 9.4E-41 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Theam_1377 33a570ef41583fc3155830f607f03336 663 Gene3D G3DSA:3.40.50.720 215 339 2.5E-47 T 13-10-2018 Theam_1377 33a570ef41583fc3155830f607f03336 663 SUPERFAMILY SSF52210 339 498 1.57E-34 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Theam_1377 33a570ef41583fc3155830f607f03336 663 SUPERFAMILY SSF51735 216 340 1.67E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_1377 33a570ef41583fc3155830f607f03336 663 Gene3D G3DSA:3.30.470.20 3 198 4.7E-46 T 13-10-2018 Theam_1377 33a570ef41583fc3155830f607f03336 663 Gene3D G3DSA:3.40.50.261 340 497 9.1E-47 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Theam_1377 33a570ef41583fc3155830f607f03336 663 SUPERFAMILY SSF52210 501 647 9.55E-28 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Theam_1377 33a570ef41583fc3155830f607f03336 663 SUPERFAMILY SSF56059 3 200 1.08E-27 T 13-10-2018 Theam_1377 33a570ef41583fc3155830f607f03336 663 SMART SM00881 217 310 1.6E-40 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Theam_1377 33a570ef41583fc3155830f607f03336 663 Gene3D G3DSA:3.30.1490.20 21 87 4.7E-46 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 353 366 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 Gene3D G3DSA:1.10.601.10 78 401 3.0E-85 T 13-10-2018 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 522 548 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 1 562 32.496 T 13-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 SUPERFAMILY SSF88659 402 475 1.0E-20 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 PRINTS PR00046 Major sigma-70 factor signature 377 385 7.6E-29 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 PRINTS PR00046 Major sigma-70 factor signature 522 537 7.6E-29 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 PRINTS PR00046 Major sigma-70 factor signature 537 548 7.6E-29 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 PRINTS PR00046 Major sigma-70 factor signature 353 366 7.6E-29 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 PRINTS PR00046 Major sigma-70 factor signature 501 513 7.6E-29 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 SUPERFAMILY SSF88946 97 396 1.06E-64 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 325 560 3.4E-114 T 13-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 Gene3D G3DSA:1.10.220.120 2 59 4.2E-13 T 13-10-2018 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 Pfam PF04539 Sigma-70 region 3 408 483 6.3E-28 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 Gene3D G3DSA:1.10.10.10 402 477 3.0E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 Gene3D G3DSA:1.10.10.10 479 562 3.1E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 Pfam PF03979 Sigma-70 factor, region 1.1 7 60 2.1E-13 T 13-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 Pfam PF00140 Sigma-70 factor, region 1.2 80 113 7.9E-11 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 327 550 8.2E-37 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 Pfam PF04545 Sigma-70, region 4 497 550 1.8E-18 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 SUPERFAMILY SSF88659 459 551 3.92E-26 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Theam_0725 274ae8b14cdad0788b5afec3dca874f9 563 Pfam PF04542 Sigma-70 region 2 329 398 4.2E-21 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Theam_0253 a860bfa44b970a7e2be60fe072d1b018 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 13-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0253 a860bfa44b970a7e2be60fe072d1b018 156 Gene3D G3DSA:1.10.455.10 2 156 1.3E-68 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Theam_0253 a860bfa44b970a7e2be60fe072d1b018 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 5.5E-69 T 13-10-2018 IPR023798 Ribosomal protein S7 domain Theam_0253 a860bfa44b970a7e2be60fe072d1b018 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.1E-70 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Theam_0253 a860bfa44b970a7e2be60fe072d1b018 156 SUPERFAMILY SSF47973 1 149 5.89E-65 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Theam_0253 a860bfa44b970a7e2be60fe072d1b018 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.469 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Theam_0253 a860bfa44b970a7e2be60fe072d1b018 156 PIRSF PIRSF002122 4 156 2.4E-68 T 13-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Theam_0473 068ac335496d1cdb4839148f15cc1ae9 490 PRINTS PR00701 60kDa inner membrane protein signature 65 86 1.4E-17 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Theam_0473 068ac335496d1cdb4839148f15cc1ae9 490 PRINTS PR00701 60kDa inner membrane protein signature 450 473 1.4E-17 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Theam_0473 068ac335496d1cdb4839148f15cc1ae9 490 PRINTS PR00701 60kDa inner membrane protein signature 415 437 1.4E-17 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Theam_0473 068ac335496d1cdb4839148f15cc1ae9 490 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 13 305 3.2E-25 T 13-10-2018 IPR028053 Membrane insertase YidC, N-terminal Theam_0473 068ac335496d1cdb4839148f15cc1ae9 490 PRINTS PR01900 YidC translocation/secretion protein signature 293 309 2.5E-17 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Theam_0473 068ac335496d1cdb4839148f15cc1ae9 490 PRINTS PR01900 YidC translocation/secretion protein signature 439 463 2.5E-17 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Theam_0473 068ac335496d1cdb4839148f15cc1ae9 490 PRINTS PR01900 YidC translocation/secretion protein signature 421 436 2.5E-17 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Theam_0473 068ac335496d1cdb4839148f15cc1ae9 490 Pfam PF02096 60Kd inner membrane protein 308 483 5.5E-61 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Theam_0473 068ac335496d1cdb4839148f15cc1ae9 490 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 7 486 18.567 T 13-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 Theam_0473 068ac335496d1cdb4839148f15cc1ae9 490 Gene3D G3DSA:2.70.98.90 56 248 1.5E-6 T 13-10-2018 IPR038221 YidC, periplasmic domain superfamily Theam_0473 068ac335496d1cdb4839148f15cc1ae9 490 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 307 483 6.2E-69 T 13-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0473 068ac335496d1cdb4839148f15cc1ae9 490 Pfam PF14849 YidC periplasmic domain 60 296 1.8E-16 T 13-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain Theam_0718 501a582889489d6ff9c9942714fa980e 541 SUPERFAMILY SSF52540 4 267 5.32E-118 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0718 501a582889489d6ff9c9942714fa980e 541 Gene3D G3DSA:3.40.50.300 1 287 1.4E-129 T 13-10-2018 Theam_0718 501a582889489d6ff9c9942714fa980e 541 Gene3D G3DSA:3.40.50.880 288 540 1.1E-109 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Theam_0718 501a582889489d6ff9c9942714fa980e 541 Pfam PF06418 CTP synthase N-terminus 4 267 1.3E-124 T 13-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Theam_0718 501a582889489d6ff9c9942714fa980e 541 TIGRFAM TIGR00337 PyrG: CTP synthase 2 529 1.3E-252 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Theam_0718 501a582889489d6ff9c9942714fa980e 541 SUPERFAMILY SSF52317 292 535 1.06E-86 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Theam_0718 501a582889489d6ff9c9942714fa980e 541 Pfam PF00117 Glutamine amidotransferase class-I 304 529 4.3E-60 T 13-10-2018 IPR017926 Glutamine amidotransferase Theam_0718 501a582889489d6ff9c9942714fa980e 541 Hamap MF_01227 CTP synthase [pyrG]. 3 534 52.78 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Theam_0749 974eacc3203e9e493f4fece1b1f5cafe 423 Pfam PF00990 Diguanylate cyclase, GGDEF domain 262 419 1.6E-41 T 13-10-2018 IPR000160 GGDEF domain Theam_0749 974eacc3203e9e493f4fece1b1f5cafe 423 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 259 421 7.3E-47 T 13-10-2018 IPR000160 GGDEF domain Theam_0749 974eacc3203e9e493f4fece1b1f5cafe 423 SUPERFAMILY SSF55073 266 422 8.63E-41 T 13-10-2018 IPR029787 Nucleotide cyclase Theam_0749 974eacc3203e9e493f4fece1b1f5cafe 423 Gene3D G3DSA:3.30.70.270 255 423 2.2E-49 T 13-10-2018 Theam_0749 974eacc3203e9e493f4fece1b1f5cafe 423 SMART SM00267 250 423 1.0E-46 T 13-10-2018 IPR000160 GGDEF domain Theam_1238 c02e314b6c2077e31fac0e2d872ec2b9 303 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 193 290 8.1E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_1238 c02e314b6c2077e31fac0e2d872ec2b9 303 SUPERFAMILY SSF47384 81 148 2.35E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Theam_1238 c02e314b6c2077e31fac0e2d872ec2b9 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 254 272 4.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1238 c02e314b6c2077e31fac0e2d872ec2b9 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 242 252 4.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1238 c02e314b6c2077e31fac0e2d872ec2b9 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 224 238 4.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1238 c02e314b6c2077e31fac0e2d872ec2b9 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 278 291 4.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1238 c02e314b6c2077e31fac0e2d872ec2b9 303 Pfam PF00512 His Kinase A (phospho-acceptor) domain 90 144 3.6E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Theam_1238 c02e314b6c2077e31fac0e2d872ec2b9 303 SMART SM00387 192 294 1.1E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_1238 c02e314b6c2077e31fac0e2d872ec2b9 303 SMART SM00388 89 153 1.9E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Theam_1238 c02e314b6c2077e31fac0e2d872ec2b9 303 Gene3D G3DSA:1.10.287.130 81 148 5.1E-11 T 13-10-2018 Theam_1238 c02e314b6c2077e31fac0e2d872ec2b9 303 SUPERFAMILY SSF55874 153 291 6.42E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_1238 c02e314b6c2077e31fac0e2d872ec2b9 303 Gene3D G3DSA:3.30.565.10 149 291 3.2E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_0976 a282510d32a69e1361cd0e9269026d82 830 SUPERFAMILY SSF53448 1 235 2.6E-76 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0976 a282510d32a69e1361cd0e9269026d82 830 SUPERFAMILY SSF53738 378 519 3.92E-23 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0976 a282510d32a69e1361cd0e9269026d82 830 SUPERFAMILY SSF53738 692 739 2.59E-5 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0976 a282510d32a69e1361cd0e9269026d82 830 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 534 631 8.7E-13 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0976 a282510d32a69e1361cd0e9269026d82 830 Gene3D G3DSA:2.160.10.10 251 384 7.7E-19 T 13-10-2018 Theam_0976 a282510d32a69e1361cd0e9269026d82 830 Pfam PF00483 Nucleotidyl transferase 2 233 4.4E-49 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Theam_0976 a282510d32a69e1361cd0e9269026d82 830 Gene3D G3DSA:3.40.120.10 385 529 2.7E-25 T 13-10-2018 Theam_0976 a282510d32a69e1361cd0e9269026d82 830 Gene3D G3DSA:3.90.550.10 1 243 3.9E-71 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0976 a282510d32a69e1361cd0e9269026d82 830 Gene3D G3DSA:3.40.120.10 546 731 1.5E-25 T 13-10-2018 Theam_0976 a282510d32a69e1361cd0e9269026d82 830 SUPERFAMILY SSF53738 533 635 1.29E-10 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0976 a282510d32a69e1361cd0e9269026d82 830 SUPERFAMILY SSF51161 199 371 2.36E-25 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Theam_0976 a282510d32a69e1361cd0e9269026d82 830 SUPERFAMILY SSF55957 744 827 2.35E-8 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0976 a282510d32a69e1361cd0e9269026d82 830 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 386 515 4.6E-22 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0976 a282510d32a69e1361cd0e9269026d82 830 Gene3D G3DSA:3.40.120.10 634 736 1.5E-25 T 13-10-2018 Theam_0976 a282510d32a69e1361cd0e9269026d82 830 Gene3D G3DSA:3.30.310.50 746 828 3.9E-7 T 13-10-2018 Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 Gene3D G3DSA:1.10.268.10 364 452 4.6E-215 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 4 802 0.0 T 13-10-2018 Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 SUPERFAMILY SSF56719 26 482 1.57E-179 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 Gene3D G3DSA:2.120.10.90 490 803 1.4E-115 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 SUPERFAMILY SSF101904 493 808 1.7E-99 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 28 465 1.0E-160 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 500 543 1.9E-11 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 653 699 2.2E-16 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 757 801 2.6E-12 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 548 576 8.5E-6 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 606 650 4.0E-11 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 706 749 1.7E-10 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 7 677 3.5E-190 T 13-10-2018 Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 Gene3D G3DSA:3.90.199.10 28 481 4.6E-215 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 SMART SM00434 7 459 5.6E-278 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 Gene3D G3DSA:3.30.1360.40 232 327 4.6E-215 T 13-10-2018 Theam_1141 1e34d53e21af9d3e68eb37914d3e46f4 809 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 803 23.798 T 13-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Theam_0330 1a496229f991a4bea88ce5687705368b 147 Gene3D G3DSA:2.40.50.140 73 147 2.1E-15 T 13-10-2018 Theam_0330 1a496229f991a4bea88ce5687705368b 147 Pfam PF01957 NfeD-like C-terminal, partner-binding 11 144 5.4E-10 T 13-10-2018 IPR002810 NfeD-like, C-terminal domain Theam_0330 1a496229f991a4bea88ce5687705368b 147 SUPERFAMILY SSF141322 113 143 7.98E-7 T 13-10-2018 Theam_0462 9356eb0630c12a261e6c9ab6d690d3c9 428 Pfam PF04715 Anthranilate synthase component I, N terminal region 10 131 9.0E-18 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Theam_0462 9356eb0630c12a261e6c9ab6d690d3c9 428 PRINTS PR00095 Anthranilate synthase component I signature 373 387 5.1E-19 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Theam_0462 9356eb0630c12a261e6c9ab6d690d3c9 428 PRINTS PR00095 Anthranilate synthase component I signature 358 372 5.1E-19 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Theam_0462 9356eb0630c12a261e6c9ab6d690d3c9 428 PRINTS PR00095 Anthranilate synthase component I signature 278 291 5.1E-19 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Theam_0462 9356eb0630c12a261e6c9ab6d690d3c9 428 PRINTS PR00095 Anthranilate synthase component I signature 264 277 5.1E-19 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Theam_0462 9356eb0630c12a261e6c9ab6d690d3c9 428 SUPERFAMILY SSF56322 6 425 3.14E-138 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Theam_0462 9356eb0630c12a261e6c9ab6d690d3c9 428 Gene3D G3DSA:3.60.120.10 2 427 4.3E-146 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Theam_0462 9356eb0630c12a261e6c9ab6d690d3c9 428 Pfam PF00425 chorismate binding enzyme 163 416 1.4E-97 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 SMART SM00738 3 180 1.6E-27 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 SUPERFAMILY SSF82004 45 126 1.06E-11 T 13-10-2018 Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 Gene3D G3DSA:3.30.70.940 3 182 6.2E-97 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 Pfam PF02357 Transcription termination factor nusG 4 176 2.4E-23 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 SUPERFAMILY SSF82679 106 180 1.83E-14 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 6 245 6.9E-52 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 Gene3D G3DSA:2.30.30.30 187 245 3.7E-24 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 Pfam PF00467 KOW motif 195 224 9.3E-6 T 13-10-2018 IPR005824 KOW Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 SUPERFAMILY SSF50104 189 245 1.5E-18 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 Gene3D G3DSA:2.60.320.10 43 127 6.2E-97 T 13-10-2018 IPR038690 NusG, domain 2 superfamily Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 3 245 22.063 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 Pfam PF07009 NusG domain II 46 125 1.8E-10 T 13-10-2018 IPR024045 NusG, domain 2 Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 SMART SM00739 191 218 4.0E-6 T 13-10-2018 IPR005824 KOW Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 SUPERFAMILY SSF82679 3 57 1.83E-10 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 PRINTS PR00338 Transcription termination factor NUSG signature 221 237 2.3E-15 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 PRINTS PR00338 Transcription termination factor NUSG signature 203 218 2.3E-15 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Theam_1584 2aef473df6e41cdcf36f484cd698a50f 246 PRINTS PR00338 Transcription termination factor NUSG signature 127 139 2.3E-15 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Theam_1099 54f8bf57ecd74bd68ec7a7e77d35b140 239 Gene3D G3DSA:3.40.1280.10 72 236 2.3E-46 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Theam_1099 54f8bf57ecd74bd68ec7a7e77d35b140 239 Gene3D G3DSA:3.30.1330.30 1 71 4.3E-12 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like Theam_1099 54f8bf57ecd74bd68ec7a7e77d35b140 239 SUPERFAMILY SSF55315 1 71 4.94E-15 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like Theam_1099 54f8bf57ecd74bd68ec7a7e77d35b140 239 SUPERFAMILY SSF75217 63 236 6.8E-42 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Theam_1099 54f8bf57ecd74bd68ec7a7e77d35b140 239 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 235 6.6E-63 T 13-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Theam_1099 54f8bf57ecd74bd68ec7a7e77d35b140 239 SMART SM00967 2 75 3.4E-19 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Theam_1099 54f8bf57ecd74bd68ec7a7e77d35b140 239 Pfam PF00588 SpoU rRNA Methylase family 92 229 6.3E-37 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Theam_1099 54f8bf57ecd74bd68ec7a7e77d35b140 239 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 2 74 1.0E-19 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Theam_1713 7c6a15114db15a994097f27fc319ef34 196 Pfam PF09335 SNARE associated Golgi protein 37 154 3.2E-11 T 13-10-2018 IPR032816 SNARE associated Golgi protein Theam_1069 e964dc729432ca60e605b560d9f24f4e 314 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 4 305 2.4E-106 T 13-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 Theam_1069 e964dc729432ca60e605b560d9f24f4e 314 Gene3D G3DSA:3.40.50.720 4 287 2.3E-95 T 13-10-2018 Theam_1069 e964dc729432ca60e605b560d9f24f4e 314 SUPERFAMILY SSF51735 1 310 4.62E-75 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_1069 e964dc729432ca60e605b560d9f24f4e 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 235 7.3E-45 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Theam_1069 e964dc729432ca60e605b560d9f24f4e 314 Gene3D G3DSA:3.90.25.10 168 296 2.3E-95 T 13-10-2018 Theam_1004 5a2ba54ad8ddaf082cdab57f80a733db 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 2 149 8.0E-19 T 13-10-2018 IPR000160 GGDEF domain Theam_1004 5a2ba54ad8ddaf082cdab57f80a733db 407 SMART SM00267 2 154 1.8E-13 T 13-10-2018 IPR000160 GGDEF domain Theam_1004 5a2ba54ad8ddaf082cdab57f80a733db 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 2 152 1.7E-18 T 13-10-2018 IPR000160 GGDEF domain Theam_1004 5a2ba54ad8ddaf082cdab57f80a733db 407 SMART SM00052 164 399 1.8E-46 T 13-10-2018 IPR001633 EAL domain Theam_1004 5a2ba54ad8ddaf082cdab57f80a733db 407 Pfam PF00563 EAL domain 170 394 3.9E-54 T 13-10-2018 IPR001633 EAL domain Theam_1004 5a2ba54ad8ddaf082cdab57f80a733db 407 SUPERFAMILY SSF141868 170 398 2.62E-59 T 13-10-2018 IPR035919 EAL domain superfamily Theam_1004 5a2ba54ad8ddaf082cdab57f80a733db 407 Gene3D G3DSA:3.30.70.270 1 166 2.5E-28 T 13-10-2018 Theam_1004 5a2ba54ad8ddaf082cdab57f80a733db 407 SUPERFAMILY SSF55073 6 155 7.3E-25 T 13-10-2018 IPR029787 Nucleotide cyclase Theam_1004 5a2ba54ad8ddaf082cdab57f80a733db 407 Gene3D G3DSA:3.20.20.450 167 401 1.6E-59 T 13-10-2018 IPR035919 EAL domain superfamily Theam_0636 a134000409ff915b4950d28030db19b2 298 Pfam PF14332 Domain of unknown function (DUF4388) 13 119 7.4E-12 T 13-10-2018 IPR025497 Domain of unknown function DUF4388 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 Gene3D G3DSA:1.10.3060.10 632 849 9.2E-69 T 13-10-2018 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 SUPERFAMILY SSF81886 631 861 5.89E-71 T 13-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Theam_1081 0e32134602d8ea812b416af2358de0b1 869 Pfam PF01043 SecA preprotein cross-linking domain 240 353 4.2E-40 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 836 0.0 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 Gene3D G3DSA:3.40.50.300 22 410 2.4E-181 T 13-10-2018 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 PRINTS PR00906 SecA protein signature 177 197 1.2E-73 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 PRINTS PR00906 SecA protein signature 408 421 1.2E-73 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 PRINTS PR00906 SecA protein signature 108 122 1.2E-73 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 PRINTS PR00906 SecA protein signature 334 356 1.2E-73 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 PRINTS PR00906 SecA protein signature 70 94 1.2E-73 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 PRINTS PR00906 SecA protein signature 371 388 1.2E-73 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 PRINTS PR00906 SecA protein signature 124 134 1.2E-73 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 Gene3D G3DSA:3.90.1440.10 236 363 2.4E-181 T 13-10-2018 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 850 20.372 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 SUPERFAMILY SSF52540 5 410 1.43E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1081 0e32134602d8ea812b416af2358de0b1 869 SMART SM00958 235 353 5.6E-67 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 ProSitePatterns PS01312 SecA family signature. 495 510 - T 13-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 SUPERFAMILY SSF81767 234 363 6.02E-45 T 13-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 SUPERFAMILY SSF52540 412 629 2.55E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1081 0e32134602d8ea812b416af2358de0b1 869 SMART SM00957 6 397 1.6E-284 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 Pfam PF07517 SecA DEAD-like domain 7 397 1.1E-134 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 Pfam PF07516 SecA Wing and Scaffold domain 628 846 9.0E-66 T 13-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Theam_1081 0e32134602d8ea812b416af2358de0b1 869 Gene3D G3DSA:3.40.50.300 412 630 4.7E-98 T 13-10-2018 Theam_1329 c72795be1d054be7709329c7235177b4 116 SUPERFAMILY SSF48695 33 107 1.35E-17 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_1329 c72795be1d054be7709329c7235177b4 116 Gene3D G3DSA:3.90.10.10 29 108 3.9E-18 T 13-10-2018 Theam_1329 c72795be1d054be7709329c7235177b4 116 TIGRFAM TIGR04257 nanowire_3heme: c(7)-type cytochrome triheme domain 31 107 2.9E-23 T 13-10-2018 IPR026352 C(7)-type cytochrome triheme domain Theam_1329 c72795be1d054be7709329c7235177b4 116 Pfam PF14522 Cytochrome c7 and related cytochrome c 41 107 1.7E-12 T 13-10-2018 IPR029467 C-type polyheme cytochrome OmcB Theam_0455 11fc9a8b1d5cc286e8a1caf0061e6ce1 359 ProSitePatterns PS01348 MraY family signature 2. 182 193 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Theam_0455 11fc9a8b1d5cc286e8a1caf0061e6ce1 359 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 21 357 23.867 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Theam_0455 11fc9a8b1d5cc286e8a1caf0061e6ce1 359 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 36 359 8.9E-117 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Theam_0455 11fc9a8b1d5cc286e8a1caf0061e6ce1 359 Pfam PF00953 Glycosyl transferase family 4 95 277 8.5E-36 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Theam_0455 11fc9a8b1d5cc286e8a1caf0061e6ce1 359 ProSitePatterns PS01347 MraY family signature 1. 64 76 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Theam_1458 87c59904b6fec9e029086a90b29da85d 383 SMART SM00962 189 382 4.7E-49 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Theam_1458 87c59904b6fec9e029086a90b29da85d 383 Pfam PF00448 SRP54-type protein, GTPase domain 190 380 1.7E-33 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Theam_1458 87c59904b6fec9e029086a90b29da85d 383 SUPERFAMILY SSF52540 184 381 1.16E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1458 87c59904b6fec9e029086a90b29da85d 383 Gene3D G3DSA:1.20.120.1380 128 373 4.9E-53 T 13-10-2018 Theam_1458 87c59904b6fec9e029086a90b29da85d 383 Gene3D G3DSA:3.40.50.300 184 370 4.9E-53 T 13-10-2018 Theam_0850 78fdacb343fd5368a102f47cb0965add 413 Pfam PF14450 Cell division protein FtsA 212 368 7.5E-12 T 13-10-2018 Theam_0850 78fdacb343fd5368a102f47cb0965add 413 PIRSF PIRSF003101 1 411 1.0E-63 T 13-10-2018 IPR020823 Cell division protein FtsA Theam_0850 78fdacb343fd5368a102f47cb0965add 413 Pfam PF02491 SHS2 domain inserted in FTSA 82 165 8.5E-14 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Theam_0850 78fdacb343fd5368a102f47cb0965add 413 Gene3D G3DSA:3.30.1490.110 81 173 1.2E-59 T 13-10-2018 Theam_0850 78fdacb343fd5368a102f47cb0965add 413 SUPERFAMILY SSF53067 209 361 9.36E-18 T 13-10-2018 Theam_0850 78fdacb343fd5368a102f47cb0965add 413 SUPERFAMILY SSF53067 9 199 4.07E-29 T 13-10-2018 Theam_0850 78fdacb343fd5368a102f47cb0965add 413 Gene3D G3DSA:3.30.420.40 201 355 1.2E-59 T 13-10-2018 Theam_0850 78fdacb343fd5368a102f47cb0965add 413 SMART SM00842 6 200 1.6E-29 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Theam_0850 78fdacb343fd5368a102f47cb0965add 413 Gene3D G3DSA:3.90.640.10 239 302 1.2E-59 T 13-10-2018 Theam_0850 78fdacb343fd5368a102f47cb0965add 413 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 6 359 5.4E-53 T 13-10-2018 IPR020823 Cell division protein FtsA Theam_0850 78fdacb343fd5368a102f47cb0965add 413 Gene3D G3DSA:3.30.420.40 9 365 1.2E-59 T 13-10-2018 Theam_1692 87c57e1b7a38aff4def7307cb1356400 295 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 277 34.492 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Theam_1692 87c57e1b7a38aff4def7307cb1356400 295 Gene3D G3DSA:3.40.1010.20 96 187 6.6E-101 T 13-10-2018 Theam_1692 87c57e1b7a38aff4def7307cb1356400 295 Pfam PF02401 LytB protein 3 273 1.1E-94 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Theam_1692 87c57e1b7a38aff4def7307cb1356400 295 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 275 8.7E-95 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Theam_1692 87c57e1b7a38aff4def7307cb1356400 295 Gene3D G3DSA:3.40.1010.20 3 273 6.6E-101 T 13-10-2018 Theam_1692 87c57e1b7a38aff4def7307cb1356400 295 Gene3D G3DSA:3.40.50.11270 12 95 6.6E-101 T 13-10-2018 Theam_1298 76b8bc7a49d4f54f6d0baf33bdd1fac9 76 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 74 5.8E-30 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1298 76b8bc7a49d4f54f6d0baf33bdd1fac9 76 SUPERFAMILY SSF54565 2 74 1.02E-26 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1298 76b8bc7a49d4f54f6d0baf33bdd1fac9 76 Pfam PF00886 Ribosomal protein S16 8 64 7.1E-21 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1298 76b8bc7a49d4f54f6d0baf33bdd1fac9 76 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 74 22.751 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1298 76b8bc7a49d4f54f6d0baf33bdd1fac9 76 Gene3D G3DSA:3.30.1320.10 1 76 1.2E-28 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 SUPERFAMILY SSF64484 21 1434 0.0 T 13-10-2018 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Pfam PF04565 RNA polymerase Rpb2, domain 3 586 654 1.7E-30 T 13-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Gene3D G3DSA:2.40.270.10 867 909 4.7E-7 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Gene3D G3DSA:3.90.1800.10 1344 1397 7.9E-11 T 13-10-2018 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Gene3D G3DSA:3.90.1100.10 715 786 2.7E-20 T 13-10-2018 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Gene3D G3DSA:2.40.50.100 787 865 1.8E-31 T 13-10-2018 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Gene3D G3DSA:2.40.270.10 1130 1334 2.1E-79 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1160 1172 - T 13-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Pfam PF04563 RNA polymerase beta subunit 121 568 1.7E-21 T 13-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Pfam PF04560 RNA polymerase Rpb2, domain 7 1358 1433 1.7E-25 T 13-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Pfam PF00562 RNA polymerase Rpb2, domain 6 790 1356 1.5E-164 T 13-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Pfam PF10385 RNA polymerase beta subunit external 1 domain 664 729 4.7E-28 T 13-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Pfam PF04561 RNA polymerase Rpb2, domain 2 491 527 2.2E-5 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 118 1430 0.0 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Gene3D G3DSA:3.90.1100.10 27 95 4.3E-11 T 13-10-2018 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Gene3D G3DSA:3.90.1100.10 501 714 5.3E-66 T 13-10-2018 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Gene3D G3DSA:3.90.1100.10 112 210 1.1E-26 T 13-10-2018 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Gene3D G3DSA:3.90.1110.10 331 438 1.2E-18 T 13-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Gene3D G3DSA:2.40.50.150 910 1030 2.6E-48 T 13-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1579 4a775a635d785dc1cf62010c0f53b716 1449 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 22 1434 12.14 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_0686 130edc9a18d886da75aaeebb81e25c72 326 PIRSF PIRSF000114 1 325 5.7E-99 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Theam_0686 130edc9a18d886da75aaeebb81e25c72 326 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 177 313 9.6E-52 T 13-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Theam_0686 130edc9a18d886da75aaeebb81e25c72 326 Gene3D G3DSA:1.10.1040.10 186 326 1.4E-52 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Theam_0686 130edc9a18d886da75aaeebb81e25c72 326 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 315 35.578 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Theam_0686 130edc9a18d886da75aaeebb81e25c72 326 SUPERFAMILY SSF48179 176 324 1.28E-54 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Theam_0686 130edc9a18d886da75aaeebb81e25c72 326 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 55 82 4.3E-46 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Theam_0686 130edc9a18d886da75aaeebb81e25c72 326 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 130 150 4.3E-46 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Theam_0686 130edc9a18d886da75aaeebb81e25c72 326 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 170 194 4.3E-46 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Theam_0686 130edc9a18d886da75aaeebb81e25c72 326 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 4.3E-46 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Theam_0686 130edc9a18d886da75aaeebb81e25c72 326 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 235 252 4.3E-46 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Theam_0686 130edc9a18d886da75aaeebb81e25c72 326 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 195 219 4.3E-46 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Theam_0686 130edc9a18d886da75aaeebb81e25c72 326 SUPERFAMILY SSF51735 2 176 1.87E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0686 130edc9a18d886da75aaeebb81e25c72 326 Gene3D G3DSA:3.40.50.720 1 184 8.8E-52 T 13-10-2018 Theam_0686 130edc9a18d886da75aaeebb81e25c72 326 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 185 206 - T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Theam_0686 130edc9a18d886da75aaeebb81e25c72 326 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 154 3.5E-37 T 13-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 Pfam PF00009 Elongation factor Tu GTP binding domain 379 540 5.0E-36 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 290 878 4.2E-265 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 Gene3D G3DSA:2.40.30.10 781 878 1.5E-36 T 13-10-2018 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 SUPERFAMILY SSF52540 368 551 2.16E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 Gene3D G3DSA:1.10.10.2480 1 69 1.2E-17 T 13-10-2018 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 Pfam PF11987 Translation-initiation factor 2 664 769 1.9E-40 T 13-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 PRINTS PR00315 GTP-binding elongation factor signature 447 458 2.3E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 PRINTS PR00315 GTP-binding elongation factor signature 379 392 2.3E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 PRINTS PR00315 GTP-binding elongation factor signature 483 492 2.3E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 PRINTS PR00315 GTP-binding elongation factor signature 431 441 2.3E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 SUPERFAMILY SSF50447 551 635 2.0E-27 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 SUPERFAMILY SSF52156 657 786 1.14E-40 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 SUPERFAMILY SSF50447 781 877 1.36E-35 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 Pfam PF03144 Elongation factor Tu domain 2 800 867 4.1E-8 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 Gene3D G3DSA:2.40.30.10 551 669 1.9E-43 T 13-10-2018 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 380 538 1.6E-35 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 877 18.086 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 296 344 7.4E-12 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 3 49 3.3E-14 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 ProSitePatterns PS01176 Initiation factor 2 signature. 830 852 - T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 Gene3D G3DSA:3.40.50.300 372 550 1.4E-74 T 13-10-2018 Theam_1548 ce41ff6489cacfccb98f5df12b4646b2 879 Gene3D G3DSA:3.40.50.10050 674 780 6.4E-42 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Theam_0736 2f7833e7eb71b3e08edd7165d20e5753 421 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 164 179 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0736 2f7833e7eb71b3e08edd7165d20e5753 421 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 5 411 1.6E-181 T 13-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0736 2f7833e7eb71b3e08edd7165d20e5753 421 Gene3D G3DSA:1.20.1440.230 324 416 1.1E-32 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0736 2f7833e7eb71b3e08edd7165d20e5753 421 SUPERFAMILY SSF142984 238 321 1.16E-25 T 13-10-2018 Theam_0736 2f7833e7eb71b3e08edd7165d20e5753 421 Gene3D G3DSA:3.10.20.600 229 323 1.5E-34 T 13-10-2018 Theam_0736 2f7833e7eb71b3e08edd7165d20e5753 421 SMART SM00928 326 371 1.4E-26 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0736 2f7833e7eb71b3e08edd7165d20e5753 421 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 45 216 4.4E-49 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0736 2f7833e7eb71b3e08edd7165d20e5753 421 SUPERFAMILY SSF140490 323 418 3.66E-34 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0736 2f7833e7eb71b3e08edd7165d20e5753 421 Gene3D G3DSA:3.40.50.11540 50 228 3.0E-82 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0736 2f7833e7eb71b3e08edd7165d20e5753 421 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 339 350 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0736 2f7833e7eb71b3e08edd7165d20e5753 421 Pfam PF10531 SLBB domain 242 287 2.2E-12 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0736 2f7833e7eb71b3e08edd7165d20e5753 421 SUPERFAMILY SSF142019 4 235 4.05E-89 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0736 2f7833e7eb71b3e08edd7165d20e5753 421 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 328 410 9.2E-30 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0220 fd525e8c9b6ff3074454bb2994324a92 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 123 7.1E-23 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Theam_0220 fd525e8c9b6ff3074454bb2994324a92 190 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Theam_0220 fd525e8c9b6ff3074454bb2994324a92 190 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.334 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Theam_0220 fd525e8c9b6ff3074454bb2994324a92 190 PIRSF PIRSF005901 2 188 6.9E-71 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP Theam_0220 fd525e8c9b6ff3074454bb2994324a92 190 SUPERFAMILY SSF50249 131 187 1.28E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0220 fd525e8c9b6ff3074454bb2994324a92 190 Pfam PF09285 Elongation factor P, C-terminal 131 186 2.6E-26 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Theam_0220 fd525e8c9b6ff3074454bb2994324a92 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 62 3.1E-25 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like Theam_0220 fd525e8c9b6ff3074454bb2994324a92 190 SUPERFAMILY SSF50249 68 128 1.07E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0220 fd525e8c9b6ff3074454bb2994324a92 190 SMART SM01185 69 123 2.6E-27 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Theam_0220 fd525e8c9b6ff3074454bb2994324a92 190 Gene3D G3DSA:2.40.50.140 130 189 7.4E-28 T 13-10-2018 Theam_0220 fd525e8c9b6ff3074454bb2994324a92 190 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 8.7E-78 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Theam_0220 fd525e8c9b6ff3074454bb2994324a92 190 Gene3D G3DSA:2.40.50.140 66 129 5.2E-25 T 13-10-2018 Theam_0220 fd525e8c9b6ff3074454bb2994324a92 190 Gene3D G3DSA:2.30.30.30 1 63 5.5E-27 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Theam_0220 fd525e8c9b6ff3074454bb2994324a92 190 SMART SM00841 131 186 6.4E-33 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Theam_0220 fd525e8c9b6ff3074454bb2994324a92 190 SUPERFAMILY SSF50104 3 63 9.53E-20 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Theam_0599 8be7c4bc4f91262a983ff4a85c8a00cf 297 Gene3D G3DSA:3.40.50.2000 151 297 9.1E-21 T 13-10-2018 Theam_0599 8be7c4bc4f91262a983ff4a85c8a00cf 297 Gene3D G3DSA:3.40.50.2000 1 142 8.7E-28 T 13-10-2018 Theam_0599 8be7c4bc4f91262a983ff4a85c8a00cf 297 SUPERFAMILY SSF53756 1 296 3.1E-57 T 13-10-2018 Theam_0599 8be7c4bc4f91262a983ff4a85c8a00cf 297 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 66 271 2.1E-20 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Theam_0889 d92a02d5406bbbff1284774508545ef4 627 Gene3D G3DSA:2.60.40.3140 35 232 1.1E-49 T 13-10-2018 Theam_0889 d92a02d5406bbbff1284774508545ef4 627 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 40 211 1.5E-36 T 13-10-2018 IPR024618 Domain of unknown function DUF3857 Theam_0889 d92a02d5406bbbff1284774508545ef4 627 Pfam PF01841 Transglutaminase-like superfamily 260 329 4.7E-10 T 13-10-2018 IPR002931 Transglutaminase-like Theam_0889 d92a02d5406bbbff1284774508545ef4 627 Pfam PF12970 Domain of Unknown Function with PDB structure (DUF3858) 530 620 1.8E-8 T 13-10-2018 IPR024544 Domain of unknown function DUF3858 Theam_0889 d92a02d5406bbbff1284774508545ef4 627 Gene3D G3DSA:3.10.620.30 244 404 2.6E-38 T 13-10-2018 Theam_0889 d92a02d5406bbbff1284774508545ef4 627 SUPERFAMILY SSF54001 253 389 3.92E-14 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Theam_0889 d92a02d5406bbbff1284774508545ef4 627 Gene3D G3DSA:2.60.120.1130 510 623 2.9E-7 T 13-10-2018 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 PRINTS PR01047 Threonyl-tRNA synthetase signature 486 514 1.5E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 PRINTS PR01047 Threonyl-tRNA synthetase signature 529 542 1.5E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 PRINTS PR01047 Threonyl-tRNA synthetase signature 385 408 1.5E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 PRINTS PR01047 Threonyl-tRNA synthetase signature 556 568 1.5E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 PRINTS PR01047 Threonyl-tRNA synthetase signature 352 380 1.5E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 219 2.6E-14 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 Gene3D G3DSA:3.30.54.20 132 187 4.0E-63 T 13-10-2018 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 SUPERFAMILY SSF55186 63 241 6.93E-64 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 653 5.6E-224 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 SUPERFAMILY SSF55681 243 548 1.3E-94 T 13-10-2018 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 SUPERFAMILY SSF52954 551 656 2.11E-33 T 13-10-2018 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 Gene3D G3DSA:3.10.20.30 1 63 4.3E-19 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 SUPERFAMILY SSF81271 2 61 1.61E-12 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 SMART SM00863 169 219 3.2E-23 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 656 36.25 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 Gene3D G3DSA:3.30.980.10 69 222 4.0E-63 T 13-10-2018 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 Pfam PF03129 Anticodon binding domain 563 651 3.0E-25 T 13-10-2018 IPR004154 Anticodon-binding Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 Pfam PF02824 TGS domain 4 61 2.2E-8 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 Gene3D G3DSA:3.40.50.800 554 658 5.1E-36 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 Gene3D G3DSA:3.30.930.10 223 553 1.3E-127 T 13-10-2018 Theam_1177 49c3deed7894dc3c203f6c88d73715ba 658 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 345 551 4.1E-41 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1274 a4bf6c4f9358efe2ce45f95878643fc7 321 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 156 167 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_1274 a4bf6c4f9358efe2ce45f95878643fc7 321 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 114 3.1E-36 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1274 a4bf6c4f9358efe2ce45f95878643fc7 321 Gene3D G3DSA:1.10.1060.10 112 245 3.5E-35 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Theam_1274 a4bf6c4f9358efe2ce45f95878643fc7 321 SUPERFAMILY SSF46548 112 240 3.31E-29 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Theam_1274 a4bf6c4f9358efe2ce45f95878643fc7 321 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 57 65 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Theam_1274 a4bf6c4f9358efe2ce45f95878643fc7 321 Pfam PF13183 4Fe-4S dicluster domain 153 225 3.4E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_1274 a4bf6c4f9358efe2ce45f95878643fc7 321 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 10 235 6.9E-73 T 13-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1274 a4bf6c4f9358efe2ce45f95878643fc7 321 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 211 222 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_1274 a4bf6c4f9358efe2ce45f95878643fc7 321 Gene3D G3DSA:3.10.20.30 1 110 3.9E-38 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Theam_1274 a4bf6c4f9358efe2ce45f95878643fc7 321 SUPERFAMILY SSF54292 1 110 6.55E-30 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Theam_0524 edcacc5c2bedbb2495bcb7815f52e2a7 151 SUPERFAMILY SSF89095 1 146 3.14E-49 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Theam_0524 edcacc5c2bedbb2495bcb7815f52e2a7 151 Gene3D G3DSA:1.10.10.410 91 147 4.1E-28 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Theam_0524 edcacc5c2bedbb2495bcb7815f52e2a7 151 Gene3D G3DSA:1.10.1510.10 1 90 4.4E-33 T 13-10-2018 Theam_0524 edcacc5c2bedbb2495bcb7815f52e2a7 151 Pfam PF09424 Yqey-like protein 4 146 7.0E-58 T 13-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 Theam_0195 2ac7897636015a65b26f69749a8ccf9a 607 SUPERFAMILY SSF56935 25 606 3.66E-109 T 13-10-2018 Theam_0195 2ac7897636015a65b26f69749a8ccf9a 607 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 145 1.1E-28 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Theam_0195 2ac7897636015a65b26f69749a8ccf9a 607 Gene3D G3DSA:2.40.170.20 151 606 9.6E-93 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Theam_0195 2ac7897636015a65b26f69749a8ccf9a 607 Gene3D G3DSA:2.170.130.10 19 150 7.8E-37 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Theam_0195 2ac7897636015a65b26f69749a8ccf9a 607 Pfam PF00593 TonB dependent receptor 168 605 2.5E-42 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 SMART SM00483 1 313 3.6E-35 T 13-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 Pfam PF14716 Helix-hairpin-helix domain 3 71 3.0E-19 T 13-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 Pfam PF02811 PHP domain 338 431 1.0E-8 T 13-10-2018 IPR004013 PHP domain GO:0003824 Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 SUPERFAMILY SSF47781 77 147 6.23E-9 T 13-10-2018 IPR010994 RuvA domain 2-like Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 Pfam PF14791 DNA polymerase beta thumb 253 313 8.9E-19 T 13-10-2018 IPR029398 DNA polymerase beta, thumb domain Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 PIRSF PIRSF005047 1 569 1.2E-230 T 13-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 SMART SM00278 51 70 7.1 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 SMART SM00278 91 110 13.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 SMART SM00278 126 145 0.057 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 Gene3D G3DSA:3.20.20.140 325 571 1.6E-75 T 13-10-2018 Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 SUPERFAMILY SSF47802 1 84 3.01E-19 T 13-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 Gene3D G3DSA:3.30.460.10 155 259 1.3E-30 T 13-10-2018 Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 58 75 3.8E-8 T 13-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 253 260 3.8E-8 T 13-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 238 246 3.8E-8 T 13-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 295 312 3.8E-8 T 13-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 Gene3D G3DSA:1.10.150.20 86 154 6.0E-24 T 13-10-2018 Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 SMART SM00481 337 417 7.8E-19 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 Pfam PF14520 Helix-hairpin-helix domain 92 144 2.6E-13 T 13-10-2018 Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 Gene3D G3DSA:1.10.150.110 1 85 1.2E-26 T 13-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 SUPERFAMILY SSF89550 335 570 2.75E-56 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 Gene3D G3DSA:3.30.210.10 260 323 1.7E-26 T 13-10-2018 IPR037160 DNA polymerase, thumb domain superfamily Theam_1063 481e541ee32f80eb7ffb057330a3374c 575 SUPERFAMILY SSF81301 155 313 3.53E-42 T 13-10-2018 Theam_0048 a7dbc9db582001b27ba2e04a1abf42fd 222 SUPERFAMILY SSF47413 1 66 2.82E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Theam_0048 a7dbc9db582001b27ba2e04a1abf42fd 222 SMART SM00530 6 61 1.7E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Theam_0048 a7dbc9db582001b27ba2e04a1abf42fd 222 Gene3D G3DSA:2.10.109.10 99 211 2.4E-19 T 13-10-2018 Theam_0048 a7dbc9db582001b27ba2e04a1abf42fd 222 Gene3D G3DSA:1.10.260.40 2 69 2.7E-15 T 13-10-2018 Theam_0048 a7dbc9db582001b27ba2e04a1abf42fd 222 Pfam PF12844 Helix-turn-helix domain 4 67 1.7E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Theam_0048 a7dbc9db582001b27ba2e04a1abf42fd 222 SUPERFAMILY SSF51306 87 207 2.88E-25 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Theam_0048 a7dbc9db582001b27ba2e04a1abf42fd 222 Pfam PF00717 Peptidase S24-like 129 197 3.6E-14 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Theam_1120 17e912fbb7e74fd65687b6a760b56f24 97 SUPERFAMILY SSF46785 5 94 3.82E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_1120 17e912fbb7e74fd65687b6a760b56f24 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 2.7E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1120 17e912fbb7e74fd65687b6a760b56f24 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 2.7E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1120 17e912fbb7e74fd65687b6a760b56f24 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 38 49 2.7E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1120 17e912fbb7e74fd65687b6a760b56f24 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 19 34 2.7E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1120 17e912fbb7e74fd65687b6a760b56f24 97 Pfam PF01022 Bacterial regulatory protein, arsR family 24 68 1.4E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1120 17e912fbb7e74fd65687b6a760b56f24 97 SMART SM00418 17 95 1.7E-25 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1120 17e912fbb7e74fd65687b6a760b56f24 97 Gene3D G3DSA:1.10.10.10 3 96 1.6E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_1228 bc3b8ba46c4c31f33b9d078f50f48111 134 SUPERFAMILY SSF54631 1 127 4.3E-34 T 13-10-2018 Theam_1228 bc3b8ba46c4c31f33b9d078f50f48111 134 Pfam PF00571 CBS domain 3 54 3.6E-11 T 13-10-2018 IPR000644 CBS domain Theam_1228 bc3b8ba46c4c31f33b9d078f50f48111 134 Pfam PF00571 CBS domain 67 120 1.0E-13 T 13-10-2018 IPR000644 CBS domain Theam_1228 bc3b8ba46c4c31f33b9d078f50f48111 134 Gene3D G3DSA:3.10.580.10 1 131 1.5E-36 T 13-10-2018 Theam_1228 bc3b8ba46c4c31f33b9d078f50f48111 134 SMART SM00116 10 57 2.0E-7 T 13-10-2018 IPR000644 CBS domain Theam_1228 bc3b8ba46c4c31f33b9d078f50f48111 134 SMART SM00116 74 122 3.6E-4 T 13-10-2018 IPR000644 CBS domain Theam_0149 bb83e65c4c989f6a58438ba2a9bf8946 435 SUPERFAMILY SSF50156 91 187 1.05E-19 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Theam_0149 bb83e65c4c989f6a58438ba2a9bf8946 435 Pfam PF13180 PDZ domain 102 175 4.3E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Theam_0149 bb83e65c4c989f6a58438ba2a9bf8946 435 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 54 382 1.9E-100 T 13-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Theam_0149 bb83e65c4c989f6a58438ba2a9bf8946 435 Gene3D G3DSA:3.90.226.10 192 366 9.3E-95 T 13-10-2018 Theam_0149 bb83e65c4c989f6a58438ba2a9bf8946 435 SUPERFAMILY SSF52096 43 373 5.63E-78 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Theam_0149 bb83e65c4c989f6a58438ba2a9bf8946 435 SMART SM00245 177 369 1.7E-68 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Theam_0149 bb83e65c4c989f6a58438ba2a9bf8946 435 Pfam PF03572 Peptidase family S41 202 368 4.0E-52 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Theam_0149 bb83e65c4c989f6a58438ba2a9bf8946 435 Gene3D G3DSA:2.30.42.10 102 191 9.3E-95 T 13-10-2018 Theam_0149 bb83e65c4c989f6a58438ba2a9bf8946 435 SMART SM00228 102 175 9.6E-17 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Theam_0149 bb83e65c4c989f6a58438ba2a9bf8946 435 Gene3D G3DSA:3.30.750.44 49 344 9.3E-95 T 13-10-2018 Theam_0475 d5b5940ba50637e6ef2bb9ccbbd7cb27 416 Pfam PF03471 Transporter associated domain 341 414 4.8E-17 T 13-10-2018 IPR005170 Transporter-associated domain Theam_0475 d5b5940ba50637e6ef2bb9ccbbd7cb27 416 SMART SM01091 337 416 7.5E-18 T 13-10-2018 IPR005170 Transporter-associated domain Theam_0475 d5b5940ba50637e6ef2bb9ccbbd7cb27 416 SUPERFAMILY SSF54631 202 338 2.27E-31 T 13-10-2018 Theam_0475 d5b5940ba50637e6ef2bb9ccbbd7cb27 416 Gene3D G3DSA:3.10.580.10 186 329 6.4E-47 T 13-10-2018 Theam_0475 d5b5940ba50637e6ef2bb9ccbbd7cb27 416 SUPERFAMILY SSF56176 340 413 3.27E-15 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Theam_0475 d5b5940ba50637e6ef2bb9ccbbd7cb27 416 Gene3D G3DSA:3.30.465.10 330 415 8.3E-17 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Theam_0475 d5b5940ba50637e6ef2bb9ccbbd7cb27 416 Pfam PF00571 CBS domain 269 323 1.3E-9 T 13-10-2018 IPR000644 CBS domain Theam_0475 d5b5940ba50637e6ef2bb9ccbbd7cb27 416 Pfam PF00571 CBS domain 206 262 4.0E-6 T 13-10-2018 IPR000644 CBS domain Theam_0475 d5b5940ba50637e6ef2bb9ccbbd7cb27 416 SMART SM00116 275 323 4.3 T 13-10-2018 IPR000644 CBS domain Theam_0475 d5b5940ba50637e6ef2bb9ccbbd7cb27 416 SMART SM00116 215 264 8.8E-5 T 13-10-2018 IPR000644 CBS domain Theam_0475 d5b5940ba50637e6ef2bb9ccbbd7cb27 416 Pfam PF01595 Domain of unknown function DUF21 8 185 5.5E-43 T 13-10-2018 IPR002550 CNNM, transmembrane domain Theam_1122 762be0dd36365eddd32d870f4f8e76f1 581 Pfam PF00374 Nickel-dependent hydrogenase 39 566 4.9E-216 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Theam_1122 762be0dd36365eddd32d870f4f8e76f1 581 Gene3D G3DSA:1.10.645.10 1 566 3.0E-223 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1122 762be0dd36365eddd32d870f4f8e76f1 581 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 557 566 - T 13-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Theam_1122 762be0dd36365eddd32d870f4f8e76f1 581 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 13-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Theam_1122 762be0dd36365eddd32d870f4f8e76f1 581 SUPERFAMILY SSF56762 2 566 7.06E-169 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0255 b436bac523ec2957eee99ce5736f0904 398 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.4E-16 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Theam_0255 b436bac523ec2957eee99ce5736f0904 398 PRINTS PR00315 GTP-binding elongation factor signature 94 105 5.3E-25 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_0255 b436bac523ec2957eee99ce5736f0904 398 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.3E-25 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_0255 b436bac523ec2957eee99ce5736f0904 398 PRINTS PR00315 GTP-binding elongation factor signature 131 140 5.3E-25 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_0255 b436bac523ec2957eee99ce5736f0904 398 PRINTS PR00315 GTP-binding elongation factor signature 78 88 5.3E-25 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_0255 b436bac523ec2957eee99ce5736f0904 398 PRINTS PR00315 GTP-binding elongation factor signature 14 27 5.3E-25 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_0255 b436bac523ec2957eee99ce5736f0904 398 Pfam PF03143 Elongation factor Tu C-terminal domain 302 396 2.9E-35 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Theam_0255 b436bac523ec2957eee99ce5736f0904 398 Gene3D G3DSA:2.40.30.10 209 338 2.7E-56 T 13-10-2018 Theam_0255 b436bac523ec2957eee99ce5736f0904 398 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Theam_0255 b436bac523ec2957eee99ce5736f0904 398 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 397 3.2E-223 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Theam_0255 b436bac523ec2957eee99ce5736f0904 398 Gene3D G3DSA:3.40.50.300 1 206 7.3E-70 T 13-10-2018 Theam_0255 b436bac523ec2957eee99ce5736f0904 398 Pfam PF03144 Elongation factor Tu domain 2 228 297 1.6E-18 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Theam_0255 b436bac523ec2957eee99ce5736f0904 398 Pfam PF00009 Elongation factor Tu GTP binding domain 10 204 4.6E-61 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_0255 b436bac523ec2957eee99ce5736f0904 398 Gene3D G3DSA:2.40.30.10 342 397 1.9E-29 T 13-10-2018 Theam_0255 b436bac523ec2957eee99ce5736f0904 398 SUPERFAMILY SSF50447 208 305 1.63E-32 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Theam_0255 b436bac523ec2957eee99ce5736f0904 398 SUPERFAMILY SSF50465 302 397 5.4E-38 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Theam_0255 b436bac523ec2957eee99ce5736f0904 398 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 398 60.27 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Theam_0255 b436bac523ec2957eee99ce5736f0904 398 SUPERFAMILY SSF52540 5 222 1.48E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1587 b436bac523ec2957eee99ce5736f0904 398 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.4E-16 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Theam_1587 b436bac523ec2957eee99ce5736f0904 398 PRINTS PR00315 GTP-binding elongation factor signature 94 105 5.3E-25 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1587 b436bac523ec2957eee99ce5736f0904 398 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.3E-25 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1587 b436bac523ec2957eee99ce5736f0904 398 PRINTS PR00315 GTP-binding elongation factor signature 131 140 5.3E-25 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1587 b436bac523ec2957eee99ce5736f0904 398 PRINTS PR00315 GTP-binding elongation factor signature 78 88 5.3E-25 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1587 b436bac523ec2957eee99ce5736f0904 398 PRINTS PR00315 GTP-binding elongation factor signature 14 27 5.3E-25 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1587 b436bac523ec2957eee99ce5736f0904 398 Pfam PF03143 Elongation factor Tu C-terminal domain 302 396 2.9E-35 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Theam_1587 b436bac523ec2957eee99ce5736f0904 398 Gene3D G3DSA:2.40.30.10 209 338 2.7E-56 T 13-10-2018 Theam_1587 b436bac523ec2957eee99ce5736f0904 398 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Theam_1587 b436bac523ec2957eee99ce5736f0904 398 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 397 3.2E-223 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Theam_1587 b436bac523ec2957eee99ce5736f0904 398 Gene3D G3DSA:3.40.50.300 1 206 7.3E-70 T 13-10-2018 Theam_1587 b436bac523ec2957eee99ce5736f0904 398 Pfam PF03144 Elongation factor Tu domain 2 228 297 1.6E-18 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Theam_1587 b436bac523ec2957eee99ce5736f0904 398 Pfam PF00009 Elongation factor Tu GTP binding domain 10 204 4.6E-61 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1587 b436bac523ec2957eee99ce5736f0904 398 Gene3D G3DSA:2.40.30.10 342 397 1.9E-29 T 13-10-2018 Theam_1587 b436bac523ec2957eee99ce5736f0904 398 SUPERFAMILY SSF50447 208 305 1.63E-32 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Theam_1587 b436bac523ec2957eee99ce5736f0904 398 SUPERFAMILY SSF50465 302 397 5.4E-38 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Theam_1587 b436bac523ec2957eee99ce5736f0904 398 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 398 60.27 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Theam_1587 b436bac523ec2957eee99ce5736f0904 398 SUPERFAMILY SSF52540 5 222 1.48E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0382 8d4a6a37589e4c8c956adceca31dc569 171 SUPERFAMILY SSF51161 4 168 1.66E-48 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Theam_0382 8d4a6a37589e4c8c956adceca31dc569 171 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 10 44 1.5E-7 T 13-10-2018 IPR001451 Hexapeptide repeat Theam_0382 8d4a6a37589e4c8c956adceca31dc569 171 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 121 5.8E-8 T 13-10-2018 IPR001451 Hexapeptide repeat Theam_0382 8d4a6a37589e4c8c956adceca31dc569 171 Gene3D G3DSA:2.160.10.10 1 170 5.2E-63 T 13-10-2018 Theam_0629 a67f24a514c24a9cdb2c90a97c222707 472 Pfam PF00120 Glutamine synthetase, catalytic domain 106 469 2.7E-137 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Theam_0629 a67f24a514c24a9cdb2c90a97c222707 472 SUPERFAMILY SSF55931 107 471 2.16E-137 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Theam_0629 a67f24a514c24a9cdb2c90a97c222707 472 ProSitePatterns PS00180 Glutamine synthetase signature 1. 53 71 - T 13-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Theam_0629 a67f24a514c24a9cdb2c90a97c222707 472 Gene3D G3DSA:3.10.20.70 5 107 2.2E-34 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Theam_0629 a67f24a514c24a9cdb2c90a97c222707 472 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 13-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Theam_0629 a67f24a514c24a9cdb2c90a97c222707 472 SMART SM01230 105 381 3.9E-149 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Theam_0629 a67f24a514c24a9cdb2c90a97c222707 472 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 18 98 1.4E-28 T 13-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Theam_0629 a67f24a514c24a9cdb2c90a97c222707 472 SUPERFAMILY SSF54368 6 104 5.1E-32 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Theam_0629 a67f24a514c24a9cdb2c90a97c222707 472 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 471 1.3E-202 T 13-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Theam_0629 a67f24a514c24a9cdb2c90a97c222707 472 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 388 400 - T 13-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Theam_0629 a67f24a514c24a9cdb2c90a97c222707 472 Gene3D G3DSA:3.30.590.10 108 457 4.4E-146 T 13-10-2018 Theam_0425 2e9da574c2e40e9763270d624f7e5c2e 224 SUPERFAMILY SSF54862 60 193 2.55E-16 T 13-10-2018 Theam_0425 2e9da574c2e40e9763270d624f7e5c2e 224 Pfam PF12838 4Fe-4S dicluster domain 63 116 6.9E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_0425 2e9da574c2e40e9763270d624f7e5c2e 224 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0425 2e9da574c2e40e9763270d624f7e5c2e 224 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0425 2e9da574c2e40e9763270d624f7e5c2e 224 Gene3D G3DSA:3.30.70.20 57 131 3.1E-9 T 13-10-2018 Theam_0425 2e9da574c2e40e9763270d624f7e5c2e 224 Gene3D G3DSA:3.30.70.20 132 205 5.4E-9 T 13-10-2018 Theam_0968 e6b0de9ee205798a9db2a91b9df78769 145 SUPERFAMILY SSF47979 68 128 2.49E-17 T 13-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 Theam_0968 e6b0de9ee205798a9db2a91b9df78769 145 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 68 133 6.4E-20 T 13-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 Theam_0968 e6b0de9ee205798a9db2a91b9df78769 145 Gene3D G3DSA:1.10.60.10 78 137 1.3E-17 T 13-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 Theam_0968 e6b0de9ee205798a9db2a91b9df78769 145 SUPERFAMILY SSF46785 8 65 6.75E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0968 e6b0de9ee205798a9db2a91b9df78769 145 Gene3D G3DSA:1.10.10.10 8 76 5.0E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0968 e6b0de9ee205798a9db2a91b9df78769 145 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 6 63 4.5E-17 T 13-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 Theam_0968 e6b0de9ee205798a9db2a91b9df78769 145 SMART SM00529 29 128 2.9E-35 T 13-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 Theam_1648 2529126abfd618a098ee228d922d624b 96 SUPERFAMILY SSF141000 2 93 2.09E-30 T 13-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 Theam_1648 2529126abfd618a098ee228d922d624b 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 24.513 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Theam_1648 2529126abfd618a098ee228d922d624b 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 1.8E-21 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Theam_1648 2529126abfd618a098ee228d922d624b 96 Gene3D G3DSA:1.10.20.60 1 93 4.8E-31 T 13-10-2018 Theam_1648 2529126abfd618a098ee228d922d624b 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 94 2.2E-30 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Theam_0205 0eccee3e08196e5337868f55141f53da 213 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 209 24.413 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Theam_0205 0eccee3e08196e5337868f55141f53da 213 Gene3D G3DSA:3.40.50.620 2 206 4.9E-49 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_0205 0eccee3e08196e5337868f55141f53da 213 SUPERFAMILY SSF52374 1 205 4.22E-43 T 13-10-2018 Theam_0205 0eccee3e08196e5337868f55141f53da 213 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 4 200 1.2E-41 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Theam_0205 0eccee3e08196e5337868f55141f53da 213 Pfam PF01467 Cytidylyltransferase-like 4 183 2.3E-20 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Theam_0205 0eccee3e08196e5337868f55141f53da 213 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 61 8.5E-8 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Theam_0534 b1e4bda8041669e8b4488bfe7e229a4f 550 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 13 549 3.5E-231 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Theam_0534 b1e4bda8041669e8b4488bfe7e229a4f 550 Pfam PF00920 Dehydratase family 30 546 5.0E-219 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Theam_0534 b1e4bda8041669e8b4488bfe7e229a4f 550 Gene3D G3DSA:3.50.30.80 369 520 6.6E-59 T 13-10-2018 Theam_0534 b1e4bda8041669e8b4488bfe7e229a4f 550 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 118 128 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Theam_0534 b1e4bda8041669e8b4488bfe7e229a4f 550 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 549 45.053 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Theam_0534 b1e4bda8041669e8b4488bfe7e229a4f 550 SUPERFAMILY SSF143975 6 368 9.29E-133 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Theam_0534 b1e4bda8041669e8b4488bfe7e229a4f 550 SUPERFAMILY SSF52016 369 549 9.42E-63 T 13-10-2018 Theam_0534 b1e4bda8041669e8b4488bfe7e229a4f 550 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 457 468 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Theam_0608 6099805c8534e5ea760189c017e3e10e 202 Pfam PF02677 Uncharacterized BCR, COG1636 3 173 2.8E-58 T 13-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 Theam_0608 6099805c8534e5ea760189c017e3e10e 202 SUPERFAMILY SSF52402 19 167 1.08E-5 T 13-10-2018 Theam_0608 6099805c8534e5ea760189c017e3e10e 202 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 3 174 33.52 T 13-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 Theam_0608 6099805c8534e5ea760189c017e3e10e 202 Gene3D G3DSA:3.40.50.620 16 182 1.8E-5 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1150 0f8415465dc17b3c65e4dcdf58deb227 214 Gene3D G3DSA:3.40.50.2300 1 122 2.1E-27 T 13-10-2018 Theam_1150 0f8415465dc17b3c65e4dcdf58deb227 214 SMART SM00448 1 111 8.2E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_1150 0f8415465dc17b3c65e4dcdf58deb227 214 Gene3D G3DSA:1.10.10.10 123 214 7.0E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_1150 0f8415465dc17b3c65e4dcdf58deb227 214 Pfam PF00072 Response regulator receiver domain 3 111 4.8E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_1150 0f8415465dc17b3c65e4dcdf58deb227 214 SMART SM00862 142 212 4.5E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Theam_1150 0f8415465dc17b3c65e4dcdf58deb227 214 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 212 1.6E-15 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Theam_1150 0f8415465dc17b3c65e4dcdf58deb227 214 SUPERFAMILY SSF52172 1 119 1.27E-28 T 13-10-2018 IPR011006 CheY-like superfamily Theam_1150 0f8415465dc17b3c65e4dcdf58deb227 214 SUPERFAMILY SSF46894 119 213 1.81E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Theam_0298 8eacf5ba8baeb760a4695d351131fa65 188 Pfam PF01195 Peptidyl-tRNA hydrolase 4 186 1.5E-60 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Theam_0298 8eacf5ba8baeb760a4695d351131fa65 188 SUPERFAMILY SSF53178 1 178 6.28E-67 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Theam_0298 8eacf5ba8baeb760a4695d351131fa65 188 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 179 37.247 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Theam_0298 8eacf5ba8baeb760a4695d351131fa65 188 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Theam_0298 8eacf5ba8baeb760a4695d351131fa65 188 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 186 1.5E-64 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Theam_0298 8eacf5ba8baeb760a4695d351131fa65 188 Gene3D G3DSA:3.40.50.1470 2 188 8.8E-72 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Theam_1368 eaf3ce9790af9d7e7e263a69d739ac85 402 Hamap MF_00005 Argininosuccinate synthase [argG]. 2 398 53.1 T 13-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Theam_1368 eaf3ce9790af9d7e7e263a69d739ac85 402 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 8 16 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Theam_1368 eaf3ce9790af9d7e7e263a69d739ac85 402 SUPERFAMILY SSF69864 172 396 2.35E-84 T 13-10-2018 Theam_1368 eaf3ce9790af9d7e7e263a69d739ac85 402 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 115 126 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Theam_1368 eaf3ce9790af9d7e7e263a69d739ac85 402 Pfam PF00764 Arginosuccinate synthase 6 393 7.0E-157 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Theam_1368 eaf3ce9790af9d7e7e263a69d739ac85 402 Gene3D G3DSA:3.40.50.620 1 173 9.7E-69 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1368 eaf3ce9790af9d7e7e263a69d739ac85 402 Gene3D G3DSA:3.90.1260.10 174 401 1.4E-85 T 13-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Theam_1368 eaf3ce9790af9d7e7e263a69d739ac85 402 SUPERFAMILY SSF52402 3 203 1.65E-49 T 13-10-2018 Theam_1368 eaf3ce9790af9d7e7e263a69d739ac85 402 TIGRFAM TIGR00032 argG: argininosuccinate synthase 4 396 9.3E-152 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Theam_1254 d1bf3ab4932ecaaa4be2cda5952809a9 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 8.1E-40 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_1254 d1bf3ab4932ecaaa4be2cda5952809a9 335 SUPERFAMILY SSF51735 3 168 2.64E-67 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_1254 d1bf3ab4932ecaaa4be2cda5952809a9 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 8.8E-139 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_1254 d1bf3ab4932ecaaa4be2cda5952809a9 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_1254 d1bf3ab4932ecaaa4be2cda5952809a9 335 PIRSF PIRSF000149 1 334 2.8E-143 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_1254 d1bf3ab4932ecaaa4be2cda5952809a9 335 SMART SM00846 3 152 1.0E-99 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_1254 d1bf3ab4932ecaaa4be2cda5952809a9 335 SUPERFAMILY SSF55347 152 314 2.59E-73 T 13-10-2018 Theam_1254 d1bf3ab4932ecaaa4be2cda5952809a9 335 Gene3D G3DSA:3.30.360.10 151 315 1.6E-159 T 13-10-2018 Theam_1254 d1bf3ab4932ecaaa4be2cda5952809a9 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 5.0E-41 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_1254 d1bf3ab4932ecaaa4be2cda5952809a9 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 5.0E-41 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_1254 d1bf3ab4932ecaaa4be2cda5952809a9 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 5.0E-41 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_1254 d1bf3ab4932ecaaa4be2cda5952809a9 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 5.0E-41 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_1254 d1bf3ab4932ecaaa4be2cda5952809a9 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 5.0E-41 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_1254 d1bf3ab4932ecaaa4be2cda5952809a9 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 3.5E-68 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_1254 d1bf3ab4932ecaaa4be2cda5952809a9 335 Gene3D G3DSA:3.40.50.720 4 329 1.6E-159 T 13-10-2018 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 SMART SM00437 246 509 1.1E-127 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 SMART SM00493 3 103 2.8E-38 T 13-10-2018 IPR006171 TOPRIM domain Theam_0399 650d6484370fd2e26a72366cb428d04f 698 Pfam PF01751 Toprim domain 4 114 8.3E-34 T 13-10-2018 IPR006171 TOPRIM domain Theam_0399 650d6484370fd2e26a72366cb428d04f 698 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 680 57.878 T 13-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 Gene3D G3DSA:2.70.20.10 185 456 4.0E-171 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 Gene3D G3DSA:1.10.290.10 254 390 4.0E-171 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 Gene3D G3DSA:3.40.50.140 1 135 1.5E-55 T 13-10-2018 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 283 305 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 SUPERFAMILY SSF56712 3 626 3.79E-202 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Theam_0399 650d6484370fd2e26a72366cb428d04f 698 Pfam PF01131 DNA topoisomerase 129 546 2.8E-140 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 SUPERFAMILY SSF57783 574 612 1.19E-9 T 13-10-2018 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 609 1.4E-250 T 13-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 Gene3D G3DSA:1.10.460.10 136 549 4.0E-171 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 296 305 1.7E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 375 391 1.7E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.7E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 472 486 1.7E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 163 181 1.7E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 SUPERFAMILY SSF57783 609 653 7.14E-14 T 13-10-2018 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 SMART SM00436 105 193 4.4E-53 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 655 693 4.9E-14 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 574 611 4.0E-14 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 618 652 2.1E-17 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 Gene3D G3DSA:3.30.65.10 611 655 1.4E-10 T 13-10-2018 Theam_0399 650d6484370fd2e26a72366cb428d04f 698 Gene3D G3DSA:3.30.65.10 561 610 4.8E-6 T 13-10-2018 Theam_0916 aff32385858a69895c87efb9629f07b3 187 Gene3D G3DSA:1.10.4030.30 83 180 4.7E-8 T 13-10-2018 Theam_0916 aff32385858a69895c87efb9629f07b3 187 SUPERFAMILY SSF109998 22 127 1.65E-16 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Theam_0916 aff32385858a69895c87efb9629f07b3 187 Gene3D G3DSA:1.10.8.1040 22 82 6.3E-8 T 13-10-2018 Theam_0916 aff32385858a69895c87efb9629f07b3 187 Pfam PF13624 SurA N-terminal domain 16 81 5.6E-8 T 13-10-2018 Theam_0790 51a3d2e89bef0ff0f1967b51b0932e60 469 Gene3D G3DSA:3.90.550.10 1 347 1.4E-112 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0790 51a3d2e89bef0ff0f1967b51b0932e60 469 Gene3D G3DSA:2.60.120.10 368 459 2.1E-19 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Theam_0790 51a3d2e89bef0ff0f1967b51b0932e60 469 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 468 7.0E-167 T 13-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Theam_0790 51a3d2e89bef0ff0f1967b51b0932e60 469 Pfam PF00483 Nucleotidyl transferase 2 278 6.3E-55 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Theam_0790 51a3d2e89bef0ff0f1967b51b0932e60 469 Pfam PF01050 Mannose-6-phosphate isomerase 312 464 8.6E-63 T 13-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Theam_0790 51a3d2e89bef0ff0f1967b51b0932e60 469 SUPERFAMILY SSF51182 187 469 1.08E-73 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Theam_0790 51a3d2e89bef0ff0f1967b51b0932e60 469 SUPERFAMILY SSF53448 2 273 7.8E-69 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_1545 adb807b5db514a2c16ee056c1d9b171f 124 Pfam PF01245 Ribosomal protein L19 8 117 1.0E-50 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1545 adb807b5db514a2c16ee056c1d9b171f 124 SUPERFAMILY SSF50104 8 120 2.21E-48 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Theam_1545 adb807b5db514a2c16ee056c1d9b171f 124 PRINTS PR00061 Ribosomal protein L19 signature 38 67 6.5E-42 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1545 adb807b5db514a2c16ee056c1d9b171f 124 PRINTS PR00061 Ribosomal protein L19 signature 8 37 6.5E-42 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1545 adb807b5db514a2c16ee056c1d9b171f 124 PRINTS PR00061 Ribosomal protein L19 signature 92 117 6.5E-42 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1545 adb807b5db514a2c16ee056c1d9b171f 124 PIRSF PIRSF002191 2 124 1.7E-52 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1545 adb807b5db514a2c16ee056c1d9b171f 124 Gene3D G3DSA:2.30.30.790 9 119 1.1E-16 T 13-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1545 adb807b5db514a2c16ee056c1d9b171f 124 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 8 117 2.7E-50 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1545 adb807b5db514a2c16ee056c1d9b171f 124 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 13-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_1545 adb807b5db514a2c16ee056c1d9b171f 124 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 6 118 33.194 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1222 32a9ac971fd3419e28b6b5bd80ce5db3 96 SMART SM00883 2 94 1.4E-54 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Theam_1222 32a9ac971fd3419e28b6b5bd80ce5db3 96 PRINTS PR00297 10kDa chaperonin signature 25 46 5.0E-31 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Theam_1222 32a9ac971fd3419e28b6b5bd80ce5db3 96 PRINTS PR00297 10kDa chaperonin signature 60 72 5.0E-31 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Theam_1222 32a9ac971fd3419e28b6b5bd80ce5db3 96 PRINTS PR00297 10kDa chaperonin signature 3 18 5.0E-31 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Theam_1222 32a9ac971fd3419e28b6b5bd80ce5db3 96 PRINTS PR00297 10kDa chaperonin signature 81 94 5.0E-31 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Theam_1222 32a9ac971fd3419e28b6b5bd80ce5db3 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 9.3E-36 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Theam_1222 32a9ac971fd3419e28b6b5bd80ce5db3 96 SUPERFAMILY SSF50129 1 95 1.53E-35 T 13-10-2018 IPR011032 GroES-like superfamily Theam_1222 32a9ac971fd3419e28b6b5bd80ce5db3 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 13-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Theam_1222 32a9ac971fd3419e28b6b5bd80ce5db3 96 Gene3D G3DSA:2.30.33.40 1 96 2.4E-40 T 13-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Theam_1222 32a9ac971fd3419e28b6b5bd80ce5db3 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.413 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Theam_0598 abc98b1853414a04ea1e69d54d73403e 577 Pfam PF00005 ABC transporter 353 502 2.9E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_0598 abc98b1853414a04ea1e69d54d73403e 577 SUPERFAMILY SSF52540 332 573 7.1E-88 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0598 abc98b1853414a04ea1e69d54d73403e 577 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Theam_0598 abc98b1853414a04ea1e69d54d73403e 577 Pfam PF00664 ABC transporter transmembrane region 20 283 6.6E-49 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Theam_0598 abc98b1853414a04ea1e69d54d73403e 577 SMART SM00382 362 548 2.8E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0598 abc98b1853414a04ea1e69d54d73403e 577 Gene3D G3DSA:1.20.1560.10 5 321 6.1E-79 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Theam_0598 abc98b1853414a04ea1e69d54d73403e 577 SUPERFAMILY SSF90123 3 319 7.06E-74 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Theam_0598 abc98b1853414a04ea1e69d54d73403e 577 Gene3D G3DSA:3.40.50.300 333 576 6.5E-85 T 13-10-2018 Theam_1685 0280a645a6534d1beeba28f3890a48d2 428 Gene3D G3DSA:3.10.50.40 288 378 3.0E-10 T 13-10-2018 Theam_1685 0280a645a6534d1beeba28f3890a48d2 428 SUPERFAMILY SSF109998 227 315 7.85E-5 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Theam_1685 0280a645a6534d1beeba28f3890a48d2 428 Pfam PF13145 PPIC-type PPIASE domain 270 388 7.1E-12 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Theam_1685 0280a645a6534d1beeba28f3890a48d2 428 Gene3D G3DSA:1.10.4030.30 213 406 3.0E-10 T 13-10-2018 Theam_0262 408b6ab8a5b535d30b558facea205be5 132 ProSitePatterns PS00464 Ribosomal protein L22 signature. 101 125 - T 13-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0262 408b6ab8a5b535d30b558facea205be5 132 Gene3D G3DSA:3.90.470.10 18 132 9.6E-47 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Theam_0262 408b6ab8a5b535d30b558facea205be5 132 SUPERFAMILY SSF54843 15 127 8.37E-44 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Theam_0262 408b6ab8a5b535d30b558facea205be5 132 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 25 125 6.0E-42 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0262 408b6ab8a5b535d30b558facea205be5 132 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 20 128 27.869 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0262 408b6ab8a5b535d30b558facea205be5 132 Pfam PF00237 Ribosomal protein L22p/L17e 27 125 1.8E-39 T 13-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Theam_1635 cd7f59039bc18dbbe6821e45dba40651 404 Pfam PF01837 Homocysteine biosynthesis enzyme, sulfur-incorporation 23 381 1.9E-151 T 13-10-2018 IPR002708 Homocysteine biosynthesis enzyme, sulfur-incorporation Theam_1635 cd7f59039bc18dbbe6821e45dba40651 404 ProDom PD011569 METAL-BINDING IRON IRON-SULFUR 4FE-4S FERREDOXIN OXIDOREDUCTASE DOMAIN ELECTRON METHANOGENESIS A 22 319 1.0E-109 T 13-10-2018 IPR002708 Homocysteine biosynthesis enzyme, sulfur-incorporation Theam_1328 7aba15533723d3ea59da2e309d337612 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 302 36.271 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Theam_1328 7aba15533723d3ea59da2e309d337612 311 SUPERFAMILY SSF53671 1 303 9.43E-83 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Theam_1328 7aba15533723d3ea59da2e309d337612 311 Gene3D G3DSA:3.40.50.1370 4 296 2.5E-85 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Theam_1328 7aba15533723d3ea59da2e309d337612 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 131 148 8.0E-31 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Theam_1328 7aba15533723d3ea59da2e309d337612 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 38 60 8.0E-31 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Theam_1328 7aba15533723d3ea59da2e309d337612 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 257 262 8.0E-31 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Theam_1328 7aba15533723d3ea59da2e309d337612 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 76 85 8.0E-31 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Theam_1328 7aba15533723d3ea59da2e309d337612 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 215 224 8.0E-31 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Theam_1328 7aba15533723d3ea59da2e309d337612 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 281 295 8.0E-31 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Theam_1328 7aba15533723d3ea59da2e309d337612 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 48 55 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Theam_1328 7aba15533723d3ea59da2e309d337612 311 Gene3D G3DSA:3.40.50.1370 132 287 2.5E-85 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Theam_1328 7aba15533723d3ea59da2e309d337612 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 145 7.6E-41 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Theam_1328 7aba15533723d3ea59da2e309d337612 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 262 7.0E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Theam_1328 7aba15533723d3ea59da2e309d337612 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 7.0E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Theam_1328 7aba15533723d3ea59da2e309d337612 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 7.0E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Theam_1328 7aba15533723d3ea59da2e309d337612 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 7.0E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Theam_1328 7aba15533723d3ea59da2e309d337612 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 298 2.7E-17 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Theam_1328 7aba15533723d3ea59da2e309d337612 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 300 2.3E-87 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Theam_1628 229be039deee409074edf1a9bc6a8730 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 556 8.6E-201 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1628 229be039deee409074edf1a9bc6a8730 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 687 24.797 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1628 229be039deee409074edf1a9bc6a8730 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 320 336 7.7E-32 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1628 229be039deee409074edf1a9bc6a8730 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 7.7E-32 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1628 229be039deee409074edf1a9bc6a8730 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 397 416 7.7E-32 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1628 229be039deee409074edf1a9bc6a8730 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 7.7E-32 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1628 229be039deee409074edf1a9bc6a8730 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 248 263 7.7E-32 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1628 229be039deee409074edf1a9bc6a8730 689 SUPERFAMILY SSF109604 344 544 1.04E-7 T 13-10-2018 Theam_1628 229be039deee409074edf1a9bc6a8730 689 Pfam PF05746 DALR anticodon binding domain 607 678 3.9E-5 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Theam_1628 229be039deee409074edf1a9bc6a8730 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 4 687 2.0E-202 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1411 f52184be83dba660fd1247297152b97e 383 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 277 371 4.0E-24 T 13-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Theam_1411 f52184be83dba660fd1247297152b97e 383 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 246 8.2E-70 T 13-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Theam_1411 f52184be83dba660fd1247297152b97e 383 SUPERFAMILY SSF52922 270 381 4.43E-28 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Theam_1411 f52184be83dba660fd1247297152b97e 383 SUPERFAMILY SSF52518 7 261 6.38E-72 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Theam_1411 f52184be83dba660fd1247297152b97e 383 Gene3D G3DSA:3.40.50.970 4 194 2.5E-74 T 13-10-2018 Theam_1411 f52184be83dba660fd1247297152b97e 383 Gene3D G3DSA:3.40.50.920 265 380 1.6E-25 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Theam_1083 d060f0474fd80de3512f4e2112460607 481 SUPERFAMILY SSF50156 258 365 3.94E-29 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Theam_1083 d060f0474fd80de3512f4e2112460607 481 SMART SM00228 382 470 2.1E-10 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Theam_1083 d060f0474fd80de3512f4e2112460607 481 SMART SM00228 277 357 5.6E-20 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Theam_1083 d060f0474fd80de3512f4e2112460607 481 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 45 476 1.2E-144 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Theam_1083 d060f0474fd80de3512f4e2112460607 481 Gene3D G3DSA:2.30.42.10 389 480 2.1E-18 T 13-10-2018 Theam_1083 d060f0474fd80de3512f4e2112460607 481 PRINTS PR00834 HtrA/DegQ protease family signature 234 251 4.2E-53 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Theam_1083 d060f0474fd80de3512f4e2112460607 481 PRINTS PR00834 HtrA/DegQ protease family signature 315 327 4.2E-53 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Theam_1083 d060f0474fd80de3512f4e2112460607 481 PRINTS PR00834 HtrA/DegQ protease family signature 114 126 4.2E-53 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Theam_1083 d060f0474fd80de3512f4e2112460607 481 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 4.2E-53 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Theam_1083 d060f0474fd80de3512f4e2112460607 481 PRINTS PR00834 HtrA/DegQ protease family signature 177 201 4.2E-53 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Theam_1083 d060f0474fd80de3512f4e2112460607 481 PRINTS PR00834 HtrA/DegQ protease family signature 135 155 4.2E-53 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Theam_1083 d060f0474fd80de3512f4e2112460607 481 Pfam PF13365 Trypsin-like peptidase domain 102 241 6.1E-32 T 13-10-2018 Theam_1083 d060f0474fd80de3512f4e2112460607 481 Gene3D G3DSA:2.40.10.120 43 271 1.0E-78 T 13-10-2018 Theam_1083 d060f0474fd80de3512f4e2112460607 481 Gene3D G3DSA:2.30.42.10 272 376 4.2E-32 T 13-10-2018 Theam_1083 d060f0474fd80de3512f4e2112460607 481 SUPERFAMILY SSF50156 384 480 2.89E-15 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Theam_1083 d060f0474fd80de3512f4e2112460607 481 SUPERFAMILY SSF50494 10 286 2.5E-64 T 13-10-2018 IPR009003 Peptidase S1, PA clan Theam_1083 d060f0474fd80de3512f4e2112460607 481 Pfam PF13180 PDZ domain 385 461 9.2E-8 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Theam_1083 d060f0474fd80de3512f4e2112460607 481 Pfam PF13180 PDZ domain 278 365 2.3E-22 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Theam_0228 c121eeff67955082d28a97d52e96f449 140 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 72 4.5E-15 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Theam_0228 c121eeff67955082d28a97d52e96f449 140 Gene3D G3DSA:3.10.50.40 1 140 6.1E-43 T 13-10-2018 Theam_0228 c121eeff67955082d28a97d52e96f449 140 SUPERFAMILY SSF54534 3 136 2.75E-35 T 13-10-2018 Theam_0559 f3e3a342a992cc631ab637f7226871b9 441 SUPERFAMILY SSF102114 131 366 3.27E-53 T 13-10-2018 Theam_0559 f3e3a342a992cc631ab637f7226871b9 441 Pfam PF04055 Radical SAM superfamily 148 318 1.4E-23 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0559 f3e3a342a992cc631ab637f7226871b9 441 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 401 1.1E-133 T 13-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 Theam_0559 f3e3a342a992cc631ab637f7226871b9 441 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Theam_0559 f3e3a342a992cc631ab637f7226871b9 441 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 418 2.2E-118 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Theam_0559 f3e3a342a992cc631ab637f7226871b9 441 Gene3D G3DSA:3.40.50.12160 2 125 2.2E-24 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Theam_0559 f3e3a342a992cc631ab637f7226871b9 441 Gene3D G3DSA:3.80.30.20 140 374 5.8E-78 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Theam_0559 f3e3a342a992cc631ab637f7226871b9 441 Pfam PF00919 Uncharacterized protein family UPF0004 3 98 9.6E-27 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Theam_0559 f3e3a342a992cc631ab637f7226871b9 441 SMART SM00729 143 360 4.8E-48 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_1606 730ca396747edca388bc713f642a1d4d 113 PRINTS PR00124 ATP synthase C subunit signature 44 63 9.4E-17 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1606 730ca396747edca388bc713f642a1d4d 113 PRINTS PR00124 ATP synthase C subunit signature 65 80 9.4E-17 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1606 730ca396747edca388bc713f642a1d4d 113 PRINTS PR00124 ATP synthase C subunit signature 82 107 9.4E-17 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1606 730ca396747edca388bc713f642a1d4d 113 ProSitePatterns PS00605 ATP synthase c subunit signature. 72 93 - T 13-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1606 730ca396747edca388bc713f642a1d4d 113 Pfam PF00137 ATP synthase subunit C 43 106 5.8E-17 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Theam_1606 730ca396747edca388bc713f642a1d4d 113 SUPERFAMILY SSF81333 36 111 5.49E-21 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Theam_1606 730ca396747edca388bc713f642a1d4d 113 Hamap MF_01396 ATP synthase subunit c [atpH]. 42 107 15.779 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1606 730ca396747edca388bc713f642a1d4d 113 Gene3D G3DSA:1.20.20.10 35 113 5.1E-28 T 13-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1606 730ca396747edca388bc713f642a1d4d 113 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 52 109 1.1E-18 T 13-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Theam_0274 cc8d9c7b4dee1c5c57de724b61c84e7b 185 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 76 2.0E-29 T 13-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Theam_0274 cc8d9c7b4dee1c5c57de724b61c84e7b 185 Gene3D G3DSA:3.30.160.20 2 74 2.3E-29 T 13-10-2018 Theam_0274 cc8d9c7b4dee1c5c57de724b61c84e7b 185 Gene3D G3DSA:3.30.230.10 75 168 9.5E-34 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Theam_0274 cc8d9c7b4dee1c5c57de724b61c84e7b 185 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 5.8E-29 T 13-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Theam_0274 cc8d9c7b4dee1c5c57de724b61c84e7b 185 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 13-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site Theam_0274 cc8d9c7b4dee1c5c57de724b61c84e7b 185 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 11 164 6.8E-63 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Theam_0274 cc8d9c7b4dee1c5c57de724b61c84e7b 185 SUPERFAMILY SSF54768 11 77 7.53E-22 T 13-10-2018 Theam_0274 cc8d9c7b4dee1c5c57de724b61c84e7b 185 SUPERFAMILY SSF54211 80 159 1.09E-24 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_0274 cc8d9c7b4dee1c5c57de724b61c84e7b 185 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 33.781 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Theam_1159 45d91f18ccb1015a0a5cc113accb2a71 116 Pfam PF02561 Flagellar protein FliS 3 115 5.3E-33 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Theam_1159 45d91f18ccb1015a0a5cc113accb2a71 116 TIGRFAM TIGR00208 fliS: flagellar protein FliS 5 115 2.1E-18 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Theam_1159 45d91f18ccb1015a0a5cc113accb2a71 116 SUPERFAMILY SSF101116 3 115 3.27E-29 T 13-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Theam_1159 45d91f18ccb1015a0a5cc113accb2a71 116 PIRSF PIRSF039090 2 116 1.0E-27 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Theam_1159 45d91f18ccb1015a0a5cc113accb2a71 116 Gene3D G3DSA:1.20.120.340 1 116 2.8E-35 T 13-10-2018 Theam_1668 58cb3ecc74e0740bb28583e045f2ce04 635 SUPERFAMILY SSF51905 6 259 4.7E-49 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1668 58cb3ecc74e0740bb28583e045f2ce04 635 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Theam_1668 58cb3ecc74e0740bb28583e045f2ce04 635 Gene3D G3DSA:1.10.150.570 573 625 5.0E-17 T 13-10-2018 Theam_1668 58cb3ecc74e0740bb28583e045f2ce04 635 Pfam PF13932 GidA associated domain 402 618 4.6E-73 T 13-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 Theam_1668 58cb3ecc74e0740bb28583e045f2ce04 635 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 4 627 41.674 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Theam_1668 58cb3ecc74e0740bb28583e045f2ce04 635 Pfam PF01134 Glucose inhibited division protein A 7 399 6.9E-169 T 13-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Theam_1668 58cb3ecc74e0740bb28583e045f2ce04 635 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 6 624 2.2E-263 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Theam_1668 58cb3ecc74e0740bb28583e045f2ce04 635 SMART SM01228 550 620 5.9E-34 T 13-10-2018 Theam_1668 58cb3ecc74e0740bb28583e045f2ce04 635 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Theam_1668 58cb3ecc74e0740bb28583e045f2ce04 635 Gene3D G3DSA:1.10.10.1800 460 562 1.6E-24 T 13-10-2018 Theam_1668 58cb3ecc74e0740bb28583e045f2ce04 635 Gene3D G3DSA:3.50.50.60 2 218 4.4E-87 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1668 58cb3ecc74e0740bb28583e045f2ce04 635 Gene3D G3DSA:3.50.50.60 305 459 9.1E-55 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0606 2fcd117222573fb09d3e9e8f7ee6ee37 111 SMART SM00905 9 108 3.6E-8 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Theam_0606 2fcd117222573fb09d3e9e8f7ee6ee37 111 Pfam PF02152 Dihydroneopterin aldolase 9 107 1.9E-12 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Theam_0606 2fcd117222573fb09d3e9e8f7ee6ee37 111 Gene3D G3DSA:3.30.1130.10 4 111 5.1E-11 T 13-10-2018 Theam_0606 2fcd117222573fb09d3e9e8f7ee6ee37 111 SUPERFAMILY SSF55620 8 110 1.28E-12 T 13-10-2018 Theam_1057 a19d34ee1e29080b58704bb52dd44eb2 419 SUPERFAMILY SSF56281 5 404 7.47E-88 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_1057 a19d34ee1e29080b58704bb52dd44eb2 419 Pfam PF10996 Beta-Casp domain 240 355 1.3E-10 T 13-10-2018 IPR022712 Beta-Casp domain Theam_1057 a19d34ee1e29080b58704bb52dd44eb2 419 Gene3D G3DSA:3.40.50.10890 208 374 2.4E-102 T 13-10-2018 Theam_1057 a19d34ee1e29080b58704bb52dd44eb2 419 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 366 402 1.9E-8 T 13-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Theam_1057 a19d34ee1e29080b58704bb52dd44eb2 419 SMART SM00849 15 220 2.2E-19 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_1057 a19d34ee1e29080b58704bb52dd44eb2 419 Pfam PF00753 Metallo-beta-lactamase superfamily 15 179 1.4E-13 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_1057 a19d34ee1e29080b58704bb52dd44eb2 419 SMART SM01027 240 355 2.6E-10 T 13-10-2018 IPR022712 Beta-Casp domain Theam_1057 a19d34ee1e29080b58704bb52dd44eb2 419 Gene3D G3DSA:3.60.15.10 9 401 2.4E-102 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_0250 bfc2ef52dae47e726943c17d5af03aa1 511 Pfam PF08502 LeuA allosteric (dimerisation) domain 373 504 1.8E-32 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Theam_0250 bfc2ef52dae47e726943c17d5af03aa1 511 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 502 9.9E-219 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Theam_0250 bfc2ef52dae47e726943c17d5af03aa1 511 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 203 216 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Theam_0250 bfc2ef52dae47e726943c17d5af03aa1 511 Gene3D G3DSA:3.30.160.270 400 506 2.2E-10 T 13-10-2018 Theam_0250 bfc2ef52dae47e726943c17d5af03aa1 511 Pfam PF00682 HMGL-like 6 277 7.6E-101 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Theam_0250 bfc2ef52dae47e726943c17d5af03aa1 511 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Theam_0250 bfc2ef52dae47e726943c17d5af03aa1 511 SMART SM00917 373 505 1.6E-33 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Theam_0250 bfc2ef52dae47e726943c17d5af03aa1 511 Gene3D G3DSA:1.10.238.260 285 399 6.4E-37 T 13-10-2018 Theam_0250 bfc2ef52dae47e726943c17d5af03aa1 511 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 3 511 41.545 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Theam_0250 bfc2ef52dae47e726943c17d5af03aa1 511 SUPERFAMILY SSF110921 394 504 8.5E-23 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Theam_0250 bfc2ef52dae47e726943c17d5af03aa1 511 SUPERFAMILY SSF51569 4 295 1.14E-98 T 13-10-2018 Theam_0250 bfc2ef52dae47e726943c17d5af03aa1 511 Gene3D G3DSA:3.20.20.70 2 280 5.0E-112 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0257 979136c67a7a4e25e11e8643111e4210 207 ProSitePatterns PS00474 Ribosomal protein L3 signature. 103 126 - T 13-10-2018 IPR019926 Ribosomal protein L3, conserved site Theam_0257 979136c67a7a4e25e11e8643111e4210 207 Pfam PF00297 Ribosomal protein L3 93 181 1.2E-11 T 13-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0257 979136c67a7a4e25e11e8643111e4210 207 SUPERFAMILY SSF50447 1 205 1.68E-76 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Theam_0257 979136c67a7a4e25e11e8643111e4210 207 Gene3D G3DSA:2.40.30.10 132 206 3.5E-14 T 13-10-2018 Theam_0257 979136c67a7a4e25e11e8643111e4210 207 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 205 2.2E-87 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0257 979136c67a7a4e25e11e8643111e4210 207 Gene3D G3DSA:2.40.50.620 31 96 1.7E-14 T 13-10-2018 Theam_0257 979136c67a7a4e25e11e8643111e4210 207 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 38.027 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 Gene3D G3DSA:1.10.460.10 788 1175 2.5E-143 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 Pfam PF01131 DNA topoisomerase 781 1172 1.0E-88 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 Gene3D G3DSA:1.10.290.10 887 1009 2.5E-143 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 SUPERFAMILY SSF56712 608 1177 4.19E-138 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 SMART SM00437 877 1135 5.0E-80 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 SUPERFAMILY SSF52540 296 594 3.09E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 Gene3D G3DSA:3.40.50.140 611 787 4.6E-30 T 13-10-2018 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 TIGRFAM TIGR01054 rgy: reverse gyrase 6 1175 0.0 T 13-10-2018 IPR005736 Reverse gyrase GO:0003677|GO:0003916|GO:0006265 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 Hamap MF_01125 Reverse gyrase [rgy]. 1 1183 59.789 T 13-10-2018 IPR005736 Reverse gyrase GO:0003677|GO:0003916|GO:0006265 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 Gene3D G3DSA:3.40.50.300 496 596 1.3E-8 T 13-10-2018 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 Gene3D G3DSA:3.40.50.300 291 495 1.0E-23 T 13-10-2018 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 Gene3D G3DSA:2.60.510.20 839 1082 2.5E-143 T 13-10-2018 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 SMART SM00487 75 301 5.6E-17 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 SMART SM00436 758 842 5.1E-41 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 Pfam PF01751 Toprim domain 614 767 8.6E-22 T 13-10-2018 IPR006171 TOPRIM domain Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 Gene3D G3DSA:3.40.50.300 59 289 9.4E-77 T 13-10-2018 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 919 928 1.5E-28 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 731 744 1.5E-28 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 1098 1112 1.5E-28 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 817 835 1.5E-28 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 998 1014 1.5E-28 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 SMART SM00493 612 757 1.1E-27 T 13-10-2018 IPR006171 TOPRIM domain Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 Pfam PF00270 DEAD/DEAH box helicase 93 211 7.9E-9 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Theam_0906 c83d75d7ebd91e145e1038941dc129be 1192 SUPERFAMILY SSF52540 8 276 6.74E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0884 49f924b56bda050eb6acbec7d54abb8f 480 SUPERFAMILY SSF52540 267 471 7.04E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0884 49f924b56bda050eb6acbec7d54abb8f 480 Pfam PF02881 SRP54-type protein, helical bundle domain 195 253 2.2E-11 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Theam_0884 49f924b56bda050eb6acbec7d54abb8f 480 Gene3D G3DSA:3.40.50.300 270 459 4.5E-113 T 13-10-2018 Theam_0884 49f924b56bda050eb6acbec7d54abb8f 480 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 201 470 1.2E-109 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Theam_0884 49f924b56bda050eb6acbec7d54abb8f 480 SMART SM00962 270 471 2.5E-114 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Theam_0884 49f924b56bda050eb6acbec7d54abb8f 480 SUPERFAMILY SSF47364 176 251 2.36E-17 T 13-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Theam_0884 49f924b56bda050eb6acbec7d54abb8f 480 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 444 457 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Theam_0884 49f924b56bda050eb6acbec7d54abb8f 480 SMART SM00382 269 460 6.3E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0884 49f924b56bda050eb6acbec7d54abb8f 480 Gene3D G3DSA:1.20.120.140 178 469 4.5E-113 T 13-10-2018 Theam_0884 49f924b56bda050eb6acbec7d54abb8f 480 SMART SM00963 180 257 3.7E-19 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Theam_0884 49f924b56bda050eb6acbec7d54abb8f 480 Pfam PF00448 SRP54-type protein, GTPase domain 270 470 1.3E-78 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Theam_0884 49f924b56bda050eb6acbec7d54abb8f 480 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 200 471 62.333 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Theam_1034 7c19bc706b8e117566d894b7f9571c9a 446 Gene3D G3DSA:1.10.3080.10 38 433 1.6E-53 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Theam_1034 7c19bc706b8e117566d894b7f9571c9a 446 SUPERFAMILY SSF81340 31 428 3.4E-56 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Theam_1034 7c19bc706b8e117566d894b7f9571c9a 446 Pfam PF00654 Voltage gated chloride channel 86 419 3.0E-47 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_1034 7c19bc706b8e117566d894b7f9571c9a 446 PRINTS PR00762 Chloride channel signature 343 363 2.3E-17 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_1034 7c19bc706b8e117566d894b7f9571c9a 446 PRINTS PR00762 Chloride channel signature 122 141 2.3E-17 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_1034 7c19bc706b8e117566d894b7f9571c9a 446 PRINTS PR00762 Chloride channel signature 173 192 2.3E-17 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_1034 7c19bc706b8e117566d894b7f9571c9a 446 PRINTS PR00762 Chloride channel signature 373 389 2.3E-17 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_0449 d2aee2fb21d174762337ceefeaf854a6 303 SUPERFAMILY SSF53067 126 299 8.87E-41 T 13-10-2018 Theam_0449 d2aee2fb21d174762337ceefeaf854a6 303 Pfam PF02541 Ppx/GppA phosphatase family 16 299 1.8E-63 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Theam_0449 d2aee2fb21d174762337ceefeaf854a6 303 Gene3D G3DSA:3.30.420.150 123 302 6.2E-51 T 13-10-2018 Theam_0449 d2aee2fb21d174762337ceefeaf854a6 303 SUPERFAMILY SSF53067 2 117 2.75E-30 T 13-10-2018 Theam_0449 d2aee2fb21d174762337ceefeaf854a6 303 Gene3D G3DSA:3.30.420.40 1 120 1.3E-38 T 13-10-2018 Theam_0990 34aa75f2b9b66a6689b4fca7d619c3bb 360 SMART SM00382 126 251 1.2E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0990 34aa75f2b9b66a6689b4fca7d619c3bb 360 Pfam PF00437 Type II/IV secretion system protein 13 273 2.8E-44 T 13-10-2018 IPR001482 Type II/IV secretion system protein Theam_0990 34aa75f2b9b66a6689b4fca7d619c3bb 360 SUPERFAMILY SSF52540 8 343 1.76E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0990 34aa75f2b9b66a6689b4fca7d619c3bb 360 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 197 211 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Theam_0990 34aa75f2b9b66a6689b4fca7d619c3bb 360 Gene3D G3DSA:3.30.450.90 1 103 8.0E-36 T 13-10-2018 Theam_0990 34aa75f2b9b66a6689b4fca7d619c3bb 360 Gene3D G3DSA:3.40.50.300 104 359 5.8E-104 T 13-10-2018 Theam_0990 34aa75f2b9b66a6689b4fca7d619c3bb 360 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 349 2.5E-151 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 311 333 7.9E-102 T 13-10-2018 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 366 384 7.9E-102 T 13-10-2018 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 114 137 7.9E-102 T 13-10-2018 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 7.9E-102 T 13-10-2018 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 398 416 7.9E-102 T 13-10-2018 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 72 92 7.9E-102 T 13-10-2018 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 7.9E-102 T 13-10-2018 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 7.9E-102 T 13-10-2018 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 20 38 7.9E-102 T 13-10-2018 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 Gene3D G3DSA:1.10.3370.10 3 425 6.3E-167 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 PIRSF PIRSF004557 1 435 6.8E-131 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 7 429 30.087 T 13-10-2018 IPR026593 Protein translocase subunit SecY Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 Pfam PF00344 SecY translocase 73 412 9.2E-117 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 SUPERFAMILY SSF103491 7 418 5.62E-126 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 17 418 5.4E-129 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 ProSitePatterns PS00755 Protein secY signature 1. 73 92 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Theam_0277 d5f5f33ceb6f7f4fb376ef89513555cc 444 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Theam_0005 468b1854d18df11370be621c3e5311da 356 Pfam PF13439 Glycosyltransferase Family 4 14 158 5.1E-14 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Theam_0005 468b1854d18df11370be621c3e5311da 356 SUPERFAMILY SSF53756 3 355 1.44E-75 T 13-10-2018 Theam_0005 468b1854d18df11370be621c3e5311da 356 Gene3D G3DSA:3.40.50.2000 155 337 4.3E-68 T 13-10-2018 Theam_0005 468b1854d18df11370be621c3e5311da 356 Gene3D G3DSA:3.40.50.2000 24 350 4.3E-68 T 13-10-2018 Theam_0005 468b1854d18df11370be621c3e5311da 356 Pfam PF00534 Glycosyl transferases group 1 176 331 2.2E-40 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Theam_0741 9768ccdb0ae19f5d3baa22946e5e324b 159 Gene3D G3DSA:1.20.120.1200 2 156 5.7E-33 T 13-10-2018 Theam_0741 9768ccdb0ae19f5d3baa22946e5e324b 159 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 153 8.4E-26 T 13-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1763 79be1d43aad0a7f21a13fc9b2f5f677f 279 SUPERFAMILY SSF56349 2 271 1.8E-43 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Theam_1763 79be1d43aad0a7f21a13fc9b2f5f677f 279 Gene3D G3DSA:1.10.443.10 101 277 5.9E-37 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Theam_1763 79be1d43aad0a7f21a13fc9b2f5f677f 279 Pfam PF00589 Phage integrase family 111 261 2.0E-24 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Theam_0106 6bf905ac41382954eac2cbb2920ecced 423 PIRSF PIRSF000478 2 423 1.3E-141 T 13-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0106 6bf905ac41382954eac2cbb2920ecced 423 Gene3D G3DSA:3.40.1030.10 76 320 1.6E-121 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0106 6bf905ac41382954eac2cbb2920ecced 423 Gene3D G3DSA:1.20.970.10 2 67 9.5E-27 T 13-10-2018 Theam_0106 6bf905ac41382954eac2cbb2920ecced 423 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 109 124 - T 13-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0106 6bf905ac41382954eac2cbb2920ecced 423 SUPERFAMILY SSF52418 71 319 6.02E-73 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0106 6bf905ac41382954eac2cbb2920ecced 423 SUPERFAMILY SSF47648 4 69 2.62E-21 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0106 6bf905ac41382954eac2cbb2920ecced 423 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 66 2.3E-23 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0106 6bf905ac41382954eac2cbb2920ecced 423 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 402 6.6E-145 T 13-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0106 6bf905ac41382954eac2cbb2920ecced 423 SMART SM00941 335 408 1.7E-22 T 13-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0106 6bf905ac41382954eac2cbb2920ecced 423 Pfam PF00591 Glycosyl transferase family, a/b domain 76 303 1.1E-32 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0106 6bf905ac41382954eac2cbb2920ecced 423 Gene3D G3DSA:3.90.1170.30 321 409 1.6E-121 T 13-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0106 6bf905ac41382954eac2cbb2920ecced 423 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 335 406 2.4E-18 T 13-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0106 6bf905ac41382954eac2cbb2920ecced 423 SUPERFAMILY SSF54680 322 422 1.57E-22 T 13-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 5 477 2.4E-167 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 Pfam PF01926 50S ribosome-binding GTPase 7 122 3.8E-30 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 Pfam PF01926 50S ribosome-binding GTPase 223 340 5.7E-27 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 Gene3D G3DSA:3.40.50.300 3 165 1.6E-48 T 13-10-2018 Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 224 244 1.0E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 293 311 1.0E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 SUPERFAMILY SSF52540 189 478 3.6E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 Hamap MF_00195 GTPase Der [der]. 4 479 37.262 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 221 387 1.2E-27 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 158 1.2E-27 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 SMART SM00382 220 471 0.27 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 SMART SM00382 3 150 0.34 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 PIRSF PIRSF006485 3 479 6.3E-168 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 Gene3D G3DSA:3.40.50.300 216 395 1.8E-51 T 13-10-2018 Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 SUPERFAMILY SSF52540 6 171 3.72E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 Gene3D G3DSA:3.30.300.20 397 479 1.5E-29 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Theam_0692 c64aeaa2541d9d1470edc2eea808647f 479 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 397 477 1.8E-29 T 13-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Theam_1644 03efc3ca13be55a58f296b984e566a3a 769 Gene3D G3DSA:1.10.8.630 2 113 4.1E-22 T 13-10-2018 Theam_1644 03efc3ca13be55a58f296b984e566a3a 769 Gene3D G3DSA:3.40.50.300 251 433 1.4E-59 T 13-10-2018 Theam_1644 03efc3ca13be55a58f296b984e566a3a 769 TIGRFAM TIGR00595 priA: primosomal protein N' 277 721 2.4E-132 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Theam_1644 03efc3ca13be55a58f296b984e566a3a 769 SMART SM00487 254 448 4.7E-13 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Theam_1644 03efc3ca13be55a58f296b984e566a3a 769 SMART SM00490 548 645 3.7E-5 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_1644 03efc3ca13be55a58f296b984e566a3a 769 SUPERFAMILY SSF52540 231 429 4.35E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1644 03efc3ca13be55a58f296b984e566a3a 769 SUPERFAMILY SSF52540 511 690 1.31E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1644 03efc3ca13be55a58f296b984e566a3a 769 Hamap MF_00983 Probable primosomal protein N' [priA]. 5 768 20.953 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Theam_1585 cefdef6dde3325b121d1da124889e2ee 60 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 5 56 3.8E-19 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Theam_1585 cefdef6dde3325b121d1da124889e2ee 60 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 6 34 - T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Theam_1585 cefdef6dde3325b121d1da124889e2ee 60 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 4 58 5.2E-20 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Theam_1585 cefdef6dde3325b121d1da124889e2ee 60 Hamap MF_00422 Protein translocase subunit SecE [secE]. 1 56 13.198 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Theam_1585 cefdef6dde3325b121d1da124889e2ee 60 Gene3D G3DSA:1.20.5.1030 2 57 9.9E-21 T 13-10-2018 IPR038379 SecE superfamily Theam_0235 95bbc79d32b52830c6f268a1f7d82540 399 SUPERFAMILY SSF88697 3 71 2.15E-16 T 13-10-2018 IPR015947 PUA-like superfamily Theam_0235 95bbc79d32b52830c6f268a1f7d82540 399 Gene3D G3DSA:3.30.750.80 72 179 2.2E-36 T 13-10-2018 Theam_0235 95bbc79d32b52830c6f268a1f7d82540 399 SUPERFAMILY SSF53335 78 391 1.18E-71 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_0235 95bbc79d32b52830c6f268a1f7d82540 399 SMART SM00359 2 87 8.9E-13 T 13-10-2018 IPR002478 PUA domain GO:0003723 Theam_0235 95bbc79d32b52830c6f268a1f7d82540 399 Gene3D G3DSA:2.30.130.10 2 70 1.3E-22 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 Theam_0235 95bbc79d32b52830c6f268a1f7d82540 399 Gene3D G3DSA:3.40.50.150 180 395 4.1E-67 T 13-10-2018 Theam_0235 95bbc79d32b52830c6f268a1f7d82540 399 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 113 352 2.2E-24 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Theam_1249 4a3c1d477ab0f25cd9700f3456253530 419 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 186 346 2.8E-58 T 13-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Theam_1249 4a3c1d477ab0f25cd9700f3456253530 419 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 1 419 49.298 T 13-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 Theam_1249 4a3c1d477ab0f25cd9700f3456253530 419 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 75 89 - T 13-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Theam_1249 4a3c1d477ab0f25cd9700f3456253530 419 Gene3D G3DSA:3.40.50.1480 5 408 4.1E-183 T 13-10-2018 Theam_1249 4a3c1d477ab0f25cd9700f3456253530 419 Gene3D G3DSA:3.40.50.720 188 347 4.1E-183 T 13-10-2018 Theam_1249 4a3c1d477ab0f25cd9700f3456253530 419 SMART SM00997 186 347 3.5E-118 T 13-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Theam_1249 4a3c1d477ab0f25cd9700f3456253530 419 SUPERFAMILY SSF52283 1 419 2.66E-97 T 13-10-2018 Theam_1249 4a3c1d477ab0f25cd9700f3456253530 419 SUPERFAMILY SSF51735 186 348 3.55E-72 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_1249 4a3c1d477ab0f25cd9700f3456253530 419 PIRSF PIRSF001109 1 419 1.9E-191 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Theam_1249 4a3c1d477ab0f25cd9700f3456253530 419 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 2 136 5.3E-35 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Theam_1249 4a3c1d477ab0f25cd9700f3456253530 419 SMART SM00996 2 418 1.2E-153 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Theam_1249 4a3c1d477ab0f25cd9700f3456253530 419 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 208 224 - T 13-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Theam_1249 4a3c1d477ab0f25cd9700f3456253530 419 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 3 419 1.4E-209 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Theam_1689 f2b46fa977cade8975ed64e88a7c72b0 162 Pfam PF02576 RimP N-terminal domain 15 88 1.4E-26 T 13-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Theam_1689 f2b46fa977cade8975ed64e88a7c72b0 162 Gene3D G3DSA:3.30.300.70 3 85 8.2E-29 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily Theam_1689 f2b46fa977cade8975ed64e88a7c72b0 162 SUPERFAMILY SSF75420 6 88 9.55E-24 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily Theam_1689 f2b46fa977cade8975ed64e88a7c72b0 162 Gene3D G3DSA:2.30.30.180 92 156 4.3E-8 T 13-10-2018 Theam_1689 f2b46fa977cade8975ed64e88a7c72b0 162 Pfam PF17384 RimP C-terminal SH3 domain 91 155 4.1E-15 T 13-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Theam_1689 f2b46fa977cade8975ed64e88a7c72b0 162 SUPERFAMILY SSF74942 89 155 4.71E-15 T 13-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Theam_1689 f2b46fa977cade8975ed64e88a7c72b0 162 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 10 158 24.382 T 13-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 SUPERFAMILY SSF51735 1 128 1.81E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 PIRSF PIRSF001553 1 297 4.3E-135 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 SUPERFAMILY SSF52210 129 291 6.15E-57 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 Gene3D G3DSA:3.40.50.261 130 295 1.8E-75 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 SMART SM00881 4 106 7.5E-36 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 158 187 - T 13-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 PRINTS PR01798 Succinyl-CoA synthase signature 214 227 8.2E-38 T 13-10-2018 Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 PRINTS PR01798 Succinyl-CoA synthase signature 183 201 8.2E-38 T 13-10-2018 Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 PRINTS PR01798 Succinyl-CoA synthase signature 246 263 8.2E-38 T 13-10-2018 Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 PRINTS PR01798 Succinyl-CoA synthase signature 88 105 8.2E-38 T 13-10-2018 Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 242 255 - T 13-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 Gene3D G3DSA:3.40.50.720 1 129 8.2E-52 T 13-10-2018 Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 294 44.701 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 Pfam PF02629 CoA binding domain 6 105 1.1E-28 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 Pfam PF00549 CoA-ligase 157 277 4.5E-22 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Theam_1409 929752fe5f6a8b85dc6f5dcd6496ec28 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 294 9.3E-142 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Theam_0265 0f82d9a2dd020434ef6c65ea3fc4c06b 66 SUPERFAMILY SSF46561 6 64 2.22E-20 T 13-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0265 0f82d9a2dd020434ef6c65ea3fc4c06b 66 TIGRFAM TIGR00012 L29: ribosomal protein uL29 7 62 4.3E-23 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0265 0f82d9a2dd020434ef6c65ea3fc4c06b 66 Pfam PF00831 Ribosomal L29 protein 7 62 6.2E-24 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0265 0f82d9a2dd020434ef6c65ea3fc4c06b 66 ProSitePatterns PS00579 Ribosomal protein L29 signature. 41 55 - T 13-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0265 0f82d9a2dd020434ef6c65ea3fc4c06b 66 Gene3D G3DSA:1.10.287.310 1 65 2.3E-25 T 13-10-2018 Theam_0265 0f82d9a2dd020434ef6c65ea3fc4c06b 66 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 2 62 17.468 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0860 037a83f9b8dadf20793ab2d2a1a5637c 420 Gene3D G3DSA:2.40.50.100 49 76 1.8E-11 T 13-10-2018 Theam_0860 037a83f9b8dadf20793ab2d2a1a5637c 420 Gene3D G3DSA:1.10.287.470 146 228 1.3E-12 T 13-10-2018 Theam_0860 037a83f9b8dadf20793ab2d2a1a5637c 420 SUPERFAMILY SSF111369 226 354 3.66E-6 T 13-10-2018 Theam_0860 037a83f9b8dadf20793ab2d2a1a5637c 420 Pfam PF13533 Biotin-lipoyl like 49 91 1.5E-11 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Theam_0860 037a83f9b8dadf20793ab2d2a1a5637c 420 Pfam PF13437 HlyD family secretion protein 294 371 1.7E-9 T 13-10-2018 Theam_0860 037a83f9b8dadf20793ab2d2a1a5637c 420 Gene3D G3DSA:2.40.30.170 309 420 9.4E-21 T 13-10-2018 Theam_0860 037a83f9b8dadf20793ab2d2a1a5637c 420 Gene3D G3DSA:1.10.287.470 77 143 1.8E-11 T 13-10-2018 Theam_0860 037a83f9b8dadf20793ab2d2a1a5637c 420 SUPERFAMILY SSF111369 48 137 8.76E-5 T 13-10-2018 Theam_0217 b9882386d291e70f1600114b3d33176c 298 SUPERFAMILY SSF111321 1 286 3.01E-82 T 13-10-2018 IPR036075 AF1104-like superfamily Theam_0217 b9882386d291e70f1600114b3d33176c 298 PIRSF PIRSF006593 1 289 2.0E-87 T 13-10-2018 IPR014444 Uncharacterised conserved protein UCP006593 Theam_0217 b9882386d291e70f1600114b3d33176c 298 Gene3D G3DSA:3.40.50.10880 140 290 4.9E-51 T 13-10-2018 Theam_0217 b9882386d291e70f1600114b3d33176c 298 Gene3D G3DSA:1.10.285.20 69 137 6.5E-19 T 13-10-2018 Theam_0217 b9882386d291e70f1600114b3d33176c 298 Pfam PF01937 Protein of unknown function DUF89 5 280 1.9E-45 T 13-10-2018 IPR002791 Domain of unknown function DUF89 Theam_1116 9cdf324add72fb515a7e72fb6d3f56da 747 Gene3D G3DSA:3.90.870.50 5 360 6.5E-154 T 13-10-2018 Theam_1116 9cdf324add72fb515a7e72fb6d3f56da 747 SUPERFAMILY SSF53067 410 743 4.21E-6 T 13-10-2018 Theam_1116 9cdf324add72fb515a7e72fb6d3f56da 747 SUPERFAMILY SSF54975 2 87 3.71E-24 T 13-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Theam_1116 9cdf324add72fb515a7e72fb6d3f56da 747 Pfam PF01300 Telomere recombination 209 381 1.3E-54 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Theam_1116 9cdf324add72fb515a7e72fb6d3f56da 747 Pfam PF07503 HypF finger 155 188 7.8E-19 T 13-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 Theam_1116 9cdf324add72fb515a7e72fb6d3f56da 747 Pfam PF07503 HypF finger 105 138 6.5E-18 T 13-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 Theam_1116 9cdf324add72fb515a7e72fb6d3f56da 747 Pfam PF00708 Acylphosphatase 4 86 2.5E-23 T 13-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Theam_1116 9cdf324add72fb515a7e72fb6d3f56da 747 ProSitePatterns PS00150 Acylphosphatase signature 1. 7 17 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Theam_1116 9cdf324add72fb515a7e72fb6d3f56da 747 SUPERFAMILY SSF55821 172 389 2.04E-52 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Theam_1116 9cdf324add72fb515a7e72fb6d3f56da 747 Gene3D G3DSA:3.30.420.360 381 742 8.3E-131 T 13-10-2018 Theam_1116 9cdf324add72fb515a7e72fb6d3f56da 747 PIRSF PIRSF006256 1 747 7.8E-295 T 13-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 Theam_1116 9cdf324add72fb515a7e72fb6d3f56da 747 Gene3D G3DSA:3.30.420.350 482 730 8.3E-131 T 13-10-2018 Theam_1116 9cdf324add72fb515a7e72fb6d3f56da 747 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 7 742 1.2E-258 T 13-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 Theam_1116 9cdf324add72fb515a7e72fb6d3f56da 747 Gene3D G3DSA:3.30.110.120 251 369 6.5E-154 T 13-10-2018 Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 SUPERFAMILY SSF49299 515 604 3.53E-13 T 13-10-2018 IPR035986 PKD domain superfamily Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 Gene3D G3DSA:2.60.40.10 436 511 2.1E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 SMART SM00645 56 297 0.0027 T 13-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 SMART SM00089 429 514 2.0E-12 T 13-10-2018 IPR022409 PKD/Chitinase domain Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 SMART SM00089 518 606 3.0E-13 T 13-10-2018 IPR022409 PKD/Chitinase domain Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 SMART SM00089 610 698 9.1E-11 T 13-10-2018 IPR022409 PKD/Chitinase domain Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 SUPERFAMILY SSF49299 420 513 6.54E-14 T 13-10-2018 IPR035986 PKD domain superfamily Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 SUPERFAMILY SSF54001 43 283 2.88E-34 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 SUPERFAMILY SSF49299 609 696 1.44E-13 T 13-10-2018 IPR035986 PKD domain superfamily Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 Pfam PF00112 Papain family cysteine protease 57 283 2.9E-10 T 13-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 Gene3D G3DSA:3.90.70.10 24 296 2.3E-55 T 13-10-2018 Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 Gene3D G3DSA:2.60.40.10 512 604 3.4E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 Gene3D G3DSA:2.60.40.10 605 698 6.2E-13 T 13-10-2018 IPR013783 Immunoglobulin-like fold Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 Pfam PF00801 PKD domain 531 596 4.1E-6 T 13-10-2018 IPR000601 PKD domain Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 Pfam PF00801 PKD domain 614 687 1.0E-5 T 13-10-2018 IPR000601 PKD domain Theam_0533 7a0b7cc2ded2c6ae915aae578154c989 743 Pfam PF00801 PKD domain 436 500 2.9E-8 T 13-10-2018 IPR000601 PKD domain Theam_0014 34216019aec49ffe07b3456374793912 258 Pfam PF08862 Domain of unknown function DUF1829 163 249 5.1E-22 T 13-10-2018 IPR014961 Domain of unknown function DUF1829 Theam_0014 34216019aec49ffe07b3456374793912 258 Pfam PF08861 Domain of unknown function DUF1828 35 124 9.0E-23 T 13-10-2018 IPR014960 Domain of unknown function DUF1828 Theam_0456 ad8e0c53f1af97e44ae07e498929fb96 112 Pfam PF01022 Bacterial regulatory protein, arsR family 24 70 6.7E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_0456 ad8e0c53f1af97e44ae07e498929fb96 112 SUPERFAMILY SSF46785 14 89 4.64E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0456 ad8e0c53f1af97e44ae07e498929fb96 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 9.3E-6 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_0456 ad8e0c53f1af97e44ae07e498929fb96 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 19 34 9.3E-6 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_0456 ad8e0c53f1af97e44ae07e498929fb96 112 Gene3D G3DSA:1.10.10.10 6 108 1.0E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0456 ad8e0c53f1af97e44ae07e498929fb96 112 SMART SM00418 17 96 5.2E-7 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1255 f2ca098656faa0857f51ab2bdb97c066 201 Pfam PF02674 Colicin V production protein 9 138 4.5E-23 T 13-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Theam_1554 025c87cf3c143409538aa5c6f6e08eec 764 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 149 225 1.0E-16 T 13-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_1554 025c87cf3c143409538aa5c6f6e08eec 764 SUPERFAMILY SSF48168 9 224 7.32E-59 T 13-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_1554 025c87cf3c143409538aa5c6f6e08eec 764 SUPERFAMILY SSF51998 227 752 1.77E-151 T 13-10-2018 Theam_1554 025c87cf3c143409538aa5c6f6e08eec 764 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 152 745 6.3E-173 T 13-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_1554 025c87cf3c143409538aa5c6f6e08eec 764 Pfam PF02867 Ribonucleotide reductase, barrel domain 228 742 3.2E-132 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_1554 025c87cf3c143409538aa5c6f6e08eec 764 PRINTS PR01183 Ribonucleotide reductase large chain signature 558 581 8.0E-34 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_1554 025c87cf3c143409538aa5c6f6e08eec 764 PRINTS PR01183 Ribonucleotide reductase large chain signature 303 322 8.0E-34 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_1554 025c87cf3c143409538aa5c6f6e08eec 764 PRINTS PR01183 Ribonucleotide reductase large chain signature 626 653 8.0E-34 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_1554 025c87cf3c143409538aa5c6f6e08eec 764 PRINTS PR01183 Ribonucleotide reductase large chain signature 441 452 8.0E-34 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_1554 025c87cf3c143409538aa5c6f6e08eec 764 PRINTS PR01183 Ribonucleotide reductase large chain signature 493 516 8.0E-34 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_1554 025c87cf3c143409538aa5c6f6e08eec 764 PRINTS PR01183 Ribonucleotide reductase large chain signature 531 553 8.0E-34 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_1554 025c87cf3c143409538aa5c6f6e08eec 764 Pfam PF03477 ATP cone domain 4 90 1.9E-16 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Theam_1554 025c87cf3c143409538aa5c6f6e08eec 764 Gene3D G3DSA:3.20.70.20 76 753 7.8E-184 T 13-10-2018 Theam_0292 3a16f27211f17df95a640d4e93d09f76 351 Hamap MF_01947 N(4)-bis(aminopropyl)spermidine synthase [bpsA]. 18 351 50.482 T 13-10-2018 IPR014435 N(4)-bis(aminopropyl)spermidine synthase GO:0006596|GO:0016765 Theam_0292 3a16f27211f17df95a640d4e93d09f76 351 Pfam PF01861 Protein of unknown function DUF43 112 350 3.2E-105 T 13-10-2018 IPR002723 N(4)-bis(aminopropyl)spermidine synthase, C-terminal Theam_0292 3a16f27211f17df95a640d4e93d09f76 351 SUPERFAMILY SSF53335 114 237 1.67E-9 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_0292 3a16f27211f17df95a640d4e93d09f76 351 Gene3D G3DSA:1.10.10.10 3 86 9.6E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0292 3a16f27211f17df95a640d4e93d09f76 351 Gene3D G3DSA:3.40.50.150 106 328 2.2E-80 T 13-10-2018 Theam_0292 3a16f27211f17df95a640d4e93d09f76 351 PIRSF PIRSF005895 1 351 6.6E-142 T 13-10-2018 IPR014435 N(4)-bis(aminopropyl)spermidine synthase GO:0006596|GO:0016765 Theam_1638 ce96a8a38d7e2b7978b633f5d57d67bd 281 Gene3D G3DSA:3.30.70.890 160 277 4.1E-20 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Theam_1638 ce96a8a38d7e2b7978b633f5d57d67bd 281 Pfam PF08544 GHMP kinases C terminal 209 262 3.0E-4 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain Theam_1638 ce96a8a38d7e2b7978b633f5d57d67bd 281 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 263 8.5E-67 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Theam_1638 ce96a8a38d7e2b7978b633f5d57d67bd 281 PIRSF PIRSF010376 1 267 8.7E-81 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Theam_1638 ce96a8a38d7e2b7978b633f5d57d67bd 281 Gene3D G3DSA:3.30.230.10 1 157 8.1E-60 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Theam_1638 ce96a8a38d7e2b7978b633f5d57d67bd 281 SUPERFAMILY SSF55060 159 275 2.21E-14 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Theam_1638 ce96a8a38d7e2b7978b633f5d57d67bd 281 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 280 30.878 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Theam_1638 ce96a8a38d7e2b7978b633f5d57d67bd 281 SUPERFAMILY SSF54211 1 154 8.35E-48 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_1638 ce96a8a38d7e2b7978b633f5d57d67bd 281 Pfam PF00288 GHMP kinases N terminal domain 86 143 1.6E-10 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Theam_1544 c3ac2071931dcd94093a2b7d2fa13850 382 PIRSF PIRSF001456 1 379 2.7E-128 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Theam_1544 c3ac2071931dcd94093a2b7d2fa13850 382 Pfam PF01264 Chorismate synthase 2 366 3.3E-120 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Theam_1544 c3ac2071931dcd94093a2b7d2fa13850 382 Hamap MF_00300 Chorismate synthase [aroC]. 2 373 35.973 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Theam_1544 c3ac2071931dcd94093a2b7d2fa13850 382 ProSitePatterns PS00789 Chorismate synthase signature 3. 340 356 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Theam_1544 c3ac2071931dcd94093a2b7d2fa13850 382 SUPERFAMILY SSF103263 1 378 4.97E-138 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Theam_1544 c3ac2071931dcd94093a2b7d2fa13850 382 Gene3D G3DSA:3.60.150.10 1 381 4.8E-149 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Theam_1544 c3ac2071931dcd94093a2b7d2fa13850 382 TIGRFAM TIGR00033 aroC: chorismate synthase 2 368 4.2E-121 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Theam_1544 c3ac2071931dcd94093a2b7d2fa13850 382 ProSitePatterns PS00788 Chorismate synthase signature 2. 128 144 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Theam_0492 c52e7c4964cedaf442be8660ba50d609 197 Pfam PF02441 Flavoprotein 3 169 2.8E-26 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Theam_0492 c52e7c4964cedaf442be8660ba50d609 197 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 4 178 1.6E-52 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Theam_0492 c52e7c4964cedaf442be8660ba50d609 197 SUPERFAMILY SSF52507 3 178 2.49E-50 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Theam_0492 c52e7c4964cedaf442be8660ba50d609 197 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 3 191 32.123 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Theam_0492 c52e7c4964cedaf442be8660ba50d609 197 Gene3D G3DSA:3.40.50.1950 1 194 9.8E-69 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Theam_0393 a1e4707caf64e43cbd31023878283cdd 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 9.9E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Theam_0393 a1e4707caf64e43cbd31023878283cdd 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 9.9E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Theam_0393 a1e4707caf64e43cbd31023878283cdd 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 9.9E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Theam_0393 a1e4707caf64e43cbd31023878283cdd 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 9.9E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Theam_0393 a1e4707caf64e43cbd31023878283cdd 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 9.9E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Theam_0393 a1e4707caf64e43cbd31023878283cdd 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 9.9E-52 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Theam_0393 a1e4707caf64e43cbd31023878283cdd 242 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 241 1.1E-99 T 13-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Theam_0393 a1e4707caf64e43cbd31023878283cdd 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.3E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Theam_0393 a1e4707caf64e43cbd31023878283cdd 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.3E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Theam_0393 a1e4707caf64e43cbd31023878283cdd 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.3E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Theam_0393 a1e4707caf64e43cbd31023878283cdd 242 Gene3D G3DSA:3.40.50.720 2 241 4.2E-91 T 13-10-2018 Theam_0393 a1e4707caf64e43cbd31023878283cdd 242 SUPERFAMILY SSF51735 6 241 1.52E-91 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0393 a1e4707caf64e43cbd31023878283cdd 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 241 3.7E-72 T 13-10-2018 Theam_0393 a1e4707caf64e43cbd31023878283cdd 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Theam_0393 a1e4707caf64e43cbd31023878283cdd 242 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 182 1.0E-7 T 13-10-2018 Theam_0762 ea6fd09430cf7c097fb49785b57e0690 684 TIGRFAM TIGR00277 HDIG: HDIG domain 464 560 2.7E-25 T 13-10-2018 IPR006675 HDIG domain Theam_0762 ea6fd09430cf7c097fb49785b57e0690 684 SUPERFAMILY SSF109604 463 609 3.66E-16 T 13-10-2018 Theam_0762 ea6fd09430cf7c097fb49785b57e0690 684 Pfam PF07698 7TM receptor with intracellular HD hydrolase 244 441 1.2E-11 T 13-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain Theam_0762 ea6fd09430cf7c097fb49785b57e0690 684 Pfam PF07697 7TM-HD extracellular 41 231 3.4E-30 T 13-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain Theam_0762 ea6fd09430cf7c097fb49785b57e0690 684 SMART SM00471 462 617 2.3E-10 T 13-10-2018 IPR003607 HD/PDEase domain Theam_0762 ea6fd09430cf7c097fb49785b57e0690 684 Pfam PF01966 HD domain 466 607 4.5E-20 T 13-10-2018 IPR006674 HD domain Theam_0762 ea6fd09430cf7c097fb49785b57e0690 684 Gene3D G3DSA:1.10.3210.10 430 638 1.3E-23 T 13-10-2018 Theam_0719 30841e1d8e90ed7f64392525224eee02 245 Gene3D G3DSA:3.90.550.10 3 244 4.0E-82 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0719 30841e1d8e90ed7f64392525224eee02 245 Pfam PF02348 Cytidylyltransferase 5 212 4.0E-55 T 13-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 Theam_0719 30841e1d8e90ed7f64392525224eee02 245 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 2 238 35.375 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Theam_0719 30841e1d8e90ed7f64392525224eee02 245 SUPERFAMILY SSF53448 4 242 1.53E-56 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0719 30841e1d8e90ed7f64392525224eee02 245 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 231 7.8E-66 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 11 25 1.5E-5 T 13-10-2018 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 82 98 1.5E-5 T 13-10-2018 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 52 66 1.5E-5 T 13-10-2018 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 518 3.8E-159 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 Pfam PF00117 Glutamine amidotransferase class-I 13 193 2.1E-47 T 13-10-2018 IPR017926 Glutamine amidotransferase Theam_0171 86cad61107fe5807ad81da3af03e946a 518 SUPERFAMILY SSF52317 9 230 2.55E-64 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Theam_0171 86cad61107fe5807ad81da3af03e946a 518 PRINTS PR00096 Glutamine amidotransferase superfamily signature 170 183 3.9E-8 T 13-10-2018 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 PRINTS PR00096 Glutamine amidotransferase superfamily signature 82 93 3.9E-8 T 13-10-2018 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 PRINTS PR00096 Glutamine amidotransferase superfamily signature 55 64 3.9E-8 T 13-10-2018 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 SUPERFAMILY SSF54810 398 518 2.62E-55 T 13-10-2018 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 11 198 7.2E-85 T 13-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 Gene3D G3DSA:3.40.50.880 3 198 7.3E-62 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Theam_0171 86cad61107fe5807ad81da3af03e946a 518 Pfam PF02540 NAD synthase 212 247 4.0E-5 T 13-10-2018 IPR022310 NAD/GMP synthase Theam_0171 86cad61107fe5807ad81da3af03e946a 518 Pfam PF00958 GMP synthase C terminal domain 426 517 4.4E-47 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 Gene3D G3DSA:3.30.300.10 399 518 2.8E-55 T 13-10-2018 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 8 518 57.207 T 13-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 Gene3D G3DSA:3.40.50.620 202 398 3.3E-82 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_0171 86cad61107fe5807ad81da3af03e946a 518 PRINTS PR00097 Anthranilate synthase component II signature 170 183 1.3E-6 T 13-10-2018 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 PRINTS PR00097 Anthranilate synthase component II signature 55 64 1.3E-6 T 13-10-2018 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 PRINTS PR00097 Anthranilate synthase component II signature 82 93 1.3E-6 T 13-10-2018 Theam_0171 86cad61107fe5807ad81da3af03e946a 518 SUPERFAMILY SSF52402 186 439 1.15E-59 T 13-10-2018 Theam_1430 ff0239a87baf3a3b7e5a06cd5545e6f1 173 Pfam PF00719 Inorganic pyrophosphatase 18 172 5.5E-61 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Theam_1430 ff0239a87baf3a3b7e5a06cd5545e6f1 173 Gene3D G3DSA:3.90.80.10 1 173 1.0E-74 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Theam_1430 ff0239a87baf3a3b7e5a06cd5545e6f1 173 SUPERFAMILY SSF50324 6 171 1.57E-69 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Theam_1430 ff0239a87baf3a3b7e5a06cd5545e6f1 173 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 173 38.874 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Theam_1430 ff0239a87baf3a3b7e5a06cd5545e6f1 173 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 65 71 - T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Theam_0550 a23452d4f00a2394cef5d39ecc26eaac 388 Pfam PF07282 Putative transposase DNA-binding domain 293 361 1.3E-25 T 13-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Theam_0550 a23452d4f00a2394cef5d39ecc26eaac 388 Pfam PF01385 Probable transposase 171 265 3.8E-11 T 13-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 Theam_0550 a23452d4f00a2394cef5d39ecc26eaac 388 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 241 320 8.5E-22 T 13-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Theam_0502 298bbdaf88c2b7fbce52e08f317f2fcf 484 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 480 35.98 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Theam_0502 298bbdaf88c2b7fbce52e08f317f2fcf 484 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 320 6.2E-115 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Theam_0502 298bbdaf88c2b7fbce52e08f317f2fcf 484 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 478 2.9E-183 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Theam_0502 298bbdaf88c2b7fbce52e08f317f2fcf 484 SUPERFAMILY SSF48163 314 479 2.35E-40 T 13-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Theam_0502 298bbdaf88c2b7fbce52e08f317f2fcf 484 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_0502 298bbdaf88c2b7fbce52e08f317f2fcf 484 PRINTS PR00987 Glutamyl-tRNA synthetase signature 209 217 1.9E-28 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Theam_0502 298bbdaf88c2b7fbce52e08f317f2fcf 484 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.9E-28 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Theam_0502 298bbdaf88c2b7fbce52e08f317f2fcf 484 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.9E-28 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Theam_0502 298bbdaf88c2b7fbce52e08f317f2fcf 484 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.9E-28 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Theam_0502 298bbdaf88c2b7fbce52e08f317f2fcf 484 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 203 1.9E-28 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Theam_0502 298bbdaf88c2b7fbce52e08f317f2fcf 484 Gene3D G3DSA:3.40.50.620 1 329 6.3E-156 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_0502 298bbdaf88c2b7fbce52e08f317f2fcf 484 SUPERFAMILY SSF52374 3 313 2.28E-122 T 13-10-2018 Theam_0502 298bbdaf88c2b7fbce52e08f317f2fcf 484 Gene3D G3DSA:1.10.8.70 330 378 2.1E-9 T 13-10-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 Theam_0502 298bbdaf88c2b7fbce52e08f317f2fcf 484 Gene3D G3DSA:1.10.10.350 384 484 2.1E-24 T 13-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Theam_0858 2779135e6989cc79436d7aea4e044d92 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 5 18 4.0E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Theam_0858 2779135e6989cc79436d7aea4e044d92 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 49 4.0E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Theam_0858 2779135e6989cc79436d7aea4e044d92 200 SUPERFAMILY SSF46689 2 68 5.34E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Theam_0858 2779135e6989cc79436d7aea4e044d92 200 Gene3D G3DSA:1.10.10.60 1 47 3.4E-17 T 13-10-2018 Theam_0858 2779135e6989cc79436d7aea4e044d92 200 Gene3D G3DSA:1.10.357.10 48 186 2.0E-25 T 13-10-2018 Theam_0858 2779135e6989cc79436d7aea4e044d92 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 5 51 6.6E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Theam_0858 2779135e6989cc79436d7aea4e044d92 200 SUPERFAMILY SSF48498 71 186 1.13E-12 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 Gene3D G3DSA:1.10.1790.20 1236 1414 1.5E-68 T 13-10-2018 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 Gene3D G3DSA:2.40.50.100 1069 1144 3.0E-25 T 13-10-2018 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 Gene3D G3DSA:1.10.150.390 1416 1473 1.3E-28 T 13-10-2018 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 Pfam PF04998 RNA polymerase Rpb1, domain 5 887 1416 4.7E-71 T 13-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 258 1151 0.0 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 471 2.0E-85 T 13-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 Gene3D G3DSA:1.10.274.100 619 688 5.1E-27 T 13-10-2018 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 Gene3D G3DSA:2.40.50.100 1145 1227 1.3E-16 T 13-10-2018 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 Pfam PF05000 RNA polymerase Rpb1, domain 4 796 884 2.3E-16 T 13-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 SMART SM00663 364 643 7.3E-179 T 13-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 SUPERFAMILY SSF64484 16 1467 0.0 T 13-10-2018 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 Pfam PF00623 RNA polymerase Rpb1, domain 2 473 614 1.4E-34 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 Gene3D G3DSA:2.40.50.100 1252 1315 1.5E-68 T 13-10-2018 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 Pfam PF04983 RNA polymerase Rpb1, domain 3 618 765 1.3E-25 T 13-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1483 18.8 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 Gene3D G3DSA:1.10.40.90 503 545 1.2E-22 T 13-10-2018 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 Gene3D G3DSA:1.10.132.30 763 911 1.6E-63 T 13-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1578 b85e6e17a44a8c0cdb3c5489fa4c34ce 1490 Gene3D G3DSA:1.10.274.100 689 762 5.8E-15 T 13-10-2018 Theam_1782 5bdea1ebf2e4683bb7109aad5dd48383 392 Gene3D G3DSA:1.10.3210.10 63 262 7.9E-9 T 13-10-2018 Theam_1782 5bdea1ebf2e4683bb7109aad5dd48383 392 Pfam PF01966 HD domain 86 212 4.8E-12 T 13-10-2018 IPR006674 HD domain Theam_1782 5bdea1ebf2e4683bb7109aad5dd48383 392 SUPERFAMILY SSF109604 60 175 2.13E-11 T 13-10-2018 Theam_1782 5bdea1ebf2e4683bb7109aad5dd48383 392 SMART SM00471 81 223 2.3E-5 T 13-10-2018 IPR003607 HD/PDEase domain Theam_1422 71219872411407858f9067315ca8448b 187 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 4 184 19.273 T 13-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid Theam_1422 71219872411407858f9067315ca8448b 187 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 5 104 6.8E-17 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Theam_1422 71219872411407858f9067315ca8448b 187 Gene3D G3DSA:3.30.505.50 138 183 4.2E-15 T 13-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily Theam_1422 71219872411407858f9067315ca8448b 187 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 126 180 1.8E-16 T 13-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal Theam_1422 71219872411407858f9067315ca8448b 187 SUPERFAMILY SSF69754 5 117 1.22E-20 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like Theam_1422 71219872411407858f9067315ca8448b 187 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 7 101 7.9E-19 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Theam_1422 71219872411407858f9067315ca8448b 187 Gene3D G3DSA:3.30.160.100 4 116 1.9E-19 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like Theam_1253 bd678ac1bb80c85a16b4a86abd6e2007 384 SMART SM00387 271 383 8.1E-40 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_1253 bd678ac1bb80c85a16b4a86abd6e2007 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 380 1.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1253 bd678ac1bb80c85a16b4a86abd6e2007 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 361 1.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1253 bd678ac1bb80c85a16b4a86abd6e2007 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 322 1.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1253 bd678ac1bb80c85a16b4a86abd6e2007 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 336 1.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1253 bd678ac1bb80c85a16b4a86abd6e2007 384 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 272 381 1.4E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_1253 bd678ac1bb80c85a16b4a86abd6e2007 384 Gene3D G3DSA:1.10.287.130 159 226 7.9E-19 T 13-10-2018 Theam_1253 bd678ac1bb80c85a16b4a86abd6e2007 384 SUPERFAMILY SSF55874 215 381 4.45E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_1253 bd678ac1bb80c85a16b4a86abd6e2007 384 Gene3D G3DSA:3.30.565.10 231 383 1.7E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_1253 bd678ac1bb80c85a16b4a86abd6e2007 384 SMART SM00388 160 226 1.4E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Theam_1253 bd678ac1bb80c85a16b4a86abd6e2007 384 Gene3D G3DSA:3.30.450.20 47 158 2.4E-7 T 13-10-2018 Theam_1253 bd678ac1bb80c85a16b4a86abd6e2007 384 SUPERFAMILY SSF47384 148 226 9.22E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Theam_1253 bd678ac1bb80c85a16b4a86abd6e2007 384 SUPERFAMILY SSF55785 37 112 2.28E-6 T 13-10-2018 IPR035965 PAS domain superfamily Theam_1253 bd678ac1bb80c85a16b4a86abd6e2007 384 Pfam PF00512 His Kinase A (phospho-acceptor) domain 161 225 2.9E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Theam_1612 f327a30b2b014360f08d76b6c5f15e0e 416 Gene3D G3DSA:3.40.605.10 17 410 2.3E-169 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Theam_1612 f327a30b2b014360f08d76b6c5f15e0e 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 402 6.6E-155 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Theam_1612 f327a30b2b014360f08d76b6c5f15e0e 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 13-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Theam_1612 f327a30b2b014360f08d76b6c5f15e0e 416 PIRSF PIRSF000151 1 416 2.6E-186 T 13-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Theam_1612 f327a30b2b014360f08d76b6c5f15e0e 416 SUPERFAMILY SSF53720 4 415 1.57E-119 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Theam_1612 f327a30b2b014360f08d76b6c5f15e0e 416 Gene3D G3DSA:3.40.309.10 224 373 2.3E-169 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Theam_1612 f327a30b2b014360f08d76b6c5f15e0e 416 Pfam PF00171 Aldehyde dehydrogenase family 316 378 1.9E-5 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Theam_1612 f327a30b2b014360f08d76b6c5f15e0e 416 Pfam PF00171 Aldehyde dehydrogenase family 4 286 1.9E-18 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Theam_1612 f327a30b2b014360f08d76b6c5f15e0e 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 415 42.655 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Theam_0410 f847d364dbe9e1262276230712641b73 193 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 159 1.3E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Theam_0410 f847d364dbe9e1262276230712641b73 193 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 171 1.3E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Theam_0410 f847d364dbe9e1262276230712641b73 193 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 129 143 1.3E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Theam_0410 f847d364dbe9e1262276230712641b73 193 Gene3D G3DSA:3.40.50.2300 5 119 9.9E-8 T 13-10-2018 Theam_0410 f847d364dbe9e1262276230712641b73 193 SUPERFAMILY SSF46894 124 184 1.67E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Theam_0410 f847d364dbe9e1262276230712641b73 193 Pfam PF00196 Bacterial regulatory proteins, luxR family 127 182 2.4E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Theam_0410 f847d364dbe9e1262276230712641b73 193 SMART SM00421 126 183 2.6E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Theam_0410 f847d364dbe9e1262276230712641b73 193 Gene3D G3DSA:1.10.10.10 120 186 1.9E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0304 5e6cbc003c4354ed36c42b2206bed36f 175 Pfam PF02675 S-adenosylmethionine decarboxylase 57 148 2.2E-16 T 13-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Theam_0304 5e6cbc003c4354ed36c42b2206bed36f 175 Gene3D G3DSA:3.60.90.10 1 152 1.9E-18 T 13-10-2018 Theam_0304 5e6cbc003c4354ed36c42b2206bed36f 175 SUPERFAMILY SSF56276 77 148 7.45E-13 T 13-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 Theam_0248 654a0c67d7d25f95ffbeed8e9968e391 231 SUPERFAMILY SSF144091 9 223 2.49E-41 T 13-10-2018 Theam_0248 654a0c67d7d25f95ffbeed8e9968e391 231 Pfam PF01694 Rhomboid family 70 221 3.8E-37 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Theam_0248 654a0c67d7d25f95ffbeed8e9968e391 231 Gene3D G3DSA:1.20.1540.10 8 227 7.2E-30 T 13-10-2018 IPR035952 Rhomboid-like superfamily Theam_1463 eb191465efe41e3cb03080aa638fccac 321 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 184 317 4.1E-34 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Theam_1463 eb191465efe41e3cb03080aa638fccac 321 Pfam PF13144 Chaperone for flagella basal body P-ring formation 127 317 2.9E-33 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Theam_1463 eb191465efe41e3cb03080aa638fccac 321 Gene3D G3DSA:2.30.30.760 261 321 2.6E-8 T 13-10-2018 Theam_1463 eb191465efe41e3cb03080aa638fccac 321 SMART SM00858 196 257 9.5E-10 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Theam_1463 eb191465efe41e3cb03080aa638fccac 321 Gene3D G3DSA:3.90.1210.10 194 260 2.0E-7 T 13-10-2018 Theam_1463 eb191465efe41e3cb03080aa638fccac 321 SUPERFAMILY SSF51269 197 257 2.2E-5 T 13-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 Theam_0252 9ed6d29966056684dcba37d4728cc229 126 Pfam PF00164 Ribosomal protein S12/S23 12 123 4.8E-43 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0252 9ed6d29966056684dcba37d4728cc229 126 Gene3D G3DSA:2.40.50.140 1 126 3.2E-66 T 13-10-2018 Theam_0252 9ed6d29966056684dcba37d4728cc229 126 SUPERFAMILY SSF50249 2 124 2.14E-54 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0252 9ed6d29966056684dcba37d4728cc229 126 PIRSF PIRSF002133 1 124 6.2E-57 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0252 9ed6d29966056684dcba37d4728cc229 126 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 1.9E-69 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0252 9ed6d29966056684dcba37d4728cc229 126 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.4E-58 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0252 9ed6d29966056684dcba37d4728cc229 126 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.4E-58 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0252 9ed6d29966056684dcba37d4728cc229 126 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.4E-58 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0252 9ed6d29966056684dcba37d4728cc229 126 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.4E-58 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0252 9ed6d29966056684dcba37d4728cc229 126 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.4E-58 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0252 9ed6d29966056684dcba37d4728cc229 126 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.4E-58 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0252 9ed6d29966056684dcba37d4728cc229 126 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 41.566 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0252 9ed6d29966056684dcba37d4728cc229 126 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_1517 b5d2e988e858fee41090964a78bfca27 352 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 6 350 41.82 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Theam_1517 b5d2e988e858fee41090964a78bfca27 352 Pfam PF01008 Initiation factor 2 subunit family 49 339 1.5E-84 T 13-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 Theam_1517 b5d2e988e858fee41090964a78bfca27 352 Gene3D G3DSA:1.20.120.420 3 149 1.8E-47 T 13-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Theam_1517 b5d2e988e858fee41090964a78bfca27 352 SUPERFAMILY SSF100950 6 341 1.84E-119 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Theam_1517 b5d2e988e858fee41090964a78bfca27 352 Gene3D G3DSA:3.40.50.10470 151 351 2.5E-67 T 13-10-2018 Theam_1517 b5d2e988e858fee41090964a78bfca27 352 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 9 339 2.1E-137 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Theam_1517 b5d2e988e858fee41090964a78bfca27 352 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 34 339 3.5E-122 T 13-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 Pfam PF01624 MutS domain I 6 118 1.6E-44 T 13-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 Pfam PF05188 MutS domain II 124 227 2.9E-7 T 13-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 SUPERFAMILY SSF53150 117 259 6.15E-25 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 Gene3D G3DSA:3.40.1170.10 1 120 3.7E-48 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 Gene3D G3DSA:1.10.1420.10 366 516 6.1E-103 T 13-10-2018 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 Gene3D G3DSA:3.40.50.300 550 858 4.0E-108 T 13-10-2018 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 6 847 1.5E-291 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 SUPERFAMILY SSF55271 3 114 4.05E-42 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 SMART SM00534 588 775 6.5E-123 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 Pfam PF05192 MutS domain III 250 540 4.2E-39 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 SUPERFAMILY SSF48334 247 547 5.1E-91 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 SUPERFAMILY SSF52540 548 779 5.99E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 Gene3D G3DSA:3.30.420.110 122 240 1.8E-9 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 Pfam PF05190 MutS family domain IV 409 500 1.7E-31 T 13-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 PIRSF PIRSF037677 211 833 3.4E-133 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 PIRSF PIRSF037677 1 240 2.0E-32 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 5 842 24.276 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 Gene3D G3DSA:1.10.1420.10 246 541 6.1E-103 T 13-10-2018 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 Pfam PF00488 MutS domain V 592 778 1.1E-87 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 669 685 - T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Theam_0371 d2ec9f8a6cc5768d5307a3f3ca721feb 860 SMART SM00533 264 572 1.1E-109 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Theam_1493 391d6bb04f34f04894b92cbad40c6f54 192 SUPERFAMILY SSF54862 44 120 5.93E-19 T 13-10-2018 Theam_1493 391d6bb04f34f04894b92cbad40c6f54 192 Gene3D G3DSA:3.30.70.3270 35 192 1.2E-18 T 13-10-2018 Theam_1493 391d6bb04f34f04894b92cbad40c6f54 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_1493 391d6bb04f34f04894b92cbad40c6f54 192 Pfam PF12838 4Fe-4S dicluster domain 55 103 8.7E-11 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_1010 9621348078077d1f570680b3f157e0b5 257 Pfam PF00005 ABC transporter 21 169 1.8E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_1010 9621348078077d1f570680b3f157e0b5 257 SMART SM00382 29 226 8.2E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1010 9621348078077d1f570680b3f157e0b5 257 SUPERFAMILY SSF52540 5 234 2.6E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1010 9621348078077d1f570680b3f157e0b5 257 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Theam_1010 9621348078077d1f570680b3f157e0b5 257 Gene3D G3DSA:3.40.50.300 3 255 1.6E-66 T 13-10-2018 Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 716 794 1.2E-21 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 539 557 1.9E-41 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 584 602 1.9E-41 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 613 631 1.9E-41 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 660 1.9E-41 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 SUPERFAMILY SSF81923 3 150 1.47E-22 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 SUPERFAMILY SSF52540 483 802 2.54E-79 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 316 1.0E-13 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 Gene3D G3DSA:3.40.50.300 149 340 5.4E-74 T 13-10-2018 Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 Gene3D G3DSA:3.40.50.300 464 715 8.5E-99 T 13-10-2018 Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 569 587 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 Gene3D G3DSA:1.10.8.60 716 812 3.2E-22 T 13-10-2018 Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 Gene3D G3DSA:1.10.8.60 341 431 3.8E-29 T 13-10-2018 Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 292 304 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 Gene3D G3DSA:1.10.1780.10 1 148 3.0E-35 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 64 3.4E-7 T 13-10-2018 IPR004176 Clp, N-terminal Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 91 142 1.5E-9 T 13-10-2018 IPR004176 Clp, N-terminal Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 Pfam PF07724 AAA domain (Cdc48 subfamily) 534 708 2.3E-55 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 SMART SM01086 716 806 1.6E-24 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 SMART SM00382 535 685 1.5E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 SMART SM00382 197 341 1.0E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0362 644fe3ac9029a255f471a9f0b33757d9 824 SUPERFAMILY SSF52540 157 452 1.51E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0728 c276eb1f1239349d468cab5d5beddc0e 333 Gene3D G3DSA:3.20.20.370 7 232 3.2E-55 T 13-10-2018 Theam_0728 c276eb1f1239349d468cab5d5beddc0e 333 Pfam PF01522 Polysaccharide deacetylase 65 196 9.1E-24 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Theam_0728 c276eb1f1239349d468cab5d5beddc0e 333 SUPERFAMILY SSF88713 25 202 4.93E-36 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Theam_0717 6d37b58f48a83da8931491b48c9cc14b 276 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 39 275 5.9E-49 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0717 6d37b58f48a83da8931491b48c9cc14b 276 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 276 55.641 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0717 6d37b58f48a83da8931491b48c9cc14b 276 Gene3D G3DSA:3.90.78.10 195 276 2.9E-24 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0717 6d37b58f48a83da8931491b48c9cc14b 276 Gene3D G3DSA:3.30.465.10 67 194 3.2E-28 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Theam_0717 6d37b58f48a83da8931491b48c9cc14b 276 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 179 276 3.2E-21 T 13-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0717 6d37b58f48a83da8931491b48c9cc14b 276 SUPERFAMILY SSF56194 178 276 4.71E-26 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0717 6d37b58f48a83da8931491b48c9cc14b 276 Pfam PF01565 FAD binding domain 38 142 6.1E-14 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Theam_0717 6d37b58f48a83da8931491b48c9cc14b 276 SUPERFAMILY SSF56176 19 187 1.08E-28 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Theam_1082 4ff5cea8985fc5b017bb87a05d41d352 284 SMART SM00257 22 65 2.4E-16 T 13-10-2018 IPR018392 LysM domain Theam_1082 4ff5cea8985fc5b017bb87a05d41d352 284 SUPERFAMILY SSF54001 148 271 4.66E-42 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Theam_1082 4ff5cea8985fc5b017bb87a05d41d352 284 Gene3D G3DSA:3.10.350.10 18 71 1.5E-17 T 13-10-2018 IPR036779 LysM domain superfamily Theam_1082 4ff5cea8985fc5b017bb87a05d41d352 284 Gene3D G3DSA:3.90.1720.10 143 272 2.3E-41 T 13-10-2018 Theam_1082 4ff5cea8985fc5b017bb87a05d41d352 284 Pfam PF01476 LysM domain 23 65 3.1E-15 T 13-10-2018 IPR018392 LysM domain Theam_1082 4ff5cea8985fc5b017bb87a05d41d352 284 SUPERFAMILY SSF54106 21 65 3.53E-13 T 13-10-2018 Theam_1082 4ff5cea8985fc5b017bb87a05d41d352 284 Pfam PF00877 NlpC/P60 family 163 268 2.0E-29 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Theam_1810 aaa35eb12dd4a066ab67eb7c246012d7 102 Gene3D G3DSA:1.10.10.10 2 102 1.7E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_1810 aaa35eb12dd4a066ab67eb7c246012d7 102 Pfam PF01022 Bacterial regulatory protein, arsR family 24 70 1.3E-9 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1810 aaa35eb12dd4a066ab67eb7c246012d7 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 6.0E-9 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1810 aaa35eb12dd4a066ab67eb7c246012d7 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 6.0E-9 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1810 aaa35eb12dd4a066ab67eb7c246012d7 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 19 34 6.0E-9 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1810 aaa35eb12dd4a066ab67eb7c246012d7 102 SMART SM00418 17 98 3.3E-16 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1810 aaa35eb12dd4a066ab67eb7c246012d7 102 SUPERFAMILY SSF46785 11 90 1.51E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0489 23f4bb86ea20a6333ecf2f98fc6571d5 477 Gene3D G3DSA:3.40.605.10 27 461 7.6E-153 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Theam_0489 23f4bb86ea20a6333ecf2f98fc6571d5 477 Gene3D G3DSA:3.40.309.10 251 442 7.6E-153 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Theam_0489 23f4bb86ea20a6333ecf2f98fc6571d5 477 Pfam PF00171 Aldehyde dehydrogenase family 23 472 2.2E-155 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Theam_0489 23f4bb86ea20a6333ecf2f98fc6571d5 477 SUPERFAMILY SSF53720 5 475 2.36E-148 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Theam_1831 b0ba65b4df467e758c362ea672284d7d 121 Hamap MF_00984 Single-stranded DNA-binding protein. 1 101 22.098 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Theam_1831 b0ba65b4df467e758c362ea672284d7d 121 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 8 107 8.6E-23 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Theam_1831 b0ba65b4df467e758c362ea672284d7d 121 Pfam PF00436 Single-strand binding protein family 8 97 2.1E-20 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Theam_1831 b0ba65b4df467e758c362ea672284d7d 121 SUPERFAMILY SSF50249 5 107 4.11E-23 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_1831 b0ba65b4df467e758c362ea672284d7d 121 Gene3D G3DSA:2.40.50.140 3 113 7.5E-25 T 13-10-2018 Theam_1831 b0ba65b4df467e758c362ea672284d7d 121 PIRSF PIRSF002070 1 120 1.5E-24 T 13-10-2018 Theam_0887 9e10f5d1c70880ff31f0afaf7d04a91e 328 Pfam PF00814 Glycoprotease family 25 301 1.1E-91 T 13-10-2018 IPR000905 Gcp-like domain Theam_0887 9e10f5d1c70880ff31f0afaf7d04a91e 328 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 9.8E-43 T 13-10-2018 IPR017861 Kae1/TsaD family Theam_0887 9e10f5d1c70880ff31f0afaf7d04a91e 328 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 9.8E-43 T 13-10-2018 IPR017861 Kae1/TsaD family Theam_0887 9e10f5d1c70880ff31f0afaf7d04a91e 328 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 77 97 9.8E-43 T 13-10-2018 IPR017861 Kae1/TsaD family Theam_0887 9e10f5d1c70880ff31f0afaf7d04a91e 328 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 257 266 9.8E-43 T 13-10-2018 IPR017861 Kae1/TsaD family Theam_0887 9e10f5d1c70880ff31f0afaf7d04a91e 328 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 9.8E-43 T 13-10-2018 IPR017861 Kae1/TsaD family Theam_0887 9e10f5d1c70880ff31f0afaf7d04a91e 328 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 98 117 9.8E-43 T 13-10-2018 IPR017861 Kae1/TsaD family Theam_0887 9e10f5d1c70880ff31f0afaf7d04a91e 328 SUPERFAMILY SSF53067 1 299 2.75E-38 T 13-10-2018 Theam_0887 9e10f5d1c70880ff31f0afaf7d04a91e 328 Gene3D G3DSA:3.30.420.40 3 307 1.7E-111 T 13-10-2018 Theam_0887 9e10f5d1c70880ff31f0afaf7d04a91e 328 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 307 6.3E-116 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Theam_0887 9e10f5d1c70880ff31f0afaf7d04a91e 328 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 300 7.2E-102 T 13-10-2018 IPR017861 Kae1/TsaD family Theam_0887 9e10f5d1c70880ff31f0afaf7d04a91e 328 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 325 59.078 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Theam_0887 9e10f5d1c70880ff31f0afaf7d04a91e 328 Gene3D G3DSA:3.30.420.40 129 287 1.7E-111 T 13-10-2018 Theam_0853 2cd35895862f1cf5f6f5a69c5ea4e664 432 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 25 425 5.8E-111 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0853 2cd35895862f1cf5f6f5a69c5ea4e664 432 SUPERFAMILY SSF63418 4 94 4.97E-18 T 13-10-2018 IPR035911 MurE/MurF, N-terminal Theam_0853 2cd35895862f1cf5f6f5a69c5ea4e664 432 Gene3D G3DSA:3.90.190.20 296 431 1.1E-36 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Theam_0853 2cd35895862f1cf5f6f5a69c5ea4e664 432 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 428 27.781 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0853 2cd35895862f1cf5f6f5a69c5ea4e664 432 Pfam PF08245 Mur ligase middle domain 102 274 7.2E-24 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Theam_0853 2cd35895862f1cf5f6f5a69c5ea4e664 432 Gene3D G3DSA:3.40.1190.10 78 293 4.9E-48 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Theam_0853 2cd35895862f1cf5f6f5a69c5ea4e664 432 Pfam PF02875 Mur ligase family, glutamate ligase domain 297 375 1.1E-12 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Theam_0853 2cd35895862f1cf5f6f5a69c5ea4e664 432 Gene3D G3DSA:3.40.1390.10 1 72 3.1E-18 T 13-10-2018 Theam_0853 2cd35895862f1cf5f6f5a69c5ea4e664 432 SUPERFAMILY SSF53623 98 295 2.22E-33 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Theam_0853 2cd35895862f1cf5f6f5a69c5ea4e664 432 SUPERFAMILY SSF53244 297 426 7.51E-33 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Theam_0198 df0c2050313cca4dc60475dba2181686 303 SUPERFAMILY SSF46785 1 86 1.9E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0198 df0c2050313cca4dc60475dba2181686 303 Pfam PF03466 LysR substrate binding domain 90 295 4.8E-37 T 13-10-2018 IPR005119 LysR, substrate-binding Theam_0198 df0c2050313cca4dc60475dba2181686 303 Gene3D G3DSA:1.10.10.10 1 90 1.3E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0198 df0c2050313cca4dc60475dba2181686 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.3E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Theam_0198 df0c2050313cca4dc60475dba2181686 303 Gene3D G3DSA:3.40.190.290 92 298 5.3E-29 T 13-10-2018 Theam_0198 df0c2050313cca4dc60475dba2181686 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Theam_0198 df0c2050313cca4dc60475dba2181686 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Theam_0198 df0c2050313cca4dc60475dba2181686 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Theam_0198 df0c2050313cca4dc60475dba2181686 303 SUPERFAMILY SSF53850 90 297 1.9E-32 T 13-10-2018 Theam_1180 1c1a1c983bc545683d971454a572cac3 117 Pfam PF00453 Ribosomal protein L20 7 106 4.3E-43 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1180 1c1a1c983bc545683d971454a572cac3 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 52 68 - T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1180 1c1a1c983bc545683d971454a572cac3 117 SUPERFAMILY SSF74731 3 115 3.4E-45 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1180 1c1a1c983bc545683d971454a572cac3 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 2 112 1.6E-44 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1180 1c1a1c983bc545683d971454a572cac3 117 Gene3D G3DSA:1.10.720.90 2 53 3.1E-15 T 13-10-2018 Theam_1180 1c1a1c983bc545683d971454a572cac3 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 68 5.0E-8 T 13-10-2018 Theam_1180 1c1a1c983bc545683d971454a572cac3 117 PRINTS PR00062 Ribosomal protein L20 signature 40 69 1.9E-40 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1180 1c1a1c983bc545683d971454a572cac3 117 PRINTS PR00062 Ribosomal protein L20 signature 10 39 1.9E-40 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1180 1c1a1c983bc545683d971454a572cac3 117 PRINTS PR00062 Ribosomal protein L20 signature 73 99 1.9E-40 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1180 1c1a1c983bc545683d971454a572cac3 117 Gene3D G3DSA:1.10.1900.20 54 117 8.8E-33 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1180 1c1a1c983bc545683d971454a572cac3 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 1 113 28.355 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1582 c3462fa63b57de57acf8dd055a70508c 240 SUPERFAMILY SSF56808 6 228 6.67E-83 T 13-10-2018 IPR023674 Ribosomal protein L1-like Theam_1582 c3462fa63b57de57acf8dd055a70508c 240 Gene3D G3DSA:3.40.50.790 71 162 1.3E-88 T 13-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Theam_1582 c3462fa63b57de57acf8dd055a70508c 240 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 232 43.178 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Theam_1582 c3462fa63b57de57acf8dd055a70508c 240 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 229 1.6E-101 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Theam_1582 c3462fa63b57de57acf8dd055a70508c 240 Pfam PF00687 Ribosomal protein L1p/L10e family 37 221 4.6E-55 T 13-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Theam_1582 c3462fa63b57de57acf8dd055a70508c 240 Gene3D G3DSA:3.30.190.20 21 228 1.3E-88 T 13-10-2018 Theam_1582 c3462fa63b57de57acf8dd055a70508c 240 ProSitePatterns PS01199 Ribosomal protein L1 signature. 124 142 - T 13-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_1582 c3462fa63b57de57acf8dd055a70508c 240 PIRSF PIRSF002155 1 229 2.0E-81 T 13-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0123 5c6cd74ee554342e8774905d7a360961 500 Pfam PF10150 Ribonuclease E/G family 134 403 1.3E-105 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Theam_0123 5c6cd74ee554342e8774905d7a360961 500 Gene3D G3DSA:2.40.50.140 40 138 9.7E-31 T 13-10-2018 Theam_0123 5c6cd74ee554342e8774905d7a360961 500 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 22 436 5.9E-161 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Theam_0123 5c6cd74ee554342e8774905d7a360961 500 SMART SM00316 46 132 3.4E-7 T 13-10-2018 IPR022967 RNA-binding domain, S1 Theam_0123 5c6cd74ee554342e8774905d7a360961 500 Gene3D G3DSA:3.40.1260.20 412 499 2.8E-7 T 13-10-2018 Theam_0123 5c6cd74ee554342e8774905d7a360961 500 SUPERFAMILY SSF50249 48 137 3.97E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0997 a8cc85ea44719533c7073d94a374b30a 547 SUPERFAMILY SSF54631 429 541 3.41E-23 T 13-10-2018 Theam_0997 a8cc85ea44719533c7073d94a374b30a 547 Pfam PF00571 CBS domain 429 478 1.9E-6 T 13-10-2018 IPR000644 CBS domain Theam_0997 a8cc85ea44719533c7073d94a374b30a 547 Pfam PF00571 CBS domain 487 541 1.2E-7 T 13-10-2018 IPR000644 CBS domain Theam_0997 a8cc85ea44719533c7073d94a374b30a 547 PRINTS PR00762 Chloride channel signature 101 120 1.8E-14 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_0997 a8cc85ea44719533c7073d94a374b30a 547 PRINTS PR00762 Chloride channel signature 342 358 1.8E-14 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_0997 a8cc85ea44719533c7073d94a374b30a 547 PRINTS PR00762 Chloride channel signature 360 379 1.8E-14 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_0997 a8cc85ea44719533c7073d94a374b30a 547 PRINTS PR00762 Chloride channel signature 152 171 1.8E-14 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_0997 a8cc85ea44719533c7073d94a374b30a 547 Pfam PF00654 Voltage gated chloride channel 67 391 6.7E-52 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_0997 a8cc85ea44719533c7073d94a374b30a 547 Gene3D G3DSA:1.10.3080.10 2 407 5.4E-63 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Theam_0997 a8cc85ea44719533c7073d94a374b30a 547 SUPERFAMILY SSF81340 4 411 1.26E-67 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Theam_0997 a8cc85ea44719533c7073d94a374b30a 547 SMART SM00116 429 479 0.0025 T 13-10-2018 IPR000644 CBS domain Theam_0997 a8cc85ea44719533c7073d94a374b30a 547 SMART SM00116 494 542 8.5 T 13-10-2018 IPR000644 CBS domain Theam_0997 a8cc85ea44719533c7073d94a374b30a 547 Gene3D G3DSA:3.10.580.10 421 547 3.5E-21 T 13-10-2018 Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 SUPERFAMILY SSF51604 139 427 4.39E-126 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 424 7.3E-130 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 PRINTS PR00148 Enolase signature 37 51 8.8E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 PRINTS PR00148 Enolase signature 107 123 8.8E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 PRINTS PR00148 Enolase signature 312 323 8.8E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 PRINTS PR00148 Enolase signature 335 349 8.8E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 PRINTS PR00148 Enolase signature 161 174 8.8E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 PRINTS PR00148 Enolase signature 364 381 8.8E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 SMART SM01193 4 134 2.2E-99 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 ProSitePatterns PS00164 Enolase signature. 335 348 - T 13-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 Pfam PF03952 Enolase, N-terminal domain 4 134 1.6E-62 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 Gene3D G3DSA:3.20.20.120 128 429 1.6E-133 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 PIRSF PIRSF001400 1 426 1.9E-191 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 Gene3D G3DSA:3.30.390.10 1 126 1.2E-59 T 13-10-2018 IPR029017 Enolase-like, N-terminal Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 SMART SM01192 139 426 1.3E-215 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 SUPERFAMILY SSF54826 3 138 2.83E-58 T 13-10-2018 Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 Hamap MF_00318 Enolase [eno]. 2 412 45.046 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0586 c2b31887d081eeefa881c6e1625e8c80 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 426 1.5E-212 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0780 2bc1fed36592cdca7df7c96ac6fdb37a 310 Pfam PF01292 Prokaryotic cytochrome b561 33 221 5.6E-8 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Theam_0780 2bc1fed36592cdca7df7c96ac6fdb37a 310 Gene3D G3DSA:1.20.950.20 25 263 1.4E-34 T 13-10-2018 Theam_0780 2bc1fed36592cdca7df7c96ac6fdb37a 310 SUPERFAMILY SSF81342 29 255 1.88E-20 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Theam_0442 f58606b78d0f4a108213a01a62470526 560 SUPERFAMILY SSF102114 190 417 5.1E-18 T 13-10-2018 Theam_0442 f58606b78d0f4a108213a01a62470526 560 Pfam PF04055 Radical SAM superfamily 189 385 7.1E-17 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0442 f58606b78d0f4a108213a01a62470526 560 Gene3D G3DSA:3.80.30.20 186 437 2.4E-19 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Theam_0442 f58606b78d0f4a108213a01a62470526 560 SMART SM00729 185 434 4.4E-16 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_0442 f58606b78d0f4a108213a01a62470526 560 Gene3D G3DSA:1.10.150.320 497 548 5.2E-8 T 13-10-2018 Theam_0442 f58606b78d0f4a108213a01a62470526 560 Pfam PF12836 Helix-hairpin-helix motif 507 546 9.9E-8 T 13-10-2018 Theam_0442 f58606b78d0f4a108213a01a62470526 560 SUPERFAMILY SSF81585 497 560 1.31E-9 T 13-10-2018 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 PRINTS PR00681 Ribosomal protein S1 signature 100 116 4.2E-34 T 13-10-2018 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 PRINTS PR00681 Ribosomal protein S1 signature 76 95 4.2E-34 T 13-10-2018 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 PRINTS PR00681 Ribosomal protein S1 signature 18 36 4.2E-34 T 13-10-2018 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 PRINTS PR00681 Ribosomal protein S1 signature 316 334 4.2E-34 T 13-10-2018 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 PRINTS PR00681 Ribosomal protein S1 signature 36 50 4.2E-34 T 13-10-2018 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 PRINTS PR00681 Ribosomal protein S1 signature 205 226 4.2E-34 T 13-10-2018 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 PRINTS PR00681 Ribosomal protein S1 signature 148 168 4.2E-34 T 13-10-2018 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 SUPERFAMILY SSF50249 253 330 3.93E-9 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 SUPERFAMILY SSF50249 84 168 1.19E-12 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 SMART SM00316 268 333 0.0023 T 13-10-2018 IPR022967 RNA-binding domain, S1 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 SMART SM00316 95 164 4.5E-7 T 13-10-2018 IPR022967 RNA-binding domain, S1 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 SMART SM00316 183 253 6.8E-24 T 13-10-2018 IPR022967 RNA-binding domain, S1 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 SMART SM00316 16 79 1.3E-8 T 13-10-2018 IPR022967 RNA-binding domain, S1 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 SUPERFAMILY SSF50249 177 277 1.12E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 Gene3D G3DSA:2.40.50.140 177 263 8.6E-27 T 13-10-2018 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 Gene3D G3DSA:2.40.50.140 90 176 9.5E-10 T 13-10-2018 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 Gene3D G3DSA:2.40.50.140 264 339 2.8E-6 T 13-10-2018 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 Pfam PF00575 S1 RNA binding domain 269 330 1.3E-8 T 13-10-2018 IPR003029 S1 domain GO:0003676 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 Pfam PF00575 S1 RNA binding domain 182 253 5.1E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 Pfam PF00575 S1 RNA binding domain 99 164 2.7E-7 T 13-10-2018 IPR003029 S1 domain GO:0003676 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 Pfam PF00575 S1 RNA binding domain 19 78 2.2E-6 T 13-10-2018 IPR003029 S1 domain GO:0003676 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 Gene3D G3DSA:2.40.50.140 3 89 2.8E-16 T 13-10-2018 Theam_1691 ce00c5016fde93545ac4af327f2559e6 339 SUPERFAMILY SSF50249 5 104 1.42E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_1341 74019ea920b1137e059017e0cb8e3d55 233 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 16 219 1.2E-54 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein Theam_1341 74019ea920b1137e059017e0cb8e3d55 233 Pfam PF03749 Sugar fermentation stimulation protein 25 220 7.8E-57 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein Theam_1341 74019ea920b1137e059017e0cb8e3d55 233 Gene3D G3DSA:3.40.1350.60 78 233 1.2E-37 T 13-10-2018 Theam_1341 74019ea920b1137e059017e0cb8e3d55 233 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 14 233 41.243 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein Theam_1729 5a61a911d12dbb00e0ce95ad5392dda2 343 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 343 48.563 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Theam_1729 5a61a911d12dbb00e0ce95ad5392dda2 343 Gene3D G3DSA:3.40.1780.10 14 342 3.6E-130 T 13-10-2018 Theam_1729 5a61a911d12dbb00e0ce95ad5392dda2 343 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2 343 3.0E-137 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Theam_1729 5a61a911d12dbb00e0ce95ad5392dda2 343 Gene3D G3DSA:2.40.10.240 64 164 3.6E-130 T 13-10-2018 Theam_1729 5a61a911d12dbb00e0ce95ad5392dda2 343 Pfam PF02547 Queuosine biosynthesis protein 3 342 1.2E-144 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Theam_1729 5a61a911d12dbb00e0ce95ad5392dda2 343 SUPERFAMILY SSF111337 1 342 7.46E-141 T 13-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 280 293 2.3E-82 T 13-10-2018 Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 252 278 2.3E-82 T 13-10-2018 Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 112 135 2.3E-82 T 13-10-2018 Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 210 227 2.3E-82 T 13-10-2018 Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 155 179 2.3E-82 T 13-10-2018 Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 228 246 2.3E-82 T 13-10-2018 Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 45 67 2.3E-82 T 13-10-2018 Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 184 207 2.3E-82 T 13-10-2018 Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 68 92 2.3E-82 T 13-10-2018 Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 15 43 1.3E-6 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 14 354 8.3E-145 T 13-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 Gene3D G3DSA:3.40.50.700 45 221 1.7E-71 T 13-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 60 203 1.1E-35 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 Gene3D G3DSA:4.10.480.10 225 340 7.8E-40 T 13-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 SUPERFAMILY SSF56770 48 307 1.44E-89 T 13-10-2018 Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 PIRSF PIRSF000310 10 358 1.2E-143 T 13-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Theam_1121 a45c2684d0fb7ba74e31a102e860705f 360 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 223 305 3.8E-31 T 13-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal Theam_0313 6930cd973ae5d23ef7377d71189fbb10 382 SUPERFAMILY SSF56935 73 376 1.03E-5 T 13-10-2018 Theam_0313 6930cd973ae5d23ef7377d71189fbb10 382 Gene3D G3DSA:2.40.160.10 177 379 1.4E-5 T 13-10-2018 IPR023614 Porin domain superfamily Theam_0286 2379d0c4fd13a9721a450de4976c5ebe 135 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 117 23.798 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0286 2379d0c4fd13a9721a450de4976c5ebe 135 SUPERFAMILY SSF64263 1 118 3.4E-40 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0286 2379d0c4fd13a9721a450de4976c5ebe 135 Gene3D G3DSA:3.90.1030.10 1 117 7.9E-42 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0286 2379d0c4fd13a9721a450de4976c5ebe 135 Pfam PF01196 Ribosomal protein L17 20 117 1.4E-30 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0286 2379d0c4fd13a9721a450de4976c5ebe 135 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 118 1.0E-36 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0617 3bbcc58740e486ded62298e57adfdbf1 145 Pfam PF07977 FabA-like domain 12 136 1.2E-32 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Theam_0617 3bbcc58740e486ded62298e57adfdbf1 145 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 3 142 1.6E-56 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Theam_0617 3bbcc58740e486ded62298e57adfdbf1 145 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 3 144 34.056 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Theam_0617 3bbcc58740e486ded62298e57adfdbf1 145 Gene3D G3DSA:3.10.129.10 1 145 2.4E-59 T 13-10-2018 Theam_0617 3bbcc58740e486ded62298e57adfdbf1 145 SUPERFAMILY SSF54637 2 142 2.93E-48 T 13-10-2018 IPR029069 HotDog domain superfamily Theam_1244 97747c9be809b1ed8d0e087525ca6621 376 PIRSF PIRSF037420 2 371 1.2E-94 T 13-10-2018 IPR017200 Coenzyme PQQ synthesis protein E Theam_1244 97747c9be809b1ed8d0e087525ca6621 376 SMART SM00729 10 210 1.0E-4 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_1244 97747c9be809b1ed8d0e087525ca6621 376 SUPERFAMILY SSF102114 8 333 6.67E-71 T 13-10-2018 Theam_1244 97747c9be809b1ed8d0e087525ca6621 376 Gene3D G3DSA:3.20.20.70 9 337 9.1E-53 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1244 97747c9be809b1ed8d0e087525ca6621 376 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 266 352 1.3E-7 T 13-10-2018 IPR023885 4Fe4S-binding SPASM domain Theam_1244 97747c9be809b1ed8d0e087525ca6621 376 Pfam PF13353 4Fe-4S single cluster domain 17 100 2.0E-10 T 13-10-2018 Theam_1244 97747c9be809b1ed8d0e087525ca6621 376 Pfam PF04055 Radical SAM superfamily 15 151 4.1E-23 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0134 74a5f086660dc3d0fa130e80622f7293 262 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 13-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Theam_0134 74a5f086660dc3d0fa130e80622f7293 262 Gene3D G3DSA:3.40.50.1860 4 245 7.1E-93 T 13-10-2018 Theam_0134 74a5f086660dc3d0fa130e80622f7293 262 Gene3D G3DSA:3.40.50.1860 95 206 7.1E-93 T 13-10-2018 Theam_0134 74a5f086660dc3d0fa130e80622f7293 262 Hamap MF_00258 Glutamate racemase [murI]. 4 251 38.76 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Theam_0134 74a5f086660dc3d0fa130e80622f7293 262 SUPERFAMILY SSF53681 109 256 1.44E-41 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Theam_0134 74a5f086660dc3d0fa130e80622f7293 262 TIGRFAM TIGR00067 glut_race: glutamate racemase 6 225 4.6E-78 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Theam_0134 74a5f086660dc3d0fa130e80622f7293 262 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 213 8.5E-38 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Theam_0134 74a5f086660dc3d0fa130e80622f7293 262 SUPERFAMILY SSF53681 5 106 2.52E-38 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Theam_0134 74a5f086660dc3d0fa130e80622f7293 262 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 13-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Theam_1397 6b42f1cbac3d976a0244c869b0734d42 110 Gene3D G3DSA:3.30.1310.10 2 108 2.5E-31 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Theam_1397 6b42f1cbac3d976a0244c869b0734d42 110 PIRSF PIRSF004555 5 110 7.2E-32 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Theam_1397 6b42f1cbac3d976a0244c869b0734d42 110 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 7 101 19.523 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Theam_1397 6b42f1cbac3d976a0244c869b0734d42 110 SUPERFAMILY SSF82607 9 101 2.75E-26 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Theam_1397 6b42f1cbac3d976a0244c869b0734d42 110 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 97 6.2E-23 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Theam_1397 6b42f1cbac3d976a0244c869b0734d42 110 Pfam PF02575 YbaB/EbfC DNA-binding family 13 102 2.5E-27 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Theam_0222 b9341f29b9613ad8ec2e1f3ecf298913 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Theam_0222 b9341f29b9613ad8ec2e1f3ecf298913 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.3E-48 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Theam_0222 b9341f29b9613ad8ec2e1f3ecf298913 448 SUPERFAMILY SSF52440 1 113 7.91E-53 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Theam_0222 b9341f29b9613ad8ec2e1f3ecf298913 448 Pfam PF02785 Biotin carboxylase C-terminal domain 333 440 6.0E-37 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Theam_0222 b9341f29b9613ad8ec2e1f3ecf298913 448 SMART SM00878 333 440 2.3E-56 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Theam_0222 b9341f29b9613ad8ec2e1f3ecf298913 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Theam_0222 b9341f29b9613ad8ec2e1f3ecf298913 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 2.6E-77 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Theam_0222 b9341f29b9613ad8ec2e1f3ecf298913 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 442 3.5E-201 T 13-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Theam_0222 b9341f29b9613ad8ec2e1f3ecf298913 448 SUPERFAMILY SSF56059 83 329 9.02E-72 T 13-10-2018 Theam_0222 b9341f29b9613ad8ec2e1f3ecf298913 448 SUPERFAMILY SSF51246 328 441 4.87E-40 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Theam_0222 b9341f29b9613ad8ec2e1f3ecf298913 448 Gene3D G3DSA:3.30.470.130 1 445 2.5E-194 T 13-10-2018 Theam_1456 ef25f7add7bfa10555acd412f09b4e8b 203 Gene3D G3DSA:1.20.140.160 88 202 2.4E-25 T 13-10-2018 Theam_1456 ef25f7add7bfa10555acd412f09b4e8b 203 Gene3D G3DSA:1.10.1740.10 1 79 4.5E-27 T 13-10-2018 Theam_1456 ef25f7add7bfa10555acd412f09b4e8b 203 SUPERFAMILY SSF88659 115 201 1.55E-21 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Theam_1456 ef25f7add7bfa10555acd412f09b4e8b 203 SUPERFAMILY SSF88946 4 78 3.4E-22 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Theam_1456 ef25f7add7bfa10555acd412f09b4e8b 203 Pfam PF04545 Sigma-70, region 4 148 197 7.3E-17 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Theam_1456 ef25f7add7bfa10555acd412f09b4e8b 203 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 199 1.5E-38 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Theam_1456 ef25f7add7bfa10555acd412f09b4e8b 203 PRINTS PR00046 Major sigma-70 factor signature 60 68 2.8E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_1456 ef25f7add7bfa10555acd412f09b4e8b 203 PRINTS PR00046 Major sigma-70 factor signature 152 164 2.8E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_1456 ef25f7add7bfa10555acd412f09b4e8b 203 PRINTS PR00046 Major sigma-70 factor signature 37 50 2.8E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_1456 ef25f7add7bfa10555acd412f09b4e8b 203 PRINTS PR00046 Major sigma-70 factor signature 184 195 2.8E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_1456 ef25f7add7bfa10555acd412f09b4e8b 203 PRINTS PR00046 Major sigma-70 factor signature 169 184 2.8E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_1456 ef25f7add7bfa10555acd412f09b4e8b 203 Pfam PF04542 Sigma-70 region 2 9 79 1.2E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Theam_1132 76d0d9386bef9b176fddb526ee783385 54 PIRSF PIRSF000071 1 54 6.9E-27 T 13-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 Theam_1132 76d0d9386bef9b176fddb526ee783385 54 Pfam PF00301 Rubredoxin 3 49 2.0E-22 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 Theam_1132 76d0d9386bef9b176fddb526ee783385 54 SUPERFAMILY SSF57802 2 53 4.71E-23 T 13-10-2018 Theam_1132 76d0d9386bef9b176fddb526ee783385 54 Gene3D G3DSA:2.20.28.10 1 54 4.3E-27 T 13-10-2018 Theam_1132 76d0d9386bef9b176fddb526ee783385 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 13-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 Theam_1132 76d0d9386bef9b176fddb526ee783385 54 PRINTS PR00163 Rubredoxin signature 3 19 3.9E-11 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 Theam_1132 76d0d9386bef9b176fddb526ee783385 54 PRINTS PR00163 Rubredoxin signature 33 49 3.9E-11 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 Theam_1393 7ab42a07cc96ed5d2c2fcff6790860c0 402 Gene3D G3DSA:3.40.50.970 11 259 3.4E-96 T 13-10-2018 Theam_1393 7ab42a07cc96ed5d2c2fcff6790860c0 402 SUPERFAMILY SSF52518 11 258 1.18E-66 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Theam_1393 7ab42a07cc96ed5d2c2fcff6790860c0 402 Gene3D G3DSA:3.40.50.920 260 401 3.4E-42 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Theam_1393 7ab42a07cc96ed5d2c2fcff6790860c0 402 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 23 246 3.2E-76 T 13-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Theam_1393 7ab42a07cc96ed5d2c2fcff6790860c0 402 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 376 4.1E-27 T 13-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Theam_1393 7ab42a07cc96ed5d2c2fcff6790860c0 402 SUPERFAMILY SSF52922 261 387 6.02E-33 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Theam_1323 833074cb64934078ccefef2a44d186dd 311 PIRSF PIRSF000904 1 311 2.8E-115 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Theam_1323 833074cb64934078ccefef2a44d186dd 311 PIRSF PIRSF500210 1 311 3.1E-117 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Theam_1323 833074cb64934078ccefef2a44d186dd 311 SUPERFAMILY SSF56655 3 308 7.07E-104 T 13-10-2018 Theam_1323 833074cb64934078ccefef2a44d186dd 311 Gene3D G3DSA:3.40.190.80 182 310 4.9E-55 T 13-10-2018 Theam_1323 833074cb64934078ccefef2a44d186dd 311 Gene3D G3DSA:3.30.540.10 1 181 4.0E-65 T 13-10-2018 Theam_1323 833074cb64934078ccefef2a44d186dd 311 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 164 187 1.5E-58 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Theam_1323 833074cb64934078ccefef2a44d186dd 311 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 1.5E-58 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Theam_1323 833074cb64934078ccefef2a44d186dd 311 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 284 309 1.5E-58 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Theam_1323 833074cb64934078ccefef2a44d186dd 311 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 190 217 1.5E-58 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Theam_1323 833074cb64934078ccefef2a44d186dd 311 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 133 156 1.5E-58 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Theam_1323 833074cb64934078ccefef2a44d186dd 311 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 28 55 1.5E-58 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Theam_1323 833074cb64934078ccefef2a44d186dd 311 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 250 262 - T 13-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Theam_1323 833074cb64934078ccefef2a44d186dd 311 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 4 178 1.6E-59 T 13-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Theam_1323 833074cb64934078ccefef2a44d186dd 311 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 3 310 41.523 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Theam_0367 250d2ae6d97a6f1ece22363126b8e717 130 Gene3D G3DSA:1.20.120.330 7 126 3.0E-16 T 13-10-2018 Theam_0367 250d2ae6d97a6f1ece22363126b8e717 130 Pfam PF05168 HEPN domain 36 124 8.4E-9 T 13-10-2018 IPR007842 HEPN domain Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 Gene3D G3DSA:2.30.130.10 266 349 2.9E-19 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 PIRSF PIRSF000729 1 345 5.1E-126 T 13-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 2.7E-49 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 2.7E-49 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 2.7E-49 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 2.7E-49 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 2.7E-49 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 Hamap MF_00456 Glutamate 5-kinase [proB]. 6 259 37.259 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 SUPERFAMILY SSF88697 275 348 5.97E-15 T 13-10-2018 IPR015947 PUA-like superfamily Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 TIGRFAM TIGR01027 proB: glutamate 5-kinase 6 337 1.2E-123 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 Gene3D G3DSA:3.40.1160.10 1 264 5.9E-91 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 13-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 Pfam PF01472 PUA domain 276 336 8.2E-16 T 13-10-2018 IPR002478 PUA domain GO:0003723 Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 SMART SM00359 276 349 2.7E-9 T 13-10-2018 IPR002478 PUA domain GO:0003723 Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 SUPERFAMILY SSF53633 6 257 1.83E-69 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Theam_1312 826836cff8cacd186b95bff1135dcfc7 352 Pfam PF00696 Amino acid kinase family 6 234 5.3E-46 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Theam_0007 1c7310c114bb0ed2971ac3be202214d4 364 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 363 4.0E-82 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Theam_0007 1c7310c114bb0ed2971ac3be202214d4 364 SUPERFAMILY SSF55979 240 363 7.33E-24 T 13-10-2018 Theam_0007 1c7310c114bb0ed2971ac3be202214d4 364 SUPERFAMILY SSF55979 125 238 1.2E-22 T 13-10-2018 Theam_0007 1c7310c114bb0ed2971ac3be202214d4 364 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 117 6.0E-20 T 13-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Theam_0007 1c7310c114bb0ed2971ac3be202214d4 364 PIRSF PIRSF000804 1 364 1.4E-94 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Theam_0007 1c7310c114bb0ed2971ac3be202214d4 364 SMART SM00480 17 360 2.0E-91 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Theam_0007 1c7310c114bb0ed2971ac3be202214d4 364 Gene3D G3DSA:3.70.10.10 135 362 2.8E-102 T 13-10-2018 Theam_0007 1c7310c114bb0ed2971ac3be202214d4 364 Pfam PF02767 DNA polymerase III beta subunit, central domain 126 237 4.8E-27 T 13-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Theam_0007 1c7310c114bb0ed2971ac3be202214d4 364 Gene3D G3DSA:3.10.150.10 1 236 2.8E-102 T 13-10-2018 Theam_0007 1c7310c114bb0ed2971ac3be202214d4 364 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 240 363 6.3E-22 T 13-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Theam_0007 1c7310c114bb0ed2971ac3be202214d4 364 SUPERFAMILY SSF55979 1 117 6.28E-23 T 13-10-2018 Theam_0269 97be3a1a45fe5072eae82d080090ab87 185 Pfam PF00281 Ribosomal protein L5 30 86 9.6E-28 T 13-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0269 97be3a1a45fe5072eae82d080090ab87 185 SUPERFAMILY SSF55282 9 185 1.91E-80 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0269 97be3a1a45fe5072eae82d080090ab87 185 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 7 185 45.837 T 13-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0269 97be3a1a45fe5072eae82d080090ab87 185 Gene3D G3DSA:3.30.1440.10 6 185 7.1E-86 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0269 97be3a1a45fe5072eae82d080090ab87 185 PIRSF PIRSF002161 4 185 2.6E-70 T 13-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0269 97be3a1a45fe5072eae82d080090ab87 185 Pfam PF00673 ribosomal L5P family C-terminus 90 183 2.4E-42 T 13-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 Gene3D G3DSA:1.10.40.30 366 436 6.9E-157 T 13-10-2018 Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 SUPERFAMILY SSF48557 5 454 6.28E-157 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 6.0E-26 T 13-10-2018 IPR000362 Fumarate lyase family Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 6.0E-26 T 13-10-2018 IPR000362 Fumarate lyase family Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 6.0E-26 T 13-10-2018 IPR000362 Fumarate lyase family Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 6.0E-26 T 13-10-2018 IPR000362 Fumarate lyase family Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 Gene3D G3DSA:1.20.200.10 109 449 6.9E-157 T 13-10-2018 Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 Gene3D G3DSA:1.10.275.50 1 108 4.2E-44 T 13-10-2018 Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 Pfam PF00206 Lyase 8 302 1.4E-85 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 Pfam PF14698 Argininosuccinate lyase C-terminal 365 433 2.8E-25 T 13-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 455 45.667 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 TIGRFAM TIGR00838 argH: argininosuccinate lyase 5 456 2.8E-208 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 1.6E-66 T 13-10-2018 Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 PRINTS PR00145 Argininosuccinate lyase family signature 233 257 1.6E-66 T 13-10-2018 Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 1.6E-66 T 13-10-2018 Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 PRINTS PR00145 Argininosuccinate lyase family signature 312 331 1.6E-66 T 13-10-2018 Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 PRINTS PR00145 Argininosuccinate lyase family signature 195 211 1.6E-66 T 13-10-2018 Theam_0146 cb59335b42ec5663ae409fbead7d923c 459 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 1.6E-66 T 13-10-2018 Theam_0290 ccbf40abf0cf182caf3faac94c9b3eab 266 TIGRFAM TIGR01230 agmatinase: agmatinase 3 262 5.6E-84 T 13-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 Theam_0290 ccbf40abf0cf182caf3faac94c9b3eab 266 Pfam PF00491 Arginase family 11 262 4.5E-72 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 Theam_0290 ccbf40abf0cf182caf3faac94c9b3eab 266 Gene3D G3DSA:3.40.800.10 5 265 7.6E-85 T 13-10-2018 Theam_0290 ccbf40abf0cf182caf3faac94c9b3eab 266 SUPERFAMILY SSF52768 8 262 1.37E-75 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily Theam_0290 ccbf40abf0cf182caf3faac94c9b3eab 266 ProSitePatterns PS01053 Arginase family signature. 192 213 - T 13-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Theam_0290 ccbf40abf0cf182caf3faac94c9b3eab 266 PIRSF PIRSF036979 1 266 2.0E-87 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 Theam_0319 f9bbfc76052415d8a72bad8b26c68294 342 SUPERFAMILY SSF54862 196 278 1.05E-8 T 13-10-2018 Theam_0319 f9bbfc76052415d8a72bad8b26c68294 342 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 262 273 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0319 f9bbfc76052415d8a72bad8b26c68294 342 Pfam PF12801 4Fe-4S binding domain 67 112 4.4E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_0319 f9bbfc76052415d8a72bad8b26c68294 342 Pfam PF12801 4Fe-4S binding domain 186 225 2.2E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_0899 d7efb615ee47ac1c65b8834f57de82c1 348 Gene3D G3DSA:3.30.1490.300 91 147 8.3E-57 T 13-10-2018 Theam_0899 d7efb615ee47ac1c65b8834f57de82c1 348 SUPERFAMILY SSF53067 186 338 2.21E-20 T 13-10-2018 Theam_0899 d7efb615ee47ac1c65b8834f57de82c1 348 PIRSF PIRSF019169 14 341 1.9E-57 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM Theam_0899 d7efb615ee47ac1c65b8834f57de82c1 348 Gene3D G3DSA:3.30.420.40 18 339 8.3E-57 T 13-10-2018 Theam_0899 d7efb615ee47ac1c65b8834f57de82c1 348 Pfam PF11104 Type IV pilus assembly protein PilM; 18 321 9.8E-33 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM Theam_0899 d7efb615ee47ac1c65b8834f57de82c1 348 Gene3D G3DSA:3.30.420.40 186 315 8.3E-57 T 13-10-2018 Theam_0899 d7efb615ee47ac1c65b8834f57de82c1 348 SUPERFAMILY SSF53067 15 175 2.41E-11 T 13-10-2018 Theam_0365 6b3a588056175a1a9d54065b1f6052ab 183 Pfam PF01661 Macro domain 30 143 1.1E-37 T 13-10-2018 IPR002589 Macro domain Theam_0365 6b3a588056175a1a9d54065b1f6052ab 183 SMART SM00506 13 144 4.8E-50 T 13-10-2018 IPR002589 Macro domain Theam_0365 6b3a588056175a1a9d54065b1f6052ab 183 Gene3D G3DSA:3.40.220.10 2 183 5.1E-63 T 13-10-2018 Theam_0365 6b3a588056175a1a9d54065b1f6052ab 183 SUPERFAMILY SSF52949 5 182 4.88E-60 T 13-10-2018 Theam_1118 4ee5a0816aaed96029fad2803a215d90 246 Pfam PF13187 4Fe-4S dicluster domain 192 236 3.4E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_1118 4ee5a0816aaed96029fad2803a215d90 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 223 234 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_1118 4ee5a0816aaed96029fad2803a215d90 246 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 26 156 1.2E-25 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1118 4ee5a0816aaed96029fad2803a215d90 246 Gene3D G3DSA:3.30.70.20 176 242 1.6E-17 T 13-10-2018 Theam_1118 4ee5a0816aaed96029fad2803a215d90 246 Gene3D G3DSA:3.40.50.700 14 175 1.2E-45 T 13-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Theam_1118 4ee5a0816aaed96029fad2803a215d90 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 192 203 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_1118 4ee5a0816aaed96029fad2803a215d90 246 SUPERFAMILY SSF56770 15 237 3.14E-38 T 13-10-2018 Theam_1118 4ee5a0816aaed96029fad2803a215d90 246 TIGRFAM TIGR03294 FrhG: coenzyme F420 hydrogenase, subunit gamma 16 239 2.5E-76 T 13-10-2018 IPR017681 Coenzyme F420 hydrogenase, subunit gamma GO:0016151|GO:0050454|GO:0050660|GO:0051536|GO:0055114 KEGG: 00680+1.12.98.1|MetaCyc: PWY-5207 Theam_0920 f0e34f8dfa32cec2fc822940c55ec551 230 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 173 190 - T 13-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Theam_0920 f0e34f8dfa32cec2fc822940c55ec551 230 SUPERFAMILY SSF64005 3 223 7.46E-81 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Theam_0920 f0e34f8dfa32cec2fc822940c55ec551 230 Gene3D G3DSA:3.40.1180.10 1 230 5.8E-88 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Theam_0920 f0e34f8dfa32cec2fc822940c55ec551 230 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 6 227 1.5E-77 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Theam_0920 f0e34f8dfa32cec2fc822940c55ec551 230 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 6 228 39.304 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Theam_0920 f0e34f8dfa32cec2fc822940c55ec551 230 Pfam PF01255 Putative undecaprenyl diphosphate synthase 13 227 8.1E-76 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Theam_0240 c5e25fcf16919fca624317f2145d9c6b 364 Pfam PF02684 Lipid-A-disaccharide synthetase 5 341 1.6E-73 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Theam_0240 c5e25fcf16919fca624317f2145d9c6b 364 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 4 339 3.9E-63 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Theam_0240 c5e25fcf16919fca624317f2145d9c6b 364 SUPERFAMILY SSF53756 5 361 3.32E-25 T 13-10-2018 Theam_0973 f7ac7e8888e6cd1825ba6d9776e4382e 340 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Theam_0973 f7ac7e8888e6cd1825ba6d9776e4382e 340 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 338 5.8E-33 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Theam_0973 f7ac7e8888e6cd1825ba6d9776e4382e 340 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 307 3.1E-57 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Theam_0973 f7ac7e8888e6cd1825ba6d9776e4382e 340 SUPERFAMILY SSF52283 2 122 4.91E-31 T 13-10-2018 Theam_0973 f7ac7e8888e6cd1825ba6d9776e4382e 340 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Theam_0973 f7ac7e8888e6cd1825ba6d9776e4382e 340 Gene3D G3DSA:3.40.50.720 101 307 7.9E-114 T 13-10-2018 Theam_0973 f7ac7e8888e6cd1825ba6d9776e4382e 340 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 146 173 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Theam_0973 f7ac7e8888e6cd1825ba6d9776e4382e 340 Gene3D G3DSA:3.40.50.720 2 330 7.9E-114 T 13-10-2018 Theam_0973 f7ac7e8888e6cd1825ba6d9776e4382e 340 SUPERFAMILY SSF51735 103 307 1.62E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0929 82954399f6334ae0da75287148890d41 439 SUPERFAMILY SSF52172 3 178 1.1E-45 T 13-10-2018 IPR011006 CheY-like superfamily Theam_0929 82954399f6334ae0da75287148890d41 439 Gene3D G3DSA:1.10.8.60 304 369 7.7E-25 T 13-10-2018 Theam_0929 82954399f6334ae0da75287148890d41 439 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 219 234 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Theam_0929 82954399f6334ae0da75287148890d41 439 Pfam PF00158 Sigma-54 interaction domain 135 299 1.2E-68 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Theam_0929 82954399f6334ae0da75287148890d41 439 Gene3D G3DSA:3.40.50.2300 2 128 3.7E-40 T 13-10-2018 Theam_0929 82954399f6334ae0da75287148890d41 439 SMART SM00382 154 296 9.3E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0929 82954399f6334ae0da75287148890d41 439 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 2.0E-14 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Theam_0929 82954399f6334ae0da75287148890d41 439 Gene3D G3DSA:1.10.10.60 372 439 7.3E-17 T 13-10-2018 Theam_0929 82954399f6334ae0da75287148890d41 439 Gene3D G3DSA:3.40.50.300 129 303 5.0E-67 T 13-10-2018 Theam_0929 82954399f6334ae0da75287148890d41 439 SUPERFAMILY SSF46689 383 439 2.91E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Theam_0929 82954399f6334ae0da75287148890d41 439 SMART SM00448 4 115 5.2E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_0929 82954399f6334ae0da75287148890d41 439 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 158 171 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Theam_0929 82954399f6334ae0da75287148890d41 439 Pfam PF00072 Response regulator receiver domain 6 115 1.7E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_0929 82954399f6334ae0da75287148890d41 439 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 403 420 6.9E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Theam_0929 82954399f6334ae0da75287148890d41 439 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 439 6.9E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Theam_0929 82954399f6334ae0da75287148890d41 439 SUPERFAMILY SSF52540 134 367 1.49E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0929 82954399f6334ae0da75287148890d41 439 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 345 354 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Theam_1035 eb6faea814c2c9b3b9fd24e51be6f03b 391 SUPERFAMILY SSF102645 167 390 7.85E-74 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Theam_1035 eb6faea814c2c9b3b9fd24e51be6f03b 391 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 182 362 6.1E-72 T 13-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Theam_1035 eb6faea814c2c9b3b9fd24e51be6f03b 391 Gene3D G3DSA:3.40.50.10300 180 391 8.5E-77 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Theam_1035 eb6faea814c2c9b3b9fd24e51be6f03b 391 SUPERFAMILY SSF52507 3 176 3.53E-54 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Theam_1035 eb6faea814c2c9b3b9fd24e51be6f03b 391 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 384 5.0E-133 T 13-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Theam_1035 eb6faea814c2c9b3b9fd24e51be6f03b 391 Pfam PF02441 Flavoprotein 6 174 1.7E-43 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Theam_1035 eb6faea814c2c9b3b9fd24e51be6f03b 391 Gene3D G3DSA:3.40.50.1950 1 179 1.9E-55 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Theam_0896 29a1f6cb4b604ba8528d8e0327a96f04 638 Gene3D G3DSA:3.30.1370.120 193 269 2.2E-9 T 13-10-2018 IPR038591 NolW-like superfamily Theam_0896 29a1f6cb4b604ba8528d8e0327a96f04 638 Gene3D G3DSA:3.30.1370.120 273 345 3.7E-17 T 13-10-2018 IPR038591 NolW-like superfamily Theam_0896 29a1f6cb4b604ba8528d8e0327a96f04 638 Pfam PF00263 Bacterial type II and III secretion system protein 422 584 1.3E-51 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Theam_0896 29a1f6cb4b604ba8528d8e0327a96f04 638 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 529 562 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 Theam_0896 29a1f6cb4b604ba8528d8e0327a96f04 638 Pfam PF03958 Bacterial type II/III secretion system short domain 277 347 3.6E-16 T 13-10-2018 IPR005644 NolW-like Theam_0896 29a1f6cb4b604ba8528d8e0327a96f04 638 Pfam PF03958 Bacterial type II/III secretion system short domain 196 269 2.6E-9 T 13-10-2018 IPR005644 NolW-like Theam_0896 29a1f6cb4b604ba8528d8e0327a96f04 638 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 35 593 4.7E-143 T 13-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 Theam_0896 29a1f6cb4b604ba8528d8e0327a96f04 638 Gene3D G3DSA:3.30.1370.120 26 188 4.0E-40 T 13-10-2018 IPR038591 NolW-like superfamily Theam_0896 29a1f6cb4b604ba8528d8e0327a96f04 638 PRINTS PR00811 Bacterial general secretion pathway protein D signature 452 462 3.2E-23 T 13-10-2018 IPR001775 GspD/PilQ family Theam_0896 29a1f6cb4b604ba8528d8e0327a96f04 638 PRINTS PR00811 Bacterial general secretion pathway protein D signature 548 566 3.2E-23 T 13-10-2018 IPR001775 GspD/PilQ family Theam_0896 29a1f6cb4b604ba8528d8e0327a96f04 638 PRINTS PR00811 Bacterial general secretion pathway protein D signature 571 585 3.2E-23 T 13-10-2018 IPR001775 GspD/PilQ family Theam_0896 29a1f6cb4b604ba8528d8e0327a96f04 638 PRINTS PR00811 Bacterial general secretion pathway protein D signature 417 441 3.2E-23 T 13-10-2018 IPR001775 GspD/PilQ family Theam_0896 29a1f6cb4b604ba8528d8e0327a96f04 638 PRINTS PR00811 Bacterial general secretion pathway protein D signature 347 357 3.2E-23 T 13-10-2018 IPR001775 GspD/PilQ family Theam_1192 340fca0116d493f4f5feb4cc7821cd89 269 SUPERFAMILY SSF51569 2 257 6.78E-99 T 13-10-2018 Theam_1192 340fca0116d493f4f5feb4cc7821cd89 269 Gene3D G3DSA:3.20.20.70 1 259 7.3E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1192 340fca0116d493f4f5feb4cc7821cd89 269 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 1 258 49.845 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Theam_1192 340fca0116d493f4f5feb4cc7821cd89 269 Pfam PF00793 DAHP synthetase I family 1 243 3.6E-68 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Theam_1192 340fca0116d493f4f5feb4cc7821cd89 269 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 1 255 1.3E-117 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Theam_0512 0b1a798a118563a713a47d5c8d776179 217 TIGRFAM TIGR03879 near_KaiC_dom: probable regulatory domain 25 119 1.3E-38 T 13-10-2018 IPR022285 Conserved hypothetical protein CHP03879, regulatory domain, putative Theam_0611 8c0750920ff1974c0c1a736dbd30b6ef 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 409 1.6E-207 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Theam_0611 8c0750920ff1974c0c1a736dbd30b6ef 413 SMART SM00825 Beta-ketoacyl synthase 5 413 6.0E-19 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Theam_0611 8c0750920ff1974c0c1a736dbd30b6ef 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 246 1.2E-67 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Theam_0611 8c0750920ff1974c0c1a736dbd30b6ef 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 7.9E-42 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Theam_0611 8c0750920ff1974c0c1a736dbd30b6ef 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site Theam_0611 8c0750920ff1974c0c1a736dbd30b6ef 413 SUPERFAMILY SSF53901 3 251 1.07E-87 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Theam_0611 8c0750920ff1974c0c1a736dbd30b6ef 413 Gene3D G3DSA:3.40.47.10 256 400 1.8E-58 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Theam_0611 8c0750920ff1974c0c1a736dbd30b6ef 413 PIRSF PIRSF000447 1 413 3.5E-196 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Theam_0611 8c0750920ff1974c0c1a736dbd30b6ef 413 SUPERFAMILY SSF53901 214 411 9.27E-78 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Theam_0611 8c0750920ff1974c0c1a736dbd30b6ef 413 Gene3D G3DSA:3.40.47.10 1 254 3.9E-102 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Theam_0288 beff7da5ecf4b394baa03119419ea144 266 Gene3D G3DSA:3.40.50.300 3 253 8.2E-69 T 13-10-2018 Theam_0288 beff7da5ecf4b394baa03119419ea144 266 PIRSF PIRSF003092 1 266 1.5E-84 T 13-10-2018 IPR025501 ATP binding protein MinD Theam_0288 beff7da5ecf4b394baa03119419ea144 266 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 218 3.9E-24 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Theam_0288 beff7da5ecf4b394baa03119419ea144 266 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 4 263 7.5E-112 T 13-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 Theam_0288 beff7da5ecf4b394baa03119419ea144 266 SUPERFAMILY SSF52540 4 261 4.25E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1062 5c5dadc710afea97d097e162392eb7a8 168 SUPERFAMILY SSF49764 16 149 2.39E-36 T 13-10-2018 IPR008978 HSP20-like chaperone Theam_1062 5c5dadc710afea97d097e162392eb7a8 168 Pfam PF00011 Hsp20/alpha crystallin family 52 150 6.7E-21 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Theam_1062 5c5dadc710afea97d097e162392eb7a8 168 Gene3D G3DSA:2.60.40.790 8 151 2.5E-39 T 13-10-2018 IPR008978 HSP20-like chaperone Theam_1005 79a970410836ba127790213f0a475ca3 407 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 7.3E-86 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1005 79a970410836ba127790213f0a475ca3 407 SUPERFAMILY SSF55174 297 398 2.88E-17 T 13-10-2018 Theam_1005 79a970410836ba127790213f0a475ca3 407 Pfam PF01479 S4 domain 338 379 1.5E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_1005 79a970410836ba127790213f0a475ca3 407 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 8.0E-25 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Theam_1005 79a970410836ba127790213f0a475ca3 407 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 177 199 8.0E-25 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Theam_1005 79a970410836ba127790213f0a475ca3 407 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 8.0E-25 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Theam_1005 79a970410836ba127790213f0a475ca3 407 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 210 222 8.0E-25 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Theam_1005 79a970410836ba127790213f0a475ca3 407 Gene3D G3DSA:3.10.290.10 327 398 2.5E-20 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Theam_1005 79a970410836ba127790213f0a475ca3 407 SMART SM00363 337 401 7.2E-6 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_1005 79a970410836ba127790213f0a475ca3 407 Gene3D G3DSA:3.40.50.620 1 217 1.1E-81 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1005 79a970410836ba127790213f0a475ca3 407 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1005 79a970410836ba127790213f0a475ca3 407 Gene3D G3DSA:1.10.240.10 218 326 3.7E-39 T 13-10-2018 Theam_1005 79a970410836ba127790213f0a475ca3 407 SUPERFAMILY SSF52374 2 316 2.51E-103 T 13-10-2018 Theam_1005 79a970410836ba127790213f0a475ca3 407 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 6 398 2.9E-127 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Theam_1005 79a970410836ba127790213f0a475ca3 407 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 1 399 49.219 T 13-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 190 201 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 SUPERFAMILY SSF54862 77 209 7.11E-33 T 13-10-2018 Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 33 50 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 124 8.6E-14 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 SUPERFAMILY SSF54292 5 76 1.36E-19 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 219 275 4.9E-12 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 Pfam PF00037 4Fe-4S binding domain 186 203 1.2E-4 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 147 157 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 Gene3D G3DSA:3.10.20.740 4 125 1.1E-40 T 13-10-2018 Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 Gene3D G3DSA:3.30.70.20 128 208 2.9E-20 T 13-10-2018 Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 224 241 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 SUPERFAMILY SSF53706 217 580 2.21E-34 T 13-10-2018 Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 SMART SM00929 85 125 1.3E-14 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 SMART SM00926 219 275 2.0E-11 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 78 1.0E-16 T 13-10-2018 Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 Gene3D G3DSA:3.30.200.210 209 318 2.1E-12 T 13-10-2018 Theam_0737 3c05e80c4c8603f3d252a3e0d8124374 728 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 100 112 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1610 fdb12ef0ff79ef04e93ae1c2af73be63 442 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Theam_1610 fdb12ef0ff79ef04e93ae1c2af73be63 442 Pfam PF01938 TRAM domain 375 434 4.5E-14 T 13-10-2018 IPR002792 TRAM domain Theam_1610 fdb12ef0ff79ef04e93ae1c2af73be63 442 Gene3D G3DSA:3.80.30.20 145 375 1.3E-88 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Theam_1610 fdb12ef0ff79ef04e93ae1c2af73be63 442 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 432 7.7E-154 T 13-10-2018 Theam_1610 fdb12ef0ff79ef04e93ae1c2af73be63 442 SUPERFAMILY SSF102114 125 367 4.19E-65 T 13-10-2018 Theam_1610 fdb12ef0ff79ef04e93ae1c2af73be63 442 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 431 1.6E-148 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Theam_1610 fdb12ef0ff79ef04e93ae1c2af73be63 442 Pfam PF04055 Radical SAM superfamily 151 320 9.7E-33 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_1610 fdb12ef0ff79ef04e93ae1c2af73be63 442 Gene3D G3DSA:3.40.50.12160 3 135 2.6E-36 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Theam_1610 fdb12ef0ff79ef04e93ae1c2af73be63 442 Pfam PF00919 Uncharacterized protein family UPF0004 4 102 5.4E-30 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Theam_1610 fdb12ef0ff79ef04e93ae1c2af73be63 442 SMART SM00729 147 362 2.5E-63 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_1610 fdb12ef0ff79ef04e93ae1c2af73be63 442 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 435 69.676 T 13-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Theam_1319 88e0778f9fe17cc50a6aa29b3eeeaf84 670 SUPERFAMILY SSF56024 311 489 3.36E-56 T 13-10-2018 Theam_1319 88e0778f9fe17cc50a6aa29b3eeeaf84 670 Pfam PF13089 Polyphosphate kinase N-terminal domain 14 118 5.5E-38 T 13-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 Theam_1319 88e0778f9fe17cc50a6aa29b3eeeaf84 670 Gene3D G3DSA:3.30.870.10 498 669 1.3E-65 T 13-10-2018 Theam_1319 88e0778f9fe17cc50a6aa29b3eeeaf84 670 Hamap MF_00347 Polyphosphate kinase [ppk]. 11 667 29.118 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Theam_1319 88e0778f9fe17cc50a6aa29b3eeeaf84 670 Pfam PF13090 Polyphosphate kinase C-terminal domain 325 661 7.4E-152 T 13-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 Theam_1319 88e0778f9fe17cc50a6aa29b3eeeaf84 670 Pfam PF02503 Polyphosphate kinase middle domain 130 318 2.5E-65 T 13-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 Theam_1319 88e0778f9fe17cc50a6aa29b3eeeaf84 670 Gene3D G3DSA:3.30.1840.10 7 308 1.4E-102 T 13-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 Theam_1319 88e0778f9fe17cc50a6aa29b3eeeaf84 670 SUPERFAMILY SSF143724 117 309 3.34E-55 T 13-10-2018 Theam_1319 88e0778f9fe17cc50a6aa29b3eeeaf84 670 SUPERFAMILY SSF56024 494 667 4.71E-66 T 13-10-2018 Theam_1319 88e0778f9fe17cc50a6aa29b3eeeaf84 670 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 14 661 5.6E-259 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Theam_1319 88e0778f9fe17cc50a6aa29b3eeeaf84 670 PIRSF PIRSF015589 1 669 2.5E-276 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Theam_1319 88e0778f9fe17cc50a6aa29b3eeeaf84 670 SUPERFAMILY SSF140356 10 112 1.31E-38 T 13-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 Theam_1319 88e0778f9fe17cc50a6aa29b3eeeaf84 670 Gene3D G3DSA:3.30.870.10 318 495 1.6E-71 T 13-10-2018 Theam_0120 51b0335dbdcd20a0adb4c85162c252cd 137 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 136 26.092 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Theam_0120 51b0335dbdcd20a0adb4c85162c252cd 137 Pfam PF02590 Predicted SPOUT methyltransferase 2 135 6.3E-37 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Theam_0120 51b0335dbdcd20a0adb4c85162c252cd 137 PIRSF PIRSF004505 1 136 8.2E-37 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Theam_0120 51b0335dbdcd20a0adb4c85162c252cd 137 SUPERFAMILY SSF75217 2 134 3.84E-34 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Theam_0120 51b0335dbdcd20a0adb4c85162c252cd 137 Gene3D G3DSA:3.40.1280.10 1 137 1.2E-40 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Theam_1672 c7f5a92b3b4399865640d132751450b6 297 SUPERFAMILY SSF55060 158 268 3.84E-29 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Theam_1672 c7f5a92b3b4399865640d132751450b6 297 Gene3D G3DSA:3.30.70.890 156 260 1.5E-87 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Theam_1672 c7f5a92b3b4399865640d132751450b6 297 Hamap MF_00384 Homoserine kinase [thrB]. 5 295 30.345 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Theam_1672 c7f5a92b3b4399865640d132751450b6 297 SUPERFAMILY SSF54211 1 151 8.35E-32 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_1672 c7f5a92b3b4399865640d132751450b6 297 Gene3D G3DSA:3.30.230.10 5 155 1.5E-87 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Theam_1672 c7f5a92b3b4399865640d132751450b6 297 Pfam PF00288 GHMP kinases N terminal domain 80 138 1.0E-8 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Theam_1672 c7f5a92b3b4399865640d132751450b6 297 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 84 95 - T 13-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 Theam_1672 c7f5a92b3b4399865640d132751450b6 297 PIRSF PIRSF000676 1 297 3.5E-89 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Theam_1672 c7f5a92b3b4399865640d132751450b6 297 Pfam PF08544 GHMP kinases C terminal 199 273 4.0E-9 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain Theam_1672 c7f5a92b3b4399865640d132751450b6 297 PRINTS PR00958 Homoserine kinase signature 163 180 1.9E-33 T 13-10-2018 Theam_1672 c7f5a92b3b4399865640d132751450b6 297 PRINTS PR00958 Homoserine kinase signature 10 25 1.9E-33 T 13-10-2018 Theam_1672 c7f5a92b3b4399865640d132751450b6 297 PRINTS PR00958 Homoserine kinase signature 242 257 1.9E-33 T 13-10-2018 Theam_1672 c7f5a92b3b4399865640d132751450b6 297 PRINTS PR00958 Homoserine kinase signature 125 138 1.9E-33 T 13-10-2018 Theam_1672 c7f5a92b3b4399865640d132751450b6 297 PRINTS PR00958 Homoserine kinase signature 91 106 1.9E-33 T 13-10-2018 Theam_1672 c7f5a92b3b4399865640d132751450b6 297 TIGRFAM TIGR00191 thrB: homoserine kinase 3 296 1.1E-85 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Theam_0137 061b3c9da34c4c37e6b9c6fd046aeeed 431 SUPERFAMILY SSF142695 211 383 5.36E-80 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Theam_0137 061b3c9da34c4c37e6b9c6fd046aeeed 431 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 12 205 5.4E-87 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Theam_0137 061b3c9da34c4c37e6b9c6fd046aeeed 431 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 7 402 56.411 T 13-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Theam_0137 061b3c9da34c4c37e6b9c6fd046aeeed 431 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 211 406 42.622 T 13-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Theam_0137 061b3c9da34c4c37e6b9c6fd046aeeed 431 Pfam PF00925 GTP cyclohydrolase II 215 380 1.7E-78 T 13-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Theam_0137 061b3c9da34c4c37e6b9c6fd046aeeed 431 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 215 404 1.8E-82 T 13-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Theam_0137 061b3c9da34c4c37e6b9c6fd046aeeed 431 PIRSF PIRSF001259 7 413 8.5E-191 T 13-10-2018 Theam_0137 061b3c9da34c4c37e6b9c6fd046aeeed 431 SUPERFAMILY SSF55821 6 209 3.89E-86 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Theam_0137 061b3c9da34c4c37e6b9c6fd046aeeed 431 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 6 210 40.51 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Theam_0137 061b3c9da34c4c37e6b9c6fd046aeeed 431 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 8 206 5.6E-79 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Theam_0137 061b3c9da34c4c37e6b9c6fd046aeeed 431 Gene3D G3DSA:3.40.50.10990 213 384 2.8E-81 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Theam_0137 061b3c9da34c4c37e6b9c6fd046aeeed 431 Gene3D G3DSA:3.90.870.10 1 212 2.4E-92 T 13-10-2018 Theam_1112 96d5fce85f0c91a7478c518798c72e60 135 Gene3D G3DSA:1.10.1220.10 5 50 2.0E-19 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Theam_1112 96d5fce85f0c91a7478c518798c72e60 135 Hamap MF_00476 Nickel-responsive regulator [nikR]. 4 133 28.612 T 13-10-2018 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 Theam_1112 96d5fce85f0c91a7478c518798c72e60 135 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 43 5.2E-9 T 13-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Theam_1112 96d5fce85f0c91a7478c518798c72e60 135 Gene3D G3DSA:3.30.70.1150 52 134 3.2E-34 T 13-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Theam_1112 96d5fce85f0c91a7478c518798c72e60 135 SUPERFAMILY SSF47598 4 48 6.23E-11 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Theam_1112 96d5fce85f0c91a7478c518798c72e60 135 SUPERFAMILY SSF55021 54 134 4.73E-29 T 13-10-2018 Theam_1112 96d5fce85f0c91a7478c518798c72e60 135 Pfam PF08753 NikR C terminal nickel binding domain 56 130 2.6E-34 T 13-10-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal Theam_1577 793cc6bfbe7d8c5aba17ae2174277652 548 TIGRFAM TIGR01178 ade: adenine deaminase 11 545 2.5E-175 T 13-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Theam_1577 793cc6bfbe7d8c5aba17ae2174277652 548 Pfam PF01979 Amidohydrolase family 48 326 7.1E-28 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Theam_1577 793cc6bfbe7d8c5aba17ae2174277652 548 Hamap MF_01518 Adenine deaminase [ade]. 8 545 33.936 T 13-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Theam_1577 793cc6bfbe7d8c5aba17ae2174277652 548 Gene3D G3DSA:3.20.20.140 52 293 1.1E-90 T 13-10-2018 Theam_1577 793cc6bfbe7d8c5aba17ae2174277652 548 SUPERFAMILY SSF51338 10 335 3.78E-6 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Theam_1577 793cc6bfbe7d8c5aba17ae2174277652 548 Gene3D G3DSA:2.30.40.10 11 329 1.1E-90 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Theam_1577 793cc6bfbe7d8c5aba17ae2174277652 548 Pfam PF13382 Adenine deaminase C-terminal domain 377 542 1.8E-58 T 13-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Theam_1577 793cc6bfbe7d8c5aba17ae2174277652 548 SUPERFAMILY SSF51556 53 294 3.18E-28 T 13-10-2018 IPR032466 Metal-dependent hydrolase Theam_0757 5370d06835ca9c58fc0c10d106633d55 278 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 13 259 48.121 T 13-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 Theam_0757 5370d06835ca9c58fc0c10d106633d55 278 SUPERFAMILY SSF52402 9 259 1.39E-75 T 13-10-2018 Theam_0757 5370d06835ca9c58fc0c10d106633d55 278 Gene3D G3DSA:3.40.50.620 11 261 2.8E-88 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_0757 5370d06835ca9c58fc0c10d106633d55 278 TIGRFAM TIGR00552 nadE: NAD+ synthetase 19 260 5.6E-76 T 13-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Theam_0757 5370d06835ca9c58fc0c10d106633d55 278 Pfam PF02540 NAD synthase 21 256 4.1E-83 T 13-10-2018 IPR022310 NAD/GMP synthase Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 Gene3D G3DSA:2.20.25.90 223 269 8.8E-10 T 13-10-2018 Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 122 133 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 Pfam PF01568 Molydopterin dinucleotide binding domain 1017 1141 1.1E-14 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 Gene3D G3DSA:3.40.50.740 720 832 3.7E-10 T 13-10-2018 Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 Pfam PF00384 Molybdopterin oxidoreductase 429 820 8.1E-15 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 Gene3D G3DSA:3.40.228.10 413 719 1.2E-45 T 13-10-2018 Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 230 266 2.9E-8 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 SUPERFAMILY SSF50692 1004 1171 1.4E-24 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 Gene3D G3DSA:3.30.70.20 96 147 1.2E-41 T 13-10-2018 Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 SUPERFAMILY SSF54862 35 194 1.09E-45 T 13-10-2018 Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 Gene3D G3DSA:3.30.70.20 35 196 1.2E-41 T 13-10-2018 Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 Gene3D G3DSA:2.40.40.20 1005 1172 3.1E-24 T 13-10-2018 Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 Pfam PF13247 4Fe-4S dicluster domain 88 177 5.6E-18 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 Gene3D G3DSA:3.40.50.740 303 333 3.7E-6 T 13-10-2018 Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 SUPERFAMILY SSF53706 223 959 2.17E-100 T 13-10-2018 Theam_1226 ce251e0671db3095f6d172cb67aafffc 1172 SMART SM00926 228 300 1.4E-8 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1242 5f57a0a9a63912077ca5ace8d18fa649 365 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 9.5E-168 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Theam_1242 5f57a0a9a63912077ca5ace8d18fa649 365 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Theam_1242 5f57a0a9a63912077ca5ace8d18fa649 365 SMART SM00937 70 181 5.6E-64 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 Theam_1242 5f57a0a9a63912077ca5ace8d18fa649 365 Gene3D G3DSA:3.30.160.20 213 299 6.2E-103 T 13-10-2018 Theam_1242 5f57a0a9a63912077ca5ace8d18fa649 365 Pfam PF00472 RF-1 domain 214 323 2.4E-43 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Theam_1242 5f57a0a9a63912077ca5ace8d18fa649 365 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.898 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Theam_1242 5f57a0a9a63912077ca5ace8d18fa649 365 Gene3D G3DSA:3.30.70.1660 114 344 6.2E-103 T 13-10-2018 Theam_1242 5f57a0a9a63912077ca5ace8d18fa649 365 SUPERFAMILY SSF75620 12 355 1.96E-140 T 13-10-2018 Theam_1242 5f57a0a9a63912077ca5ace8d18fa649 365 Gene3D G3DSA:1.20.58.410 3 97 3.5E-7 T 13-10-2018 Theam_1242 5f57a0a9a63912077ca5ace8d18fa649 365 Pfam PF03462 PCRF domain 13 206 2.8E-77 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 687 2.0E-301 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 Gene3D G3DSA:3.30.230.70 231 547 1.2E-122 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 SUPERFAMILY SSF55666 447 546 1.44E-28 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 SUPERFAMILY SSF54211 288 485 5.57E-53 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 Pfam PF00013 KH domain 556 611 5.0E-9 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 SUPERFAMILY SSF54211 3 143 4.35E-48 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 PIRSF PIRSF005499 1 714 8.5E-301 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 Pfam PF01138 3' exoribonuclease family, domain 1 13 143 3.5E-23 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 Pfam PF01138 3' exoribonuclease family, domain 1 320 453 2.9E-24 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 SUPERFAMILY SSF54791 552 637 5.5E-21 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 SMART SM00322 549 614 5.8E-10 T 13-10-2018 IPR004087 K Homology domain GO:0003676 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 Gene3D G3DSA:2.40.50.140 548 669 1.3E-38 T 13-10-2018 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 Gene3D G3DSA:3.30.230.70 1 228 1.3E-87 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 317 8.1E-14 T 13-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 Pfam PF00575 S1 RNA binding domain 616 681 2.8E-13 T 13-10-2018 IPR003029 S1 domain GO:0003676 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 SUPERFAMILY SSF55666 144 234 2.88E-27 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 SUPERFAMILY SSF50249 614 692 6.21E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 SMART SM00316 617 687 1.7E-18 T 13-10-2018 IPR022967 RNA-binding domain, S1 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 Pfam PF03725 3' exoribonuclease family, domain 2 457 525 4.5E-6 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 Pfam PF03725 3' exoribonuclease family, domain 2 147 209 7.2E-16 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Theam_0246 38c9709337844f3ce71c2f1820e9e312 714 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 690 30.564 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Theam_0170 1d50fb69bf93fb02629b8426eec07c32 303 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 1 302 2.9E-105 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Theam_0170 1d50fb69bf93fb02629b8426eec07c32 303 Gene3D G3DSA:3.40.50.10800 9 283 2.2E-117 T 13-10-2018 Theam_0170 1d50fb69bf93fb02629b8426eec07c32 303 SUPERFAMILY SSF142754 5 301 6.93E-112 T 13-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Theam_0170 1d50fb69bf93fb02629b8426eec07c32 303 Gene3D G3DSA:3.40.50.10800 172 258 2.2E-117 T 13-10-2018 Theam_0170 1d50fb69bf93fb02629b8426eec07c32 303 Hamap MF_00568 Quinolinate synthase A [nadA]. 4 302 43.865 T 13-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Theam_0170 1d50fb69bf93fb02629b8426eec07c32 303 Pfam PF02445 Quinolinate synthetase A protein 9 301 3.0E-119 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Theam_0170 1d50fb69bf93fb02629b8426eec07c32 303 Gene3D G3DSA:3.40.50.10800 88 301 2.2E-117 T 13-10-2018 Theam_0781 930eeb89e6979344a51791c826879193 362 SUPERFAMILY SSF48695 16 301 4.59E-21 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_0296 9879d980470a67e6ed246575e693e568 164 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 164 52.84 T 13-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Theam_0296 9879d980470a67e6ed246575e693e568 164 SUPERFAMILY SSF55620 24 132 8.15E-26 T 13-10-2018 Theam_0296 9879d980470a67e6ed246575e693e568 164 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 23 133 4.2E-50 T 13-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Theam_0296 9879d980470a67e6ed246575e693e568 164 Pfam PF14489 QueF-like protein 58 133 1.1E-32 T 13-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Theam_0296 9879d980470a67e6ed246575e693e568 164 Gene3D G3DSA:3.30.1130.10 17 162 1.1E-51 T 13-10-2018 Theam_0912 cf3561b6b885078b5111a2eccdc56157 313 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 103 180 2.0E-32 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Theam_0912 cf3561b6b885078b5111a2eccdc56157 313 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 312 1.4E-126 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Theam_0912 cf3561b6b885078b5111a2eccdc56157 313 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 313 71.417 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Theam_0912 cf3561b6b885078b5111a2eccdc56157 313 SUPERFAMILY SSF53901 4 312 2.18E-66 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Theam_0912 cf3561b6b885078b5111a2eccdc56157 313 Gene3D G3DSA:3.40.47.10 1 313 4.0E-133 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Theam_0912 cf3561b6b885078b5111a2eccdc56157 313 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 224 312 5.9E-39 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Theam_1733 ac78e38bd73306dd9ba7fe6480e1fc08 174 SUPERFAMILY SSF53955 94 163 1.22E-7 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Theam_1075 880b96ae8ca64dc3fb85cdebc155e517 398 Pfam PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) 2 394 3.6E-170 T 13-10-2018 IPR027790 S-adenosylmethionine synthase KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912 Theam_1075 880b96ae8ca64dc3fb85cdebc155e517 398 Gene3D G3DSA:3.30.300.10 25 152 5.7E-159 T 13-10-2018 Theam_1075 880b96ae8ca64dc3fb85cdebc155e517 398 Gene3D G3DSA:3.30.300.340 13 281 5.7E-159 T 13-10-2018 Theam_1075 880b96ae8ca64dc3fb85cdebc155e517 398 Gene3D G3DSA:3.30.300.280 11 391 5.7E-159 T 13-10-2018 Theam_1075 880b96ae8ca64dc3fb85cdebc155e517 398 ProDom PD011777 SYNTHETASE TRANSFERASE METHIONINE ADENOSYLTRANSFERASE S-ADENOSYLMETHIONINE NUCLEOTIDE-BINDING METABOLISM ATP-BINDING MAGNESIUM ONE-CARBON 2 383 3.0E-138 T 13-10-2018 Theam_1583 cfd2a06f13db6d505993d180d16cb255 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 13-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_1583 cfd2a06f13db6d505993d180d16cb255 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 30.833 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Theam_1583 cfd2a06f13db6d505993d180d16cb255 141 Gene3D G3DSA:1.10.10.250 72 139 5.4E-29 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Theam_1583 cfd2a06f13db6d505993d180d16cb255 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 5.6E-25 T 13-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Theam_1583 cfd2a06f13db6d505993d180d16cb255 141 SUPERFAMILY SSF54747 1 84 1.96E-30 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Theam_1583 cfd2a06f13db6d505993d180d16cb255 141 SMART SM00649 9 140 3.8E-84 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Theam_1583 cfd2a06f13db6d505993d180d16cb255 141 SUPERFAMILY SSF46906 67 140 1.44E-26 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Theam_1583 cfd2a06f13db6d505993d180d16cb255 141 Gene3D G3DSA:3.30.1550.10 2 71 1.2E-33 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Theam_1583 cfd2a06f13db6d505993d180d16cb255 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 5.0E-10 T 13-10-2018 Theam_1583 cfd2a06f13db6d505993d180d16cb255 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 3.0E-31 T 13-10-2018 IPR020784 Ribosomal protein L11, N-terminal Theam_1583 cfd2a06f13db6d505993d180d16cb255 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.3E-64 T 13-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0724 d6af2e2057bfb58b8129c28637933934 543 Pfam PF08275 DNA primase catalytic core, N-terminal domain 124 235 2.1E-28 T 13-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Theam_0724 d6af2e2057bfb58b8129c28637933934 543 SUPERFAMILY SSF57783 7 100 2.21E-35 T 13-10-2018 Theam_0724 d6af2e2057bfb58b8129c28637933934 543 SMART SM00400 37 91 7.9E-32 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Theam_0724 d6af2e2057bfb58b8129c28637933934 543 Gene3D G3DSA:3.90.980.10 104 223 4.3E-25 T 13-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Theam_0724 d6af2e2057bfb58b8129c28637933934 543 Pfam PF01807 CHC2 zinc finger 7 100 3.2E-37 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Theam_0724 d6af2e2057bfb58b8129c28637933934 543 Gene3D G3DSA:3.40.1360.10 224 343 7.6E-38 T 13-10-2018 Theam_0724 d6af2e2057bfb58b8129c28637933934 543 Hamap MF_00974 DNA primase [dnaG]. 5 531 25.993 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Theam_0724 d6af2e2057bfb58b8129c28637933934 543 Pfam PF13155 Toprim-like 245 328 2.9E-18 T 13-10-2018 Theam_0724 d6af2e2057bfb58b8129c28637933934 543 SUPERFAMILY SSF56731 118 401 9.16E-75 T 13-10-2018 Theam_0724 d6af2e2057bfb58b8129c28637933934 543 SMART SM00493 242 313 2.5E-14 T 13-10-2018 IPR006171 TOPRIM domain Theam_0724 d6af2e2057bfb58b8129c28637933934 543 PIRSF PIRSF002811 4 430 5.0E-131 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Theam_0724 d6af2e2057bfb58b8129c28637933934 543 PIRSF PIRSF002811 483 531 440.0 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Theam_0724 d6af2e2057bfb58b8129c28637933934 543 TIGRFAM TIGR01391 dnaG: DNA primase 6 377 3.2E-117 T 13-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Theam_0724 d6af2e2057bfb58b8129c28637933934 543 Gene3D G3DSA:3.90.580.10 3 102 5.3E-40 T 13-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Theam_1498 b17837b1f5bebe70046b29d8ff2fbe6a 111 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 19 105 2.1E-12 T 13-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1498 b17837b1f5bebe70046b29d8ff2fbe6a 111 Gene3D G3DSA:1.20.58.1610 1 109 2.2E-14 T 13-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0510 2b5cce677e80f1a617178187d9c5f60e 114 SUPERFAMILY SSF54913 7 106 8.12E-31 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Theam_0510 2b5cce677e80f1a617178187d9c5f60e 114 Gene3D G3DSA:3.30.70.120 2 109 6.4E-37 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Theam_0510 2b5cce677e80f1a617178187d9c5f60e 114 Pfam PF02641 Uncharacterized ACR, COG1993 9 105 2.4E-36 T 13-10-2018 IPR003793 Domain of unknown function DUF190 Theam_0618 80553a21b7b61e61113ccdd148b037c1 258 Gene3D G3DSA:2.160.10.10 1 190 2.4E-50 T 13-10-2018 Theam_0618 80553a21b7b61e61113ccdd148b037c1 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 104 137 4.4E-8 T 13-10-2018 IPR001451 Hexapeptide repeat Theam_0618 80553a21b7b61e61113ccdd148b037c1 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 18 48 1.7E-6 T 13-10-2018 IPR001451 Hexapeptide repeat Theam_0618 80553a21b7b61e61113ccdd148b037c1 258 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 256 3.9E-103 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Theam_0618 80553a21b7b61e61113ccdd148b037c1 258 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 175 256 1.0E-28 T 13-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 Theam_0618 80553a21b7b61e61113ccdd148b037c1 258 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 148 176 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Theam_0618 80553a21b7b61e61113ccdd148b037c1 258 PIRSF PIRSF000456 1 258 6.5E-104 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Theam_0618 80553a21b7b61e61113ccdd148b037c1 258 Gene3D G3DSA:1.20.1180.10 192 256 1.8E-21 T 13-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 Theam_0618 80553a21b7b61e61113ccdd148b037c1 258 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 257 43.065 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Theam_0618 80553a21b7b61e61113ccdd148b037c1 258 SUPERFAMILY SSF51161 2 256 1.18E-76 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Theam_1305 a41e41fc76edc63ba8963f2cf87d8add 419 Pfam PF16916 Dimerisation domain of Zinc Transporter 207 282 4.2E-16 T 13-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Theam_1305 a41e41fc76edc63ba8963f2cf87d8add 419 SUPERFAMILY SSF160240 206 283 5.89E-15 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Theam_1305 a41e41fc76edc63ba8963f2cf87d8add 419 Gene3D G3DSA:3.30.420.130 288 394 1.7E-9 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Theam_1305 a41e41fc76edc63ba8963f2cf87d8add 419 SUPERFAMILY SSF161111 7 203 6.54E-43 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Theam_1305 a41e41fc76edc63ba8963f2cf87d8add 419 Gene3D G3DSA:1.20.1510.10 7 202 4.5E-46 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Theam_1305 a41e41fc76edc63ba8963f2cf87d8add 419 Pfam PF01545 Cation efflux family 13 202 1.5E-37 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Theam_1305 a41e41fc76edc63ba8963f2cf87d8add 419 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 295 389 1.3E-6 T 13-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Theam_1305 a41e41fc76edc63ba8963f2cf87d8add 419 SUPERFAMILY SSF53146 289 405 8.89E-11 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Theam_1305 a41e41fc76edc63ba8963f2cf87d8add 419 Gene3D G3DSA:3.30.70.1350 203 284 4.9E-13 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Theam_1305 a41e41fc76edc63ba8963f2cf87d8add 419 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 8 284 2.6E-61 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Theam_0536 5412c01e0a6bb127ab8599d0a7dd7778 145 Gene3D G3DSA:3.40.630.30 5 145 9.5E-42 T 13-10-2018 Theam_0536 5412c01e0a6bb127ab8599d0a7dd7778 145 SUPERFAMILY SSF55729 1 143 1.52E-34 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Theam_0536 5412c01e0a6bb127ab8599d0a7dd7778 145 Pfam PF00583 Acetyltransferase (GNAT) family 16 123 5.1E-22 T 13-10-2018 IPR000182 GNAT domain Theam_0536 5412c01e0a6bb127ab8599d0a7dd7778 145 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 13 140 4.5E-35 T 13-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 Theam_1191 c06c171287c8d9bd94ec2b139aa01af3 219 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 194 210 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Theam_1191 c06c171287c8d9bd94ec2b139aa01af3 219 SMART SM00478 45 192 1.1E-63 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Theam_1191 c06c171287c8d9bd94ec2b139aa01af3 219 Pfam PF00633 Helix-hairpin-helix motif 107 132 2.5E-8 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Theam_1191 c06c171287c8d9bd94ec2b139aa01af3 219 Hamap MF_00942 Endonuclease III [nth]. 3 216 32.941 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Theam_1191 c06c171287c8d9bd94ec2b139aa01af3 219 SUPERFAMILY SSF48150 33 216 3.77E-69 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Theam_1191 c06c171287c8d9bd94ec2b139aa01af3 219 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 41 175 1.0E-28 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Theam_1191 c06c171287c8d9bd94ec2b139aa01af3 219 Gene3D G3DSA:1.10.1670.10 140 210 5.9E-69 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Theam_1191 c06c171287c8d9bd94ec2b139aa01af3 219 ProSitePatterns PS01155 Endonuclease III family signature. 109 138 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Theam_1191 c06c171287c8d9bd94ec2b139aa01af3 219 PIRSF PIRSF001435 7 219 1.8E-49 T 13-10-2018 Theam_1191 c06c171287c8d9bd94ec2b139aa01af3 219 SMART SM00525 193 213 0.0015 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Theam_1191 c06c171287c8d9bd94ec2b139aa01af3 219 Gene3D G3DSA:1.10.340.30 34 139 5.9E-69 T 13-10-2018 Theam_0480 568cbb7ca937371640dcd1d5f1095c20 177 Gene3D G3DSA:3.40.50.12280 2 158 3.8E-54 T 13-10-2018 Theam_0480 568cbb7ca937371640dcd1d5f1095c20 177 SUPERFAMILY SSF56770 6 140 4.71E-54 T 13-10-2018 Theam_0480 568cbb7ca937371640dcd1d5f1095c20 177 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 21 131 1.0E-26 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1540 0843635457d7d6384b8c6ead1a232126 618 Pfam PF00364 Biotin-requiring enzyme 549 615 7.7E-20 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Theam_1540 0843635457d7d6384b8c6ead1a232126 618 SUPERFAMILY SSF89000 297 443 1.53E-56 T 13-10-2018 Theam_1540 0843635457d7d6384b8c6ead1a232126 618 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 612 1.9E-257 T 13-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 Theam_1540 0843635457d7d6384b8c6ead1a232126 618 SUPERFAMILY SSF51230 543 616 3.66E-23 T 13-10-2018 IPR011053 Single hybrid motif Theam_1540 0843635457d7d6384b8c6ead1a232126 618 SUPERFAMILY SSF51569 2 301 8.24E-91 T 13-10-2018 Theam_1540 0843635457d7d6384b8c6ead1a232126 618 Pfam PF00682 HMGL-like 4 269 2.1E-42 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Theam_1540 0843635457d7d6384b8c6ead1a232126 618 Gene3D G3DSA:3.20.20.70 1 450 2.0E-180 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1540 0843635457d7d6384b8c6ead1a232126 618 Pfam PF02436 Conserved carboxylase domain 292 488 1.9E-63 T 13-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Theam_1540 0843635457d7d6384b8c6ead1a232126 618 Gene3D G3DSA:2.40.50.100 541 616 5.6E-28 T 13-10-2018 Theam_1540 0843635457d7d6384b8c6ead1a232126 618 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 572 589 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Theam_1138 32aa0ba55c69732bd872dc63354e51fb 485 SUPERFAMILY SSF89095 298 406 2.75E-30 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Theam_1138 32aa0ba55c69732bd872dc63354e51fb 485 Gene3D G3DSA:1.10.150.380 298 417 8.1E-36 T 13-10-2018 Theam_1138 32aa0ba55c69732bd872dc63354e51fb 485 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 483 40.922 T 13-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Theam_1138 32aa0ba55c69732bd872dc63354e51fb 485 SMART SM00845 329 482 6.1E-66 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Theam_1138 32aa0ba55c69732bd872dc63354e51fb 485 Pfam PF02637 GatB domain 330 482 6.0E-48 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Theam_1138 32aa0ba55c69732bd872dc63354e51fb 485 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 482 2.2E-192 T 13-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Theam_1138 32aa0ba55c69732bd872dc63354e51fb 485 Pfam PF02934 GatB/GatE catalytic domain 5 289 1.0E-121 T 13-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 Theam_1138 32aa0ba55c69732bd872dc63354e51fb 485 Gene3D G3DSA:1.10.10.410 418 485 9.0E-23 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Theam_1138 32aa0ba55c69732bd872dc63354e51fb 485 SUPERFAMILY SSF55931 4 297 1.05E-127 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Theam_1138 32aa0ba55c69732bd872dc63354e51fb 485 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 145 159 - T 13-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 Theam_0327 6fe0202e1b72cbd49ee67a89d5c58520 1446 Gene3D G3DSA:3.20.20.70 465 1145 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0327 6fe0202e1b72cbd49ee67a89d5c58520 1446 Pfam PF01493 GXGXG motif 1207 1390 8.1E-68 T 13-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Theam_0327 6fe0202e1b72cbd49ee67a89d5c58520 1446 Pfam PF01645 Conserved region in glutamate synthase 771 1129 4.0E-145 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Theam_0327 6fe0202e1b72cbd49ee67a89d5c58520 1446 Gene3D G3DSA:2.160.20.60 1180 1444 1.0E-87 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Theam_0327 6fe0202e1b72cbd49ee67a89d5c58520 1446 Pfam PF00310 Glutamine amidotransferases class-II 9 408 9.7E-133 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Theam_0327 6fe0202e1b72cbd49ee67a89d5c58520 1446 SUPERFAMILY SSF51395 438 1142 2.15E-208 T 13-10-2018 Theam_0327 6fe0202e1b72cbd49ee67a89d5c58520 1446 Gene3D G3DSA:3.20.20.70 419 766 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0327 6fe0202e1b72cbd49ee67a89d5c58520 1446 Gene3D G3DSA:3.60.20.10 9 527 0.0 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Theam_0327 6fe0202e1b72cbd49ee67a89d5c58520 1446 SUPERFAMILY SSF69336 1184 1432 9.02E-74 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Theam_0327 6fe0202e1b72cbd49ee67a89d5c58520 1446 Pfam PF04898 Glutamate synthase central domain 441 711 3.1E-86 T 13-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Theam_0327 6fe0202e1b72cbd49ee67a89d5c58520 1446 SUPERFAMILY SSF56235 9 407 8.97E-115 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Theam_0674 fbf1f3da3d192fc9ccbd9fe08f40321c 370 Pfam PF00534 Glycosyl transferases group 1 195 336 1.5E-28 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Theam_0674 fbf1f3da3d192fc9ccbd9fe08f40321c 370 Pfam PF13439 Glycosyltransferase Family 4 48 192 1.8E-12 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Theam_0674 fbf1f3da3d192fc9ccbd9fe08f40321c 370 Gene3D G3DSA:3.40.50.2000 4 195 1.4E-5 T 13-10-2018 Theam_0674 fbf1f3da3d192fc9ccbd9fe08f40321c 370 Gene3D G3DSA:3.40.50.2000 196 345 1.2E-27 T 13-10-2018 Theam_0674 fbf1f3da3d192fc9ccbd9fe08f40321c 370 SUPERFAMILY SSF53756 4 367 1.41E-60 T 13-10-2018 Theam_1511 798408720c6f7e494ce1a3748dcf3ef3 320 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 320 123.33 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Theam_1511 798408720c6f7e494ce1a3748dcf3ef3 320 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 231 306 8.0E-20 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Theam_1511 798408720c6f7e494ce1a3748dcf3ef3 320 Gene3D G3DSA:1.10.8.60 162 236 2.7E-23 T 13-10-2018 Theam_1511 798408720c6f7e494ce1a3748dcf3ef3 320 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 214 1.0E-87 T 13-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Theam_1511 798408720c6f7e494ce1a3748dcf3ef3 320 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 7 306 1.2E-115 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Theam_1511 798408720c6f7e494ce1a3748dcf3ef3 320 SMART SM00382 34 162 3.6E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1511 798408720c6f7e494ce1a3748dcf3ef3 320 SUPERFAMILY SSF46785 237 307 5.44E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_1511 798408720c6f7e494ce1a3748dcf3ef3 320 SUPERFAMILY SSF52540 4 230 4.79E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1511 798408720c6f7e494ce1a3748dcf3ef3 320 Gene3D G3DSA:1.10.10.10 237 317 1.6E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_1511 798408720c6f7e494ce1a3748dcf3ef3 320 Gene3D G3DSA:3.40.50.300 2 161 3.5E-41 T 13-10-2018 Theam_1511 798408720c6f7e494ce1a3748dcf3ef3 320 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 233 306 8.3E-29 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Theam_0359 1bce2421455f485048de82228ea6c51f 374 SUPERFAMILY SSF51338 14 72 2.66E-5 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Theam_0359 1bce2421455f485048de82228ea6c51f 374 Pfam PF01979 Amidohydrolase family 154 338 1.8E-18 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Theam_0359 1bce2421455f485048de82228ea6c51f 374 SUPERFAMILY SSF51556 54 336 7.56E-47 T 13-10-2018 IPR032466 Metal-dependent hydrolase Theam_0359 1bce2421455f485048de82228ea6c51f 374 Gene3D G3DSA:3.20.20.140 53 336 2.3E-46 T 13-10-2018 Theam_1771 0e51e52ff4ed7ba062f4febd5c7cf872 274 Gene3D G3DSA:3.40.50.300 1 162 1.0E-17 T 13-10-2018 Theam_1771 0e51e52ff4ed7ba062f4febd5c7cf872 274 Pfam PF07728 AAA domain (dynein-related subfamily) 4 135 2.2E-12 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Theam_1771 0e51e52ff4ed7ba062f4febd5c7cf872 274 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 4 22 2.5E-5 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Theam_1771 0e51e52ff4ed7ba062f4febd5c7cf872 274 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 86 104 2.5E-5 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Theam_1771 0e51e52ff4ed7ba062f4febd5c7cf872 274 SUPERFAMILY SSF52540 3 162 1.57E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1714 1cdea24591bc593caa083e30315626a5 184 Pfam PF00037 4Fe-4S binding domain 154 170 8.1E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_1714 1cdea24591bc593caa083e30315626a5 184 Pfam PF12838 4Fe-4S dicluster domain 47 100 1.5E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_1714 1cdea24591bc593caa083e30315626a5 184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 157 168 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_1714 1cdea24591bc593caa083e30315626a5 184 Gene3D G3DSA:3.30.70.20 125 179 2.3E-8 T 13-10-2018 Theam_1714 1cdea24591bc593caa083e30315626a5 184 SUPERFAMILY SSF54862 37 170 1.15E-21 T 13-10-2018 Theam_1714 1cdea24591bc593caa083e30315626a5 184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 86 97 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_1714 1cdea24591bc593caa083e30315626a5 184 Gene3D G3DSA:3.30.70.20 42 115 1.9E-10 T 13-10-2018 Theam_1714 1cdea24591bc593caa083e30315626a5 184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 48 59 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0366 03ba46913eb94a7e8eb4316a0c07fbb8 657 Gene3D G3DSA:1.10.287.950 327 657 3.2E-55 T 13-10-2018 Theam_0366 03ba46913eb94a7e8eb4316a0c07fbb8 657 Pfam PF08376 Nitrate and nitrite sensing 52 286 4.8E-53 T 13-10-2018 IPR013587 Nitrate/nitrite sensing protein Theam_0366 03ba46913eb94a7e8eb4316a0c07fbb8 657 SUPERFAMILY SSF58104 348 657 5.36E-53 T 13-10-2018 Theam_0366 03ba46913eb94a7e8eb4316a0c07fbb8 657 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 466 626 5.8E-29 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Theam_0366 03ba46913eb94a7e8eb4316a0c07fbb8 657 Pfam PF00672 HAMP domain 328 376 1.2E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Theam_0366 03ba46913eb94a7e8eb4316a0c07fbb8 657 SMART SM00304 328 380 2.4E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Theam_0366 03ba46913eb94a7e8eb4316a0c07fbb8 657 SMART SM00283 388 656 6.4E-33 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Theam_1123 42495716103113d83c357bca88379165 215 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 8 212 4.8E-45 T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Theam_1123 42495716103113d83c357bca88379165 215 Pfam PF01292 Prokaryotic cytochrome b561 9 207 1.3E-22 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Theam_1123 42495716103113d83c357bca88379165 215 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 168 190 1.2E-19 T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Theam_1123 42495716103113d83c357bca88379165 215 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 199 212 1.2E-19 T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Theam_1123 42495716103113d83c357bca88379165 215 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 50 74 1.2E-19 T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Theam_1123 42495716103113d83c357bca88379165 215 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 12 35 1.2E-19 T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Theam_1123 42495716103113d83c357bca88379165 215 Gene3D G3DSA:1.20.950.20 1 196 5.5E-56 T 13-10-2018 Theam_1123 42495716103113d83c357bca88379165 215 SUPERFAMILY SSF81342 5 211 1.41E-36 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 SUPERFAMILY SSF55785 320 401 4.76E-8 T 13-10-2018 IPR035965 PAS domain superfamily Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 603 8.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 636 8.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 617 8.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 Pfam PF00672 HAMP domain 279 323 5.8E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 Gene3D G3DSA:1.20.1480.50 236 328 5.2E-12 T 13-10-2018 Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 Gene3D G3DSA:1.10.287.130 436 513 1.1E-14 T 13-10-2018 Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 558 645 8.4E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 SUPERFAMILY SSF47384 443 516 1.04E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 SMART SM00388 447 518 2.8E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 Gene3D G3DSA:3.30.450.20 329 435 2.0E-7 T 13-10-2018 Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 SMART SM00387 554 652 3.1E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 Pfam PF00512 His Kinase A (phospho-acceptor) domain 449 515 5.6E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 SMART SM00304 274 327 1.5E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 Gene3D G3DSA:3.30.565.10 518 652 8.2E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 PIRSF PIRSF037532 1 155 3.8E-8 T 13-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 PIRSF PIRSF037532 176 651 7.2E-121 T 13-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 SUPERFAMILY SSF55874 520 651 4.06E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 Pfam PF13188 PAS domain 335 395 2.4E-6 T 13-10-2018 IPR000014 PAS domain Theam_1040 15a455ac9da76a7657c7f1f7eefa15f5 652 SUPERFAMILY SSF158472 275 323 9.42E-9 T 13-10-2018 Theam_1260 88ec53a9593104b48ba09fb8115729e7 266 SUPERFAMILY SSF56300 1 252 4.55E-82 T 13-10-2018 Theam_1260 88ec53a9593104b48ba09fb8115729e7 266 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 253 1.0E-83 T 13-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Theam_1260 88ec53a9593104b48ba09fb8115729e7 266 PIRSF PIRSF004789 1 259 1.6E-91 T 13-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Theam_1260 88ec53a9593104b48ba09fb8115729e7 266 Pfam PF13277 YmdB-like protein 5 251 1.3E-99 T 13-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Theam_1260 88ec53a9593104b48ba09fb8115729e7 266 Gene3D G3DSA:3.60.21.10 1 254 4.7E-104 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Theam_0230 a062c0ae52ea30ef6cd344fbb17f7257 495 SUPERFAMILY SSF50475 3 317 5.1E-117 T 13-10-2018 Theam_0230 a062c0ae52ea30ef6cd344fbb17f7257 495 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 448 1.6E-151 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Theam_0230 a062c0ae52ea30ef6cd344fbb17f7257 495 Gene3D G3DSA:1.20.5.570 448 486 9.2E-8 T 13-10-2018 Theam_0230 a062c0ae52ea30ef6cd344fbb17f7257 495 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 423 6.5E-170 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Theam_0230 a062c0ae52ea30ef6cd344fbb17f7257 495 SUPERFAMILY SSF143968 318 481 8.63E-62 T 13-10-2018 Theam_0230 a062c0ae52ea30ef6cd344fbb17f7257 495 TIGRFAM TIGR03701 mena_SCO4490: menaquinone biosynthesis decarboxylase, SCO4490 family 8 440 2.1E-195 T 13-10-2018 IPR022390 4-hydroxybenzoate decarboxylase subunit C GO:0016831 Theam_0230 a062c0ae52ea30ef6cd344fbb17f7257 495 Gene3D G3DSA:3.40.1670.10 332 447 6.1E-39 T 13-10-2018 Theam_1711 527966f79e7f9dbaf512f8079dd683eb 82 Pfam PF04973 Nicotinamide mononucleotide transporter 10 75 5.8E-6 T 13-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 Theam_1383 332a2dc16b8dcc471804e6cac97d0a28 161 Pfam PF01850 PIN domain 30 145 1.3E-5 T 13-10-2018 IPR002716 PIN domain Theam_1383 332a2dc16b8dcc471804e6cac97d0a28 161 SUPERFAMILY SSF88723 1 154 9.25E-17 T 13-10-2018 IPR029060 PIN-like domain superfamily Theam_1383 332a2dc16b8dcc471804e6cac97d0a28 161 Gene3D G3DSA:3.40.50.1010 1 154 5.0E-18 T 13-10-2018 Theam_1365 c4197d070b58d7a55bfdea4375d2c8c0 631 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 587 1.0E-234 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Theam_1365 c4197d070b58d7a55bfdea4375d2c8c0 631 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 2 616 38.004 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Theam_1365 c4197d070b58d7a55bfdea4375d2c8c0 631 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 326 8.2E-47 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Theam_1365 c4197d070b58d7a55bfdea4375d2c8c0 631 ProSitePatterns PS00674 AAA-protein family signature. 296 314 - T 13-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Theam_1365 c4197d070b58d7a55bfdea4375d2c8c0 631 SMART SM00382 189 328 2.9E-26 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1365 c4197d070b58d7a55bfdea4375d2c8c0 631 Gene3D G3DSA:3.40.50.300 141 327 3.6E-74 T 13-10-2018 Theam_1365 c4197d070b58d7a55bfdea4375d2c8c0 631 Pfam PF06480 FtsH Extracellular 12 98 1.5E-14 T 13-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 Theam_1365 c4197d070b58d7a55bfdea4375d2c8c0 631 SUPERFAMILY SSF140990 407 592 5.36E-71 T 13-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Theam_1365 c4197d070b58d7a55bfdea4375d2c8c0 631 Gene3D G3DSA:1.20.58.760 402 597 7.2E-77 T 13-10-2018 Theam_1365 c4197d070b58d7a55bfdea4375d2c8c0 631 SUPERFAMILY SSF52540 149 396 1.94E-79 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1365 c4197d070b58d7a55bfdea4375d2c8c0 631 Pfam PF01434 Peptidase family M41 386 587 8.9E-79 T 13-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Theam_1365 c4197d070b58d7a55bfdea4375d2c8c0 631 Gene3D G3DSA:2.40.50.920 29 105 1.1E-8 T 13-10-2018 Theam_1365 c4197d070b58d7a55bfdea4375d2c8c0 631 Gene3D G3DSA:1.10.8.60 328 401 3.4E-34 T 13-10-2018 Theam_0143 61623bb79a9d7e02688f95287383029c 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 1.3E-37 T 13-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0143 61623bb79a9d7e02688f95287383029c 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 13-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0143 61623bb79a9d7e02688f95287383029c 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.2E-31 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0143 61623bb79a9d7e02688f95287383029c 102 SUPERFAMILY SSF141091 1 100 2.75E-33 T 13-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0143 61623bb79a9d7e02688f95287383029c 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 24.891 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0701 82f0331b17f2cbc1a32c79f19cc5bccc 372 PIRSF PIRSF004911 4 353 2.6E-101 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Theam_0701 82f0331b17f2cbc1a32c79f19cc5bccc 372 TIGRFAM TIGR00238 TIGR00238: KamA family protein 8 307 1.9E-73 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Theam_0701 82f0331b17f2cbc1a32c79f19cc5bccc 372 Pfam PF04055 Radical SAM superfamily 99 251 4.0E-9 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0701 82f0331b17f2cbc1a32c79f19cc5bccc 372 SUPERFAMILY SSF102114 85 308 1.96E-26 T 13-10-2018 Theam_0701 82f0331b17f2cbc1a32c79f19cc5bccc 372 Gene3D G3DSA:3.20.20.70 35 322 2.3E-93 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1591 f84eb9fee6f9199b513e7ee592e9e7eb 252 Gene3D G3DSA:1.10.1270.20 171 249 8.9E-28 T 13-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Theam_1591 f84eb9fee6f9199b513e7ee592e9e7eb 252 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 218 1.4E-69 T 13-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Theam_1591 f84eb9fee6f9199b513e7ee592e9e7eb 252 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 228 2.4E-87 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Theam_1591 f84eb9fee6f9199b513e7ee592e9e7eb 252 Gene3D G3DSA:3.40.1280.10 1 170 9.8E-70 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Theam_1591 f84eb9fee6f9199b513e7ee592e9e7eb 252 SUPERFAMILY SSF75217 2 235 1.05E-92 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Theam_1591 f84eb9fee6f9199b513e7ee592e9e7eb 252 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 252 104.788 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Theam_1591 f84eb9fee6f9199b513e7ee592e9e7eb 252 PIRSF PIRSF000386 1 249 1.5E-96 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Theam_1273 56604faead7ed7ffba4fed4953754981 566 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.7E-7 T 13-10-2018 Theam_1273 56604faead7ed7ffba4fed4953754981 566 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 349 371 3.7E-7 T 13-10-2018 Theam_1273 56604faead7ed7ffba4fed4953754981 566 Gene3D G3DSA:1.20.58.100 413 527 5.3E-39 T 13-10-2018 Theam_1273 56604faead7ed7ffba4fed4953754981 566 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 5 566 4.1E-255 T 13-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1273 56604faead7ed7ffba4fed4953754981 566 SUPERFAMILY SSF51905 2 408 4.12E-83 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1273 56604faead7ed7ffba4fed4953754981 566 PIRSF PIRSF000171 1 563 1.2E-57 T 13-10-2018 Theam_1273 56604faead7ed7ffba4fed4953754981 566 Gene3D G3DSA:4.10.80.40 528 562 1.6E-7 T 13-10-2018 Theam_1273 56604faead7ed7ffba4fed4953754981 566 SUPERFAMILY SSF46977 431 566 2.22E-48 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1273 56604faead7ed7ffba4fed4953754981 566 SUPERFAMILY SSF56425 226 346 1.03E-41 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1273 56604faead7ed7ffba4fed4953754981 566 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 3 564 1.0E-219 T 13-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1273 56604faead7ed7ffba4fed4953754981 566 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 40 49 - T 13-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1273 56604faead7ed7ffba4fed4953754981 566 Pfam PF00890 FAD binding domain 5 386 1.1E-116 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1273 56604faead7ed7ffba4fed4953754981 566 Pfam PF02910 Fumarate reductase flavoprotein C-term 440 566 4.1E-41 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1273 56604faead7ed7ffba4fed4953754981 566 Gene3D G3DSA:3.90.700.10 236 341 5.7E-162 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1273 56604faead7ed7ffba4fed4953754981 566 Gene3D G3DSA:3.50.50.60 5 397 5.7E-162 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0038 c992880339d4e1b93f9332d3743f15c6 97 PRINTS PR01727 Prokaryotic integration host factor signature 46 61 1.6E-10 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Theam_0038 c992880339d4e1b93f9332d3743f15c6 97 PRINTS PR01727 Prokaryotic integration host factor signature 64 77 1.6E-10 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Theam_0038 c992880339d4e1b93f9332d3743f15c6 97 PRINTS PR01727 Prokaryotic integration host factor signature 80 94 1.6E-10 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Theam_0038 c992880339d4e1b93f9332d3743f15c6 97 Pfam PF00216 Bacterial DNA-binding protein 1 91 4.2E-23 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Theam_0038 c992880339d4e1b93f9332d3743f15c6 97 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 52 71 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Theam_0038 c992880339d4e1b93f9332d3743f15c6 97 SUPERFAMILY SSF47729 1 92 1.13E-20 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Theam_0038 c992880339d4e1b93f9332d3743f15c6 97 Gene3D G3DSA:4.10.520.10 1 95 4.0E-25 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Theam_0038 c992880339d4e1b93f9332d3743f15c6 97 SMART SM00411 1 97 6.8E-18 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Theam_0746 8e082b6c2a49dbd4ae7a5cf782efe751 462 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 5 455 7.4E-186 T 13-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Theam_0746 8e082b6c2a49dbd4ae7a5cf782efe751 462 Pfam PF03841 L-seryl-tRNA selenium transferase 79 443 5.0E-160 T 13-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Theam_0746 8e082b6c2a49dbd4ae7a5cf782efe751 462 Gene3D G3DSA:3.40.640.10 91 355 2.1E-175 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Theam_0746 8e082b6c2a49dbd4ae7a5cf782efe751 462 Gene3D G3DSA:3.90.1150.110 7 448 2.1E-175 T 13-10-2018 Theam_0746 8e082b6c2a49dbd4ae7a5cf782efe751 462 Pfam PF12390 Selenocysteine synthase N terminal 5 44 9.6E-5 T 13-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Theam_0746 8e082b6c2a49dbd4ae7a5cf782efe751 462 SUPERFAMILY SSF53383 69 460 3.22E-52 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Theam_0746 8e082b6c2a49dbd4ae7a5cf782efe751 462 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 461 214.293 T 13-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Theam_1559 a5b659571cb4f6b936f9f000eb8cb414 255 Pfam PF00753 Metallo-beta-lactamase superfamily 38 227 8.6E-8 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_1559 a5b659571cb4f6b936f9f000eb8cb414 255 SMART SM00849 37 227 5.3E-16 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_1559 a5b659571cb4f6b936f9f000eb8cb414 255 Gene3D G3DSA:3.60.15.10 6 245 6.5E-35 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_1559 a5b659571cb4f6b936f9f000eb8cb414 255 SUPERFAMILY SSF56281 32 243 2.92E-29 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_1111 2b9ec621714c094f357136dfec444d42 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 38.026 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Theam_1111 2b9ec621714c094f357136dfec444d42 247 Pfam PF01709 Transcriptional regulator 5 237 4.1E-105 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Theam_1111 2b9ec621714c094f357136dfec444d42 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 237 2.3E-107 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Theam_1111 2b9ec621714c094f357136dfec444d42 247 Gene3D G3DSA:3.30.70.980 84 236 1.2E-61 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Theam_1111 2b9ec621714c094f357136dfec444d42 247 Gene3D G3DSA:1.10.10.200 1 79 1.4E-38 T 13-10-2018 IPR017856 Integrase-like, N-terminal Theam_1111 2b9ec621714c094f357136dfec444d42 247 SUPERFAMILY SSF75625 3 245 1.18E-102 T 13-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Theam_1111 2b9ec621714c094f357136dfec444d42 247 Gene3D G3DSA:3.30.70.980 133 205 1.2E-61 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 Pfam PF08264 Anticodon-binding domain of tRNA 607 754 1.5E-43 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 SUPERFAMILY SSF52374 2 574 2.96E-151 T 13-10-2018 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 Gene3D G3DSA:3.90.740.10 180 345 0.0 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 811 876 2.3E-18 T 13-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 Gene3D G3DSA:3.40.50.620 23 526 0.0 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 SUPERFAMILY SSF47323 577 826 5.23E-67 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 PRINTS PR00986 Valyl-tRNA synthetase signature 348 361 4.9E-38 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 PRINTS PR00986 Valyl-tRNA synthetase signature 477 495 4.9E-38 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 PRINTS PR00986 Valyl-tRNA synthetase signature 446 467 4.9E-38 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 PRINTS PR00986 Valyl-tRNA synthetase signature 41 52 4.9E-38 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 PRINTS PR00986 Valyl-tRNA synthetase signature 235 252 4.9E-38 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 Hamap MF_02004 Valine--tRNA ligase [valS]. 3 876 15.968 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 Gene3D G3DSA:1.10.730.10 4 741 0.0 T 13-10-2018 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 858 0.0 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 SUPERFAMILY SSF46589 811 875 3.35E-15 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 Gene3D G3DSA:1.10.287.380 806 876 2.2E-16 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 565 4.8E-216 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1676 6bd655dd07bc08d8be58534ebd638218 879 SUPERFAMILY SSF50677 195 344 3.14E-63 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Theam_1156 a1878969b36855645de573c129470d48 414 Gene3D G3DSA:1.10.760.10 130 398 7.9E-110 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Theam_1156 a1878969b36855645de573c129470d48 414 Gene3D G3DSA:1.10.760.10 270 397 7.9E-110 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Theam_1156 a1878969b36855645de573c129470d48 414 PIRSF PIRSF000294 14 65 47.0 T 13-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 Theam_1156 a1878969b36855645de573c129470d48 414 PIRSF PIRSF000294 87 414 2.6E-120 T 13-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 Theam_1156 a1878969b36855645de573c129470d48 414 SUPERFAMILY SSF46626 270 405 7.54E-34 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Theam_1156 a1878969b36855645de573c129470d48 414 Pfam PF00034 Cytochrome c 291 394 4.5E-6 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Theam_1156 a1878969b36855645de573c129470d48 414 SUPERFAMILY SSF46626 112 271 4.98E-54 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Theam_1156 a1878969b36855645de573c129470d48 414 Pfam PF03150 Di-haem cytochrome c peroxidase 134 283 2.8E-51 T 13-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 Theam_1127 878e0d7136919137b6a93e135bae7321 232 SUPERFAMILY SSF53335 4 219 5.06E-32 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_1127 878e0d7136919137b6a93e135bae7321 232 Pfam PF01209 ubiE/COQ5 methyltransferase family 3 227 1.0E-27 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Theam_1127 878e0d7136919137b6a93e135bae7321 232 Gene3D G3DSA:3.40.50.150 11 228 5.8E-38 T 13-10-2018 Theam_1705 61f4e707ed0b11323529c137e3d428c0 63 SUPERFAMILY SSF57783 26 59 2.72E-5 T 13-10-2018 Theam_1705 61f4e707ed0b11323529c137e3d428c0 63 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 25 59 1.4E-9 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Theam_1522 8a4106943997fc584e77d4d67b74b6e5 218 Gene3D G3DSA:3.40.50.300 3 218 6.9E-55 T 13-10-2018 Theam_1522 8a4106943997fc584e77d4d67b74b6e5 218 SMART SM00382 28 215 1.6E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1522 8a4106943997fc584e77d4d67b74b6e5 218 Pfam PF00005 ABC transporter 19 165 7.9E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_1522 8a4106943997fc584e77d4d67b74b6e5 218 SUPERFAMILY SSF52540 3 213 3.33E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0597 b1e241628b7c851753ecb20c5e8dce75 269 SUPERFAMILY SSF88713 15 241 1.38E-27 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Theam_0597 b1e241628b7c851753ecb20c5e8dce75 269 Gene3D G3DSA:3.20.20.370 1 263 2.5E-54 T 13-10-2018 Theam_0597 b1e241628b7c851753ecb20c5e8dce75 269 Pfam PF01522 Polysaccharide deacetylase 50 229 3.1E-19 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Theam_1682 c9327a7213bde43529131a43ca36435a 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 201 212 2.8E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Theam_1682 c9327a7213bde43529131a43ca36435a 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 228 241 2.8E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Theam_1682 c9327a7213bde43529131a43ca36435a 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 2.8E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Theam_1682 c9327a7213bde43529131a43ca36435a 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 2.8E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Theam_1682 c9327a7213bde43529131a43ca36435a 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 2.8E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Theam_1682 c9327a7213bde43529131a43ca36435a 878 Gene3D G3DSA:3.30.54.20 629 682 2.4E-51 T 13-10-2018 Theam_1682 c9327a7213bde43529131a43ca36435a 878 SUPERFAMILY SSF55681 3 247 1.14E-113 T 13-10-2018 Theam_1682 c9327a7213bde43529131a43ca36435a 878 Gene3D G3DSA:3.30.980.10 561 700 2.4E-51 T 13-10-2018 Theam_1682 c9327a7213bde43529131a43ca36435a 878 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 858 0.0 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Theam_1682 c9327a7213bde43529131a43ca36435a 878 Pfam PF02272 DHHA1 domain 737 873 1.5E-24 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Theam_1682 c9327a7213bde43529131a43ca36435a 878 SMART SM00863 658 701 1.9E-20 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Theam_1682 c9327a7213bde43529131a43ca36435a 878 Gene3D G3DSA:3.30.930.10 3 244 3.1E-118 T 13-10-2018 Theam_1682 c9327a7213bde43529131a43ca36435a 878 Gene3D G3DSA:2.40.30.130 482 557 3.0E-13 T 13-10-2018 Theam_1682 c9327a7213bde43529131a43ca36435a 878 SUPERFAMILY SSF55186 557 716 6.8E-55 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Theam_1682 c9327a7213bde43529131a43ca36435a 878 SUPERFAMILY SSF101353 248 464 2.35E-67 T 13-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Theam_1682 c9327a7213bde43529131a43ca36435a 878 Gene3D G3DSA:3.10.310.40 768 877 4.8E-31 T 13-10-2018 Theam_1682 c9327a7213bde43529131a43ca36435a 878 Pfam PF01411 tRNA synthetases class II (A) 8 561 5.3E-235 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Theam_1682 c9327a7213bde43529131a43ca36435a 878 SUPERFAMILY SSF50447 458 557 1.52E-18 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Theam_1682 c9327a7213bde43529131a43ca36435a 878 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 658 701 2.4E-17 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Theam_1682 c9327a7213bde43529131a43ca36435a 878 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 191.692 T 13-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Theam_0461 6bd03fcdf9175c0fc3324861d6a37e55 579 Gene3D G3DSA:3.40.50.1220 190 362 5.0E-64 T 13-10-2018 Theam_0461 6bd03fcdf9175c0fc3324861d6a37e55 579 SUPERFAMILY SSF52467 188 363 7.53E-64 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Theam_0461 6bd03fcdf9175c0fc3324861d6a37e55 579 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 432 451 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Theam_0461 6bd03fcdf9175c0fc3324861d6a37e55 579 SUPERFAMILY SSF52518 1 172 7.57E-61 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Theam_0461 6bd03fcdf9175c0fc3324861d6a37e55 579 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 330 8.3E-50 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Theam_0461 6bd03fcdf9175c0fc3324861d6a37e55 579 Gene3D G3DSA:3.40.50.970 1 180 3.9E-69 T 13-10-2018 Theam_0461 6bd03fcdf9175c0fc3324861d6a37e55 579 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 567 7.6E-254 T 13-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Theam_0461 6bd03fcdf9175c0fc3324861d6a37e55 579 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 544 2.2E-51 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Theam_0461 6bd03fcdf9175c0fc3324861d6a37e55 579 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 167 1.7E-54 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Theam_0461 6bd03fcdf9175c0fc3324861d6a37e55 579 SUPERFAMILY SSF52518 369 573 8.94E-73 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Theam_0461 6bd03fcdf9175c0fc3324861d6a37e55 579 Gene3D G3DSA:3.40.50.970 366 579 3.4E-72 T 13-10-2018 Theam_0177 733052af2a94d251ad1dd13ff0c9d0fe 334 SUPERFAMILY SSF102405 66 271 2.9E-41 T 13-10-2018 Theam_0177 733052af2a94d251ad1dd13ff0c9d0fe 334 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 58 271 8.0E-70 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Theam_0177 733052af2a94d251ad1dd13ff0c9d0fe 334 Pfam PF02481 DNA recombination-mediator protein A 57 262 4.4E-74 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Theam_0177 733052af2a94d251ad1dd13ff0c9d0fe 334 Gene3D G3DSA:3.40.50.450 1 273 4.0E-96 T 13-10-2018 Theam_1651 88858db7145f00f50d3582d052a1891c 134 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 134 18.139 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Theam_1651 88858db7145f00f50d3582d052a1891c 134 SUPERFAMILY SSF53098 1 131 9.1E-30 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Theam_1651 88858db7145f00f50d3582d052a1891c 134 SMART SM00732 1 103 1.2E-19 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Theam_1651 88858db7145f00f50d3582d052a1891c 134 Gene3D G3DSA:3.30.420.140 1 134 3.7E-34 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Theam_1651 88858db7145f00f50d3582d052a1891c 134 Pfam PF03652 Holliday junction resolvase 1 131 3.6E-33 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Theam_1651 88858db7145f00f50d3582d052a1891c 134 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 1 131 3.4E-22 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Theam_1302 c90818dd42577ef17dbd3984f59c76b8 162 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 119 7.4E-14 T 13-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase Theam_0903 af124271c5700615961d1d99981ea2cf 663 Gene3D G3DSA:3.55.50.30 227 335 3.9E-19 T 13-10-2018 Theam_0903 af124271c5700615961d1d99981ea2cf 663 Pfam PF03958 Bacterial type II/III secretion system short domain 337 399 5.7E-7 T 13-10-2018 IPR005644 NolW-like Theam_0903 af124271c5700615961d1d99981ea2cf 663 Pfam PF00263 Bacterial type II and III secretion system protein 490 653 3.4E-51 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Theam_0903 af124271c5700615961d1d99981ea2cf 663 PRINTS PR00811 Bacterial general secretion pathway protein D signature 618 636 5.3E-19 T 13-10-2018 IPR001775 GspD/PilQ family Theam_0903 af124271c5700615961d1d99981ea2cf 663 PRINTS PR00811 Bacterial general secretion pathway protein D signature 399 409 5.3E-19 T 13-10-2018 IPR001775 GspD/PilQ family Theam_0903 af124271c5700615961d1d99981ea2cf 663 PRINTS PR00811 Bacterial general secretion pathway protein D signature 641 655 5.3E-19 T 13-10-2018 IPR001775 GspD/PilQ family Theam_0903 af124271c5700615961d1d99981ea2cf 663 PRINTS PR00811 Bacterial general secretion pathway protein D signature 486 510 5.3E-19 T 13-10-2018 IPR001775 GspD/PilQ family Theam_0903 af124271c5700615961d1d99981ea2cf 663 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 248 653 1.8E-95 T 13-10-2018 IPR013355 Type IV pilus secretin PilQ Theam_0903 af124271c5700615961d1d99981ea2cf 663 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 599 632 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 Theam_0903 af124271c5700615961d1d99981ea2cf 663 Gene3D G3DSA:3.30.1370.120 336 396 4.3E-7 T 13-10-2018 IPR038591 NolW-like superfamily Theam_1140 b58313cd853a6e368141b32439c1348c 652 Pfam PF00905 Penicillin binding protein transpeptidase domain 318 427 8.0E-7 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Theam_1140 b58313cd853a6e368141b32439c1348c 652 Pfam PF00905 Penicillin binding protein transpeptidase domain 462 548 1.8E-10 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Theam_1140 b58313cd853a6e368141b32439c1348c 652 SUPERFAMILY SSF56601 200 616 1.62E-94 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Theam_1140 b58313cd853a6e368141b32439c1348c 652 SUPERFAMILY SSF53955 31 240 1.32E-76 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Theam_1140 b58313cd853a6e368141b32439c1348c 652 Gene3D G3DSA:1.10.3810.10 35 235 1.1E-77 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Theam_1140 b58313cd853a6e368141b32439c1348c 652 Gene3D G3DSA:3.40.710.10 241 613 4.7E-87 T 13-10-2018 Theam_1140 b58313cd853a6e368141b32439c1348c 652 Pfam PF00912 Transglycosylase 42 218 2.4E-61 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Theam_1140 b58313cd853a6e368141b32439c1348c 652 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 54 590 3.5E-158 T 13-10-2018 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 226 236 - T 13-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 Gene3D G3DSA:1.10.520.10 5 396 4.4E-172 T 13-10-2018 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 SUPERFAMILY SSF48113 23 396 2.36E-120 T 13-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 ProSitePatterns PS00436 Peroxidases active site signature. 61 72 - T 13-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 5 701 4.5E-299 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 Gene3D G3DSA:1.10.520.10 400 701 9.2E-119 T 13-10-2018 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 234 257 1.1E-35 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 38 63 1.1E-35 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 23 36 1.1E-35 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 446 472 1.1E-35 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 Pfam PF00141 Peroxidase 370 673 8.0E-29 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 Pfam PF00141 Peroxidase 49 362 8.4E-42 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 Gene3D G3DSA:1.10.420.20 162 364 4.4E-172 T 13-10-2018 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 Gene3D G3DSA:1.10.420.10 552 677 9.2E-119 T 13-10-2018 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 PRINTS PR00458 Haem peroxidase superfamily signature 606 621 1.9E-15 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 PRINTS PR00458 Haem peroxidase superfamily signature 226 241 1.9E-15 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 PRINTS PR00458 Haem peroxidase superfamily signature 61 75 1.9E-15 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 PRINTS PR00458 Haem peroxidase superfamily signature 121 138 1.9E-15 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 PRINTS PR00458 Haem peroxidase superfamily signature 139 151 1.9E-15 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Theam_0186 74e619aba3867e9286532f9dfd5459cb 704 SUPERFAMILY SSF48113 397 701 8.55E-86 T 13-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Theam_1256 1b76edbbd0233831229421b2b7a5f1fe 289 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 22 106 8.9E-26 T 13-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Theam_1256 1b76edbbd0233831229421b2b7a5f1fe 289 PIRSF PIRSF006250 3 280 7.6E-88 T 13-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Theam_1256 1b76edbbd0233831229421b2b7a5f1fe 289 Gene3D G3DSA:3.90.1170.20 13 275 1.1E-95 T 13-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Theam_1256 1b76edbbd0233831229421b2b7a5f1fe 289 Gene3D G3DSA:3.20.20.70 122 268 1.1E-95 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1256 1b76edbbd0233831229421b2b7a5f1fe 289 SUPERFAMILY SSF54675 3 107 1.37E-29 T 13-10-2018 Theam_1256 1b76edbbd0233831229421b2b7a5f1fe 289 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 108 276 5.8E-57 T 13-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Theam_1256 1b76edbbd0233831229421b2b7a5f1fe 289 SUPERFAMILY SSF51690 108 278 2.86E-51 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Theam_1256 1b76edbbd0233831229421b2b7a5f1fe 289 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 10 277 1.3E-91 T 13-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 176 1.1E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 SUPERFAMILY SSF54211 224 395 1.02E-60 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 SUPERFAMILY SSF55874 7 214 5.37E-77 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR00418 DNA topoisomerase II family signature 508 525 8.5E-73 T 13-10-2018 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR00418 DNA topoisomerase II family signature 115 129 8.5E-73 T 13-10-2018 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR00418 DNA topoisomerase II family signature 72 85 8.5E-73 T 13-10-2018 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 8.5E-73 T 13-10-2018 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR00418 DNA topoisomerase II family signature 424 438 8.5E-73 T 13-10-2018 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR00418 DNA topoisomerase II family signature 528 540 8.5E-73 T 13-10-2018 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR00418 DNA topoisomerase II family signature 271 284 8.5E-73 T 13-10-2018 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR00418 DNA topoisomerase II family signature 37 52 8.5E-73 T 13-10-2018 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR00418 DNA topoisomerase II family signature 490 506 8.5E-73 T 13-10-2018 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 SUPERFAMILY SSF56719 398 563 7.06E-68 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 732 793 1.4E-31 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 Pfam PF00204 DNA gyrase B 224 394 1.1E-63 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 SUPERFAMILY SSF56719 701 798 9.15E-21 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 5 804 98.471 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 Gene3D G3DSA:3.40.50.670 403 631 1.1E-77 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 Gene3D G3DSA:3.40.50.670 678 804 1.5E-30 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 SMART SM00433 37 797 0.0 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 SMART SM00387 33 177 5.7E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 426 434 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR01159 DNA gyrase subunit B signature 197 210 1.6E-75 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR01159 DNA gyrase subunit B signature 316 332 1.6E-75 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 1.6E-75 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR01159 DNA gyrase subunit B signature 8 18 1.6E-75 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR01159 DNA gyrase subunit B signature 182 197 1.6E-75 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR01159 DNA gyrase subunit B signature 223 245 1.6E-75 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR01159 DNA gyrase subunit B signature 378 398 1.6E-75 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR01159 DNA gyrase subunit B signature 474 483 1.6E-75 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR01159 DNA gyrase subunit B signature 364 378 1.6E-75 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 1.6E-75 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 Pfam PF01751 Toprim domain 423 534 1.4E-18 T 13-10-2018 IPR006171 TOPRIM domain Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 Gene3D G3DSA:3.30.565.10 4 222 1.5E-95 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 Gene3D G3DSA:3.30.230.10 223 402 1.9E-72 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Theam_1188 72fa6968fea02ec7c3cc453c667addab 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 8 804 0.0 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Theam_0593 67377b019355401a9af311b36f8c012f 214 Pfam PF02581 Thiamine monophosphate synthase 11 194 2.6E-60 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Theam_0593 67377b019355401a9af311b36f8c012f 214 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 11 205 1.7E-61 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Theam_0593 67377b019355401a9af311b36f8c012f 214 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 212 26.852 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Theam_0593 67377b019355401a9af311b36f8c012f 214 Gene3D G3DSA:3.20.20.70 9 212 1.2E-64 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0593 67377b019355401a9af311b36f8c012f 214 SUPERFAMILY SSF51391 9 210 8.37E-62 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Theam_0303 e850803840546c2b1f05a2fd89981181 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 65 146 3.1E-27 T 13-10-2018 IPR020069 Ribosomal protein L9, C-terminal Theam_0303 e850803840546c2b1f05a2fd89981181 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 2.9E-24 T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0303 e850803840546c2b1f05a2fd89981181 150 SUPERFAMILY SSF55653 56 147 2.62E-24 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Theam_0303 e850803840546c2b1f05a2fd89981181 150 SUPERFAMILY SSF55658 1 56 6.1E-19 T 13-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Theam_0303 e850803840546c2b1f05a2fd89981181 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.656 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0303 e850803840546c2b1f05a2fd89981181 150 Gene3D G3DSA:3.10.430.100 61 147 8.1E-28 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Theam_0303 e850803840546c2b1f05a2fd89981181 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 3.4E-46 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0303 e850803840546c2b1f05a2fd89981181 150 Gene3D G3DSA:3.40.5.10 1 49 1.4E-24 T 13-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0303 e850803840546c2b1f05a2fd89981181 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0349 b8717eb477af53cad4accf39d5508da5 338 PIRSF PIRSF000148 3 338 5.2E-143 T 13-10-2018 Theam_0349 b8717eb477af53cad4accf39d5508da5 338 Gene3D G3DSA:3.40.50.720 6 330 1.8E-153 T 13-10-2018 Theam_0349 b8717eb477af53cad4accf39d5508da5 338 SUPERFAMILY SSF55347 128 320 2.77E-80 T 13-10-2018 Theam_0349 b8717eb477af53cad4accf39d5508da5 338 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 138 319 4.6E-61 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Theam_0349 b8717eb477af53cad4accf39d5508da5 338 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 118 6.9E-37 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Theam_0349 b8717eb477af53cad4accf39d5508da5 338 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 333 39.957 T 13-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Theam_0349 b8717eb477af53cad4accf39d5508da5 338 SUPERFAMILY SSF51735 4 156 6.42E-56 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0349 b8717eb477af53cad4accf39d5508da5 338 Gene3D G3DSA:3.30.360.10 127 316 1.8E-153 T 13-10-2018 Theam_0349 b8717eb477af53cad4accf39d5508da5 338 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 4.2E-157 T 13-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Theam_0349 b8717eb477af53cad4accf39d5508da5 338 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 230 244 - T 13-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Theam_0349 b8717eb477af53cad4accf39d5508da5 338 SMART SM00859 5 120 9.1E-52 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Theam_0483 ef93a639ca40d9f4bdd2ed1cefd39572 161 Pfam PF00027 Cyclic nucleotide-binding domain 31 115 5.3E-11 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Theam_0483 ef93a639ca40d9f4bdd2ed1cefd39572 161 SUPERFAMILY SSF51206 6 133 6.94E-26 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Theam_0483 ef93a639ca40d9f4bdd2ed1cefd39572 161 SMART SM00100 12 133 4.9E-7 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Theam_0483 ef93a639ca40d9f4bdd2ed1cefd39572 161 Gene3D G3DSA:2.60.120.10 2 147 2.1E-27 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Theam_1535 f69f586bb83e3c742bd5d5b3ffcc5288 210 Gene3D G3DSA:3.30.70.240 120 188 1.3E-11 T 13-10-2018 Theam_1535 f69f586bb83e3c742bd5d5b3ffcc5288 210 Gene3D G3DSA:3.30.70.240 1 67 1.6E-19 T 13-10-2018 Theam_1535 f69f586bb83e3c742bd5d5b3ffcc5288 210 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 122 204 10.639 T 13-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Theam_1535 f69f586bb83e3c742bd5d5b3ffcc5288 210 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 3 71 7.7E-10 T 13-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Theam_1535 f69f586bb83e3c742bd5d5b3ffcc5288 210 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 124 200 1.6E-8 T 13-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Theam_1535 f69f586bb83e3c742bd5d5b3ffcc5288 210 Pfam PF09827 CRISPR associated protein Cas2 124 195 3.3E-7 T 13-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Theam_1535 f69f586bb83e3c742bd5d5b3ffcc5288 210 Pfam PF09827 CRISPR associated protein Cas2 2 72 3.6E-15 T 13-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Theam_1535 f69f586bb83e3c742bd5d5b3ffcc5288 210 SUPERFAMILY SSF143430 123 200 8.89E-10 T 13-10-2018 Theam_1535 f69f586bb83e3c742bd5d5b3ffcc5288 210 SUPERFAMILY SSF143430 2 75 1.23E-16 T 13-10-2018 Theam_1535 f69f586bb83e3c742bd5d5b3ffcc5288 210 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 90 12.567 T 13-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Theam_0939 bd1a98f70b3cba7dfd262ac34162a1f0 689 Gene3D G3DSA:1.10.3430.10 1 320 1.5E-56 T 13-10-2018 IPR029020 Ammonium/urea transporter Theam_0939 bd1a98f70b3cba7dfd262ac34162a1f0 689 Pfam PF03253 Urea transporter 10 294 3.2E-55 T 13-10-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 Theam_0939 bd1a98f70b3cba7dfd262ac34162a1f0 689 Gene3D G3DSA:2.70.70.10 332 482 6.5E-28 T 13-10-2018 IPR011055 Duplicated hybrid motif Theam_0939 bd1a98f70b3cba7dfd262ac34162a1f0 689 SUPERFAMILY SSF51261 384 474 4.81E-16 T 13-10-2018 IPR011055 Duplicated hybrid motif Theam_0939 bd1a98f70b3cba7dfd262ac34162a1f0 689 Pfam PF01551 Peptidase family M23 385 475 4.0E-13 T 13-10-2018 IPR016047 Peptidase M23 Theam_0820 78b99bd789a7bb24decc4d08026753a3 556 Pfam PF02355 Protein export membrane protein 377 545 4.7E-22 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Theam_0820 78b99bd789a7bb24decc4d08026753a3 556 Gene3D G3DSA:3.30.70.3220 110 206 5.9E-21 T 13-10-2018 Theam_0820 78b99bd789a7bb24decc4d08026753a3 556 PRINTS PR00702 Acriflavin resistance protein family signature 520 543 1.3E-8 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0820 78b99bd789a7bb24decc4d08026753a3 556 PRINTS PR00702 Acriflavin resistance protein family signature 392 415 1.3E-8 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0820 78b99bd789a7bb24decc4d08026753a3 556 PRINTS PR00702 Acriflavin resistance protein family signature 445 469 1.3E-8 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0820 78b99bd789a7bb24decc4d08026753a3 556 Pfam PF07549 SecD/SecF GG Motif 23 46 5.0E-8 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Theam_0820 78b99bd789a7bb24decc4d08026753a3 556 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 555 47.141 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Theam_0820 78b99bd789a7bb24decc4d08026753a3 556 Gene3D G3DSA:1.20.1640.10 368 553 5.6E-14 T 13-10-2018 Theam_0820 78b99bd789a7bb24decc4d08026753a3 556 SUPERFAMILY SSF82866 292 551 6.54E-49 T 13-10-2018 Theam_0820 78b99bd789a7bb24decc4d08026753a3 556 Gene3D G3DSA:3.30.1360.200 234 367 6.7E-35 T 13-10-2018 Theam_0820 78b99bd789a7bb24decc4d08026753a3 556 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 307 536 8.4E-87 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Theam_0820 78b99bd789a7bb24decc4d08026753a3 556 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 29 543 3.0E-149 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Theam_0969 ba9fa14327e7faabdeab1dc3d7b3249b 370 Gene3D G3DSA:3.20.20.70 10 359 3.4E-52 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0969 ba9fa14327e7faabdeab1dc3d7b3249b 370 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 19 369 49.683 T 13-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 Theam_0969 ba9fa14327e7faabdeab1dc3d7b3249b 370 SUPERFAMILY SSF102114 29 358 1.44E-45 T 13-10-2018 Theam_0969 ba9fa14327e7faabdeab1dc3d7b3249b 370 PIRSF PIRSF004762 8 370 4.6E-111 T 13-10-2018 Theam_0969 ba9fa14327e7faabdeab1dc3d7b3249b 370 SMART SM00729 68 291 7.8E-4 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_0969 ba9fa14327e7faabdeab1dc3d7b3249b 370 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 64 366 6.6E-110 T 13-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 Theam_0969 ba9fa14327e7faabdeab1dc3d7b3249b 370 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 21 366 2.5E-138 T 13-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 Theam_0969 ba9fa14327e7faabdeab1dc3d7b3249b 370 Pfam PF04055 Radical SAM superfamily 72 241 1.3E-13 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 Pfam PF13432 Tetratricopeptide repeat 91 151 2.9E-7 T 13-10-2018 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 Pfam PF13432 Tetratricopeptide repeat 158 217 5.8E-10 T 13-10-2018 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 Gene3D G3DSA:1.25.40.10 393 455 1.4E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 Gene3D G3DSA:1.25.40.10 456 579 1.2E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 Gene3D G3DSA:1.25.40.10 155 281 1.8E-27 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 Pfam PF13181 Tetratricopeptide repeat 428 455 0.047 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 SMART SM00028 322 355 3.0E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 SMART SM00028 254 287 0.74 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 SMART SM00028 423 456 0.28 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 SMART SM00028 85 118 10.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 SMART SM00028 51 84 0.27 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 SMART SM00028 186 219 0.04 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 SMART SM00028 525 558 310.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 SMART SM00028 356 389 11.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 SMART SM00028 491 524 0.0062 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 SMART SM00028 152 185 0.14 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 SMART SM00028 220 253 0.18 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 473 550 1.3E-9 T 13-10-2018 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 SUPERFAMILY SSF48452 48 116 7.44E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 Gene3D G3DSA:1.25.40.10 45 154 8.0E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 SUPERFAMILY SSF48452 101 289 1.85E-31 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 Gene3D G3DSA:1.25.40.10 282 392 4.4E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 SUPERFAMILY SSF48452 392 553 3.8E-25 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 SUPERFAMILY SSF48452 251 454 1.26E-32 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 Pfam PF14559 Tetratricopeptide repeat 235 287 7.5E-7 T 13-10-2018 Theam_0161 7aae37ddb2f6c27e105f3836373ec6a6 583 Pfam PF14559 Tetratricopeptide repeat 335 391 1.1E-5 T 13-10-2018 Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 345 37.59 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 328 2.2E-126 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 SMART SM00864 13 205 2.3E-108 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 Gene3D G3DSA:3.40.50.1440 5 220 4.7E-81 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 172 4.8E-43 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 SUPERFAMILY SSF52490 13 205 4.84E-69 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 PRINTS PR00423 Cell division protein FtsZ signature 126 147 3.9E-48 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 PRINTS PR00423 Cell division protein FtsZ signature 189 211 3.9E-48 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 PRINTS PR00423 Cell division protein FtsZ signature 98 118 3.9E-48 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 PRINTS PR00423 Cell division protein FtsZ signature 212 233 3.9E-48 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 Gene3D G3DSA:3.30.1330.20 221 335 5.3E-34 T 13-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 SUPERFAMILY SSF55307 204 320 3.2E-37 T 13-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 Pfam PF12327 FtsZ family, C-terminal domain 222 318 1.8E-27 T 13-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 SMART SM00865 207 326 1.1E-44 T 13-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Theam_0954 cffa8eb72dd152ea13e2f2986d7b22e7 362 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Theam_1320 47b5863ba3754192f61145b914d6c3b8 291 Gene3D G3DSA:3.30.420.40 7 282 2.1E-62 T 13-10-2018 Theam_1320 47b5863ba3754192f61145b914d6c3b8 291 SUPERFAMILY SSF53067 127 284 1.37E-27 T 13-10-2018 Theam_1320 47b5863ba3754192f61145b914d6c3b8 291 Gene3D G3DSA:3.30.420.150 107 274 2.1E-62 T 13-10-2018 Theam_1320 47b5863ba3754192f61145b914d6c3b8 291 Pfam PF02541 Ppx/GppA phosphatase family 20 284 7.3E-39 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Theam_1320 47b5863ba3754192f61145b914d6c3b8 291 SUPERFAMILY SSF53067 6 120 1.78E-24 T 13-10-2018 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 Gene3D G3DSA:1.10.287.610 32 103 9.4E-26 T 13-10-2018 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 Pfam PF14520 Helix-hairpin-helix domain 480 533 9.6E-5 T 13-10-2018 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 Gene3D G3DSA:1.10.150.20 538 619 6.1E-28 T 13-10-2018 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 358 434 2.8E-32 T 13-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 Hamap MF_01588 DNA ligase [ligA]. 35 703 49.361 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 Pfam PF12826 Helix-hairpin-helix motif 545 606 1.8E-24 T 13-10-2018 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 SMART SM00292 629 706 3.1E-14 T 13-10-2018 IPR001357 BRCT domain Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 44 699 2.0E-244 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 SUPERFAMILY SSF50249 354 436 2.4E-27 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 PIRSF PIRSF001604 28 708 6.2E-246 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 443 469 3.8E-9 T 13-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 Gene3D G3DSA:3.30.470.90 104 353 3.6E-89 T 13-10-2018 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 SMART SM00532 36 483 2.0E-235 T 13-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 147 176 - T 13-10-2018 IPR018239 NAD-dependent DNA ligase, active site Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 Gene3D G3DSA:1.10.150.20 467 537 2.8E-19 T 13-10-2018 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 Gene3D G3DSA:3.40.50.10190 626 709 1.2E-26 T 13-10-2018 IPR036420 BRCT domain superfamily Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 36 354 5.5E-118 T 13-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 Gene3D G3DSA:2.20.70.80 427 464 2.7E-10 T 13-10-2018 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 629 703 3.5E-15 T 13-10-2018 IPR001357 BRCT domain Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 Gene3D G3DSA:2.40.50.140 354 425 1.5E-30 T 13-10-2018 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 SUPERFAMILY SSF56091 32 352 3.96E-106 T 13-10-2018 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 SUPERFAMILY SSF47781 440 616 1.11E-55 T 13-10-2018 IPR010994 RuvA domain 2-like Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 367 382 - T 13-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 SMART SM00278 577 596 7.9 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 SMART SM00278 479 498 200.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 SMART SM00278 545 564 140.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 SMART SM00278 513 532 1300.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Theam_0873 2ec358d71dcbfb2ba9e49382f9634385 723 SUPERFAMILY SSF52113 629 707 1.59E-18 T 13-10-2018 IPR036420 BRCT domain superfamily Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 289 307 1.2E-19 T 13-10-2018 Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 390 406 1.2E-19 T 13-10-2018 Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 168 1.2E-19 T 13-10-2018 Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 419 441 1.2E-19 T 13-10-2018 Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 Gene3D G3DSA:1.10.1060.10 2 145 2.8E-35 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 454 3.3E-44 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 170 4.9E-16 T 13-10-2018 Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 289 314 4.9E-16 T 13-10-2018 Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 391 405 4.9E-16 T 13-10-2018 Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 441 4.9E-16 T 13-10-2018 Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 SUPERFAMILY SSF46548 8 157 8.37E-31 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 SUPERFAMILY SSF51971 145 399 5.59E-69 T 13-10-2018 Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 18 465 2.9E-159 T 13-10-2018 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 23 133 2.7E-37 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 Gene3D G3DSA:3.50.50.60 285 473 1.2E-28 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1343 ae8ec268932902465b7ebf58ca761c1c 475 Gene3D G3DSA:3.50.50.60 146 273 5.4E-38 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1646 08f3440e263192cc25df836dda699ec0 280 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 205 278 9.4E-15 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 Theam_1646 08f3440e263192cc25df836dda699ec0 280 PRINTS PR01374 Gram-negative bacterial tonB protein signature 90 100 1.0E-6 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Theam_1646 08f3440e263192cc25df836dda699ec0 280 PRINTS PR01374 Gram-negative bacterial tonB protein signature 200 221 1.0E-6 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Theam_1646 08f3440e263192cc25df836dda699ec0 280 PRINTS PR01374 Gram-negative bacterial tonB protein signature 221 239 1.0E-6 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Theam_1646 08f3440e263192cc25df836dda699ec0 280 Gene3D G3DSA:3.30.1150.10 139 279 1.2E-19 T 13-10-2018 Theam_1646 08f3440e263192cc25df836dda699ec0 280 SUPERFAMILY SSF74653 181 279 6.54E-17 T 13-10-2018 Theam_1646 08f3440e263192cc25df836dda699ec0 280 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 207 277 1.8E-12 T 13-10-2018 IPR006260 TonB/TolA, C-terminal Theam_0244 0230fe45abd0a83d2c1de8711dcd905a 316 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 91 110 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Theam_0244 0230fe45abd0a83d2c1de8711dcd905a 316 Gene3D G3DSA:3.20.20.70 3 244 9.0E-73 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0244 0230fe45abd0a83d2c1de8711dcd905a 316 PIRSF PIRSF006621 1 315 1.3E-76 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Theam_0244 0230fe45abd0a83d2c1de8711dcd905a 316 SUPERFAMILY SSF51395 9 307 1.15E-67 T 13-10-2018 Theam_0244 0230fe45abd0a83d2c1de8711dcd905a 316 Pfam PF01207 Dihydrouridine synthase (Dus) 10 310 5.2E-65 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Theam_0323 1e724900559b9fd8101a4b400e08c193 220 Gene3D G3DSA:3.40.50.2020 6 203 4.0E-53 T 13-10-2018 Theam_0323 1e724900559b9fd8101a4b400e08c193 220 SUPERFAMILY SSF53271 5 208 3.83E-29 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Theam_0323 1e724900559b9fd8101a4b400e08c193 220 Gene3D G3DSA:3.30.1310.20 54 114 4.0E-53 T 13-10-2018 Theam_0323 1e724900559b9fd8101a4b400e08c193 220 Pfam PF00156 Phosphoribosyl transferase domain 25 194 1.9E-10 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Theam_1790 1f778e1c7bc6ee3c832b5a48eb54436c 570 Gene3D G3DSA:3.55.50.30 126 226 1.6E-8 T 13-10-2018 Theam_1790 1f778e1c7bc6ee3c832b5a48eb54436c 570 Pfam PF00263 Bacterial type II and III secretion system protein 400 567 7.1E-18 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Theam_1790 1f778e1c7bc6ee3c832b5a48eb54436c 570 Pfam PF07655 Secretin N-terminal domain 229 304 5.2E-6 T 13-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 Theam_0094 6b0c60a1deda70ac749a1d0b95de7131 220 Pfam PF01209 ubiE/COQ5 methyltransferase family 9 215 2.4E-36 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Theam_0094 6b0c60a1deda70ac749a1d0b95de7131 220 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 220 28.371 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Theam_0094 6b0c60a1deda70ac749a1d0b95de7131 220 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 129 143 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Theam_0094 6b0c60a1deda70ac749a1d0b95de7131 220 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 9 217 3.3E-48 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Theam_0094 6b0c60a1deda70ac749a1d0b95de7131 220 SUPERFAMILY SSF53335 9 211 1.99E-35 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_0094 6b0c60a1deda70ac749a1d0b95de7131 220 Gene3D G3DSA:3.40.50.150 13 218 4.4E-45 T 13-10-2018 Theam_0651 b2fa993b987bf890e529f0f5ddfc982f 874 SUPERFAMILY SSF81301 29 155 3.76E-14 T 13-10-2018 Theam_0651 b2fa993b987bf890e529f0f5ddfc982f 874 SUPERFAMILY SSF109604 407 536 1.29E-16 T 13-10-2018 Theam_0651 b2fa993b987bf890e529f0f5ddfc982f 874 Pfam PF01966 HD domain 445 543 6.2E-12 T 13-10-2018 IPR006674 HD domain Theam_0651 b2fa993b987bf890e529f0f5ddfc982f 874 Gene3D G3DSA:1.10.3210.10 426 577 7.7E-10 T 13-10-2018 Theam_0651 b2fa993b987bf890e529f0f5ddfc982f 874 SUPERFAMILY SSF55021 797 855 5.34E-6 T 13-10-2018 Theam_0651 b2fa993b987bf890e529f0f5ddfc982f 874 SUPERFAMILY SSF81593 163 277 6.91E-8 T 13-10-2018 Theam_0651 b2fa993b987bf890e529f0f5ddfc982f 874 Pfam PF08335 GlnD PII-uridylyltransferase 170 299 2.5E-23 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Theam_0651 b2fa993b987bf890e529f0f5ddfc982f 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 162.931 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Theam_0651 b2fa993b987bf890e529f0f5ddfc982f 874 SMART SM00471 438 589 2.3E-5 T 13-10-2018 IPR003607 HD/PDEase domain Theam_0651 b2fa993b987bf890e529f0f5ddfc982f 874 PIRSF PIRSF006288 2 874 4.5E-210 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Theam_0651 b2fa993b987bf890e529f0f5ddfc982f 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 16 870 1.3E-194 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Theam_0651 b2fa993b987bf890e529f0f5ddfc982f 874 Pfam PF03445 Putative nucleotidyltransferase DUF294 36 111 1.2E-5 T 13-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 Theam_1634 44d2e517e150547689d8f476f9b626d7 431 Gene3D G3DSA:2.40.50.140 368 430 3.4E-8 T 13-10-2018 Theam_1634 44d2e517e150547689d8f476f9b626d7 431 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 4 421 3.4E-138 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Theam_1634 44d2e517e150547689d8f476f9b626d7 431 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 140 160 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Theam_1634 44d2e517e150547689d8f476f9b626d7 431 SMART SM00729 136 353 7.8E-48 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_1634 44d2e517e150547689d8f476f9b626d7 431 Gene3D G3DSA:3.80.30.20 135 366 2.6E-78 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Theam_1634 44d2e517e150547689d8f476f9b626d7 431 Gene3D G3DSA:3.40.50.12160 3 133 2.0E-40 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Theam_1634 44d2e517e150547689d8f476f9b626d7 431 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 421 1.9E-117 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Theam_1634 44d2e517e150547689d8f476f9b626d7 431 SUPERFAMILY SSF102114 123 356 1.57E-54 T 13-10-2018 Theam_1634 44d2e517e150547689d8f476f9b626d7 431 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 3 430 58.876 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Theam_1634 44d2e517e150547689d8f476f9b626d7 431 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 4.5E-27 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Theam_1634 44d2e517e150547689d8f476f9b626d7 431 Pfam PF04055 Radical SAM superfamily 142 311 2.8E-25 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0726 8539a560eba1ab28525a675e3ad7b779 274 SMART SM00363 17 77 0.0079 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0726 8539a560eba1ab28525a675e3ad7b779 274 SUPERFAMILY SSF55120 70 271 5.14E-45 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0726 8539a560eba1ab28525a675e3ad7b779 274 Gene3D G3DSA:3.10.290.10 9 69 8.8E-6 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Theam_0726 8539a560eba1ab28525a675e3ad7b779 274 SUPERFAMILY SSF55174 25 64 5.76E-6 T 13-10-2018 Theam_0726 8539a560eba1ab28525a675e3ad7b779 274 Pfam PF00849 RNA pseudouridylate synthase 86 211 7.9E-24 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0726 8539a560eba1ab28525a675e3ad7b779 274 Gene3D G3DSA:3.30.2350.10 77 274 3.5E-46 T 13-10-2018 Theam_1629 ca0ed1d1b7dbf26cf9c05c3b84594768 290 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 1.2E-65 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1629 ca0ed1d1b7dbf26cf9c05c3b84594768 290 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 1.2E-65 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1629 ca0ed1d1b7dbf26cf9c05c3b84594768 290 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 1.2E-65 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1629 ca0ed1d1b7dbf26cf9c05c3b84594768 290 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 1.2E-65 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1629 ca0ed1d1b7dbf26cf9c05c3b84594768 290 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 1.2E-65 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1629 ca0ed1d1b7dbf26cf9c05c3b84594768 290 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 1.2E-65 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1629 ca0ed1d1b7dbf26cf9c05c3b84594768 290 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 58.863 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1629 ca0ed1d1b7dbf26cf9c05c3b84594768 290 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 279 1.7E-150 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1629 ca0ed1d1b7dbf26cf9c05c3b84594768 290 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 2 283 1.6E-147 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Theam_1629 ca0ed1d1b7dbf26cf9c05c3b84594768 290 SUPERFAMILY SSF55681 2 280 1.19E-131 T 13-10-2018 Theam_1629 ca0ed1d1b7dbf26cf9c05c3b84594768 290 Gene3D G3DSA:1.20.58.180 205 283 5.9E-34 T 13-10-2018 Theam_1629 ca0ed1d1b7dbf26cf9c05c3b84594768 290 Gene3D G3DSA:3.30.930.10 1 204 6.6E-110 T 13-10-2018 Theam_0879 47c5a1ca5c602e91acecf149ee961288 129 Gene3D G3DSA:2.170.150.20 2 129 5.4E-46 T 13-10-2018 Theam_0879 47c5a1ca5c602e91acecf149ee961288 129 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 10 125 1.1E-34 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Theam_0879 47c5a1ca5c602e91acecf149ee961288 129 SUPERFAMILY SSF51316 9 125 3.66E-46 T 13-10-2018 IPR011057 Mss4-like superfamily Theam_0879 47c5a1ca5c602e91acecf149ee961288 129 Pfam PF01641 SelR domain 9 123 4.0E-41 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 Gene3D G3DSA:3.20.20.10 40 282 3.5E-155 T 13-10-2018 IPR029066 PLP-binding barrel Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 SUPERFAMILY SSF50621 264 418 1.67E-57 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 21 419 42.826 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 12 418 9.9E-159 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 SUPERFAMILY SSF51419 33 289 1.41E-80 T 13-10-2018 IPR029066 PLP-binding barrel Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 63 81 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 232 247 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 277 296 5.1E-24 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 5.1E-24 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 196 209 5.1E-24 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 5.1E-24 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 5.1E-24 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 36 376 9.4E-29 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 47 287 3.4E-67 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 305 323 2.3E-29 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 2.3E-29 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 170 179 2.3E-29 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 81 98 2.3E-29 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Theam_0631 b9131e3223751fc0b2ee450b4f8c6396 419 Gene3D G3DSA:2.40.37.10 19 416 3.5E-155 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Theam_1452 4cc2ac27fb2fd0f48aaa3b24e99acf35 135 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 1.3E-48 T 13-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 Theam_1452 4cc2ac27fb2fd0f48aaa3b24e99acf35 135 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 88 130 1.1E-9 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Theam_1452 4cc2ac27fb2fd0f48aaa3b24e99acf35 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 12 32 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Theam_1452 4cc2ac27fb2fd0f48aaa3b24e99acf35 135 Pfam PF00460 Flagella basal body rod protein 6 31 1.7E-7 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Theam_0548 a21b8170d0a539f672139b6cbb677f14 631 Pfam PF00501 AMP-binding enzyme 87 521 6.8E-102 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Theam_0548 a21b8170d0a539f672139b6cbb677f14 631 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 27 631 9.9E-277 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Theam_0548 a21b8170d0a539f672139b6cbb677f14 631 Gene3D G3DSA:3.40.50.12780 53 515 6.6E-116 T 13-10-2018 Theam_0548 a21b8170d0a539f672139b6cbb677f14 631 Gene3D G3DSA:3.30.300.30 517 626 2.1E-29 T 13-10-2018 Theam_0548 a21b8170d0a539f672139b6cbb677f14 631 ProSitePatterns PS00455 Putative AMP-binding domain signature. 262 273 - T 13-10-2018 IPR020845 AMP-binding, conserved site Theam_0548 a21b8170d0a539f672139b6cbb677f14 631 Pfam PF13193 AMP-binding enzyme C-terminal domain 530 608 9.0E-29 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Theam_0548 a21b8170d0a539f672139b6cbb677f14 631 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 31 84 5.3E-19 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Theam_0548 a21b8170d0a539f672139b6cbb677f14 631 SUPERFAMILY SSF56801 26 621 8.9E-183 T 13-10-2018 Theam_0661 6c0686adcd6eba60e244935fc7e864fe 596 Pfam PF02938 GAD domain 318 411 4.2E-32 T 13-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Theam_0661 6c0686adcd6eba60e244935fc7e864fe 596 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 9 590 35.237 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Theam_0661 6c0686adcd6eba60e244935fc7e864fe 596 Gene3D G3DSA:2.40.50.140 3 114 2.4E-39 T 13-10-2018 Theam_0661 6c0686adcd6eba60e244935fc7e864fe 596 Gene3D G3DSA:3.30.930.10 127 587 1.4E-202 T 13-10-2018 Theam_0661 6c0686adcd6eba60e244935fc7e864fe 596 Gene3D G3DSA:3.30.1360.30 282 425 1.4E-202 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Theam_0661 6c0686adcd6eba60e244935fc7e864fe 596 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 8 589 1.7E-248 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Theam_0661 6c0686adcd6eba60e244935fc7e864fe 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 218 231 3.1E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_0661 6c0686adcd6eba60e244935fc7e864fe 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 201 213 3.1E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_0661 6c0686adcd6eba60e244935fc7e864fe 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 480 496 3.1E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_0661 6c0686adcd6eba60e244935fc7e864fe 596 PRINTS PR01042 Aspartyl-tRNA synthetase signature 524 538 3.1E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_0661 6c0686adcd6eba60e244935fc7e864fe 596 Pfam PF01336 OB-fold nucleic acid binding domain 26 111 3.1E-19 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Theam_0661 6c0686adcd6eba60e244935fc7e864fe 596 SUPERFAMILY SSF55681 121 590 1.65E-109 T 13-10-2018 Theam_0661 6c0686adcd6eba60e244935fc7e864fe 596 Pfam PF00152 tRNA synthetases class II (D, K and N) 128 564 2.3E-107 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_0661 6c0686adcd6eba60e244935fc7e864fe 596 SUPERFAMILY SSF50249 10 114 4.0E-34 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0661 6c0686adcd6eba60e244935fc7e864fe 596 SUPERFAMILY SSF55261 299 425 2.29E-43 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Theam_0509 28d6c78ab197bdba20a04d6bd5b5c2e8 249 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 13 232 30.217 T 13-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Theam_0509 28d6c78ab197bdba20a04d6bd5b5c2e8 249 ProSitePatterns PS01028 Dehydroquinase class I active site. 104 132 - T 13-10-2018 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Theam_0509 28d6c78ab197bdba20a04d6bd5b5c2e8 249 SUPERFAMILY SSF51569 5 230 1.83E-54 T 13-10-2018 Theam_0509 28d6c78ab197bdba20a04d6bd5b5c2e8 249 Pfam PF01487 Type I 3-dehydroquinase 16 228 9.7E-51 T 13-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Theam_0509 28d6c78ab197bdba20a04d6bd5b5c2e8 249 Gene3D G3DSA:3.20.20.70 13 234 1.6E-57 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0509 28d6c78ab197bdba20a04d6bd5b5c2e8 249 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 14 228 8.0E-49 T 13-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Theam_0179 177b681f27d5cbe4b5db35bf7fdb8feb 429 Pfam PF00709 Adenylosuccinate synthetase 5 423 8.1E-180 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Theam_0179 177b681f27d5cbe4b5db35bf7fdb8feb 429 Gene3D G3DSA:3.90.170.10 267 429 5.4E-72 T 13-10-2018 Theam_0179 177b681f27d5cbe4b5db35bf7fdb8feb 429 SMART SM00788 3 424 4.3E-265 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Theam_0179 177b681f27d5cbe4b5db35bf7fdb8feb 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 190.694 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Theam_0179 177b681f27d5cbe4b5db35bf7fdb8feb 429 Gene3D G3DSA:3.40.440.10 6 259 5.8E-97 T 13-10-2018 Theam_0179 177b681f27d5cbe4b5db35bf7fdb8feb 429 SUPERFAMILY SSF52540 1 428 4.04E-170 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0179 177b681f27d5cbe4b5db35bf7fdb8feb 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 424 5.1E-170 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Theam_0179 177b681f27d5cbe4b5db35bf7fdb8feb 429 Gene3D G3DSA:1.10.300.10 107 207 5.8E-97 T 13-10-2018 Theam_0179 177b681f27d5cbe4b5db35bf7fdb8feb 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 132 143 - T 13-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Theam_0179 177b681f27d5cbe4b5db35bf7fdb8feb 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 13-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Theam_0514 f410af592f56f5fb1b3c1ea6bdc29839 430 SUPERFAMILY SSF55205 5 428 2.09E-126 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Theam_0514 f410af592f56f5fb1b3c1ea6bdc29839 430 ProSitePatterns PS00104 EPSP synthase signature 1. 87 101 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Theam_0514 f410af592f56f5fb1b3c1ea6bdc29839 430 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 425 5.0E-118 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Theam_0514 f410af592f56f5fb1b3c1ea6bdc29839 430 ProSitePatterns PS00885 EPSP synthase signature 2. 342 360 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Theam_0514 f410af592f56f5fb1b3c1ea6bdc29839 430 Gene3D G3DSA:3.65.10.10 13 422 2.8E-147 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Theam_0514 f410af592f56f5fb1b3c1ea6bdc29839 430 PIRSF PIRSF000505 1 430 2.5E-114 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Theam_0514 f410af592f56f5fb1b3c1ea6bdc29839 430 Gene3D G3DSA:3.65.10.10 21 231 2.8E-147 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Theam_0514 f410af592f56f5fb1b3c1ea6bdc29839 430 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 9 430 31.912 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Theam_0514 f410af592f56f5fb1b3c1ea6bdc29839 430 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 13 429 3.3E-126 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Theam_0311 a9acdda636ce8dea2884bb6202800cd8 236 SMART SM00248 204 233 2200.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Theam_0311 a9acdda636ce8dea2884bb6202800cd8 236 SMART SM00248 71 100 1.2E-5 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Theam_0311 a9acdda636ce8dea2884bb6202800cd8 236 SMART SM00248 170 200 7.6E-6 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Theam_0311 a9acdda636ce8dea2884bb6202800cd8 236 SMART SM00248 104 133 9.3E-6 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Theam_0311 a9acdda636ce8dea2884bb6202800cd8 236 SMART SM00248 137 166 2.8E-6 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Theam_0311 a9acdda636ce8dea2884bb6202800cd8 236 PRINTS PR01415 Ankyrin repeat signature 105 120 2.4E-8 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Theam_0311 a9acdda636ce8dea2884bb6202800cd8 236 PRINTS PR01415 Ankyrin repeat signature 153 167 2.4E-8 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Theam_0311 a9acdda636ce8dea2884bb6202800cd8 236 Pfam PF13857 Ankyrin repeats (many copies) 157 212 3.0E-14 T 13-10-2018 Theam_0311 a9acdda636ce8dea2884bb6202800cd8 236 Gene3D G3DSA:1.25.40.20 15 141 1.6E-33 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Theam_0311 a9acdda636ce8dea2884bb6202800cd8 236 SUPERFAMILY SSF48403 43 224 8.96E-59 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Theam_0311 a9acdda636ce8dea2884bb6202800cd8 236 Gene3D G3DSA:1.25.40.960 142 173 6.3E-13 T 13-10-2018 Theam_0311 a9acdda636ce8dea2884bb6202800cd8 236 Gene3D G3DSA:1.25.40.960 174 232 5.2E-15 T 13-10-2018 Theam_0311 a9acdda636ce8dea2884bb6202800cd8 236 Pfam PF12796 Ankyrin repeats (3 copies) 49 135 4.5E-16 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain Theam_1321 02243b73597154ef3a33ebd7b491589d 443 Gene3D G3DSA:3.50.50.60 6 310 3.6E-68 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1321 02243b73597154ef3a33ebd7b491589d 443 SUPERFAMILY SSF55424 328 426 3.92E-5 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Theam_1321 02243b73597154ef3a33ebd7b491589d 443 SUPERFAMILY SSF51905 1 310 9.43E-42 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1321 02243b73597154ef3a33ebd7b491589d 443 Gene3D G3DSA:3.50.50.60 43 239 3.6E-68 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1321 02243b73597154ef3a33ebd7b491589d 443 Gene3D G3DSA:3.30.390.30 322 443 1.7E-7 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Theam_1321 02243b73597154ef3a33ebd7b491589d 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 3.8E-25 T 13-10-2018 Theam_1321 02243b73597154ef3a33ebd7b491589d 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 3.8E-25 T 13-10-2018 Theam_1321 02243b73597154ef3a33ebd7b491589d 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 98 116 3.8E-25 T 13-10-2018 Theam_1321 02243b73597154ef3a33ebd7b491589d 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.8E-25 T 13-10-2018 Theam_1321 02243b73597154ef3a33ebd7b491589d 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 3.8E-25 T 13-10-2018 Theam_1321 02243b73597154ef3a33ebd7b491589d 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 1.8E-11 T 13-10-2018 Theam_1321 02243b73597154ef3a33ebd7b491589d 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 1.8E-11 T 13-10-2018 Theam_1321 02243b73597154ef3a33ebd7b491589d 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.8E-11 T 13-10-2018 Theam_1321 02243b73597154ef3a33ebd7b491589d 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 169 1.8E-11 T 13-10-2018 Theam_1321 02243b73597154ef3a33ebd7b491589d 443 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 278 1.4E-46 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Theam_0797 e4f674443be8662191528588029eb2f1 439 Gene3D G3DSA:1.20.5.170 206 235 4.1E-15 T 13-10-2018 Theam_0797 e4f674443be8662191528588029eb2f1 439 SUPERFAMILY SSF52413 319 422 2.49E-18 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Theam_0797 e4f674443be8662191528588029eb2f1 439 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 322 396 9.5E-16 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Theam_0797 e4f674443be8662191528588029eb2f1 439 SUPERFAMILY SSF51735 6 195 4.68E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0797 e4f674443be8662191528588029eb2f1 439 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 6 188 1.2E-59 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Theam_0797 e4f674443be8662191528588029eb2f1 439 PIRSF PIRSF000124 5 439 4.9E-117 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Theam_0797 e4f674443be8662191528588029eb2f1 439 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 207 300 3.2E-25 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Theam_0797 e4f674443be8662191528588029eb2f1 439 Gene3D G3DSA:3.40.50.720 1 205 7.6E-70 T 13-10-2018 Theam_0797 e4f674443be8662191528588029eb2f1 439 Gene3D G3DSA:3.40.50.720 237 439 3.6E-51 T 13-10-2018 Theam_0797 e4f674443be8662191528588029eb2f1 439 SMART SM00984 321 424 2.4E-11 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Theam_0797 e4f674443be8662191528588029eb2f1 439 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 6 391 9.3E-121 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Theam_0797 e4f674443be8662191528588029eb2f1 439 SUPERFAMILY SSF48179 206 300 7.48E-25 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Theam_0797 e4f674443be8662191528588029eb2f1 439 PIRSF PIRSF500134 5 427 1.1E-109 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 Theam_0754 6d125328b747325ea18d565e2e003bae 389 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 183 388 7.0E-37 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Theam_0754 6d125328b747325ea18d565e2e003bae 389 SUPERFAMILY SSF111369 125 177 9.02E-7 T 13-10-2018 Theam_0754 6d125328b747325ea18d565e2e003bae 389 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 291 1.8E-12 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Theam_0754 6d125328b747325ea18d565e2e003bae 389 Gene3D G3DSA:1.10.287.470 93 212 2.7E-66 T 13-10-2018 Theam_0754 6d125328b747325ea18d565e2e003bae 389 SUPERFAMILY SSF111369 180 313 1.57E-9 T 13-10-2018 Theam_0754 6d125328b747325ea18d565e2e003bae 389 Gene3D G3DSA:2.40.30.170 48 316 2.7E-66 T 13-10-2018 Theam_0754 6d125328b747325ea18d565e2e003bae 389 Gene3D G3DSA:2.40.420.20 317 374 2.7E-66 T 13-10-2018 Theam_0754 6d125328b747325ea18d565e2e003bae 389 SUPERFAMILY SSF111369 50 114 6.02E-9 T 13-10-2018 Theam_0754 6d125328b747325ea18d565e2e003bae 389 Gene3D G3DSA:2.40.50.100 59 246 2.7E-66 T 13-10-2018 Theam_0297 a717fbba8912108992de3919a7e1a1f5 199 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 179 3.5E-42 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Theam_0297 a717fbba8912108992de3919a7e1a1f5 199 Pfam PF01386 Ribosomal L25p family 7 90 1.9E-21 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Theam_0297 a717fbba8912108992de3919a7e1a1f5 199 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 4 91 8.0E-10 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Theam_0297 a717fbba8912108992de3919a7e1a1f5 199 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 182 26.244 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Theam_0297 a717fbba8912108992de3919a7e1a1f5 199 Gene3D G3DSA:2.170.120.20 95 190 9.4E-28 T 13-10-2018 IPR037121 Ribosomal protein L25, C-terminal Theam_0297 a717fbba8912108992de3919a7e1a1f5 199 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 181 8.7E-26 T 13-10-2018 IPR020057 Ribosomal protein L25, beta domain Theam_0297 a717fbba8912108992de3919a7e1a1f5 199 Gene3D G3DSA:2.40.240.10 2 93 6.4E-20 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Theam_0297 a717fbba8912108992de3919a7e1a1f5 199 SUPERFAMILY SSF50715 11 181 4.19E-49 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Theam_1372 c83c92386f879a3c3fdd63d8bb41a003 743 SUPERFAMILY SSF55326 394 565 2.36E-58 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Theam_1372 c83c92386f879a3c3fdd63d8bb41a003 743 Gene3D G3DSA:3.30.1330.10 383 560 1.0E-62 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Theam_1372 c83c92386f879a3c3fdd63d8bb41a003 743 Gene3D G3DSA:3.30.1330.10 36 187 5.0E-134 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Theam_1372 c83c92386f879a3c3fdd63d8bb41a003 743 SUPERFAMILY SSF55326 8 189 1.35E-50 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Theam_1372 c83c92386f879a3c3fdd63d8bb41a003 743 Pfam PF02769 AIR synthase related protein, C-terminal domain 196 350 1.7E-34 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Theam_1372 c83c92386f879a3c3fdd63d8bb41a003 743 Pfam PF02769 AIR synthase related protein, C-terminal domain 570 710 2.9E-20 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Theam_1372 c83c92386f879a3c3fdd63d8bb41a003 743 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 743 314.963 T 13-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Theam_1372 c83c92386f879a3c3fdd63d8bb41a003 743 Gene3D G3DSA:3.90.650.10 565 740 4.7E-42 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Theam_1372 c83c92386f879a3c3fdd63d8bb41a003 743 Pfam PF00586 AIR synthase related protein, N-terminal domain 81 183 1.9E-25 T 13-10-2018 IPR016188 PurM-like, N-terminal domain Theam_1372 c83c92386f879a3c3fdd63d8bb41a003 743 Pfam PF00586 AIR synthase related protein, N-terminal domain 436 556 2.4E-24 T 13-10-2018 IPR016188 PurM-like, N-terminal domain Theam_1372 c83c92386f879a3c3fdd63d8bb41a003 743 Gene3D G3DSA:3.90.650.10 22 361 5.0E-134 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Theam_1372 c83c92386f879a3c3fdd63d8bb41a003 743 SUPERFAMILY SSF56042 193 421 4.49E-58 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Theam_1372 c83c92386f879a3c3fdd63d8bb41a003 743 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 13 737 1.9E-299 T 13-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Theam_1372 c83c92386f879a3c3fdd63d8bb41a003 743 PIRSF PIRSF001587 1 741 0.0 T 13-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Theam_1372 c83c92386f879a3c3fdd63d8bb41a003 743 SUPERFAMILY SSF56042 568 737 1.5E-40 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Theam_1026 4b1e200523ef8f68a5e9fb5977d759d3 393 Gene3D G3DSA:3.90.1860.10 3 393 5.0E-81 T 13-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Theam_1026 4b1e200523ef8f68a5e9fb5977d759d3 393 Pfam PF01139 tRNA-splicing ligase RtcB 28 393 6.1E-70 T 13-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Theam_1026 4b1e200523ef8f68a5e9fb5977d759d3 393 SUPERFAMILY SSF103365 13 393 1.19E-90 T 13-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Theam_1433 74d32d8e05041701c2556e210cb266d8 433 Gene3D G3DSA:3.40.50.300 63 278 1.0E-40 T 13-10-2018 Theam_1433 74d32d8e05041701c2556e210cb266d8 433 PRINTS PR01874 DNA repair protein radA signature 79 107 1.0E-86 T 13-10-2018 Theam_1433 74d32d8e05041701c2556e210cb266d8 433 PRINTS PR01874 DNA repair protein radA signature 318 341 1.0E-86 T 13-10-2018 Theam_1433 74d32d8e05041701c2556e210cb266d8 433 PRINTS PR01874 DNA repair protein radA signature 120 137 1.0E-86 T 13-10-2018 Theam_1433 74d32d8e05041701c2556e210cb266d8 433 PRINTS PR01874 DNA repair protein radA signature 244 270 1.0E-86 T 13-10-2018 Theam_1433 74d32d8e05041701c2556e210cb266d8 433 PRINTS PR01874 DNA repair protein radA signature 10 34 1.0E-86 T 13-10-2018 Theam_1433 74d32d8e05041701c2556e210cb266d8 433 PRINTS PR01874 DNA repair protein radA signature 209 237 1.0E-86 T 13-10-2018 Theam_1433 74d32d8e05041701c2556e210cb266d8 433 PRINTS PR01874 DNA repair protein radA signature 170 194 1.0E-86 T 13-10-2018 Theam_1433 74d32d8e05041701c2556e210cb266d8 433 SUPERFAMILY SSF52540 66 287 4.48E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1433 74d32d8e05041701c2556e210cb266d8 433 Pfam PF06745 KaiC 71 144 1.2E-13 T 13-10-2018 IPR014774 KaiC-like domain Theam_1433 74d32d8e05041701c2556e210cb266d8 433 Hamap MF_01498 DNA repair protein RadA [radA]. 21 431 40.516 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Theam_1433 74d32d8e05041701c2556e210cb266d8 433 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 418 4.7E-166 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Theam_1433 74d32d8e05041701c2556e210cb266d8 433 SMART SM00382 87 240 9.1E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1433 74d32d8e05041701c2556e210cb266d8 433 SUPERFAMILY SSF54211 251 419 5.31E-27 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_1433 74d32d8e05041701c2556e210cb266d8 433 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 348 402 2.7E-5 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Theam_1433 74d32d8e05041701c2556e210cb266d8 433 Gene3D G3DSA:3.30.230.10 295 420 8.5E-12 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Theam_1344 68323c7c2daf043d36b8b3b9f70a9675 182 Pfam PF09936 SAM-dependent RNA methyltransferase 3 181 1.8E-74 T 13-10-2018 IPR019230 RNA methyltransferase domain Theam_1344 68323c7c2daf043d36b8b3b9f70a9675 182 Gene3D G3DSA:3.40.1280.10 1 182 1.2E-75 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Theam_1020 49f16677e8ac3a95a11a24e13077658d 678 SMART SM00926 1 47 2.4E-7 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1020 49f16677e8ac3a95a11a24e13077658d 678 SUPERFAMILY SSF53706 3 546 7.2E-137 T 13-10-2018 Theam_1020 49f16677e8ac3a95a11a24e13077658d 678 SUPERFAMILY SSF50692 531 675 1.77E-14 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Theam_1020 49f16677e8ac3a95a11a24e13077658d 678 Pfam PF00384 Molybdopterin oxidoreductase 85 457 5.3E-43 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1020 49f16677e8ac3a95a11a24e13077658d 678 Gene3D G3DSA:3.40.50.740 78 517 1.2E-114 T 13-10-2018 Theam_1020 49f16677e8ac3a95a11a24e13077658d 678 Gene3D G3DSA:2.40.40.20 562 677 2.3E-16 T 13-10-2018 Theam_1020 49f16677e8ac3a95a11a24e13077658d 678 Pfam PF01568 Molydopterin dinucleotide binding domain 564 670 1.0E-8 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Theam_1020 49f16677e8ac3a95a11a24e13077658d 678 Gene3D G3DSA:3.40.228.10 143 345 1.2E-114 T 13-10-2018 Theam_1020 49f16677e8ac3a95a11a24e13077658d 678 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 4 47 8.9E-6 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1020 49f16677e8ac3a95a11a24e13077658d 678 Gene3D G3DSA:3.30.200.210 1 66 1.4E-9 T 13-10-2018 Theam_0744 7aa4f87c626c7f76db84740ff6d65090 482 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 4 480 1.0E-188 T 13-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0744 7aa4f87c626c7f76db84740ff6d65090 482 Pfam PF00361 Proton-conducting membrane transporter 124 416 3.0E-81 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0744 7aa4f87c626c7f76db84740ff6d65090 482 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 130 149 1.3E-45 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0744 7aa4f87c626c7f76db84740ff6d65090 482 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 160 184 1.3E-45 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0744 7aa4f87c626c7f76db84740ff6d65090 482 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 323 342 1.3E-45 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0744 7aa4f87c626c7f76db84740ff6d65090 482 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 375 401 1.3E-45 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0744 7aa4f87c626c7f76db84740ff6d65090 482 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 235 259 1.3E-45 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0213 e641bb7ec65169f0c7676aac65c39c55 408 Pfam PF01966 HD domain 56 172 3.9E-11 T 13-10-2018 IPR006674 HD domain Theam_0213 e641bb7ec65169f0c7676aac65c39c55 408 Gene3D G3DSA:1.10.3210.10 5 372 3.6E-101 T 13-10-2018 Theam_0213 e641bb7ec65169f0c7676aac65c39c55 408 Gene3D G3DSA:1.20.1250.30 101 347 3.6E-101 T 13-10-2018 Theam_0213 e641bb7ec65169f0c7676aac65c39c55 408 SMART SM00471 52 179 5.5E-10 T 13-10-2018 IPR003607 HD/PDEase domain Theam_0213 e641bb7ec65169f0c7676aac65c39c55 408 SUPERFAMILY SSF109604 3 356 3.93E-82 T 13-10-2018 Theam_0795 9b1c8024f141712a9d94f00468474112 512 Gene3D G3DSA:3.90.550.10 125 328 6.6E-7 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0795 9b1c8024f141712a9d94f00468474112 512 Pfam PF13641 Glycosyltransferase like family 2 80 343 2.7E-35 T 13-10-2018 Theam_0795 9b1c8024f141712a9d94f00468474112 512 ProDom PD339107 ALGINATE ALG8 BIOSYNTHESIS TRANSFERASE TRANSMEMBRANE MEMBRANE 2.4.1.- GLYCOSYL GLYCOSYLTRANSFERASE PRECURSOR 23 462 9.0E-101 T 13-10-2018 Theam_0795 9b1c8024f141712a9d94f00468474112 512 SUPERFAMILY SSF53448 146 435 3.26E-10 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_1001 0ce52b42012e93aa85b6a25950a66884 373 Gene3D G3DSA:3.60.20.10 52 368 8.0E-49 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Theam_1001 0ce52b42012e93aa85b6a25950a66884 373 PIRSF PIRSF018774 2 371 2.8E-161 T 13-10-2018 IPR012375 Glutamate synthase large subunit domain 1 stand-alone protein Theam_1001 0ce52b42012e93aa85b6a25950a66884 373 Pfam PF00310 Glutamine amidotransferases class-II 96 222 6.9E-11 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Theam_1001 0ce52b42012e93aa85b6a25950a66884 373 SUPERFAMILY SSF56235 10 362 1.78E-79 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Theam_0231 219d58e6f540e266b034e7eedbe94a06 262 SUPERFAMILY SSF102705 1 256 3.79E-71 T 13-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Theam_0231 219d58e6f540e266b034e7eedbe94a06 262 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 242 7.7E-67 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Theam_0231 219d58e6f540e266b034e7eedbe94a06 262 Gene3D G3DSA:3.40.1390.30 6 233 1.7E-64 T 13-10-2018 Theam_0231 219d58e6f540e266b034e7eedbe94a06 262 Gene3D G3DSA:3.40.1390.30 101 221 1.7E-64 T 13-10-2018 Theam_0231 219d58e6f540e266b034e7eedbe94a06 262 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 3 241 1.5E-56 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Theam_0155 9349dda3119a59b55f86d0662e5abc5f 356 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 47 352 4.3E-130 T 13-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 Theam_0155 9349dda3119a59b55f86d0662e5abc5f 356 Hamap MF_00992 Cyclic dehypoxanthine futalosine synthase [mqnC]. 11 355 55.375 T 13-10-2018 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 Theam_0155 9349dda3119a59b55f86d0662e5abc5f 356 SMART SM00729 51 273 0.0074 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_0155 9349dda3119a59b55f86d0662e5abc5f 356 TIGRFAM TIGR03699 menaquin_MqnC: dehypoxanthine futalosine cyclase 12 351 2.2E-159 T 13-10-2018 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 Theam_0155 9349dda3119a59b55f86d0662e5abc5f 356 Gene3D G3DSA:3.20.20.70 1 343 3.5E-62 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0155 9349dda3119a59b55f86d0662e5abc5f 356 Pfam PF04055 Radical SAM superfamily 56 227 5.8E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0155 9349dda3119a59b55f86d0662e5abc5f 356 SUPERFAMILY SSF102114 11 345 5.36E-55 T 13-10-2018 Theam_0155 9349dda3119a59b55f86d0662e5abc5f 356 PIRSF PIRSF004762 1 356 2.7E-115 T 13-10-2018 Theam_0573 d1cf8056e04684d89179ddaf8e70570c 768 Gene3D G3DSA:3.30.450.20 72 222 5.0E-33 T 13-10-2018 Theam_0573 d1cf8056e04684d89179ddaf8e70570c 768 Gene3D G3DSA:3.20.20.450 531 768 6.5E-70 T 13-10-2018 IPR035919 EAL domain superfamily Theam_0573 d1cf8056e04684d89179ddaf8e70570c 768 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 512 3.8E-13 T 13-10-2018 IPR000160 GGDEF domain Theam_0573 d1cf8056e04684d89179ddaf8e70570c 768 SMART SM01049 68 163 4.9E-10 T 13-10-2018 IPR033480 Single Cache domain 2 Theam_0573 d1cf8056e04684d89179ddaf8e70570c 768 SMART SM00052 531 768 1.9E-55 T 13-10-2018 IPR001633 EAL domain Theam_0573 d1cf8056e04684d89179ddaf8e70570c 768 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 504 3.0E-10 T 13-10-2018 IPR000160 GGDEF domain Theam_0573 d1cf8056e04684d89179ddaf8e70570c 768 Gene3D G3DSA:3.30.70.270 361 530 9.9E-22 T 13-10-2018 Theam_0573 d1cf8056e04684d89179ddaf8e70570c 768 SMART SM00267 352 519 1.8E-7 T 13-10-2018 IPR000160 GGDEF domain Theam_0573 d1cf8056e04684d89179ddaf8e70570c 768 Pfam PF00563 EAL domain 538 764 4.0E-63 T 13-10-2018 IPR001633 EAL domain Theam_0573 d1cf8056e04684d89179ddaf8e70570c 768 Pfam PF08269 Cache domain 44 221 1.8E-43 T 13-10-2018 IPR004010 Double Cache domain 2 Theam_0573 d1cf8056e04684d89179ddaf8e70570c 768 SUPERFAMILY SSF141868 538 765 4.45E-65 T 13-10-2018 IPR035919 EAL domain superfamily Theam_0573 d1cf8056e04684d89179ddaf8e70570c 768 SUPERFAMILY SSF55073 369 518 1.49E-17 T 13-10-2018 IPR029787 Nucleotide cyclase Theam_0656 87dae07ee11e159b7bf800d445e0efd3 410 Gene3D G3DSA:1.10.8.60 310 410 4.5E-41 T 13-10-2018 Theam_0656 87dae07ee11e159b7bf800d445e0efd3 410 SMART SM01086 311 404 8.9E-34 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Theam_0656 87dae07ee11e159b7bf800d445e0efd3 410 SMART SM00994 8 48 2.6E-17 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Theam_0656 87dae07ee11e159b7bf800d445e0efd3 410 Pfam PF07724 AAA domain (Cdc48 subfamily) 108 305 2.8E-50 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Theam_0656 87dae07ee11e159b7bf800d445e0efd3 410 Gene3D G3DSA:3.40.50.300 54 309 2.9E-112 T 13-10-2018 Theam_0656 87dae07ee11e159b7bf800d445e0efd3 410 Gene3D G3DSA:3.30.50.30 2 48 4.4E-14 T 13-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Theam_0656 87dae07ee11e159b7bf800d445e0efd3 410 SMART SM00382 108 260 1.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0656 87dae07ee11e159b7bf800d445e0efd3 410 Pfam PF06689 ClpX C4-type zinc finger 9 46 5.2E-17 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Theam_0656 87dae07ee11e159b7bf800d445e0efd3 410 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 409 52.53 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Theam_0656 87dae07ee11e159b7bf800d445e0efd3 410 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 389 3.3E-17 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Theam_0656 87dae07ee11e159b7bf800d445e0efd3 410 SUPERFAMILY SSF57716 10 45 1.71E-7 T 13-10-2018 Theam_0656 87dae07ee11e159b7bf800d445e0efd3 410 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 400 8.2E-201 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Theam_0656 87dae07ee11e159b7bf800d445e0efd3 410 SUPERFAMILY SSF52540 59 392 6.56E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1529 57977996200500c3697fffabe244b18c 284 ProSitePatterns PS01087 Radical activating enzymes signature. 55 76 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Theam_1529 57977996200500c3697fffabe244b18c 284 Gene3D G3DSA:3.20.20.70 52 282 4.9E-16 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1529 57977996200500c3697fffabe244b18c 284 Pfam PF13353 4Fe-4S single cluster domain 56 156 1.3E-4 T 13-10-2018 Theam_1529 57977996200500c3697fffabe244b18c 284 SUPERFAMILY SSF102114 62 194 8.76E-14 T 13-10-2018 Theam_1529 57977996200500c3697fffabe244b18c 284 PIRSF PIRSF004869 2 283 2.3E-81 T 13-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted Theam_1529 57977996200500c3697fffabe244b18c 284 Pfam PF04055 Radical SAM superfamily 62 230 5.7E-13 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0972 95489a94029eff6808815368a2ac0140 810 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 805 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Theam_0972 95489a94029eff6808815368a2ac0140 810 SUPERFAMILY SSF52009 363 475 6.67E-35 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Theam_0972 95489a94029eff6808815368a2ac0140 810 Gene3D G3DSA:3.30.1490.20 3 196 2.1E-74 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Theam_0972 95489a94029eff6808815368a2ac0140 810 Gene3D G3DSA:3.50.30.10 367 478 4.4E-42 T 13-10-2018 Theam_0972 95489a94029eff6808815368a2ac0140 810 Gene3D G3DSA:3.20.20.60 490 803 1.7E-101 T 13-10-2018 Theam_0972 95489a94029eff6808815368a2ac0140 810 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 709 727 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Theam_0972 95489a94029eff6808815368a2ac0140 810 SUPERFAMILY SSF51621 473 806 7.14E-96 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Theam_0972 95489a94029eff6808815368a2ac0140 810 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 762 774 3.5E-5 T 13-10-2018 Theam_0972 95489a94029eff6808815368a2ac0140 810 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 709 724 3.5E-5 T 13-10-2018 Theam_0972 95489a94029eff6808815368a2ac0140 810 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 726 741 3.5E-5 T 13-10-2018 Theam_0972 95489a94029eff6808815368a2ac0140 810 Pfam PF00391 PEP-utilising enzyme, mobile domain 396 467 1.0E-26 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Theam_0972 95489a94029eff6808815368a2ac0140 810 PIRSF PIRSF000854 1 808 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Theam_0972 95489a94029eff6808815368a2ac0140 810 Gene3D G3DSA:3.30.470.20 197 361 2.8E-52 T 13-10-2018 Theam_0972 95489a94029eff6808815368a2ac0140 810 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 486 802 7.0E-61 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Theam_0972 95489a94029eff6808815368a2ac0140 810 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 426 437 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Theam_0972 95489a94029eff6808815368a2ac0140 810 SUPERFAMILY SSF56059 4 396 3.18E-102 T 13-10-2018 Theam_0972 95489a94029eff6808815368a2ac0140 810 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 19 350 5.7E-120 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Theam_0315 5b0b851b8ce9819bb7e24a36b9c29f4c 936 Gene3D G3DSA:1.20.1580.10 91 490 8.6E-238 T 13-10-2018 Theam_0315 5b0b851b8ce9819bb7e24a36b9c29f4c 936 Gene3D G3DSA:3.40.50.300 6 593 8.6E-238 T 13-10-2018 Theam_0315 5b0b851b8ce9819bb7e24a36b9c29f4c 936 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Theam_0315 5b0b851b8ce9819bb7e24a36b9c29f4c 936 SMART SM00382 629 902 1.9E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0315 5b0b851b8ce9819bb7e24a36b9c29f4c 936 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 935 22.297 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Theam_0315 5b0b851b8ce9819bb7e24a36b9c29f4c 936 Gene3D G3DSA:3.40.50.300 610 931 1.0E-144 T 13-10-2018 Theam_0315 5b0b851b8ce9819bb7e24a36b9c29f4c 936 SUPERFAMILY SSF52540 611 907 1.9E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0315 5b0b851b8ce9819bb7e24a36b9c29f4c 936 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 921 0.0 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Theam_0315 5b0b851b8ce9819bb7e24a36b9c29f4c 936 SUPERFAMILY SSF52540 9 567 3.11E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0315 5b0b851b8ce9819bb7e24a36b9c29f4c 936 Gene3D G3DSA:3.30.190.20 131 244 8.6E-238 T 13-10-2018 Theam_0315 5b0b851b8ce9819bb7e24a36b9c29f4c 936 ProSitePatterns PS00211 ABC transporters family signature. 826 840 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Theam_0315 5b0b851b8ce9819bb7e24a36b9c29f4c 936 Gene3D G3DSA:1.10.8.280 287 401 8.6E-238 T 13-10-2018 Theam_0315 5b0b851b8ce9819bb7e24a36b9c29f4c 936 Gene3D G3DSA:1.20.1580.10 689 826 1.0E-144 T 13-10-2018 Theam_1428 126af7e2ce43fb61df550df60107c929 1278 Pfam PF07669 Eco57I restriction-modification methylase 719 850 2.1E-10 T 13-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 Theam_1428 126af7e2ce43fb61df550df60107c929 1278 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 472 486 6.8E-12 T 13-10-2018 Theam_1428 126af7e2ce43fb61df550df60107c929 1278 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 719 731 6.8E-12 T 13-10-2018 Theam_1428 126af7e2ce43fb61df550df60107c929 1278 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 779 803 6.8E-12 T 13-10-2018 Theam_1428 126af7e2ce43fb61df550df60107c929 1278 SUPERFAMILY SSF53335 221 854 1.64E-50 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_1428 126af7e2ce43fb61df550df60107c929 1278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 722 728 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Theam_0450 e82a654368ebf4467c8776dc91afbd75 445 SUPERFAMILY SSF51735 5 204 1.08E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0450 e82a654368ebf4467c8776dc91afbd75 445 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 211 302 2.0E-41 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Theam_0450 e82a654368ebf4467c8776dc91afbd75 445 Gene3D G3DSA:3.40.50.720 241 445 1.7E-76 T 13-10-2018 Theam_0450 e82a654368ebf4467c8776dc91afbd75 445 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 6 190 2.6E-66 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Theam_0450 e82a654368ebf4467c8776dc91afbd75 445 SUPERFAMILY SSF52413 311 436 7.19E-39 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Theam_0450 e82a654368ebf4467c8776dc91afbd75 445 Gene3D G3DSA:3.40.50.720 2 207 3.3E-77 T 13-10-2018 Theam_0450 e82a654368ebf4467c8776dc91afbd75 445 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 6 426 2.2E-146 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Theam_0450 e82a654368ebf4467c8776dc91afbd75 445 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 430 3.9E-30 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Theam_0450 e82a654368ebf4467c8776dc91afbd75 445 Gene3D G3DSA:1.20.5.100 209 240 3.8E-19 T 13-10-2018 Theam_0450 e82a654368ebf4467c8776dc91afbd75 445 SUPERFAMILY SSF48179 210 305 3.74E-34 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Theam_0450 e82a654368ebf4467c8776dc91afbd75 445 PIRSF PIRSF500134 5 445 1.1E-175 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 Theam_0450 e82a654368ebf4467c8776dc91afbd75 445 SMART SM00984 325 430 1.1E-46 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Theam_0450 e82a654368ebf4467c8776dc91afbd75 445 PIRSF PIRSF000124 5 444 2.9E-145 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Theam_0154 3d4866978f3e8aacbd74890d4cad63b6 227 SUPERFAMILY SSF52540 44 203 1.88E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0154 3d4866978f3e8aacbd74890d4cad63b6 227 SMART SM00382 78 208 1.2E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0154 3d4866978f3e8aacbd74890d4cad63b6 227 Gene3D G3DSA:3.40.50.300 30 215 6.3E-44 T 13-10-2018 Theam_0154 3d4866978f3e8aacbd74890d4cad63b6 227 Pfam PF01695 IstB-like ATP binding protein 35 187 5.7E-17 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Theam_1812 0f1f4b55d3ef4f568c902b427d2f6148 481 SUPERFAMILY SSF52540 76 165 1.73E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1812 0f1f4b55d3ef4f568c902b427d2f6148 481 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 246 376 3.3E-27 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Theam_1812 0f1f4b55d3ef4f568c902b427d2f6148 481 SUPERFAMILY SSF52540 216 423 9.34E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1812 0f1f4b55d3ef4f568c902b427d2f6148 481 SMART SM00382 242 379 1.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1812 0f1f4b55d3ef4f568c902b427d2f6148 481 Gene3D G3DSA:3.40.50.300 200 393 3.5E-37 T 13-10-2018 Theam_1218 7465068ff6037e8d6ef4bcd2aa0f9b5b 150 PIRSF PIRSF005384 1 147 4.5E-65 T 13-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Theam_1218 7465068ff6037e8d6ef4bcd2aa0f9b5b 150 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 144 1.8E-62 T 13-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 Theam_1218 7465068ff6037e8d6ef4bcd2aa0f9b5b 150 SUPERFAMILY SSF89623 1 144 1.22E-64 T 13-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Theam_1218 7465068ff6037e8d6ef4bcd2aa0f9b5b 150 Gene3D G3DSA:3.40.1400.10 1 149 5.2E-69 T 13-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Theam_1218 7465068ff6037e8d6ef4bcd2aa0f9b5b 150 Pfam PF02502 Ribose/Galactose Isomerase 3 140 5.1E-62 T 13-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Theam_1218 7465068ff6037e8d6ef4bcd2aa0f9b5b 150 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 145 9.8E-63 T 13-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Theam_0300 21bb116987571c5519a85f49b413fa2f 125 PIRSF PIRSF002070 1 121 1.6E-35 T 13-10-2018 Theam_0300 21bb116987571c5519a85f49b413fa2f 125 Gene3D G3DSA:2.40.50.140 1 121 1.1E-40 T 13-10-2018 Theam_0300 21bb116987571c5519a85f49b413fa2f 125 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 117 4.2E-35 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Theam_0300 21bb116987571c5519a85f49b413fa2f 125 Pfam PF00436 Single-strand binding protein family 2 103 5.2E-31 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Theam_0300 21bb116987571c5519a85f49b413fa2f 125 Hamap MF_00984 Single-stranded DNA-binding protein. 2 109 28.54 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Theam_0300 21bb116987571c5519a85f49b413fa2f 125 SUPERFAMILY SSF50249 1 125 2.09E-42 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0467 2079f6ea25e995328eeb8ab7b5399f20 883 SUPERFAMILY SSF81593 767 869 3.77E-11 T 13-10-2018 Theam_0467 2079f6ea25e995328eeb8ab7b5399f20 883 Gene3D G3DSA:3.30.460.100 562 758 9.5E-28 T 13-10-2018 Theam_0467 2079f6ea25e995328eeb8ab7b5399f20 883 Gene3D G3DSA:3.30.460.100 67 299 3.0E-55 T 13-10-2018 Theam_0467 2079f6ea25e995328eeb8ab7b5399f20 883 Pfam PF08335 GlnD PII-uridylyltransferase 317 454 5.9E-36 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Theam_0467 2079f6ea25e995328eeb8ab7b5399f20 883 SUPERFAMILY SSF81301 55 304 3.79E-56 T 13-10-2018 Theam_0467 2079f6ea25e995328eeb8ab7b5399f20 883 Gene3D G3DSA:1.20.120.330 303 457 8.1E-48 T 13-10-2018 Theam_0467 2079f6ea25e995328eeb8ab7b5399f20 883 SUPERFAMILY SSF81593 305 454 2.2E-39 T 13-10-2018 Theam_0467 2079f6ea25e995328eeb8ab7b5399f20 883 SUPERFAMILY SSF81301 545 747 2.09E-32 T 13-10-2018 Theam_0467 2079f6ea25e995328eeb8ab7b5399f20 883 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 59 294 1.3E-50 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Theam_0467 2079f6ea25e995328eeb8ab7b5399f20 883 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 648 747 3.3E-18 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Theam_0467 2079f6ea25e995328eeb8ab7b5399f20 883 Gene3D G3DSA:1.20.120.330 764 878 1.2E-8 T 13-10-2018 Theam_0628 b0e9dca15820c16768479106f92a559e 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.6E-45 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Theam_0628 b0e9dca15820c16768479106f92a559e 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Theam_0628 b0e9dca15820c16768479106f92a559e 112 SMART SM00938 4 105 2.8E-69 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Theam_0628 b0e9dca15820c16768479106f92a559e 112 SUPERFAMILY SSF54913 1 112 2.22E-48 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Theam_0628 b0e9dca15820c16768479106f92a559e 112 Gene3D G3DSA:3.30.70.120 1 112 3.6E-50 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Theam_0628 b0e9dca15820c16768479106f92a559e 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Theam_0628 b0e9dca15820c16768479106f92a559e 112 PRINTS PR00340 P-II protein signature 83 103 2.2E-45 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Theam_0628 b0e9dca15820c16768479106f92a559e 112 PRINTS PR00340 P-II protein signature 23 41 2.2E-45 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Theam_0628 b0e9dca15820c16768479106f92a559e 112 PRINTS PR00340 P-II protein signature 2 17 2.2E-45 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Theam_0628 b0e9dca15820c16768479106f92a559e 112 PRINTS PR00340 P-II protein signature 52 75 2.2E-45 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Theam_0628 b0e9dca15820c16768479106f92a559e 112 PIRSF PIRSF039144 1 112 2.5E-57 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 706 720 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 424 543 3.9E-40 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 SMART SM01096 421 543 1.8E-65 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 SUPERFAMILY SSF52440 554 672 2.73E-47 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 Gene3D G3DSA:3.40.50.20 520 659 2.7E-61 T 13-10-2018 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 SUPERFAMILY SSF48108 396 546 2.62E-48 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1061 13.31 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 Gene3D G3DSA:3.40.50.20 1 116 2.3E-51 T 13-10-2018 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 SMART SM00851 954 1041 2.4E-35 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.3E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.3E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.3E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.3E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.3E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 1.3E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.3E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 Gene3D G3DSA:3.30.470.20 662 931 1.4E-121 T 13-10-2018 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 SUPERFAMILY SSF56059 128 400 4.24E-110 T 13-10-2018 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 Gene3D G3DSA:1.10.1030.10 403 518 6.1E-35 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 670 872 2.9E-42 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 7.3E-73 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 Gene3D G3DSA:3.30.470.20 119 402 7.1E-128 T 13-10-2018 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 SUPERFAMILY SSF52440 2 127 2.16E-51 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 Gene3D G3DSA:3.40.50.1380 938 1071 8.3E-45 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 SUPERFAMILY SSF52335 938 1070 5.36E-40 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 Pfam PF02142 MGS-like domain 955 1041 3.9E-25 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 SUPERFAMILY SSF56059 670 929 7.25E-108 T 13-10-2018 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1069 14.257 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1567 64b3257cd523610c4432a3deaa9f4cb3 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 835 842 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Theam_1486 edb714db64f7b2f928740e616a9494d1 344 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 6 336 1.2E-143 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Theam_1486 edb714db64f7b2f928740e616a9494d1 344 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 6 343 47.195 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Theam_1486 edb714db64f7b2f928740e616a9494d1 344 Gene3D G3DSA:3.30.1330.10 5 169 1.8E-66 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Theam_1486 edb714db64f7b2f928740e616a9494d1 344 SUPERFAMILY SSF55326 6 168 8.37E-52 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Theam_1486 edb714db64f7b2f928740e616a9494d1 344 SUPERFAMILY SSF56042 171 342 2.09E-60 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Theam_1486 edb714db64f7b2f928740e616a9494d1 344 Gene3D G3DSA:3.90.650.10 170 343 4.8E-71 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Theam_1486 edb714db64f7b2f928740e616a9494d1 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 340 9.3E-32 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Theam_1486 edb714db64f7b2f928740e616a9494d1 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 163 5.3E-16 T 13-10-2018 IPR016188 PurM-like, N-terminal domain Theam_0428 4282678167f5c241f099418478ce28f1 244 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 8 206 2.6E-37 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Theam_0428 4282678167f5c241f099418478ce28f1 244 Gene3D G3DSA:3.30.420.40 10 222 2.6E-43 T 13-10-2018 Theam_0428 4282678167f5c241f099418478ce28f1 244 SUPERFAMILY SSF53067 9 107 1.1E-10 T 13-10-2018 Theam_0428 4282678167f5c241f099418478ce28f1 244 Gene3D G3DSA:3.30.420.490 110 217 2.6E-43 T 13-10-2018 Theam_0428 4282678167f5c241f099418478ce28f1 244 SUPERFAMILY SSF53067 110 233 4.02E-24 T 13-10-2018 Theam_0428 4282678167f5c241f099418478ce28f1 244 Pfam PF03309 Type III pantothenate kinase 9 189 8.0E-40 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Theam_0428 4282678167f5c241f099418478ce28f1 244 Hamap MF_01274 Type III pantothenate kinase [coaX]. 7 233 21.176 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Theam_1603 60930ae71119102aa214ef8b42d18362 69 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 13 62 3.6E-21 T 13-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter Theam_0194 3726c258bb7caf5da2c39a9c298a804c 234 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Theam_0194 3726c258bb7caf5da2c39a9c298a804c 234 Gene3D G3DSA:3.40.50.300 2 229 1.3E-44 T 13-10-2018 Theam_0194 3726c258bb7caf5da2c39a9c298a804c 234 SUPERFAMILY SSF52540 9 218 1.07E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0194 3726c258bb7caf5da2c39a9c298a804c 234 Pfam PF00005 ABC transporter 13 149 3.5E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_0194 3726c258bb7caf5da2c39a9c298a804c 234 SMART SM00382 22 196 1.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0648 12bc123f6055682a5ee17d3139be1663 353 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 11 281 6.5E-46 T 13-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Theam_0648 12bc123f6055682a5ee17d3139be1663 353 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 353 56.069 T 13-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Theam_0648 12bc123f6055682a5ee17d3139be1663 353 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 10 287 2.9E-70 T 13-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Theam_0648 12bc123f6055682a5ee17d3139be1663 353 Gene3D G3DSA:3.30.590.20 2 347 2.2E-84 T 13-10-2018 Theam_0648 12bc123f6055682a5ee17d3139be1663 353 SUPERFAMILY SSF55931 3 338 1.63E-78 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Theam_0216 41a6d5557c4a3892f01a0c10483370c2 206 Pfam PF01300 Telomere recombination 16 189 3.1E-40 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Theam_0216 41a6d5557c4a3892f01a0c10483370c2 206 SUPERFAMILY SSF55821 5 199 8.55E-45 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Theam_0216 41a6d5557c4a3892f01a0c10483370c2 206 Gene3D G3DSA:3.90.870.10 2 203 7.9E-51 T 13-10-2018 Theam_0216 41a6d5557c4a3892f01a0c10483370c2 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 6 200 6.7E-40 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Theam_1181 731d3608c69302da1fd9834d2524a063 371 Pfam PF02073 Thermophilic metalloprotease (M29) 171 368 7.5E-15 T 13-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Theam_1181 731d3608c69302da1fd9834d2524a063 371 SUPERFAMILY SSF144052 53 369 6.54E-52 T 13-10-2018 Theam_0153 dc87a1a84800f1f488e9e78d4ad15e2d 297 SUPERFAMILY SSF111331 12 297 6.02E-86 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Theam_0153 dc87a1a84800f1f488e9e78d4ad15e2d 297 Gene3D G3DSA:3.40.50.10330 30 296 7.6E-87 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Theam_0153 dc87a1a84800f1f488e9e78d4ad15e2d 297 Gene3D G3DSA:2.60.200.30 137 273 7.6E-87 T 13-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Theam_0153 dc87a1a84800f1f488e9e78d4ad15e2d 297 Pfam PF01513 ATP-NAD kinase 13 276 1.4E-64 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Theam_0153 dc87a1a84800f1f488e9e78d4ad15e2d 297 Hamap MF_00361 NAD kinase [nadK]. 11 296 33.119 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Theam_1627 a9588bf060c27eec596c21535fef718e 895 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 778 796 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Theam_1627 a9588bf060c27eec596c21535fef718e 895 PIRSF PIRSF000853 2 894 0.0 T 13-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Theam_1627 a9588bf060c27eec596c21535fef718e 895 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 3 888 0.0 T 13-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Theam_1627 a9588bf060c27eec596c21535fef718e 895 Gene3D G3DSA:3.20.20.60 550 890 1.7E-150 T 13-10-2018 Theam_1627 a9588bf060c27eec596c21535fef718e 895 Gene3D G3DSA:1.10.189.10 359 547 7.7E-81 T 13-10-2018 Theam_1627 a9588bf060c27eec596c21535fef718e 895 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 303 6.1E-49 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Theam_1627 a9588bf060c27eec596c21535fef718e 895 Pfam PF00391 PEP-utilising enzyme, mobile domain 440 521 1.9E-28 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Theam_1627 a9588bf060c27eec596c21535fef718e 895 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 536 886 1.5E-90 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Theam_1627 a9588bf060c27eec596c21535fef718e 895 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 468 479 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Theam_1627 a9588bf060c27eec596c21535fef718e 895 SUPERFAMILY SSF56059 2 392 2.59E-151 T 13-10-2018 Theam_1627 a9588bf060c27eec596c21535fef718e 895 Gene3D G3DSA:3.30.1490.20 15 247 6.4E-113 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Theam_1627 a9588bf060c27eec596c21535fef718e 895 SUPERFAMILY SSF51621 530 888 2.71E-128 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Theam_1627 a9588bf060c27eec596c21535fef718e 895 Gene3D G3DSA:3.30.470.20 248 355 8.1E-43 T 13-10-2018 Theam_1627 a9588bf060c27eec596c21535fef718e 895 Gene3D G3DSA:3.50.30.10 397 527 7.7E-81 T 13-10-2018 Theam_1627 a9588bf060c27eec596c21535fef718e 895 SUPERFAMILY SSF52009 404 530 4.06E-39 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Theam_1627 a9588bf060c27eec596c21535fef718e 895 Gene3D G3DSA:1.20.80.30 115 202 6.4E-113 T 13-10-2018 Theam_1089 1af3b0d395c766cddbe0680fd56c5198 388 Pfam PF13807 G-rich domain on putative tyrosine kinase 309 370 1.6E-8 T 13-10-2018 IPR032807 Tyrosine kinase, G-rich domain Theam_1089 1af3b0d395c766cddbe0680fd56c5198 388 Pfam PF02706 Chain length determinant protein 15 110 4.5E-15 T 13-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Theam_1309 ac6105c56416fad5396874e86c7e1a39 283 SUPERFAMILY SSF52374 1 279 1.21E-113 T 13-10-2018 Theam_1309 ac6105c56416fad5396874e86c7e1a39 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 42.169 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Theam_1309 ac6105c56416fad5396874e86c7e1a39 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 277 5.6E-109 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Theam_1309 ac6105c56416fad5396874e86c7e1a39 283 Gene3D G3DSA:3.40.50.620 1 174 1.5E-81 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1309 ac6105c56416fad5396874e86c7e1a39 283 Gene3D G3DSA:3.30.1300.10 178 277 1.3E-35 T 13-10-2018 Theam_1309 ac6105c56416fad5396874e86c7e1a39 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 84 1.0E-9 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Theam_1309 ac6105c56416fad5396874e86c7e1a39 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 277 5.5E-108 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 354 370 1.2E-31 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 454 468 1.2E-31 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.2E-31 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 275 284 1.2E-31 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 163 181 1.2E-31 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 SUPERFAMILY SSF56712 1 539 4.05E-172 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 Gene3D G3DSA:3.40.50.140 1 134 1.7E-46 T 13-10-2018 Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 SMART SM00493 1 103 4.1E-25 T 13-10-2018 IPR006171 TOPRIM domain Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 2 528 8.6E-179 T 13-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 SMART SM00437 233 491 1.3E-103 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 SMART SM00436 104 193 1.7E-43 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 Gene3D G3DSA:1.10.460.10 136 531 4.1E-131 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 Pfam PF01751 Toprim domain 1 113 7.0E-24 T 13-10-2018 IPR006171 TOPRIM domain Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 Gene3D G3DSA:2.70.20.10 185 437 4.1E-131 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 629 45.147 T 13-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 Pfam PF01131 DNA topoisomerase 128 526 1.8E-121 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Theam_1748 3b3e83959b3a4e93e6bb6479bb79d37a 648 Gene3D G3DSA:1.10.290.10 241 368 4.1E-131 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Theam_0710 cab88c6c0221acb1e84e152c6d9aaad1 296 SUPERFAMILY SSF50249 2 64 2.1E-5 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0710 cab88c6c0221acb1e84e152c6d9aaad1 296 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 2 289 32.215 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Theam_0710 cab88c6c0221acb1e84e152c6d9aaad1 296 Pfam PF03193 RsgA GTPase 60 224 8.5E-54 T 13-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 Theam_0710 cab88c6c0221acb1e84e152c6d9aaad1 296 Gene3D G3DSA:1.10.40.50 227 296 1.4E-21 T 13-10-2018 Theam_0710 cab88c6c0221acb1e84e152c6d9aaad1 296 Gene3D G3DSA:2.40.50.140 1 62 2.7E-17 T 13-10-2018 Theam_0710 cab88c6c0221acb1e84e152c6d9aaad1 296 Gene3D G3DSA:3.40.50.300 63 226 1.2E-44 T 13-10-2018 Theam_0710 cab88c6c0221acb1e84e152c6d9aaad1 296 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 40 282 6.0E-70 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Theam_0710 cab88c6c0221acb1e84e152c6d9aaad1 296 SUPERFAMILY SSF52540 67 283 2.62E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1520 3126016c42e02ede0dcef3e2a2a78e20 472 SUPERFAMILY SSF47323 338 471 2.62E-29 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1520 3126016c42e02ede0dcef3e2a2a78e20 472 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 1.7E-30 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Theam_1520 3126016c42e02ede0dcef3e2a2a78e20 472 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 1.7E-30 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Theam_1520 3126016c42e02ede0dcef3e2a2a78e20 472 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 221 242 1.7E-30 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Theam_1520 3126016c42e02ede0dcef3e2a2a78e20 472 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 190 208 1.7E-30 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Theam_1520 3126016c42e02ede0dcef3e2a2a78e20 472 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 472 40.188 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Theam_1520 3126016c42e02ede0dcef3e2a2a78e20 472 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 312 4.9E-139 T 13-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Theam_1520 3126016c42e02ede0dcef3e2a2a78e20 472 SUPERFAMILY SSF52374 2 312 3.33E-109 T 13-10-2018 Theam_1520 3126016c42e02ede0dcef3e2a2a78e20 472 SMART SM00840 349 422 2.4E-11 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Theam_1520 3126016c42e02ede0dcef3e2a2a78e20 472 Gene3D G3DSA:1.20.120.640 305 472 5.7E-34 T 13-10-2018 Theam_1520 3126016c42e02ede0dcef3e2a2a78e20 472 Gene3D G3DSA:3.40.50.620 1 304 2.0E-145 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1520 3126016c42e02ede0dcef3e2a2a78e20 472 Pfam PF09190 DALR domain 349 415 5.9E-13 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Theam_1520 3126016c42e02ede0dcef3e2a2a78e20 472 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 471 1.4E-176 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Theam_1271 8bb21e660a699f703b401737f85c59b6 373 SUPERFAMILY SSF46548 111 240 7.32E-24 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Theam_1271 8bb21e660a699f703b401737f85c59b6 373 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 233 1.5E-66 T 13-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1271 8bb21e660a699f703b401737f85c59b6 373 Pfam PF13183 4Fe-4S dicluster domain 151 223 5.1E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_1271 8bb21e660a699f703b401737f85c59b6 373 SUPERFAMILY SSF54292 3 106 1.02E-26 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Theam_1271 8bb21e660a699f703b401737f85c59b6 373 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 209 220 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_1271 8bb21e660a699f703b401737f85c59b6 373 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 2.6E-33 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1271 8bb21e660a699f703b401737f85c59b6 373 Gene3D G3DSA:3.10.20.30 1 106 4.5E-36 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Theam_1271 8bb21e660a699f703b401737f85c59b6 373 Gene3D G3DSA:1.10.1060.10 107 245 3.2E-31 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Theam_1572 1616c30f4ce25779e64f4a5362e93bb2 388 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 300 383 2.1E-9 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_1572 1616c30f4ce25779e64f4a5362e93bb2 388 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 5 273 1.8E-54 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_1572 1616c30f4ce25779e64f4a5362e93bb2 388 SUPERFAMILY SSF55120 5 387 1.44E-69 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_1572 1616c30f4ce25779e64f4a5362e93bb2 388 PIRSF PIRSF037016 5 270 3.0E-39 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_1572 1616c30f4ce25779e64f4a5362e93bb2 388 PIRSF PIRSF037016 277 388 4.4E-5 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_1572 1616c30f4ce25779e64f4a5362e93bb2 388 Gene3D G3DSA:3.30.2350.20 282 388 1.4E-9 T 13-10-2018 Theam_1572 1616c30f4ce25779e64f4a5362e93bb2 388 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 64 77 - T 13-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 Theam_1572 1616c30f4ce25779e64f4a5362e93bb2 388 Gene3D G3DSA:3.30.2350.20 1 186 5.4E-48 T 13-10-2018 Theam_1572 1616c30f4ce25779e64f4a5362e93bb2 388 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 1 388 23.304 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_1572 1616c30f4ce25779e64f4a5362e93bb2 388 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 6 387 2.0E-56 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 SUPERFAMILY SSF52021 5 151 1.83E-57 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 7 374 4.0E-154 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 Gene3D G3DSA:3.40.50.880 153 377 1.3E-73 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 SUPERFAMILY SSF52317 156 377 2.1E-60 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 PRINTS PR00097 Anthranilate synthase component II signature 234 243 1.0E-6 T 13-10-2018 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 PRINTS PR00097 Anthranilate synthase component II signature 348 361 1.0E-6 T 13-10-2018 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 PRINTS PR00097 Anthranilate synthase component II signature 263 274 1.0E-6 T 13-10-2018 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 SMART SM01097 5 135 2.9E-92 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 5 377 50.206 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 234 243 1.9E-11 T 13-10-2018 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 348 361 1.9E-11 T 13-10-2018 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 1.9E-11 T 13-10-2018 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 8.6E-39 T 13-10-2018 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 192 206 8.6E-39 T 13-10-2018 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 231 245 8.6E-39 T 13-10-2018 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 8.6E-39 T 13-10-2018 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 8.6E-39 T 13-10-2018 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 Gene3D G3DSA:3.50.30.20 4 152 2.4E-59 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 Pfam PF00117 Glutamine amidotransferase class-I 194 371 1.2E-49 T 13-10-2018 IPR017926 Glutamine amidotransferase Theam_0237 7b9799b2be134ed1fab5aa35ef196016 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 6 134 4.8E-53 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_0299 896e2d1551ad93aa5acd0637724c5251 126 Gene3D G3DSA:3.30.70.60 1 108 5.7E-32 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Theam_0299 896e2d1551ad93aa5acd0637724c5251 126 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 3 98 20.149 T 13-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Theam_0299 896e2d1551ad93aa5acd0637724c5251 126 Pfam PF01250 Ribosomal protein S6 6 95 6.5E-26 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0299 896e2d1551ad93aa5acd0637724c5251 126 SUPERFAMILY SSF54995 5 98 5.89E-31 T 13-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0299 896e2d1551ad93aa5acd0637724c5251 126 ProSitePatterns PS01048 Ribosomal protein S6 signature. 46 55 - T 13-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 Theam_0299 896e2d1551ad93aa5acd0637724c5251 126 TIGRFAM TIGR00166 S6: ribosomal protein bS6 6 96 2.1E-21 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1687 0bc564c85695390e953439ae7da34b7b 176 Gene3D G3DSA:3.30.1230.10 1 76 1.5E-8 T 13-10-2018 IPR035931 YlxR-like superfamily Theam_1687 0bc564c85695390e953439ae7da34b7b 176 Pfam PF04296 Protein of unknown function (DUF448) 2 55 2.2E-13 T 13-10-2018 IPR007393 Domain of unknown function DUF448 Theam_1687 0bc564c85695390e953439ae7da34b7b 176 SUPERFAMILY SSF55315 77 164 3.53E-6 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like Theam_1687 0bc564c85695390e953439ae7da34b7b 176 Gene3D G3DSA:3.30.1330.30 77 166 3.3E-6 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like Theam_1687 0bc564c85695390e953439ae7da34b7b 176 SUPERFAMILY SSF64376 1 61 7.98E-13 T 13-10-2018 IPR035931 YlxR-like superfamily Theam_1196 7b2324828db2f7c78d0f9d9b20f59365 292 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 15 282 4.6E-55 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Theam_1196 7b2324828db2f7c78d0f9d9b20f59365 292 SUPERFAMILY SSF52374 15 161 2.0E-19 T 13-10-2018 Theam_1196 7b2324828db2f7c78d0f9d9b20f59365 292 SUPERFAMILY SSF82114 150 283 3.27E-37 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Theam_1196 7b2324828db2f7c78d0f9d9b20f59365 292 Pfam PF06574 FAD synthetase 7 142 3.3E-19 T 13-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Theam_1196 7b2324828db2f7c78d0f9d9b20f59365 292 Gene3D G3DSA:2.40.30.30 164 291 9.4E-36 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Theam_1196 7b2324828db2f7c78d0f9d9b20f59365 292 PIRSF PIRSF004491 1 290 8.8E-74 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Theam_1196 7b2324828db2f7c78d0f9d9b20f59365 292 Pfam PF01687 Riboflavin kinase 160 281 1.2E-30 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Theam_1196 7b2324828db2f7c78d0f9d9b20f59365 292 SMART SM00904 159 283 1.9E-43 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Theam_1196 7b2324828db2f7c78d0f9d9b20f59365 292 Gene3D G3DSA:3.40.50.620 2 162 4.3E-31 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1594 cd4441c4e7f2c0e3d07f03a9634f2e91 184 Gene3D G3DSA:1.20.1260.10 32 169 2.2E-18 T 13-10-2018 IPR012347 Ferritin-like Theam_1594 cd4441c4e7f2c0e3d07f03a9634f2e91 184 Pfam PF00210 Ferritin-like domain 47 169 6.9E-7 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Theam_1594 cd4441c4e7f2c0e3d07f03a9634f2e91 184 SUPERFAMILY SSF47240 46 168 5.69E-18 T 13-10-2018 IPR009078 Ferritin-like superfamily Theam_0421 5f8904920ef385f656bf12eb86689c56 187 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 5 161 4.1E-25 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal Theam_0421 5f8904920ef385f656bf12eb86689c56 187 Gene3D G3DSA:1.10.3820.10 2 171 1.5E-38 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily Theam_0421 5f8904920ef385f656bf12eb86689c56 187 SUPERFAMILY SSF48695 21 161 1.59E-19 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_1124 8cb89386bc0b5fad9303746bdb65b678 177 PRINTS PR00446 Hydrogen uptake protein signature 57 67 4.7E-17 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Theam_1124 8cb89386bc0b5fad9303746bdb65b678 177 PRINTS PR00446 Hydrogen uptake protein signature 16 27 4.7E-17 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Theam_1124 8cb89386bc0b5fad9303746bdb65b678 177 PRINTS PR00446 Hydrogen uptake protein signature 4 16 4.7E-17 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Theam_1124 8cb89386bc0b5fad9303746bdb65b678 177 PRINTS PR00446 Hydrogen uptake protein signature 68 84 4.7E-17 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Theam_1124 8cb89386bc0b5fad9303746bdb65b678 177 PRINTS PR00446 Hydrogen uptake protein signature 36 53 4.7E-17 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Theam_1124 8cb89386bc0b5fad9303746bdb65b678 177 Pfam PF01750 Hydrogenase maturation protease 24 148 4.8E-28 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Theam_1124 8cb89386bc0b5fad9303746bdb65b678 177 SUPERFAMILY SSF53163 3 158 9.68E-40 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily Theam_1124 8cb89386bc0b5fad9303746bdb65b678 177 Gene3D G3DSA:3.40.50.1450 3 162 1.3E-39 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily Theam_1124 8cb89386bc0b5fad9303746bdb65b678 177 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 6 150 1.2E-40 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Theam_0136 3efc9fdff7d7c9689fadefa1cc1a3035 200 PRINTS PR00127 Clp protease catalytic subunit P signature 64 84 4.8E-56 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Theam_0136 3efc9fdff7d7c9689fadefa1cc1a3035 200 PRINTS PR00127 Clp protease catalytic subunit P signature 24 39 4.8E-56 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Theam_0136 3efc9fdff7d7c9689fadefa1cc1a3035 200 PRINTS PR00127 Clp protease catalytic subunit P signature 116 135 4.8E-56 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Theam_0136 3efc9fdff7d7c9689fadefa1cc1a3035 200 PRINTS PR00127 Clp protease catalytic subunit P signature 173 192 4.8E-56 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Theam_0136 3efc9fdff7d7c9689fadefa1cc1a3035 200 PRINTS PR00127 Clp protease catalytic subunit P signature 95 112 4.8E-56 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Theam_0136 3efc9fdff7d7c9689fadefa1cc1a3035 200 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 117 130 - T 13-10-2018 IPR033135 ClpP, histidine active site Theam_0136 3efc9fdff7d7c9689fadefa1cc1a3035 200 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 7 197 5.9E-109 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Theam_0136 3efc9fdff7d7c9689fadefa1cc1a3035 200 Gene3D G3DSA:3.90.226.10 1 199 1.1E-88 T 13-10-2018 Theam_0136 3efc9fdff7d7c9689fadefa1cc1a3035 200 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 8 198 46.196 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Theam_0136 3efc9fdff7d7c9689fadefa1cc1a3035 200 SUPERFAMILY SSF52096 15 197 1.43E-78 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Theam_0136 3efc9fdff7d7c9689fadefa1cc1a3035 200 Pfam PF00574 Clp protease 18 197 9.8E-93 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Theam_0136 3efc9fdff7d7c9689fadefa1cc1a3035 200 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 95 106 - T 13-10-2018 IPR018215 ClpP, Ser active site Theam_0098 4737285065f9b6b43b5cd5eaa41cdf90 281 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 4 277 1.2E-107 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Theam_0098 4737285065f9b6b43b5cd5eaa41cdf90 281 Hamap MF_00152 Probable endonuclease 4 [nfo]. 3 280 44.031 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Theam_0098 4737285065f9b6b43b5cd5eaa41cdf90 281 Gene3D G3DSA:3.20.20.150 2 280 3.0E-116 T 13-10-2018 Theam_0098 4737285065f9b6b43b5cd5eaa41cdf90 281 SUPERFAMILY SSF51658 4 280 2.36E-103 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily Theam_0098 4737285065f9b6b43b5cd5eaa41cdf90 281 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 176 183 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Theam_0098 4737285065f9b6b43b5cd5eaa41cdf90 281 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 70 78 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Theam_0098 4737285065f9b6b43b5cd5eaa41cdf90 281 Pfam PF01261 Xylose isomerase-like TIM barrel 22 240 3.0E-42 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Theam_0098 4737285065f9b6b43b5cd5eaa41cdf90 281 SMART SM00518 4 280 7.1E-129 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Theam_0098 4737285065f9b6b43b5cd5eaa41cdf90 281 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 216 232 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Theam_0988 6a1e5530703b758c0af6c49fb419e98f 316 Gene3D G3DSA:3.90.650.10 150 312 4.5E-42 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Theam_0988 6a1e5530703b758c0af6c49fb419e98f 316 Pfam PF02769 AIR synthase related protein, C-terminal domain 155 298 2.8E-10 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Theam_0988 6a1e5530703b758c0af6c49fb419e98f 316 SUPERFAMILY SSF55326 3 147 3.66E-27 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Theam_0988 6a1e5530703b758c0af6c49fb419e98f 316 SUPERFAMILY SSF56042 148 302 1.64E-29 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Theam_0988 6a1e5530703b758c0af6c49fb419e98f 316 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 144 7.2E-17 T 13-10-2018 IPR016188 PurM-like, N-terminal domain Theam_0988 6a1e5530703b758c0af6c49fb419e98f 316 Gene3D G3DSA:3.30.1330.10 1 146 1.1E-36 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Theam_0988 6a1e5530703b758c0af6c49fb419e98f 316 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 312 8.3E-78 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Theam_0988 6a1e5530703b758c0af6c49fb419e98f 316 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 312 26.562 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Theam_0988 6a1e5530703b758c0af6c49fb419e98f 316 PIRSF PIRSF005303 1 312 3.9E-82 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Theam_0358 75601e494a186d5d6bb4650f595325bd 443 Pfam PF05140 ResB-like family 12 277 2.4E-90 T 13-10-2018 IPR007816 ResB-like domain Theam_0358 75601e494a186d5d6bb4650f595325bd 443 Pfam PF05140 ResB-like family 337 422 1.1E-24 T 13-10-2018 IPR007816 ResB-like domain Theam_1252 40cb4d6147c50cc072fcd213e9efb82c 764 Gene3D G3DSA:3.10.20.310 188 277 5.0E-15 T 13-10-2018 Theam_1252 40cb4d6147c50cc072fcd213e9efb82c 764 Gene3D G3DSA:3.10.20.310 99 185 6.2E-13 T 13-10-2018 Theam_1252 40cb4d6147c50cc072fcd213e9efb82c 764 Pfam PF07244 Surface antigen variable number repeat 28 98 3.8E-9 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Theam_1252 40cb4d6147c50cc072fcd213e9efb82c 764 Pfam PF07244 Surface antigen variable number repeat 100 184 3.4E-7 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Theam_1252 40cb4d6147c50cc072fcd213e9efb82c 764 Pfam PF07244 Surface antigen variable number repeat 277 356 1.1E-12 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Theam_1252 40cb4d6147c50cc072fcd213e9efb82c 764 Pfam PF07244 Surface antigen variable number repeat 360 432 8.1E-14 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Theam_1252 40cb4d6147c50cc072fcd213e9efb82c 764 Pfam PF07244 Surface antigen variable number repeat 191 271 3.7E-9 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Theam_1252 40cb4d6147c50cc072fcd213e9efb82c 764 Gene3D G3DSA:3.10.20.310 278 358 1.2E-16 T 13-10-2018 Theam_1252 40cb4d6147c50cc072fcd213e9efb82c 764 Gene3D G3DSA:2.40.160.50 434 764 5.3E-76 T 13-10-2018 Theam_1252 40cb4d6147c50cc072fcd213e9efb82c 764 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 28 764 5.3E-164 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Theam_1252 40cb4d6147c50cc072fcd213e9efb82c 764 Gene3D G3DSA:3.10.20.310 359 432 1.6E-21 T 13-10-2018 Theam_1252 40cb4d6147c50cc072fcd213e9efb82c 764 Gene3D G3DSA:3.10.20.310 27 97 8.0E-15 T 13-10-2018 Theam_1252 40cb4d6147c50cc072fcd213e9efb82c 764 PIRSF PIRSF006076 1 764 2.5E-187 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Theam_1252 40cb4d6147c50cc072fcd213e9efb82c 764 Pfam PF01103 Surface antigen 459 764 3.7E-59 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 SUPERFAMILY SSF52540 5 414 6.07E-134 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 Pfam PF04851 Type III restriction enzyme, res subunit 11 87 1.7E-8 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 Gene3D G3DSA:3.30.2060.10 161 245 4.7E-18 T 13-10-2018 Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 659 43.861 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 Pfam PF12344 Ultra-violet resistance protein B 551 592 2.2E-22 T 13-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 Pfam PF02151 UvrB/uvrC motif 625 658 2.0E-9 T 13-10-2018 IPR001943 UVR domain GO:0005515 Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 Gene3D G3DSA:3.40.50.300 265 413 2.9E-53 T 13-10-2018 Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 Gene3D G3DSA:3.40.50.300 1 160 9.8E-69 T 13-10-2018 Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 SUPERFAMILY SSF52540 330 558 1.95E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 SMART SM00487 9 425 6.7E-26 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 Gene3D G3DSA:3.40.50.300 414 594 8.5E-54 T 13-10-2018 Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 657 0.0 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 Gene3D G3DSA:4.10.860.10 610 662 2.8E-10 T 13-10-2018 Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 SMART SM00490 459 545 4.7E-20 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 Pfam PF00271 Helicase conserved C-terminal domain 432 543 4.3E-20 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_0549 eadeceb14b61c0eed9a8a15feee718f3 663 SUPERFAMILY SSF46600 620 660 7.45E-12 T 13-10-2018 IPR036876 UVR domain superfamily Theam_0863 742b45f172cb6f31cc375e1b9aa5a73c 388 SUPERFAMILY SSF111369 137 190 2.09E-5 T 13-10-2018 Theam_0863 742b45f172cb6f31cc375e1b9aa5a73c 388 Gene3D G3DSA:2.40.30.170 292 385 1.1E-12 T 13-10-2018 Theam_0863 742b45f172cb6f31cc375e1b9aa5a73c 388 SUPERFAMILY SSF51230 26 72 1.06E-6 T 13-10-2018 IPR011053 Single hybrid motif Theam_0863 742b45f172cb6f31cc375e1b9aa5a73c 388 SUPERFAMILY SSF111369 196 380 1.44E-7 T 13-10-2018 Theam_0863 742b45f172cb6f31cc375e1b9aa5a73c 388 Pfam PF13533 Biotin-lipoyl like 37 80 1.8E-9 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Theam_0863 742b45f172cb6f31cc375e1b9aa5a73c 388 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 250 377 3.7E-16 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Theam_0863 742b45f172cb6f31cc375e1b9aa5a73c 388 Gene3D G3DSA:1.10.287.470 125 213 3.7E-12 T 13-10-2018 Theam_0863 742b45f172cb6f31cc375e1b9aa5a73c 388 Gene3D G3DSA:1.10.287.470 67 108 1.1E-12 T 13-10-2018 Theam_0863 742b45f172cb6f31cc375e1b9aa5a73c 388 Gene3D G3DSA:2.40.50.100 33 66 1.1E-12 T 13-10-2018 Theam_0863 742b45f172cb6f31cc375e1b9aa5a73c 388 Gene3D G3DSA:2.40.50.100 242 291 4.7E-9 T 13-10-2018 Theam_0863 742b45f172cb6f31cc375e1b9aa5a73c 388 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 45 65 1.1E-12 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Theam_0863 742b45f172cb6f31cc375e1b9aa5a73c 388 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 275 296 1.1E-12 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Theam_0863 742b45f172cb6f31cc375e1b9aa5a73c 388 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 331 1.1E-12 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Theam_0863 742b45f172cb6f31cc375e1b9aa5a73c 388 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 373 388 1.1E-12 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Theam_0491 79e307d2b27b0e9daa907b18aba0a1d7 304 SUPERFAMILY SSF55681 3 291 2.59E-58 T 13-10-2018 Theam_0491 79e307d2b27b0e9daa907b18aba0a1d7 304 Gene3D G3DSA:3.30.930.10 1 295 2.0E-69 T 13-10-2018 Theam_0491 79e307d2b27b0e9daa907b18aba0a1d7 304 Pfam PF00152 tRNA synthetases class II (D, K and N) 3 293 1.7E-35 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_0491 79e307d2b27b0e9daa907b18aba0a1d7 304 PRINTS PR00982 Lysyl-tRNA synthetase signature 20 30 7.8E-7 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Theam_0491 79e307d2b27b0e9daa907b18aba0a1d7 304 PRINTS PR00982 Lysyl-tRNA synthetase signature 69 82 7.8E-7 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Theam_0491 79e307d2b27b0e9daa907b18aba0a1d7 304 PRINTS PR00982 Lysyl-tRNA synthetase signature 87 104 7.8E-7 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Theam_1366 e3f5fe3952b429464750204b5b76ad5f 175 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 6 168 1.2E-53 T 13-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 Theam_1366 e3f5fe3952b429464750204b5b76ad5f 175 Pfam PF00156 Phosphoribosyl transferase domain 9 153 4.4E-24 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Theam_1366 e3f5fe3952b429464750204b5b76ad5f 175 SUPERFAMILY SSF53271 5 170 1.01E-49 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Theam_1366 e3f5fe3952b429464750204b5b76ad5f 175 Gene3D G3DSA:3.40.50.2020 2 174 5.1E-62 T 13-10-2018 Theam_1404 dfd135cf3c1a5c1c61f88cf1c26e3071 248 SUPERFAMILY SSF52343 92 247 4.71E-30 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Theam_1404 dfd135cf3c1a5c1c61f88cf1c26e3071 248 Pfam PF00175 Oxidoreductase NAD-binding domain 106 195 2.8E-4 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Theam_1404 dfd135cf3c1a5c1c61f88cf1c26e3071 248 SUPERFAMILY SSF63380 3 95 3.05E-16 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Theam_1404 dfd135cf3c1a5c1c61f88cf1c26e3071 248 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 211 246 1.9E-15 T 13-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Theam_1404 dfd135cf3c1a5c1c61f88cf1c26e3071 248 Gene3D G3DSA:2.40.30.10 1 95 1.7E-23 T 13-10-2018 Theam_1404 dfd135cf3c1a5c1c61f88cf1c26e3071 248 Gene3D G3DSA:2.10.240.10 210 248 1.4E-12 T 13-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily Theam_1404 dfd135cf3c1a5c1c61f88cf1c26e3071 248 Gene3D G3DSA:3.40.50.80 97 209 3.2E-21 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Theam_1404 dfd135cf3c1a5c1c61f88cf1c26e3071 248 PIRSF PIRSF006816 1 248 1.1E-59 T 13-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 Theam_0190 fc6da15a723707b747faa80a126f493f 431 Pfam PF01842 ACT domain 348 412 1.9E-11 T 13-10-2018 IPR002912 ACT domain Theam_0190 fc6da15a723707b747faa80a126f493f 431 SUPERFAMILY SSF51735 4 157 3.38E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0190 fc6da15a723707b747faa80a126f493f 431 Gene3D G3DSA:3.30.360.10 135 341 7.6E-159 T 13-10-2018 Theam_0190 fc6da15a723707b747faa80a126f493f 431 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 182 204 - T 13-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Theam_0190 fc6da15a723707b747faa80a126f493f 431 Gene3D G3DSA:3.30.70.260 342 415 7.6E-159 T 13-10-2018 Theam_0190 fc6da15a723707b747faa80a126f493f 431 SUPERFAMILY SSF55021 346 415 4.82E-12 T 13-10-2018 Theam_0190 fc6da15a723707b747faa80a126f493f 431 Pfam PF00742 Homoserine dehydrogenase 136 315 1.8E-64 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Theam_0190 fc6da15a723707b747faa80a126f493f 431 SUPERFAMILY SSF55347 136 302 3.4E-53 T 13-10-2018 Theam_0190 fc6da15a723707b747faa80a126f493f 431 Gene3D G3DSA:3.40.50.720 5 336 7.6E-159 T 13-10-2018 Theam_0190 fc6da15a723707b747faa80a126f493f 431 PIRSF PIRSF000098 1 427 1.5E-153 T 13-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Theam_0190 fc6da15a723707b747faa80a126f493f 431 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 128 7.6E-18 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Theam_0459 20824d430e87a8477608ec9c2e5b65af 335 Gene3D G3DSA:1.10.3730.40 182 334 2.1E-74 T 13-10-2018 Theam_0459 20824d430e87a8477608ec9c2e5b65af 335 SUPERFAMILY SSF48179 183 329 1.7E-72 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Theam_0459 20824d430e87a8477608ec9c2e5b65af 335 PIRSF PIRSF000116 201 332 2.5E-18 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Theam_0459 20824d430e87a8477608ec9c2e5b65af 335 PIRSF PIRSF000116 1 205 2.9E-44 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Theam_0459 20824d430e87a8477608ec9c2e5b65af 335 SUPERFAMILY SSF51735 3 182 3.48E-77 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0459 20824d430e87a8477608ec9c2e5b65af 335 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 327 2.8E-147 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Theam_0459 20824d430e87a8477608ec9c2e5b65af 335 Gene3D G3DSA:3.40.50.720 1 181 2.2E-83 T 13-10-2018 Theam_0459 20824d430e87a8477608ec9c2e5b65af 335 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 177 1.9E-80 T 13-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Theam_0459 20824d430e87a8477608ec9c2e5b65af 335 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 325 1.3E-68 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Theam_0459 20824d430e87a8477608ec9c2e5b65af 335 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 328 46.77 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Theam_0665 8227bf67a47a77e5382fe94c56e53807 202 SUPERFAMILY SSF52540 21 192 7.41E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0665 8227bf67a47a77e5382fe94c56e53807 202 Gene3D G3DSA:3.40.50.300 6 201 1.9E-87 T 13-10-2018 Theam_0665 8227bf67a47a77e5382fe94c56e53807 202 Pfam PF01583 Adenylylsulphate kinase 25 179 3.3E-77 T 13-10-2018 Theam_0665 8227bf67a47a77e5382fe94c56e53807 202 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 12 192 4.4E-90 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Theam_0665 8227bf67a47a77e5382fe94c56e53807 202 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 24 196 41.217 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Theam_1174 a63b6e673bfd38c9416cd5cb06e83fb6 462 PIRSF PIRSF000485 1 462 1.7E-180 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Theam_1174 a63b6e673bfd38c9416cd5cb06e83fb6 462 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 5 448 2.7E-169 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Theam_1174 a63b6e673bfd38c9416cd5cb06e83fb6 462 SUPERFAMILY SSF56235 5 248 3.86E-70 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Theam_1174 a63b6e673bfd38c9416cd5cb06e83fb6 462 Gene3D G3DSA:3.40.50.2020 266 430 2.8E-169 T 13-10-2018 Theam_1174 a63b6e673bfd38c9416cd5cb06e83fb6 462 Gene3D G3DSA:3.60.20.10 5 449 2.8E-169 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Theam_1174 a63b6e673bfd38c9416cd5cb06e83fb6 462 Pfam PF00156 Phosphoribosyl transferase domain 272 376 1.1E-9 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Theam_1174 a63b6e673bfd38c9416cd5cb06e83fb6 462 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 4 447 47.579 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Theam_1174 a63b6e673bfd38c9416cd5cb06e83fb6 462 SUPERFAMILY SSF53271 242 456 2.02E-75 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Theam_1174 a63b6e673bfd38c9416cd5cb06e83fb6 462 Pfam PF13537 Glutamine amidotransferase domain 75 202 2.5E-24 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Theam_1223 523976bfe8b1d857cb9d2197123a2a9a 304 Gene3D G3DSA:3.10.620.30 90 250 4.8E-25 T 13-10-2018 Theam_1223 523976bfe8b1d857cb9d2197123a2a9a 304 SUPERFAMILY SSF54001 116 244 4.21E-24 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Theam_1223 523976bfe8b1d857cb9d2197123a2a9a 304 SMART SM00460 174 236 1.3E-9 T 13-10-2018 IPR002931 Transglutaminase-like Theam_1223 523976bfe8b1d857cb9d2197123a2a9a 304 Pfam PF01841 Transglutaminase-like superfamily 129 224 1.2E-23 T 13-10-2018 IPR002931 Transglutaminase-like Theam_0466 5ae5efd39846ecad37b8d9de2abdd230 432 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 408 415 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Theam_0466 5ae5efd39846ecad37b8d9de2abdd230 432 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 9 51 8.5E-10 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Theam_0466 5ae5efd39846ecad37b8d9de2abdd230 432 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 427 4.0E-106 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Theam_0466 5ae5efd39846ecad37b8d9de2abdd230 432 Pfam PF04552 Sigma-54, DNA binding domain 276 427 1.9E-51 T 13-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding Theam_0466 5ae5efd39846ecad37b8d9de2abdd230 432 Gene3D G3DSA:1.10.10.60 370 428 4.7E-26 T 13-10-2018 Theam_0466 5ae5efd39846ecad37b8d9de2abdd230 432 Pfam PF04963 Sigma-54 factor, core binding domain 91 265 2.1E-29 T 13-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 Theam_0466 5ae5efd39846ecad37b8d9de2abdd230 432 Gene3D G3DSA:1.10.10.1330 91 219 6.6E-23 T 13-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Theam_0466 5ae5efd39846ecad37b8d9de2abdd230 432 PIRSF PIRSF000774 1 430 3.2E-100 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Theam_0466 5ae5efd39846ecad37b8d9de2abdd230 432 PRINTS PR00045 Sigma-54 factor signature 334 346 7.9E-22 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Theam_0466 5ae5efd39846ecad37b8d9de2abdd230 432 PRINTS PR00045 Sigma-54 factor signature 157 174 7.9E-22 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Theam_0466 5ae5efd39846ecad37b8d9de2abdd230 432 PRINTS PR00045 Sigma-54 factor signature 350 361 7.9E-22 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Theam_0466 5ae5efd39846ecad37b8d9de2abdd230 432 PRINTS PR00045 Sigma-54 factor signature 403 421 7.9E-22 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Theam_0800 40459244549938122624287deb7e003d 829 SUPERFAMILY SSF88723 1 169 2.75E-53 T 13-10-2018 IPR029060 PIN-like domain superfamily Theam_0800 40459244549938122624287deb7e003d 829 SUPERFAMILY SSF56672 429 828 7.56E-144 T 13-10-2018 Theam_0800 40459244549938122624287deb7e003d 829 Pfam PF00476 DNA polymerase family A 460 828 1.4E-142 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_0800 40459244549938122624287deb7e003d 829 Gene3D G3DSA:3.30.70.370 570 828 1.6E-105 T 13-10-2018 Theam_0800 40459244549938122624287deb7e003d 829 SUPERFAMILY SSF47807 170 284 1.12E-30 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Theam_0800 40459244549938122624287deb7e003d 829 SMART SM00279 172 207 7.0E-16 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Theam_0800 40459244549938122624287deb7e003d 829 Gene3D G3DSA:3.40.50.1010 5 275 7.7E-96 T 13-10-2018 Theam_0800 40459244549938122624287deb7e003d 829 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 170 263 3.4E-30 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Theam_0800 40459244549938122624287deb7e003d 829 ProSitePatterns PS00447 DNA polymerase family A signature. 660 679 - T 13-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_0800 40459244549938122624287deb7e003d 829 Gene3D G3DSA:1.10.150.20 173 245 7.7E-96 T 13-10-2018 Theam_0800 40459244549938122624287deb7e003d 829 PRINTS PR00868 DNA-polymerase family A (pol I) signature 586 601 1.7E-68 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_0800 40459244549938122624287deb7e003d 829 PRINTS PR00868 DNA-polymerase family A (pol I) signature 697 708 1.7E-68 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_0800 40459244549938122624287deb7e003d 829 PRINTS PR00868 DNA-polymerase family A (pol I) signature 563 585 1.7E-68 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_0800 40459244549938122624287deb7e003d 829 PRINTS PR00868 DNA-polymerase family A (pol I) signature 608 631 1.7E-68 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_0800 40459244549938122624287deb7e003d 829 PRINTS PR00868 DNA-polymerase family A (pol I) signature 719 730 1.7E-68 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_0800 40459244549938122624287deb7e003d 829 PRINTS PR00868 DNA-polymerase family A (pol I) signature 638 651 1.7E-68 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_0800 40459244549938122624287deb7e003d 829 PRINTS PR00868 DNA-polymerase family A (pol I) signature 660 685 1.7E-68 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_0800 40459244549938122624287deb7e003d 829 PRINTS PR00868 DNA-polymerase family A (pol I) signature 779 792 1.7E-68 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_0800 40459244549938122624287deb7e003d 829 PRINTS PR00868 DNA-polymerase family A (pol I) signature 751 767 1.7E-68 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_0800 40459244549938122624287deb7e003d 829 SMART SM00475 2 260 2.2E-131 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Theam_0800 40459244549938122624287deb7e003d 829 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 168 4.0E-51 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Theam_0800 40459244549938122624287deb7e003d 829 Gene3D G3DSA:3.30.420.10 345 451 4.8E-7 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Theam_0800 40459244549938122624287deb7e003d 829 SMART SM00482 594 796 6.3E-102 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_0800 40459244549938122624287deb7e003d 829 Gene3D G3DSA:1.20.1060.10 452 565 4.3E-35 T 13-10-2018 Theam_0800 40459244549938122624287deb7e003d 829 Gene3D G3DSA:1.10.150.20 617 758 1.6E-105 T 13-10-2018 Theam_1576 6fbbf0da89edaa2f0452c479ad185000 247 Pfam PF00194 Eukaryotic-type carbonic anhydrase 25 246 6.0E-59 T 13-10-2018 IPR001148 Alpha carbonic anhydrase domain Theam_1576 6fbbf0da89edaa2f0452c479ad185000 247 SMART SM01057 26 246 1.1E-109 T 13-10-2018 IPR001148 Alpha carbonic anhydrase domain Theam_1576 6fbbf0da89edaa2f0452c479ad185000 247 SUPERFAMILY SSF51069 25 245 3.4E-84 T 13-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Theam_1576 6fbbf0da89edaa2f0452c479ad185000 247 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 117 133 - T 13-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 Theam_1576 6fbbf0da89edaa2f0452c479ad185000 247 Gene3D G3DSA:3.10.200.10 22 247 2.9E-104 T 13-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Theam_0374 0e2acda239fdecaf42eac48b146c7354 406 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 401 2.3E-133 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Theam_0374 0e2acda239fdecaf42eac48b146c7354 406 PIRSF PIRSF000726 55 406 9.8E-144 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Theam_0374 0e2acda239fdecaf42eac48b146c7354 406 PIRSF PIRSF000726 1 60 2.8E-22 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Theam_0374 0e2acda239fdecaf42eac48b146c7354 406 Pfam PF00696 Amino acid kinase family 3 230 4.5E-53 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Theam_0374 0e2acda239fdecaf42eac48b146c7354 406 SUPERFAMILY SSF53633 4 242 2.36E-80 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Theam_0374 0e2acda239fdecaf42eac48b146c7354 406 Gene3D G3DSA:3.30.70.260 254 402 2.4E-62 T 13-10-2018 Theam_0374 0e2acda239fdecaf42eac48b146c7354 406 Pfam PF13840 ACT domain 336 398 1.4E-14 T 13-10-2018 IPR027795 CASTOR, ACT domain Theam_0374 0e2acda239fdecaf42eac48b146c7354 406 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Theam_0374 0e2acda239fdecaf42eac48b146c7354 406 SUPERFAMILY SSF55021 327 403 2.71E-25 T 13-10-2018 Theam_0374 0e2acda239fdecaf42eac48b146c7354 406 Gene3D G3DSA:3.30.70.260 260 337 2.4E-62 T 13-10-2018 Theam_0374 0e2acda239fdecaf42eac48b146c7354 406 SUPERFAMILY SSF55021 247 325 3.06E-21 T 13-10-2018 Theam_0374 0e2acda239fdecaf42eac48b146c7354 406 Gene3D G3DSA:3.40.1160.10 1 253 2.8E-99 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Theam_0374 0e2acda239fdecaf42eac48b146c7354 406 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 401 2.1E-149 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Theam_0374 0e2acda239fdecaf42eac48b146c7354 406 Pfam PF01842 ACT domain 266 325 3.1E-12 T 13-10-2018 IPR002912 ACT domain Theam_0864 a15be735cb0d0a0b0aecb49494c1e048 613 SUPERFAMILY SSF52540 319 536 2.15E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0864 a15be735cb0d0a0b0aecb49494c1e048 613 SUPERFAMILY SSF52540 4 228 1.09E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0864 a15be735cb0d0a0b0aecb49494c1e048 613 Gene3D G3DSA:3.40.50.300 1 244 2.0E-55 T 13-10-2018 Theam_0864 a15be735cb0d0a0b0aecb49494c1e048 613 Gene3D G3DSA:3.40.50.300 310 544 3.3E-65 T 13-10-2018 Theam_0864 a15be735cb0d0a0b0aecb49494c1e048 613 SMART SM00382 30 216 6.2E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0864 a15be735cb0d0a0b0aecb49494c1e048 613 SMART SM00382 343 531 1.3E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0864 a15be735cb0d0a0b0aecb49494c1e048 613 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Theam_0864 a15be735cb0d0a0b0aecb49494c1e048 613 Pfam PF00005 ABC transporter 22 168 2.7E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_0864 a15be735cb0d0a0b0aecb49494c1e048 613 Pfam PF00005 ABC transporter 335 475 8.0E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_1625 c12de879bf7fc1abc171b9ebcbf54f86 258 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Theam_1625 c12de879bf7fc1abc171b9ebcbf54f86 258 Pfam PF00005 ABC transporter 18 166 1.7E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_1625 c12de879bf7fc1abc171b9ebcbf54f86 258 SMART SM00382 27 216 3.6E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1625 c12de879bf7fc1abc171b9ebcbf54f86 258 SUPERFAMILY SSF52540 9 229 7.56E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1625 c12de879bf7fc1abc171b9ebcbf54f86 258 Gene3D G3DSA:3.40.50.300 4 251 2.9E-57 T 13-10-2018 Theam_1013 02559f85c111405b2bbae7bacb9a23ed 193 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 4.4E-7 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Theam_1013 02559f85c111405b2bbae7bacb9a23ed 193 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 4.4E-7 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Theam_1013 02559f85c111405b2bbae7bacb9a23ed 193 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 4.4E-7 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Theam_1013 02559f85c111405b2bbae7bacb9a23ed 193 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 4.4E-7 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Theam_1013 02559f85c111405b2bbae7bacb9a23ed 193 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 118 1.5E-8 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Theam_1013 02559f85c111405b2bbae7bacb9a23ed 193 SUPERFAMILY SSF51905 2 182 2.24E-22 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1013 02559f85c111405b2bbae7bacb9a23ed 193 Gene3D G3DSA:3.50.50.60 2 183 7.1E-28 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1389 22911c9b3bfb2fc438f9ada7004de3c2 310 Gene3D G3DSA:3.20.20.70 4 308 2.4E-96 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1389 22911c9b3bfb2fc438f9ada7004de3c2 310 SMART SM00729 39 245 5.8E-31 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_1389 22911c9b3bfb2fc438f9ada7004de3c2 310 Pfam PF04055 Radical SAM superfamily 48 204 6.5E-13 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_1389 22911c9b3bfb2fc438f9ada7004de3c2 310 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 216 304 8.0E-15 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Theam_1389 22911c9b3bfb2fc438f9ada7004de3c2 310 TIGRFAM TIGR00433 bioB: biotin synthase 18 304 1.0E-103 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Theam_1389 22911c9b3bfb2fc438f9ada7004de3c2 310 SMART SM00876 216 306 4.2E-28 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Theam_1389 22911c9b3bfb2fc438f9ada7004de3c2 310 Hamap MF_01694 Biotin synthase [bioB]. 1 307 38.645 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Theam_1389 22911c9b3bfb2fc438f9ada7004de3c2 310 PIRSF PIRSF001619 2 309 3.0E-98 T 13-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Theam_1389 22911c9b3bfb2fc438f9ada7004de3c2 310 SUPERFAMILY SSF102114 18 304 1.44E-61 T 13-10-2018 Theam_0238 ae9220e1820bf5563090ab7dc6afe2cf 279 Pfam PF01297 Zinc-uptake complex component A periplasmic 28 264 6.1E-41 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Theam_0238 ae9220e1820bf5563090ab7dc6afe2cf 279 Gene3D G3DSA:3.40.50.1980 174 275 4.5E-17 T 13-10-2018 Theam_0238 ae9220e1820bf5563090ab7dc6afe2cf 279 SUPERFAMILY SSF53807 24 274 1.23E-51 T 13-10-2018 Theam_0238 ae9220e1820bf5563090ab7dc6afe2cf 279 PRINTS PR00690 Adhesin family signature 56 69 4.8E-6 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Theam_0238 ae9220e1820bf5563090ab7dc6afe2cf 279 PRINTS PR00690 Adhesin family signature 25 43 4.8E-6 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Theam_0238 ae9220e1820bf5563090ab7dc6afe2cf 279 PRINTS PR00690 Adhesin family signature 69 86 4.8E-6 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Theam_0238 ae9220e1820bf5563090ab7dc6afe2cf 279 Gene3D G3DSA:3.40.50.1980 27 168 9.8E-25 T 13-10-2018 Theam_1799 739337a7cdb464e1fa5b33ae1d653015 404 SMART SM00382 171 297 0.0052 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1799 739337a7cdb464e1fa5b33ae1d653015 404 SUPERFAMILY SSF52540 112 386 4.33E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1799 739337a7cdb464e1fa5b33ae1d653015 404 Gene3D G3DSA:3.40.50.300 151 403 5.1E-77 T 13-10-2018 Theam_1799 739337a7cdb464e1fa5b33ae1d653015 404 Pfam PF00437 Type II/IV secretion system protein 171 314 2.4E-30 T 13-10-2018 IPR001482 Type II/IV secretion system protein Theam_0163 94b54c3583d7338217fefe810dcf9617 476 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 160 469 1.9E-122 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Theam_0163 94b54c3583d7338217fefe810dcf9617 476 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 34 131 3.5E-20 T 13-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Theam_0163 94b54c3583d7338217fefe810dcf9617 476 Gene3D G3DSA:3.40.630.10 142 476 2.0E-140 T 13-10-2018 Theam_0163 94b54c3583d7338217fefe810dcf9617 476 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 321 328 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Theam_0163 94b54c3583d7338217fefe810dcf9617 476 SUPERFAMILY SSF53187 156 473 4.08E-116 T 13-10-2018 Theam_0163 94b54c3583d7338217fefe810dcf9617 476 SUPERFAMILY SSF52949 1 158 1.94E-23 T 13-10-2018 Theam_0163 94b54c3583d7338217fefe810dcf9617 476 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 476 35.297 T 13-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 Theam_0163 94b54c3583d7338217fefe810dcf9617 476 Gene3D G3DSA:3.40.220.10 1 141 1.7E-25 T 13-10-2018 Theam_0163 94b54c3583d7338217fefe810dcf9617 476 PRINTS PR00481 Cytosol aminopeptidase signature 236 253 1.4E-50 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Theam_0163 94b54c3583d7338217fefe810dcf9617 476 PRINTS PR00481 Cytosol aminopeptidase signature 345 360 1.4E-50 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Theam_0163 94b54c3583d7338217fefe810dcf9617 476 PRINTS PR00481 Cytosol aminopeptidase signature 295 316 1.4E-50 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Theam_0163 94b54c3583d7338217fefe810dcf9617 476 PRINTS PR00481 Cytosol aminopeptidase signature 258 279 1.4E-50 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Theam_0163 94b54c3583d7338217fefe810dcf9617 476 PRINTS PR00481 Cytosol aminopeptidase signature 317 337 1.4E-50 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Theam_0185 b58371e56364c88877e52144370fbac0 138 SMART SM00930 4 76 1.4E-9 T 13-10-2018 IPR018449 NIL domain Theam_0185 b58371e56364c88877e52144370fbac0 138 Pfam PF09383 NIL domain 7 73 5.7E-11 T 13-10-2018 IPR018449 NIL domain Theam_0185 b58371e56364c88877e52144370fbac0 138 Gene3D G3DSA:3.30.70.20 76 107 2.2E-5 T 13-10-2018 Theam_0185 b58371e56364c88877e52144370fbac0 138 SUPERFAMILY SSF55021 3 76 1.37E-12 T 13-10-2018 Theam_0185 b58371e56364c88877e52144370fbac0 138 Gene3D G3DSA:3.30.70.260 2 75 6.9E-10 T 13-10-2018 Theam_0185 b58371e56364c88877e52144370fbac0 138 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 118 129 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0185 b58371e56364c88877e52144370fbac0 138 Gene3D G3DSA:3.30.70.20 108 138 1.6E-6 T 13-10-2018 Theam_0185 b58371e56364c88877e52144370fbac0 138 Pfam PF12838 4Fe-4S dicluster domain 86 130 4.5E-11 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_0185 b58371e56364c88877e52144370fbac0 138 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0185 b58371e56364c88877e52144370fbac0 138 SUPERFAMILY SSF54862 80 135 1.14E-21 T 13-10-2018 Theam_0613 e85713950ad8b40e944efede48bb6cce 188 TIGRFAM TIGR00172 maf: septum formation protein Maf 5 183 1.5E-46 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Theam_0613 e85713950ad8b40e944efede48bb6cce 188 Gene3D G3DSA:3.90.950.10 5 187 5.9E-60 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Theam_0613 e85713950ad8b40e944efede48bb6cce 188 Hamap MF_00528 Septum formation protein Maf [maf]. 6 187 26.896 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Theam_0613 e85713950ad8b40e944efede48bb6cce 188 PIRSF PIRSF006305 1 188 1.5E-49 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Theam_0613 e85713950ad8b40e944efede48bb6cce 188 SUPERFAMILY SSF52972 4 183 2.88E-53 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Theam_0613 e85713950ad8b40e944efede48bb6cce 188 Pfam PF02545 Maf-like protein 6 184 9.4E-51 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Theam_0811 f1836aa8af0ce37e407ac98685edb520 1004 SUPERFAMILY SSF48452 135 315 1.12E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0811 f1836aa8af0ce37e407ac98685edb520 1004 Pfam PF13429 Tetratricopeptide repeat 290 552 3.7E-42 T 13-10-2018 Theam_0811 f1836aa8af0ce37e407ac98685edb520 1004 Gene3D G3DSA:1.25.40.10 321 555 2.6E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1678 14ebb0a40cd3ebdcbdb03591a25af9b7 351 Hamap MF_00268 Protein RecA [recA]. 16 343 49.157 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Theam_1678 14ebb0a40cd3ebdcbdb03591a25af9b7 351 SUPERFAMILY SSF54752 282 340 1.05E-19 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Theam_1678 14ebb0a40cd3ebdcbdb03591a25af9b7 351 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 15 337 1.1E-156 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Theam_1678 14ebb0a40cd3ebdcbdb03591a25af9b7 351 ProSitePatterns PS00321 recA signature. 226 234 - T 13-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Theam_1678 14ebb0a40cd3ebdcbdb03591a25af9b7 351 Gene3D G3DSA:3.30.250.10 282 351 7.3E-26 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Theam_1678 14ebb0a40cd3ebdcbdb03591a25af9b7 351 SUPERFAMILY SSF52540 18 281 1.53E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1678 14ebb0a40cd3ebdcbdb03591a25af9b7 351 PRINTS PR00142 RecA protein signature 176 205 2.6E-83 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Theam_1678 14ebb0a40cd3ebdcbdb03591a25af9b7 351 PRINTS PR00142 RecA protein signature 138 167 2.6E-83 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Theam_1678 14ebb0a40cd3ebdcbdb03591a25af9b7 351 PRINTS PR00142 RecA protein signature 223 251 2.6E-83 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Theam_1678 14ebb0a40cd3ebdcbdb03591a25af9b7 351 PRINTS PR00142 RecA protein signature 257 286 2.6E-83 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Theam_1678 14ebb0a40cd3ebdcbdb03591a25af9b7 351 PRINTS PR00142 RecA protein signature 311 328 2.6E-83 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Theam_1678 14ebb0a40cd3ebdcbdb03591a25af9b7 351 PRINTS PR00142 RecA protein signature 104 133 2.6E-83 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Theam_1678 14ebb0a40cd3ebdcbdb03591a25af9b7 351 SMART SM00382 68 241 2.7E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1678 14ebb0a40cd3ebdcbdb03591a25af9b7 351 Gene3D G3DSA:3.40.50.300 37 281 4.8E-79 T 13-10-2018 Theam_1678 14ebb0a40cd3ebdcbdb03591a25af9b7 351 Pfam PF00154 recA bacterial DNA recombination protein 18 282 6.1E-129 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Theam_1250 6b2b54a0471f5d7ecc48fce4b35fb5af 336 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 20 84 9.4E-23 T 13-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 Theam_1250 6b2b54a0471f5d7ecc48fce4b35fb5af 336 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 2 323 37.082 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Theam_1250 6b2b54a0471f5d7ecc48fce4b35fb5af 336 SUPERFAMILY SSF51161 31 312 2.21E-85 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Theam_1250 6b2b54a0471f5d7ecc48fce4b35fb5af 336 Gene3D G3DSA:2.160.10.10 95 304 5.1E-64 T 13-10-2018 Theam_1250 6b2b54a0471f5d7ecc48fce4b35fb5af 336 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 5 326 1.2E-120 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Theam_1250 6b2b54a0471f5d7ecc48fce4b35fb5af 336 Gene3D G3DSA:3.40.1390.10 1 94 8.5E-30 T 13-10-2018 Theam_1250 6b2b54a0471f5d7ecc48fce4b35fb5af 336 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 141 175 8.7E-7 T 13-10-2018 IPR001451 Hexapeptide repeat Theam_1250 6b2b54a0471f5d7ecc48fce4b35fb5af 336 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 220 255 7.1E-10 T 13-10-2018 IPR001451 Hexapeptide repeat Theam_1250 6b2b54a0471f5d7ecc48fce4b35fb5af 336 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 99 131 5.2E-8 T 13-10-2018 IPR001451 Hexapeptide repeat Theam_0774 65d845e650a9bf6acd9b7e1446d7f34f 148 Gene3D G3DSA:3.40.140.10 2 148 5.6E-49 T 13-10-2018 Theam_0774 65d845e650a9bf6acd9b7e1446d7f34f 148 PIRSF PIRSF006019 2 148 1.8E-56 T 13-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Theam_0774 65d845e650a9bf6acd9b7e1446d7f34f 148 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 78 113 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Theam_0774 65d845e650a9bf6acd9b7e1446d7f34f 148 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 124 5.0E-30 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Theam_0774 65d845e650a9bf6acd9b7e1446d7f34f 148 SUPERFAMILY SSF53927 7 146 8.53E-43 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Theam_1489 b0136aa05ebe9c811c9cf368b330cee4 483 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 161 185 1.2E-36 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1489 b0136aa05ebe9c811c9cf368b330cee4 483 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 131 150 1.2E-36 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1489 b0136aa05ebe9c811c9cf368b330cee4 483 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 370 396 1.2E-36 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1489 b0136aa05ebe9c811c9cf368b330cee4 483 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 230 254 1.2E-36 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1489 b0136aa05ebe9c811c9cf368b330cee4 483 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 318 337 1.2E-36 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1489 b0136aa05ebe9c811c9cf368b330cee4 483 Pfam PF00361 Proton-conducting membrane transporter 125 411 8.8E-77 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1489 b0136aa05ebe9c811c9cf368b330cee4 483 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 5 479 1.1E-138 T 13-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1403 af2307985f32d6fffed9623b0004b402 69 Gene3D G3DSA:3.90.940.10 3 69 9.3E-12 T 13-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Theam_1403 af2307985f32d6fffed9623b0004b402 69 SMART SM01409 9 65 6.1E-10 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Theam_1403 af2307985f32d6fffed9623b0004b402 69 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 3 63 7.7E-12 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1403 af2307985f32d6fffed9623b0004b402 69 Pfam PF01192 RNA polymerase Rpb6 10 63 4.4E-12 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Theam_1403 af2307985f32d6fffed9623b0004b402 69 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 2 66 10.612 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_1403 af2307985f32d6fffed9623b0004b402 69 SUPERFAMILY SSF63562 6 66 5.58E-11 T 13-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Theam_1369 399d01fa34088991db59598a55763ec2 436 Pfam PF05697 Bacterial trigger factor protein (TF) 1 146 7.4E-31 T 13-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Theam_1369 399d01fa34088991db59598a55763ec2 436 SUPERFAMILY SSF109998 249 431 6.93E-37 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Theam_1369 399d01fa34088991db59598a55763ec2 436 Gene3D G3DSA:1.10.3120.10 117 421 1.9E-67 T 13-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Theam_1369 399d01fa34088991db59598a55763ec2 436 Hamap MF_00303 Trigger factor [tig]. 1 422 18.156 T 13-10-2018 IPR005215 Trigger factor GO:0015031 Theam_1369 399d01fa34088991db59598a55763ec2 436 SUPERFAMILY SSF102735 1 131 3.92E-26 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Theam_1369 399d01fa34088991db59598a55763ec2 436 SUPERFAMILY SSF54534 135 248 3.14E-14 T 13-10-2018 Theam_1369 399d01fa34088991db59598a55763ec2 436 Gene3D G3DSA:3.30.70.1050 1 116 4.0E-25 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Theam_1369 399d01fa34088991db59598a55763ec2 436 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 261 417 6.9E-28 T 13-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Theam_1369 399d01fa34088991db59598a55763ec2 436 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 231 1.8E-4 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Theam_1369 399d01fa34088991db59598a55763ec2 436 Gene3D G3DSA:3.10.50.40 153 247 1.9E-67 T 13-10-2018 Theam_1369 399d01fa34088991db59598a55763ec2 436 PIRSF PIRSF003095 1 436 4.0E-90 T 13-10-2018 IPR005215 Trigger factor GO:0015031 Theam_1369 399d01fa34088991db59598a55763ec2 436 TIGRFAM TIGR00115 tig: trigger factor 14 415 5.3E-97 T 13-10-2018 IPR005215 Trigger factor GO:0015031 Theam_1510 fc17da33ecbc9f58d1f456b34e857600 533 SUPERFAMILY SSF51735 106 288 6.21E-60 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_1510 fc17da33ecbc9f58d1f456b34e857600 533 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 5 533 4.2E-209 T 13-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 Theam_1510 fc17da33ecbc9f58d1f456b34e857600 533 Gene3D G3DSA:3.30.1330.90 325 459 4.9E-39 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Theam_1510 fc17da33ecbc9f58d1f456b34e857600 533 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 227 243 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Theam_1510 fc17da33ecbc9f58d1f456b34e857600 533 Pfam PF01842 ACT domain 462 523 3.5E-10 T 13-10-2018 IPR002912 ACT domain Theam_1510 fc17da33ecbc9f58d1f456b34e857600 533 Gene3D G3DSA:3.30.70.260 460 533 9.2E-21 T 13-10-2018 Theam_1510 fc17da33ecbc9f58d1f456b34e857600 533 SUPERFAMILY SSF143548 328 455 1.12E-32 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Theam_1510 fc17da33ecbc9f58d1f456b34e857600 533 SUPERFAMILY SSF55021 449 530 1.53E-16 T 13-10-2018 Theam_1510 fc17da33ecbc9f58d1f456b34e857600 533 SUPERFAMILY SSF52283 14 124 5.67E-35 T 13-10-2018 Theam_1510 fc17da33ecbc9f58d1f456b34e857600 533 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 287 1.3E-64 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Theam_1510 fc17da33ecbc9f58d1f456b34e857600 533 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Theam_1510 fc17da33ecbc9f58d1f456b34e857600 533 SMART SM00997 137 291 0.0092 T 13-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Theam_1510 fc17da33ecbc9f58d1f456b34e857600 533 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 319 9.9E-36 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Theam_1510 fc17da33ecbc9f58d1f456b34e857600 533 Gene3D G3DSA:3.40.50.720 102 285 2.9E-118 T 13-10-2018 Theam_1510 fc17da33ecbc9f58d1f456b34e857600 533 Gene3D G3DSA:3.40.50.720 7 311 2.9E-118 T 13-10-2018 Theam_0431 886720368250f79fba470d1f464a9ce8 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Theam_0431 886720368250f79fba470d1f464a9ce8 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 302 1.0E-113 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Theam_0431 886720368250f79fba470d1f464a9ce8 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 290 3.5E-69 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Theam_0431 886720368250f79fba470d1f464a9ce8 303 Gene3D G3DSA:3.40.50.1100 42 144 2.2E-114 T 13-10-2018 Theam_0431 886720368250f79fba470d1f464a9ce8 303 SUPERFAMILY SSF53686 5 302 4.98E-95 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Theam_0431 886720368250f79fba470d1f464a9ce8 303 Gene3D G3DSA:3.40.50.1100 10 298 2.2E-114 T 13-10-2018 Theam_0431 886720368250f79fba470d1f464a9ce8 303 TIGRFAM TIGR01139 cysK: cysteine synthase A 10 302 1.9E-114 T 13-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Theam_1031 e668fcdd8371d810f556f624df527f42 476 SMART SM01340 197 291 3.9E-5 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Theam_1031 e668fcdd8371d810f556f624df527f42 476 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 90 96 - T 13-10-2018 IPR014762 DNA mismatch repair, conserved site Theam_1031 e668fcdd8371d810f556f624df527f42 476 SUPERFAMILY SSF54211 187 284 6.45E-10 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_1031 e668fcdd8371d810f556f624df527f42 476 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 218 284 1.6E-9 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Theam_1031 e668fcdd8371d810f556f624df527f42 476 SUPERFAMILY SSF118116 320 472 2.62E-12 T 13-10-2018 IPR037198 MutL, C-terminal domain superfamily Theam_1031 e668fcdd8371d810f556f624df527f42 476 Gene3D G3DSA:3.30.1370.100 357 425 1.0E-17 T 13-10-2018 Theam_1031 e668fcdd8371d810f556f624df527f42 476 Gene3D G3DSA:3.30.565.10 1 200 2.6E-56 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_1031 e668fcdd8371d810f556f624df527f42 476 Gene3D G3DSA:2.30.42.20 320 465 1.0E-17 T 13-10-2018 Theam_1031 e668fcdd8371d810f556f624df527f42 476 SUPERFAMILY SSF55874 2 183 1.22E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_1031 e668fcdd8371d810f556f624df527f42 476 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 23 122 1.4E-10 T 13-10-2018 Theam_1031 e668fcdd8371d810f556f624df527f42 476 Gene3D G3DSA:3.30.230.10 216 298 3.0E-9 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Theam_1031 e668fcdd8371d810f556f624df527f42 476 Pfam PF08676 MutL C terminal dimerisation domain 320 379 2.0E-5 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Theam_1030 1af58a61913f8f6a3fab4cdb7ba456ce 580 Gene3D G3DSA:1.10.3080.10 8 446 1.1E-81 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Theam_1030 1af58a61913f8f6a3fab4cdb7ba456ce 580 PRINTS PR00762 Chloride channel signature 119 138 2.4E-16 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_1030 1af58a61913f8f6a3fab4cdb7ba456ce 580 PRINTS PR00762 Chloride channel signature 373 389 2.4E-16 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_1030 1af58a61913f8f6a3fab4cdb7ba456ce 580 PRINTS PR00762 Chloride channel signature 170 189 2.4E-16 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_1030 1af58a61913f8f6a3fab4cdb7ba456ce 580 PRINTS PR00762 Chloride channel signature 338 358 2.4E-16 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_1030 1af58a61913f8f6a3fab4cdb7ba456ce 580 PRINTS PR00762 Chloride channel signature 391 410 2.4E-16 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_1030 1af58a61913f8f6a3fab4cdb7ba456ce 580 SMART SM00116 525 575 9.4E-8 T 13-10-2018 IPR000644 CBS domain Theam_1030 1af58a61913f8f6a3fab4cdb7ba456ce 580 SMART SM00116 463 510 6.4E-7 T 13-10-2018 IPR000644 CBS domain Theam_1030 1af58a61913f8f6a3fab4cdb7ba456ce 580 Pfam PF00654 Voltage gated chloride channel 77 422 2.0E-76 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_1030 1af58a61913f8f6a3fab4cdb7ba456ce 580 Gene3D G3DSA:3.10.580.10 447 578 3.6E-32 T 13-10-2018 Theam_1030 1af58a61913f8f6a3fab4cdb7ba456ce 580 SUPERFAMILY SSF54631 450 576 1.07E-30 T 13-10-2018 Theam_1030 1af58a61913f8f6a3fab4cdb7ba456ce 580 Pfam PF00571 CBS domain 456 508 1.3E-11 T 13-10-2018 IPR000644 CBS domain Theam_1030 1af58a61913f8f6a3fab4cdb7ba456ce 580 Pfam PF00571 CBS domain 518 575 1.8E-14 T 13-10-2018 IPR000644 CBS domain Theam_1030 1af58a61913f8f6a3fab4cdb7ba456ce 580 SUPERFAMILY SSF81340 7 423 3.92E-85 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 SUPERFAMILY SSF48452 639 740 2.07E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 SUPERFAMILY SSF48452 205 371 1.01E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 Gene3D G3DSA:1.25.40.10 200 275 6.8E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 SUPERFAMILY SSF48452 749 895 2.09E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 Gene3D G3DSA:1.25.40.10 790 909 4.4E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 Pfam PF13432 Tetratricopeptide repeat 340 381 6.2E-5 T 13-10-2018 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 Pfam PF13432 Tetratricopeptide repeat 791 851 2.1E-6 T 13-10-2018 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 SMART SM00028 473 506 300.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 SMART SM00028 638 671 390.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 SMART SM00028 335 368 140.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 SMART SM00028 860 893 0.026 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 SMART SM00028 785 818 320.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 SMART SM00028 748 781 170.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 Gene3D G3DSA:1.25.40.10 625 779 2.9E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 Gene3D G3DSA:1.25.40.10 334 510 7.5E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 Pfam PF13181 Tetratricopeptide repeat 861 891 0.0016 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0551 b7ea44863bdc3017a4f58e2fa7035106 914 SUPERFAMILY SSF48452 317 500 1.78E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0218 d6df50a269347983d4ce4914ad9fb366 155 PIRSF PIRSF001338 1 155 1.4E-65 T 13-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Theam_0218 d6df50a269347983d4ce4914ad9fb366 155 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 154 6.5E-60 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Theam_0218 d6df50a269347983d4ce4914ad9fb366 155 Pfam PF00731 AIR carboxylase 3 150 7.6E-62 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Theam_0218 d6df50a269347983d4ce4914ad9fb366 155 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 155 29.901 T 13-10-2018 IPR033747 Class I PurE Theam_0218 d6df50a269347983d4ce4914ad9fb366 155 SUPERFAMILY SSF52255 3 154 3.66E-60 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Theam_0218 d6df50a269347983d4ce4914ad9fb366 155 SMART SM01001 2 152 1.6E-89 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Theam_0218 d6df50a269347983d4ce4914ad9fb366 155 Gene3D G3DSA:3.40.50.7700 1 155 3.3E-68 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Theam_0221 c10a2bc9a68319ca22800898f15f7718 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 77 90 3.4E-19 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Theam_0221 c10a2bc9a68319ca22800898f15f7718 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 109 122 3.4E-19 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Theam_0221 c10a2bc9a68319ca22800898f15f7718 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 94 108 3.4E-19 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Theam_0221 c10a2bc9a68319ca22800898f15f7718 150 Pfam PF00364 Biotin-requiring enzyme 75 147 7.1E-25 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Theam_0221 c10a2bc9a68319ca22800898f15f7718 150 Gene3D G3DSA:2.40.50.100 70 148 2.5E-33 T 13-10-2018 Theam_0221 c10a2bc9a68319ca22800898f15f7718 150 SUPERFAMILY SSF51230 72 148 3.01E-26 T 13-10-2018 IPR011053 Single hybrid motif Theam_0221 c10a2bc9a68319ca22800898f15f7718 150 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 2 148 2.2E-47 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Theam_1269 dde174e996098533bda13a52dfccf8c0 425 TIGRFAM TIGR04013 B12_SAM_MJ_1487: B12-binding domain/radical SAM domain protein, MJ_1487 family 5 409 6.6E-139 T 13-10-2018 IPR023980 Conserved hypothetical protein CHP04013, B12-binding/radical SAM-type Theam_1269 dde174e996098533bda13a52dfccf8c0 425 Gene3D G3DSA:3.40.50.280 3 141 3.6E-27 T 13-10-2018 Theam_1269 dde174e996098533bda13a52dfccf8c0 425 Pfam PF04055 Radical SAM superfamily 179 355 4.1E-25 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_1269 dde174e996098533bda13a52dfccf8c0 425 SUPERFAMILY SSF102114 166 402 1.83E-44 T 13-10-2018 Theam_1269 dde174e996098533bda13a52dfccf8c0 425 Gene3D G3DSA:3.80.30.20 173 401 7.0E-45 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Theam_1269 dde174e996098533bda13a52dfccf8c0 425 SMART SM00729 175 399 6.2E-48 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_1269 dde174e996098533bda13a52dfccf8c0 425 Pfam PF02310 B12 binding domain 54 128 3.9E-11 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Theam_1688 993d54bde678df3ba655697e4848a17b 380 Gene3D G3DSA:3.30.300.20 291 380 1.6E-21 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Theam_1688 993d54bde678df3ba655697e4848a17b 380 Gene3D G3DSA:3.30.1480.10 2 123 1.2E-32 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Theam_1688 993d54bde678df3ba655697e4848a17b 380 Gene3D G3DSA:3.30.300.20 212 290 4.1E-32 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Theam_1688 993d54bde678df3ba655697e4848a17b 380 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 349 7.4E-108 T 13-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Theam_1688 993d54bde678df3ba655697e4848a17b 380 SUPERFAMILY SSF54814 213 291 4.05E-28 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Theam_1688 993d54bde678df3ba655697e4848a17b 380 Pfam PF00575 S1 RNA binding domain 131 185 9.7E-7 T 13-10-2018 IPR003029 S1 domain GO:0003676 Theam_1688 993d54bde678df3ba655697e4848a17b 380 SMART SM00316 132 213 6.8E-8 T 13-10-2018 IPR022967 RNA-binding domain, S1 Theam_1688 993d54bde678df3ba655697e4848a17b 380 Pfam PF08529 NusA N-terminal domain 6 122 1.1E-29 T 13-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Theam_1688 993d54bde678df3ba655697e4848a17b 380 SUPERFAMILY SSF50249 131 190 6.63E-13 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_1688 993d54bde678df3ba655697e4848a17b 380 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 378 27.065 T 13-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Theam_1688 993d54bde678df3ba655697e4848a17b 380 Pfam PF13184 NusA-like KH domain 243 308 1.5E-25 T 13-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Theam_1688 993d54bde678df3ba655697e4848a17b 380 SUPERFAMILY SSF54814 292 353 1.11E-9 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Theam_1688 993d54bde678df3ba655697e4848a17b 380 Gene3D G3DSA:2.40.50.140 128 192 1.5E-17 T 13-10-2018 Theam_1688 993d54bde678df3ba655697e4848a17b 380 SUPERFAMILY SSF69705 4 123 4.58E-29 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Theam_0911 4ead4436b734fe2f54c1dd93682de2fc 321 SUPERFAMILY SSF51412 2 306 1.5E-76 T 13-10-2018 Theam_0911 4ead4436b734fe2f54c1dd93682de2fc 321 Pfam PF03060 Nitronate monooxygenase 82 300 7.8E-52 T 13-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Theam_0911 4ead4436b734fe2f54c1dd93682de2fc 321 Pfam PF03060 Nitronate monooxygenase 4 81 4.7E-26 T 13-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Theam_0911 4ead4436b734fe2f54c1dd93682de2fc 321 TIGRFAM TIGR03151 enACPred_II: putative enoyl-[acyl-carrier-protein] reductase II 3 307 1.2E-145 T 13-10-2018 IPR017569 Enoyl-(acyl-carrier-protein) reductase II, putative Theam_0911 4ead4436b734fe2f54c1dd93682de2fc 321 Gene3D G3DSA:3.20.20.70 2 314 7.1E-115 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0952 d9ac0d1b1ef4b04046172e7e78faf132 242 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 158 205 2.1E-6 T 13-10-2018 IPR002831 Transcription regulator TrmB, N-terminal Theam_0952 d9ac0d1b1ef4b04046172e7e78faf132 242 SUPERFAMILY SSF46785 156 221 1.47E-7 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0952 d9ac0d1b1ef4b04046172e7e78faf132 242 Gene3D G3DSA:1.10.10.10 152 227 3.7E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 SUPERFAMILY SSF48695 765 870 5.86E-8 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 SUPERFAMILY SSF48695 27 224 1.91E-18 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 Gene3D G3DSA:3.90.10.10 366 490 8.7E-6 T 13-10-2018 Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 Gene3D G3DSA:3.90.10.10 491 622 4.0E-6 T 13-10-2018 Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 Gene3D G3DSA:1.10.1130.10 748 888 7.4E-7 T 13-10-2018 Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 SUPERFAMILY SSF48695 472 832 2.28E-24 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 378 422 3.8E-6 T 13-10-2018 IPR010177 Doubled CXXCH motif Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 729 771 2.0E-5 T 13-10-2018 IPR010177 Doubled CXXCH motif Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 299 349 6.6E-5 T 13-10-2018 IPR010177 Doubled CXXCH motif Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 102 148 2.5E-5 T 13-10-2018 IPR010177 Doubled CXXCH motif Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 663 703 6.3E-7 T 13-10-2018 IPR010177 Doubled CXXCH motif Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 513 548 3.4E-6 T 13-10-2018 IPR010177 Doubled CXXCH motif Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 187 219 1.7E-5 T 13-10-2018 IPR010177 Doubled CXXCH motif Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 258 290 1.6E-7 T 13-10-2018 IPR010177 Doubled CXXCH motif Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 574 615 1.9E-6 T 13-10-2018 IPR010177 Doubled CXXCH motif Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 SUPERFAMILY SSF48695 137 456 5.33E-27 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_0777 f44ac0316a0f47c2c368fb04958d75ce 890 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 378 422 2.4E-7 T 13-10-2018 IPR010177 Doubled CXXCH motif Theam_0615 29353a61bfbd9a5c06026300243b6f3d 238 Pfam PF00072 Response regulator receiver domain 7 110 1.3E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_0615 29353a61bfbd9a5c06026300243b6f3d 238 SUPERFAMILY SSF52172 2 128 5.12E-21 T 13-10-2018 IPR011006 CheY-like superfamily Theam_0615 29353a61bfbd9a5c06026300243b6f3d 238 SMART SM00448 1 110 2.3E-16 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_0615 29353a61bfbd9a5c06026300243b6f3d 238 Gene3D G3DSA:3.40.50.2300 1 127 1.9E-20 T 13-10-2018 Theam_0602 bea447218558d2227db393c89ce8cbb2 313 Hamap MF_00487 Malate dehydrogenase [mdh]. 4 312 44.933 T 13-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 Theam_0602 bea447218558d2227db393c89ce8cbb2 313 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 309 3.4E-127 T 13-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 Theam_0602 bea447218558d2227db393c89ce8cbb2 313 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 4.4E-34 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Theam_0602 bea447218558d2227db393c89ce8cbb2 313 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 4.4E-34 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Theam_0602 bea447218558d2227db393c89ce8cbb2 313 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 4.4E-34 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Theam_0602 bea447218558d2227db393c89ce8cbb2 313 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 4.4E-34 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Theam_0602 bea447218558d2227db393c89ce8cbb2 313 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 4.4E-34 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Theam_0602 bea447218558d2227db393c89ce8cbb2 313 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 2.8E-27 T 13-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 Theam_0602 bea447218558d2227db393c89ce8cbb2 313 SUPERFAMILY SSF51735 5 144 6.09E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0602 bea447218558d2227db393c89ce8cbb2 313 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 143 1.6E-43 T 13-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 Theam_0602 bea447218558d2227db393c89ce8cbb2 313 Gene3D G3DSA:3.90.110.10 146 311 1.4E-56 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Theam_0602 bea447218558d2227db393c89ce8cbb2 313 PIRSF PIRSF000102 1 312 2.3E-107 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Theam_0602 bea447218558d2227db393c89ce8cbb2 313 SUPERFAMILY SSF56327 144 311 9.66E-50 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Theam_0602 bea447218558d2227db393c89ce8cbb2 313 Gene3D G3DSA:3.40.50.720 1 145 6.2E-58 T 13-10-2018 Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 Gene3D G3DSA:3.30.930.10 11 462 1.9E-255 T 13-10-2018 Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 SUPERFAMILY SSF55681 10 475 4.8E-106 T 13-10-2018 Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 Pfam PF04073 Aminoacyl-tRNA editing domain 259 376 2.7E-29 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 558 3.5E-222 T 13-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 SUPERFAMILY SSF55826 221 385 1.31E-33 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 566 41.427 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 Gene3D G3DSA:3.90.960.10 240 386 1.9E-255 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 Gene3D G3DSA:3.40.50.800 4 550 1.9E-255 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.7E-18 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.7E-18 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.7E-18 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.7E-18 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 SUPERFAMILY SSF52954 460 565 1.51E-33 T 13-10-2018 Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 1.8E-53 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 Pfam PF03129 Anticodon binding domain 473 563 1.2E-23 T 13-10-2018 IPR004154 Anticodon-binding Theam_0004 6db84e52c3b21e915d91317ba5364e11 568 PIRSF PIRSF001535 1 567 1.3E-258 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Theam_0064 7cd736549efb138fcef1c56255ea783a 175 Gene3D G3DSA:3.90.1720.10 6 157 1.4E-11 T 13-10-2018 Theam_0064 7cd736549efb138fcef1c56255ea783a 175 SUPERFAMILY SSF54001 7 158 2.68E-19 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Theam_0064 7cd736549efb138fcef1c56255ea783a 175 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 27 135 7.8E-8 T 13-10-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family Theam_1450 4f659782a0f0be8bdfe5ce47773dc8d1 532 PIRSF PIRSF004862 2 530 2.2E-142 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Theam_1450 4f659782a0f0be8bdfe5ce47773dc8d1 532 PRINTS PR01009 Flagellar M-ring protein signature 195 213 7.4E-33 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Theam_1450 4f659782a0f0be8bdfe5ce47773dc8d1 532 PRINTS PR01009 Flagellar M-ring protein signature 120 138 7.4E-33 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Theam_1450 4f659782a0f0be8bdfe5ce47773dc8d1 532 PRINTS PR01009 Flagellar M-ring protein signature 340 364 7.4E-33 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Theam_1450 4f659782a0f0be8bdfe5ce47773dc8d1 532 PRINTS PR01009 Flagellar M-ring protein signature 152 166 7.4E-33 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Theam_1450 4f659782a0f0be8bdfe5ce47773dc8d1 532 PRINTS PR01009 Flagellar M-ring protein signature 267 285 7.4E-33 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Theam_1450 4f659782a0f0be8bdfe5ce47773dc8d1 532 Pfam PF01514 Secretory protein of YscJ/FliF family 31 219 2.0E-73 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF Theam_1450 4f659782a0f0be8bdfe5ce47773dc8d1 532 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 12 426 4.4E-107 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Theam_1450 4f659782a0f0be8bdfe5ce47773dc8d1 532 Pfam PF08345 Flagellar M-ring protein C-terminal 254 420 7.0E-36 T 13-10-2018 IPR013556 Flagellar M-ring C-terminal Theam_1450 4f659782a0f0be8bdfe5ce47773dc8d1 532 Gene3D G3DSA:3.30.300.30 122 220 5.8E-12 T 13-10-2018 Theam_0846 588813fd9db6efdb4740d839be9ea9be 167 Gene3D G3DSA:2.30.30.40 30 157 7.7E-32 T 13-10-2018 Theam_0846 588813fd9db6efdb4740d839be9ea9be 167 SUPERFAMILY SSF50341 20 166 1.7E-31 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Theam_0846 588813fd9db6efdb4740d839be9ea9be 167 SMART SM00260 23 163 6.9E-27 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Theam_0846 588813fd9db6efdb4740d839be9ea9be 167 Pfam PF01584 CheW-like domain 27 166 6.4E-30 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Theam_0846 588813fd9db6efdb4740d839be9ea9be 167 Gene3D G3DSA:2.40.50.180 46 158 7.7E-32 T 13-10-2018 Theam_0484 8b81d9cb3160d299ed0b1a8783a54bb4 413 Gene3D G3DSA:1.10.645.10 1 413 2.6E-95 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0484 8b81d9cb3160d299ed0b1a8783a54bb4 413 SUPERFAMILY SSF56762 1 413 1.24E-82 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0484 8b81d9cb3160d299ed0b1a8783a54bb4 413 Pfam PF00374 Nickel-dependent hydrogenase 40 125 4.9E-17 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Theam_1364 4d4371214cb741f5303e5077642b5a2f 186 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 112 122 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Theam_1364 4d4371214cb741f5303e5077642b5a2f 186 Gene3D G3DSA:3.30.1130.10 54 185 3.6E-60 T 13-10-2018 Theam_1364 4d4371214cb741f5303e5077642b5a2f 186 SUPERFAMILY SSF55620 3 183 3.26E-77 T 13-10-2018 Theam_1364 4d4371214cb741f5303e5077642b5a2f 186 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 4 184 41.32 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Theam_1364 4d4371214cb741f5303e5077642b5a2f 186 Pfam PF01227 GTP cyclohydrolase I 8 178 1.7E-77 T 13-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Theam_1364 4d4371214cb741f5303e5077642b5a2f 186 Gene3D G3DSA:1.10.286.10 2 53 6.5E-23 T 13-10-2018 Theam_1364 4d4371214cb741f5303e5077642b5a2f 186 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 8 184 7.6E-74 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Theam_1364 4d4371214cb741f5303e5077642b5a2f 186 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 63 79 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Theam_0824 d57bfb7549fb11beeca158c76e3ad4da 434 Gene3D G3DSA:3.65.10.10 9 417 5.8E-157 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Theam_0824 d57bfb7549fb11beeca158c76e3ad4da 434 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 408 1.4E-93 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Theam_0824 d57bfb7549fb11beeca158c76e3ad4da 434 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 4 419 42.244 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0824 d57bfb7549fb11beeca158c76e3ad4da 434 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 5 418 1.1E-161 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0824 d57bfb7549fb11beeca158c76e3ad4da 434 Gene3D G3DSA:3.65.10.10 23 232 5.8E-157 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Theam_0824 d57bfb7549fb11beeca158c76e3ad4da 434 SUPERFAMILY SSF55205 6 420 7.38E-131 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Theam_1655 0d2bea30aa74b9bdfd144cf552a2d4aa 357 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 15 352 33.62 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Theam_1655 0d2bea30aa74b9bdfd144cf552a2d4aa 357 Gene3D G3DSA:3.40.50.620 2 210 2.8E-60 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1655 0d2bea30aa74b9bdfd144cf552a2d4aa 357 Pfam PF03054 tRNA methyl transferase 15 351 2.4E-92 T 13-10-2018 Theam_1655 0d2bea30aa74b9bdfd144cf552a2d4aa 357 Gene3D G3DSA:2.30.30.280 211 273 1.3E-17 T 13-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Theam_1655 0d2bea30aa74b9bdfd144cf552a2d4aa 357 SUPERFAMILY SSF52402 14 242 7.06E-45 T 13-10-2018 Theam_1655 0d2bea30aa74b9bdfd144cf552a2d4aa 357 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 15 351 3.8E-85 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Theam_1655 0d2bea30aa74b9bdfd144cf552a2d4aa 357 Gene3D G3DSA:2.40.30.10 274 356 1.7E-13 T 13-10-2018 Theam_0627 48a75298960b237f03fc790b0ed6956c 136 Gene3D G3DSA:1.10.10.10 1 76 2.5E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0627 48a75298960b237f03fc790b0ed6956c 136 SUPERFAMILY SSF46785 4 126 9.53E-28 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0627 48a75298960b237f03fc790b0ed6956c 136 Pfam PF01475 Ferric uptake regulator family 9 121 3.0E-24 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Theam_0627 48a75298960b237f03fc790b0ed6956c 136 Gene3D G3DSA:3.30.1490.190 79 133 3.3E-13 T 13-10-2018 Theam_0877 696682545bd17ba124969e3360512c07 185 Gene3D G3DSA:3.90.550.10 1 185 1.0E-33 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0877 696682545bd17ba124969e3360512c07 185 SUPERFAMILY SSF53448 1 158 8.81E-19 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0877 696682545bd17ba124969e3360512c07 185 Pfam PF12804 MobA-like NTP transferase domain 1 147 5.5E-22 T 13-10-2018 IPR025877 MobA-like NTP transferase Theam_0210 beb8894aca6b63cc435a082eaca5afa3 400 SMART SM00257 41 88 8.2E-13 T 13-10-2018 IPR018392 LysM domain Theam_0210 beb8894aca6b63cc435a082eaca5afa3 400 Pfam PF01476 LysM domain 42 88 1.1E-11 T 13-10-2018 IPR018392 LysM domain Theam_0210 beb8894aca6b63cc435a082eaca5afa3 400 SUPERFAMILY SSF54106 40 88 6.8E-8 T 13-10-2018 Theam_0210 beb8894aca6b63cc435a082eaca5afa3 400 Gene3D G3DSA:3.10.350.10 36 101 4.3E-15 T 13-10-2018 IPR036779 LysM domain superfamily Theam_1696 745c6965d2cc8b3f57a6d0ecae852d88 295 Pfam PF01795 MraW methylase family 4 292 4.1E-109 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Theam_1696 745c6965d2cc8b3f57a6d0ecae852d88 295 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 6 293 37.566 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Theam_1696 745c6965d2cc8b3f57a6d0ecae852d88 295 SUPERFAMILY SSF81799 113 215 3.27E-34 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Theam_1696 745c6965d2cc8b3f57a6d0ecae852d88 295 Gene3D G3DSA:3.40.50.150 6 289 9.8E-107 T 13-10-2018 Theam_1696 745c6965d2cc8b3f57a6d0ecae852d88 295 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 292 6.7E-97 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Theam_1696 745c6965d2cc8b3f57a6d0ecae852d88 295 PIRSF PIRSF004486 1 294 1.7E-106 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Theam_1696 745c6965d2cc8b3f57a6d0ecae852d88 295 Gene3D G3DSA:1.10.150.170 112 217 9.8E-107 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Theam_1696 745c6965d2cc8b3f57a6d0ecae852d88 295 SUPERFAMILY SSF53335 5 293 7.92E-46 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_1163 2a0fd93c4c9ae045cefd7d51662b66c1 424 SUPERFAMILY SSF53448 5 124 9.85E-25 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_1163 2a0fd93c4c9ae045cefd7d51662b66c1 424 Pfam PF00535 Glycosyl transferase family 2 8 142 1.3E-20 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Theam_1163 2a0fd93c4c9ae045cefd7d51662b66c1 424 Gene3D G3DSA:3.90.550.10 2 146 1.3E-25 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0424 8d9d6c0bf36c0aa6e15f1d369760a7f4 121 Pfam PF03927 NapD protein 2 79 7.2E-12 T 13-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly Theam_0424 8d9d6c0bf36c0aa6e15f1d369760a7f4 121 Gene3D G3DSA:3.30.70.920 2 75 4.5E-9 T 13-10-2018 Theam_1054 2a4e6ed73073c34464e127f8e14f6c24 374 SUPERFAMILY SSF110997 289 351 3.01E-6 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Theam_1054 2a4e6ed73073c34464e127f8e14f6c24 374 Pfam PF05036 Sporulation related domain 289 349 3.3E-8 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Theam_1424 948970aa60ff337a067099f06d7d6486 598 Pfam PF00679 Elongation factor G C-terminus 401 488 5.1E-24 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Theam_1424 948970aa60ff337a067099f06d7d6486 598 SUPERFAMILY SSF52540 1 207 5.52E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1424 948970aa60ff337a067099f06d7d6486 598 Gene3D G3DSA:3.40.50.300 1 187 5.6E-77 T 13-10-2018 Theam_1424 948970aa60ff337a067099f06d7d6486 598 SMART SM00838 400 488 0.0016 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Theam_1424 948970aa60ff337a067099f06d7d6486 598 Gene3D G3DSA:2.40.30.10 188 287 4.9E-38 T 13-10-2018 Theam_1424 948970aa60ff337a067099f06d7d6486 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Theam_1424 948970aa60ff337a067099f06d7d6486 598 TIGRFAM TIGR01393 lepA: elongation factor 4 5 598 0.0 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 Theam_1424 948970aa60ff337a067099f06d7d6486 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 598 310.254 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 Theam_1424 948970aa60ff337a067099f06d7d6486 598 SUPERFAMILY SSF50447 167 290 1.77E-34 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Theam_1424 948970aa60ff337a067099f06d7d6486 598 Gene3D G3DSA:3.30.70.3380 370 481 2.1E-45 T 13-10-2018 Theam_1424 948970aa60ff337a067099f06d7d6486 598 Gene3D G3DSA:3.30.70.870 288 369 1.0E-37 T 13-10-2018 Theam_1424 948970aa60ff337a067099f06d7d6486 598 Pfam PF00009 Elongation factor Tu GTP binding domain 6 183 1.5E-55 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1424 948970aa60ff337a067099f06d7d6486 598 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 4.3E-53 T 13-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Theam_1424 948970aa60ff337a067099f06d7d6486 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 178 5.1E-20 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Theam_1424 948970aa60ff337a067099f06d7d6486 598 Pfam PF03144 Elongation factor Tu domain 2 207 277 2.6E-13 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Theam_1424 948970aa60ff337a067099f06d7d6486 598 SUPERFAMILY SSF54980 293 372 2.95E-19 T 13-10-2018 IPR035647 EF-G domain III/V-like Theam_1424 948970aa60ff337a067099f06d7d6486 598 SUPERFAMILY SSF54980 401 496 1.1E-26 T 13-10-2018 IPR035647 EF-G domain III/V-like Theam_1424 948970aa60ff337a067099f06d7d6486 598 Gene3D G3DSA:3.30.70.2570 482 556 2.7E-37 T 13-10-2018 IPR038363 LepA, C-terminal domain superfamily Theam_1424 948970aa60ff337a067099f06d7d6486 598 PRINTS PR00315 GTP-binding elongation factor signature 8 21 6.6E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1424 948970aa60ff337a067099f06d7d6486 598 PRINTS PR00315 GTP-binding elongation factor signature 92 103 6.6E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1424 948970aa60ff337a067099f06d7d6486 598 PRINTS PR00315 GTP-binding elongation factor signature 128 137 6.6E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1424 948970aa60ff337a067099f06d7d6486 598 PRINTS PR00315 GTP-binding elongation factor signature 51 59 6.6E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_1424 948970aa60ff337a067099f06d7d6486 598 PRINTS PR00315 GTP-binding elongation factor signature 76 86 6.6E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_0967 648fa105292ba1e62f123823a5489237 482 SUPERFAMILY SSF46548 98 198 3.92E-10 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Theam_0967 648fa105292ba1e62f123823a5489237 482 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 191 401 7.8E-18 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Theam_0967 648fa105292ba1e62f123823a5489237 482 Gene3D G3DSA:1.10.1060.10 82 185 1.4E-14 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Theam_0967 648fa105292ba1e62f123823a5489237 482 Gene3D G3DSA:3.50.50.60 291 378 9.7E-18 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0967 648fa105292ba1e62f123823a5489237 482 PRINTS PR00419 Adrenodoxin reductase family signature 214 227 2.7E-7 T 13-10-2018 Theam_0967 648fa105292ba1e62f123823a5489237 482 PRINTS PR00419 Adrenodoxin reductase family signature 191 213 2.7E-7 T 13-10-2018 Theam_0967 648fa105292ba1e62f123823a5489237 482 Gene3D G3DSA:3.40.50.720 187 290 1.8E-19 T 13-10-2018 Theam_0967 648fa105292ba1e62f123823a5489237 482 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 88 171 1.1E-12 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Theam_0967 648fa105292ba1e62f123823a5489237 482 SUPERFAMILY SSF51971 189 394 3.06E-36 T 13-10-2018 Theam_0271 fd73a0336554270e8b0aeaa53eabf051 140 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 140 30.886 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0271 fd73a0336554270e8b0aeaa53eabf051 140 Pfam PF00410 Ribosomal protein S8 4 140 1.7E-48 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0271 fd73a0336554270e8b0aeaa53eabf051 140 Gene3D G3DSA:3.30.1490.10 83 140 2.7E-25 T 13-10-2018 Theam_0271 fd73a0336554270e8b0aeaa53eabf051 140 ProSitePatterns PS00053 Ribosomal protein S8 signature. 110 127 - T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0271 fd73a0336554270e8b0aeaa53eabf051 140 SUPERFAMILY SSF56047 1 140 1.01E-44 T 13-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0271 fd73a0336554270e8b0aeaa53eabf051 140 Gene3D G3DSA:3.30.1370.30 1 82 1.3E-26 T 13-10-2018 Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 Pfam PF00140 Sigma-70 factor, region 1.2 47 80 1.6E-14 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 Pfam PF04542 Sigma-70 region 2 85 152 1.3E-19 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 PRINTS PR00046 Major sigma-70 factor signature 293 304 3.3E-22 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 PRINTS PR00046 Major sigma-70 factor signature 133 141 3.3E-22 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 PRINTS PR00046 Major sigma-70 factor signature 109 122 3.3E-22 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 PRINTS PR00046 Major sigma-70 factor signature 257 269 3.3E-22 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 PRINTS PR00046 Major sigma-70 factor signature 278 293 3.3E-22 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 SUPERFAMILY SSF88659 158 230 9.16E-17 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 Gene3D G3DSA:1.10.601.10 45 78 6.4E-6 T 13-10-2018 Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 Gene3D G3DSA:1.10.601.10 79 157 1.8E-33 T 13-10-2018 Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 SUPERFAMILY SSF88946 44 153 1.96E-42 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 278 304 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 80 307 1.0E-40 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 Gene3D G3DSA:1.10.10.10 236 318 2.9E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 Pfam PF04545 Sigma-70, region 4 254 306 7.7E-19 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 SUPERFAMILY SSF88659 215 316 1.42E-27 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 Gene3D G3DSA:1.10.10.10 158 232 9.4E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_1084 6e3fb99e23a3858f3cfe4f279bdb1136 318 Pfam PF04539 Sigma-70 region 3 166 234 2.7E-20 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Theam_0316 dc19d4c8f1e591de61092b0e63f29a31 118 Gene3D G3DSA:3.40.1260.10 2 118 2.5E-30 T 13-10-2018 IPR027396 DsrEFH-like Theam_0316 dc19d4c8f1e591de61092b0e63f29a31 118 SUPERFAMILY SSF75169 1 118 1.11E-25 T 13-10-2018 IPR027396 DsrEFH-like Theam_0316 dc19d4c8f1e591de61092b0e63f29a31 118 Pfam PF02635 DsrE/DsrF-like family 2 118 3.3E-20 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Theam_1297 423607cb689950ea44665284b6e1f0ee 448 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.4E-21 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Theam_1297 423607cb689950ea44665284b6e1f0ee 448 Pfam PF00448 SRP54-type protein, GTPase domain 99 294 2.8E-79 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Theam_1297 423607cb689950ea44665284b6e1f0ee 448 Gene3D G3DSA:1.20.120.140 5 304 1.6E-128 T 13-10-2018 Theam_1297 423607cb689950ea44665284b6e1f0ee 448 Pfam PF02978 Signal peptide binding domain 325 426 1.8E-33 T 13-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Theam_1297 423607cb689950ea44665284b6e1f0ee 448 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 436 35.892 T 13-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Theam_1297 423607cb689950ea44665284b6e1f0ee 448 SMART SM00962 99 294 3.2E-116 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Theam_1297 423607cb689950ea44665284b6e1f0ee 448 SUPERFAMILY SSF47446 325 429 3.92E-35 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Theam_1297 423607cb689950ea44665284b6e1f0ee 448 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 267 280 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Theam_1297 423607cb689950ea44665284b6e1f0ee 448 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 428 1.2E-183 T 13-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Theam_1297 423607cb689950ea44665284b6e1f0ee 448 SMART SM00963 1 86 5.8E-29 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Theam_1297 423607cb689950ea44665284b6e1f0ee 448 Gene3D G3DSA:1.10.260.30 307 441 1.8E-43 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Theam_1297 423607cb689950ea44665284b6e1f0ee 448 SUPERFAMILY SSF52540 42 351 2.46E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1297 423607cb689950ea44665284b6e1f0ee 448 SMART SM00382 98 249 1.2E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1297 423607cb689950ea44665284b6e1f0ee 448 Gene3D G3DSA:3.40.50.300 90 283 1.6E-128 T 13-10-2018 Theam_0479 794404f2501e3269481b52d73f48cb59 114 SUPERFAMILY SSF143243 5 113 1.96E-13 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0479 794404f2501e3269481b52d73f48cb59 114 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 10 113 2.7E-7 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 403 998 1.7E-258 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 Pfam PF00271 Helicase conserved C-terminal domain 737 839 2.8E-17 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 SMART SM00982 928 1026 4.6E-20 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 SUPERFAMILY SSF143517 917 1041 7.85E-22 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 SUPERFAMILY SSF52540 471 713 7.39E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 Gene3D G3DSA:2.30.30.840 413 471 6.3E-222 T 13-10-2018 Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 SUPERFAMILY SSF141259 405 478 8.63E-20 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 SMART SM01058 409 506 8.2E-30 T 13-10-2018 IPR003711 CarD-like/TRCF domain Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 Gene3D G3DSA:3.40.50.11180 25 302 2.4E-23 T 13-10-2018 Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 Gene3D G3DSA:3.40.50.300 472 711 6.3E-222 T 13-10-2018 Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 SUPERFAMILY SSF52540 23 298 4.07E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 Gene3D G3DSA:3.40.50.300 409 917 6.3E-222 T 13-10-2018 Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 Gene3D G3DSA:3.90.1150.50 924 1058 6.5E-22 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 Gene3D G3DSA:3.30.2060.10 127 204 2.4E-23 T 13-10-2018 Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 Pfam PF00270 DEAD/DEAH box helicase 535 694 2.3E-22 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 Pfam PF02559 CarD-like/TRCF domain 410 505 1.0E-21 T 13-10-2018 IPR003711 CarD-like/TRCF domain Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 SUPERFAMILY SSF52540 712 918 2.4E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 SMART SM00487 530 723 6.2E-41 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 20 1020 24.909 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 Pfam PF03461 TRCF domain 929 1018 4.4E-14 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Theam_0310 e72531e785e1cfbf05a493376e4915dc 1058 SMART SM00490 756 840 2.4E-20 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_1504 004bcbde825947c7343b73a7fc23c1f3 439 TIGRFAM TIGR00277 HDIG: HDIG domain 245 335 1.3E-7 T 13-10-2018 IPR006675 HDIG domain Theam_1504 004bcbde825947c7343b73a7fc23c1f3 439 Gene3D G3DSA:1.10.3210.10 224 420 2.7E-53 T 13-10-2018 Theam_1504 004bcbde825947c7343b73a7fc23c1f3 439 SMART SM00471 241 376 2.3E-12 T 13-10-2018 IPR003607 HD/PDEase domain Theam_1504 004bcbde825947c7343b73a7fc23c1f3 439 SMART SM00471 22 155 8.2E-4 T 13-10-2018 IPR003607 HD/PDEase domain Theam_1504 004bcbde825947c7343b73a7fc23c1f3 439 SUPERFAMILY SSF109604 234 402 5.84E-33 T 13-10-2018 Theam_1504 004bcbde825947c7343b73a7fc23c1f3 439 SUPERFAMILY SSF109604 28 188 4.04E-17 T 13-10-2018 Theam_1504 004bcbde825947c7343b73a7fc23c1f3 439 Gene3D G3DSA:1.10.3210.10 10 196 2.2E-23 T 13-10-2018 Theam_1504 004bcbde825947c7343b73a7fc23c1f3 439 Pfam PF01966 HD domain 28 144 1.7E-10 T 13-10-2018 IPR006674 HD domain Theam_1504 004bcbde825947c7343b73a7fc23c1f3 439 Pfam PF01966 HD domain 246 366 5.4E-20 T 13-10-2018 IPR006674 HD domain Theam_1484 5fbb7e9f71ec3e6b1bb53a631cd01532 399 Gene3D G3DSA:3.30.830.10 219 398 5.5E-35 T 13-10-2018 Theam_1484 5fbb7e9f71ec3e6b1bb53a631cd01532 399 SUPERFAMILY SSF63411 9 200 1.69E-27 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Theam_1484 5fbb7e9f71ec3e6b1bb53a631cd01532 399 Pfam PF00675 Insulinase (Peptidase family M16) 14 154 3.0E-5 T 13-10-2018 IPR011765 Peptidase M16, N-terminal Theam_1484 5fbb7e9f71ec3e6b1bb53a631cd01532 399 Gene3D G3DSA:3.30.830.10 7 205 2.4E-23 T 13-10-2018 Theam_1484 5fbb7e9f71ec3e6b1bb53a631cd01532 399 SUPERFAMILY SSF63411 209 389 1.17E-31 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Theam_1484 5fbb7e9f71ec3e6b1bb53a631cd01532 399 Pfam PF05193 Peptidase M16 inactive domain 161 331 2.9E-17 T 13-10-2018 IPR007863 Peptidase M16, C-terminal Theam_0003 fb2ee4db695833e4e5cf05b0d2412f01 270 SUPERFAMILY SSF52980 16 187 1.02E-6 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Theam_0003 fb2ee4db695833e4e5cf05b0d2412f01 270 Pfam PF12705 PD-(D/E)XK nuclease superfamily 18 266 1.4E-22 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Theam_1354 1ba860b7cda562d5056d402a53509a37 457 Pfam PF00753 Metallo-beta-lactamase superfamily 11 193 5.3E-14 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_1354 1ba860b7cda562d5056d402a53509a37 457 SUPERFAMILY SSF56281 1 456 2.96E-137 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_1354 1ba860b7cda562d5056d402a53509a37 457 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 386 449 2.9E-13 T 13-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Theam_1354 1ba860b7cda562d5056d402a53509a37 457 SMART SM00849 13 231 2.5E-15 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_1354 1ba860b7cda562d5056d402a53509a37 457 SMART SM01027 247 372 4.0E-62 T 13-10-2018 IPR022712 Beta-Casp domain Theam_1354 1ba860b7cda562d5056d402a53509a37 457 Pfam PF10996 Beta-Casp domain 247 372 2.4E-28 T 13-10-2018 IPR022712 Beta-Casp domain Theam_1354 1ba860b7cda562d5056d402a53509a37 457 Gene3D G3DSA:3.60.15.10 7 430 9.1E-147 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_1354 1ba860b7cda562d5056d402a53509a37 457 Gene3D G3DSA:3.40.50.10890 215 398 9.1E-147 T 13-10-2018 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.8E-51 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 205 229 1.8E-51 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 128 151 1.8E-51 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 79 95 1.8E-51 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 174 195 1.8E-51 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.8E-51 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 PRINTS PR01959 SuhB family inositol monophosphatase signature 102 121 6.0E-21 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 PRINTS PR01959 SuhB family inositol monophosphatase signature 195 207 6.0E-21 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 PRINTS PR01959 SuhB family inositol monophosphatase signature 153 179 6.0E-21 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 6.0E-21 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 Gene3D G3DSA:3.40.190.80 141 258 4.7E-37 T 13-10-2018 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 Pfam PF00459 Inositol monophosphatase family 2 257 1.8E-72 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 208 222 - T 13-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 Gene3D G3DSA:3.30.540.10 1 137 8.9E-49 T 13-10-2018 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 SUPERFAMILY SSF56655 1 257 1.57E-83 T 13-10-2018 Theam_1235 e7ac53b8ce72e1bc0dcf637f3541f517 259 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 79 92 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Theam_1267 a825fb99ecf9532f683a40d4f01a8509 235 Gene3D G3DSA:3.40.470.10 46 230 5.2E-69 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Theam_1267 a825fb99ecf9532f683a40d4f01a8509 235 SUPERFAMILY SSF52141 47 227 6.54E-59 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Theam_1267 a825fb99ecf9532f683a40d4f01a8509 235 SMART SM00986 73 225 4.5E-43 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Theam_1267 a825fb99ecf9532f683a40d4f01a8509 235 SMART SM00987 73 225 4.5E-43 T 13-10-2018 Theam_1267 a825fb99ecf9532f683a40d4f01a8509 235 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 59 225 3.6E-66 T 13-10-2018 IPR005273 Uracil-DNA glycosylase family 4 Theam_1267 a825fb99ecf9532f683a40d4f01a8509 235 Pfam PF03167 Uracil DNA glycosylase superfamily 73 222 4.4E-46 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Theam_1090 b737efdeb0d932277d4db8d27ce2815f 977 Gene3D G3DSA:3.10.560.10 235 322 3.5E-17 T 13-10-2018 Theam_1090 b737efdeb0d932277d4db8d27ce2815f 977 Gene3D G3DSA:3.10.560.10 850 945 1.4E-14 T 13-10-2018 Theam_1090 b737efdeb0d932277d4db8d27ce2815f 977 Gene3D G3DSA:3.10.560.10 702 789 1.6E-10 T 13-10-2018 Theam_1090 b737efdeb0d932277d4db8d27ce2815f 977 Gene3D G3DSA:3.10.560.10 325 406 1.0E-8 T 13-10-2018 Theam_1090 b737efdeb0d932277d4db8d27ce2815f 977 SUPERFAMILY SSF142984 326 364 1.83E-5 T 13-10-2018 Theam_1090 b737efdeb0d932277d4db8d27ce2815f 977 Pfam PF02563 Polysaccharide biosynthesis/export protein 162 229 1.4E-9 T 13-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Theam_1090 b737efdeb0d932277d4db8d27ce2815f 977 Pfam PF10531 SLBB domain 710 752 3.8E-7 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1090 b737efdeb0d932277d4db8d27ce2815f 977 Pfam PF10531 SLBB domain 330 369 1.4E-8 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1090 b737efdeb0d932277d4db8d27ce2815f 977 Pfam PF10531 SLBB domain 243 289 2.7E-9 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1090 b737efdeb0d932277d4db8d27ce2815f 977 Pfam PF10531 SLBB domain 858 902 5.8E-10 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0398 82d8b7eebf742d35542c35efc42d6299 161 SUPERFAMILY SSF56300 2 158 5.63E-35 T 13-10-2018 Theam_0398 82d8b7eebf742d35542c35efc42d6299 161 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 152 1.1E-28 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Theam_0398 82d8b7eebf742d35542c35efc42d6299 161 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 157 4.1E-34 T 13-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 Theam_0398 82d8b7eebf742d35542c35efc42d6299 161 Gene3D G3DSA:3.60.21.10 1 158 1.0E-42 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Theam_1276 a6caa5bca39165fa9e16e8db3e298435 441 Gene3D G3DSA:1.20.1600.10 18 435 3.5E-98 T 13-10-2018 Theam_1276 a6caa5bca39165fa9e16e8db3e298435 441 Pfam PF02321 Outer membrane efflux protein 246 430 4.3E-39 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Theam_1276 a6caa5bca39165fa9e16e8db3e298435 441 Pfam PF02321 Outer membrane efflux protein 21 224 1.1E-37 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Theam_1276 a6caa5bca39165fa9e16e8db3e298435 441 PIRSF PIRSF001892 115 438 4.5E-56 T 13-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 Theam_1276 a6caa5bca39165fa9e16e8db3e298435 441 PIRSF PIRSF001892 1 149 2.3E-10 T 13-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 Theam_1276 a6caa5bca39165fa9e16e8db3e298435 441 SUPERFAMILY SSF56954 3 433 4.05E-94 T 13-10-2018 Theam_0439 f0720bad3be6dfc260cb10ae71fd9e95 423 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 163 368 1.7E-25 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_0439 f0720bad3be6dfc260cb10ae71fd9e95 423 SUPERFAMILY SSF68912 10 53 1.22E-5 T 13-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Theam_0439 f0720bad3be6dfc260cb10ae71fd9e95 423 Pfam PF07497 Rho termination factor, RNA-binding domain 60 132 8.9E-32 T 13-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Theam_0439 f0720bad3be6dfc260cb10ae71fd9e95 423 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 423 224.653 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Theam_0439 f0720bad3be6dfc260cb10ae71fd9e95 423 SUPERFAMILY SSF50249 56 132 2.97E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0439 f0720bad3be6dfc260cb10ae71fd9e95 423 Gene3D G3DSA:3.40.50.300 138 422 8.4E-128 T 13-10-2018 Theam_0439 f0720bad3be6dfc260cb10ae71fd9e95 423 Gene3D G3DSA:2.40.50.140 7 136 1.4E-46 T 13-10-2018 Theam_0439 f0720bad3be6dfc260cb10ae71fd9e95 423 SUPERFAMILY SSF52540 97 376 1.85E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0439 f0720bad3be6dfc260cb10ae71fd9e95 423 TIGRFAM TIGR00767 rho: transcription termination factor Rho 11 422 8.7E-209 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Theam_0439 f0720bad3be6dfc260cb10ae71fd9e95 423 SMART SM00382 174 360 1.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0439 f0720bad3be6dfc260cb10ae71fd9e95 423 SMART SM00357 59 125 3.6E-19 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Theam_0439 f0720bad3be6dfc260cb10ae71fd9e95 423 Pfam PF07498 Rho termination factor, N-terminal domain 13 52 9.8E-8 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Theam_0439 f0720bad3be6dfc260cb10ae71fd9e95 423 SMART SM00959 13 54 1.4E-7 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Theam_1060 06dde876d1b103dcc7c9793e194034a8 307 Gene3D G3DSA:3.30.230.20 2 128 4.3E-45 T 13-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Theam_1060 06dde876d1b103dcc7c9793e194034a8 307 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 5 275 7.4E-99 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Theam_1060 06dde876d1b103dcc7c9793e194034a8 307 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 3 279 40.942 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Theam_1060 06dde876d1b103dcc7c9793e194034a8 307 SUPERFAMILY SSF54211 4 125 9.86E-37 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_1060 06dde876d1b103dcc7c9793e194034a8 307 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 4 289 1.7E-92 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Theam_1060 06dde876d1b103dcc7c9793e194034a8 307 SUPERFAMILY SSF54211 134 276 2.58E-45 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_1060 06dde876d1b103dcc7c9793e194034a8 307 Gene3D G3DSA:3.30.1700.10 129 297 2.1E-57 T 13-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 SUPERFAMILY SSF51419 7 228 1.3E-55 T 13-10-2018 IPR029066 PLP-binding barrel Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 Gene3D G3DSA:3.20.20.10 9 220 2.1E-109 T 13-10-2018 IPR029066 PLP-binding barrel Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 PRINTS PR00992 Alanine racemase signature 62 80 5.5E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 PRINTS PR00992 Alanine racemase signature 25 41 5.5E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 PRINTS PR00992 Alanine racemase signature 260 275 5.5E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 PRINTS PR00992 Alanine racemase signature 243 258 5.5E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 PRINTS PR00992 Alanine racemase signature 189 216 5.5E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 PRINTS PR00992 Alanine racemase signature 117 129 5.5E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 PRINTS PR00992 Alanine racemase signature 281 298 5.5E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 PRINTS PR00992 Alanine racemase signature 332 345 5.5E-52 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 Pfam PF01168 Alanine racemase, N-terminal domain 7 216 3.2E-55 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 SUPERFAMILY SSF50621 220 351 1.71E-44 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 13-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 SMART SM01005 227 350 7.2E-57 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 TIGRFAM TIGR00492 alr: alanine racemase 4 349 4.2E-88 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 Gene3D G3DSA:2.40.37.10 4 349 2.1E-109 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 Pfam PF00842 Alanine racemase, C-terminal domain 227 349 5.0E-42 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Theam_0331 5b368a1f846b7cd9581d613a45e4ae19 357 Hamap MF_01201 Alanine racemase. 2 350 29.72 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Theam_1671 98c8e4653e5f3cada90bd0fb370dc43a 90 SUPERFAMILY SSF47413 20 86 1.0E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Theam_1671 98c8e4653e5f3cada90bd0fb370dc43a 90 Pfam PF01381 Helix-turn-helix 29 78 1.2E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Theam_1671 98c8e4653e5f3cada90bd0fb370dc43a 90 Gene3D G3DSA:1.10.260.40 18 80 1.6E-12 T 13-10-2018 Theam_1671 98c8e4653e5f3cada90bd0fb370dc43a 90 SMART SM00530 28 82 8.6E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Theam_0334 c9be2d2bb2aadb2470e832a13e0d72d0 636 Pfam PF03235 Protein of unknown function DUF262 18 278 8.6E-27 T 13-10-2018 IPR004919 Domain of unknown function DUF262 Theam_0801 18d3572fe99df9e9e469a1758e6659a7 446 Gene3D G3DSA:3.40.50.720 2 87 2.1E-34 T 13-10-2018 Theam_0801 18d3572fe99df9e9e469a1758e6659a7 446 Pfam PF08245 Mur ligase middle domain 105 284 1.2E-24 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Theam_0801 18d3572fe99df9e9e469a1758e6659a7 446 Gene3D G3DSA:3.40.1190.10 89 301 1.5E-69 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Theam_0801 18d3572fe99df9e9e469a1758e6659a7 446 Pfam PF01225 Mur ligase family, catalytic domain 2 99 3.9E-27 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Theam_0801 18d3572fe99df9e9e469a1758e6659a7 446 SUPERFAMILY SSF51984 2 87 4.97E-30 T 13-10-2018 Theam_0801 18d3572fe99df9e9e469a1758e6659a7 446 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 446 38.549 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0801 18d3572fe99df9e9e469a1758e6659a7 446 Gene3D G3DSA:3.90.190.20 302 445 2.6E-45 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Theam_0801 18d3572fe99df9e9e469a1758e6659a7 446 SUPERFAMILY SSF53623 86 302 4.01E-66 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Theam_0801 18d3572fe99df9e9e469a1758e6659a7 446 Pfam PF02875 Mur ligase family, glutamate ligase domain 305 391 2.9E-19 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Theam_0801 18d3572fe99df9e9e469a1758e6659a7 446 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 2 436 7.9E-153 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0801 18d3572fe99df9e9e469a1758e6659a7 446 SUPERFAMILY SSF53244 305 438 2.88E-39 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Theam_0992 565aeb9d510ca9a362d3e42a3c4e1816 368 SUPERFAMILY SSF53383 3 363 4.75E-93 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Theam_0992 565aeb9d510ca9a362d3e42a3c4e1816 368 Gene3D G3DSA:3.90.1150.10 32 355 1.8E-114 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Theam_0992 565aeb9d510ca9a362d3e42a3c4e1816 368 Gene3D G3DSA:3.40.640.10 48 277 1.8E-114 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Theam_0992 565aeb9d510ca9a362d3e42a3c4e1816 368 Pfam PF00155 Aminotransferase class I and II 37 360 2.7E-57 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Theam_0992 565aeb9d510ca9a362d3e42a3c4e1816 368 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 227 236 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Theam_1555 0e5f4abb1af733e6483609103f1493dc 168 Pfam PF08534 Redoxin 21 161 7.0E-18 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Theam_1555 0e5f4abb1af733e6483609103f1493dc 168 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 13-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 Theam_1555 0e5f4abb1af733e6483609103f1493dc 168 Hamap MF_00269 Thiol peroxidase [tpx]. 4 165 33.876 T 13-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 Theam_1555 0e5f4abb1af733e6483609103f1493dc 168 SUPERFAMILY SSF52833 4 161 3.82E-35 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Theam_1555 0e5f4abb1af733e6483609103f1493dc 168 Gene3D G3DSA:3.40.30.10 2 167 2.4E-40 T 13-10-2018 Theam_1237 674d71ad9c04eb4f067bebabd3a877d5 212 SUPERFAMILY SSF52172 2 123 1.41E-36 T 13-10-2018 IPR011006 CheY-like superfamily Theam_1237 674d71ad9c04eb4f067bebabd3a877d5 212 SMART SM00448 1 114 5.6E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_1237 674d71ad9c04eb4f067bebabd3a877d5 212 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 210 3.0E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Theam_1237 674d71ad9c04eb4f067bebabd3a877d5 212 Gene3D G3DSA:3.40.50.2300 1 123 5.2E-34 T 13-10-2018 Theam_1237 674d71ad9c04eb4f067bebabd3a877d5 212 SUPERFAMILY SSF46894 133 211 1.76E-20 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Theam_1237 674d71ad9c04eb4f067bebabd3a877d5 212 Pfam PF00072 Response regulator receiver domain 3 115 2.6E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_1237 674d71ad9c04eb4f067bebabd3a877d5 212 Gene3D G3DSA:1.10.10.10 126 212 1.1E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_1237 674d71ad9c04eb4f067bebabd3a877d5 212 SMART SM00862 142 211 1.3E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Theam_1408 3d800fc7cd7bece77600095cfe3c6b25 389 SUPERFAMILY SSF56059 1 237 7.42E-80 T 13-10-2018 Theam_1408 3d800fc7cd7bece77600095cfe3c6b25 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.7E-170 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Theam_1408 3d800fc7cd7bece77600095cfe3c6b25 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 13-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Theam_1408 3d800fc7cd7bece77600095cfe3c6b25 389 Gene3D G3DSA:3.30.470.20 1 234 1.6E-96 T 13-10-2018 Theam_1408 3d800fc7cd7bece77600095cfe3c6b25 389 Gene3D G3DSA:3.30.1490.20 21 103 1.6E-96 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Theam_1408 3d800fc7cd7bece77600095cfe3c6b25 389 PIRSF PIRSF001554 1 388 1.1E-155 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Theam_1408 3d800fc7cd7bece77600095cfe3c6b25 389 Gene3D G3DSA:3.40.50.261 240 388 6.1E-58 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Theam_1408 3d800fc7cd7bece77600095cfe3c6b25 389 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 45.107 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Theam_1408 3d800fc7cd7bece77600095cfe3c6b25 389 SUPERFAMILY SSF52210 239 385 2.35E-54 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Theam_1408 3d800fc7cd7bece77600095cfe3c6b25 389 Pfam PF08442 ATP-grasp domain 2 202 2.6E-79 T 13-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Theam_1408 3d800fc7cd7bece77600095cfe3c6b25 389 Pfam PF00549 CoA-ligase 262 382 2.3E-24 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Theam_1459 c82a360e0b2a81b6c0fdec626d6a5f1e 693 Gene3D G3DSA:3.40.30.60 333 447 1.7E-33 T 13-10-2018 Theam_1459 c82a360e0b2a81b6c0fdec626d6a5f1e 693 Gene3D G3DSA:1.10.8.540 477 592 2.1E-22 T 13-10-2018 Theam_1459 c82a360e0b2a81b6c0fdec626d6a5f1e 693 Pfam PF00771 FHIPEP family 27 682 6.5E-270 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Theam_1459 c82a360e0b2a81b6c0fdec626d6a5f1e 693 Gene3D G3DSA:1.10.490.80 593 690 2.5E-20 T 13-10-2018 Theam_1459 c82a360e0b2a81b6c0fdec626d6a5f1e 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 187 204 1.5E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Theam_1459 c82a360e0b2a81b6c0fdec626d6a5f1e 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 157 175 1.5E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Theam_1459 c82a360e0b2a81b6c0fdec626d6a5f1e 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 1.5E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Theam_1459 c82a360e0b2a81b6c0fdec626d6a5f1e 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 138 154 1.5E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Theam_1459 c82a360e0b2a81b6c0fdec626d6a5f1e 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 238 252 1.5E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Theam_1459 c82a360e0b2a81b6c0fdec626d6a5f1e 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 1.5E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Theam_1459 c82a360e0b2a81b6c0fdec626d6a5f1e 693 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 17 690 1.8E-276 T 13-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 Theam_1459 c82a360e0b2a81b6c0fdec626d6a5f1e 693 PIRSF PIRSF005419 2 693 5.8E-272 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Theam_1459 c82a360e0b2a81b6c0fdec626d6a5f1e 693 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 143 166 - T 13-10-2018 IPR025505 FHIPEP conserved site Theam_0753 604f712f43aa8d48537d1306a454767b 1086 Gene3D G3DSA:1.20.1640.10 534 1075 1.2E-255 T 13-10-2018 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 SUPERFAMILY SSF82693 142 348 4.71E-12 T 13-10-2018 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 SUPERFAMILY SSF82693 587 688 1.67E-12 T 13-10-2018 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 SUPERFAMILY SSF82714 752 836 3.27E-10 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Theam_0753 604f712f43aa8d48537d1306a454767b 1086 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 1.4E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 PRINTS PR00702 Acriflavin resistance protein family signature 490 513 1.4E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 PRINTS PR00702 Acriflavin resistance protein family signature 46 64 1.4E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 PRINTS PR00702 Acriflavin resistance protein family signature 383 404 1.4E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 PRINTS PR00702 Acriflavin resistance protein family signature 411 435 1.4E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 Gene3D G3DSA:3.30.70.1430 589 696 1.2E-255 T 13-10-2018 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 Pfam PF00873 AcrB/AcrD/AcrF family 22 1078 4.5E-163 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 Gene3D G3DSA:3.30.70.1430 48 848 1.2E-255 T 13-10-2018 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 Gene3D G3DSA:3.30.70.1440 697 917 1.2E-255 T 13-10-2018 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 Gene3D G3DSA:1.20.1640.10 24 533 1.2E-255 T 13-10-2018 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 Gene3D G3DSA:3.30.2090.10 750 840 1.2E-255 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Theam_0753 604f712f43aa8d48537d1306a454767b 1086 SUPERFAMILY SSF82693 48 142 7.32E-23 T 13-10-2018 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 SUPERFAMILY SSF82714 191 271 2.22E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Theam_0753 604f712f43aa8d48537d1306a454767b 1086 Gene3D G3DSA:3.30.2090.10 185 275 1.2E-255 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Theam_0753 604f712f43aa8d48537d1306a454767b 1086 Gene3D G3DSA:3.30.70.1320 142 353 1.2E-255 T 13-10-2018 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 SUPERFAMILY SSF82866 839 1084 2.35E-42 T 13-10-2018 Theam_0753 604f712f43aa8d48537d1306a454767b 1086 SUPERFAMILY SSF82866 316 516 1.19E-39 T 13-10-2018 Theam_1702 d486b2a14f29675a54e054c21b61c42f 376 Gene3D G3DSA:3.80.30.20 2 293 4.4E-90 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Theam_1702 d486b2a14f29675a54e054c21b61c42f 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 319 1.8E-71 T 13-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 Theam_1702 d486b2a14f29675a54e054c21b61c42f 376 SUPERFAMILY SSF102114 7 369 8.5E-96 T 13-10-2018 Theam_1702 d486b2a14f29675a54e054c21b61c42f 376 SMART SM00729 5 214 4.1E-50 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_1702 d486b2a14f29675a54e054c21b61c42f 376 Pfam PF04055 Radical SAM superfamily 10 168 5.9E-20 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_1454 65fce028a5ddaf2b2015f165a41413f7 650 Pfam PF13432 Tetratricopeptide repeat 229 286 5.9E-5 T 13-10-2018 Theam_1454 65fce028a5ddaf2b2015f165a41413f7 650 Gene3D G3DSA:1.25.40.10 17 152 1.5E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1454 65fce028a5ddaf2b2015f165a41413f7 650 SMART SM00028 218 251 120.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1454 65fce028a5ddaf2b2015f165a41413f7 650 SMART SM00028 255 288 45.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1454 65fce028a5ddaf2b2015f165a41413f7 650 SMART SM00028 27 60 96.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1454 65fce028a5ddaf2b2015f165a41413f7 650 SMART SM00028 180 213 10.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1454 65fce028a5ddaf2b2015f165a41413f7 650 SMART SM00028 106 139 110.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1454 65fce028a5ddaf2b2015f165a41413f7 650 Gene3D G3DSA:1.25.40.10 181 301 2.3E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1454 65fce028a5ddaf2b2015f165a41413f7 650 SUPERFAMILY SSF48452 28 132 1.86E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1454 65fce028a5ddaf2b2015f165a41413f7 650 SUPERFAMILY SSF48452 181 331 3.48E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0832 f67c0cdd00ef315433c201ad7c5d8bdc 382 SUPERFAMILY SSF82689 272 365 3.4E-27 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Theam_0832 f67c0cdd00ef315433c201ad7c5d8bdc 382 Gene3D G3DSA:2.30.30.60 210 262 7.4E-9 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Theam_0832 f67c0cdd00ef315433c201ad7c5d8bdc 382 SUPERFAMILY SSF50182 194 261 2.88E-14 T 13-10-2018 IPR010920 LSM domain superfamily Theam_0832 f67c0cdd00ef315433c201ad7c5d8bdc 382 SUPERFAMILY SSF82861 109 193 2.88E-12 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Theam_0832 f67c0cdd00ef315433c201ad7c5d8bdc 382 Gene3D G3DSA:3.30.70.100 266 358 2.7E-24 T 13-10-2018 Theam_0832 f67c0cdd00ef315433c201ad7c5d8bdc 382 Pfam PF00924 Mechanosensitive ion channel 152 354 1.2E-52 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.0E-4 T 13-10-2018 Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 1.0E-4 T 13-10-2018 Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 Pfam PF00890 FAD binding domain 5 384 3.0E-113 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 5 564 1.2E-240 T 13-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.7E-9 T 13-10-2018 Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 3.7E-9 T 13-10-2018 Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 SUPERFAMILY SSF46977 429 564 3.14E-48 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 40 49 - T 13-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 Gene3D G3DSA:3.50.50.60 5 394 3.7E-157 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 Gene3D G3DSA:3.90.700.10 236 339 3.7E-157 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 SUPERFAMILY SSF51905 2 406 4.21E-77 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 SUPERFAMILY SSF56425 226 344 1.79E-43 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 Pfam PF02910 Fumarate reductase flavoprotein C-term 438 564 3.3E-41 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 Gene3D G3DSA:1.20.58.100 411 525 1.8E-34 T 13-10-2018 Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 PIRSF PIRSF000171 1 561 1.5E-52 T 13-10-2018 Theam_1272 8ab37fca05bd19461fdf1ddcb430af6c 564 Gene3D G3DSA:4.10.80.40 526 560 4.1E-8 T 13-10-2018 Theam_1701 a0740aaffc3b9d2937db08d13f812851 499 SUPERFAMILY SSF48452 71 476 1.02E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1701 a0740aaffc3b9d2937db08d13f812851 499 SMART SM00028 171 204 44.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1701 a0740aaffc3b9d2937db08d13f812851 499 SMART SM00028 97 130 370.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1701 a0740aaffc3b9d2937db08d13f812851 499 SMART SM00028 268 301 280.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1701 a0740aaffc3b9d2937db08d13f812851 499 SMART SM00028 450 483 18.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1701 a0740aaffc3b9d2937db08d13f812851 499 SMART SM00028 379 412 82.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1701 a0740aaffc3b9d2937db08d13f812851 499 Gene3D G3DSA:1.25.40.10 14 128 1.7E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1701 a0740aaffc3b9d2937db08d13f812851 499 Pfam PF13181 Tetratricopeptide repeat 174 203 0.013 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1701 a0740aaffc3b9d2937db08d13f812851 499 Pfam PF13181 Tetratricopeptide repeat 271 295 0.017 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 SUPERFAMILY SSF55957 358 443 1.44E-21 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 Gene3D G3DSA:3.40.120.10 177 362 1.7E-63 T 13-10-2018 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 3.8E-15 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 Gene3D G3DSA:3.40.120.10 4 151 3.6E-49 T 13-10-2018 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 SUPERFAMILY SSF53738 4 169 9.42E-43 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 SUPERFAMILY SSF53738 161 259 3.92E-25 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 Gene3D G3DSA:3.30.310.50 370 445 3.9E-24 T 13-10-2018 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 442 9.2E-155 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 2.1E-42 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 163 257 4.2E-15 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 100 109 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 177 196 2.6E-13 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 237 252 2.6E-13 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 2.6E-13 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 367 2.6E-29 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 Gene3D G3DSA:3.40.120.10 260 339 1.7E-63 T 13-10-2018 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 444 40.735 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_0890 afac785445fd1e8ce7b48dc21eb82b65 449 SUPERFAMILY SSF53738 261 363 1.61E-26 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_1531 b7b44b13eeedd672daa681054a8fc391 401 Gene3D G3DSA:3.40.1190.10 4 265 3.5E-69 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Theam_1531 b7b44b13eeedd672daa681054a8fc391 401 PIRSF PIRSF001563 2 401 3.3E-85 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Theam_1531 b7b44b13eeedd672daa681054a8fc391 401 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 130 145 - T 13-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Theam_1531 b7b44b13eeedd672daa681054a8fc391 401 TIGRFAM TIGR01499 folC: bifunctional protein FolC 20 398 3.2E-78 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Theam_1531 b7b44b13eeedd672daa681054a8fc391 401 Gene3D G3DSA:3.90.190.20 278 401 8.6E-14 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Theam_1531 b7b44b13eeedd672daa681054a8fc391 401 SUPERFAMILY SSF53244 278 395 3.43E-12 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Theam_1531 b7b44b13eeedd672daa681054a8fc391 401 Pfam PF08245 Mur ligase middle domain 40 253 1.2E-11 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Theam_1531 b7b44b13eeedd672daa681054a8fc391 401 SUPERFAMILY SSF53623 15 258 5.89E-68 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Theam_1213 4070c9690ed09c8874004a5fc56b298b 245 Gene3D G3DSA:3.60.110.10 3 245 2.7E-51 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Theam_1213 4070c9690ed09c8874004a5fc56b298b 245 SUPERFAMILY SSF56317 6 243 1.96E-49 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Theam_1213 4070c9690ed09c8874004a5fc56b298b 245 Pfam PF00795 Carbon-nitrogen hydrolase 8 238 1.3E-28 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Theam_0663 7277658cbb581dbe13ffd1a70c6eed31 259 Pfam PF00459 Inositol monophosphatase family 2 244 4.7E-49 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Theam_0663 7277658cbb581dbe13ffd1a70c6eed31 259 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 4 255 41.649 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Theam_0663 7277658cbb581dbe13ffd1a70c6eed31 259 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Theam_0663 7277658cbb581dbe13ffd1a70c6eed31 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 6.8E-10 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Theam_0663 7277658cbb581dbe13ffd1a70c6eed31 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 6.8E-10 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Theam_0663 7277658cbb581dbe13ffd1a70c6eed31 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 6.8E-10 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Theam_0663 7277658cbb581dbe13ffd1a70c6eed31 259 SUPERFAMILY SSF56655 1 252 7.07E-77 T 13-10-2018 Theam_0663 7277658cbb581dbe13ffd1a70c6eed31 259 Gene3D G3DSA:3.40.190.80 151 255 4.6E-41 T 13-10-2018 Theam_0663 7277658cbb581dbe13ffd1a70c6eed31 259 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 8 252 8.2E-88 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Theam_0663 7277658cbb581dbe13ffd1a70c6eed31 259 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 13-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Theam_0663 7277658cbb581dbe13ffd1a70c6eed31 259 Gene3D G3DSA:3.30.540.10 1 145 1.5E-48 T 13-10-2018 Theam_1715 6589389fbfd4844c23d08f3e9cf7726c 317 SUPERFAMILY SSF52540 22 201 3.19E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1715 6589389fbfd4844c23d08f3e9cf7726c 317 Gene3D G3DSA:1.10.8.60 141 200 1.0E-5 T 13-10-2018 Theam_1715 6589389fbfd4844c23d08f3e9cf7726c 317 Gene3D G3DSA:1.20.272.10 205 314 1.9E-10 T 13-10-2018 Theam_1715 6589389fbfd4844c23d08f3e9cf7726c 317 SUPERFAMILY SSF48019 207 310 9.35E-9 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Theam_1507 0d8fb1f700ea5aa907ea17644054a480 134 Pfam PF14229 Domain of unknown function (DUF4332) 8 128 4.4E-45 T 13-10-2018 IPR025567 Domain of unknown function DUF4332 KEGG: 00970+6.1.1.6 Theam_1507 0d8fb1f700ea5aa907ea17644054a480 134 Gene3D G3DSA:1.10.150.20 62 131 1.2E-8 T 13-10-2018 Theam_1507 0d8fb1f700ea5aa907ea17644054a480 134 Gene3D G3DSA:1.10.150.20 4 61 3.2E-12 T 13-10-2018 Theam_1507 0d8fb1f700ea5aa907ea17644054a480 134 SMART SM00278 60 79 99.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Theam_1507 0d8fb1f700ea5aa907ea17644054a480 134 SMART SM00278 2 21 22.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Theam_0376 dc7a3c84255c11a17d8aa4a761e49171 669 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 5 224 2.6E-33 T 13-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Theam_0376 dc7a3c84255c11a17d8aa4a761e49171 669 SMART SM00790 1 225 2.7E-39 T 13-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Theam_0376 dc7a3c84255c11a17d8aa4a761e49171 669 Gene3D G3DSA:3.60.9.10 2 226 5.3E-19 T 13-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Theam_0376 dc7a3c84255c11a17d8aa4a761e49171 669 SUPERFAMILY SSF48310 252 666 2.49E-56 T 13-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Theam_0376 dc7a3c84255c11a17d8aa4a761e49171 669 SUPERFAMILY SSF56228 4 224 1.7E-36 T 13-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Theam_0376 dc7a3c84255c11a17d8aa4a761e49171 669 Gene3D G3DSA:1.10.569.10 272 482 2.4E-15 T 13-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Theam_0376 dc7a3c84255c11a17d8aa4a761e49171 669 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 268 589 2.3E-18 T 13-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Theam_1407 709e0d165a1eb81ea0c42e71f73cc1e9 707 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 572 675 2.5E-14 T 13-10-2018 IPR000160 GGDEF domain Theam_1407 709e0d165a1eb81ea0c42e71f73cc1e9 707 Pfam PF00990 Diguanylate cyclase, GGDEF domain 573 674 1.0E-13 T 13-10-2018 IPR000160 GGDEF domain Theam_1407 709e0d165a1eb81ea0c42e71f73cc1e9 707 SUPERFAMILY SSF109604 362 541 8.98E-43 T 13-10-2018 Theam_1407 709e0d165a1eb81ea0c42e71f73cc1e9 707 SUPERFAMILY SSF55073 576 674 1.1E-12 T 13-10-2018 IPR029787 Nucleotide cyclase Theam_1407 709e0d165a1eb81ea0c42e71f73cc1e9 707 Gene3D G3DSA:3.30.70.270 559 689 8.5E-17 T 13-10-2018 Theam_1407 709e0d165a1eb81ea0c42e71f73cc1e9 707 Pfam PF01966 HD domain 384 503 3.9E-25 T 13-10-2018 IPR006674 HD domain Theam_1407 709e0d165a1eb81ea0c42e71f73cc1e9 707 SMART SM00267 560 707 5.9E-5 T 13-10-2018 IPR000160 GGDEF domain Theam_1407 709e0d165a1eb81ea0c42e71f73cc1e9 707 SMART SM00471 378 512 4.5E-15 T 13-10-2018 IPR003607 HD/PDEase domain Theam_1407 709e0d165a1eb81ea0c42e71f73cc1e9 707 SMART SM00304 144 195 1.5E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Theam_1407 709e0d165a1eb81ea0c42e71f73cc1e9 707 Gene3D G3DSA:1.20.1480.50 106 199 5.1E-5 T 13-10-2018 Theam_1407 709e0d165a1eb81ea0c42e71f73cc1e9 707 Gene3D G3DSA:1.10.3210.10 260 544 7.4E-72 T 13-10-2018 Theam_0487 7e745c7f9c2cf8d66da07c3049345b30 355 Pfam PF17179 4Fe-4S dicluster domain 238 333 9.2E-28 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_0487 7e745c7f9c2cf8d66da07c3049345b30 355 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 319 330 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0487 7e745c7f9c2cf8d66da07c3049345b30 355 SUPERFAMILY SSF46548 230 349 7.32E-15 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Theam_0487 7e745c7f9c2cf8d66da07c3049345b30 355 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 239 250 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0993 6920e809e236f3329a7c6eaaf66d0041 192 Gene3D G3DSA:3.40.50.2300 1 128 2.1E-36 T 13-10-2018 Theam_0993 6920e809e236f3329a7c6eaaf66d0041 192 Pfam PF02954 Bacterial regulatory protein, Fis family 142 182 2.7E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Theam_0993 6920e809e236f3329a7c6eaaf66d0041 192 SUPERFAMILY SSF46689 129 185 3.99E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Theam_0993 6920e809e236f3329a7c6eaaf66d0041 192 SMART SM00448 1 114 6.8E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_0993 6920e809e236f3329a7c6eaaf66d0041 192 Gene3D G3DSA:1.10.10.60 131 186 2.7E-18 T 13-10-2018 Theam_0993 6920e809e236f3329a7c6eaaf66d0041 192 Pfam PF00072 Response regulator receiver domain 3 115 7.9E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_0993 6920e809e236f3329a7c6eaaf66d0041 192 SUPERFAMILY SSF52172 1 143 2.99E-37 T 13-10-2018 IPR011006 CheY-like superfamily Theam_0116 a75b81b8c5317798c0fab03b64fab2d6 118 Pfam PF03259 Roadblock/LC7 domain 7 96 4.4E-16 T 13-10-2018 IPR004942 Roadblock/LAMTOR2 domain Theam_0116 a75b81b8c5317798c0fab03b64fab2d6 118 SUPERFAMILY SSF103196 1 115 1.28E-20 T 13-10-2018 Theam_0116 a75b81b8c5317798c0fab03b64fab2d6 118 Gene3D G3DSA:3.30.450.30 2 118 4.4E-24 T 13-10-2018 Theam_0116 a75b81b8c5317798c0fab03b64fab2d6 118 SMART SM00960 7 96 1.3E-19 T 13-10-2018 IPR004942 Roadblock/LAMTOR2 domain Theam_1718 5c992d67dca60f75767c05e21e1a41a9 124 Pfam PF03259 Roadblock/LC7 domain 13 101 1.3E-11 T 13-10-2018 IPR004942 Roadblock/LAMTOR2 domain Theam_1718 5c992d67dca60f75767c05e21e1a41a9 124 SUPERFAMILY SSF103196 9 123 2.96E-20 T 13-10-2018 Theam_1718 5c992d67dca60f75767c05e21e1a41a9 124 Gene3D G3DSA:3.30.450.30 12 124 1.3E-19 T 13-10-2018 Theam_1718 5c992d67dca60f75767c05e21e1a41a9 124 SMART SM00960 12 101 2.1E-14 T 13-10-2018 IPR004942 Roadblock/LAMTOR2 domain Theam_1113 2616407653d3e595d0d4b53e2b9f1b8d 463 SUPERFAMILY SSF102114 268 446 6.02E-24 T 13-10-2018 Theam_1113 2616407653d3e595d0d4b53e2b9f1b8d 463 SUPERFAMILY SSF51556 2 252 3.59E-82 T 13-10-2018 IPR032466 Metal-dependent hydrolase Theam_1113 2616407653d3e595d0d4b53e2b9f1b8d 463 Pfam PF13394 4Fe-4S single cluster domain 272 367 4.2E-7 T 13-10-2018 Theam_1113 2616407653d3e595d0d4b53e2b9f1b8d 463 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 187 203 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Theam_1113 2616407653d3e595d0d4b53e2b9f1b8d 463 Pfam PF01026 TatD related DNase 2 251 1.3E-77 T 13-10-2018 IPR001130 TatD family GO:0016788 Theam_1113 2616407653d3e595d0d4b53e2b9f1b8d 463 Pfam PF04055 Radical SAM superfamily 274 445 7.5E-16 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_1113 2616407653d3e595d0d4b53e2b9f1b8d 463 Gene3D G3DSA:3.20.20.70 266 463 4.6E-24 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1113 2616407653d3e595d0d4b53e2b9f1b8d 463 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 251 3.0E-85 T 13-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Theam_1113 2616407653d3e595d0d4b53e2b9f1b8d 463 Gene3D G3DSA:3.20.20.140 1 251 2.2E-95 T 13-10-2018 Theam_1113 2616407653d3e595d0d4b53e2b9f1b8d 463 TIGRFAM TIGR04038 tatD_link_rSAM: radical SAM protein, TatD family-associated 263 455 5.7E-58 T 13-10-2018 IPR023821 Radical SAM, TatD-associated Theam_0338 1c1d26fec30a941cbf99d4b2c79ac6fd 343 SUPERFAMILY SSF55920 122 339 4.06E-70 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like Theam_0338 1c1d26fec30a941cbf99d4b2c79ac6fd 343 SUPERFAMILY SSF53092 15 120 8.89E-15 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Theam_0338 1c1d26fec30a941cbf99d4b2c79ac6fd 343 Gene3D G3DSA:3.40.350.10 13 121 4.6E-22 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Theam_0338 1c1d26fec30a941cbf99d4b2c79ac6fd 343 Pfam PF01321 Creatinase/Prolidase N-terminal domain 16 121 2.0E-15 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Theam_0338 1c1d26fec30a941cbf99d4b2c79ac6fd 343 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 278 290 - T 13-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Theam_0338 1c1d26fec30a941cbf99d4b2c79ac6fd 343 Pfam PF00557 Metallopeptidase family M24 130 331 1.4E-63 T 13-10-2018 IPR000994 Peptidase M24 Theam_0338 1c1d26fec30a941cbf99d4b2c79ac6fd 343 PRINTS PR00599 Methionine aminopeptidase-1 signature 202 218 8.4E-5 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Theam_0338 1c1d26fec30a941cbf99d4b2c79ac6fd 343 PRINTS PR00599 Methionine aminopeptidase-1 signature 300 312 8.4E-5 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Theam_0338 1c1d26fec30a941cbf99d4b2c79ac6fd 343 Gene3D G3DSA:3.90.230.10 123 342 6.2E-76 T 13-10-2018 Theam_1055 b71e71c86ad62d38830cd526879636f4 335 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 6 333 9.7E-96 T 13-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme Theam_1055 b71e71c86ad62d38830cd526879636f4 335 PIRSF PIRSF004869 2 312 9.5E-84 T 13-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted Theam_1055 b71e71c86ad62d38830cd526879636f4 335 Gene3D G3DSA:3.20.20.70 65 280 5.8E-30 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1055 b71e71c86ad62d38830cd526879636f4 335 Pfam PF04055 Radical SAM superfamily 81 237 3.9E-16 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_1055 b71e71c86ad62d38830cd526879636f4 335 SUPERFAMILY SSF102114 60 313 8.83E-27 T 13-10-2018 Theam_1221 82ded2fd8fe0888b57ec491e7b4558e9 548 Gene3D G3DSA:3.30.260.10 136 410 4.1E-233 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Theam_1221 82ded2fd8fe0888b57ec491e7b4558e9 548 Gene3D G3DSA:3.50.7.10 192 372 4.1E-233 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily Theam_1221 82ded2fd8fe0888b57ec491e7b4558e9 548 SUPERFAMILY SSF52029 184 376 1.5E-87 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily Theam_1221 82ded2fd8fe0888b57ec491e7b4558e9 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 532 6.5E-97 T 13-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Theam_1221 82ded2fd8fe0888b57ec491e7b4558e9 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 13-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Theam_1221 82ded2fd8fe0888b57ec491e7b4558e9 548 SUPERFAMILY SSF54849 137 203 1.69E-27 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Theam_1221 82ded2fd8fe0888b57ec491e7b4558e9 548 SUPERFAMILY SSF48592 7 530 3.05E-73 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily Theam_1221 82ded2fd8fe0888b57ec491e7b4558e9 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 4 536 4.2E-255 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Theam_1221 82ded2fd8fe0888b57ec491e7b4558e9 548 Gene3D G3DSA:1.10.560.10 8 530 4.1E-233 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily Theam_1221 82ded2fd8fe0888b57ec491e7b4558e9 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 545 40.981 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Theam_1221 82ded2fd8fe0888b57ec491e7b4558e9 548 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Theam_1221 82ded2fd8fe0888b57ec491e7b4558e9 548 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Theam_1221 82ded2fd8fe0888b57ec491e7b4558e9 548 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Theam_1221 82ded2fd8fe0888b57ec491e7b4558e9 548 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Theam_1221 82ded2fd8fe0888b57ec491e7b4558e9 548 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Theam_0158 259eb05beec5c25605ec1a76ed0d597e 428 SUPERFAMILY SSF50249 10 61 6.85E-8 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0158 259eb05beec5c25605ec1a76ed0d597e 428 SUPERFAMILY SSF53335 63 426 3.19E-62 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_0158 259eb05beec5c25605ec1a76ed0d597e 428 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 85 426 2.0E-23 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Theam_0158 259eb05beec5c25605ec1a76ed0d597e 428 Gene3D G3DSA:3.40.1350.30 123 259 4.8E-85 T 13-10-2018 Theam_0158 259eb05beec5c25605ec1a76ed0d597e 428 Gene3D G3DSA:3.40.50.150 76 421 4.8E-85 T 13-10-2018 Theam_0158 259eb05beec5c25605ec1a76ed0d597e 428 Gene3D G3DSA:2.40.50.140 8 74 1.9E-18 T 13-10-2018 Theam_0158 259eb05beec5c25605ec1a76ed0d597e 428 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 409 419 - T 13-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site Theam_0158 259eb05beec5c25605ec1a76ed0d597e 428 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 356 388 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site Theam_0090 6a12a7b25ba593a7a1dcf0fb6fa91c44 198 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Theam_0090 6a12a7b25ba593a7a1dcf0fb6fa91c44 198 Gene3D G3DSA:1.10.286.20 112 156 6.9E-64 T 13-10-2018 Theam_0090 6a12a7b25ba593a7a1dcf0fb6fa91c44 198 Hamap MF_00050 Elongation factor Ts [tsf]. 1 198 51.154 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Theam_0090 6a12a7b25ba593a7a1dcf0fb6fa91c44 198 Gene3D G3DSA:3.30.479.20 60 197 6.9E-64 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Theam_0090 6a12a7b25ba593a7a1dcf0fb6fa91c44 198 SUPERFAMILY SSF54713 57 197 9.42E-57 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Theam_0090 6a12a7b25ba593a7a1dcf0fb6fa91c44 198 Gene3D G3DSA:1.10.8.10 1 56 2.7E-27 T 13-10-2018 Theam_0090 6a12a7b25ba593a7a1dcf0fb6fa91c44 198 SUPERFAMILY SSF46934 4 55 4.67E-19 T 13-10-2018 IPR009060 UBA-like superfamily GO:0005515 Theam_0090 6a12a7b25ba593a7a1dcf0fb6fa91c44 198 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 93 197 2.0E-33 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Theam_0090 6a12a7b25ba593a7a1dcf0fb6fa91c44 198 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 96 9.6E-38 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Theam_0090 6a12a7b25ba593a7a1dcf0fb6fa91c44 198 Pfam PF00889 Elongation factor TS 36 198 8.7E-45 T 13-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Theam_0090 6a12a7b25ba593a7a1dcf0fb6fa91c44 198 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Theam_1448 9cd01dad35e6dbaf11c32c68f7f4b7f3 446 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 336 345 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_1448 9cd01dad35e6dbaf11c32c68f7f4b7f3 446 Gene3D G3DSA:3.40.50.12240 8 428 1.9E-136 T 13-10-2018 Theam_1448 9cd01dad35e6dbaf11c32c68f7f4b7f3 446 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 345 2.9E-70 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_1448 9cd01dad35e6dbaf11c32c68f7f4b7f3 446 SUPERFAMILY SSF52540 83 350 3.07E-88 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1448 9cd01dad35e6dbaf11c32c68f7f4b7f3 446 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 19 76 9.1E-6 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_1448 9cd01dad35e6dbaf11c32c68f7f4b7f3 446 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 6 424 1.2E-162 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_1448 9cd01dad35e6dbaf11c32c68f7f4b7f3 446 SMART SM00382 147 322 2.4E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0960 f9f9d39507c2ce5542a3980fc38814b7 413 SUPERFAMILY SSF51984 2 69 1.83E-10 T 13-10-2018 Theam_0960 f9f9d39507c2ce5542a3980fc38814b7 413 Pfam PF08245 Mur ligase middle domain 85 252 2.1E-29 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Theam_0960 f9f9d39507c2ce5542a3980fc38814b7 413 Pfam PF02875 Mur ligase family, glutamate ligase domain 274 340 3.5E-11 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Theam_0960 f9f9d39507c2ce5542a3980fc38814b7 413 SUPERFAMILY SSF53244 272 409 1.98E-45 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Theam_0960 f9f9d39507c2ce5542a3980fc38814b7 413 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 38 407 1.6E-116 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Theam_0960 f9f9d39507c2ce5542a3980fc38814b7 413 Gene3D G3DSA:3.40.50.720 28 67 2.9E-6 T 13-10-2018 Theam_0960 f9f9d39507c2ce5542a3980fc38814b7 413 SUPERFAMILY SSF53623 71 270 1.05E-46 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Theam_0960 f9f9d39507c2ce5542a3980fc38814b7 413 Gene3D G3DSA:3.40.1190.10 69 272 1.4E-53 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Theam_0960 f9f9d39507c2ce5542a3980fc38814b7 413 Gene3D G3DSA:3.90.190.20 278 413 4.3E-47 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Theam_0960 f9f9d39507c2ce5542a3980fc38814b7 413 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 1 409 32.95 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Theam_1179 38b5fa7c7c23bbf79dc9027f35d0c8a0 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.293 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Theam_1179 38b5fa7c7c23bbf79dc9027f35d0c8a0 65 Pfam PF01632 Ribosomal protein L35 2 61 7.7E-23 T 13-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1179 38b5fa7c7c23bbf79dc9027f35d0c8a0 65 Gene3D G3DSA:2.40.50.530 1 64 2.1E-20 T 13-10-2018 Theam_1179 38b5fa7c7c23bbf79dc9027f35d0c8a0 65 SUPERFAMILY SSF143034 2 64 1.57E-19 T 13-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1179 38b5fa7c7c23bbf79dc9027f35d0c8a0 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 13-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_1179 38b5fa7c7c23bbf79dc9027f35d0c8a0 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 3.9E-16 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Theam_1179 38b5fa7c7c23bbf79dc9027f35d0c8a0 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 3.9E-16 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Theam_1179 38b5fa7c7c23bbf79dc9027f35d0c8a0 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.9E-16 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Theam_1179 38b5fa7c7c23bbf79dc9027f35d0c8a0 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 2.1E-23 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Theam_1562 ae2cddaf10d5df5352a200f49b7bb04d 219 Pfam PF04055 Radical SAM superfamily 28 139 7.3E-16 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_1562 ae2cddaf10d5df5352a200f49b7bb04d 219 SUPERFAMILY SSF102114 23 129 1.7E-18 T 13-10-2018 Theam_1562 ae2cddaf10d5df5352a200f49b7bb04d 219 Pfam PF13353 4Fe-4S single cluster domain 18 136 3.2E-7 T 13-10-2018 Theam_1562 ae2cddaf10d5df5352a200f49b7bb04d 219 Gene3D G3DSA:3.20.20.70 23 219 1.7E-17 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0570 c425e2ebd14e638eac8ac458cbfdba75 410 SUPERFAMILY SSF55681 4 318 2.19E-94 T 13-10-2018 Theam_0570 c425e2ebd14e638eac8ac458cbfdba75 410 Pfam PF03129 Anticodon binding domain 332 401 1.5E-11 T 13-10-2018 IPR004154 Anticodon-binding Theam_0570 c425e2ebd14e638eac8ac458cbfdba75 410 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 401 3.2E-147 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Theam_0570 c425e2ebd14e638eac8ac458cbfdba75 410 SUPERFAMILY SSF52954 322 402 6.04E-20 T 13-10-2018 Theam_0570 c425e2ebd14e638eac8ac458cbfdba75 410 Gene3D G3DSA:3.30.930.10 1 319 2.2E-114 T 13-10-2018 Theam_0570 c425e2ebd14e638eac8ac458cbfdba75 410 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 409 31.949 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Theam_0570 c425e2ebd14e638eac8ac458cbfdba75 410 Pfam PF13393 Histidyl-tRNA synthetase 8 309 8.8E-52 T 13-10-2018 Theam_0570 c425e2ebd14e638eac8ac458cbfdba75 410 PIRSF PIRSF001549 1 410 4.8E-117 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Theam_0570 c425e2ebd14e638eac8ac458cbfdba75 410 Gene3D G3DSA:3.40.50.800 321 406 1.6E-22 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily Theam_0201 6599384fec2d003812209151a01bd510 423 Gene3D G3DSA:3.30.499.10 273 419 4.0E-55 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Theam_0201 6599384fec2d003812209151a01bd510 423 TIGRFAM TIGR02083 LEU2: 3-isopropylmalate dehydratase, large subunit 3 419 1.9E-223 T 13-10-2018 IPR011823 3-isopropylmalate dehydratase, large subunit, bacteria GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Theam_0201 6599384fec2d003812209151a01bd510 423 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 417 2.5E-191 T 13-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 Theam_0201 6599384fec2d003812209151a01bd510 423 Gene3D G3DSA:3.30.499.20 4 270 4.2E-108 T 13-10-2018 Theam_0201 6599384fec2d003812209151a01bd510 423 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 417 2.1E-165 T 13-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Theam_0201 6599384fec2d003812209151a01bd510 423 SUPERFAMILY SSF53732 1 419 3.66E-151 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Theam_0201 6599384fec2d003812209151a01bd510 423 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 419 51.178 T 13-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Theam_0201 6599384fec2d003812209151a01bd510 423 ProSitePatterns PS00450 Aconitase family signature 1. 292 308 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Theam_0201 6599384fec2d003812209151a01bd510 423 Pfam PF00330 Aconitase family (aconitate hydratase) 8 411 1.5E-103 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Theam_0201 6599384fec2d003812209151a01bd510 423 PRINTS PR00415 Aconitase family signature 190 203 3.3E-16 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Theam_0201 6599384fec2d003812209151a01bd510 423 PRINTS PR00415 Aconitase family signature 114 127 3.3E-16 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Theam_0201 6599384fec2d003812209151a01bd510 423 PRINTS PR00415 Aconitase family signature 352 365 3.3E-16 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Theam_0201 6599384fec2d003812209151a01bd510 423 PRINTS PR00415 Aconitase family signature 204 217 3.3E-16 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Theam_0201 6599384fec2d003812209151a01bd510 423 PRINTS PR00415 Aconitase family signature 128 143 3.3E-16 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Theam_0709 eaab2842ff75b749f977a1f81aa00c35 264 Gene3D G3DSA:3.20.20.60 1 264 8.0E-122 T 13-10-2018 Theam_0709 eaab2842ff75b749f977a1f81aa00c35 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 3 264 44.777 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Theam_0709 eaab2842ff75b749f977a1f81aa00c35 264 SUPERFAMILY SSF51621 2 264 1.61E-109 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Theam_0709 eaab2842ff75b749f977a1f81aa00c35 264 PIRSF PIRSF000388 1 264 6.3E-117 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Theam_0709 eaab2842ff75b749f977a1f81aa00c35 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 2 259 1.0E-117 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Theam_0709 eaab2842ff75b749f977a1f81aa00c35 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 4 264 6.5E-107 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Theam_0384 2686a0afd59815de5c081ef1dea7ec13 774 SUPERFAMILY SSF48695 60 568 2.66E-19 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_0384 2686a0afd59815de5c081ef1dea7ec13 774 Gene3D G3DSA:1.10.1130.10 197 321 1.8E-10 T 13-10-2018 Theam_0384 2686a0afd59815de5c081ef1dea7ec13 774 ProSitePatterns PS00018 EF-hand calcium-binding domain. 159 171 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site Theam_0348 05a91f83e141c61ddc583182b11b69bc 359 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 351 1.3E-158 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Theam_0348 05a91f83e141c61ddc583182b11b69bc 359 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 352 1.0E-135 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Theam_0348 05a91f83e141c61ddc583182b11b69bc 359 SUPERFAMILY SSF53659 3 356 8.45E-126 T 13-10-2018 Theam_0348 05a91f83e141c61ddc583182b11b69bc 359 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 356 50.842 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Theam_0348 05a91f83e141c61ddc583182b11b69bc 359 SMART SM01329 5 352 3.5E-205 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Theam_0348 05a91f83e141c61ddc583182b11b69bc 359 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Theam_0348 05a91f83e141c61ddc583182b11b69bc 359 Gene3D G3DSA:3.40.718.10 2 359 8.0E-147 T 13-10-2018 Theam_1074 3ea781483a16208975d372f2e8b4b570 330 Gene3D G3DSA:3.40.50.2000 1 144 1.9E-33 T 13-10-2018 Theam_1074 3ea781483a16208975d372f2e8b4b570 330 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 328 3.9E-42 T 13-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 Theam_1074 3ea781483a16208975d372f2e8b4b570 330 SUPERFAMILY SSF53756 3 329 2.04E-86 T 13-10-2018 Theam_1074 3ea781483a16208975d372f2e8b4b570 330 Gene3D G3DSA:3.40.50.2000 154 330 5.2E-47 T 13-10-2018 Theam_1074 3ea781483a16208975d372f2e8b4b570 330 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 63 282 1.2E-39 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Theam_1802 3bf801ab9b343528c9518bf9e82884f0 348 Gene3D G3DSA:3.30.700.10 7 94 2.0E-5 T 13-10-2018 Theam_1802 3bf801ab9b343528c9518bf9e82884f0 348 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 5.5E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1802 3bf801ab9b343528c9518bf9e82884f0 348 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1802 3bf801ab9b343528c9518bf9e82884f0 348 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 9.4E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1802 3bf801ab9b343528c9518bf9e82884f0 348 SUPERFAMILY SSF54523 7 106 5.34E-8 T 13-10-2018 Theam_0068 aad64a6ef52dc0483e3f647d74db0f6c 243 Pfam PF01925 Sulfite exporter TauE/SafE 9 237 1.5E-35 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Theam_0223 ffca61da94899634cd4ca648404a178e 156 Pfam PF17209 Hfq protein 99 154 7.9E-14 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Theam_0223 ffca61da94899634cd4ca648404a178e 156 SUPERFAMILY SSF50182 99 154 8.8E-12 T 13-10-2018 IPR010920 LSM domain superfamily Theam_0223 ffca61da94899634cd4ca648404a178e 156 Gene3D G3DSA:2.30.30.100 89 156 1.9E-16 T 13-10-2018 Theam_0223 ffca61da94899634cd4ca648404a178e 156 SUPERFAMILY SSF46785 7 61 4.28E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_1194 21a038ef14fcedbc9c054a62fdfb1975 251 SMART SM00363 1 62 2.8E-12 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_1194 21a038ef14fcedbc9c054a62fdfb1975 251 SUPERFAMILY SSF55174 1 57 1.56E-14 T 13-10-2018 Theam_1194 21a038ef14fcedbc9c054a62fdfb1975 251 Gene3D G3DSA:3.10.290.10 1 57 3.8E-21 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Theam_1194 21a038ef14fcedbc9c054a62fdfb1975 251 Pfam PF00849 RNA pseudouridylate synthase 63 202 2.8E-20 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_1194 21a038ef14fcedbc9c054a62fdfb1975 251 Gene3D G3DSA:3.30.70.1560 131 221 2.5E-50 T 13-10-2018 Theam_1194 21a038ef14fcedbc9c054a62fdfb1975 251 SUPERFAMILY SSF55120 62 240 1.01E-37 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_1194 21a038ef14fcedbc9c054a62fdfb1975 251 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Theam_1194 21a038ef14fcedbc9c054a62fdfb1975 251 Gene3D G3DSA:3.30.70.580 63 238 2.5E-50 T 13-10-2018 Theam_1194 21a038ef14fcedbc9c054a62fdfb1975 251 Pfam PF01479 S4 domain 1 44 1.7E-13 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_1194 21a038ef14fcedbc9c054a62fdfb1975 251 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 67 234 1.3E-42 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Theam_1203 d4ebf7ad4ea7b24d19a6e84a5ed94f5e 343 Gene3D G3DSA:3.30.930.10 11 343 2.1E-130 T 13-10-2018 Theam_1203 d4ebf7ad4ea7b24d19a6e84a5ed94f5e 343 SUPERFAMILY SSF55681 95 341 2.42E-84 T 13-10-2018 Theam_1203 d4ebf7ad4ea7b24d19a6e84a5ed94f5e 343 SUPERFAMILY SSF46589 17 102 4.81E-20 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Theam_1203 d4ebf7ad4ea7b24d19a6e84a5ed94f5e 343 Pfam PF01409 tRNA synthetases class II core domain (F) 95 340 7.1E-109 T 13-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Theam_1203 d4ebf7ad4ea7b24d19a6e84a5ed94f5e 343 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 23 90 4.0E-21 T 13-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Theam_1203 d4ebf7ad4ea7b24d19a6e84a5ed94f5e 343 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 41 340 1.4E-109 T 13-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Theam_1203 d4ebf7ad4ea7b24d19a6e84a5ed94f5e 343 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 11 340 49.674 T 13-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Theam_1306 3e7f8f4902fa9391c9b214dc6bfd7f36 501 Pfam PF01935 Domain of unknown function DUF87 122 333 2.2E-44 T 13-10-2018 IPR002789 Helicase HerA, central domain Theam_1306 3e7f8f4902fa9391c9b214dc6bfd7f36 501 SUPERFAMILY SSF52540 119 468 3.9E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1306 3e7f8f4902fa9391c9b214dc6bfd7f36 501 Pfam PF05872 Bacterial protein of unknown function (DUF853) 355 450 4.7E-5 T 13-10-2018 IPR033186 Helicase HerA-like C-terminal Theam_1306 3e7f8f4902fa9391c9b214dc6bfd7f36 501 Gene3D G3DSA:3.40.50.300 281 479 6.6E-59 T 13-10-2018 Theam_1306 3e7f8f4902fa9391c9b214dc6bfd7f36 501 Gene3D G3DSA:3.40.50.300 107 250 1.4E-24 T 13-10-2018 Theam_1306 3e7f8f4902fa9391c9b214dc6bfd7f36 501 Pfam PF09378 HAS barrel domain 5 71 6.9E-8 T 13-10-2018 IPR018538 Helicase HerA, barrel domain Theam_1268 1da646d066c779c1c30b01f3866f0f4d 214 Gene3D G3DSA:1.10.1670.10 18 209 7.8E-51 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Theam_1268 1da646d066c779c1c30b01f3866f0f4d 214 Gene3D G3DSA:1.10.340.30 23 137 7.8E-51 T 13-10-2018 Theam_1268 1da646d066c779c1c30b01f3866f0f4d 214 SUPERFAMILY SSF48150 8 212 5.34E-46 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Theam_1268 1da646d066c779c1c30b01f3866f0f4d 214 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 193 209 9.0E-6 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Theam_1268 1da646d066c779c1c30b01f3866f0f4d 214 SMART SM00478 38 191 1.1E-22 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Theam_1268 1da646d066c779c1c30b01f3866f0f4d 214 SMART SM00525 192 212 2.1E-5 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Theam_1268 1da646d066c779c1c30b01f3866f0f4d 214 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 171 5.2E-10 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Theam_1268 1da646d066c779c1c30b01f3866f0f4d 214 PIRSF PIRSF001435 1 214 9.6E-49 T 13-10-2018 Theam_0351 720ae8eac2bd52d0697c4014de6d3621 230 Gene3D G3DSA:3.60.15.10 2 230 2.5E-76 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_0351 720ae8eac2bd52d0697c4014de6d3621 230 Pfam PF13483 Beta-lactamase superfamily domain 4 194 7.7E-24 T 13-10-2018 Theam_0351 720ae8eac2bd52d0697c4014de6d3621 230 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 2 230 37.562 T 13-10-2018 IPR022877 Protein of unknown funcion UPF0173 Theam_0351 720ae8eac2bd52d0697c4014de6d3621 230 SMART SM00849 8 194 2.4E-8 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_0351 720ae8eac2bd52d0697c4014de6d3621 230 SUPERFAMILY SSF56281 3 227 1.22E-38 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_0505 5312b024ce45b4ef022432ed823500dd 240 SUPERFAMILY SSF69618 16 238 1.96E-46 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Theam_0505 5312b024ce45b4ef022432ed823500dd 240 Gene3D G3DSA:3.40.50.10090 146 238 2.8E-16 T 13-10-2018 Theam_0505 5312b024ce45b4ef022432ed823500dd 240 Pfam PF02602 Uroporphyrinogen-III synthase HemD 17 231 5.6E-46 T 13-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Theam_0505 5312b024ce45b4ef022432ed823500dd 240 Gene3D G3DSA:3.40.50.10090 46 145 2.4E-21 T 13-10-2018 Theam_1726 145896ed95b781b33822ea62a2c69ac3 471 Gene3D G3DSA:3.90.550.10 2 225 5.4E-68 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_1726 145896ed95b781b33822ea62a2c69ac3 471 Gene3D G3DSA:2.160.10.10 226 453 3.0E-60 T 13-10-2018 Theam_1726 145896ed95b781b33822ea62a2c69ac3 471 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 393 427 4.5E-7 T 13-10-2018 IPR001451 Hexapeptide repeat Theam_1726 145896ed95b781b33822ea62a2c69ac3 471 Pfam PF00483 Nucleotidyl transferase 4 203 3.3E-20 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Theam_1726 145896ed95b781b33822ea62a2c69ac3 471 SUPERFAMILY SSF51161 252 437 3.11E-45 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Theam_1726 145896ed95b781b33822ea62a2c69ac3 471 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 450 38.74 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Theam_1726 145896ed95b781b33822ea62a2c69ac3 471 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 449 7.4E-172 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Theam_1726 145896ed95b781b33822ea62a2c69ac3 471 SUPERFAMILY SSF53448 3 250 4.59E-66 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0822 da8969b3e50f5f07551e44819f0b407e 227 Gene3D G3DSA:3.30.930.10 1 176 1.4E-47 T 13-10-2018 Theam_0822 da8969b3e50f5f07551e44819f0b407e 227 SUPERFAMILY SSF55681 2 170 1.99E-44 T 13-10-2018 Theam_0822 da8969b3e50f5f07551e44819f0b407e 227 Pfam PF03099 Biotin/lipoate A/B protein ligase family 10 119 4.7E-17 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Theam_0822 da8969b3e50f5f07551e44819f0b407e 227 SUPERFAMILY SSF50037 180 225 2.66E-8 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal Theam_0822 da8969b3e50f5f07551e44819f0b407e 227 Pfam PF02237 Biotin protein ligase C terminal domain 180 225 3.5E-7 T 13-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Theam_0822 da8969b3e50f5f07551e44819f0b407e 227 Gene3D G3DSA:2.30.30.100 179 227 5.5E-13 T 13-10-2018 Theam_0822 da8969b3e50f5f07551e44819f0b407e 227 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 2 224 2.2E-46 T 13-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Theam_1049 c3dd8ac857e0eeb2f626107462d3a82c 113 SUPERFAMILY SSF54197 2 109 4.18E-40 T 13-10-2018 IPR036265 HIT-like superfamily Theam_1049 c3dd8ac857e0eeb2f626107462d3a82c 113 Pfam PF01230 HIT domain 10 105 7.0E-31 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Theam_1049 c3dd8ac857e0eeb2f626107462d3a82c 113 Gene3D G3DSA:3.30.428.10 1 108 8.5E-43 T 13-10-2018 IPR036265 HIT-like superfamily Theam_1049 c3dd8ac857e0eeb2f626107462d3a82c 113 ProSitePatterns PS00892 HIT domain signature. 85 103 - T 13-10-2018 IPR019808 Histidine triad, conserved site Theam_1049 c3dd8ac857e0eeb2f626107462d3a82c 113 PRINTS PR00332 Histidine triad family signature 3 19 9.0E-22 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Theam_1049 c3dd8ac857e0eeb2f626107462d3a82c 113 PRINTS PR00332 Histidine triad family signature 24 42 9.0E-22 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Theam_1049 c3dd8ac857e0eeb2f626107462d3a82c 113 PRINTS PR00332 Histidine triad family signature 92 102 9.0E-22 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Theam_0160 58c821ac8b8df7ecef5b89a4591dd0e7 817 Gene3D G3DSA:2.40.50.140 163 265 5.3E-16 T 13-10-2018 Theam_0160 58c821ac8b8df7ecef5b89a4591dd0e7 817 Pfam PF00271 Helicase conserved C-terminal domain 593 706 4.4E-20 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_0160 58c821ac8b8df7ecef5b89a4591dd0e7 817 SMART SM00487 388 578 2.4E-38 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Theam_0160 58c821ac8b8df7ecef5b89a4591dd0e7 817 Gene3D G3DSA:3.40.50.300 335 569 8.6E-95 T 13-10-2018 Theam_0160 58c821ac8b8df7ecef5b89a4591dd0e7 817 Pfam PF00270 DEAD/DEAH box helicase 395 553 2.7E-20 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Theam_0160 58c821ac8b8df7ecef5b89a4591dd0e7 817 SMART SM00490 623 707 3.3E-24 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_0160 58c821ac8b8df7ecef5b89a4591dd0e7 817 SMART SM00490 458 526 0.16 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_0160 58c821ac8b8df7ecef5b89a4591dd0e7 817 SUPERFAMILY SSF52540 511 717 1.34E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0160 58c821ac8b8df7ecef5b89a4591dd0e7 817 Gene3D G3DSA:3.40.50.300 576 748 1.6E-57 T 13-10-2018 Theam_0160 58c821ac8b8df7ecef5b89a4591dd0e7 817 SUPERFAMILY SSF50249 125 299 1.88E-33 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0160 58c821ac8b8df7ecef5b89a4591dd0e7 817 SUPERFAMILY SSF52540 303 571 8.43E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0160 58c821ac8b8df7ecef5b89a4591dd0e7 817 Pfam PF17191 RecG wedge domain 128 291 5.4E-23 T 13-10-2018 IPR033454 RecG, wedge domain Theam_0160 58c821ac8b8df7ecef5b89a4591dd0e7 817 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 144 783 3.3E-236 T 13-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Theam_0390 dfea4910128612d5de14141c697fc6ec 121 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 115 4.7E-13 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Theam_0390 dfea4910128612d5de14141c697fc6ec 121 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 79 3.0E-8 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Theam_0390 dfea4910128612d5de14141c697fc6ec 121 Gene3D G3DSA:3.90.470.20 1 116 2.3E-18 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Theam_0390 dfea4910128612d5de14141c697fc6ec 121 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 79 8.9E-12 T 13-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Theam_0390 dfea4910128612d5de14141c697fc6ec 121 SUPERFAMILY SSF56214 3 113 2.09E-15 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Theam_0526 35b4f6023ae9f2cc1dc7f80418b74fe8 396 Gene3D G3DSA:3.40.640.10 54 298 5.7E-147 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Theam_0526 35b4f6023ae9f2cc1dc7f80418b74fe8 396 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 216 253 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Theam_0526 35b4f6023ae9f2cc1dc7f80418b74fe8 396 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 10 393 72.733 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Theam_0526 35b4f6023ae9f2cc1dc7f80418b74fe8 396 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 10 390 2.8E-155 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Theam_0526 35b4f6023ae9f2cc1dc7f80418b74fe8 396 Gene3D G3DSA:3.90.1150.10 19 383 5.7E-147 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Theam_0526 35b4f6023ae9f2cc1dc7f80418b74fe8 396 PIRSF PIRSF000521 2 157 8.0E-11 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Theam_0526 35b4f6023ae9f2cc1dc7f80418b74fe8 396 PIRSF PIRSF000521 149 393 1.2E-43 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Theam_0526 35b4f6023ae9f2cc1dc7f80418b74fe8 396 SUPERFAMILY SSF53383 11 390 6.74E-132 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Theam_0526 35b4f6023ae9f2cc1dc7f80418b74fe8 396 Pfam PF00202 Aminotransferase class-III 16 389 1.3E-116 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Theam_1506 f2308a2ffb816caa5f9ef0969dcf1057 68 SMART SM00357 5 68 5.2E-24 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Theam_1506 f2308a2ffb816caa5f9ef0969dcf1057 68 Pfam PF00313 'Cold-shock' DNA-binding domain 5 66 3.3E-27 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Theam_1506 f2308a2ffb816caa5f9ef0969dcf1057 68 PRINTS PR00050 Cold shock protein signature 26 35 1.9E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Theam_1506 f2308a2ffb816caa5f9ef0969dcf1057 68 PRINTS PR00050 Cold shock protein signature 6 21 1.9E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Theam_1506 f2308a2ffb816caa5f9ef0969dcf1057 68 PRINTS PR00050 Cold shock protein signature 41 59 1.9E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Theam_1506 f2308a2ffb816caa5f9ef0969dcf1057 68 PIRSF PIRSF002599 1 68 4.4E-23 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 Theam_1506 f2308a2ffb816caa5f9ef0969dcf1057 68 SUPERFAMILY SSF50249 3 65 1.71E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_1506 f2308a2ffb816caa5f9ef0969dcf1057 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 35 - T 13-10-2018 IPR019844 Cold-shock conserved site Theam_1506 f2308a2ffb816caa5f9ef0969dcf1057 68 Gene3D G3DSA:2.40.50.140 3 66 1.0E-28 T 13-10-2018 Theam_0481 4fcdbb757358f1da5ebea3593e5ae748 280 Pfam PF00146 NADH dehydrogenase 6 275 7.3E-45 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1247 8bf72da93d5e7411406fd058481588e0 526 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 508 1.4E-172 T 13-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Theam_1247 8bf72da93d5e7411406fd058481588e0 526 Pfam PF09334 tRNA synthetases class I (M) 146 360 2.6E-68 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1247 8bf72da93d5e7411406fd058481588e0 526 Gene3D G3DSA:3.40.50.620 5 332 2.2E-164 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1247 8bf72da93d5e7411406fd058481588e0 526 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 3 133 1.8E-12 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1247 8bf72da93d5e7411406fd058481588e0 526 PRINTS PR01041 Methionyl-tRNA synthetase signature 255 270 6.3E-37 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Theam_1247 8bf72da93d5e7411406fd058481588e0 526 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 6.3E-37 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Theam_1247 8bf72da93d5e7411406fd058481588e0 526 PRINTS PR01041 Methionyl-tRNA synthetase signature 347 358 6.3E-37 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Theam_1247 8bf72da93d5e7411406fd058481588e0 526 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 6.3E-37 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Theam_1247 8bf72da93d5e7411406fd058481588e0 526 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 6.3E-37 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Theam_1247 8bf72da93d5e7411406fd058481588e0 526 PRINTS PR01041 Methionyl-tRNA synthetase signature 223 234 6.3E-37 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Theam_1247 8bf72da93d5e7411406fd058481588e0 526 Gene3D G3DSA:1.10.730.10 336 512 9.7E-48 T 13-10-2018 Theam_1247 8bf72da93d5e7411406fd058481588e0 526 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 508 50.39 T 13-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Theam_1247 8bf72da93d5e7411406fd058481588e0 526 Gene3D G3DSA:2.170.220.10 116 225 2.2E-164 T 13-10-2018 Theam_1247 8bf72da93d5e7411406fd058481588e0 526 Pfam PF08264 Anticodon-binding domain of tRNA 382 476 4.1E-7 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Theam_1247 8bf72da93d5e7411406fd058481588e0 526 SUPERFAMILY SSF47323 348 509 3.92E-38 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1247 8bf72da93d5e7411406fd058481588e0 526 SUPERFAMILY SSF52374 3 345 1.64E-123 T 13-10-2018 Theam_0574 5649a38e9b2bdd169075abe821b1ff7f 277 Pfam PF13469 Sulfotransferase family 4 230 1.0E-16 T 13-10-2018 Theam_0574 5649a38e9b2bdd169075abe821b1ff7f 277 SUPERFAMILY SSF52540 4 241 7.97E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0574 5649a38e9b2bdd169075abe821b1ff7f 277 Gene3D G3DSA:3.40.50.300 2 260 5.6E-29 T 13-10-2018 Theam_0575 8f1cf6dbe00c628052e6d762301c7c37 970 Gene3D G3DSA:3.90.550.10 295 543 1.9E-42 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0575 8f1cf6dbe00c628052e6d762301c7c37 970 Gene3D G3DSA:3.90.550.10 609 830 3.1E-21 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0575 8f1cf6dbe00c628052e6d762301c7c37 970 SUPERFAMILY SSF53448 3 230 4.29E-39 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0575 8f1cf6dbe00c628052e6d762301c7c37 970 Gene3D G3DSA:3.90.550.10 1 249 7.4E-34 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0575 8f1cf6dbe00c628052e6d762301c7c37 970 SUPERFAMILY SSF53448 303 538 3.64E-44 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0575 8f1cf6dbe00c628052e6d762301c7c37 970 SUPERFAMILY SSF53448 614 857 6.22E-31 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0575 8f1cf6dbe00c628052e6d762301c7c37 970 Pfam PF00535 Glycosyl transferase family 2 311 475 3.1E-24 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Theam_0575 8f1cf6dbe00c628052e6d762301c7c37 970 Pfam PF00535 Glycosyl transferase family 2 619 785 4.9E-8 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Theam_0575 8f1cf6dbe00c628052e6d762301c7c37 970 Pfam PF00535 Glycosyl transferase family 2 5 116 2.6E-22 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Theam_0354 c83cc44b4c38c86ed3f05a2acc4331a4 350 SUPERFAMILY SSF54106 84 129 2.09E-12 T 13-10-2018 Theam_0354 c83cc44b4c38c86ed3f05a2acc4331a4 350 SUPERFAMILY SSF54106 21 66 9.55E-13 T 13-10-2018 Theam_0354 c83cc44b4c38c86ed3f05a2acc4331a4 350 SUPERFAMILY SSF51261 172 349 1.57E-28 T 13-10-2018 IPR011055 Duplicated hybrid motif Theam_0354 c83cc44b4c38c86ed3f05a2acc4331a4 350 Pfam PF01551 Peptidase family M23 245 334 2.6E-21 T 13-10-2018 IPR016047 Peptidase M23 Theam_0354 c83cc44b4c38c86ed3f05a2acc4331a4 350 Gene3D G3DSA:3.10.350.10 20 71 2.2E-19 T 13-10-2018 IPR036779 LysM domain superfamily Theam_0354 c83cc44b4c38c86ed3f05a2acc4331a4 350 Gene3D G3DSA:3.10.350.10 162 217 5.1E-12 T 13-10-2018 IPR036779 LysM domain superfamily Theam_0354 c83cc44b4c38c86ed3f05a2acc4331a4 350 Gene3D G3DSA:3.10.350.10 72 144 3.3E-18 T 13-10-2018 IPR036779 LysM domain superfamily Theam_0354 c83cc44b4c38c86ed3f05a2acc4331a4 350 Gene3D G3DSA:2.70.70.10 220 349 2.1E-23 T 13-10-2018 IPR011055 Duplicated hybrid motif Theam_0354 c83cc44b4c38c86ed3f05a2acc4331a4 350 Pfam PF01476 LysM domain 169 211 1.7E-10 T 13-10-2018 IPR018392 LysM domain Theam_0354 c83cc44b4c38c86ed3f05a2acc4331a4 350 Pfam PF01476 LysM domain 23 65 1.9E-15 T 13-10-2018 IPR018392 LysM domain Theam_0354 c83cc44b4c38c86ed3f05a2acc4331a4 350 Pfam PF01476 LysM domain 86 128 1.6E-15 T 13-10-2018 IPR018392 LysM domain Theam_0354 c83cc44b4c38c86ed3f05a2acc4331a4 350 SMART SM00257 168 212 9.4E-9 T 13-10-2018 IPR018392 LysM domain Theam_0354 c83cc44b4c38c86ed3f05a2acc4331a4 350 SMART SM00257 22 65 3.9E-17 T 13-10-2018 IPR018392 LysM domain Theam_0354 c83cc44b4c38c86ed3f05a2acc4331a4 350 SMART SM00257 85 128 7.2E-17 T 13-10-2018 IPR018392 LysM domain Theam_0645 c19cb36d565aac39b278b0ba6b36fa0e 528 Gene3D G3DSA:3.40.720.10 5 519 1.5E-223 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Theam_0645 c19cb36d565aac39b278b0ba6b36fa0e 528 PIRSF PIRSF001492 1 525 9.8E-207 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0645 c19cb36d565aac39b278b0ba6b36fa0e 528 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 521 1.3E-214 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0645 c19cb36d565aac39b278b0ba6b36fa0e 528 SUPERFAMILY SSF64158 76 303 3.4E-84 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0645 c19cb36d565aac39b278b0ba6b36fa0e 528 SUPERFAMILY SSF53649 5 523 6.11E-72 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Theam_0645 c19cb36d565aac39b278b0ba6b36fa0e 528 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 3 524 49.759 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0645 c19cb36d565aac39b278b0ba6b36fa0e 528 Pfam PF01676 Metalloenzyme superfamily 5 507 5.1E-79 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Theam_0645 c19cb36d565aac39b278b0ba6b36fa0e 528 Gene3D G3DSA:3.40.1450.10 76 305 1.5E-223 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0645 c19cb36d565aac39b278b0ba6b36fa0e 528 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 81 293 1.7E-79 T 13-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Theam_0699 f53c775fdc367e6102311bbe11da5215 230 ProDom PD023377 UPF0128 PYRAB08320 PH1314 PF1488 MJ1463 AQ_756 16 227 2.0E-74 T 13-10-2018 IPR005266 Uncharacterised protein family UPF0128 Theam_0699 f53c775fdc367e6102311bbe11da5215 230 Hamap MF_00264 UPF0128 protein . 1 230 104.297 T 13-10-2018 IPR005266 Uncharacterised protein family UPF0128 Theam_0699 f53c775fdc367e6102311bbe11da5215 230 PIRSF PIRSF016179 2 230 2.1E-103 T 13-10-2018 IPR005266 Uncharacterised protein family UPF0128 Theam_0699 f53c775fdc367e6102311bbe11da5215 230 TIGRFAM TIGR00703 TIGR00703: TIGR00703 family protein 10 230 1.1E-101 T 13-10-2018 IPR005266 Uncharacterised protein family UPF0128 Theam_0699 f53c775fdc367e6102311bbe11da5215 230 Pfam PF03673 Uncharacterised protein family (UPF0128) 13 230 5.8E-103 T 13-10-2018 IPR005266 Uncharacterised protein family UPF0128 Theam_0609 400618ecb387b7102bdeb44f3e19ce53 841 SUPERFAMILY SSF51717 319 575 1.03E-77 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Theam_0609 400618ecb387b7102bdeb44f3e19ce53 841 Gene3D G3DSA:3.20.20.330 7 299 6.1E-109 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Theam_0609 400618ecb387b7102bdeb44f3e19ce53 841 SMART SM01018 631 713 2.1E-25 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Theam_0609 400618ecb387b7102bdeb44f3e19ce53 841 Pfam PF02310 B12 binding domain 721 822 2.7E-28 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Theam_0609 400618ecb387b7102bdeb44f3e19ce53 841 Gene3D G3DSA:1.10.1240.10 616 713 5.6E-20 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Theam_0609 400618ecb387b7102bdeb44f3e19ce53 841 SUPERFAMILY SSF52242 699 838 3.66E-41 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Theam_0609 400618ecb387b7102bdeb44f3e19ce53 841 Pfam PF02574 Homocysteine S-methyltransferase 14 286 2.0E-71 T 13-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 Theam_0609 400618ecb387b7102bdeb44f3e19ce53 841 Gene3D G3DSA:3.20.20.20 315 582 4.0E-91 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Theam_0609 400618ecb387b7102bdeb44f3e19ce53 841 SUPERFAMILY SSF82282 9 360 1.05E-116 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Theam_0609 400618ecb387b7102bdeb44f3e19ce53 841 Pfam PF00809 Pterin binding enzyme 321 544 1.4E-32 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Theam_0609 400618ecb387b7102bdeb44f3e19ce53 841 PIRSF PIRSF037472 5 840 0.0 T 13-10-2018 IPR017215 5-methyltetrahydrofolate-homocysteine S-methyltransferase, bacterial Theam_0609 400618ecb387b7102bdeb44f3e19ce53 841 Gene3D G3DSA:3.40.50.280 719 841 1.5E-46 T 13-10-2018 Theam_0609 400618ecb387b7102bdeb44f3e19ce53 841 Pfam PF02607 B12 binding domain 637 706 1.7E-16 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Theam_0609 400618ecb387b7102bdeb44f3e19ce53 841 SUPERFAMILY SSF47644 634 712 1.09E-16 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Theam_0159 6bd03b27eaf894042025248e497be3c6 301 Pfam PF01180 Dihydroorotate dehydrogenase 1 284 5.7E-78 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Theam_0159 6bd03b27eaf894042025248e497be3c6 301 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 237 257 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Theam_0159 6bd03b27eaf894042025248e497be3c6 301 SUPERFAMILY SSF51395 2 299 4.76E-91 T 13-10-2018 Theam_0159 6bd03b27eaf894042025248e497be3c6 301 Gene3D G3DSA:2.30.26.10 53 214 2.3E-102 T 13-10-2018 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 Theam_0159 6bd03b27eaf894042025248e497be3c6 301 PIRSF PIRSF000164 1 301 4.4E-87 T 13-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Theam_0159 6bd03b27eaf894042025248e497be3c6 301 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 38 57 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Theam_0159 6bd03b27eaf894042025248e497be3c6 301 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 2 297 4.6E-125 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Theam_0159 6bd03b27eaf894042025248e497be3c6 301 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 2 299 42.359 T 13-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 Theam_0159 6bd03b27eaf894042025248e497be3c6 301 Gene3D G3DSA:3.20.20.70 10 290 2.3E-102 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0423 5df7ef2a321eef7a3ec8b205f65f9f84 882 Pfam PF01568 Molydopterin dinucleotide binding domain 735 845 5.1E-25 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Theam_0423 5df7ef2a321eef7a3ec8b205f65f9f84 882 Gene3D G3DSA:2.40.40.20 725 851 3.4E-45 T 13-10-2018 Theam_0423 5df7ef2a321eef7a3ec8b205f65f9f84 882 Pfam PF00384 Molybdopterin oxidoreductase 120 587 5.4E-69 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0423 5df7ef2a321eef7a3ec8b205f65f9f84 882 Gene3D G3DSA:2.20.25.90 60 118 1.0E-14 T 13-10-2018 Theam_0423 5df7ef2a321eef7a3ec8b205f65f9f84 882 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 23 8.6E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Theam_0423 5df7ef2a321eef7a3ec8b205f65f9f84 882 Gene3D G3DSA:3.40.50.740 126 666 1.7E-164 T 13-10-2018 Theam_0423 5df7ef2a321eef7a3ec8b205f65f9f84 882 SUPERFAMILY SSF50692 712 851 2.1E-38 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Theam_0423 5df7ef2a321eef7a3ec8b205f65f9f84 882 Gene3D G3DSA:3.40.228.10 204 425 1.7E-164 T 13-10-2018 Theam_0423 5df7ef2a321eef7a3ec8b205f65f9f84 882 PIRSF PIRSF036643 705 870 2.9E-25 T 13-10-2018 Theam_0423 5df7ef2a321eef7a3ec8b205f65f9f84 882 PIRSF PIRSF036643 13 601 1.1E-102 T 13-10-2018 Theam_0423 5df7ef2a321eef7a3ec8b205f65f9f84 882 SUPERFAMILY SSF53706 61 629 5.23E-168 T 13-10-2018 Theam_0423 5df7ef2a321eef7a3ec8b205f65f9f84 882 SMART SM00926 63 117 2.7E-8 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0423 5df7ef2a321eef7a3ec8b205f65f9f84 882 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 64 113 1.9E-9 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0683 ad5be2249ccdadcf67419924a15255b9 655 Gene3D G3DSA:3.30.70.270 249 400 5.0E-7 T 13-10-2018 Theam_0683 ad5be2249ccdadcf67419924a15255b9 655 Gene3D G3DSA:3.20.20.450 417 654 1.1E-52 T 13-10-2018 IPR035919 EAL domain superfamily Theam_0683 ad5be2249ccdadcf67419924a15255b9 655 SUPERFAMILY SSF141868 428 652 6.8E-50 T 13-10-2018 IPR035919 EAL domain superfamily Theam_0683 ad5be2249ccdadcf67419924a15255b9 655 SMART SM00052 409 655 5.5E-36 T 13-10-2018 IPR001633 EAL domain Theam_0683 ad5be2249ccdadcf67419924a15255b9 655 Pfam PF00563 EAL domain 428 651 4.2E-47 T 13-10-2018 IPR001633 EAL domain Theam_0683 ad5be2249ccdadcf67419924a15255b9 655 SUPERFAMILY SSF55073 257 350 2.43E-5 T 13-10-2018 IPR029787 Nucleotide cyclase Theam_1546 3ad8dbd1ac7bcae95e794204541818f4 242 Gene3D G3DSA:3.30.420.10 1 223 1.3E-71 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Theam_1546 3ad8dbd1ac7bcae95e794204541818f4 242 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 199 33.155 T 13-10-2018 IPR022898 Ribonuclease HII GO:0004523 Theam_1546 3ad8dbd1ac7bcae95e794204541818f4 242 SUPERFAMILY SSF53098 10 204 8.95E-63 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Theam_1546 3ad8dbd1ac7bcae95e794204541818f4 242 Pfam PF01351 Ribonuclease HII 22 196 6.5E-32 T 13-10-2018 IPR024567 Ribonuclease HII/HIII domain Theam_0490 9f3b928b9f579c6b9547f31c193e551d 240 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 204 8.6E-23 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Theam_0490 9f3b928b9f579c6b9547f31c193e551d 240 SUPERFAMILY SSF56300 2 239 3.8E-53 T 13-10-2018 Theam_0490 9f3b928b9f579c6b9547f31c193e551d 240 Gene3D G3DSA:3.60.21.10 1 240 3.1E-63 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Theam_0490 9f3b928b9f579c6b9547f31c193e551d 240 PIRSF PIRSF000883 1 240 1.6E-57 T 13-10-2018 IPR011152 Phosphoesterase MJ0912 Theam_1659 6130722776af34d5cadf522cda76de7d 502 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 501 51.861 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1659 6130722776af34d5cadf522cda76de7d 502 SUPERFAMILY SSF47917 372 500 4.71E-49 T 13-10-2018 Theam_1659 6130722776af34d5cadf522cda76de7d 502 Gene3D G3DSA:2.40.30.20 1 93 1.1E-32 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_1659 6130722776af34d5cadf522cda76de7d 502 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 501 1.8E-259 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1659 6130722776af34d5cadf522cda76de7d 502 Gene3D G3DSA:1.20.150.20 372 502 1.5E-52 T 13-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1659 6130722776af34d5cadf522cda76de7d 502 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 496 1.6E-51 T 13-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1659 6130722776af34d5cadf522cda76de7d 502 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 2.2E-13 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_1659 6130722776af34d5cadf522cda76de7d 502 Gene3D G3DSA:3.40.50.300 94 371 3.8E-128 T 13-10-2018 Theam_1659 6130722776af34d5cadf522cda76de7d 502 PIRSF PIRSF039088 1 502 1.2E-257 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1659 6130722776af34d5cadf522cda76de7d 502 SUPERFAMILY SSF50615 10 94 6.02E-27 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_1659 6130722776af34d5cadf522cda76de7d 502 SUPERFAMILY SSF52540 96 370 3.48E-102 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1659 6130722776af34d5cadf522cda76de7d 502 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_1659 6130722776af34d5cadf522cda76de7d 502 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 1.8E-75 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_0009 1895f944251c1e76c176c1769844ba70 192 SMART SM01207 7 184 4.1E-85 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Theam_0009 1895f944251c1e76c176c1769844ba70 192 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 191 1.3E-57 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Theam_0009 1895f944251c1e76c176c1769844ba70 192 Pfam PF02660 Glycerol-3-phosphate acyltransferase 8 183 6.7E-55 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Theam_0009 1895f944251c1e76c176c1769844ba70 192 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 4 192 20.969 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Theam_0730 305e0c7d29a104a0111b21cf83f825e0 192 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 14 175 4.0E-57 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Theam_0730 305e0c7d29a104a0111b21cf83f825e0 192 SUPERFAMILY SSF117457 6 174 4.71E-66 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Theam_0730 305e0c7d29a104a0111b21cf83f825e0 192 Pfam PF05683 Fumarase C-terminus 4 175 1.4E-62 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Theam_0730 305e0c7d29a104a0111b21cf83f825e0 192 Gene3D G3DSA:3.20.130.10 1 175 1.1E-73 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Theam_0828 c7bcb7313e803ecc793097d6e34a2d70 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 227 380 4.1E-29 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Theam_0828 c7bcb7313e803ecc793097d6e34a2d70 469 Gene3D G3DSA:3.40.50.300 228 396 6.6E-112 T 13-10-2018 Theam_0828 c7bcb7313e803ecc793097d6e34a2d70 469 SUPERFAMILY SSF52540 85 382 3.82E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0828 c7bcb7313e803ecc793097d6e34a2d70 469 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 17 469 8.5E-131 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Theam_0828 c7bcb7313e803ecc793097d6e34a2d70 469 Gene3D G3DSA:3.30.1360.120 2 131 4.7E-47 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Theam_0828 c7bcb7313e803ecc793097d6e34a2d70 469 Pfam PF10396 GTP-binding protein TrmE N-terminus 11 131 5.2E-40 T 13-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 Theam_0828 c7bcb7313e803ecc793097d6e34a2d70 469 Pfam PF12631 MnmE helical domain 134 466 2.9E-57 T 13-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 Theam_0828 c7bcb7313e803ecc793097d6e34a2d70 469 Gene3D G3DSA:1.20.120.430 132 469 6.6E-112 T 13-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 Theam_0828 c7bcb7313e803ecc793097d6e34a2d70 469 Pfam PF01926 50S ribosome-binding GTPase 229 343 1.9E-28 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_0828 c7bcb7313e803ecc793097d6e34a2d70 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 297 315 1.0E-7 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_0828 c7bcb7313e803ecc793097d6e34a2d70 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 230 250 1.0E-7 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_0828 c7bcb7313e803ecc793097d6e34a2d70 469 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 469 35.528 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Theam_0142 0771b2d94656aa50050bfcb326cabe19 84 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 83 8.0E-15 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0142 0771b2d94656aa50050bfcb326cabe19 84 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 13-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0142 0771b2d94656aa50050bfcb326cabe19 84 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 80 4.0E-41 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0142 0771b2d94656aa50050bfcb326cabe19 84 Gene3D G3DSA:2.40.50.100 20 84 8.8E-31 T 13-10-2018 Theam_0142 0771b2d94656aa50050bfcb326cabe19 84 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.5E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0142 0771b2d94656aa50050bfcb326cabe19 84 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.5E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0142 0771b2d94656aa50050bfcb326cabe19 84 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.5E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0142 0771b2d94656aa50050bfcb326cabe19 84 SUPERFAMILY SSF110324 2 81 1.57E-34 T 13-10-2018 Theam_0142 0771b2d94656aa50050bfcb326cabe19 84 Pfam PF01016 Ribosomal L27 protein 2 80 6.4E-40 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0142 0771b2d94656aa50050bfcb326cabe19 84 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 28.877 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0245 d9ff58f88fe8af73956906920d89d556 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.688 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0245 d9ff58f88fe8af73956906920d89d556 89 Pfam PF00312 Ribosomal protein S15 9 88 3.5E-36 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0245 d9ff58f88fe8af73956906920d89d556 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0245 d9ff58f88fe8af73956906920d89d556 89 SUPERFAMILY SSF47060 5 89 1.85E-33 T 13-10-2018 IPR009068 S15/NS1, RNA-binding Theam_0245 d9ff58f88fe8af73956906920d89d556 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.6E-36 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0245 d9ff58f88fe8af73956906920d89d556 89 SMART SM01387 8 88 6.1E-47 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0245 d9ff58f88fe8af73956906920d89d556 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 3.0E-16 T 13-10-2018 Theam_0245 d9ff58f88fe8af73956906920d89d556 89 Gene3D G3DSA:1.10.287.10 2 89 5.7E-35 T 13-10-2018 Theam_0805 8ca363de579f53e74cb3dc544b0bdeed 413 Gene3D G3DSA:3.30.450.40 141 288 3.9E-26 T 13-10-2018 IPR029016 GAF-like domain superfamily Theam_0805 8ca363de579f53e74cb3dc544b0bdeed 413 Pfam PF16963 PelD GGDEF domain 300 389 4.2E-7 T 13-10-2018 IPR031583 PelD, GGDEF domain Theam_0843 46f7e81f5362d6fd57c71bb17a017ee1 133 SMART SM00448 8 124 6.4E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_0843 46f7e81f5362d6fd57c71bb17a017ee1 133 Gene3D G3DSA:3.40.50.2300 3 131 1.0E-43 T 13-10-2018 Theam_0843 46f7e81f5362d6fd57c71bb17a017ee1 133 SUPERFAMILY SSF52172 7 129 1.71E-39 T 13-10-2018 IPR011006 CheY-like superfamily Theam_0843 46f7e81f5362d6fd57c71bb17a017ee1 133 Pfam PF00072 Response regulator receiver domain 10 124 2.1E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_0075 69141fbae642bc4464382b0be39dabbf 252 Gene3D G3DSA:3.20.20.70 1 252 3.5E-115 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0075 69141fbae642bc4464382b0be39dabbf 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 51.392 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Theam_0075 69141fbae642bc4464382b0be39dabbf 252 Pfam PF00977 Histidine biosynthesis protein 5 234 2.6E-94 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Theam_0075 69141fbae642bc4464382b0be39dabbf 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 1.8E-123 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Theam_0075 69141fbae642bc4464382b0be39dabbf 252 SUPERFAMILY SSF51366 1 251 1.02E-88 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Theam_0011 cea2744a1cdd6753ce4b7871c6c1d575 617 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 3 277 4.8E-119 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Theam_0011 cea2744a1cdd6753ce4b7871c6c1d575 617 Gene3D G3DSA:3.40.50.920 484 615 7.8E-41 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Theam_0011 cea2744a1cdd6753ce4b7871c6c1d575 617 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 5 612 3.3E-248 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Theam_0011 cea2744a1cdd6753ce4b7871c6c1d575 617 Gene3D G3DSA:3.40.50.970 307 479 3.2E-70 T 13-10-2018 Theam_0011 cea2744a1cdd6753ce4b7871c6c1d575 617 SMART SM00861 308 472 3.9E-75 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Theam_0011 cea2744a1cdd6753ce4b7871c6c1d575 617 ProSitePatterns PS00802 Transketolase signature 2. 414 430 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Theam_0011 cea2744a1cdd6753ce4b7871c6c1d575 617 Pfam PF02780 Transketolase, C-terminal domain 484 604 1.5E-33 T 13-10-2018 IPR033248 Transketolase, C-terminal domain Theam_0011 cea2744a1cdd6753ce4b7871c6c1d575 617 SUPERFAMILY SSF52518 305 494 5.89E-63 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Theam_0011 cea2744a1cdd6753ce4b7871c6c1d575 617 SUPERFAMILY SSF52518 3 370 3.54E-79 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Theam_0011 cea2744a1cdd6753ce4b7871c6c1d575 617 Pfam PF02779 Transketolase, pyrimidine binding domain 307 467 1.1E-43 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Theam_0011 cea2744a1cdd6753ce4b7871c6c1d575 617 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 613 45.435 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Theam_0011 cea2744a1cdd6753ce4b7871c6c1d575 617 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Theam_0011 cea2744a1cdd6753ce4b7871c6c1d575 617 SUPERFAMILY SSF52922 481 613 1.7E-36 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Theam_0557 d7649387f381be795dea36a67b20498f 381 Pfam PF02080 TrkA-C domain 289 357 3.9E-17 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Theam_0557 d7649387f381be795dea36a67b20498f 381 Gene3D G3DSA:3.30.70.1450 286 366 5.8E-23 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Theam_0557 d7649387f381be795dea36a67b20498f 381 Pfam PF02254 TrkA-N domain 130 248 3.0E-16 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Theam_0557 d7649387f381be795dea36a67b20498f 381 Pfam PF07885 Ion channel 32 105 3.8E-7 T 13-10-2018 IPR013099 Potassium channel domain Theam_0557 d7649387f381be795dea36a67b20498f 381 SUPERFAMILY SSF116726 286 358 2.49E-19 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Theam_0557 d7649387f381be795dea36a67b20498f 381 Gene3D G3DSA:3.40.50.720 129 273 8.6E-22 T 13-10-2018 Theam_0557 d7649387f381be795dea36a67b20498f 381 SUPERFAMILY SSF81324 23 151 6.15E-14 T 13-10-2018 Theam_0557 d7649387f381be795dea36a67b20498f 381 Gene3D G3DSA:1.10.287.70 16 128 8.5E-15 T 13-10-2018 Theam_0557 d7649387f381be795dea36a67b20498f 381 SUPERFAMILY SSF51735 126 272 1.97E-18 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0829 89e98358494941c388f99eb1051b1c5d 299 Gene3D G3DSA:2.70.70.10 154 291 4.1E-49 T 13-10-2018 IPR011055 Duplicated hybrid motif Theam_0829 89e98358494941c388f99eb1051b1c5d 299 Pfam PF01551 Peptidase family M23 190 284 1.4E-31 T 13-10-2018 IPR016047 Peptidase M23 Theam_0829 89e98358494941c388f99eb1051b1c5d 299 SUPERFAMILY SSF51261 164 288 9.42E-54 T 13-10-2018 IPR011055 Duplicated hybrid motif Theam_1219 32215bf6c36defc170b72b58978d5e88 418 Gene3D G3DSA:3.40.640.10 33 283 9.3E-196 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Theam_1219 32215bf6c36defc170b72b58978d5e88 418 Pfam PF00464 Serine hydroxymethyltransferase 4 380 1.9E-183 T 13-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Theam_1219 32215bf6c36defc170b72b58978d5e88 418 SUPERFAMILY SSF53383 2 412 5.03E-189 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Theam_1219 32215bf6c36defc170b72b58978d5e88 418 PIRSF PIRSF000412 1 415 2.0E-173 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Theam_1219 32215bf6c36defc170b72b58978d5e88 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 13-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Theam_1219 32215bf6c36defc170b72b58978d5e88 418 Gene3D G3DSA:3.90.1150.10 6 389 9.3E-196 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Theam_1219 32215bf6c36defc170b72b58978d5e88 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 411 54.716 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Theam_0566 76f95360640e549e69603085cecf2c86 219 Pfam PF13394 4Fe-4S single cluster domain 24 102 8.1E-12 T 13-10-2018 Theam_0566 76f95360640e549e69603085cecf2c86 219 PIRSF PIRSF000370 1 219 2.0E-45 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Theam_0566 76f95360640e549e69603085cecf2c86 219 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 219 39.628 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Theam_0566 76f95360640e549e69603085cecf2c86 219 Pfam PF04055 Radical SAM superfamily 26 109 2.2E-11 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0566 76f95360640e549e69603085cecf2c86 219 SUPERFAMILY SSF102114 20 177 1.02E-15 T 13-10-2018 Theam_0566 76f95360640e549e69603085cecf2c86 219 Gene3D G3DSA:3.20.20.70 2 219 1.9E-29 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1599 a16c964c534b71e57c7006505288fa3c 97 SUPERFAMILY SSF81301 5 95 6.33E-22 T 13-10-2018 Theam_1599 a16c964c534b71e57c7006505288fa3c 97 Pfam PF01909 Nucleotidyltransferase domain 11 92 4.0E-14 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Theam_1599 a16c964c534b71e57c7006505288fa3c 97 Gene3D G3DSA:3.30.460.10 3 96 5.0E-22 T 13-10-2018 Theam_1282 70c179eac8b3f9e5008ff36edb61a28e 461 Gene3D G3DSA:3.40.120.10 165 356 3.2E-59 T 13-10-2018 Theam_1282 70c179eac8b3f9e5008ff36edb61a28e 461 Gene3D G3DSA:3.40.120.10 253 362 3.2E-59 T 13-10-2018 Theam_1282 70c179eac8b3f9e5008ff36edb61a28e 461 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 134 3.8E-38 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_1282 70c179eac8b3f9e5008ff36edb61a28e 461 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 369 7.1E-26 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_1282 70c179eac8b3f9e5008ff36edb61a28e 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 2.8E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_1282 70c179eac8b3f9e5008ff36edb61a28e 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 203 216 2.8E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_1282 70c179eac8b3f9e5008ff36edb61a28e 461 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 2.8E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_1282 70c179eac8b3f9e5008ff36edb61a28e 461 SUPERFAMILY SSF55957 362 460 1.57E-20 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_1282 70c179eac8b3f9e5008ff36edb61a28e 461 Gene3D G3DSA:3.40.120.10 1 161 2.6E-44 T 13-10-2018 Theam_1282 70c179eac8b3f9e5008ff36edb61a28e 461 Gene3D G3DSA:3.30.310.50 372 460 1.3E-26 T 13-10-2018 Theam_1282 70c179eac8b3f9e5008ff36edb61a28e 461 SUPERFAMILY SSF53738 240 376 1.69E-30 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_1282 70c179eac8b3f9e5008ff36edb61a28e 461 SUPERFAMILY SSF53738 2 176 1.31E-40 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_1282 70c179eac8b3f9e5008ff36edb61a28e 461 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 391 450 2.0E-9 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_1282 70c179eac8b3f9e5008ff36edb61a28e 461 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 151 252 6.3E-25 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Theam_1036 2c1f324373812293f2c5d5f82068df53 236 SMART SM00967 2 75 6.5E-21 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Theam_1036 2c1f324373812293f2c5d5f82068df53 236 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 233 1.3E-53 T 13-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Theam_1036 2c1f324373812293f2c5d5f82068df53 236 Gene3D G3DSA:3.30.1330.30 1 71 6.6E-11 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like Theam_1036 2c1f324373812293f2c5d5f82068df53 236 Pfam PF00588 SpoU rRNA Methylase family 91 228 2.0E-34 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Theam_1036 2c1f324373812293f2c5d5f82068df53 236 Gene3D G3DSA:3.40.1280.10 72 235 2.2E-41 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Theam_1036 2c1f324373812293f2c5d5f82068df53 236 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 2 74 7.7E-20 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Theam_1036 2c1f324373812293f2c5d5f82068df53 236 SUPERFAMILY SSF75217 63 234 1.08E-38 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Theam_1036 2c1f324373812293f2c5d5f82068df53 236 SUPERFAMILY SSF55315 1 71 6.83E-15 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like Theam_0787 22cdda77cac47d38952c6b54121b52fa 348 Gene3D G3DSA:3.40.50.300 1 228 2.9E-56 T 13-10-2018 Theam_0787 22cdda77cac47d38952c6b54121b52fa 348 Pfam PF00005 ABC transporter 17 153 1.5E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_0787 22cdda77cac47d38952c6b54121b52fa 348 SUPERFAMILY SSF50331 232 338 3.23E-6 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Theam_0787 22cdda77cac47d38952c6b54121b52fa 348 SUPERFAMILY SSF52540 5 231 7.5E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0787 22cdda77cac47d38952c6b54121b52fa 348 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Theam_0787 22cdda77cac47d38952c6b54121b52fa 348 SMART SM00382 22 203 3.0E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1217 45360bdc70bfd25159b5d212edf97fc4 243 SUPERFAMILY SSF53613 4 225 4.83E-39 T 13-10-2018 IPR029056 Ribokinase-like Theam_1217 45360bdc70bfd25159b5d212edf97fc4 243 Pfam PF08543 Phosphomethylpyrimidine kinase 13 231 1.5E-40 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Theam_1217 45360bdc70bfd25159b5d212edf97fc4 243 Gene3D G3DSA:3.40.1190.20 3 239 1.3E-47 T 13-10-2018 IPR029056 Ribokinase-like Theam_1801 dc9170254de81da8445f23a397b35d3f 173 Pfam PF08334 Type II secretion system (T2SS), protein G 38 92 1.1E-5 T 13-10-2018 IPR013545 Type II secretion system protein G Theam_1801 dc9170254de81da8445f23a397b35d3f 173 Gene3D G3DSA:3.30.700.10 13 160 4.3E-16 T 13-10-2018 Theam_1801 dc9170254de81da8445f23a397b35d3f 173 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 2.7E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1801 dc9170254de81da8445f23a397b35d3f 173 SUPERFAMILY SSF54523 13 130 2.0E-19 T 13-10-2018 Theam_1801 dc9170254de81da8445f23a397b35d3f 173 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 33 6.6E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1378 9b361fc09ac1f6bd42aa75a4ed9a1c75 540 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 4 533 1.0E-159 T 13-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 Theam_1378 9b361fc09ac1f6bd42aa75a4ed9a1c75 540 SUPERFAMILY SSF53323 4 162 3.79E-23 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Theam_1378 9b361fc09ac1f6bd42aa75a4ed9a1c75 540 Gene3D G3DSA:3.40.920.10 2 160 2.6E-20 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Theam_1378 9b361fc09ac1f6bd42aa75a4ed9a1c75 540 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 184 413 6.3E-57 T 13-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Theam_1378 9b361fc09ac1f6bd42aa75a4ed9a1c75 540 SUPERFAMILY SSF52518 174 421 6.24E-65 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Theam_1378 9b361fc09ac1f6bd42aa75a4ed9a1c75 540 SUPERFAMILY SSF52922 440 532 1.73E-6 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Theam_1378 9b361fc09ac1f6bd42aa75a4ed9a1c75 540 Gene3D G3DSA:3.40.50.970 161 357 1.9E-68 T 13-10-2018 Theam_1378 9b361fc09ac1f6bd42aa75a4ed9a1c75 540 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 12 156 2.1E-21 T 13-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Theam_1378 9b361fc09ac1f6bd42aa75a4ed9a1c75 540 Gene3D G3DSA:3.40.50.920 432 537 4.0E-14 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Theam_1640 3b37499c2e6a08763233e766fbf2126a 255 Gene3D G3DSA:3.90.550.10 1 217 3.2E-20 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_1640 3b37499c2e6a08763233e766fbf2126a 255 SUPERFAMILY SSF53448 1 135 5.95E-21 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_1640 3b37499c2e6a08763233e766fbf2126a 255 Pfam PF00535 Glycosyl transferase family 2 5 112 7.2E-15 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Theam_1410 847bd4a01feb6bc2edffd3aceb6fcce2 75 Gene3D G3DSA:3.30.70.20 1 37 1.4E-7 T 13-10-2018 Theam_1410 847bd4a01feb6bc2edffd3aceb6fcce2 75 SUPERFAMILY SSF54862 6 69 1.29E-15 T 13-10-2018 Theam_1410 847bd4a01feb6bc2edffd3aceb6fcce2 75 Gene3D G3DSA:3.30.70.3270 38 75 1.0E-5 T 13-10-2018 Theam_1410 847bd4a01feb6bc2edffd3aceb6fcce2 75 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 46 57 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_1410 847bd4a01feb6bc2edffd3aceb6fcce2 75 Pfam PF12838 4Fe-4S dicluster domain 14 57 5.3E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_0140 2d0ea466843ab338b742981f56103d97 282 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 94 5.3E-28 T 13-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Theam_0140 2d0ea466843ab338b742981f56103d97 282 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 121 199 2.0E-8 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Theam_0140 2d0ea466843ab338b742981f56103d97 282 Gene3D G3DSA:3.40.50.720 106 246 1.3E-92 T 13-10-2018 Theam_0140 2d0ea466843ab338b742981f56103d97 282 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 9 280 4.3E-83 T 13-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Theam_0140 2d0ea466843ab338b742981f56103d97 282 Gene3D G3DSA:3.40.50.10860 10 267 1.3E-92 T 13-10-2018 Theam_0140 2d0ea466843ab338b742981f56103d97 282 SUPERFAMILY SSF53223 3 106 6.91E-33 T 13-10-2018 Theam_0140 2d0ea466843ab338b742981f56103d97 282 SUPERFAMILY SSF51735 107 277 7.53E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0140 2d0ea466843ab338b742981f56103d97 282 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 278 36.379 T 13-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Theam_0945 3c6c46144dfe77ea4ac0ebb33330ae69 270 Gene3D G3DSA:3.30.310.10 1 71 3.3E-43 T 13-10-2018 IPR012295 TBP domain superfamily Theam_0945 3c6c46144dfe77ea4ac0ebb33330ae69 270 Pfam PF01351 Ribonuclease HII 75 240 1.8E-29 T 13-10-2018 IPR024567 Ribonuclease HII/HIII domain Theam_0945 3c6c46144dfe77ea4ac0ebb33330ae69 270 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 1 265 8.3E-55 T 13-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 Theam_0945 3c6c46144dfe77ea4ac0ebb33330ae69 270 Gene3D G3DSA:3.30.420.10 72 270 1.7E-75 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Theam_0945 3c6c46144dfe77ea4ac0ebb33330ae69 270 SUPERFAMILY SSF53098 73 264 3.03E-37 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Theam_1447 4a1c404bb4cc959048c84ee5c874b7e3 218 Gene3D G3DSA:2.60.40.4070 102 183 1.3E-18 T 13-10-2018 Theam_1447 4a1c404bb4cc959048c84ee5c874b7e3 218 Gene3D G3DSA:2.30.30.910 90 203 1.3E-18 T 13-10-2018 Theam_1447 4a1c404bb4cc959048c84ee5c874b7e3 218 Pfam PF13860 FlgD Ig-like domain 102 173 6.1E-16 T 13-10-2018 IPR025965 FlgD Ig-like domain Theam_1447 4a1c404bb4cc959048c84ee5c874b7e3 218 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 76 2.3E-8 T 13-10-2018 IPR005648 Flagellar hook capping protein Theam_1804 a2c5a9e54d369465d373bcf478d926df 528 Gene3D G3DSA:3.30.450.90 99 229 1.2E-14 T 13-10-2018 Theam_1804 a2c5a9e54d369465d373bcf478d926df 528 SMART SM00382 256 379 2.6E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1804 a2c5a9e54d369465d373bcf478d926df 528 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 331 345 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Theam_1804 a2c5a9e54d369465d373bcf478d926df 528 Pfam PF00437 Type II/IV secretion system protein 119 405 4.4E-57 T 13-10-2018 IPR001482 Type II/IV secretion system protein Theam_1804 a2c5a9e54d369465d373bcf478d926df 528 SUPERFAMILY SSF52540 109 527 3.9E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1804 a2c5a9e54d369465d373bcf478d926df 528 Gene3D G3DSA:3.40.50.300 231 527 3.2E-75 T 13-10-2018 Theam_0697 f26f9e2f0afec8c41d18b2d7db181b5a 153 Gene3D G3DSA:1.10.287.370 9 138 1.2E-23 T 13-10-2018 IPR009053 Prefoldin Theam_0697 f26f9e2f0afec8c41d18b2d7db181b5a 153 Hamap MF_00308 Prefoldin subunit alpha [pfdA]. 4 139 13.846 T 13-10-2018 IPR011599 Prefoldin alpha subunit, archaea-type GO:0006457|GO:0016272|GO:0051082 Reactome: R-HSA-389957 Theam_0697 f26f9e2f0afec8c41d18b2d7db181b5a 153 SUPERFAMILY SSF46579 10 136 1.2E-20 T 13-10-2018 Theam_0697 f26f9e2f0afec8c41d18b2d7db181b5a 153 Pfam PF02996 Prefoldin subunit 22 137 2.6E-22 T 13-10-2018 IPR004127 Prefoldin alpha-like Theam_0697 f26f9e2f0afec8c41d18b2d7db181b5a 153 TIGRFAM TIGR00293 TIGR00293: prefoldin, alpha subunit 12 138 1.5E-28 T 13-10-2018 IPR011599 Prefoldin alpha subunit, archaea-type GO:0006457|GO:0016272|GO:0051082 Reactome: R-HSA-389957 Theam_0052 6fc4978c7b28d916b160ebdc55f42542 167 Gene3D G3DSA:1.10.530.10 23 167 2.7E-15 T 13-10-2018 Theam_0052 6fc4978c7b28d916b160ebdc55f42542 167 SUPERFAMILY SSF53955 30 165 2.91E-18 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Theam_0052 6fc4978c7b28d916b160ebdc55f42542 167 Pfam PF01464 Transglycosylase SLT domain 24 150 5.5E-14 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Theam_0001 89c43ee46cee69070b2fed22b105431c 492 SUPERFAMILY SSF56322 15 487 3.01E-160 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Theam_0001 89c43ee46cee69070b2fed22b105431c 492 Gene3D G3DSA:3.60.120.10 2 491 3.1E-182 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Theam_0001 89c43ee46cee69070b2fed22b105431c 492 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 27 484 2.7E-172 T 13-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Theam_0001 89c43ee46cee69070b2fed22b105431c 492 PRINTS PR00095 Anthranilate synthase component I signature 433 447 4.4E-26 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Theam_0001 89c43ee46cee69070b2fed22b105431c 492 PRINTS PR00095 Anthranilate synthase component I signature 418 432 4.4E-26 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Theam_0001 89c43ee46cee69070b2fed22b105431c 492 PRINTS PR00095 Anthranilate synthase component I signature 324 337 4.4E-26 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Theam_0001 89c43ee46cee69070b2fed22b105431c 492 PRINTS PR00095 Anthranilate synthase component I signature 338 351 4.4E-26 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Theam_0001 89c43ee46cee69070b2fed22b105431c 492 Pfam PF00425 chorismate binding enzyme 223 476 2.2E-104 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Theam_0001 89c43ee46cee69070b2fed22b105431c 492 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 168 8.8E-28 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Theam_0363 955a6c52271733fa9e7ee8789280e0e7 239 PIRSF PIRSF015601 1 237 7.0E-57 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Theam_0363 955a6c52271733fa9e7ee8789280e0e7 239 SUPERFAMILY SSF75217 72 238 1.44E-42 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Theam_0363 955a6c52271733fa9e7ee8789280e0e7 239 Gene3D G3DSA:2.40.240.20 1 68 3.4E-19 T 13-10-2018 Theam_0363 955a6c52271733fa9e7ee8789280e0e7 239 Pfam PF04452 RNA methyltransferase 16 232 3.5E-63 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Theam_0363 955a6c52271733fa9e7ee8789280e0e7 239 Gene3D G3DSA:3.40.1280.10 70 239 3.4E-50 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Theam_0363 955a6c52271733fa9e7ee8789280e0e7 239 SUPERFAMILY SSF88697 4 67 4.47E-14 T 13-10-2018 IPR015947 PUA-like superfamily Theam_0363 955a6c52271733fa9e7ee8789280e0e7 239 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 13 237 5.4E-52 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Theam_1570 5ce52132ec0ec197f900b0b022834dd6 213 SUPERFAMILY SSF109604 8 177 6.59E-27 T 13-10-2018 Theam_1570 5ce52132ec0ec197f900b0b022834dd6 213 Gene3D G3DSA:1.10.3210.10 5 163 7.4E-24 T 13-10-2018 Theam_1570 5ce52132ec0ec197f900b0b022834dd6 213 Pfam PF08668 HDOD domain 9 123 9.1E-20 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Theam_1285 2be98f48963e87901cd86b70fdea6c29 419 Gene3D G3DSA:1.25.40.10 232 332 8.7E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1229 123826db6f2dec74eea121343528dde5 242 Hamap MF_01805 Segregation and condensation protein A [scpA]. 2 233 19.082 T 13-10-2018 IPR003768 Segregation and condensation protein A Theam_1229 123826db6f2dec74eea121343528dde5 242 Pfam PF02616 Segregation and condensation protein ScpA 19 214 2.7E-21 T 13-10-2018 IPR003768 Segregation and condensation protein A Theam_1551 9e5b616f644805a01276554b29b8ea60 345 SUPERFAMILY SSF55073 180 331 2.75E-41 T 13-10-2018 IPR029787 Nucleotide cyclase Theam_1551 9e5b616f644805a01276554b29b8ea60 345 Gene3D G3DSA:3.30.70.270 169 336 6.8E-49 T 13-10-2018 Theam_1551 9e5b616f644805a01276554b29b8ea60 345 Pfam PF00990 Diguanylate cyclase, GGDEF domain 175 327 2.9E-43 T 13-10-2018 IPR000160 GGDEF domain Theam_1551 9e5b616f644805a01276554b29b8ea60 345 SMART SM00267 164 332 8.3E-53 T 13-10-2018 IPR000160 GGDEF domain Theam_1551 9e5b616f644805a01276554b29b8ea60 345 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 172 330 1.3E-45 T 13-10-2018 IPR000160 GGDEF domain Theam_0381 35af3d93730e10e7695fd16a39c25d07 342 Gene3D G3DSA:1.10.10.10 1 85 1.7E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0381 35af3d93730e10e7695fd16a39c25d07 342 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 4 331 23.672 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Theam_0381 35af3d93730e10e7695fd16a39c25d07 342 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 6 338 4.6E-77 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Theam_0381 35af3d93730e10e7695fd16a39c25d07 342 Gene3D G3DSA:3.30.390.60 134 227 6.1E-29 T 13-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Theam_0381 35af3d93730e10e7695fd16a39c25d07 342 SUPERFAMILY SSF46785 5 81 2.73E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0381 35af3d93730e10e7695fd16a39c25d07 342 Gene3D G3DSA:3.30.450.40 230 338 6.1E-29 T 13-10-2018 IPR029016 GAF-like domain superfamily Theam_0381 35af3d93730e10e7695fd16a39c25d07 342 SUPERFAMILY SSF55781 97 340 1.84E-35 T 13-10-2018 Theam_0381 35af3d93730e10e7695fd16a39c25d07 342 PIRSF PIRSF005485 2 342 2.4E-78 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Theam_0381 35af3d93730e10e7695fd16a39c25d07 342 Pfam PF01628 HrcA protein C terminal domain 109 324 3.4E-40 T 13-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 Theam_1487 e8d5e64ff9c813f92b945015726dfdbb 324 SMART SM00471 161 294 3.0E-8 T 13-10-2018 IPR003607 HD/PDEase domain Theam_1487 e8d5e64ff9c813f92b945015726dfdbb 324 SUPERFAMILY SSF50249 20 94 8.08E-7 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_1487 e8d5e64ff9c813f92b945015726dfdbb 324 TIGRFAM TIGR00277 HDIG: HDIG domain 164 230 1.8E-9 T 13-10-2018 IPR006675 HDIG domain Theam_1487 e8d5e64ff9c813f92b945015726dfdbb 324 Pfam PF01336 OB-fold nucleic acid binding domain 29 91 1.3E-8 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Theam_1487 e8d5e64ff9c813f92b945015726dfdbb 324 Pfam PF01966 HD domain 166 283 1.5E-14 T 13-10-2018 IPR006674 HD domain Theam_1487 e8d5e64ff9c813f92b945015726dfdbb 324 Gene3D G3DSA:1.10.3210.10 154 316 2.4E-20 T 13-10-2018 Theam_1487 e8d5e64ff9c813f92b945015726dfdbb 324 Gene3D G3DSA:2.40.50.140 6 99 2.9E-6 T 13-10-2018 Theam_1487 e8d5e64ff9c813f92b945015726dfdbb 324 SUPERFAMILY SSF109604 151 284 3.14E-20 T 13-10-2018 Theam_1569 d84de338d341b448d11fd0a5052e2559 445 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 155 240 2.5E-7 T 13-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 Theam_1569 d84de338d341b448d11fd0a5052e2559 445 Pfam PF01029 NusB family 7 120 1.5E-21 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Theam_1569 d84de338d341b448d11fd0a5052e2559 445 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 325 336 - T 13-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 Theam_1569 d84de338d341b448d11fd0a5052e2559 445 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 443 1.5E-95 T 13-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 Theam_1569 d84de338d341b448d11fd0a5052e2559 445 Gene3D G3DSA:3.40.50.150 144 442 8.8E-77 T 13-10-2018 Theam_1569 d84de338d341b448d11fd0a5052e2559 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 256 266 4.3E-24 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Theam_1569 d84de338d341b448d11fd0a5052e2559 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 376 392 4.3E-24 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Theam_1569 d84de338d341b448d11fd0a5052e2559 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 326 338 4.3E-24 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Theam_1569 d84de338d341b448d11fd0a5052e2559 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 426 443 4.3E-24 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Theam_1569 d84de338d341b448d11fd0a5052e2559 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 227 241 4.3E-24 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Theam_1569 d84de338d341b448d11fd0a5052e2559 445 Pfam PF01189 16S rRNA methyltransferase RsmB/F 244 441 4.3E-54 T 13-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Theam_1569 d84de338d341b448d11fd0a5052e2559 445 Gene3D G3DSA:1.10.940.10 4 137 6.1E-32 T 13-10-2018 IPR035926 NusB-like superfamily Theam_1569 d84de338d341b448d11fd0a5052e2559 445 SUPERFAMILY SSF48013 6 127 3.53E-25 T 13-10-2018 IPR035926 NusB-like superfamily Theam_1569 d84de338d341b448d11fd0a5052e2559 445 SUPERFAMILY SSF53335 137 441 3.8E-73 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_1042 a06f1ba0d6ebebaa46fc70497eedf6f5 177 SUPERFAMILY SSF56420 2 167 2.49E-58 T 13-10-2018 IPR036821 Peptide deformylase superfamily Theam_1042 a06f1ba0d6ebebaa46fc70497eedf6f5 177 Gene3D G3DSA:3.90.45.10 1 171 2.2E-60 T 13-10-2018 IPR036821 Peptide deformylase superfamily Theam_1042 a06f1ba0d6ebebaa46fc70497eedf6f5 177 PRINTS PR01576 Peptide deformylase signature 31 60 6.9E-38 T 13-10-2018 IPR023635 Peptide deformylase Theam_1042 a06f1ba0d6ebebaa46fc70497eedf6f5 177 PRINTS PR01576 Peptide deformylase signature 103 121 6.9E-38 T 13-10-2018 IPR023635 Peptide deformylase Theam_1042 a06f1ba0d6ebebaa46fc70497eedf6f5 177 PRINTS PR01576 Peptide deformylase signature 122 151 6.9E-38 T 13-10-2018 IPR023635 Peptide deformylase Theam_1042 a06f1ba0d6ebebaa46fc70497eedf6f5 177 PRINTS PR01576 Peptide deformylase signature 91 102 6.9E-38 T 13-10-2018 IPR023635 Peptide deformylase Theam_1042 a06f1ba0d6ebebaa46fc70497eedf6f5 177 Hamap MF_00163 Peptide deformylase [def]. 1 164 28.936 T 13-10-2018 IPR023635 Peptide deformylase Theam_1042 a06f1ba0d6ebebaa46fc70497eedf6f5 177 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 3.3E-52 T 13-10-2018 IPR023635 Peptide deformylase Theam_1042 a06f1ba0d6ebebaa46fc70497eedf6f5 177 Pfam PF01327 Polypeptide deformylase 3 154 8.3E-52 T 13-10-2018 IPR023635 Peptide deformylase Theam_1042 a06f1ba0d6ebebaa46fc70497eedf6f5 177 PIRSF PIRSF004749 1 174 7.0E-55 T 13-10-2018 IPR023635 Peptide deformylase Theam_0488 0845100d663620618db82ae166ae8c4b 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 55 1.2E-18 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Theam_0488 0845100d663620618db82ae166ae8c4b 163 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 161 2.2E-55 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Theam_0488 0845100d663620618db82ae166ae8c4b 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 116 138 2.8E-35 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Theam_0488 0845100d663620618db82ae166ae8c4b 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 2.8E-35 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Theam_0488 0845100d663620618db82ae166ae8c4b 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 2.8E-35 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Theam_0488 0845100d663620618db82ae166ae8c4b 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 89 105 2.8E-35 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Theam_0488 0845100d663620618db82ae166ae8c4b 163 Pfam PF01467 Cytidylyltransferase-like 6 137 1.4E-16 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Theam_0488 0845100d663620618db82ae166ae8c4b 163 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 162 34.031 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Theam_0488 0845100d663620618db82ae166ae8c4b 163 SUPERFAMILY SSF52374 3 160 1.69E-41 T 13-10-2018 Theam_0488 0845100d663620618db82ae166ae8c4b 163 Gene3D G3DSA:3.40.50.620 1 163 5.8E-54 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1502 b8d7828793c06dd1534f6dc13b0a4e55 1150 Gene3D G3DSA:2.40.50.140 978 1063 3.9E-5 T 13-10-2018 Theam_1502 b8d7828793c06dd1534f6dc13b0a4e55 1150 Pfam PF01336 OB-fold nucleic acid binding domain 988 1063 8.9E-7 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Theam_1502 b8d7828793c06dd1534f6dc13b0a4e55 1150 Pfam PF02811 PHP domain 9 182 7.7E-57 T 13-10-2018 IPR004013 PHP domain GO:0003824 Theam_1502 b8d7828793c06dd1534f6dc13b0a4e55 1150 Gene3D G3DSA:1.10.150.870 785 884 6.7E-8 T 13-10-2018 Theam_1502 b8d7828793c06dd1534f6dc13b0a4e55 1150 SUPERFAMILY SSF89550 7 272 1.08E-42 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Theam_1502 b8d7828793c06dd1534f6dc13b0a4e55 1150 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 7 1024 0.0 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_1502 b8d7828793c06dd1534f6dc13b0a4e55 1150 Pfam PF14579 Helix-hairpin-helix motif 807 894 2.1E-30 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_1502 b8d7828793c06dd1534f6dc13b0a4e55 1150 Gene3D G3DSA:3.20.20.140 2 277 5.8E-119 T 13-10-2018 Theam_1502 b8d7828793c06dd1534f6dc13b0a4e55 1150 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 304 733 1.1E-187 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_1502 b8d7828793c06dd1534f6dc13b0a4e55 1150 Gene3D G3DSA:1.10.10.1600 443 519 3.4E-24 T 13-10-2018 Theam_1502 b8d7828793c06dd1534f6dc13b0a4e55 1150 SMART SM00481 8 75 4.0E-34 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Theam_1474 93d08b7534988a60003845ce855da43d 308 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Theam_1474 93d08b7534988a60003845ce855da43d 308 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 4 303 1.2E-121 T 13-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Theam_1474 93d08b7534988a60003845ce855da43d 308 Gene3D G3DSA:3.50.50.60 121 243 3.4E-117 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1474 93d08b7534988a60003845ce855da43d 308 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 292 3.8E-50 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Theam_1474 93d08b7534988a60003845ce855da43d 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 59 69 8.5E-64 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Theam_1474 93d08b7534988a60003845ce855da43d 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 8.5E-64 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Theam_1474 93d08b7534988a60003845ce855da43d 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 8.5E-64 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Theam_1474 93d08b7534988a60003845ce855da43d 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 38 53 8.5E-64 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Theam_1474 93d08b7534988a60003845ce855da43d 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 8.5E-64 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Theam_1474 93d08b7534988a60003845ce855da43d 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 232 253 8.5E-64 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Theam_1474 93d08b7534988a60003845ce855da43d 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 8.5E-64 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Theam_1474 93d08b7534988a60003845ce855da43d 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 8.5E-64 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Theam_1474 93d08b7534988a60003845ce855da43d 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 284 8.5E-64 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Theam_1474 93d08b7534988a60003845ce855da43d 308 Gene3D G3DSA:3.50.50.60 6 302 3.4E-117 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1474 93d08b7534988a60003845ce855da43d 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 4.7E-35 T 13-10-2018 Theam_1474 93d08b7534988a60003845ce855da43d 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 4.7E-35 T 13-10-2018 Theam_1474 93d08b7534988a60003845ce855da43d 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 4.7E-35 T 13-10-2018 Theam_1474 93d08b7534988a60003845ce855da43d 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.7E-35 T 13-10-2018 Theam_1474 93d08b7534988a60003845ce855da43d 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 4.7E-35 T 13-10-2018 Theam_1474 93d08b7534988a60003845ce855da43d 308 SUPERFAMILY SSF51905 2 303 2.59E-51 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1128 3b6de0116fe6506b01c99d5f33b65805 252 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 27 241 1.5E-85 T 13-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 Theam_1128 3b6de0116fe6506b01c99d5f33b65805 252 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 56 220 7.8E-30 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Theam_1128 3b6de0116fe6506b01c99d5f33b65805 252 SUPERFAMILY SSF52540 27 244 1.49E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1128 3b6de0116fe6506b01c99d5f33b65805 252 PIRSF PIRSF005624 19 252 3.2E-93 T 13-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 Theam_1128 3b6de0116fe6506b01c99d5f33b65805 252 Gene3D G3DSA:3.40.50.300 36 250 2.2E-64 T 13-10-2018 Theam_0568 b5c59da7a018c80a4eca381564c40b90 170 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 5 170 2.6E-53 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Theam_0568 b5c59da7a018c80a4eca381564c40b90 170 SUPERFAMILY SSF52540 4 170 1.29E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0568 b5c59da7a018c80a4eca381564c40b90 170 PIRSF PIRSF015617 2 170 1.1E-47 T 13-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Theam_0568 b5c59da7a018c80a4eca381564c40b90 170 Gene3D G3DSA:3.40.50.300 2 170 6.1E-56 T 13-10-2018 Theam_0924 7dd42e1888648abafaf64166b5f26520 353 PIRSF PIRSF005622 3 353 1.2E-131 T 13-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Theam_0924 7dd42e1888648abafaf64166b5f26520 353 Pfam PF01924 Hydrogenase formation hypA family 10 351 9.0E-133 T 13-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Theam_0924 7dd42e1888648abafaf64166b5f26520 353 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 12 352 9.0E-119 T 13-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Theam_0924 7dd42e1888648abafaf64166b5f26520 353 Gene3D G3DSA:1.10.10.2140 304 353 2.9E-23 T 13-10-2018 Theam_0924 7dd42e1888648abafaf64166b5f26520 353 Gene3D G3DSA:3.40.50.11750 15 249 2.9E-101 T 13-10-2018 Theam_0924 7dd42e1888648abafaf64166b5f26520 353 Gene3D G3DSA:3.40.50.11740 58 289 2.9E-101 T 13-10-2018 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 Pfam PF00702 haloacid dehalogenase-like hydrolase 312 521 8.2E-11 T 13-10-2018 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 Gene3D G3DSA:3.40.50.1000 465 550 3.0E-6 T 13-10-2018 IPR023214 HAD superfamily Theam_0995 ab428d0d3198603542140c2e3aac893d 884 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 318 324 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 SUPERFAMILY SSF81653 117 215 1.83E-28 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 SMART SM00831 6 79 7.8E-24 T 13-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 Gene3D G3DSA:1.20.1110.10 189 332 1.3E-29 T 13-10-2018 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 Gene3D G3DSA:1.20.1110.10 597 862 2.9E-61 T 13-10-2018 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 Gene3D G3DSA:1.20.1110.10 56 132 9.3E-13 T 13-10-2018 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 165 179 1.4E-28 T 13-10-2018 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 616 635 1.4E-28 T 13-10-2018 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 639 651 1.4E-28 T 13-10-2018 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 316 330 1.4E-28 T 13-10-2018 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 Pfam PF00122 E1-E2 ATPase 115 296 1.9E-52 T 13-10-2018 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 Gene3D G3DSA:3.40.1110.10 333 464 3.8E-34 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 SUPERFAMILY SSF81665 7 863 8.37E-93 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 Pfam PF00690 Cation transporter/ATPase, N-terminus 8 74 1.7E-19 T 13-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 Pfam PF00702 haloacid dehalogenase-like hydrolase 581 630 5.8E-8 T 13-10-2018 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 SUPERFAMILY SSF56784 312 665 1.83E-42 T 13-10-2018 IPR036412 HAD-like superfamily Theam_0995 ab428d0d3198603542140c2e3aac893d 884 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 383 507 2.1E-19 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 86 352 6.0E-44 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 582 705 1.4E-26 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 778 799 7.5E-7 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 430 448 7.5E-7 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Theam_0995 ab428d0d3198603542140c2e3aac893d 884 TIGRFAM TIGR01647 ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 26 525 1.7E-195 T 13-10-2018 IPR006534 P-type ATPase, subfamily IIIA GO:0008553|GO:0016021|GO:0120029 KEGG: 00190+3.6.3.6 Theam_0187 1ac08e4083fcd5a1ff03c61dc9651265 735 Pfam PF00962 Adenosine/AMP deaminase 641 710 8.6E-6 T 13-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 Theam_0187 1ac08e4083fcd5a1ff03c61dc9651265 735 Gene3D G3DSA:3.20.20.140 628 735 1.2E-12 T 13-10-2018 Theam_0187 1ac08e4083fcd5a1ff03c61dc9651265 735 Gene3D G3DSA:3.20.20.140 242 503 6.7E-16 T 13-10-2018 Theam_0187 1ac08e4083fcd5a1ff03c61dc9651265 735 SUPERFAMILY SSF51556 381 734 3.31E-17 T 13-10-2018 IPR032466 Metal-dependent hydrolase Theam_1373 737a51223c3065196deac90593fa5f3f 149 SUPERFAMILY SSF47113 3 148 1.74E-51 T 13-10-2018 IPR009072 Histone-fold GO:0046982 Theam_1373 737a51223c3065196deac90593fa5f3f 149 Gene3D G3DSA:1.10.20.10 1 149 6.2E-57 T 13-10-2018 IPR009072 Histone-fold GO:0046982 Theam_1373 737a51223c3065196deac90593fa5f3f 149 Pfam PF09123 Domain of unknown function (DUF1931) 9 146 1.1E-54 T 13-10-2018 IPR015207 Protein of unknown function DUF1931 Theam_0305 7b754c3ed3f7713e0e92f603c4a0a708 279 PIRSF PIRSF005917 2 279 1.1E-101 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Theam_0305 7b754c3ed3f7713e0e92f603c4a0a708 279 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 209 1.2E-36 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Theam_0305 7b754c3ed3f7713e0e92f603c4a0a708 279 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 9 229 38.083 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Theam_0305 7b754c3ed3f7713e0e92f603c4a0a708 279 SUPERFAMILY SSF53790 8 227 3.93E-80 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Theam_0305 7b754c3ed3f7713e0e92f603c4a0a708 279 Gene3D G3DSA:3.40.1010.10 5 118 1.6E-48 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Theam_0305 7b754c3ed3f7713e0e92f603c4a0a708 279 Gene3D G3DSA:3.30.950.10 119 235 4.8E-35 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Theam_0305 7b754c3ed3f7713e0e92f603c4a0a708 279 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 88 99 - T 13-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 Theam_0305 7b754c3ed3f7713e0e92f603c4a0a708 279 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 10 274 2.9E-82 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Theam_1472 ca13eeb121cee384d5b8c47882ba7ce5 194 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 188 1.1E-63 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Theam_1472 ca13eeb121cee384d5b8c47882ba7ce5 194 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 4 192 27.43 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Theam_1472 ca13eeb121cee384d5b8c47882ba7ce5 194 Gene3D G3DSA:3.40.50.300 1 194 6.0E-55 T 13-10-2018 Theam_1472 ca13eeb121cee384d5b8c47882ba7ce5 194 SUPERFAMILY SSF52540 19 192 6.74E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1472 ca13eeb121cee384d5b8c47882ba7ce5 194 Pfam PF01926 50S ribosome-binding GTPase 25 143 1.4E-22 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_0516 f583153dc38e116b5cd1519d94187d0c 87 Gene3D G3DSA:2.20.28.10 2 45 4.4E-5 T 13-10-2018 Theam_1178 56055607fbc02be81954d07fb26d82b0 142 ProSitePatterns PS00938 Initiation factor 3 signature. 30 43 - T 13-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 Theam_1178 56055607fbc02be81954d07fb26d82b0 142 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 55 140 6.3E-33 T 13-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Theam_1178 56055607fbc02be81954d07fb26d82b0 142 Gene3D G3DSA:3.30.110.10 48 142 8.5E-34 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Theam_1178 56055607fbc02be81954d07fb26d82b0 142 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 142 22.691 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Theam_1178 56055607fbc02be81954d07fb26d82b0 142 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 48 9.8E-21 T 13-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Theam_1178 56055607fbc02be81954d07fb26d82b0 142 Gene3D G3DSA:3.10.20.80 1 47 6.1E-22 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Theam_1178 56055607fbc02be81954d07fb26d82b0 142 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 5 142 1.4E-56 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Theam_1178 56055607fbc02be81954d07fb26d82b0 142 SUPERFAMILY SSF55200 56 141 6.02E-30 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Theam_1178 56055607fbc02be81954d07fb26d82b0 142 SUPERFAMILY SSF54364 1 50 3.66E-19 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Theam_0950 8e433a8edc05e08d9bd97de6b538280e 271 Gene3D G3DSA:1.10.150.130 1 99 1.4E-18 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Theam_0950 8e433a8edc05e08d9bd97de6b538280e 271 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 14 79 5.9E-10 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Theam_0950 8e433a8edc05e08d9bd97de6b538280e 271 SUPERFAMILY SSF56349 3 266 1.5E-60 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Theam_0950 8e433a8edc05e08d9bd97de6b538280e 271 Pfam PF00589 Phage integrase family 105 259 3.9E-30 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Theam_0950 8e433a8edc05e08d9bd97de6b538280e 271 Gene3D G3DSA:1.10.443.10 100 269 7.6E-45 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 19 212 1.9E-37 T 13-10-2018 IPR003111 Lon, substrate-binding domain Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 588 789 1.6E-84 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 370 506 8.4E-26 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 SUPERFAMILY SSF52540 320 605 1.21E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 Gene3D G3DSA:3.30.230.10 611 802 2.1E-78 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 Gene3D G3DSA:1.20.58.1480 133 256 4.3E-37 T 13-10-2018 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 TIGRFAM TIGR00763 lon: endopeptidase La 21 789 1.5E-292 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 SUPERFAMILY SSF54211 613 788 2.5E-52 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 Hamap MF_01973 Lon protease [lon]. 20 790 69.926 T 13-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 SMART SM00382 366 510 1.9E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 SUPERFAMILY SSF88697 19 212 5.47E-43 T 13-10-2018 IPR015947 PUA-like superfamily Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 Gene3D G3DSA:2.30.130.40 13 125 5.4E-34 T 13-10-2018 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 693 701 - T 13-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 PIRSF PIRSF001174 6 793 0.0 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 Gene3D G3DSA:1.10.8.60 510 602 3.0E-34 T 13-10-2018 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 743 761 4.5E-53 T 13-10-2018 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 690 709 4.5E-53 T 13-10-2018 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 374 393 4.5E-53 T 13-10-2018 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 613 629 4.5E-53 T 13-10-2018 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 720 739 4.5E-53 T 13-10-2018 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 Gene3D G3DSA:3.40.50.300 324 509 4.6E-69 T 13-10-2018 Theam_0233 361eb76524a2b78ac26c3d6e657830c1 811 SMART SM00464 19 213 1.9E-59 T 13-10-2018 IPR003111 Lon, substrate-binding domain Theam_1721 8b0ef25d4a1cd106934d6615c4c6dfe8 241 Gene3D G3DSA:1.10.340.30 27 166 9.7E-92 T 13-10-2018 Theam_1721 8b0ef25d4a1cd106934d6615c4c6dfe8 241 Pfam PF09171 N-glycosylase/DNA lyase 10 181 4.2E-45 T 13-10-2018 IPR015254 N-glycosylase/DNA lyase-like GO:0003906|GO:0016799 Theam_1721 8b0ef25d4a1cd106934d6615c4c6dfe8 241 SUPERFAMILY SSF48150 4 213 5.57E-52 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Theam_1721 8b0ef25d4a1cd106934d6615c4c6dfe8 241 Gene3D G3DSA:1.10.1670.10 8 234 9.7E-92 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Theam_1332 4ccb6305ddbbcf80ed1eaef6109b5a65 163 Gene3D G3DSA:1.20.58.1290 63 161 7.5E-26 T 13-10-2018 Theam_1332 4ccb6305ddbbcf80ed1eaef6109b5a65 163 SUPERFAMILY SSF141259 2 66 1.44E-9 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily Theam_1332 4ccb6305ddbbcf80ed1eaef6109b5a65 163 Pfam PF02559 CarD-like/TRCF domain 2 109 1.7E-13 T 13-10-2018 IPR003711 CarD-like/TRCF domain Theam_1332 4ccb6305ddbbcf80ed1eaef6109b5a65 163 SMART SM01058 1 111 2.6E-19 T 13-10-2018 IPR003711 CarD-like/TRCF domain Theam_1332 4ccb6305ddbbcf80ed1eaef6109b5a65 163 Gene3D G3DSA:2.30.30.840 1 62 4.2E-20 T 13-10-2018 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 Gene3D G3DSA:2.30.30.40 522 645 3.2E-35 T 13-10-2018 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 SUPERFAMILY SSF50341 521 650 9.55E-30 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 SUPERFAMILY SSF47226 9 131 1.01E-32 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 SMART SM01231 267 334 2.5E-16 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 521 2.7E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 268 334 2.2E-17 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 Gene3D G3DSA:2.40.50.180 545 605 3.2E-35 T 13-10-2018 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 Pfam PF01627 Hpt domain 11 104 5.2E-21 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 SUPERFAMILY SSF47384 268 335 3.37E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 SMART SM00073 9 106 2.8E-31 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 Gene3D G3DSA:1.10.287.560 267 334 9.7E-18 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 Gene3D G3DSA:3.30.565.10 335 521 3.7E-63 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 SUPERFAMILY SSF55874 337 520 6.68E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 Gene3D G3DSA:1.20.120.160 6 145 4.6E-40 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 476 1.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 438 1.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 519 1.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 500 1.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 SMART SM00260 514 650 3.0E-32 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 SMART SM00387 379 522 9.5E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_0847 5faab260aae0ecdd4dd3e8411bd87626 662 Pfam PF01584 CheW-like domain 528 652 2.9E-24 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Theam_0494 092e53383c6eac1041f209d12b25799e 466 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 459 2.6E-166 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Theam_0494 092e53383c6eac1041f209d12b25799e 466 PIRSF PIRSF006446 1 466 2.6E-147 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Theam_0779 881ffacb7a430c489627465d68443386 237 SUPERFAMILY SSF48695 57 198 3.45E-9 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_0258 2ff89fe72568de0790291dddd24e4fb4 208 Pfam PF00573 Ribosomal protein L4/L1 family 16 206 4.5E-72 T 13-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Theam_0258 2ff89fe72568de0790291dddd24e4fb4 208 Gene3D G3DSA:3.40.1370.10 2 208 1.3E-81 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Theam_0258 2ff89fe72568de0790291dddd24e4fb4 208 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 205 1.2E-77 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0258 2ff89fe72568de0790291dddd24e4fb4 208 SUPERFAMILY SSF52166 1 207 1.96E-80 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Theam_0258 2ff89fe72568de0790291dddd24e4fb4 208 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 208 35.61 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0678 081cf42ddc3c0fd5a5b196ab44e08384 395 SUPERFAMILY SSF53383 1 391 1.73E-127 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Theam_0678 081cf42ddc3c0fd5a5b196ab44e08384 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 197 220 4.6E-12 T 13-10-2018 Theam_0678 081cf42ddc3c0fd5a5b196ab44e08384 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 161 185 4.6E-12 T 13-10-2018 Theam_0678 081cf42ddc3c0fd5a5b196ab44e08384 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 92 112 4.6E-12 T 13-10-2018 Theam_0678 081cf42ddc3c0fd5a5b196ab44e08384 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 228 252 4.6E-12 T 13-10-2018 Theam_0678 081cf42ddc3c0fd5a5b196ab44e08384 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 114 135 4.6E-12 T 13-10-2018 Theam_0678 081cf42ddc3c0fd5a5b196ab44e08384 395 Gene3D G3DSA:3.90.1150.10 25 384 7.2E-146 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Theam_0678 081cf42ddc3c0fd5a5b196ab44e08384 395 Gene3D G3DSA:3.40.640.10 62 284 7.2E-146 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Theam_0678 081cf42ddc3c0fd5a5b196ab44e08384 395 Pfam PF00155 Aminotransferase class I and II 31 384 3.1E-78 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Theam_0312 6c73c822d5c44ec23f97b20f9be2361c 164 Pfam PF07273 Protein of unknown function (DUF1439) 26 157 2.3E-13 T 13-10-2018 IPR010835 Protein of unknown function DUF1439 Theam_0312 6c73c822d5c44ec23f97b20f9be2361c 164 Gene3D G3DSA:3.15.10.40 15 163 7.4E-9 T 13-10-2018 Theam_0569 e552c4b18b6e29e8732869b960a6d95e 363 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 64 359 4.3E-111 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Theam_0569 e552c4b18b6e29e8732869b960a6d95e 363 SUPERFAMILY SSF69055 271 360 3.27E-31 T 13-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Theam_0569 e552c4b18b6e29e8732869b960a6d95e 363 SUPERFAMILY SSF51735 5 129 8.2E-30 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0569 e552c4b18b6e29e8732869b960a6d95e 363 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 125 206 1.7E-39 T 13-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Theam_0569 e552c4b18b6e29e8732869b960a6d95e 363 PIRSF PIRSF006205 4 362 6.5E-139 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Theam_0569 e552c4b18b6e29e8732869b960a6d95e 363 SUPERFAMILY SSF55347 109 241 8.17E-55 T 13-10-2018 Theam_0569 e552c4b18b6e29e8732869b960a6d95e 363 Pfam PF13288 DXP reductoisomerase C-terminal domain 238 354 6.9E-41 T 13-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Theam_0569 e552c4b18b6e29e8732869b960a6d95e 363 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 7 359 43.877 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Theam_0569 e552c4b18b6e29e8732869b960a6d95e 363 Gene3D G3DSA:1.10.1740.10 279 363 1.2E-30 T 13-10-2018 Theam_0569 e552c4b18b6e29e8732869b960a6d95e 363 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 74 2.4E-16 T 13-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Theam_0569 e552c4b18b6e29e8732869b960a6d95e 363 Gene3D G3DSA:3.40.50.720 3 129 1.5E-34 T 13-10-2018 Theam_0523 8a5c74850ca86ea7d34e8a2d0c63db80 75 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 58 7.2E-25 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0523 8a5c74850ca86ea7d34e8a2d0c63db80 75 Gene3D G3DSA:1.20.5.1150 16 54 2.4E-17 T 13-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0523 8a5c74850ca86ea7d34e8a2d0c63db80 75 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 13-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0523 8a5c74850ca86ea7d34e8a2d0c63db80 75 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 3.0E-13 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0523 8a5c74850ca86ea7d34e8a2d0c63db80 75 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 3.0E-13 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0523 8a5c74850ca86ea7d34e8a2d0c63db80 75 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 3.0E-13 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0523 8a5c74850ca86ea7d34e8a2d0c63db80 75 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 3.0E-13 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0523 8a5c74850ca86ea7d34e8a2d0c63db80 75 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 43 1.0E-5 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0523 8a5c74850ca86ea7d34e8a2d0c63db80 75 Pfam PF01165 Ribosomal protein S21 3 56 2.5E-25 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0523 8a5c74850ca86ea7d34e8a2d0c63db80 75 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 25.294 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 Gene3D G3DSA:3.10.580.10 295 440 2.2E-27 T 13-10-2018 Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 SUPERFAMILY SSF81891 606 871 2.62E-38 T 13-10-2018 Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 SMART SM00116 379 426 1.6E-4 T 13-10-2018 IPR000644 CBS domain Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 SMART SM00116 316 364 5.1E-9 T 13-10-2018 IPR000644 CBS domain Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 Gene3D G3DSA:3.90.1640.10 2 193 3.3E-30 T 13-10-2018 Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 Gene3D G3DSA:1.10.3090.10 603 870 2.5E-71 T 13-10-2018 Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 Pfam PF02272 DHHA1 domain 169 299 1.3E-10 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 SUPERFAMILY SSF81301 469 604 9.81E-34 T 13-10-2018 Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 Pfam PF01743 Poly A polymerase head domain 480 607 4.8E-29 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 SUPERFAMILY SSF64182 3 294 1.07E-48 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 Pfam PF00571 CBS domain 372 425 1.4E-9 T 13-10-2018 IPR000644 CBS domain Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 Pfam PF00571 CBS domain 309 356 7.0E-11 T 13-10-2018 IPR000644 CBS domain Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 Pfam PF01368 DHH family 4 144 1.8E-7 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 Gene3D G3DSA:3.30.460.10 445 602 3.7E-50 T 13-10-2018 Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 SUPERFAMILY SSF54631 307 428 5.18E-30 T 13-10-2018 Theam_0894 41af75ef67648432c74a944cf0f2bab0 881 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 635 693 4.0E-7 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Theam_1093 d1a6993ecd97bb6d5c46adbfb7624ef4 502 PIRSF PIRSF002869 1 502 3.6E-137 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Theam_1093 d1a6993ecd97bb6d5c46adbfb7624ef4 502 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 466 18.545 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Theam_1093 d1a6993ecd97bb6d5c46adbfb7624ef4 502 Pfam PF03023 MviN-like protein 30 454 7.2E-118 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Theam_1093 d1a6993ecd97bb6d5c46adbfb7624ef4 502 PRINTS PR01806 Virulence factor MviN signature 403 420 3.9E-62 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Theam_1093 d1a6993ecd97bb6d5c46adbfb7624ef4 502 PRINTS PR01806 Virulence factor MviN signature 132 156 3.9E-62 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Theam_1093 d1a6993ecd97bb6d5c46adbfb7624ef4 502 PRINTS PR01806 Virulence factor MviN signature 156 177 3.9E-62 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Theam_1093 d1a6993ecd97bb6d5c46adbfb7624ef4 502 PRINTS PR01806 Virulence factor MviN signature 255 281 3.9E-62 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Theam_1093 d1a6993ecd97bb6d5c46adbfb7624ef4 502 PRINTS PR01806 Virulence factor MviN signature 54 70 3.9E-62 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Theam_1093 d1a6993ecd97bb6d5c46adbfb7624ef4 502 PRINTS PR01806 Virulence factor MviN signature 35 54 3.9E-62 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Theam_1093 d1a6993ecd97bb6d5c46adbfb7624ef4 502 PRINTS PR01806 Virulence factor MviN signature 349 368 3.9E-62 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Theam_1093 d1a6993ecd97bb6d5c46adbfb7624ef4 502 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 498 7.8E-128 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Theam_0716 23e795aefa319f2baa12bc1d6f1e6fbc 513 Gene3D G3DSA:3.40.50.10640 3 260 1.0E-52 T 13-10-2018 Theam_0716 23e795aefa319f2baa12bc1d6f1e6fbc 513 TIGRFAM TIGR01897 cas_MJ1666: CRISPR-associated protein, MJ1666 family 5 283 8.6E-33 T 13-10-2018 IPR010171 CRISPR-associated protein, MJ1666 Theam_0716 23e795aefa319f2baa12bc1d6f1e6fbc 513 Pfam PF09455 CRISPR-associated (Cas) DxTHG family 8 213 1.1E-15 T 13-10-2018 IPR019016 CRISPR-associated DxTHG protein Theam_0716 23e795aefa319f2baa12bc1d6f1e6fbc 513 SUPERFAMILY SSF160980 5 497 2.75E-49 T 13-10-2018 Theam_0716 23e795aefa319f2baa12bc1d6f1e6fbc 513 TIGRFAM TIGR02549 CRISPR_DxTHG: CRISPR-associated DxTHG motif protein 167 187 3.6E-7 T 13-10-2018 IPR013383 CRISPR-associated protein DxTHG, conserved site Theam_1534 abcd3288241fb2ff1ccec6182402c247 109 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 9 109 12.331 T 13-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Theam_1534 abcd3288241fb2ff1ccec6182402c247 109 SUPERFAMILY SSF143430 10 98 2.09E-16 T 13-10-2018 Theam_1534 abcd3288241fb2ff1ccec6182402c247 109 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 23 95 2.0E-10 T 13-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Theam_1534 abcd3288241fb2ff1ccec6182402c247 109 Gene3D G3DSA:3.30.70.240 5 108 5.3E-17 T 13-10-2018 Theam_1534 abcd3288241fb2ff1ccec6182402c247 109 Pfam PF09827 CRISPR associated protein Cas2 11 93 8.2E-16 T 13-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Theam_0124 428d5ed908f286dc9b7170fcb2574d60 814 Pfam PF04055 Radical SAM superfamily 254 417 3.3E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0124 428d5ed908f286dc9b7170fcb2574d60 814 SMART SM00729 249 466 3.4E-21 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_0124 428d5ed908f286dc9b7170fcb2574d60 814 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 623 788 6.9E-32 T 13-10-2018 IPR018768 Domain of unknown function DUF2344 Theam_0124 428d5ed908f286dc9b7170fcb2574d60 814 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 623 812 2.2E-37 T 13-10-2018 IPR018768 Domain of unknown function DUF2344 Theam_0124 428d5ed908f286dc9b7170fcb2574d60 814 Gene3D G3DSA:3.80.30.20 247 476 1.9E-17 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Theam_0124 428d5ed908f286dc9b7170fcb2574d60 814 SUPERFAMILY SSF102114 232 574 5.89E-31 T 13-10-2018 Theam_0953 aa045d2b05179482ef2fa57f07ee861c 337 Pfam PF08735 Putative pyruvate format-lyase activating enzyme (DUF1786) 58 303 1.0E-72 T 13-10-2018 IPR014846 Protein of unknown function DUF1786, putative pyruvate format-lyase activating enzyme Theam_0168 746d0dcb42145a8e209cb39c72a11554 244 Pfam PF00977 Histidine biosynthesis protein 3 229 2.6E-78 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Theam_0168 746d0dcb42145a8e209cb39c72a11554 244 SUPERFAMILY SSF51366 2 236 1.1E-72 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Theam_0168 746d0dcb42145a8e209cb39c72a11554 244 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 4 234 1.2E-83 T 13-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Theam_0168 746d0dcb42145a8e209cb39c72a11554 244 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 3 237 36.435 T 13-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Theam_0168 746d0dcb42145a8e209cb39c72a11554 244 Gene3D G3DSA:3.20.20.70 1 242 3.5E-88 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 SUPERFAMILY SSF47323 652 928 8.04E-76 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 Pfam PF06827 Zinc finger found in FPG and IleRS 895 922 2.7E-8 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 Gene3D G3DSA:1.10.730.20 640 928 3.0E-99 T 13-10-2018 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 SUPERFAMILY SSF52374 5 648 3.43E-149 T 13-10-2018 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 17 839 1.7E-294 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 5.8E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 527 540 5.8E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 53 64 5.8E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 232 255 5.8E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 394 409 5.8E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 30 641 1.3E-212 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 Pfam PF08264 Anticodon-binding domain of tRNA 684 836 2.9E-31 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 Gene3D G3DSA:3.40.50.620 27 629 8.7E-259 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 4 926 21.092 T 13-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 Gene3D G3DSA:3.90.740.10 197 401 8.7E-259 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 60 71 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_0642 3542dc56c77ef3f8ff18aed3828fccf4 936 SUPERFAMILY SSF50677 206 396 4.71E-56 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 231 263 - T 13-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 429 41.829 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 PIRSF PIRSF000099 1 431 1.8E-168 T 13-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 SUPERFAMILY SSF53720 29 428 3.14E-84 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 Gene3D G3DSA:3.40.50.1980 235 351 1.5E-126 T 13-10-2018 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 PRINTS PR00083 Histidinol dehydrogenase signature 253 272 8.4E-86 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 8.4E-86 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 PRINTS PR00083 Histidinol dehydrogenase signature 202 227 8.4E-86 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 PRINTS PR00083 Histidinol dehydrogenase signature 322 347 8.4E-86 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 PRINTS PR00083 Histidinol dehydrogenase signature 363 381 8.4E-86 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 PRINTS PR00083 Histidinol dehydrogenase signature 231 252 8.4E-86 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 PRINTS PR00083 Histidinol dehydrogenase signature 35 59 8.4E-86 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 PRINTS PR00083 Histidinol dehydrogenase signature 172 198 8.4E-86 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 35 428 3.0E-164 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 Pfam PF00815 Histidinol dehydrogenase 28 428 3.3E-170 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Theam_1327 c58ba7e08cb2d7020b9ee08579123949 443 Gene3D G3DSA:3.40.50.1980 34 233 1.5E-126 T 13-10-2018 Theam_0734 afabd6926828d6ed46f4abd7706b5fa0 394 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 394 50.305 T 13-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0734 afabd6926828d6ed46f4abd7706b5fa0 394 SUPERFAMILY SSF56762 18 394 5.1E-140 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0734 afabd6926828d6ed46f4abd7706b5fa0 394 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 9 394 3.8E-174 T 13-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0734 afabd6926828d6ed46f4abd7706b5fa0 394 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 45 56 - T 13-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0734 afabd6926828d6ed46f4abd7706b5fa0 394 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 125 394 5.9E-120 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0734 afabd6926828d6ed46f4abd7706b5fa0 394 Gene3D G3DSA:1.10.645.20 9 394 1.8E-175 T 13-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0582 c358c793376717aa106ad88b13a42d8a 716 SUPERFAMILY SSF50249 132 230 2.48E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0582 c358c793376717aa106ad88b13a42d8a 716 Pfam PF00773 RNB domain 253 581 4.2E-119 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Theam_0582 c358c793376717aa106ad88b13a42d8a 716 SUPERFAMILY SSF50249 214 626 1.31E-152 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0582 c358c793376717aa106ad88b13a42d8a 716 ProSitePatterns PS01175 Ribonuclease II family signature. 549 573 - T 13-10-2018 IPR022966 Ribonuclease II/R, conserved site Theam_0582 c358c793376717aa106ad88b13a42d8a 716 SMART SM00955 253 582 4.4E-181 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Theam_0582 c358c793376717aa106ad88b13a42d8a 716 SUPERFAMILY SSF50249 62 141 2.63E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0582 c358c793376717aa106ad88b13a42d8a 716 TIGRFAM TIGR02063 RNase_R: ribonuclease R 15 712 3.2E-255 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Theam_0582 c358c793376717aa106ad88b13a42d8a 716 Gene3D G3DSA:2.40.50.140 141 208 2.2E-5 T 13-10-2018 Theam_0582 c358c793376717aa106ad88b13a42d8a 716 Gene3D G3DSA:2.40.50.140 63 140 6.5E-17 T 13-10-2018 Theam_0582 c358c793376717aa106ad88b13a42d8a 716 SMART SM00357 80 139 1.4E-9 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Theam_0582 c358c793376717aa106ad88b13a42d8a 716 SMART SM00357 147 208 0.22 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Theam_0582 c358c793376717aa106ad88b13a42d8a 716 SMART SM00316 629 712 1.8E-11 T 13-10-2018 IPR022967 RNA-binding domain, S1 Theam_0582 c358c793376717aa106ad88b13a42d8a 716 Pfam PF00575 S1 RNA binding domain 630 710 9.7E-12 T 13-10-2018 IPR003029 S1 domain GO:0003676 Theam_0582 c358c793376717aa106ad88b13a42d8a 716 Gene3D G3DSA:2.40.50.140 632 716 6.1E-17 T 13-10-2018 Theam_0582 c358c793376717aa106ad88b13a42d8a 716 SUPERFAMILY SSF50249 629 707 1.72E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0582 c358c793376717aa106ad88b13a42d8a 716 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 69 712 2.1E-200 T 13-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Theam_0582 c358c793376717aa106ad88b13a42d8a 716 Hamap MF_01895 Ribonuclease R [rnr]. 32 712 58.783 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Theam_0582 c358c793376717aa106ad88b13a42d8a 716 Pfam PF08206 Ribonuclease B OB domain 81 138 2.1E-14 T 13-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Theam_0979 bf6b5b64fb87d8e28355a008953afb36 344 Gene3D G3DSA:3.30.428.10 41 176 5.2E-114 T 13-10-2018 IPR036265 HIT-like superfamily Theam_0979 bf6b5b64fb87d8e28355a008953afb36 344 Gene3D G3DSA:3.30.428.10 3 340 5.2E-114 T 13-10-2018 IPR036265 HIT-like superfamily Theam_0979 bf6b5b64fb87d8e28355a008953afb36 344 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 185 291 4.9E-8 T 13-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Theam_0979 bf6b5b64fb87d8e28355a008953afb36 344 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 2 177 1.1E-12 T 13-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Theam_0979 bf6b5b64fb87d8e28355a008953afb36 344 PIRSF PIRSF000808 1 344 9.0E-96 T 13-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Theam_0979 bf6b5b64fb87d8e28355a008953afb36 344 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 290 1.5E-31 T 13-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Theam_0979 bf6b5b64fb87d8e28355a008953afb36 344 SUPERFAMILY SSF54197 1 177 5.86E-45 T 13-10-2018 IPR036265 HIT-like superfamily Theam_0979 bf6b5b64fb87d8e28355a008953afb36 344 SUPERFAMILY SSF54197 182 342 6.5E-32 T 13-10-2018 IPR036265 HIT-like superfamily Theam_0852 0fb71d42fb66d266f6899e0db8c55acb 292 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 292 34.936 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0852 0fb71d42fb66d266f6899e0db8c55acb 292 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 2 290 7.1E-94 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0852 0fb71d42fb66d266f6899e0db8c55acb 292 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 236 264 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0852 0fb71d42fb66d266f6899e0db8c55acb 292 Gene3D G3DSA:3.30.470.20 83 288 3.5E-75 T 13-10-2018 Theam_0852 0fb71d42fb66d266f6899e0db8c55acb 292 SUPERFAMILY SSF52440 2 94 6.04E-29 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Theam_0852 0fb71d42fb66d266f6899e0db8c55acb 292 Pfam PF01820 D-ala D-ala ligase N-terminus 2 84 9.2E-19 T 13-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0852 0fb71d42fb66d266f6899e0db8c55acb 292 PIRSF PIRSF039102 1 53 3.8E-7 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0852 0fb71d42fb66d266f6899e0db8c55acb 292 PIRSF PIRSF039102 45 292 8.2E-86 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0852 0fb71d42fb66d266f6899e0db8c55acb 292 Pfam PF07478 D-ala D-ala ligase C-terminus 120 290 7.6E-58 T 13-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0852 0fb71d42fb66d266f6899e0db8c55acb 292 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 61 72 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Theam_0852 0fb71d42fb66d266f6899e0db8c55acb 292 Gene3D G3DSA:3.40.50.20 1 82 2.4E-25 T 13-10-2018 Theam_0852 0fb71d42fb66d266f6899e0db8c55acb 292 SUPERFAMILY SSF56059 94 289 2.02E-54 T 13-10-2018 Theam_0852 0fb71d42fb66d266f6899e0db8c55acb 292 Gene3D G3DSA:3.30.1490.20 109 171 3.5E-75 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Theam_0984 bdfb4c0682b5ceefe085af9947c51028 306 Gene3D G3DSA:3.30.70.250 124 195 6.5E-100 T 13-10-2018 Theam_0984 bdfb4c0682b5ceefe085af9947c51028 306 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 289 6.4E-103 T 13-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Theam_0984 bdfb4c0682b5ceefe085af9947c51028 306 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 300 2.3E-51 T 13-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Theam_0984 bdfb4c0682b5ceefe085af9947c51028 306 SUPERFAMILY SSF52151 3 304 1.99E-76 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Theam_0984 bdfb4c0682b5ceefe085af9947c51028 306 Pfam PF00698 Acyl transferase domain 5 281 7.4E-39 T 13-10-2018 IPR014043 Acyl transferase Theam_0984 bdfb4c0682b5ceefe085af9947c51028 306 PIRSF PIRSF000446 1 306 6.9E-102 T 13-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Theam_0984 bdfb4c0682b5ceefe085af9947c51028 306 Gene3D G3DSA:3.40.366.10 5 284 6.5E-100 T 13-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Theam_0984 bdfb4c0682b5ceefe085af9947c51028 306 SUPERFAMILY SSF55048 129 195 1.96E-17 T 13-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Theam_0002 252db8840b0ed9701bc8d0ac7512d78c 484 SUPERFAMILY SSF52540 179 430 5.61E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0002 252db8840b0ed9701bc8d0ac7512d78c 484 SUPERFAMILY SSF48024 6 116 2.88E-17 T 13-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Theam_0002 252db8840b0ed9701bc8d0ac7512d78c 484 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 7 439 6.3E-160 T 13-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Theam_0002 252db8840b0ed9701bc8d0ac7512d78c 484 SMART SM00382 198 395 7.1E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0002 252db8840b0ed9701bc8d0ac7512d78c 484 Gene3D G3DSA:1.10.860.10 5 162 2.5E-29 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Theam_0002 252db8840b0ed9701bc8d0ac7512d78c 484 Pfam PF00772 DnaB-like helicase N terminal domain 6 104 3.1E-16 T 13-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Theam_0002 252db8840b0ed9701bc8d0ac7512d78c 484 Pfam PF03796 DnaB-like helicase C terminal domain 181 437 6.7E-115 T 13-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Theam_0002 252db8840b0ed9701bc8d0ac7512d78c 484 Gene3D G3DSA:3.40.50.300 164 447 3.2E-110 T 13-10-2018 Theam_0337 225e644704427e9070fc2a19e16b6967 480 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 22 480 1.7E-190 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Theam_0337 225e644704427e9070fc2a19e16b6967 480 Pfam PF07724 AAA domain (Cdc48 subfamily) 236 366 8.3E-39 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Theam_0337 225e644704427e9070fc2a19e16b6967 480 Gene3D G3DSA:1.10.8.60 372 477 2.7E-43 T 13-10-2018 Theam_0337 225e644704427e9070fc2a19e16b6967 480 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 19 480 43.266 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Theam_0337 225e644704427e9070fc2a19e16b6967 480 SUPERFAMILY SSF52540 21 475 3.46E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0337 225e644704427e9070fc2a19e16b6967 480 SMART SM00382 67 373 1.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0337 225e644704427e9070fc2a19e16b6967 480 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 71 119 4.5E-6 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Theam_0337 225e644704427e9070fc2a19e16b6967 480 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 372 442 1.1E-7 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Theam_0337 225e644704427e9070fc2a19e16b6967 480 SMART SM01086 372 468 1.1E-25 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Theam_0563 31202834853cf89fa79705cee02b58fd 290 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 273 9.5E-37 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Theam_1337 d1c8132cba48f9a88bdfee6a513a97ef 651 Gene3D G3DSA:3.40.50.2030 259 434 1.9E-51 T 13-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Theam_1337 d1c8132cba48f9a88bdfee6a513a97ef 651 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 34 651 2.0E-237 T 13-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Theam_1337 d1c8132cba48f9a88bdfee6a513a97ef 651 Gene3D G3DSA:1.20.1270.30 86 258 8.4E-45 T 13-10-2018 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Theam_1337 d1c8132cba48f9a88bdfee6a513a97ef 651 Gene3D G3DSA:3.40.50.2030 435 647 5.0E-77 T 13-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Theam_1337 d1c8132cba48f9a88bdfee6a513a97ef 651 Pfam PF03063 Prismane/CO dehydrogenase family 73 631 5.4E-136 T 13-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Theam_1337 d1c8132cba48f9a88bdfee6a513a97ef 651 SUPERFAMILY SSF56821 28 651 1.03E-172 T 13-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Theam_1337 d1c8132cba48f9a88bdfee6a513a97ef 651 PIRSF PIRSF005023 22 651 4.1E-236 T 13-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Theam_1444 d90eefb2c296e0d008ad47a1cabbc9b2 83 Gene3D G3DSA:2.30.330.10 2 83 2.6E-19 T 13-10-2018 IPR036429 SpoA-like superfamily Theam_1444 d90eefb2c296e0d008ad47a1cabbc9b2 83 SUPERFAMILY SSF101801 11 82 8.89E-17 T 13-10-2018 IPR036429 SpoA-like superfamily Theam_1444 d90eefb2c296e0d008ad47a1cabbc9b2 83 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 13 82 8.1E-19 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) Theam_1444 d90eefb2c296e0d008ad47a1cabbc9b2 83 PRINTS PR00956 Flagellar motor switch protein FliN signature 46 59 3.3E-12 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Theam_1444 d90eefb2c296e0d008ad47a1cabbc9b2 83 PRINTS PR00956 Flagellar motor switch protein FliN signature 13 29 3.3E-12 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Theam_1444 d90eefb2c296e0d008ad47a1cabbc9b2 83 PRINTS PR00956 Flagellar motor switch protein FliN signature 30 46 3.3E-12 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Theam_1444 d90eefb2c296e0d008ad47a1cabbc9b2 83 PRINTS PR00956 Flagellar motor switch protein FliN signature 59 74 3.3E-12 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Theam_0812 0fa6232451537dba451acba5f0532e03 720 Gene3D G3DSA:3.40.50.300 75 503 3.7E-92 T 13-10-2018 Theam_0812 0fa6232451537dba451acba5f0532e03 720 Pfam PF13086 AAA domain 240 490 2.9E-48 T 13-10-2018 Theam_0812 0fa6232451537dba451acba5f0532e03 720 TIGRFAM TIGR00376 TIGR00376: putative DNA helicase 80 719 1.1E-240 T 13-10-2018 IPR004483 Helicase SMUBP-2/Hcs1-like GO:0003677|GO:0005524 Theam_0812 0fa6232451537dba451acba5f0532e03 720 Pfam PF13087 AAA domain 495 695 2.4E-62 T 13-10-2018 Theam_0812 0fa6232451537dba451acba5f0532e03 720 Gene3D G3DSA:2.40.30.270 93 189 3.7E-92 T 13-10-2018 Theam_0812 0fa6232451537dba451acba5f0532e03 720 SUPERFAMILY SSF52540 232 705 1.42E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0812 0fa6232451537dba451acba5f0532e03 720 Gene3D G3DSA:3.40.50.300 518 720 1.9E-65 T 13-10-2018 Theam_1614 cec59c93ba96dee114d38e2312bf49d4 270 Gene3D G3DSA:3.30.70.1890 1 127 2.8E-8 T 13-10-2018 Theam_1614 cec59c93ba96dee114d38e2312bf49d4 270 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 39 267 3.9E-25 T 13-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Theam_1614 cec59c93ba96dee114d38e2312bf49d4 270 Pfam PF01881 CRISPR associated protein Cas6 122 268 3.6E-26 T 13-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Theam_1614 cec59c93ba96dee114d38e2312bf49d4 270 Gene3D G3DSA:3.30.70.1900 150 270 4.0E-14 T 13-10-2018 Theam_0788 c307ded310ebcec2d5444a4b1fec88b0 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 215 3.9E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Theam_0788 c307ded310ebcec2d5444a4b1fec88b0 225 SUPERFAMILY SSF161098 4 218 3.53E-48 T 13-10-2018 IPR035906 MetI-like superfamily Theam_0788 c307ded310ebcec2d5444a4b1fec88b0 225 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 13 220 4.2E-71 T 13-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 Theam_0788 c307ded310ebcec2d5444a4b1fec88b0 225 Gene3D G3DSA:1.10.3720.10 2 224 2.5E-57 T 13-10-2018 IPR035906 MetI-like superfamily Theam_0605 d399c6908cb5a4a2ef2e5328233d327e 356 PIRSF PIRSF004640 1 356 3.2E-147 T 13-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Theam_0605 d399c6908cb5a4a2ef2e5328233d327e 356 Pfam PF04551 GcpE protein 9 351 1.1E-135 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Theam_0605 d399c6908cb5a4a2ef2e5328233d327e 356 Gene3D G3DSA:3.20.20.20 1 258 8.4E-107 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Theam_0605 d399c6908cb5a4a2ef2e5328233d327e 356 SUPERFAMILY SSF51717 13 213 1.88E-11 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Theam_0605 d399c6908cb5a4a2ef2e5328233d327e 356 SUPERFAMILY SSF56014 263 348 4.32E-15 T 13-10-2018 Theam_0605 d399c6908cb5a4a2ef2e5328233d327e 356 Gene3D G3DSA:3.30.413.10 259 356 6.1E-36 T 13-10-2018 Theam_0605 d399c6908cb5a4a2ef2e5328233d327e 356 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 6 349 1.6E-134 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Theam_0605 d399c6908cb5a4a2ef2e5328233d327e 356 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 4 354 35.274 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Theam_1265 163e6eae661046804e8711dac54954dc 531 Gene3D G3DSA:3.40.50.12780 2 296 2.0E-57 T 13-10-2018 Theam_1265 163e6eae661046804e8711dac54954dc 531 Gene3D G3DSA:3.30.300.30 421 528 8.6E-9 T 13-10-2018 Theam_1265 163e6eae661046804e8711dac54954dc 531 Gene3D G3DSA:3.40.50.12780 297 420 3.4E-41 T 13-10-2018 Theam_1265 163e6eae661046804e8711dac54954dc 531 ProSitePatterns PS00455 Putative AMP-binding domain signature. 155 166 - T 13-10-2018 IPR020845 AMP-binding, conserved site Theam_1265 163e6eae661046804e8711dac54954dc 531 SUPERFAMILY SSF56801 4 526 1.57E-122 T 13-10-2018 Theam_1265 163e6eae661046804e8711dac54954dc 531 PRINTS PR00154 AMP-binding signature 150 161 3.2E-5 T 13-10-2018 IPR020459 AMP-binding Theam_1265 163e6eae661046804e8711dac54954dc 531 PRINTS PR00154 AMP-binding signature 162 170 3.2E-5 T 13-10-2018 IPR020459 AMP-binding Theam_1265 163e6eae661046804e8711dac54954dc 531 Pfam PF00501 AMP-binding enzyme 10 424 2.2E-97 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Theam_1405 073b25bf53eeb8c0c7366e11e2d06086 409 Pfam PF02754 Cysteine-rich domain 299 384 5.7E-15 T 13-10-2018 IPR004017 Cysteine-rich domain Theam_1405 073b25bf53eeb8c0c7366e11e2d06086 409 Pfam PF02754 Cysteine-rich domain 182 263 4.2E-19 T 13-10-2018 IPR004017 Cysteine-rich domain Theam_1405 073b25bf53eeb8c0c7366e11e2d06086 409 SUPERFAMILY SSF46548 14 97 1.05E-17 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Theam_1405 073b25bf53eeb8c0c7366e11e2d06086 409 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 68 79 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_1405 073b25bf53eeb8c0c7366e11e2d06086 409 Pfam PF13183 4Fe-4S dicluster domain 15 80 1.8E-11 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_1405 073b25bf53eeb8c0c7366e11e2d06086 409 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 17 28 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_1405 073b25bf53eeb8c0c7366e11e2d06086 409 PIRSF PIRSF000139 1 409 5.3E-87 T 13-10-2018 Theam_1405 073b25bf53eeb8c0c7366e11e2d06086 409 Gene3D G3DSA:1.10.1060.10 3 104 3.7E-9 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Theam_0196 50386447c04fa266d3859324fed76d1a 256 Pfam PF13460 NAD(P)H-binding 9 146 1.4E-12 T 13-10-2018 IPR016040 NAD(P)-binding domain Theam_0196 50386447c04fa266d3859324fed76d1a 256 Gene3D G3DSA:3.40.50.720 4 239 9.3E-37 T 13-10-2018 Theam_0196 50386447c04fa266d3859324fed76d1a 256 SUPERFAMILY SSF51735 4 236 3.06E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0802 4aceb2b1b021295f6c4d298537f6d31b 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 244 1.8E-65 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Theam_0802 4aceb2b1b021295f6c4d298537f6d31b 314 Gene3D G3DSA:3.40.50.720 4 297 9.7E-103 T 13-10-2018 Theam_0802 4aceb2b1b021295f6c4d298537f6d31b 314 SUPERFAMILY SSF51735 1 308 4.38E-94 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0802 4aceb2b1b021295f6c4d298537f6d31b 314 Gene3D G3DSA:3.90.25.10 171 307 9.7E-103 T 13-10-2018 Theam_0802 4aceb2b1b021295f6c4d298537f6d31b 314 PRINTS PR01713 Nucleotide sugar epimerase signature 238 253 7.3E-5 T 13-10-2018 Theam_0802 4aceb2b1b021295f6c4d298537f6d31b 314 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 7.3E-5 T 13-10-2018 Theam_0802 4aceb2b1b021295f6c4d298537f6d31b 314 PRINTS PR01713 Nucleotide sugar epimerase signature 277 294 7.3E-5 T 13-10-2018 Theam_1000 fb018877c13d9549748e367c85237f64 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 287 9.7E-65 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Theam_1000 fb018877c13d9549748e367c85237f64 429 SUPERFAMILY SSF51905 107 309 6.22E-42 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1000 fb018877c13d9549748e367c85237f64 429 SUPERFAMILY SSF51905 2 126 8.63E-18 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1000 fb018877c13d9549748e367c85237f64 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 4.0E-15 T 13-10-2018 Theam_1000 fb018877c13d9549748e367c85237f64 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 21 4.0E-15 T 13-10-2018 Theam_1000 fb018877c13d9549748e367c85237f64 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 229 243 4.0E-15 T 13-10-2018 Theam_1000 fb018877c13d9549748e367c85237f64 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 275 4.0E-15 T 13-10-2018 Theam_1000 fb018877c13d9549748e367c85237f64 429 Gene3D G3DSA:3.50.50.60 2 308 1.8E-95 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1000 fb018877c13d9549748e367c85237f64 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.4E-23 T 13-10-2018 Theam_1000 fb018877c13d9549748e367c85237f64 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 1.4E-23 T 13-10-2018 Theam_1000 fb018877c13d9549748e367c85237f64 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 1.4E-23 T 13-10-2018 Theam_1000 fb018877c13d9549748e367c85237f64 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 96 114 1.4E-23 T 13-10-2018 Theam_1000 fb018877c13d9549748e367c85237f64 429 Gene3D G3DSA:3.50.50.60 36 237 1.8E-95 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1032 0972ba56ed277a0e2119c3da3c67bac5 415 Pfam PF00860 Permease family 9 375 4.3E-52 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Theam_1032 0972ba56ed277a0e2119c3da3c67bac5 415 PIRSF PIRSF005353 2 415 1.1E-156 T 13-10-2018 IPR026033 Purine permease PbuG-like Theam_1512 1bf32552d4111bacb80510838a426197 190 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 180 2.1E-38 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Theam_1512 1bf32552d4111bacb80510838a426197 190 Pfam PF07499 RuvA, C-terminal domain 146 181 1.8E-7 T 13-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 Theam_1512 1bf32552d4111bacb80510838a426197 190 Gene3D G3DSA:1.10.150.20 67 133 6.4E-22 T 13-10-2018 Theam_1512 1bf32552d4111bacb80510838a426197 190 SUPERFAMILY SSF47781 65 134 4.45E-19 T 13-10-2018 IPR010994 RuvA domain 2-like Theam_1512 1bf32552d4111bacb80510838a426197 190 Pfam PF14520 Helix-hairpin-helix domain 72 129 5.2E-13 T 13-10-2018 Theam_1512 1bf32552d4111bacb80510838a426197 190 Pfam PF01330 RuvA N terminal domain 1 62 1.8E-6 T 13-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Theam_1512 1bf32552d4111bacb80510838a426197 190 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 181 24.126 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Theam_1512 1bf32552d4111bacb80510838a426197 190 SMART SM00278 73 92 13.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Theam_1512 1bf32552d4111bacb80510838a426197 190 SMART SM00278 108 127 84.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Theam_1512 1bf32552d4111bacb80510838a426197 190 Gene3D G3DSA:2.40.50.140 1 64 1.5E-6 T 13-10-2018 Theam_1512 1bf32552d4111bacb80510838a426197 190 SUPERFAMILY SSF46929 137 180 4.45E-6 T 13-10-2018 IPR036267 RuvA, C-terminal domain superfamily Theam_0833 3e9f71eab95a65e27a7651fba5a54699 148 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 143 2.4E-55 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Theam_0833 3e9f71eab95a65e27a7651fba5a54699 148 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 33.549 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Theam_0833 3e9f71eab95a65e27a7651fba5a54699 148 Gene3D G3DSA:3.50.80.10 1 148 1.4E-57 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Theam_0833 3e9f71eab95a65e27a7651fba5a54699 148 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 3.2E-56 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Theam_0833 3e9f71eab95a65e27a7651fba5a54699 148 SUPERFAMILY SSF69500 1 143 1.7E-53 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Theam_0669 ec2a6da4c8c6ff6cc474560a33fb2c74 290 Pfam PF00535 Glycosyl transferase family 2 6 113 1.1E-15 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Theam_0669 ec2a6da4c8c6ff6cc474560a33fb2c74 290 Gene3D G3DSA:3.90.550.10 1 216 5.1E-32 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0669 ec2a6da4c8c6ff6cc474560a33fb2c74 290 SUPERFAMILY SSF53448 5 276 3.66E-34 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 Pfam PF13432 Tetratricopeptide repeat 23 58 2.4E-4 T 13-10-2018 Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 Pfam PF13432 Tetratricopeptide repeat 137 180 0.0053 T 13-10-2018 Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 SUPERFAMILY SSF81901 435 546 4.84E-12 T 13-10-2018 Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 SUPERFAMILY SSF81901 350 456 3.01E-11 T 13-10-2018 Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 SUPERFAMILY SSF81901 22 207 2.79E-18 T 13-10-2018 Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 SMART SM00671 421 452 10.0 T 13-10-2018 IPR006597 Sel1-like repeat Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 SMART SM00671 50 85 61.0 T 13-10-2018 IPR006597 Sel1-like repeat Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 SMART SM00671 150 181 33.0 T 13-10-2018 IPR006597 Sel1-like repeat Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 SMART SM00671 485 521 0.22 T 13-10-2018 IPR006597 Sel1-like repeat Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 SMART SM00671 86 117 38.0 T 13-10-2018 IPR006597 Sel1-like repeat Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 Gene3D G3DSA:1.25.40.10 352 558 1.3E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 Gene3D G3DSA:1.25.40.10 17 351 2.6E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 Pfam PF08238 Sel1 repeat 266 273 150.0 T 13-10-2018 IPR006597 Sel1-like repeat Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 Pfam PF08238 Sel1 repeat 487 520 0.29 T 13-10-2018 IPR006597 Sel1-like repeat Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 Pfam PF08238 Sel1 repeat 369 385 9.3 T 13-10-2018 IPR006597 Sel1-like repeat Theam_0791 f5f4be13e9ad6b5c700c46a48f750324 695 Pfam PF08238 Sel1 repeat 102 116 42.0 T 13-10-2018 IPR006597 Sel1-like repeat Theam_0414 42ad0845845d91718b9d1add8ecbd748 164 PIRSF PIRSF005028 1 162 3.2E-54 T 13-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT Theam_0414 42ad0845845d91718b9d1add8ecbd748 164 Gene3D G3DSA:3.30.70.1450 87 164 1.8E-24 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Theam_0414 42ad0845845d91718b9d1add8ecbd748 164 Pfam PF02080 TrkA-C domain 90 156 8.1E-19 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Theam_0414 42ad0845845d91718b9d1add8ecbd748 164 SUPERFAMILY SSF116726 86 156 1.57E-21 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Theam_0769 585cfbc2855cdab4768f7c0719d1e43e 838 Gene3D G3DSA:2.40.160.50 523 836 3.0E-61 T 13-10-2018 Theam_0769 585cfbc2855cdab4768f7c0719d1e43e 838 Gene3D G3DSA:3.10.20.310 433 520 2.5E-7 T 13-10-2018 Theam_0769 585cfbc2855cdab4768f7c0719d1e43e 838 Gene3D G3DSA:3.10.20.310 220 285 2.0E-8 T 13-10-2018 Theam_0769 585cfbc2855cdab4768f7c0719d1e43e 838 Pfam PF01103 Surface antigen 547 838 8.7E-45 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Theam_0769 585cfbc2855cdab4768f7c0719d1e43e 838 Pfam PF07244 Surface antigen variable number repeat 220 292 1.9E-8 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Theam_0769 585cfbc2855cdab4768f7c0719d1e43e 838 Gene3D G3DSA:3.10.20.310 286 367 5.3E-6 T 13-10-2018 Theam_1478 3ab476c386673d2aebaee1f4f5614be0 122 PIRSF PIRSF006246 1 119 4.9E-55 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Theam_1478 3ab476c386673d2aebaee1f4f5614be0 122 Gene3D G3DSA:2.40.40.20 1 118 1.1E-54 T 13-10-2018 Theam_1478 3ab476c386673d2aebaee1f4f5614be0 122 SUPERFAMILY SSF50692 1 114 1.74E-49 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Theam_1478 3ab476c386673d2aebaee1f4f5614be0 122 Pfam PF02261 Aspartate decarboxylase 1 109 4.5E-53 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Theam_1478 3ab476c386673d2aebaee1f4f5614be0 122 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 110 1.6E-49 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Theam_1478 3ab476c386673d2aebaee1f4f5614be0 122 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 122 69.958 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Theam_1478 3ab476c386673d2aebaee1f4f5614be0 122 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 1 98 1.0E-35 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Theam_1402 eb75f0e8599035c0f8fd077a78cd616d 227 SUPERFAMILY SSF52540 6 191 7.65E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1402 eb75f0e8599035c0f8fd077a78cd616d 227 Gene3D G3DSA:3.40.50.300 12 185 2.8E-76 T 13-10-2018 Theam_1402 eb75f0e8599035c0f8fd077a78cd616d 227 SMART SM00072 7 189 6.9E-80 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Theam_1402 eb75f0e8599035c0f8fd077a78cd616d 227 Hamap MF_00328 Guanylate kinase [gmk]. 6 189 39.309 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Theam_1402 eb75f0e8599035c0f8fd077a78cd616d 227 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 8 186 4.8E-79 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Theam_1402 eb75f0e8599035c0f8fd077a78cd616d 227 ProSitePatterns PS00856 Guanylate kinase-like signature. 42 59 - T 13-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 Theam_1402 eb75f0e8599035c0f8fd077a78cd616d 227 Pfam PF00625 Guanylate kinase 10 187 1.8E-56 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Theam_1402 eb75f0e8599035c0f8fd077a78cd616d 227 Gene3D G3DSA:3.30.63.10 39 98 2.8E-76 T 13-10-2018 Theam_1499 151e347a67618fbd10886da5d4306e53 259 Pfam PF00005 ABC transporter 28 184 3.0E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_1499 151e347a67618fbd10886da5d4306e53 259 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Theam_1499 151e347a67618fbd10886da5d4306e53 259 SUPERFAMILY SSF52540 13 242 1.14E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1499 151e347a67618fbd10886da5d4306e53 259 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 13 259 2.3E-121 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Theam_1499 151e347a67618fbd10886da5d4306e53 259 Gene3D G3DSA:3.40.50.300 12 257 8.4E-70 T 13-10-2018 Theam_1499 151e347a67618fbd10886da5d4306e53 259 SMART SM00382 37 247 1.9E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1166 38e2d7d7b86a54ac77e34f2c64088daa 371 Gene3D G3DSA:3.40.140.10 2 139 5.0E-48 T 13-10-2018 Theam_1166 38e2d7d7b86a54ac77e34f2c64088daa 371 Gene3D G3DSA:3.40.430.10 140 366 4.8E-63 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Theam_1166 38e2d7d7b86a54ac77e34f2c64088daa 371 PIRSF PIRSF006769 1 364 2.1E-119 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Theam_1166 38e2d7d7b86a54ac77e34f2c64088daa 371 Pfam PF01872 RibD C-terminal domain 147 333 3.1E-42 T 13-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Theam_1166 38e2d7d7b86a54ac77e34f2c64088daa 371 SUPERFAMILY SSF53597 144 361 1.96E-52 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Theam_1166 38e2d7d7b86a54ac77e34f2c64088daa 371 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 99 7.6E-23 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Theam_1166 38e2d7d7b86a54ac77e34f2c64088daa 371 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 359 4.6E-49 T 13-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 Theam_1166 38e2d7d7b86a54ac77e34f2c64088daa 371 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Theam_1166 38e2d7d7b86a54ac77e34f2c64088daa 371 SUPERFAMILY SSF53927 3 141 4.14E-48 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Theam_1166 38e2d7d7b86a54ac77e34f2c64088daa 371 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 357 2.8E-105 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Theam_1690 8799a7c196c748c499a62f89f508db33 153 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 150 5.0E-62 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Theam_1690 8799a7c196c748c499a62f89f508db33 153 SUPERFAMILY SSF74982 9 132 3.53E-51 T 13-10-2018 IPR023620 Small protein B Theam_1690 8799a7c196c748c499a62f89f508db33 153 Pfam PF01668 SmpB protein 9 150 2.1E-63 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Theam_1690 8799a7c196c748c499a62f89f508db33 153 Hamap MF_00023 SsrA-binding protein [smpB]. 1 153 71.969 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Theam_1690 8799a7c196c748c499a62f89f508db33 153 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 132 2.0E-44 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Theam_1690 8799a7c196c748c499a62f89f508db33 153 ProSitePatterns PS01317 SsrA-binding protein. 26 38 - T 13-10-2018 IPR020081 SsrA-binding protein, conserved site Theam_1690 8799a7c196c748c499a62f89f508db33 153 Gene3D G3DSA:2.40.280.10 5 129 6.5E-52 T 13-10-2018 IPR023620 Small protein B Theam_0765 bfff88f23d744a3dd504cfd4484a71e7 894 Pfam PF02463 RecF/RecN/SMC N terminal domain 4 886 2.2E-15 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Theam_0765 bfff88f23d744a3dd504cfd4484a71e7 894 Hamap MF_00449 DNA double-strand break repair Rad50 ATPase [rad50]. 2 893 11.993 T 13-10-2018 IPR022982 DNA double-strand break repair Rad50 ATPase, archaeal type Theam_0765 bfff88f23d744a3dd504cfd4484a71e7 894 SUPERFAMILY SSF52540 2 882 1.95E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0765 bfff88f23d744a3dd504cfd4484a71e7 894 Gene3D G3DSA:1.10.287.510 395 502 3.2E-12 T 13-10-2018 Theam_0765 bfff88f23d744a3dd504cfd4484a71e7 894 Gene3D G3DSA:3.40.50.300 648 894 6.6E-38 T 13-10-2018 Theam_0765 bfff88f23d744a3dd504cfd4484a71e7 894 Gene3D G3DSA:3.40.50.300 2 259 1.0E-42 T 13-10-2018 Theam_0765 bfff88f23d744a3dd504cfd4484a71e7 894 Pfam PF04423 Rad50 zinc hook motif 422 467 8.1E-8 T 13-10-2018 IPR013134 RAD50, zinc hook Reactome: R-HSA-2559586|Reactome: R-HSA-5685938|Reactome: R-HSA-5685939|Reactome: R-HSA-5685942|Reactome: R-HSA-5693548|Reactome: R-HSA-5693554|Reactome: R-HSA-5693565|Reactome: R-HSA-5693568|Reactome: R-HSA-5693571|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Theam_0765 bfff88f23d744a3dd504cfd4484a71e7 894 SUPERFAMILY SSF75712 399 493 7.59E-13 T 13-10-2018 Theam_1666 aeac0f934667851d75049fd2a7dd3e55 208 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 35 119 2.0E-17 T 13-10-2018 IPR007172 Domain of unknown function DUF374 Theam_1666 aeac0f934667851d75049fd2a7dd3e55 208 Pfam PF04028 Domain of unknown function (DUF374) 54 120 3.3E-28 T 13-10-2018 IPR007172 Domain of unknown function DUF374 Theam_1024 352977ecf1f383b9f4705a0b15d61c60 652 Gene3D G3DSA:3.20.19.10 467 652 7.4E-51 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Theam_1024 352977ecf1f383b9f4705a0b15d61c60 652 ProSitePatterns PS00450 Aconitase family signature 1. 290 306 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Theam_1024 352977ecf1f383b9f4705a0b15d61c60 652 Gene3D G3DSA:3.30.499.20 4 268 5.6E-87 T 13-10-2018 Theam_1024 352977ecf1f383b9f4705a0b15d61c60 652 TIGRFAM TIGR01342 acon_putative: putative aconitate hydratase 5 649 3.2E-286 T 13-10-2018 IPR006250 Aconitase, putative Theam_1024 352977ecf1f383b9f4705a0b15d61c60 652 SUPERFAMILY SSF53732 1 437 1.96E-148 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Theam_1024 352977ecf1f383b9f4705a0b15d61c60 652 PRINTS PR00415 Aconitase family signature 187 200 1.4E-21 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Theam_1024 352977ecf1f383b9f4705a0b15d61c60 652 PRINTS PR00415 Aconitase family signature 352 365 1.4E-21 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Theam_1024 352977ecf1f383b9f4705a0b15d61c60 652 PRINTS PR00415 Aconitase family signature 111 124 1.4E-21 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Theam_1024 352977ecf1f383b9f4705a0b15d61c60 652 PRINTS PR00415 Aconitase family signature 125 140 1.4E-21 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Theam_1024 352977ecf1f383b9f4705a0b15d61c60 652 PRINTS PR00415 Aconitase family signature 201 214 1.4E-21 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Theam_1024 352977ecf1f383b9f4705a0b15d61c60 652 SUPERFAMILY SSF52016 440 644 1.59E-55 T 13-10-2018 Theam_1024 352977ecf1f383b9f4705a0b15d61c60 652 Pfam PF00694 Aconitase C-terminal domain 518 579 1.3E-23 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Theam_1024 352977ecf1f383b9f4705a0b15d61c60 652 ProSitePatterns PS01244 Aconitase family signature 2. 352 365 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Theam_1024 352977ecf1f383b9f4705a0b15d61c60 652 Pfam PF00330 Aconitase family (aconitate hydratase) 7 410 6.3E-112 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Theam_1024 352977ecf1f383b9f4705a0b15d61c60 652 Gene3D G3DSA:3.30.499.10 271 443 9.5E-51 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Theam_1151 da82879cd7cdeb3d496794bfc1d4e329 248 Gene3D G3DSA:3.40.50.300 10 248 7.7E-69 T 13-10-2018 Theam_1151 da82879cd7cdeb3d496794bfc1d4e329 248 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Theam_1151 da82879cd7cdeb3d496794bfc1d4e329 248 SMART SM00382 36 229 2.8E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1151 da82879cd7cdeb3d496794bfc1d4e329 248 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 12 248 1.9E-110 T 13-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 Theam_1151 da82879cd7cdeb3d496794bfc1d4e329 248 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 221 243 1.1E-5 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Theam_1151 da82879cd7cdeb3d496794bfc1d4e329 248 Pfam PF00005 ABC transporter 27 173 1.3E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_1151 da82879cd7cdeb3d496794bfc1d4e329 248 SUPERFAMILY SSF52540 12 243 2.6E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0031 967a5061a66b57c8418bd1ea39e1d81b 239 Pfam PF13401 AAA domain 24 127 9.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0031 967a5061a66b57c8418bd1ea39e1d81b 239 Gene3D G3DSA:3.40.50.300 6 155 1.5E-6 T 13-10-2018 Theam_0031 967a5061a66b57c8418bd1ea39e1d81b 239 SUPERFAMILY SSF52540 10 201 5.47E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1622 aa3ead2a255f84a400d1c9948e0d8c17 84 Pfam PF09827 CRISPR associated protein Cas2 1 63 7.8E-20 T 13-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Theam_1622 aa3ead2a255f84a400d1c9948e0d8c17 84 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 79 2.7E-13 T 13-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Theam_1622 aa3ead2a255f84a400d1c9948e0d8c17 84 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 84 11.443 T 13-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Theam_1622 aa3ead2a255f84a400d1c9948e0d8c17 84 Gene3D G3DSA:3.30.70.240 1 63 4.0E-25 T 13-10-2018 Theam_1622 aa3ead2a255f84a400d1c9948e0d8c17 84 SUPERFAMILY SSF143430 1 77 2.35E-21 T 13-10-2018 Theam_0738 fc2e7f5ea56d98ebe60fb8c2c9ed23b5 157 SUPERFAMILY SSF51206 8 137 2.23E-30 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Theam_0738 fc2e7f5ea56d98ebe60fb8c2c9ed23b5 157 SMART SM00100 12 133 1.0E-14 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Theam_0738 fc2e7f5ea56d98ebe60fb8c2c9ed23b5 157 Gene3D G3DSA:2.60.120.10 2 149 2.4E-36 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Theam_0738 fc2e7f5ea56d98ebe60fb8c2c9ed23b5 157 Pfam PF00027 Cyclic nucleotide-binding domain 31 117 8.4E-15 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 ProSitePatterns PS00110 Pyruvate kinase active site signature. 211 223 - T 13-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 PRINTS PR01050 Pyruvate kinase family signature 265 289 6.4E-68 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 PRINTS PR01050 Pyruvate kinase family signature 183 197 6.4E-68 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 PRINTS PR01050 Pyruvate kinase family signature 290 308 6.4E-68 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 PRINTS PR01050 Pyruvate kinase family signature 309 325 6.4E-68 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 PRINTS PR01050 Pyruvate kinase family signature 240 264 6.4E-68 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 PRINTS PR01050 Pyruvate kinase family signature 60 76 6.4E-68 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 PRINTS PR01050 Pyruvate kinase family signature 213 239 6.4E-68 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 SUPERFAMILY SSF50800 71 163 8.02E-24 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 Gene3D G3DSA:2.40.33.10 71 165 6.3E-189 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 Gene3D G3DSA:3.20.20.60 3 331 6.3E-189 T 13-10-2018 Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 SUPERFAMILY SSF51621 2 340 6.63E-102 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 Pfam PF02887 Pyruvate kinase, alpha/beta domain 350 463 1.2E-34 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 Pfam PF00224 Pyruvate kinase, barrel domain 3 336 2.7E-128 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 SUPERFAMILY SSF52935 320 465 4.84E-41 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 Gene3D G3DSA:3.40.1380.20 332 461 6.3E-189 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Theam_1279 fdb52e4c96017fb6a812f4155c2189e0 466 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 465 1.0E-173 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Theam_0755 ab5b3c7bd1146da31dc94bb266041413 223 Gene3D G3DSA:3.40.50.880 1 219 2.0E-60 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Theam_0755 ab5b3c7bd1146da31dc94bb266041413 223 SUPERFAMILY SSF52317 34 199 1.08E-46 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Theam_0755 ab5b3c7bd1146da31dc94bb266041413 223 Pfam PF00117 Glutamine amidotransferase class-I 14 176 1.8E-18 T 13-10-2018 IPR017926 Glutamine amidotransferase Theam_1760 2c144a9ab45a5c4ac1edf01e817cddda 234 Gene3D G3DSA:3.40.30.10 86 230 1.2E-9 T 13-10-2018 Theam_1760 2c144a9ab45a5c4ac1edf01e817cddda 234 SUPERFAMILY SSF52833 114 213 1.06E-9 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Theam_1021 53420341cbac465db9236df2deef58a0 616 Pfam PF00285 Citrate synthase, C-terminal domain 401 592 1.3E-21 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Theam_1021 53420341cbac465db9236df2deef58a0 616 Gene3D G3DSA:3.40.50.720 5 139 2.9E-50 T 13-10-2018 Theam_1021 53420341cbac465db9236df2deef58a0 616 Gene3D G3DSA:1.10.230.10 452 552 2.3E-11 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Theam_1021 53420341cbac465db9236df2deef58a0 616 Gene3D G3DSA:3.40.50.261 140 335 1.4E-56 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Theam_1021 53420341cbac465db9236df2deef58a0 616 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 261 277 - T 13-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Theam_1021 53420341cbac465db9236df2deef58a0 616 SUPERFAMILY SSF51735 6 138 1.53E-15 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_1021 53420341cbac465db9236df2deef58a0 616 Pfam PF00549 CoA-ligase 176 299 3.9E-10 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Theam_1021 53420341cbac465db9236df2deef58a0 616 SUPERFAMILY SSF48256 132 607 2.22E-68 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Theam_0640 b8e046d0a336f1cb85807ba07df40efd 325 Pfam PF00294 pfkB family carbohydrate kinase 13 307 1.1E-46 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Theam_0640 b8e046d0a336f1cb85807ba07df40efd 325 Gene3D G3DSA:3.40.1190.20 4 314 3.7E-109 T 13-10-2018 IPR029056 Ribokinase-like Theam_0640 b8e046d0a336f1cb85807ba07df40efd 325 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 263 276 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Theam_0640 b8e046d0a336f1cb85807ba07df40efd 325 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 317 1.3E-118 T 13-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Theam_0640 b8e046d0a336f1cb85807ba07df40efd 325 SUPERFAMILY SSF53613 14 315 1.87E-57 T 13-10-2018 IPR029056 Ribokinase-like Theam_0655 0e7aa186032dfd4e8319ff993bfc52c1 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 239 2.7E-63 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0655 0e7aa186032dfd4e8319ff993bfc52c1 248 Pfam PF00121 Triosephosphate isomerase 5 245 1.2E-96 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0655 0e7aa186032dfd4e8319ff993bfc52c1 248 SUPERFAMILY SSF51351 2 247 4.45E-98 T 13-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0655 0e7aa186032dfd4e8319ff993bfc52c1 248 Gene3D G3DSA:3.20.20.70 1 248 8.5E-106 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0655 0e7aa186032dfd4e8319ff993bfc52c1 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 163 173 - T 13-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0655 0e7aa186032dfd4e8319ff993bfc52c1 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 247 63.406 T 13-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0418 609833303e1e14909cc1aa2469d8728f 458 Gene3D G3DSA:1.10.3820.10 2 149 1.2E-5 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily Theam_0418 609833303e1e14909cc1aa2469d8728f 458 Pfam PF13435 Cytochrome c554 and c-prime 38 76 0.0044 T 13-10-2018 IPR023155 Cytochrome c-552/4 Theam_0418 609833303e1e14909cc1aa2469d8728f 458 Gene3D G3DSA:1.20.850.10 213 414 8.6E-32 T 13-10-2018 Theam_0418 609833303e1e14909cc1aa2469d8728f 458 Pfam PF13447 Seven times multi-haem cytochrome CxxCH 180 338 2.5E-21 T 13-10-2018 Theam_0418 609833303e1e14909cc1aa2469d8728f 458 SUPERFAMILY SSF48695 22 393 7.5E-65 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_0276 27d444e5425a5792efb3452b9cf252c6 152 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 5 149 4.1E-56 T 13-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0276 27d444e5425a5792efb3452b9cf252c6 152 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 29 149 6.1E-42 T 13-10-2018 IPR021131 Ribosomal protein L18e/L15P Theam_0276 27d444e5425a5792efb3452b9cf252c6 152 ProSitePatterns PS00475 Ribosomal protein L15 signature. 115 145 - T 13-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0276 27d444e5425a5792efb3452b9cf252c6 152 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 151 23.435 T 13-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Theam_0276 27d444e5425a5792efb3452b9cf252c6 152 Gene3D G3DSA:3.100.10.10 73 151 2.0E-25 T 13-10-2018 Theam_0276 27d444e5425a5792efb3452b9cf252c6 152 SUPERFAMILY SSF52080 7 150 3.79E-49 T 13-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Theam_1539 a7053f0c7f20652385287b13b2f845b5 472 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Theam_1539 a7053f0c7f20652385287b13b2f845b5 472 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 108 4.8E-43 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Theam_1539 a7053f0c7f20652385287b13b2f845b5 472 Gene3D G3DSA:3.30.470.130 1 448 3.2E-192 T 13-10-2018 Theam_1539 a7053f0c7f20652385287b13b2f845b5 472 Pfam PF02785 Biotin carboxylase C-terminal domain 335 441 1.8E-41 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Theam_1539 a7053f0c7f20652385287b13b2f845b5 472 SUPERFAMILY SSF56059 82 347 7.41E-70 T 13-10-2018 Theam_1539 a7053f0c7f20652385287b13b2f845b5 472 SUPERFAMILY SSF51246 330 447 1.1E-44 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Theam_1539 a7053f0c7f20652385287b13b2f845b5 472 SUPERFAMILY SSF52440 1 111 1.44E-45 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Theam_1539 a7053f0c7f20652385287b13b2f845b5 472 SMART SM00878 335 441 3.0E-63 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Theam_1539 a7053f0c7f20652385287b13b2f845b5 472 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Theam_1539 a7053f0c7f20652385287b13b2f845b5 472 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 2.1E-82 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Theam_1539 a7053f0c7f20652385287b13b2f845b5 472 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 4.1E-198 T 13-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Theam_0898 2d9eb970fbd242dd3f1f5f1efacd7c3d 403 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 13-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 Theam_0898 2d9eb970fbd242dd3f1f5f1efacd7c3d 403 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 5.8E-20 T 13-10-2018 IPR018076 Type II secretion system F domain Theam_0898 2d9eb970fbd242dd3f1f5f1efacd7c3d 403 Pfam PF00482 Type II secretion system (T2SS), protein F 271 393 4.1E-21 T 13-10-2018 IPR018076 Type II secretion system F domain Theam_0898 2d9eb970fbd242dd3f1f5f1efacd7c3d 403 Gene3D G3DSA:1.20.81.30 254 366 1.0E-21 T 13-10-2018 Theam_0898 2d9eb970fbd242dd3f1f5f1efacd7c3d 403 Gene3D G3DSA:1.20.81.30 54 169 4.4E-19 T 13-10-2018 Theam_0898 2d9eb970fbd242dd3f1f5f1efacd7c3d 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 4.2E-22 T 13-10-2018 IPR003004 GspF/PilC family Theam_0898 2d9eb970fbd242dd3f1f5f1efacd7c3d 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 366 380 4.2E-22 T 13-10-2018 IPR003004 GspF/PilC family Theam_0898 2d9eb970fbd242dd3f1f5f1efacd7c3d 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 4.2E-22 T 13-10-2018 IPR003004 GspF/PilC family Theam_0898 2d9eb970fbd242dd3f1f5f1efacd7c3d 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 382 401 4.2E-22 T 13-10-2018 IPR003004 GspF/PilC family Theam_1371 95b642c3adebc14dcd4a09151eb26d06 397 Gene3D G3DSA:1.10.287.130 190 245 2.0E-15 T 13-10-2018 Theam_1371 95b642c3adebc14dcd4a09151eb26d06 397 SUPERFAMILY SSF55874 254 388 3.67E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_1371 95b642c3adebc14dcd4a09151eb26d06 397 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 285 387 6.2E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_1371 95b642c3adebc14dcd4a09151eb26d06 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 347 4.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1371 95b642c3adebc14dcd4a09151eb26d06 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 333 4.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1371 95b642c3adebc14dcd4a09151eb26d06 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 385 4.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1371 95b642c3adebc14dcd4a09151eb26d06 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 366 4.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1371 95b642c3adebc14dcd4a09151eb26d06 397 Pfam PF00512 His Kinase A (phospho-acceptor) domain 189 247 1.3E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Theam_1371 95b642c3adebc14dcd4a09151eb26d06 397 SMART SM00387 284 388 2.6E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_1371 95b642c3adebc14dcd4a09151eb26d06 397 SUPERFAMILY SSF47384 175 249 1.02E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Theam_1371 95b642c3adebc14dcd4a09151eb26d06 397 SMART SM00388 186 248 1.6E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Theam_1371 95b642c3adebc14dcd4a09151eb26d06 397 Gene3D G3DSA:3.30.565.10 250 393 1.7E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_1056 0b3f7cf1fb2e842f8a88e66d17ac18c6 152 SUPERFAMILY SSF49777 1 150 4.19E-47 T 13-10-2018 IPR036610 PEBP-like superfamily Theam_1056 0b3f7cf1fb2e842f8a88e66d17ac18c6 152 Pfam PF01161 Phosphatidylethanolamine-binding protein 14 150 1.6E-34 T 13-10-2018 IPR008914 Phosphatidylethanolamine-binding protein Theam_1056 0b3f7cf1fb2e842f8a88e66d17ac18c6 152 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 17 150 1.1E-34 T 13-10-2018 IPR005247 YbhB/YbcL Theam_1056 0b3f7cf1fb2e842f8a88e66d17ac18c6 152 Gene3D G3DSA:3.90.280.10 1 152 5.2E-54 T 13-10-2018 IPR036610 PEBP-like superfamily Theam_1401 9dda26f81db2ca89c373c16553cc8401 292 Pfam PF03755 YicC-like family, N-terminal region 1 153 3.4E-36 T 13-10-2018 IPR013527 YicC-like, N-terminal Theam_1401 9dda26f81db2ca89c373c16553cc8401 292 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 292 1.7E-67 T 13-10-2018 IPR005229 Conserved hypothetical protein CHP00255 Theam_1401 9dda26f81db2ca89c373c16553cc8401 292 Pfam PF08340 Domain of unknown function (DUF1732) 209 292 6.4E-32 T 13-10-2018 IPR013551 Domain of unknown function DUF1732 Theam_0347 8e1fdeb0c132afea10cce344b0e3d4ba 167 SUPERFAMILY SSF52016 3 164 4.71E-55 T 13-10-2018 Theam_0347 8e1fdeb0c132afea10cce344b0e3d4ba 167 Gene3D G3DSA:3.20.19.10 1 166 4.1E-65 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Theam_0347 8e1fdeb0c132afea10cce344b0e3d4ba 167 Pfam PF00694 Aconitase C-terminal domain 41 102 6.7E-22 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Theam_0347 8e1fdeb0c132afea10cce344b0e3d4ba 167 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 7 162 7.5E-70 T 13-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Theam_0347 8e1fdeb0c132afea10cce344b0e3d4ba 167 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 5 165 42.416 T 13-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Theam_0347 8e1fdeb0c132afea10cce344b0e3d4ba 167 TIGRFAM TIGR02084 leud: 3-isopropylmalate dehydratase, small subunit 7 161 2.0E-80 T 13-10-2018 IPR011824 Hydrolyase LeuD/DmdB, bacterial GO:0016836 KEGG: 00290+4.2.1.33 Theam_1019 15e7bf52ea3b4c94274f35bc236548b5 250 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 33 61 - T 13-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Theam_1019 15e7bf52ea3b4c94274f35bc236548b5 250 SMART SM00650 17 184 5.1E-73 T 13-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Theam_1019 15e7bf52ea3b4c94274f35bc236548b5 250 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 1 248 47.016 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Theam_1019 15e7bf52ea3b4c94274f35bc236548b5 250 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 1 246 4.7E-72 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Theam_1019 15e7bf52ea3b4c94274f35bc236548b5 250 Gene3D G3DSA:3.40.50.150 1 186 8.1E-61 T 13-10-2018 Theam_1019 15e7bf52ea3b4c94274f35bc236548b5 250 Pfam PF00398 Ribosomal RNA adenine dimethylase 3 217 1.3E-52 T 13-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Theam_1019 15e7bf52ea3b4c94274f35bc236548b5 250 Gene3D G3DSA:1.10.8.100 187 250 3.6E-9 T 13-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Theam_1019 15e7bf52ea3b4c94274f35bc236548b5 250 SUPERFAMILY SSF53335 2 248 4.22E-67 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_1825 dfcbb96c0441701395235d048fe63f50 387 Gene3D G3DSA:3.40.50.300 123 297 4.4E-33 T 13-10-2018 Theam_1825 dfcbb96c0441701395235d048fe63f50 387 SMART SM00382 134 289 1.2E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1825 dfcbb96c0441701395235d048fe63f50 387 Pfam PF07728 AAA domain (dynein-related subfamily) 138 279 7.0E-22 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Theam_1825 dfcbb96c0441701395235d048fe63f50 387 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 293 357 7.4E-7 T 13-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Theam_1825 dfcbb96c0441701395235d048fe63f50 387 SUPERFAMILY SSF52540 124 345 2.54E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0644 b78332ec35328aa803b505c6f39236c9 132 Pfam PF00581 Rhodanese-like domain 32 121 8.0E-8 T 13-10-2018 IPR001763 Rhodanese-like domain Theam_0644 b78332ec35328aa803b505c6f39236c9 132 Gene3D G3DSA:3.40.250.10 24 130 9.5E-18 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Theam_0644 b78332ec35328aa803b505c6f39236c9 132 SUPERFAMILY SSF52821 16 119 3.01E-18 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Theam_0644 b78332ec35328aa803b505c6f39236c9 132 SMART SM00450 26 128 5.4E-9 T 13-10-2018 IPR001763 Rhodanese-like domain Theam_1283 3d2cfedbe6c8e918ef02db6d61a5bbd7 295 SUPERFAMILY SSF52540 30 282 1.73E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1283 3d2cfedbe6c8e918ef02db6d61a5bbd7 295 Pfam PF06745 KaiC 33 286 1.1E-64 T 13-10-2018 IPR014774 KaiC-like domain Theam_1283 3d2cfedbe6c8e918ef02db6d61a5bbd7 295 Gene3D G3DSA:3.40.50.300 23 285 5.3E-34 T 13-10-2018 Theam_1283 3d2cfedbe6c8e918ef02db6d61a5bbd7 295 TIGRFAM TIGR03878 thermo_KaiC_2: KaiC domain protein, AF_0795 family 30 287 1.0E-132 T 13-10-2018 IPR022373 KaiC domain-containing protein Theam_1015 f88014ed4f238254509b5c8bdc8b0687 310 SUPERFAMILY SSF53800 2 307 4.91E-81 T 13-10-2018 Theam_1015 f88014ed4f238254509b5c8bdc8b0687 310 TIGRFAM TIGR00109 hemH: ferrochelatase 2 307 3.3E-79 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Theam_1015 f88014ed4f238254509b5c8bdc8b0687 310 Pfam PF00762 Ferrochelatase 2 305 6.5E-89 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Theam_1015 f88014ed4f238254509b5c8bdc8b0687 310 Gene3D G3DSA:3.40.50.1400 152 289 1.3E-85 T 13-10-2018 Theam_1015 f88014ed4f238254509b5c8bdc8b0687 310 Gene3D G3DSA:3.40.50.1400 3 305 1.3E-85 T 13-10-2018 Theam_1015 f88014ed4f238254509b5c8bdc8b0687 310 Hamap MF_00323 Ferrochelatase [hemH]. 1 308 31.536 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Theam_0681 4aa3e35f3a5f5d4c7e1997af930cf966 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 3.3E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Theam_0681 4aa3e35f3a5f5d4c7e1997af930cf966 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 3.3E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Theam_0681 4aa3e35f3a5f5d4c7e1997af930cf966 188 Gene3D G3DSA:1.10.357.10 49 187 2.5E-20 T 13-10-2018 Theam_0681 4aa3e35f3a5f5d4c7e1997af930cf966 188 Gene3D G3DSA:1.10.10.60 3 48 1.6E-15 T 13-10-2018 Theam_0681 4aa3e35f3a5f5d4c7e1997af930cf966 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 1.1E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Theam_0681 4aa3e35f3a5f5d4c7e1997af930cf966 188 SUPERFAMILY SSF48498 73 184 2.35E-13 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Theam_0681 4aa3e35f3a5f5d4c7e1997af930cf966 188 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 50 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Theam_0681 4aa3e35f3a5f5d4c7e1997af930cf966 188 SUPERFAMILY SSF46689 4 70 1.13E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Theam_0254 547856970702eb2f320899a249e91580 700 Gene3D G3DSA:2.40.30.10 301 412 3.8E-43 T 13-10-2018 Theam_0254 547856970702eb2f320899a249e91580 700 SUPERFAMILY SSF52540 14 289 1.92E-114 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0254 547856970702eb2f320899a249e91580 700 SMART SM00889 487 605 1.4E-76 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Theam_0254 547856970702eb2f320899a249e91580 700 Gene3D G3DSA:3.40.50.300 10 300 1.2E-119 T 13-10-2018 Theam_0254 547856970702eb2f320899a249e91580 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 12 699 0.0 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Theam_0254 547856970702eb2f320899a249e91580 700 Hamap MF_00054_B Elongation factor G [fusA]. 14 698 117.57 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Theam_0254 547856970702eb2f320899a249e91580 700 SUPERFAMILY SSF54211 486 606 5.82E-48 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_0254 547856970702eb2f320899a249e91580 700 Gene3D G3DSA:3.30.230.10 491 694 8.1E-101 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Theam_0254 547856970702eb2f320899a249e91580 700 Gene3D G3DSA:3.30.70.870 413 490 1.2E-35 T 13-10-2018 Theam_0254 547856970702eb2f320899a249e91580 700 PRINTS PR00315 GTP-binding elongation factor signature 86 96 3.7E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_0254 547856970702eb2f320899a249e91580 700 PRINTS PR00315 GTP-binding elongation factor signature 20 33 3.7E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_0254 547856970702eb2f320899a249e91580 700 PRINTS PR00315 GTP-binding elongation factor signature 66 74 3.7E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_0254 547856970702eb2f320899a249e91580 700 PRINTS PR00315 GTP-binding elongation factor signature 138 147 3.7E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_0254 547856970702eb2f320899a249e91580 700 PRINTS PR00315 GTP-binding elongation factor signature 102 113 3.7E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_0254 547856970702eb2f320899a249e91580 700 Gene3D G3DSA:3.30.70.240 611 681 8.1E-101 T 13-10-2018 Theam_0254 547856970702eb2f320899a249e91580 700 Pfam PF03144 Elongation factor Tu domain 2 331 398 8.0E-13 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Theam_0254 547856970702eb2f320899a249e91580 700 SUPERFAMILY SSF54980 610 697 1.77E-33 T 13-10-2018 IPR035647 EF-G domain III/V-like Theam_0254 547856970702eb2f320899a249e91580 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 59 74 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Theam_0254 547856970702eb2f320899a249e91580 700 Pfam PF03764 Elongation factor G, domain IV 486 605 3.0E-50 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Theam_0254 547856970702eb2f320899a249e91580 700 SUPERFAMILY SSF54980 409 487 2.37E-27 T 13-10-2018 IPR035647 EF-G domain III/V-like Theam_0254 547856970702eb2f320899a249e91580 700 SUPERFAMILY SSF50447 272 411 1.67E-36 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Theam_0254 547856970702eb2f320899a249e91580 700 Pfam PF14492 Elongation Factor G, domain II 411 485 1.1E-36 T 13-10-2018 Theam_0254 547856970702eb2f320899a249e91580 700 Pfam PF00679 Elongation factor G C-terminus 607 693 8.8E-34 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Theam_0254 547856970702eb2f320899a249e91580 700 SMART SM00838 607 694 2.0E-60 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Theam_0254 547856970702eb2f320899a249e91580 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 187 3.6E-35 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Theam_0254 547856970702eb2f320899a249e91580 700 Pfam PF00009 Elongation factor Tu GTP binding domain 17 289 5.5E-71 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Theam_0522 2eefe0ff0345aa7f6da3b6bb0dc8c7bb 275 Pfam PF00753 Metallo-beta-lactamase superfamily 41 232 8.3E-12 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_0522 2eefe0ff0345aa7f6da3b6bb0dc8c7bb 275 SMART SM00849 41 232 7.9E-19 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_0522 2eefe0ff0345aa7f6da3b6bb0dc8c7bb 275 Gene3D G3DSA:3.60.15.10 22 247 7.9E-48 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_0522 2eefe0ff0345aa7f6da3b6bb0dc8c7bb 275 SUPERFAMILY SSF56281 26 248 1.06E-33 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_0764 d43842157fd0359944e5e4fa4f696c94 565 Pfam PF00924 Mechanosensitive ion channel 331 538 2.1E-46 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Theam_0764 d43842157fd0359944e5e4fa4f696c94 565 Gene3D G3DSA:3.30.70.100 447 542 5.7E-21 T 13-10-2018 Theam_0764 d43842157fd0359944e5e4fa4f696c94 565 SUPERFAMILY SSF82689 448 549 4.18E-24 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Theam_0764 d43842157fd0359944e5e4fa4f696c94 565 SUPERFAMILY SSF82861 285 366 3.53E-5 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Theam_0764 d43842157fd0359944e5e4fa4f696c94 565 Gene3D G3DSA:2.30.30.60 384 444 8.6E-10 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Theam_0764 d43842157fd0359944e5e4fa4f696c94 565 SUPERFAMILY SSF50182 368 445 4.58E-13 T 13-10-2018 IPR010920 LSM domain superfamily Theam_1076 2e3c1cc02a391cb5f40cd01d8ae5d69b 630 SUPERFAMILY SSF52833 2 141 3.81E-31 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Theam_1076 2e3c1cc02a391cb5f40cd01d8ae5d69b 630 PIRSF PIRSF006402 1 616 5.0E-189 T 13-10-2018 IPR024705 Spermatogenesis-associated protein 20 Theam_1076 2e3c1cc02a391cb5f40cd01d8ae5d69b 630 Pfam PF03190 Protein of unknown function, DUF255 3 157 1.9E-64 T 13-10-2018 IPR004879 Domain of unknown function DUF255 Theam_1076 2e3c1cc02a391cb5f40cd01d8ae5d69b 630 SUPERFAMILY SSF48208 182 505 5.29E-47 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Theam_1076 2e3c1cc02a391cb5f40cd01d8ae5d69b 630 Gene3D G3DSA:3.40.30.10 1 163 3.0E-62 T 13-10-2018 Theam_1106 5d4232dbdd27e57b0e9e8dbf7fb327b0 348 SUPERFAMILY SSF51726 6 346 1.27E-110 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Theam_1106 5d4232dbdd27e57b0e9e8dbf7fb327b0 348 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 8 341 1.9E-129 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Theam_1106 5d4232dbdd27e57b0e9e8dbf7fb327b0 348 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Theam_1106 5d4232dbdd27e57b0e9e8dbf7fb327b0 348 Gene3D G3DSA:3.20.20.210 1 348 2.3E-141 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Theam_1106 5d4232dbdd27e57b0e9e8dbf7fb327b0 348 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 5 343 48.486 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Theam_1106 5d4232dbdd27e57b0e9e8dbf7fb327b0 348 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 4 341 7.6E-126 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Theam_1106 5d4232dbdd27e57b0e9e8dbf7fb327b0 348 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 21 30 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Theam_0010 34e5e79715450d087004952acf416966 294 Pfam PF00348 Polyprenyl synthetase 30 266 7.9E-63 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Theam_0010 34e5e79715450d087004952acf416966 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site Theam_0010 34e5e79715450d087004952acf416966 294 SUPERFAMILY SSF48576 4 272 1.13E-87 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Theam_0010 34e5e79715450d087004952acf416966 294 Gene3D G3DSA:1.10.600.10 1 294 1.5E-103 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Theam_0010 34e5e79715450d087004952acf416966 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 212 224 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site Theam_1173 d50806178a463a0d902dcf98e04fbe89 241 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 33.729 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Theam_1173 d50806178a463a0d902dcf98e04fbe89 241 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Theam_1173 d50806178a463a0d902dcf98e04fbe89 241 SUPERFAMILY SSF56104 2 234 1.08E-87 T 13-10-2018 Theam_1173 d50806178a463a0d902dcf98e04fbe89 241 Gene3D G3DSA:3.30.470.20 85 220 2.9E-100 T 13-10-2018 Theam_1173 d50806178a463a0d902dcf98e04fbe89 241 Pfam PF01259 SAICAR synthetase 6 231 1.8E-69 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Theam_1173 d50806178a463a0d902dcf98e04fbe89 241 Gene3D G3DSA:3.30.200.20 6 231 2.9E-100 T 13-10-2018 Theam_1173 d50806178a463a0d902dcf98e04fbe89 241 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Theam_1173 d50806178a463a0d902dcf98e04fbe89 241 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 233 9.7E-76 T 13-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 Theam_1538 18f09a733401eb95f4608a599f3903a6 153 Pfam PF04608 Phosphatidylglycerophosphatase A 7 147 2.2E-35 T 13-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 Theam_1538 18f09a733401eb95f4608a599f3903a6 153 PIRSF PIRSF006162 1 153 6.4E-40 T 13-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Theam_1538 18f09a733401eb95f4608a599f3903a6 153 SUPERFAMILY SSF101307 6 147 5.1E-26 T 13-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 Theam_1457 69a9dbb40031f372a4f617a441d744e0 285 PIRSF PIRSF003092 1 283 8.8E-58 T 13-10-2018 IPR025501 ATP binding protein MinD Theam_1457 69a9dbb40031f372a4f617a441d744e0 285 SUPERFAMILY SSF52540 22 282 3.83E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1457 69a9dbb40031f372a4f617a441d744e0 285 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 25 239 5.7E-18 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Theam_1457 69a9dbb40031f372a4f617a441d744e0 285 Gene3D G3DSA:3.40.50.300 21 259 3.4E-52 T 13-10-2018 Theam_0821 b1d829a390defc2087950fae15872501 222 Pfam PF01966 HD domain 40 137 7.5E-7 T 13-10-2018 IPR006674 HD domain Theam_0821 b1d829a390defc2087950fae15872501 222 SMART SM00471 33 148 3.5E-6 T 13-10-2018 IPR003607 HD/PDEase domain Theam_0821 b1d829a390defc2087950fae15872501 222 Gene3D G3DSA:1.10.3210.10 11 161 2.3E-16 T 13-10-2018 Theam_0821 b1d829a390defc2087950fae15872501 222 SUPERFAMILY SSF109604 11 141 4.11E-19 T 13-10-2018 Theam_0057 522512656cee35609f2c506f47aeca53 164 Pfam PF11985 Protein of unknown function (DUF3486) 27 148 9.2E-15 T 13-10-2018 IPR021874 Bacteriophage Mu, Gp27 Theam_0826 507b81c898a6f5313b5e181bd8b6ff38 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 4.3E-63 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Theam_0826 507b81c898a6f5313b5e181bd8b6ff38 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 4.3E-63 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Theam_0826 507b81c898a6f5313b5e181bd8b6ff38 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 89 111 4.3E-63 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Theam_0826 507b81c898a6f5313b5e181bd8b6ff38 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 111 138 4.3E-63 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Theam_0826 507b81c898a6f5313b5e181bd8b6ff38 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 4.3E-63 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Theam_0826 507b81c898a6f5313b5e181bd8b6ff38 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 4.3E-63 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Theam_0826 507b81c898a6f5313b5e181bd8b6ff38 284 Gene3D G3DSA:3.30.70.260 3 86 2.6E-25 T 13-10-2018 Theam_0826 507b81c898a6f5313b5e181bd8b6ff38 284 SUPERFAMILY SSF53328 88 283 7.85E-62 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Theam_0826 507b81c898a6f5313b5e181bd8b6ff38 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 283 47.606 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Theam_0826 507b81c898a6f5313b5e181bd8b6ff38 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 283 2.8E-130 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Theam_0826 507b81c898a6f5313b5e181bd8b6ff38 284 Gene3D G3DSA:3.40.50.170 87 284 1.3E-73 T 13-10-2018 Theam_0826 507b81c898a6f5313b5e181bd8b6ff38 284 PIRSF PIRSF036480 2 284 9.7E-120 T 13-10-2018 Theam_0826 507b81c898a6f5313b5e181bd8b6ff38 284 Pfam PF01842 ACT domain 6 50 9.9E-11 T 13-10-2018 IPR002912 ACT domain Theam_0826 507b81c898a6f5313b5e181bd8b6ff38 284 Pfam PF00551 Formyl transferase 88 265 3.1E-44 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Theam_0826 507b81c898a6f5313b5e181bd8b6ff38 284 SUPERFAMILY SSF55021 4 85 1.45E-16 T 13-10-2018 Theam_0333 adca35800412f6816ac435f1bb129489 281 Gene3D G3DSA:3.20.20.140 8 253 6.7E-75 T 13-10-2018 Theam_0333 adca35800412f6816ac435f1bb129489 281 SUPERFAMILY SSF89550 7 260 3.92E-43 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Theam_0333 adca35800412f6816ac435f1bb129489 281 Pfam PF02811 PHP domain 9 94 2.4E-7 T 13-10-2018 IPR004013 PHP domain GO:0003824 Theam_0333 adca35800412f6816ac435f1bb129489 281 SMART SM00481 8 73 2.2E-18 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Theam_0333 adca35800412f6816ac435f1bb129489 281 Gene3D G3DSA:1.10.150.650 106 172 6.7E-75 T 13-10-2018 Theam_1064 35fa90ba2b0c04dd01b89b853800785c 135 SUPERFAMILY SSF54637 7 129 1.07E-30 T 13-10-2018 IPR029069 HotDog domain superfamily Theam_1064 35fa90ba2b0c04dd01b89b853800785c 135 Pfam PF03061 Thioesterase superfamily 49 119 4.2E-8 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Theam_1064 35fa90ba2b0c04dd01b89b853800785c 135 Gene3D G3DSA:3.10.129.10 4 135 3.0E-37 T 13-10-2018 Theam_0232 c8e0a8e4a53ebdb5e24a053ac910a57d 238 Gene3D G3DSA:1.20.5.340 79 184 3.9E-5 T 13-10-2018 Theam_0232 c8e0a8e4a53ebdb5e24a053ac910a57d 238 Pfam PF02591 C4-type zinc ribbon domain 196 229 4.0E-8 T 13-10-2018 IPR003743 C4-type zinc ribbon domain Theam_1465 1cd4c28f901dd4710ff9135ae811a6a8 238 Pfam PF00460 Flagella basal body rod protein 18 38 1.4E-7 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Theam_1465 1cd4c28f901dd4710ff9135ae811a6a8 238 SUPERFAMILY SSF117143 83 197 2.88E-19 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Theam_1465 1cd4c28f901dd4710ff9135ae811a6a8 238 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Theam_1465 1cd4c28f901dd4710ff9135ae811a6a8 238 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 8 216 9.2E-55 T 13-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 Theam_1465 1cd4c28f901dd4710ff9135ae811a6a8 238 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 9 126 1.7E-34 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Theam_1465 1cd4c28f901dd4710ff9135ae811a6a8 238 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 168 228 1.7E-15 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Theam_0157 dd9e9e76d38ee137dfb01fbef0b8ee35 602 SUPERFAMILY SSF58104 179 488 2.49E-60 T 13-10-2018 Theam_0157 dd9e9e76d38ee137dfb01fbef0b8ee35 602 SMART SM00304 159 211 1.4E-13 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Theam_0157 dd9e9e76d38ee137dfb01fbef0b8ee35 602 SMART SM00304 550 602 25.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Theam_0157 dd9e9e76d38ee137dfb01fbef0b8ee35 602 Gene3D G3DSA:1.10.287.950 158 489 1.5E-63 T 13-10-2018 Theam_0157 dd9e9e76d38ee137dfb01fbef0b8ee35 602 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 305 453 1.4E-37 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Theam_0157 dd9e9e76d38ee137dfb01fbef0b8ee35 602 Pfam PF00672 HAMP domain 159 203 4.6E-13 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Theam_0157 dd9e9e76d38ee137dfb01fbef0b8ee35 602 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 11 3.9E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Theam_0157 dd9e9e76d38ee137dfb01fbef0b8ee35 602 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 353 382 3.9E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Theam_0157 dd9e9e76d38ee137dfb01fbef0b8ee35 602 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 324 351 3.9E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Theam_0157 dd9e9e76d38ee137dfb01fbef0b8ee35 602 SMART SM00283 219 499 2.4E-33 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Theam_0751 4909c5481397dbde2b3b5ddecb9418ed 238 SMART SM00257 134 185 1.3E-7 T 13-10-2018 IPR018392 LysM domain Theam_0751 4909c5481397dbde2b3b5ddecb9418ed 238 Pfam PF01476 LysM domain 135 185 8.0E-12 T 13-10-2018 IPR018392 LysM domain Theam_0751 4909c5481397dbde2b3b5ddecb9418ed 238 SUPERFAMILY SSF54106 133 186 1.29E-6 T 13-10-2018 Theam_0751 4909c5481397dbde2b3b5ddecb9418ed 238 Gene3D G3DSA:3.10.350.10 133 184 4.2E-15 T 13-10-2018 IPR036779 LysM domain superfamily Theam_1098 27dd9786c62f95f22c0cbb33290d697d 142 PRINTS PR00813 Bacterial general secretion pathway protein G signature 51 69 1.2E-15 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Theam_1098 27dd9786c62f95f22c0cbb33290d697d 142 PRINTS PR00813 Bacterial general secretion pathway protein G signature 15 40 1.2E-15 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Theam_1098 27dd9786c62f95f22c0cbb33290d697d 142 Gene3D G3DSA:3.30.700.10 29 140 7.2E-34 T 13-10-2018 Theam_1098 27dd9786c62f95f22c0cbb33290d697d 142 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 35 3.3E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1098 27dd9786c62f95f22c0cbb33290d697d 142 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 14 136 1.3E-49 T 13-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 Theam_1098 27dd9786c62f95f22c0cbb33290d697d 142 Pfam PF08334 Type II secretion system (T2SS), protein G 39 137 4.2E-33 T 13-10-2018 IPR013545 Type II secretion system protein G Theam_1098 27dd9786c62f95f22c0cbb33290d697d 142 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1098 27dd9786c62f95f22c0cbb33290d697d 142 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 36 1.5E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1098 27dd9786c62f95f22c0cbb33290d697d 142 SUPERFAMILY SSF54523 43 138 6.28E-30 T 13-10-2018 Theam_1595 6904ae752408a3e620f02def07ee6d5d 499 SMART SM00471 287 422 3.4E-12 T 13-10-2018 IPR003607 HD/PDEase domain Theam_1595 6904ae752408a3e620f02def07ee6d5d 499 Gene3D G3DSA:1.10.3210.10 266 465 8.4E-71 T 13-10-2018 Theam_1595 6904ae752408a3e620f02def07ee6d5d 499 SUPERFAMILY SSF109604 274 451 2.66E-40 T 13-10-2018 Theam_1595 6904ae752408a3e620f02def07ee6d5d 499 TIGRFAM TIGR00277 HDIG: HDIG domain 289 381 7.0E-8 T 13-10-2018 IPR006675 HDIG domain Theam_1595 6904ae752408a3e620f02def07ee6d5d 499 Pfam PF01966 HD domain 293 413 3.7E-22 T 13-10-2018 IPR006674 HD domain Theam_0448 eba3e1d09ab3c8766a55aa09fc2476b5 213 Pfam PF00677 Lumazine binding domain 100 183 3.1E-21 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Theam_0448 eba3e1d09ab3c8766a55aa09fc2476b5 213 Pfam PF00677 Lumazine binding domain 3 86 2.0E-21 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Theam_0448 eba3e1d09ab3c8766a55aa09fc2476b5 213 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 5.0E-63 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Theam_0448 eba3e1d09ab3c8766a55aa09fc2476b5 213 Gene3D G3DSA:2.40.30.20 1 88 4.4E-28 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_0448 eba3e1d09ab3c8766a55aa09fc2476b5 213 SUPERFAMILY SSF63380 1 92 4.85E-24 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Theam_0448 eba3e1d09ab3c8766a55aa09fc2476b5 213 SUPERFAMILY SSF63380 92 194 3.32E-29 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Theam_0448 eba3e1d09ab3c8766a55aa09fc2476b5 213 PIRSF PIRSF000498 1 203 7.8E-68 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Theam_0448 eba3e1d09ab3c8766a55aa09fc2476b5 213 Gene3D G3DSA:2.40.30.20 101 201 1.4E-32 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Theam_0278 80dc33fef3f4c0789bda661e73afded8 187 Hamap MF_00235 Adenylate kinase [adk]. 2 184 48.363 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Theam_0278 80dc33fef3f4c0789bda661e73afded8 187 SUPERFAMILY SSF52540 2 183 7.2E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0278 80dc33fef3f4c0789bda661e73afded8 187 Gene3D G3DSA:3.40.50.300 1 185 7.2E-74 T 13-10-2018 Theam_0278 80dc33fef3f4c0789bda661e73afded8 187 Pfam PF00406 Adenylate kinase 7 160 2.5E-61 T 13-10-2018 Theam_0278 80dc33fef3f4c0789bda661e73afded8 187 PRINTS PR00094 Adenylate kinase signature 148 162 3.8E-37 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Theam_0278 80dc33fef3f4c0789bda661e73afded8 187 PRINTS PR00094 Adenylate kinase signature 33 47 3.8E-37 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Theam_0278 80dc33fef3f4c0789bda661e73afded8 187 PRINTS PR00094 Adenylate kinase signature 83 99 3.8E-37 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Theam_0278 80dc33fef3f4c0789bda661e73afded8 187 PRINTS PR00094 Adenylate kinase signature 131 146 3.8E-37 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Theam_0278 80dc33fef3f4c0789bda661e73afded8 187 PRINTS PR00094 Adenylate kinase signature 5 18 3.8E-37 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Theam_0278 80dc33fef3f4c0789bda661e73afded8 187 ProSitePatterns PS00113 Adenylate kinase signature. 83 94 - T 13-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Theam_0278 80dc33fef3f4c0789bda661e73afded8 187 TIGRFAM TIGR01351 adk: adenylate kinase 3 129 1.9E-55 T 13-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 Gene3D G3DSA:3.40.50.300 505 723 2.8E-93 T 13-10-2018 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 SUPERFAMILY SSF52540 502 814 1.1E-88 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 219 335 6.2E-15 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 SMART SM01086 725 816 2.0E-40 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 Gene3D G3DSA:3.40.50.300 164 357 1.6E-72 T 13-10-2018 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 SUPERFAMILY SSF52540 175 480 4.75E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 19 65 3.7E-9 T 13-10-2018 IPR004176 Clp, N-terminal Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 101 152 3.2E-9 T 13-10-2018 IPR004176 Clp, N-terminal Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 Pfam PF07724 AAA domain (Cdc48 subfamily) 552 719 5.9E-59 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 Pfam PF02151 UvrB/uvrC motif 431 465 8.9E-6 T 13-10-2018 IPR001943 UVR domain GO:0005515 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 Gene3D G3DSA:1.10.8.60 725 829 1.5E-34 T 13-10-2018 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 Gene3D G3DSA:1.10.1780.10 7 161 3.7E-29 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 Gene3D G3DSA:4.10.860.10 423 483 3.3E-42 T 13-10-2018 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 SMART SM00382 553 717 3.9E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 SMART SM00382 214 359 4.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 Gene3D G3DSA:1.10.8.60 361 497 3.3E-42 T 13-10-2018 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 725 805 1.0E-27 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 309 321 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 SUPERFAMILY SSF81923 7 155 3.14E-22 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 587 605 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 631 649 3.0E-43 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 664 678 3.0E-43 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 602 620 3.0E-43 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Theam_1071 34beb8352caf4c6e15ecce6a7b3221ba 847 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 557 575 3.0E-43 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Theam_0823 7de7078e2753bdea40970af247920746 283 Gene3D G3DSA:3.40.50.150 89 283 2.7E-58 T 13-10-2018 Theam_0823 7de7078e2753bdea40970af247920746 283 SUPERFAMILY SSF53335 14 265 1.11E-56 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_0823 7de7078e2753bdea40970af247920746 283 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 276 1.6E-77 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Theam_0823 7de7078e2753bdea40970af247920746 283 Gene3D G3DSA:1.10.8.10 4 88 4.5E-25 T 13-10-2018 Theam_0823 7de7078e2753bdea40970af247920746 283 Pfam PF13847 Methyltransferase domain 114 207 5.9E-12 T 13-10-2018 IPR025714 Methyltransferase domain Theam_0823 7de7078e2753bdea40970af247920746 283 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 280 40.384 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Theam_0823 7de7078e2753bdea40970af247920746 283 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 8 280 3.5E-67 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Theam_0838 0381c2068e3466eac6af713f9fb093af 367 SUPERFAMILY SSF52540 3 305 1.64E-89 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0838 0381c2068e3466eac6af713f9fb093af 367 Pfam PF06071 Protein of unknown function (DUF933) 283 366 7.2E-41 T 13-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Theam_0838 0381c2068e3466eac6af713f9fb093af 367 Gene3D G3DSA:1.10.150.300 114 203 3.4E-160 T 13-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Theam_0838 0381c2068e3466eac6af713f9fb093af 367 Gene3D G3DSA:3.10.20.30 49 365 3.4E-160 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Theam_0838 0381c2068e3466eac6af713f9fb093af 367 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 367 8.2E-163 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Theam_0838 0381c2068e3466eac6af713f9fb093af 367 SUPERFAMILY SSF81271 283 364 2.83E-36 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Theam_0838 0381c2068e3466eac6af713f9fb093af 367 PIRSF PIRSF006641 1 367 6.1E-167 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Theam_0838 0381c2068e3466eac6af713f9fb093af 367 Gene3D G3DSA:3.40.50.300 4 282 3.4E-160 T 13-10-2018 Theam_0838 0381c2068e3466eac6af713f9fb093af 367 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 367 46.829 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Theam_0838 0381c2068e3466eac6af713f9fb093af 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 2.1E-36 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_0838 0381c2068e3466eac6af713f9fb093af 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 2.1E-36 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_0838 0381c2068e3466eac6af713f9fb093af 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.1E-36 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_0838 0381c2068e3466eac6af713f9fb093af 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 2.1E-36 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_0838 0381c2068e3466eac6af713f9fb093af 367 Pfam PF01926 50S ribosome-binding GTPase 5 127 1.2E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_0721 60f2f541534752c37f97a6fd9e016b63 85 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 4 81 21.589 T 13-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Theam_0721 60f2f541534752c37f97a6fd9e016b63 85 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 13 74 7.0E-13 T 13-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Theam_0721 60f2f541534752c37f97a6fd9e016b63 85 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 4 83 7.1E-30 T 13-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Theam_0721 60f2f541534752c37f97a6fd9e016b63 85 SUPERFAMILY SSF82697 3 81 1.13E-27 T 13-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Theam_0721 60f2f541534752c37f97a6fd9e016b63 85 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 6 81 3.7E-31 T 13-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Theam_0721 60f2f541534752c37f97a6fd9e016b63 85 Gene3D G3DSA:3.30.1280.10 3 85 6.9E-32 T 13-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Theam_0361 ab635211da99e92609890c6cc545eafa 223 SMART SM00382 33 221 4.0E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0361 ab635211da99e92609890c6cc545eafa 223 Pfam PF00005 ABC transporter 24 172 3.8E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_0361 ab635211da99e92609890c6cc545eafa 223 SUPERFAMILY SSF52540 4 222 3.12E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0361 ab635211da99e92609890c6cc545eafa 223 Gene3D G3DSA:3.40.50.300 2 223 1.8E-66 T 13-10-2018 Theam_1206 8e8c412f7ed605c595f8ea4881022e48 184 Gene3D G3DSA:3.40.50.10420 2 184 5.1E-54 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Theam_1206 8e8c412f7ed605c595f8ea4881022e48 184 PIRSF PIRSF006806 1 180 1.1E-46 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Theam_1206 8e8c412f7ed605c595f8ea4881022e48 184 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 4 176 6.5E-37 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Theam_1206 8e8c412f7ed605c595f8ea4881022e48 184 SUPERFAMILY SSF100950 3 182 9.35E-48 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Theam_1206 8e8c412f7ed605c595f8ea4881022e48 184 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 4 176 5.3E-47 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Theam_0132 6a51c56f084c2780cd8bab572520acc5 200 Pfam PF01725 Ham1 family 3 192 4.9E-53 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Theam_0132 6a51c56f084c2780cd8bab572520acc5 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 6.0E-52 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Theam_0132 6a51c56f084c2780cd8bab572520acc5 200 Gene3D G3DSA:3.90.950.10 1 199 2.5E-70 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Theam_0132 6a51c56f084c2780cd8bab572520acc5 200 SUPERFAMILY SSF52972 2 196 2.07E-62 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Theam_0132 6a51c56f084c2780cd8bab572520acc5 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 1 196 45.201 T 13-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Theam_0758 a9b5798d89f52afc93491c404c289101 282 SUPERFAMILY SSF56317 1 262 6.8E-62 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Theam_0758 a9b5798d89f52afc93491c404c289101 282 Gene3D G3DSA:3.60.110.10 1 273 2.6E-71 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Theam_0758 a9b5798d89f52afc93491c404c289101 282 Pfam PF00795 Carbon-nitrogen hydrolase 2 254 1.2E-30 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Theam_1387 438b3754cf61056cd5b70c8e61bee77b 222 SUPERFAMILY SSF141371 131 209 4.12E-6 T 13-10-2018 Theam_1387 438b3754cf61056cd5b70c8e61bee77b 222 Pfam PF07238 PilZ domain 105 207 4.0E-15 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Theam_1387 438b3754cf61056cd5b70c8e61bee77b 222 Gene3D G3DSA:2.40.10.220 105 212 7.4E-17 T 13-10-2018 Theam_0077 f2fa8071be066de1fb53244271d17388 268 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 165 180 3.8E-8 T 13-10-2018 Theam_0077 f2fa8071be066de1fb53244271d17388 268 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 28 50 3.8E-8 T 13-10-2018 Theam_0077 f2fa8071be066de1fb53244271d17388 268 TIGRFAM TIGR00292 TIGR00292: thiazole biosynthesis enzyme 7 262 2.8E-88 T 13-10-2018 IPR002922 Thiazole biosynthetic enzyme Thi4 family Theam_0077 f2fa8071be066de1fb53244271d17388 268 Pfam PF01946 Thi4 family 10 244 2.1E-78 T 13-10-2018 Theam_0077 f2fa8071be066de1fb53244271d17388 268 SUPERFAMILY SSF51905 5 258 1.9E-42 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0077 f2fa8071be066de1fb53244271d17388 268 Hamap MF_00304 Thiamine thiazole synthase [thi4]. 4 263 40.99 T 13-10-2018 IPR022828 Thiazole biosynthetic enzyme, prokaryotic Theam_0077 f2fa8071be066de1fb53244271d17388 268 Gene3D G3DSA:3.50.50.60 2 266 5.4E-93 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0881 240dd04ff60e1a686a111c26c2019c2d 396 Pfam PF12704 MacB-like periplasmic core domain 17 240 2.7E-34 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Theam_0881 240dd04ff60e1a686a111c26c2019c2d 396 Pfam PF02687 FtsX-like permease family 303 385 3.0E-6 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Theam_0287 811b0970b3bc624878a9db3dc358d0ca 84 Pfam PF03776 Septum formation topological specificity factor MinE 17 82 1.3E-14 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Theam_0287 811b0970b3bc624878a9db3dc358d0ca 84 SUPERFAMILY SSF55229 33 82 1.57E-5 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Theam_0287 811b0970b3bc624878a9db3dc358d0ca 84 Gene3D G3DSA:3.30.1070.10 20 82 2.5E-8 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Theam_0287 811b0970b3bc624878a9db3dc358d0ca 84 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 16 83 6.9E-14 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Theam_0192 8cea1f66d61aa3ffc960f4111d2395d8 250 Pfam PF01497 Periplasmic binding protein 22 207 1.3E-8 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain Theam_0192 8cea1f66d61aa3ffc960f4111d2395d8 250 Gene3D G3DSA:3.40.50.1980 18 132 3.4E-25 T 13-10-2018 Theam_0192 8cea1f66d61aa3ffc960f4111d2395d8 250 Gene3D G3DSA:3.40.50.1980 144 248 5.2E-8 T 13-10-2018 Theam_0192 8cea1f66d61aa3ffc960f4111d2395d8 250 SUPERFAMILY SSF53807 19 244 2.71E-32 T 13-10-2018 Theam_1699 1356256404f65718bbdb7e7378c262bd 159 SUPERFAMILY SSF54523 4 36 5.89E-7 T 13-10-2018 Theam_1699 1356256404f65718bbdb7e7378c262bd 159 Gene3D G3DSA:3.30.700.10 4 50 1.4E-5 T 13-10-2018 Theam_1699 1356256404f65718bbdb7e7378c262bd 159 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 23 2.4E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1699 1356256404f65718bbdb7e7378c262bd 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 22 3.7E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1699 1356256404f65718bbdb7e7378c262bd 159 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 2 22 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1257 4e8687947ae0b2b70da3fbe3e0d0da76 179 Gene3D G3DSA:1.20.120.1760 3 171 1.3E-10 T 13-10-2018 Theam_1257 4e8687947ae0b2b70da3fbe3e0d0da76 179 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 45 67 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Theam_1257 4e8687947ae0b2b70da3fbe3e0d0da76 179 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 67 4.6E-18 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Theam_1257 4e8687947ae0b2b70da3fbe3e0d0da76 179 PIRSF PIRSF000847 1 179 2.3E-42 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Theam_1257 4e8687947ae0b2b70da3fbe3e0d0da76 179 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 174 3.8E-32 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Theam_0958 2a8e3c01f10debda6345ab20cb48b183 364 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 362 30.838 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Theam_0958 2a8e3c01f10debda6345ab20cb48b183 364 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 139 1.2E-27 T 13-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Theam_0958 2a8e3c01f10debda6345ab20cb48b183 364 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 2 355 7.7E-79 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Theam_0958 2a8e3c01f10debda6345ab20cb48b183 364 Gene3D G3DSA:3.40.50.2000 4 352 3.4E-95 T 13-10-2018 Theam_0958 2a8e3c01f10debda6345ab20cb48b183 364 Gene3D G3DSA:3.40.50.2000 160 346 3.4E-95 T 13-10-2018 Theam_0958 2a8e3c01f10debda6345ab20cb48b183 364 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 190 332 4.1E-28 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Theam_0958 2a8e3c01f10debda6345ab20cb48b183 364 SUPERFAMILY SSF53756 2 358 3.59E-91 T 13-10-2018 Theam_1464 94e4da36e62b879187d8373570488491 266 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 264 1.1E-108 T 13-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 Theam_1464 94e4da36e62b879187d8373570488491 266 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Theam_1464 94e4da36e62b879187d8373570488491 266 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 186 264 5.4E-26 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Theam_1464 94e4da36e62b879187d8373570488491 266 SUPERFAMILY SSF117143 92 226 5.1E-37 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Theam_1464 94e4da36e62b879187d8373570488491 266 Pfam PF00460 Flagella basal body rod protein 5 35 5.9E-15 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Theam_1464 94e4da36e62b879187d8373570488491 266 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 247 2.9E-32 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Theam_1464 94e4da36e62b879187d8373570488491 266 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 8.0E-53 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Theam_0938 0b2f1ed409a3c92df38cbd0967a7c0b9 450 SUPERFAMILY SSF50621 290 444 1.44E-30 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Theam_0938 0b2f1ed409a3c92df38cbd0967a7c0b9 450 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 59 310 2.6E-37 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Theam_0938 0b2f1ed409a3c92df38cbd0967a7c0b9 450 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 311 397 5.6E-11 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Theam_0938 0b2f1ed409a3c92df38cbd0967a7c0b9 450 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 246 259 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Theam_0938 0b2f1ed409a3c92df38cbd0967a7c0b9 450 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 207 220 2.1E-6 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Theam_0938 0b2f1ed409a3c92df38cbd0967a7c0b9 450 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 81 99 2.1E-6 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Theam_0938 0b2f1ed409a3c92df38cbd0967a7c0b9 450 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 301 320 2.1E-6 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Theam_0938 0b2f1ed409a3c92df38cbd0967a7c0b9 450 Gene3D G3DSA:3.20.20.10 56 306 2.3E-107 T 13-10-2018 IPR029066 PLP-binding barrel Theam_0938 0b2f1ed409a3c92df38cbd0967a7c0b9 450 Gene3D G3DSA:2.40.37.10 35 438 2.3E-107 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Theam_0938 0b2f1ed409a3c92df38cbd0967a7c0b9 450 SUPERFAMILY SSF51419 48 313 1.2E-58 T 13-10-2018 IPR029066 PLP-binding barrel Theam_0087 6a7744a85c43e83eafb9359b5abf9258 58 PRINTS PR00352 3Fe-4S ferredoxin signature 5 16 3.1E-5 T 13-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Theam_0087 6a7744a85c43e83eafb9359b5abf9258 58 PRINTS PR00352 3Fe-4S ferredoxin signature 43 55 3.1E-5 T 13-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Theam_0087 6a7744a85c43e83eafb9359b5abf9258 58 PRINTS PR00352 3Fe-4S ferredoxin signature 16 26 3.1E-5 T 13-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Theam_0087 6a7744a85c43e83eafb9359b5abf9258 58 Pfam PF12838 4Fe-4S dicluster domain 10 54 2.6E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_0087 6a7744a85c43e83eafb9359b5abf9258 58 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0087 6a7744a85c43e83eafb9359b5abf9258 58 SUPERFAMILY SSF54862 4 56 9.87E-22 T 13-10-2018 Theam_0087 6a7744a85c43e83eafb9359b5abf9258 58 Gene3D G3DSA:3.30.70.20 1 29 8.2E-9 T 13-10-2018 Theam_0087 6a7744a85c43e83eafb9359b5abf9258 58 Gene3D G3DSA:3.30.70.20 30 58 8.3E-7 T 13-10-2018 Theam_1436 2a7e575392bcab0065254403c7ca3c02 221 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 33 160 5.7E-19 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Theam_1436 2a7e575392bcab0065254403c7ca3c02 221 PIRSF PIRSF001435 3 221 2.9E-72 T 13-10-2018 Theam_1436 2a7e575392bcab0065254403c7ca3c02 221 Gene3D G3DSA:1.10.1670.10 135 221 1.6E-13 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Theam_1436 2a7e575392bcab0065254403c7ca3c02 221 SMART SM00478 37 198 8.7E-34 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Theam_1436 2a7e575392bcab0065254403c7ca3c02 221 Gene3D G3DSA:1.10.340.30 20 134 2.4E-38 T 13-10-2018 Theam_1436 2a7e575392bcab0065254403c7ca3c02 221 SUPERFAMILY SSF48150 8 217 1.33E-56 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Theam_0279 44511e4d503771f05371182f1e3234ca 256 Pfam PF00557 Metallopeptidase family M24 18 247 4.5E-50 T 13-10-2018 IPR000994 Peptidase M24 Theam_0279 44511e4d503771f05371182f1e3234ca 256 SUPERFAMILY SSF55920 9 254 1.31E-81 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like Theam_0279 44511e4d503771f05371182f1e3234ca 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 198 210 2.5E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Theam_0279 44511e4d503771f05371182f1e3234ca 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 166 178 2.5E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Theam_0279 44511e4d503771f05371182f1e3234ca 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 2.5E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Theam_0279 44511e4d503771f05371182f1e3234ca 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 73 86 2.5E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Theam_0279 44511e4d503771f05371182f1e3234ca 256 Gene3D G3DSA:3.90.230.10 2 255 7.4E-97 T 13-10-2018 Theam_0279 44511e4d503771f05371182f1e3234ca 256 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 172 190 - T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Theam_0279 44511e4d503771f05371182f1e3234ca 256 Hamap MF_01974 Methionine aminopeptidase [map]. 8 256 39.623 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Theam_0279 44511e4d503771f05371182f1e3234ca 256 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 8 255 2.0E-91 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Theam_0093 2fdec28538a58b2e63406cf73da84858 656 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 4 173 2.8E-52 T 13-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Theam_0093 2fdec28538a58b2e63406cf73da84858 656 Pfam PF01968 Hydantoinase/oxoprolinase 192 473 1.2E-104 T 13-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Theam_1131 8c69c0a14feecce8058a0a873d6b17ca 413 Gene3D G3DSA:2.40.420.20 33 44 1.3E-14 T 13-10-2018 Theam_1131 8c69c0a14feecce8058a0a873d6b17ca 413 Gene3D G3DSA:1.10.287.470 93 124 1.3E-14 T 13-10-2018 Theam_1131 8c69c0a14feecce8058a0a873d6b17ca 413 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 203 406 2.0E-33 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Theam_1131 8c69c0a14feecce8058a0a873d6b17ca 413 Gene3D G3DSA:2.40.50.100 199 265 9.1E-8 T 13-10-2018 Theam_1131 8c69c0a14feecce8058a0a873d6b17ca 413 Gene3D G3DSA:2.40.420.20 347 410 1.2E-11 T 13-10-2018 Theam_1131 8c69c0a14feecce8058a0a873d6b17ca 413 SUPERFAMILY SSF111369 59 145 8.37E-10 T 13-10-2018 Theam_1131 8c69c0a14feecce8058a0a873d6b17ca 413 SUPERFAMILY SSF111369 196 298 4.84E-9 T 13-10-2018 Theam_1131 8c69c0a14feecce8058a0a873d6b17ca 413 Pfam PF00529 HlyD membrane-fusion protein of T1SS 13 407 7.3E-13 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Theam_1131 8c69c0a14feecce8058a0a873d6b17ca 413 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 313 1.2E-15 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Theam_1131 8c69c0a14feecce8058a0a873d6b17ca 413 Gene3D G3DSA:1.10.287.470 127 198 2.2E-8 T 13-10-2018 Theam_1131 8c69c0a14feecce8058a0a873d6b17ca 413 Gene3D G3DSA:2.40.50.100 59 92 1.3E-14 T 13-10-2018 Theam_1131 8c69c0a14feecce8058a0a873d6b17ca 413 Gene3D G3DSA:2.40.30.170 45 58 1.3E-14 T 13-10-2018 Theam_1131 8c69c0a14feecce8058a0a873d6b17ca 413 Gene3D G3DSA:2.40.30.170 266 346 2.3E-18 T 13-10-2018 Theam_1014 18fc85cd902d2e64c4630e9024fb4fc1 137 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 8 137 8.2E-38 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Theam_1014 18fc85cd902d2e64c4630e9024fb4fc1 137 Pfam PF01894 Uncharacterised protein family UPF0047 21 134 2.4E-37 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Theam_1014 18fc85cd902d2e64c4630e9024fb4fc1 137 Gene3D G3DSA:2.60.120.460 1 137 1.3E-52 T 13-10-2018 IPR035917 YjbQ-like superfamily Theam_1014 18fc85cd902d2e64c4630e9024fb4fc1 137 SUPERFAMILY SSF111038 1 137 3.53E-47 T 13-10-2018 IPR035917 YjbQ-like superfamily Theam_1014 18fc85cd902d2e64c4630e9024fb4fc1 137 PIRSF PIRSF004681 1 137 4.9E-42 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Theam_0293 1c730a9e82281208c270b47983248baf 311 Pfam PF01758 Sodium Bile acid symporter family 35 211 2.0E-32 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Theam_0293 1c730a9e82281208c270b47983248baf 311 Gene3D G3DSA:1.20.1530.20 1 304 1.7E-81 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily Theam_0704 d76f838d23e2bba727d37f5107fb541f 369 Gene3D G3DSA:3.40.640.10 44 270 1.4E-112 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Theam_0704 d76f838d23e2bba727d37f5107fb541f 369 Gene3D G3DSA:3.90.1150.10 21 352 1.4E-112 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Theam_0704 d76f838d23e2bba727d37f5107fb541f 369 Pfam PF00155 Aminotransferase class I and II 31 350 4.9E-52 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Theam_0704 d76f838d23e2bba727d37f5107fb541f 369 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 3 362 58.128 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Theam_0704 d76f838d23e2bba727d37f5107fb541f 369 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 361 1.7E-103 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Theam_0704 d76f838d23e2bba727d37f5107fb541f 369 SUPERFAMILY SSF53383 22 362 2.25E-77 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 Gene3D G3DSA:1.10.8.60 274 342 1.3E-20 T 13-10-2018 Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 Gene3D G3DSA:3.30.300.180 1 78 3.1E-8 T 13-10-2018 IPR038454 DnaA, N-terminal domain superfamily Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 444 2.7E-158 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 SMART SM00760 356 425 8.8E-26 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 359 425 5.2E-23 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 Pfam PF00308 Bacterial dnaA protein 108 324 6.8E-98 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 Gene3D G3DSA:3.40.50.300 92 272 2.8E-58 T 13-10-2018 Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 SUPERFAMILY SSF48295 350 446 8.63E-28 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 Gene3D G3DSA:1.10.1750.10 345 450 1.6E-29 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 141 161 7.1E-48 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 406 425 7.1E-48 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 173 187 7.1E-48 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 239 266 7.1E-48 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 205 219 7.1E-48 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 SMART SM00382 140 268 2.0E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 SUPERFAMILY SSF52540 107 317 6.74E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0006 969ac6367d4cafd0a56a277037b2c477 471 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 447 30.966 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Theam_0060 cb4adae7f10c4d218bfa059cd80aa970 1013 Pfam PF10145 Phage-related minor tail protein 120 299 5.6E-9 T 13-10-2018 IPR010090 Phage tail tape measure protein Theam_0517 f56b1372f94dec08f429b58b8f0ea698 410 Gene3D G3DSA:2.40.30.10 322 403 1.7E-7 T 13-10-2018 Theam_0517 f56b1372f94dec08f429b58b8f0ea698 410 SUPERFAMILY SSF51395 14 148 7.69E-6 T 13-10-2018 Theam_0517 f56b1372f94dec08f429b58b8f0ea698 410 Pfam PF01136 Peptidase family U32 76 308 2.9E-100 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Theam_0517 f56b1372f94dec08f429b58b8f0ea698 410 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Theam_0517 f56b1372f94dec08f429b58b8f0ea698 410 Pfam PF16325 Peptidase family U32 C-terminal domain 321 400 1.6E-8 T 13-10-2018 IPR032525 Peptidase family U32, C-terminal Theam_0429 760a51cf1f0f21e217bfa9c5f6ca2741 390 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 390 133.099 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Theam_0429 760a51cf1f0f21e217bfa9c5f6ca2741 390 Gene3D G3DSA:3.60.70.12 4 262 1.3E-89 T 13-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Theam_0429 760a51cf1f0f21e217bfa9c5f6ca2741 390 Pfam PF01960 ArgJ family 16 390 1.9E-139 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Theam_0429 760a51cf1f0f21e217bfa9c5f6ca2741 390 Gene3D G3DSA:3.10.20.340 263 390 4.8E-45 T 13-10-2018 Theam_0429 760a51cf1f0f21e217bfa9c5f6ca2741 390 SUPERFAMILY SSF56266 10 387 1.83E-128 T 13-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Theam_0429 760a51cf1f0f21e217bfa9c5f6ca2741 390 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 5 390 4.9E-126 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Theam_0429 760a51cf1f0f21e217bfa9c5f6ca2741 390 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 25 390 7.0E-86 T 13-10-2018 Theam_0859 69bfab05734ee9ee576b801d49d2ec14 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 2.8E-16 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Theam_0859 69bfab05734ee9ee576b801d49d2ec14 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 5.8E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Theam_0859 69bfab05734ee9ee576b801d49d2ec14 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 5.8E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Theam_0859 69bfab05734ee9ee576b801d49d2ec14 183 SUPERFAMILY SSF46689 3 60 1.28E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Theam_0859 69bfab05734ee9ee576b801d49d2ec14 183 Gene3D G3DSA:1.10.357.10 1 181 6.0E-27 T 13-10-2018 Theam_0239 90ce5ef47faef33e0136ee82199a8a0e 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.4E-13 T 13-10-2018 Theam_0239 90ce5ef47faef33e0136ee82199a8a0e 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 1.4E-13 T 13-10-2018 Theam_0239 90ce5ef47faef33e0136ee82199a8a0e 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.4E-13 T 13-10-2018 Theam_0239 90ce5ef47faef33e0136ee82199a8a0e 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 7.1E-7 T 13-10-2018 Theam_0239 90ce5ef47faef33e0136ee82199a8a0e 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 7.1E-7 T 13-10-2018 Theam_0239 90ce5ef47faef33e0136ee82199a8a0e 189 Pfam PF00117 Glutamine amidotransferase class-I 4 186 3.9E-57 T 13-10-2018 IPR017926 Glutamine amidotransferase Theam_0239 90ce5ef47faef33e0136ee82199a8a0e 189 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.5E-35 T 13-10-2018 Theam_0239 90ce5ef47faef33e0136ee82199a8a0e 189 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.5E-35 T 13-10-2018 Theam_0239 90ce5ef47faef33e0136ee82199a8a0e 189 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.5E-35 T 13-10-2018 Theam_0239 90ce5ef47faef33e0136ee82199a8a0e 189 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.5E-35 T 13-10-2018 Theam_0239 90ce5ef47faef33e0136ee82199a8a0e 189 PRINTS PR00097 Anthranilate synthase component II signature 165 178 2.5E-35 T 13-10-2018 Theam_0239 90ce5ef47faef33e0136ee82199a8a0e 189 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.5E-35 T 13-10-2018 Theam_0239 90ce5ef47faef33e0136ee82199a8a0e 189 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 3.7E-83 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Theam_0239 90ce5ef47faef33e0136ee82199a8a0e 189 SUPERFAMILY SSF52317 1 188 2.29E-58 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Theam_0239 90ce5ef47faef33e0136ee82199a8a0e 189 Gene3D G3DSA:3.40.50.880 1 189 2.2E-65 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Theam_0416 7c229d5c7b7c0e666d666387c468e0c2 271 Gene3D G3DSA:3.20.20.70 5 250 1.9E-52 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0416 7c229d5c7b7c0e666d666387c468e0c2 271 SMART SM00729 33 236 1.2E-4 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_0416 7c229d5c7b7c0e666d666387c468e0c2 271 Pfam PF04055 Radical SAM superfamily 38 196 2.4E-17 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0416 7c229d5c7b7c0e666d666387c468e0c2 271 SUPERFAMILY SSF102114 28 242 1.44E-20 T 13-10-2018 Theam_1211 ac91e80d83e24cfa49624c86373818f2 394 Gene3D G3DSA:3.30.470.20 196 393 9.7E-67 T 13-10-2018 Theam_1211 ac91e80d83e24cfa49624c86373818f2 394 Gene3D G3DSA:3.30.1490.20 122 195 1.3E-29 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Theam_1211 ac91e80d83e24cfa49624c86373818f2 394 Pfam PF02222 ATP-grasp domain 122 295 7.2E-57 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Theam_1211 ac91e80d83e24cfa49624c86373818f2 394 SUPERFAMILY SSF56059 119 384 2.29E-61 T 13-10-2018 Theam_1211 ac91e80d83e24cfa49624c86373818f2 394 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 7 391 52.127 T 13-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 Theam_1211 ac91e80d83e24cfa49624c86373818f2 394 Gene3D G3DSA:3.40.50.20 1 121 5.6E-51 T 13-10-2018 Theam_1211 ac91e80d83e24cfa49624c86373818f2 394 SUPERFAMILY SSF52440 3 111 2.16E-32 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Theam_1211 ac91e80d83e24cfa49624c86373818f2 394 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 13 390 6.1E-178 T 13-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 Theam_0377 ee23062e7efeaf43ba0a4beb2de50027 349 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 9 343 41.83 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Theam_0377 ee23062e7efeaf43ba0a4beb2de50027 349 SMART SM00859 10 153 6.2E-52 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Theam_0377 ee23062e7efeaf43ba0a4beb2de50027 349 SUPERFAMILY SSF55347 161 317 5.89E-47 T 13-10-2018 Theam_0377 ee23062e7efeaf43ba0a4beb2de50027 349 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 184 318 3.1E-14 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Theam_0377 ee23062e7efeaf43ba0a4beb2de50027 349 Gene3D G3DSA:3.40.50.720 10 335 2.7E-125 T 13-10-2018 Theam_0377 ee23062e7efeaf43ba0a4beb2de50027 349 Gene3D G3DSA:3.30.360.10 159 317 2.7E-125 T 13-10-2018 Theam_0377 ee23062e7efeaf43ba0a4beb2de50027 349 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 9 345 2.1E-123 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Theam_0377 ee23062e7efeaf43ba0a4beb2de50027 349 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 10 152 3.1E-31 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Theam_0377 ee23062e7efeaf43ba0a4beb2de50027 349 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 156 172 - T 13-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Theam_0377 ee23062e7efeaf43ba0a4beb2de50027 349 SUPERFAMILY SSF51735 9 187 1.87E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_1246 efc62746cc4805f944d1e1d950f0c729 272 Gene3D G3DSA:1.10.166.10 1 67 6.5E-22 T 13-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 Theam_1246 efc62746cc4805f944d1e1d950f0c729 272 Gene3D G3DSA:2.160.10.10 83 252 8.0E-50 T 13-10-2018 Theam_1246 efc62746cc4805f944d1e1d950f0c729 272 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 166 200 2.0E-11 T 13-10-2018 IPR001451 Hexapeptide repeat Theam_1246 efc62746cc4805f944d1e1d950f0c729 272 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 157 3.3E-5 T 13-10-2018 IPR001451 Hexapeptide repeat Theam_1246 efc62746cc4805f944d1e1d950f0c729 272 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 66 1.8E-21 T 13-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 Theam_1246 efc62746cc4805f944d1e1d950f0c729 272 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 125 153 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Theam_1246 efc62746cc4805f944d1e1d950f0c729 272 SUPERFAMILY SSF51161 5 249 3.33E-61 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 Gene3D G3DSA:3.30.56.10 5 183 6.3E-69 T 13-10-2018 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 SUPERFAMILY SSF46955 406 478 3.39E-15 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 44.099 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 SMART SM00873 216 389 6.6E-89 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 SMART SM00896 702 793 1.7E-45 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 Pfam PF01588 Putative tRNA binding domain 46 140 5.0E-21 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 793 1.5E-261 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 SUPERFAMILY SSF54991 697 793 1.83E-29 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 Gene3D G3DSA:2.40.50.140 40 156 6.3E-69 T 13-10-2018 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 SUPERFAMILY SSF50249 41 194 2.23E-44 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 SUPERFAMILY SSF56037 205 398 3.66E-71 T 13-10-2018 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 Gene3D G3DSA:3.30.70.380 703 794 1.3E-31 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 SMART SM00874 406 475 7.8E-24 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 Gene3D G3DSA:3.30.56.10 406 479 1.4E-20 T 13-10-2018 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 Pfam PF03147 Ferredoxin-fold anticodon binding domain 702 793 5.9E-30 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 Pfam PF03484 tRNA synthetase B5 domain 410 474 6.4E-18 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 Pfam PF03483 B3/4 domain 216 388 1.4E-66 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 SUPERFAMILY SSF55681 471 688 2.24E-44 T 13-10-2018 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 Gene3D G3DSA:3.30.930.10 496 690 1.6E-58 T 13-10-2018 Theam_1204 452908c413ca4cf9c8e7bbbbccbe6975 794 Gene3D G3DSA:3.50.40.10 200 399 8.8E-82 T 13-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Theam_0091 e3fe30d9ecf088aafa33058b3da375e9 287 Gene3D G3DSA:3.40.50.10490 48 252 1.4E-93 T 13-10-2018 Theam_0091 e3fe30d9ecf088aafa33058b3da375e9 287 Pfam PF00318 Ribosomal protein S2 47 262 5.6E-98 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0091 e3fe30d9ecf088aafa33058b3da375e9 287 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 44 55 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Theam_0091 e3fe30d9ecf088aafa33058b3da375e9 287 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 196 220 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Theam_0091 e3fe30d9ecf088aafa33058b3da375e9 287 PRINTS PR00395 Ribosomal protein S2 signature 125 142 2.2E-39 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0091 e3fe30d9ecf088aafa33058b3da375e9 287 PRINTS PR00395 Ribosomal protein S2 signature 75 84 2.2E-39 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0091 e3fe30d9ecf088aafa33058b3da375e9 287 PRINTS PR00395 Ribosomal protein S2 signature 44 62 2.2E-39 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0091 e3fe30d9ecf088aafa33058b3da375e9 287 PRINTS PR00395 Ribosomal protein S2 signature 213 224 2.2E-39 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0091 e3fe30d9ecf088aafa33058b3da375e9 287 PRINTS PR00395 Ribosomal protein S2 signature 234 248 2.2E-39 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0091 e3fe30d9ecf088aafa33058b3da375e9 287 PRINTS PR00395 Ribosomal protein S2 signature 196 213 2.2E-39 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0091 e3fe30d9ecf088aafa33058b3da375e9 287 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 42 264 3.3E-107 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0091 e3fe30d9ecf088aafa33058b3da375e9 287 Gene3D G3DSA:1.10.287.610 135 190 1.4E-93 T 13-10-2018 Theam_0091 e3fe30d9ecf088aafa33058b3da375e9 287 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 40 263 42.949 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0091 e3fe30d9ecf088aafa33058b3da375e9 287 SUPERFAMILY SSF52313 44 268 4.19E-97 T 13-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Theam_1467 066a3137fead676a46f58fb0f0c5e2a7 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 82 98 7.8E-14 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Theam_1467 066a3137fead676a46f58fb0f0c5e2a7 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 107 126 7.8E-14 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Theam_1467 066a3137fead676a46f58fb0f0c5e2a7 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 7.8E-14 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Theam_1467 066a3137fead676a46f58fb0f0c5e2a7 347 PRINTS PR00955 Flagellar motor switch protein FliM signature 204 222 7.8E-14 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Theam_1467 066a3137fead676a46f58fb0f0c5e2a7 347 Pfam PF02154 Flagellar motor switch protein FliM 31 221 2.0E-40 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Theam_1467 066a3137fead676a46f58fb0f0c5e2a7 347 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 242 311 2.2E-14 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) Theam_1467 066a3137fead676a46f58fb0f0c5e2a7 347 PIRSF PIRSF002888 2 319 3.6E-68 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Theam_1467 066a3137fead676a46f58fb0f0c5e2a7 347 SUPERFAMILY SSF101801 241 316 5.1E-12 T 13-10-2018 IPR036429 SpoA-like superfamily Theam_1467 066a3137fead676a46f58fb0f0c5e2a7 347 SUPERFAMILY SSF103039 71 221 4.45E-15 T 13-10-2018 IPR028976 CheC-like superfamily Theam_1467 066a3137fead676a46f58fb0f0c5e2a7 347 Gene3D G3DSA:3.40.1550.10 37 222 2.5E-40 T 13-10-2018 IPR028976 CheC-like superfamily Theam_1467 066a3137fead676a46f58fb0f0c5e2a7 347 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 308 3.5E-66 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Theam_1110 6c8555e404b33ccb94ca2082c967d1c4 352 SUPERFAMILY SSF53955 81 217 3.52E-39 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Theam_1110 6c8555e404b33ccb94ca2082c967d1c4 352 Gene3D G3DSA:1.10.530.10 78 226 1.2E-34 T 13-10-2018 Theam_1110 6c8555e404b33ccb94ca2082c967d1c4 352 Pfam PF01464 Transglycosylase SLT domain 95 190 4.6E-28 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Theam_1110 6c8555e404b33ccb94ca2082c967d1c4 352 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 101 129 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Theam_1557 7167fa59ee2cc086adb0e5e89f678179 90 Pfam PF14542 GCN5-related N-acetyl-transferase 14 82 1.1E-17 T 13-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase Theam_1557 7167fa59ee2cc086adb0e5e89f678179 90 Gene3D G3DSA:3.40.630.30 2 87 2.9E-19 T 13-10-2018 Theam_1557 7167fa59ee2cc086adb0e5e89f678179 90 SUPERFAMILY SSF55729 12 82 9.75E-19 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Theam_0931 307acb813dc6f4276224d56fae6be62d 317 Gene3D G3DSA:1.20.1260.10 40 215 4.3E-66 T 13-10-2018 IPR012347 Ferritin-like Theam_0931 307acb813dc6f4276224d56fae6be62d 317 Pfam PF09968 Uncharacterized protein domain (DUF2202) 46 207 2.0E-65 T 13-10-2018 IPR019243 Domain of unknown function DUF2202 Theam_0931 307acb813dc6f4276224d56fae6be62d 317 SUPERFAMILY SSF47240 47 187 2.76E-11 T 13-10-2018 IPR009078 Ferritin-like superfamily Theam_0963 b3dc7058c6664b9eefaee6a2e46bb34c 414 Pfam PF13145 PPIC-type PPIASE domain 254 333 1.6E-8 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Theam_0963 b3dc7058c6664b9eefaee6a2e46bb34c 414 Gene3D G3DSA:3.10.50.40 272 360 5.1E-8 T 13-10-2018 Theam_0963 b3dc7058c6664b9eefaee6a2e46bb34c 414 SUPERFAMILY SSF109998 28 142 8.63E-5 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Theam_0963 b3dc7058c6664b9eefaee6a2e46bb34c 414 SUPERFAMILY SSF109998 176 300 1.61E-10 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Theam_0963 b3dc7058c6664b9eefaee6a2e46bb34c 414 Gene3D G3DSA:1.10.4030.30 226 402 5.1E-8 T 13-10-2018 Theam_0612 3d9a97878d111cc431e1573bbd17f94f 236 SUPERFAMILY SSF69065 6 153 4.84E-50 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Theam_0612 3d9a97878d111cc431e1573bbd17f94f 236 Hamap MF_00104 Ribonuclease 3 [rnc]. 10 225 31.157 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Theam_0612 3d9a97878d111cc431e1573bbd17f94f 236 SMART SM00535 22 155 5.9E-51 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Theam_0612 3d9a97878d111cc431e1573bbd17f94f 236 SUPERFAMILY SSF54768 115 232 1.13E-29 T 13-10-2018 Theam_0612 3d9a97878d111cc431e1573bbd17f94f 236 SMART SM00358 163 229 5.3E-23 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain Theam_0612 3d9a97878d111cc431e1573bbd17f94f 236 Pfam PF00035 Double-stranded RNA binding motif 164 228 2.9E-14 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain Theam_0612 3d9a97878d111cc431e1573bbd17f94f 236 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 11 228 1.9E-78 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Theam_0612 3d9a97878d111cc431e1573bbd17f94f 236 Gene3D G3DSA:3.30.160.20 161 229 6.9E-25 T 13-10-2018 Theam_0612 3d9a97878d111cc431e1573bbd17f94f 236 Gene3D G3DSA:1.10.1520.10 7 153 9.2E-47 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Theam_0612 3d9a97878d111cc431e1573bbd17f94f 236 Pfam PF14622 Ribonuclease-III-like 20 150 9.3E-39 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Theam_1400 3326777a3b8bc75c92505d8513e7cb9f 436 SUPERFAMILY SSF109998 42 252 4.84E-31 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Theam_1400 3326777a3b8bc75c92505d8513e7cb9f 436 Gene3D G3DSA:1.10.4030.30 43 204 1.5E-20 T 13-10-2018 Theam_1400 3326777a3b8bc75c92505d8513e7cb9f 436 Pfam PF13624 SurA N-terminal domain 1 163 4.5E-47 T 13-10-2018 Theam_0079 1ae20540eaf177b5f3afa8152b255549 406 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 19 386 4.8E-121 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 Theam_0079 1ae20540eaf177b5f3afa8152b255549 406 SUPERFAMILY SSF53187 8 400 3.29E-84 T 13-10-2018 Theam_0079 1ae20540eaf177b5f3afa8152b255549 406 PIRSF PIRSF005962 3 402 4.3E-135 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 Theam_0079 1ae20540eaf177b5f3afa8152b255549 406 SUPERFAMILY SSF55031 193 306 2.22E-33 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Theam_0079 1ae20540eaf177b5f3afa8152b255549 406 Gene3D G3DSA:3.40.630.10 19 383 2.9E-142 T 13-10-2018 Theam_0079 1ae20540eaf177b5f3afa8152b255549 406 Pfam PF07687 Peptidase dimerisation domain 196 293 3.4E-15 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain Theam_0079 1ae20540eaf177b5f3afa8152b255549 406 Pfam PF01546 Peptidase family M20/M25/M40 79 393 3.0E-36 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 Theam_0079 1ae20540eaf177b5f3afa8152b255549 406 Gene3D G3DSA:3.30.70.360 191 305 2.9E-142 T 13-10-2018 Theam_1392 cdb27e094c44489b8d531547f7da5c0c 326 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 60 228 1.2E-25 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Theam_1392 cdb27e094c44489b8d531547f7da5c0c 326 Gene3D G3DSA:3.40.50.970 16 106 5.5E-11 T 13-10-2018 Theam_1392 cdb27e094c44489b8d531547f7da5c0c 326 Gene3D G3DSA:3.40.50.970 107 322 1.7E-72 T 13-10-2018 Theam_1392 cdb27e094c44489b8d531547f7da5c0c 326 SUPERFAMILY SSF52518 22 322 7.62E-84 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Theam_0135 533412f3c4a6abb53d6290424e49a783 717 Gene3D G3DSA:3.30.460.10 193 325 5.5E-50 T 13-10-2018 Theam_0135 533412f3c4a6abb53d6290424e49a783 717 Pfam PF02824 TGS domain 388 447 1.2E-23 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Theam_0135 533412f3c4a6abb53d6290424e49a783 717 SUPERFAMILY SSF55021 631 709 6.72E-13 T 13-10-2018 Theam_0135 533412f3c4a6abb53d6290424e49a783 717 Gene3D G3DSA:1.10.3210.10 1 191 8.5E-80 T 13-10-2018 Theam_0135 533412f3c4a6abb53d6290424e49a783 717 Pfam PF04607 Region found in RelA / SpoT proteins 236 344 3.8E-37 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 Theam_0135 533412f3c4a6abb53d6290424e49a783 717 SUPERFAMILY SSF81271 375 447 2.18E-23 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Theam_0135 533412f3c4a6abb53d6290424e49a783 717 Gene3D G3DSA:3.10.20.30 381 454 3.3E-32 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Theam_0135 533412f3c4a6abb53d6290424e49a783 717 SMART SM00471 41 153 4.6E-11 T 13-10-2018 IPR003607 HD/PDEase domain Theam_0135 533412f3c4a6abb53d6290424e49a783 717 SUPERFAMILY SSF81301 181 392 1.63E-66 T 13-10-2018 Theam_0135 533412f3c4a6abb53d6290424e49a783 717 SMART SM00954 235 345 5.0E-64 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 Theam_0135 533412f3c4a6abb53d6290424e49a783 717 Pfam PF13328 HD domain 26 175 1.1E-47 T 13-10-2018 IPR003607 HD/PDEase domain Theam_0135 533412f3c4a6abb53d6290424e49a783 717 Gene3D G3DSA:3.30.70.260 631 712 4.2E-18 T 13-10-2018 Theam_0135 533412f3c4a6abb53d6290424e49a783 717 SUPERFAMILY SSF109604 6 190 8.48E-71 T 13-10-2018 Theam_0135 533412f3c4a6abb53d6290424e49a783 717 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 706 2.5E-239 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 Theam_0135 533412f3c4a6abb53d6290424e49a783 717 Pfam PF13291 ACT domain 630 706 9.1E-16 T 13-10-2018 IPR002912 ACT domain Theam_0260 5f03919c1df2f5d73a9d36534278fb48 275 SMART SM01382 124 251 5.9E-99 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Theam_0260 5f03919c1df2f5d73a9d36534278fb48 275 SUPERFAMILY SSF50104 126 269 1.38E-65 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Theam_0260 5f03919c1df2f5d73a9d36534278fb48 275 SMART SM01383 42 118 1.5E-46 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0260 5f03919c1df2f5d73a9d36534278fb48 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 13-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0260 5f03919c1df2f5d73a9d36534278fb48 275 Gene3D G3DSA:4.10.950.10 196 274 2.6E-38 T 13-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0260 5f03919c1df2f5d73a9d36534278fb48 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.7E-34 T 13-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0260 5f03919c1df2f5d73a9d36534278fb48 275 Gene3D G3DSA:2.30.30.30 118 195 1.9E-35 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Theam_0260 5f03919c1df2f5d73a9d36534278fb48 275 PIRSF PIRSF002158 3 274 2.9E-109 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0260 5f03919c1df2f5d73a9d36534278fb48 275 SUPERFAMILY SSF50249 3 125 5.48E-52 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0260 5f03919c1df2f5d73a9d36534278fb48 275 Gene3D G3DSA:2.40.50.140 1 114 2.8E-47 T 13-10-2018 Theam_0260 5f03919c1df2f5d73a9d36534278fb48 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 2.4E-140 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Theam_0260 5f03919c1df2f5d73a9d36534278fb48 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 51.064 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Theam_0260 5f03919c1df2f5d73a9d36534278fb48 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 3.3E-59 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Theam_1581 4ba067bbcf36736619298db69cb5c20c 179 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 2 164 24.192 T 13-10-2018 IPR022973 Ribosomal protein L10 Theam_1581 4ba067bbcf36736619298db69cb5c20c 179 Gene3D G3DSA:3.30.70.1730 1 173 4.7E-40 T 13-10-2018 Theam_1581 4ba067bbcf36736619298db69cb5c20c 179 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 23 143 3.0E-5 T 13-10-2018 Theam_1581 4ba067bbcf36736619298db69cb5c20c 179 Pfam PF00466 Ribosomal protein L10 2 98 1.5E-28 T 13-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Theam_1581 4ba067bbcf36736619298db69cb5c20c 179 SUPERFAMILY SSF160369 3 173 1.1E-49 T 13-10-2018 Theam_0082 96622ffd5a3fa9915dce0d164dae094e 136 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 9 128 1.1E-21 T 13-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 Theam_0082 96622ffd5a3fa9915dce0d164dae094e 136 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 9 130 5.4E-19 T 13-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 Theam_0082 96622ffd5a3fa9915dce0d164dae094e 136 Gene3D G3DSA:1.20.120.330 8 134 6.5E-29 T 13-10-2018 Theam_0082 96622ffd5a3fa9915dce0d164dae094e 136 SUPERFAMILY SSF81593 7 123 1.69E-24 T 13-10-2018 Theam_0700 b8831ff922d2aebc9ffcbb32de2f4138 468 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 71 228 5.3E-34 T 13-10-2018 IPR020051 SagB-type dehydrogenase domain Theam_0700 b8831ff922d2aebc9ffcbb32de2f4138 468 Gene3D G3DSA:3.40.109.10 7 465 3.7E-123 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Theam_0700 b8831ff922d2aebc9ffcbb32de2f4138 468 Pfam PF00881 Nitroreductase family 305 465 5.0E-17 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Theam_0700 b8831ff922d2aebc9ffcbb32de2f4138 468 Pfam PF00881 Nitroreductase family 99 226 6.9E-11 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Theam_0700 b8831ff922d2aebc9ffcbb32de2f4138 468 SUPERFAMILY SSF55469 97 230 1.08E-9 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Theam_0700 b8831ff922d2aebc9ffcbb32de2f4138 468 SUPERFAMILY SSF55469 302 466 3.14E-20 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Theam_0700 b8831ff922d2aebc9ffcbb32de2f4138 468 Gene3D G3DSA:3.40.109.10 23 280 3.7E-123 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Theam_0145 c3376f528fd8f50267ec040951adb2b4 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 473 4.7E-172 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Theam_0145 c3376f528fd8f50267ec040951adb2b4 488 SMART SM01240 8 473 0.0 T 13-10-2018 Theam_0145 c3376f528fd8f50267ec040951adb2b4 488 SUPERFAMILY SSF54631 65 203 2.58E-34 T 13-10-2018 Theam_0145 c3376f528fd8f50267ec040951adb2b4 488 Pfam PF00571 CBS domain 151 201 1.7E-9 T 13-10-2018 IPR000644 CBS domain Theam_0145 c3376f528fd8f50267ec040951adb2b4 488 Pfam PF00571 CBS domain 96 141 1.1E-13 T 13-10-2018 IPR000644 CBS domain Theam_0145 c3376f528fd8f50267ec040951adb2b4 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 9 454 4.5E-204 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Theam_0145 c3376f528fd8f50267ec040951adb2b4 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Theam_0145 c3376f528fd8f50267ec040951adb2b4 488 PIRSF PIRSF000130 1 488 4.9E-221 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Theam_0145 c3376f528fd8f50267ec040951adb2b4 488 Gene3D G3DSA:3.20.20.70 2 486 9.7E-231 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0145 c3376f528fd8f50267ec040951adb2b4 488 SUPERFAMILY SSF51412 4 477 1.57E-132 T 13-10-2018 Theam_0145 c3376f528fd8f50267ec040951adb2b4 488 SMART SM00116 158 206 9.8E-10 T 13-10-2018 IPR000644 CBS domain Theam_0145 c3376f528fd8f50267ec040951adb2b4 488 SMART SM00116 97 145 1.1E-12 T 13-10-2018 IPR000644 CBS domain Theam_0145 c3376f528fd8f50267ec040951adb2b4 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 9 486 89.097 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Theam_0596 da1b055018ac0492df59961c684e9b8a 371 Pfam PF13439 Glycosyltransferase Family 4 12 173 4.6E-19 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Theam_0596 da1b055018ac0492df59961c684e9b8a 371 Pfam PF00534 Glycosyl transferases group 1 182 337 2.5E-31 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Theam_0596 da1b055018ac0492df59961c684e9b8a 371 Gene3D G3DSA:3.40.50.2000 2 183 2.5E-20 T 13-10-2018 Theam_0596 da1b055018ac0492df59961c684e9b8a 371 SUPERFAMILY SSF53756 2 359 6.96E-70 T 13-10-2018 Theam_0596 da1b055018ac0492df59961c684e9b8a 371 Gene3D G3DSA:3.40.50.2000 184 341 1.7E-36 T 13-10-2018 Theam_1261 4718b5d11e013cddae24b06a63b5752c 284 Gene3D G3DSA:3.40.50.720 5 259 8.2E-117 T 13-10-2018 Theam_1261 4718b5d11e013cddae24b06a63b5752c 284 Gene3D G3DSA:3.40.50.10860 7 277 8.2E-117 T 13-10-2018 Theam_1261 4718b5d11e013cddae24b06a63b5752c 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 283 40.157 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Theam_1261 4718b5d11e013cddae24b06a63b5752c 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Theam_1261 4718b5d11e013cddae24b06a63b5752c 284 SUPERFAMILY SSF53223 1 121 1.06E-42 T 13-10-2018 Theam_1261 4718b5d11e013cddae24b06a63b5752c 284 SUPERFAMILY SSF51735 122 280 8.32E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_1261 4718b5d11e013cddae24b06a63b5752c 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 1.6E-43 T 13-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Theam_1261 4718b5d11e013cddae24b06a63b5752c 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 1.8E-69 T 13-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Theam_1261 4718b5d11e013cddae24b06a63b5752c 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 3.7E-85 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Theam_1261 4718b5d11e013cddae24b06a63b5752c 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 156 176 3.7E-85 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Theam_1261 4718b5d11e013cddae24b06a63b5752c 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 3.7E-85 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Theam_1261 4718b5d11e013cddae24b06a63b5752c 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 205 234 3.7E-85 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Theam_1261 4718b5d11e013cddae24b06a63b5752c 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.7E-85 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Theam_1261 4718b5d11e013cddae24b06a63b5752c 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 3.7E-85 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Theam_1261 4718b5d11e013cddae24b06a63b5752c 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.7E-85 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Theam_1190 2d66a84dc2f73288342808a860e368ac 438 Gene3D G3DSA:3.20.140.10 308 368 3.3E-8 T 13-10-2018 Theam_1190 2d66a84dc2f73288342808a860e368ac 438 Gene3D G3DSA:3.20.140.10 2 151 1.1E-50 T 13-10-2018 Theam_1190 2d66a84dc2f73288342808a860e368ac 438 PIRSF PIRSF000484 1 436 2.7E-125 T 13-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Theam_1190 2d66a84dc2f73288342808a860e368ac 438 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 5 358 1.3E-142 T 13-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 Theam_1190 2d66a84dc2f73288342808a860e368ac 438 SUPERFAMILY SSF54675 4 130 1.65E-41 T 13-10-2018 Theam_1190 2d66a84dc2f73288342808a860e368ac 438 Gene3D G3DSA:3.20.20.70 152 307 3.7E-58 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1190 2d66a84dc2f73288342808a860e368ac 438 SUPERFAMILY SSF51690 134 434 1.91E-93 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Theam_1190 2d66a84dc2f73288342808a860e368ac 438 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 150 341 6.2E-16 T 13-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Theam_0610 1aff3cea86bf3ca597d60b33f1ee009b 185 Pfam PF00156 Phosphoribosyl transferase domain 62 157 9.4E-17 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Theam_0610 1aff3cea86bf3ca597d60b33f1ee009b 185 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 16 184 7.6E-66 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Theam_0610 1aff3cea86bf3ca597d60b33f1ee009b 185 Gene3D G3DSA:3.40.50.2020 4 185 1.3E-67 T 13-10-2018 Theam_0610 1aff3cea86bf3ca597d60b33f1ee009b 185 SUPERFAMILY SSF53271 12 184 4.2E-53 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Theam_0610 1aff3cea86bf3ca597d60b33f1ee009b 185 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 16 185 37.156 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Theam_0212 26f9dff54be949e9aa5d5baf91c96bfc 161 Pfam PF01467 Cytidylyltransferase-like 27 117 2.9E-17 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Theam_0212 26f9dff54be949e9aa5d5baf91c96bfc 161 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 14 150 1.2E-55 T 13-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Theam_0212 26f9dff54be949e9aa5d5baf91c96bfc 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 90 1.3E-19 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Theam_0212 26f9dff54be949e9aa5d5baf91c96bfc 161 SUPERFAMILY SSF52374 22 148 5.07E-27 T 13-10-2018 Theam_0212 26f9dff54be949e9aa5d5baf91c96bfc 161 Gene3D G3DSA:3.40.50.620 7 154 7.1E-42 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1041 0f75fd8d9fc223035b8ba375301b6fdf 537 PIRSF PIRSF017184 1 517 8.4E-140 T 13-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 Theam_1041 0f75fd8d9fc223035b8ba375301b6fdf 537 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 5 214 2.1E-45 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Theam_1041 0f75fd8d9fc223035b8ba375301b6fdf 537 Pfam PF03853 YjeF-related protein N-terminus 26 191 5.0E-45 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Theam_1041 0f75fd8d9fc223035b8ba375301b6fdf 537 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 330 340 - T 13-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site Theam_1041 0f75fd8d9fc223035b8ba375301b6fdf 537 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 5 213 26.387 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Theam_1041 0f75fd8d9fc223035b8ba375301b6fdf 537 SUPERFAMILY SSF64153 1 250 1.57E-65 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Theam_1041 0f75fd8d9fc223035b8ba375301b6fdf 537 SUPERFAMILY SSF53613 225 512 9.82E-75 T 13-10-2018 IPR029056 Ribokinase-like Theam_1041 0f75fd8d9fc223035b8ba375301b6fdf 537 Gene3D G3DSA:3.40.50.10260 2 217 2.6E-69 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Theam_1041 0f75fd8d9fc223035b8ba375301b6fdf 537 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 228 515 22.432 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Theam_1041 0f75fd8d9fc223035b8ba375301b6fdf 537 Pfam PF01256 Carbohydrate kinase 251 507 3.6E-57 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Theam_1041 0f75fd8d9fc223035b8ba375301b6fdf 537 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 450 460 - T 13-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site Theam_1041 0f75fd8d9fc223035b8ba375301b6fdf 537 Gene3D G3DSA:3.40.1190.20 226 523 7.8E-87 T 13-10-2018 IPR029056 Ribokinase-like Theam_1041 0f75fd8d9fc223035b8ba375301b6fdf 537 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 232 512 6.2E-66 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Theam_1077 7be9438aa18146fa4b8a7690715e0916 343 Pfam PF04055 Radical SAM superfamily 94 244 2.4E-12 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_1077 7be9438aa18146fa4b8a7690715e0916 343 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 309 7.9E-68 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Theam_1077 7be9438aa18146fa4b8a7690715e0916 343 SUPERFAMILY SSF102114 85 326 8.37E-34 T 13-10-2018 Theam_1077 7be9438aa18146fa4b8a7690715e0916 343 Gene3D G3DSA:3.20.20.70 30 315 1.3E-92 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1077 7be9438aa18146fa4b8a7690715e0916 343 PIRSF PIRSF004911 1 340 1.5E-111 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Theam_1077 7be9438aa18146fa4b8a7690715e0916 343 Pfam PF13394 4Fe-4S single cluster domain 94 150 2.8E-5 T 13-10-2018 Theam_0261 75a3bb1b322caa31dad12a1da5061eca 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.4E-21 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0261 75a3bb1b322caa31dad12a1da5061eca 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.4E-21 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0261 75a3bb1b322caa31dad12a1da5061eca 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.4E-21 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0261 75a3bb1b322caa31dad12a1da5061eca 92 PIRSF PIRSF002144 1 92 1.7E-32 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0261 75a3bb1b322caa31dad12a1da5061eca 92 Gene3D G3DSA:3.30.860.10 1 92 3.5E-39 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0261 75a3bb1b322caa31dad12a1da5061eca 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 89 8.9E-42 T 13-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Theam_0261 75a3bb1b322caa31dad12a1da5061eca 92 SUPERFAMILY SSF54570 3 84 2.49E-33 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0261 75a3bb1b322caa31dad12a1da5061eca 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 13-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0261 75a3bb1b322caa31dad12a1da5061eca 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.275 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0261 75a3bb1b322caa31dad12a1da5061eca 92 Pfam PF00203 Ribosomal protein S19 3 83 1.0E-36 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0983 b92416286159a148c7282cf5318e2b8e 283 Gene3D G3DSA:3.30.420.40 3 278 1.1E-73 T 13-10-2018 Theam_0983 b92416286159a148c7282cf5318e2b8e 283 Gene3D G3DSA:3.30.420.40 112 266 1.1E-73 T 13-10-2018 Theam_0983 b92416286159a148c7282cf5318e2b8e 283 Pfam PF00480 ROK family 3 282 5.6E-59 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Theam_0983 b92416286159a148c7282cf5318e2b8e 283 SUPERFAMILY SSF53067 3 282 2.15E-55 T 13-10-2018 Theam_1550 7a88bfe7efff42faf646d83b762e64d0 309 Gene3D G3DSA:3.40.1190.20 1 309 1.2E-87 T 13-10-2018 IPR029056 Ribokinase-like Theam_1550 7a88bfe7efff42faf646d83b762e64d0 309 SUPERFAMILY SSF53613 1 297 3.74E-64 T 13-10-2018 IPR029056 Ribokinase-like Theam_1550 7a88bfe7efff42faf646d83b762e64d0 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Theam_1550 7a88bfe7efff42faf646d83b762e64d0 309 Pfam PF00294 pfkB family carbohydrate kinase 12 294 4.6E-53 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Theam_1550 7a88bfe7efff42faf646d83b762e64d0 309 PIRSF PIRSF000535 1 308 5.2E-72 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Theam_1550 7a88bfe7efff42faf646d83b762e64d0 309 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 305 7.9E-86 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Theam_1542 e5386bdf80993c8d7b629557b97a9f57 499 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 498 1.8E-34 T 13-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Theam_1542 e5386bdf80993c8d7b629557b97a9f57 499 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 340 352 1.5E-6 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Theam_1542 e5386bdf80993c8d7b629557b97a9f57 499 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 1.5E-6 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Theam_1542 e5386bdf80993c8d7b629557b97a9f57 499 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 316 329 1.5E-6 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Theam_1542 e5386bdf80993c8d7b629557b97a9f57 499 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 288 302 1.5E-6 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Theam_1542 e5386bdf80993c8d7b629557b97a9f57 499 SUPERFAMILY SSF54211 9 169 6.07E-36 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_1542 e5386bdf80993c8d7b629557b97a9f57 499 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 142 1.5E-44 T 13-10-2018 Theam_1542 e5386bdf80993c8d7b629557b97a9f57 499 Gene3D G3DSA:3.30.230.10 4 169 3.2E-16 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Theam_1542 e5386bdf80993c8d7b629557b97a9f57 499 SMART SM00382 210 347 0.0016 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1542 e5386bdf80993c8d7b629557b97a9f57 499 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 498 4.6E-190 T 13-10-2018 IPR004482 Mg chelatase-related protein Theam_1542 e5386bdf80993c8d7b629557b97a9f57 499 SUPERFAMILY SSF52540 189 497 2.79E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1542 e5386bdf80993c8d7b629557b97a9f57 499 Gene3D G3DSA:3.40.50.300 191 499 4.2E-62 T 13-10-2018 Theam_1542 e5386bdf80993c8d7b629557b97a9f57 499 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 396 3.2E-91 T 13-10-2018 IPR000523 Magnesium chelatase ChlI domain Theam_1431 c5bd656c8c8e7600a7f540dd9e649667 73 Gene3D G3DSA:2.30.30.90 11 71 3.2E-19 T 13-10-2018 IPR038157 Ferrous iron transporter, core domain Theam_1431 c5bd656c8c8e7600a7f540dd9e649667 73 SMART SM00899 1 71 6.5E-17 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Theam_1431 c5bd656c8c8e7600a7f540dd9e649667 73 SUPERFAMILY SSF50037 3 72 4.12E-14 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal Theam_1431 c5bd656c8c8e7600a7f540dd9e649667 73 Pfam PF04023 FeoA domain 1 70 7.6E-18 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Theam_1446 94792c43f3576e3401916126bc1e07f5 522 Pfam PF00460 Flagella basal body rod protein 5 35 2.0E-8 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Theam_1446 94792c43f3576e3401916126bc1e07f5 522 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 503 8.1E-82 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Theam_1446 94792c43f3576e3401916126bc1e07f5 522 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 463 519 2.0E-18 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Theam_1446 94792c43f3576e3401916126bc1e07f5 522 Pfam PF07559 Flagellar basal body protein FlaE 183 403 2.0E-19 T 13-10-2018 IPR011491 Flagellar hook protein FlgE Theam_1446 94792c43f3576e3401916126bc1e07f5 522 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Theam_1446 94792c43f3576e3401916126bc1e07f5 522 Gene3D G3DSA:2.60.98.20 156 282 1.7E-23 T 13-10-2018 IPR037058 Flagellar hook protein FlgE superfamily Theam_1446 94792c43f3576e3401916126bc1e07f5 522 SUPERFAMILY SSF117143 312 482 7.85E-19 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Theam_1446 94792c43f3576e3401916126bc1e07f5 522 SUPERFAMILY SSF117143 86 326 2.22E-43 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Theam_1002 a5557242bf8a9b2e7a6398694a6acbc5 264 Gene3D G3DSA:2.160.20.60 12 251 9.2E-40 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Theam_1002 a5557242bf8a9b2e7a6398694a6acbc5 264 SUPERFAMILY SSF69336 12 252 7.06E-55 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Theam_1002 a5557242bf8a9b2e7a6398694a6acbc5 264 Pfam PF01493 GXGXG motif 19 197 1.6E-41 T 13-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Theam_1002 a5557242bf8a9b2e7a6398694a6acbc5 264 PIRSF PIRSF006519 7 254 2.5E-81 T 13-10-2018 IPR012061 Glutamate synthase, large subunit domain 3 stand-alone protein Theam_0020 edf4e30967e413337e1aad8a2b1fcf8b 440 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 38 430 2.1E-9 T 13-10-2018 IPR021145 Portal protein Theam_1501 3ce22d0ef810e98b6d2138211752ee21 308 Gene3D G3DSA:1.10.3720.10 66 306 4.4E-33 T 13-10-2018 IPR035906 MetI-like superfamily Theam_1501 3ce22d0ef810e98b6d2138211752ee21 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 300 1.6E-12 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Theam_1501 3ce22d0ef810e98b6d2138211752ee21 308 SUPERFAMILY SSF161098 21 296 5.23E-34 T 13-10-2018 IPR035906 MetI-like superfamily Theam_1501 3ce22d0ef810e98b6d2138211752ee21 308 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 12 301 2.7E-92 T 13-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Theam_0182 310dae01c1f081ee01a40f15909fae58 290 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 37 54 - T 13-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Theam_0182 310dae01c1f081ee01a40f15909fae58 290 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 162 - T 13-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Theam_0182 310dae01c1f081ee01a40f15909fae58 290 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 1.2E-98 T 13-10-2018 IPR002220 DapA-like GO:0016829 Theam_0182 310dae01c1f081ee01a40f15909fae58 290 PIRSF PIRSF001365 1 289 1.9E-100 T 13-10-2018 IPR002220 DapA-like GO:0016829 Theam_0182 310dae01c1f081ee01a40f15909fae58 290 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 286 67.165 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Theam_0182 310dae01c1f081ee01a40f15909fae58 290 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 286 3.4E-114 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Theam_0182 310dae01c1f081ee01a40f15909fae58 290 SUPERFAMILY SSF51569 2 288 4.61E-107 T 13-10-2018 Theam_0182 310dae01c1f081ee01a40f15909fae58 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 2.8E-39 T 13-10-2018 IPR002220 DapA-like GO:0016829 Theam_0182 310dae01c1f081ee01a40f15909fae58 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 2.8E-39 T 13-10-2018 IPR002220 DapA-like GO:0016829 Theam_0182 310dae01c1f081ee01a40f15909fae58 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 2.8E-39 T 13-10-2018 IPR002220 DapA-like GO:0016829 Theam_0182 310dae01c1f081ee01a40f15909fae58 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 2.8E-39 T 13-10-2018 IPR002220 DapA-like GO:0016829 Theam_0182 310dae01c1f081ee01a40f15909fae58 290 Gene3D G3DSA:3.20.20.70 1 290 6.4E-118 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0182 310dae01c1f081ee01a40f15909fae58 290 SMART SM01130 1 288 4.3E-149 T 13-10-2018 IPR002220 DapA-like GO:0016829 Theam_1259 33830653a000fefac835b60439a45ecd 190 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 179 2.7E-30 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Theam_1259 33830653a000fefac835b60439a45ecd 190 Gene3D G3DSA:3.40.50.300 1 189 5.8E-53 T 13-10-2018 Theam_1259 33830653a000fefac835b60439a45ecd 190 Pfam PF01121 Dephospho-CoA kinase 2 170 2.5E-31 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Theam_1259 33830653a000fefac835b60439a45ecd 190 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 190 18.73 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Theam_1259 33830653a000fefac835b60439a45ecd 190 SUPERFAMILY SSF52540 2 186 9.35E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0071 99ca2af230420b5c77fd7f396b39e83b 222 SMART SM00947 33 187 1.3E-19 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Theam_0071 99ca2af230420b5c77fd7f396b39e83b 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 45 52 - T 13-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Theam_0071 99ca2af230420b5c77fd7f396b39e83b 222 SUPERFAMILY SSF53056 5 192 1.7E-33 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Theam_0071 99ca2af230420b5c77fd7f396b39e83b 222 Pfam PF00484 Carbonic anhydrase 41 179 5.2E-24 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Theam_0071 99ca2af230420b5c77fd7f396b39e83b 222 Gene3D G3DSA:3.40.1050.10 1 191 2.4E-33 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Theam_1432 4dba6042f946934276d2f4060c50a09d 671 SUPERFAMILY SSF52540 5 173 7.96E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1432 4dba6042f946934276d2f4060c50a09d 671 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 3.0E-5 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_1432 4dba6042f946934276d2f4060c50a09d 671 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 3.0E-5 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_1432 4dba6042f946934276d2f4060c50a09d 671 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 157 1.2E-13 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Theam_1432 4dba6042f946934276d2f4060c50a09d 671 Pfam PF07664 Ferrous iron transport protein B C terminus 463 511 3.0E-13 T 13-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 Theam_1432 4dba6042f946934276d2f4060c50a09d 671 Pfam PF07670 Nucleoside recognition 360 451 3.9E-7 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Theam_1432 4dba6042f946934276d2f4060c50a09d 671 Pfam PF07670 Nucleoside recognition 520 642 3.1E-33 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Theam_1432 4dba6042f946934276d2f4060c50a09d 671 Pfam PF02421 Ferrous iron transport protein B 5 157 1.5E-58 T 13-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 Theam_1432 4dba6042f946934276d2f4060c50a09d 671 Gene3D G3DSA:3.40.50.300 3 179 5.8E-42 T 13-10-2018 Theam_1432 4dba6042f946934276d2f4060c50a09d 671 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 638 9.8E-179 T 13-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 Theam_0538 7ad2cc8fab78710902008a148402f8c5 255 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 10 93 1.9E-35 T 13-10-2018 IPR010627 Peptidase A24A, N-terminal Theam_0538 7ad2cc8fab78710902008a148402f8c5 255 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 191 206 1.8E-12 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Theam_0538 7ad2cc8fab78710902008a148402f8c5 255 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 179 190 1.8E-12 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Theam_0538 7ad2cc8fab78710902008a148402f8c5 255 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 168 178 1.8E-12 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Theam_0538 7ad2cc8fab78710902008a148402f8c5 255 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 112 129 1.8E-12 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Theam_0538 7ad2cc8fab78710902008a148402f8c5 255 Gene3D G3DSA:1.20.120.1220 94 251 1.7E-7 T 13-10-2018 Theam_0538 7ad2cc8fab78710902008a148402f8c5 255 Pfam PF01478 Type IV leader peptidase family 103 211 9.8E-21 T 13-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Theam_0819 56d45b19167bd53fae95539e541e97f6 294 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 78 276 1.3E-59 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Theam_0819 56d45b19167bd53fae95539e541e97f6 294 Gene3D G3DSA:1.20.1640.10 83 293 1.3E-11 T 13-10-2018 Theam_0819 56d45b19167bd53fae95539e541e97f6 294 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 5 290 29.239 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Theam_0819 56d45b19167bd53fae95539e541e97f6 294 Pfam PF07549 SecD/SecF GG Motif 31 54 3.0E-7 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Theam_0819 56d45b19167bd53fae95539e541e97f6 294 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 36 279 3.8E-80 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Theam_0819 56d45b19167bd53fae95539e541e97f6 294 PRINTS PR01755 Bacterial translocase SecF protein signature 194 212 3.9E-30 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Theam_0819 56d45b19167bd53fae95539e541e97f6 294 PRINTS PR01755 Bacterial translocase SecF protein signature 33 48 3.9E-30 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Theam_0819 56d45b19167bd53fae95539e541e97f6 294 PRINTS PR01755 Bacterial translocase SecF protein signature 227 242 3.9E-30 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Theam_0819 56d45b19167bd53fae95539e541e97f6 294 PRINTS PR01755 Bacterial translocase SecF protein signature 146 160 3.9E-30 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Theam_0819 56d45b19167bd53fae95539e541e97f6 294 Pfam PF02355 Protein export membrane protein 105 288 5.2E-69 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Theam_0819 56d45b19167bd53fae95539e541e97f6 294 SUPERFAMILY SSF82866 74 291 4.97E-42 T 13-10-2018 Theam_1552 d77016d8c09829f29f45eea762cf2f7b 352 Gene3D G3DSA:1.10.620.20 15 342 7.5E-88 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Theam_1552 d77016d8c09829f29f45eea762cf2f7b 352 Pfam PF00268 Ribonucleotide reductase, small chain 37 312 2.4E-76 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_1552 d77016d8c09829f29f45eea762cf2f7b 352 SUPERFAMILY SSF47240 23 351 3.47E-86 T 13-10-2018 IPR009078 Ferritin-like superfamily Theam_1552 d77016d8c09829f29f45eea762cf2f7b 352 PIRSF PIRSF000355 5 352 2.0E-117 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_0842 9e124fd8e20e72fbfe26e771c629494a 237 Gene3D G3DSA:3.20.10.10 85 229 7.1E-36 T 13-10-2018 Theam_0842 9e124fd8e20e72fbfe26e771c629494a 237 Gene3D G3DSA:3.30.470.10 4 84 4.2E-9 T 13-10-2018 Theam_0842 9e124fd8e20e72fbfe26e771c629494a 237 Pfam PF01063 Amino-transferase class IV 5 206 3.7E-39 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Theam_0842 9e124fd8e20e72fbfe26e771c629494a 237 SUPERFAMILY SSF56752 4 230 6.28E-50 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Theam_0148 6bfefd6e3dc61db93df9529a862ad5ab 311 Pfam PF02779 Transketolase, pyrimidine binding domain 3 167 2.2E-39 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Theam_0148 6bfefd6e3dc61db93df9529a862ad5ab 311 Gene3D G3DSA:3.40.50.920 180 311 1.2E-46 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Theam_0148 6bfefd6e3dc61db93df9529a862ad5ab 311 Gene3D G3DSA:3.40.50.970 1 174 1.2E-64 T 13-10-2018 Theam_0148 6bfefd6e3dc61db93df9529a862ad5ab 311 SUPERFAMILY SSF52518 2 170 4.93E-59 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Theam_0148 6bfefd6e3dc61db93df9529a862ad5ab 311 SMART SM00861 4 170 7.4E-59 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Theam_0148 6bfefd6e3dc61db93df9529a862ad5ab 311 SUPERFAMILY SSF52922 175 308 2.22E-42 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Theam_0148 6bfefd6e3dc61db93df9529a862ad5ab 311 Pfam PF02780 Transketolase, C-terminal domain 180 300 1.7E-37 T 13-10-2018 IPR033248 Transketolase, C-terminal domain Theam_0148 6bfefd6e3dc61db93df9529a862ad5ab 311 ProSitePatterns PS00802 Transketolase signature 2. 112 128 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Theam_0626 ce09c324c9b33f271c33e415455b45df 407 SUPERFAMILY SSF111352 12 381 1.31E-94 T 13-10-2018 Theam_0626 ce09c324c9b33f271c33e415455b45df 407 Pfam PF00909 Ammonium Transporter Family 17 400 1.0E-93 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Theam_0626 ce09c324c9b33f271c33e415455b45df 407 Gene3D G3DSA:1.10.3430.10 2 406 5.6E-106 T 13-10-2018 IPR029020 Ammonium/urea transporter Theam_0626 ce09c324c9b33f271c33e415455b45df 407 ProSitePatterns PS01219 Ammonium transporters signature. 164 189 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Theam_1561 6617c3f3a48b5ddf72e188ba3a412ed2 720 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 392 714 3.8E-145 T 13-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Theam_1561 6617c3f3a48b5ddf72e188ba3a412ed2 720 Gene3D G3DSA:3.20.20.210 352 717 9.1E-276 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Theam_1561 6617c3f3a48b5ddf72e188ba3a412ed2 720 Gene3D G3DSA:3.20.20.210 8 485 9.1E-276 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Theam_1561 6617c3f3a48b5ddf72e188ba3a412ed2 720 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 289 2.6E-74 T 13-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Theam_1561 6617c3f3a48b5ddf72e188ba3a412ed2 720 SUPERFAMILY SSF51726 4 338 1.15E-57 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Theam_1561 6617c3f3a48b5ddf72e188ba3a412ed2 720 SUPERFAMILY SSF51726 357 719 8.63E-118 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Theam_1561 6617c3f3a48b5ddf72e188ba3a412ed2 720 PIRSF PIRSF000382 1 720 8.1E-270 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Theam_0544 f15cea037a2469eb572cea55be3dd2b0 676 Gene3D G3DSA:3.40.50.1820 380 602 1.3E-8 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Theam_0544 f15cea037a2469eb572cea55be3dd2b0 676 SUPERFAMILY SSF53474 385 600 4.97E-6 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 SUPERFAMILY SSF50677 225 418 1.26E-57 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 Pfam PF08264 Anticodon-binding domain of tRNA 758 878 6.2E-20 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 407 1.5E-76 T 13-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 50 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 420 537 4.4E-8 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 674 714 1.1E-6 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 3 916 0.0 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 916 23.467 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 SUPERFAMILY SSF47323 718 916 1.55E-35 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 Pfam PF09334 tRNA synthetases class I (M) 38 178 3.5E-22 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 PRINTS PR00985 Leucyl-tRNA synthetase signature 575 585 1.1E-50 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 PRINTS PR00985 Leucyl-tRNA synthetase signature 150 166 1.1E-50 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 1.1E-50 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 PRINTS PR00985 Leucyl-tRNA synthetase signature 530 552 1.1E-50 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 PRINTS PR00985 Leucyl-tRNA synthetase signature 183 196 1.1E-50 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 PRINTS PR00985 Leucyl-tRNA synthetase signature 491 509 1.1E-50 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 PRINTS PR00985 Leucyl-tRNA synthetase signature 124 141 1.1E-50 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 SUPERFAMILY SSF52374 1 724 9.47E-148 T 13-10-2018 Theam_1356 3e5ea3d5508d874928537a1eb1136cfc 917 Gene3D G3DSA:3.10.20.590 855 917 3.9E-20 T 13-10-2018 Theam_1186 01ee978b67845c190e95b21c470232ed 592 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 492 2.2E-76 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain Theam_1186 01ee978b67845c190e95b21c470232ed 592 SUPERFAMILY SSF53850 56 585 3.46E-119 T 13-10-2018 Theam_1186 01ee978b67845c190e95b21c470232ed 592 PIRSF PIRSF002741 40 585 1.1E-93 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Theam_1186 01ee978b67845c190e95b21c470232ed 592 Gene3D G3DSA:3.10.105.10 319 555 2.1E-120 T 13-10-2018 Theam_1186 01ee978b67845c190e95b21c470232ed 592 Gene3D G3DSA:3.40.190.10 68 569 2.1E-120 T 13-10-2018 Theam_1186 01ee978b67845c190e95b21c470232ed 592 Gene3D G3DSA:3.90.76.10 90 213 2.1E-120 T 13-10-2018 Theam_1301 816eccf645c2bca8723068cdf87fe6da 221 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Theam_1301 816eccf645c2bca8723068cdf87fe6da 221 Hamap MF_00494 Probable transaldolase [tal]. 1 214 48.495 T 13-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Theam_1301 816eccf645c2bca8723068cdf87fe6da 221 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 4.3E-106 T 13-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Theam_1301 816eccf645c2bca8723068cdf87fe6da 221 SUPERFAMILY SSF51569 1 212 1.36E-84 T 13-10-2018 Theam_1301 816eccf645c2bca8723068cdf87fe6da 221 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 199 4.3E-64 T 13-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Theam_1301 816eccf645c2bca8723068cdf87fe6da 221 Gene3D G3DSA:3.20.20.70 1 217 4.5E-97 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1301 816eccf645c2bca8723068cdf87fe6da 221 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Theam_0054 fbbd2768cacc078031065438e121d9b9 93 Gene3D G3DSA:3.40.1350.10 1 66 8.4E-7 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Theam_0054 fbbd2768cacc078031065438e121d9b9 93 Pfam PF01870 Archaeal holliday junction resolvase (hjc) 9 39 1.0E-5 T 13-10-2018 IPR002732 Holliday junction resolvase Hjc Theam_0054 fbbd2768cacc078031065438e121d9b9 93 SUPERFAMILY SSF52980 4 76 9.92E-7 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Theam_0835 08661e24b9e84aae4b2a92ffe3ec05b7 291 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 8 285 1.0E-98 T 13-10-2018 IPR006371 4-hydroxybenzoate polyprenyltransferase-related Theam_0835 08661e24b9e84aae4b2a92ffe3ec05b7 291 Pfam PF01040 UbiA prenyltransferase family 23 267 1.1E-53 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Theam_0835 08661e24b9e84aae4b2a92ffe3ec05b7 291 Gene3D G3DSA:1.10.357.140 14 166 4.7E-54 T 13-10-2018 Theam_0835 08661e24b9e84aae4b2a92ffe3ec05b7 291 Gene3D G3DSA:1.20.120.1780 167 290 4.3E-39 T 13-10-2018 Theam_0735 c487a5427216e41cc5034456ab533d9a 160 PIRSF PIRSF000216 1 159 9.8E-50 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0735 c487a5427216e41cc5034456ab533d9a 160 Gene3D G3DSA:1.10.10.1590 3 73 8.7E-11 T 13-10-2018 Theam_0735 c487a5427216e41cc5034456ab533d9a 160 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 113 131 - T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0735 c487a5427216e41cc5034456ab533d9a 160 Gene3D G3DSA:3.40.30.10 74 159 4.5E-28 T 13-10-2018 Theam_0735 c487a5427216e41cc5034456ab533d9a 160 SUPERFAMILY SSF52833 5 155 8.95E-46 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Theam_0735 c487a5427216e41cc5034456ab533d9a 160 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 17 155 1.4E-46 T 13-10-2018 Theam_0708 1b99ef0ab9e2c39bef6dc53d69b26b90 311 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 308 1.0E-11 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Theam_0708 1b99ef0ab9e2c39bef6dc53d69b26b90 311 SUPERFAMILY SSF52540 4 252 3.71E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0708 1b99ef0ab9e2c39bef6dc53d69b26b90 311 Gene3D G3DSA:3.40.50.300 2 311 1.0E-85 T 13-10-2018 Theam_0708 1b99ef0ab9e2c39bef6dc53d69b26b90 311 Pfam PF00005 ABC transporter 30 182 1.5E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_0708 1b99ef0ab9e2c39bef6dc53d69b26b90 311 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 289 4.7E-11 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Theam_0708 1b99ef0ab9e2c39bef6dc53d69b26b90 311 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Theam_0708 1b99ef0ab9e2c39bef6dc53d69b26b90 311 SMART SM00382 39 231 5.5E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1420 ebbec0ee7fa267c06e6d1075962daa89 156 Pfam PF00582 Universal stress protein family 4 152 8.7E-29 T 13-10-2018 IPR006016 UspA Theam_1420 ebbec0ee7fa267c06e6d1075962daa89 156 Gene3D G3DSA:3.40.50.620 1 156 1.5E-38 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1420 ebbec0ee7fa267c06e6d1075962daa89 156 SUPERFAMILY SSF52402 4 153 1.0E-32 T 13-10-2018 Theam_1420 ebbec0ee7fa267c06e6d1075962daa89 156 PRINTS PR01438 Universal stress protein signature 112 124 2.7E-19 T 13-10-2018 IPR006015 Universal stress protein A Theam_1420 ebbec0ee7fa267c06e6d1075962daa89 156 PRINTS PR01438 Universal stress protein signature 4 22 2.7E-19 T 13-10-2018 IPR006015 Universal stress protein A Theam_1420 ebbec0ee7fa267c06e6d1075962daa89 156 PRINTS PR01438 Universal stress protein signature 130 152 2.7E-19 T 13-10-2018 IPR006015 Universal stress protein A Theam_0729 b601cf06d56b76a07509e7449a8a3021 266 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 127 250 1.7E-17 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Theam_0729 b601cf06d56b76a07509e7449a8a3021 266 Gene3D G3DSA:1.10.530.10 123 254 1.1E-19 T 13-10-2018 Theam_0729 b601cf06d56b76a07509e7449a8a3021 266 SMART SM00047 105 231 5.9E-4 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Theam_1698 6d517f0ae4d77a74f29337d459dbd881 80 Gene3D G3DSA:3.30.160.60 26 72 2.3E-5 T 13-10-2018 Theam_1660 4e58798e4f191eb63dfdbc144f7ce3d5 286 Pfam PF00231 ATP synthase 4 285 4.2E-86 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1660 4e58798e4f191eb63dfdbc144f7ce3d5 286 Gene3D G3DSA:3.40.1380.10 61 205 6.3E-87 T 13-10-2018 Theam_1660 4e58798e4f191eb63dfdbc144f7ce3d5 286 SUPERFAMILY SSF52943 3 285 3.01E-76 T 13-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1660 4e58798e4f191eb63dfdbc144f7ce3d5 286 PRINTS PR00126 ATP synthase gamma subunit signature 232 251 2.2E-35 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1660 4e58798e4f191eb63dfdbc144f7ce3d5 286 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 2.2E-35 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1660 4e58798e4f191eb63dfdbc144f7ce3d5 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 2.2E-35 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1660 4e58798e4f191eb63dfdbc144f7ce3d5 286 PRINTS PR00126 ATP synthase gamma subunit signature 263 284 2.2E-35 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1660 4e58798e4f191eb63dfdbc144f7ce3d5 286 Gene3D G3DSA:1.10.287.80 6 279 6.3E-87 T 13-10-2018 Theam_1660 4e58798e4f191eb63dfdbc144f7ce3d5 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 285 29.784 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1660 4e58798e4f191eb63dfdbc144f7ce3d5 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 284 2.2E-88 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_0511 e09169facea9aee7d0f0bac76f664428 568 Gene3D G3DSA:3.30.300.160 55 136 1.6E-8 T 13-10-2018 Theam_0511 e09169facea9aee7d0f0bac76f664428 568 Pfam PF00437 Type II/IV secretion system protein 192 457 8.6E-88 T 13-10-2018 IPR001482 Type II/IV secretion system protein Theam_0511 e09169facea9aee7d0f0bac76f664428 568 SUPERFAMILY SSF52540 174 565 4.42E-110 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0511 e09169facea9aee7d0f0bac76f664428 568 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 34 140 1.5E-20 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal Theam_0511 e09169facea9aee7d0f0bac76f664428 568 SUPERFAMILY SSF160246 22 136 7.06E-26 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Theam_0511 e09169facea9aee7d0f0bac76f664428 568 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 27 566 5.8E-215 T 13-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 Theam_0511 e09169facea9aee7d0f0bac76f664428 568 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 385 399 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Theam_0511 e09169facea9aee7d0f0bac76f664428 568 Gene3D G3DSA:3.30.450.90 152 290 2.8E-52 T 13-10-2018 Theam_0511 e09169facea9aee7d0f0bac76f664428 568 Gene3D G3DSA:3.40.50.300 295 567 2.5E-119 T 13-10-2018 Theam_0518 c9be88dbcd7b980b93c7d33f96b42314 281 Pfam PF10134 Replication initiator protein A 41 169 1.2E-6 T 13-10-2018 IPR018777 Replication initiator protein A Theam_1157 9b8ec7f599a77582b7c36888aae68f40 205 Pfam PF13500 AAA domain 2 188 1.1E-36 T 13-10-2018 Theam_1157 9b8ec7f599a77582b7c36888aae68f40 205 SUPERFAMILY SSF52540 1 189 1.69E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1157 9b8ec7f599a77582b7c36888aae68f40 205 Gene3D G3DSA:3.40.50.300 1 196 1.9E-54 T 13-10-2018 Theam_1157 9b8ec7f599a77582b7c36888aae68f40 205 PIRSF PIRSF006755 1 194 6.7E-49 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Theam_1157 9b8ec7f599a77582b7c36888aae68f40 205 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 199 23.814 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Theam_1157 9b8ec7f599a77582b7c36888aae68f40 205 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 3 164 4.6E-45 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Theam_1830 af8a8f8f86f928a162956f71c63334a0 189 Gene3D G3DSA:3.30.390.80 3 137 7.9E-8 T 13-10-2018 Theam_1830 af8a8f8f86f928a162956f71c63334a0 189 Pfam PF04098 Rad52/22 family double-strand break repair protein 37 133 7.4E-9 T 13-10-2018 IPR007232 DNA repair protein Rad52/59/22 GO:0006281|GO:0006310 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938 Theam_1830 af8a8f8f86f928a162956f71c63334a0 189 SUPERFAMILY SSF54768 41 124 3.45E-5 T 13-10-2018 Theam_0066 eebff2df9fee5cafa36472deb62c60d7 394 SUPERFAMILY SSF111369 58 253 2.09E-14 T 13-10-2018 Theam_0066 eebff2df9fee5cafa36472deb62c60d7 394 Gene3D G3DSA:2.40.50.100 70 239 3.2E-46 T 13-10-2018 Theam_0066 eebff2df9fee5cafa36472deb62c60d7 394 Gene3D G3DSA:2.40.30.170 58 312 3.2E-46 T 13-10-2018 Theam_0066 eebff2df9fee5cafa36472deb62c60d7 394 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 48 371 4.9E-30 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Theam_0066 eebff2df9fee5cafa36472deb62c60d7 394 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 305 2.3E-10 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Theam_0066 eebff2df9fee5cafa36472deb62c60d7 394 Gene3D G3DSA:2.40.420.20 48 369 3.2E-46 T 13-10-2018 Theam_0066 eebff2df9fee5cafa36472deb62c60d7 394 Gene3D G3DSA:1.10.287.470 104 195 3.2E-46 T 13-10-2018 Theam_0942 96ae19eeea05d230d5379068a17affc0 426 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 328 417 1.1E-33 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Theam_0942 96ae19eeea05d230d5379068a17affc0 426 Gene3D G3DSA:3.30.1490.20 120 188 3.3E-29 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Theam_0942 96ae19eeea05d230d5379068a17affc0 426 SUPERFAMILY SSF51246 325 420 3.51E-34 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Theam_0942 96ae19eeea05d230d5379068a17affc0 426 Gene3D G3DSA:3.30.470.20 189 325 3.0E-57 T 13-10-2018 Theam_0942 96ae19eeea05d230d5379068a17affc0 426 Gene3D G3DSA:3.40.50.20 2 93 4.8E-39 T 13-10-2018 Theam_0942 96ae19eeea05d230d5379068a17affc0 426 SUPERFAMILY SSF56059 102 319 1.57E-63 T 13-10-2018 Theam_0942 96ae19eeea05d230d5379068a17affc0 426 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 2.8E-181 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Theam_0942 96ae19eeea05d230d5379068a17affc0 426 SMART SM01209 101 293 1.3E-133 T 13-10-2018 Theam_0942 96ae19eeea05d230d5379068a17affc0 426 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 2.7E-83 T 13-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Theam_0942 96ae19eeea05d230d5379068a17affc0 426 SUPERFAMILY SSF52440 1 101 3.88E-37 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Theam_0942 96ae19eeea05d230d5379068a17affc0 426 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 9.0E-38 T 13-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Theam_0942 96ae19eeea05d230d5379068a17affc0 426 Gene3D G3DSA:3.90.600.10 326 426 8.7E-42 T 13-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Theam_0942 96ae19eeea05d230d5379068a17affc0 426 SMART SM01210 326 420 6.1E-60 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Theam_0942 96ae19eeea05d230d5379068a17affc0 426 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 44.946 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Theam_0942 96ae19eeea05d230d5379068a17affc0 426 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 13-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Theam_1518 b0ef22f01bd6d9a90a8e7f86ea4d093a 158 PRINTS PR01438 Universal stress protein signature 133 155 4.5E-12 T 13-10-2018 IPR006015 Universal stress protein A Theam_1518 b0ef22f01bd6d9a90a8e7f86ea4d093a 158 PRINTS PR01438 Universal stress protein signature 4 22 4.5E-12 T 13-10-2018 IPR006015 Universal stress protein A Theam_1518 b0ef22f01bd6d9a90a8e7f86ea4d093a 158 SUPERFAMILY SSF52402 4 156 1.26E-33 T 13-10-2018 Theam_1518 b0ef22f01bd6d9a90a8e7f86ea4d093a 158 Gene3D G3DSA:3.40.50.620 1 158 2.0E-41 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1518 b0ef22f01bd6d9a90a8e7f86ea4d093a 158 Pfam PF00582 Universal stress protein family 4 155 2.6E-28 T 13-10-2018 IPR006016 UspA Theam_0525 3562070239b1d5f7380f0a4e2919db43 756 SUPERFAMILY SSF52540 293 508 1.46E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0525 3562070239b1d5f7380f0a4e2919db43 756 Gene3D G3DSA:3.40.50.300 287 597 5.4E-78 T 13-10-2018 Theam_0525 3562070239b1d5f7380f0a4e2919db43 756 SMART SM00534 319 504 6.6E-72 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Theam_0525 3562070239b1d5f7380f0a4e2919db43 756 SUPERFAMILY SSF48334 25 283 6.67E-20 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Theam_0525 3562070239b1d5f7380f0a4e2919db43 756 Gene3D G3DSA:3.30.1370.110 671 756 2.9E-25 T 13-10-2018 Theam_0525 3562070239b1d5f7380f0a4e2919db43 756 Pfam PF00488 MutS domain V 322 501 2.7E-37 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Theam_0525 3562070239b1d5f7380f0a4e2919db43 756 Pfam PF01713 Smr domain 683 755 4.7E-20 T 13-10-2018 IPR002625 Smr domain Theam_0525 3562070239b1d5f7380f0a4e2919db43 756 PIRSF PIRSF005814 1 756 3.0E-214 T 13-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Theam_0525 3562070239b1d5f7380f0a4e2919db43 756 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 1 755 19.596 T 13-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Theam_0525 3562070239b1d5f7380f0a4e2919db43 756 SUPERFAMILY SSF160443 681 755 1.83E-8 T 13-10-2018 IPR036063 Smr domain superfamily Theam_0525 3562070239b1d5f7380f0a4e2919db43 756 SMART SM00463 678 756 4.5E-13 T 13-10-2018 IPR002625 Smr domain Theam_0525 3562070239b1d5f7380f0a4e2919db43 756 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 401 417 - T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Theam_0525 3562070239b1d5f7380f0a4e2919db43 756 SMART SM00533 7 307 2.8E-11 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Theam_0525 3562070239b1d5f7380f0a4e2919db43 756 TIGRFAM TIGR01069 mutS2: MutS2 family protein 3 755 4.4E-210 T 13-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Theam_0109 af053861d88c163508e0c27c34099351 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 114 3.6E-24 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Theam_0109 af053861d88c163508e0c27c34099351 124 TIGRFAM TIGR00494 crcB: protein CrcB 4 117 8.3E-32 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Theam_0109 af053861d88c163508e0c27c34099351 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 119 19.807 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Theam_0446 1bd7f9ab6b788fbf900bbb87b17af266 316 Pfam PF01458 Uncharacterized protein family (UPF0051) 94 314 2.5E-35 T 13-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 Theam_0446 1bd7f9ab6b788fbf900bbb87b17af266 316 SUPERFAMILY SSF101960 62 315 8.63E-39 T 13-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Theam_1412 c30e59ec367616f4f574e3824ff0ada0 285 SUPERFAMILY SSF52518 25 271 4.84E-80 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Theam_1412 c30e59ec367616f4f574e3824ff0ada0 285 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 63 210 1.5E-34 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Theam_1412 c30e59ec367616f4f574e3824ff0ada0 285 Gene3D G3DSA:3.40.50.970 90 257 5.6E-34 T 13-10-2018 Theam_1600 6cd4001721c789913ededc4589bce962 433 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 428 9.0E-202 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Theam_1600 6cd4001721c789913ededc4589bce962 433 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 429 105.649 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Theam_1600 6cd4001721c789913ededc4589bce962 433 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Theam_1600 6cd4001721c789913ededc4589bce962 433 Gene3D G3DSA:3.90.1150.10 10 421 8.4E-191 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Theam_1600 6cd4001721c789913ededc4589bce962 433 Pfam PF00202 Aminotransferase class-III 33 402 2.0E-83 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Theam_1600 6cd4001721c789913ededc4589bce962 433 SUPERFAMILY SSF53383 2 428 7.08E-141 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Theam_1600 6cd4001721c789913ededc4589bce962 433 Gene3D G3DSA:3.40.640.10 71 319 8.4E-191 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Theam_1471 767d83552aeab7291afd2b3b9c67a84a 532 PIRSF PIRSF003128 1 521 1.4E-119 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Theam_1471 767d83552aeab7291afd2b3b9c67a84a 532 Pfam PF02463 RecF/RecN/SMC N terminal domain 62 477 7.8E-13 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Theam_1471 767d83552aeab7291afd2b3b9c67a84a 532 Gene3D G3DSA:3.40.50.300 241 517 6.7E-48 T 13-10-2018 Theam_1471 767d83552aeab7291afd2b3b9c67a84a 532 Gene3D G3DSA:3.40.50.300 1 240 2.8E-34 T 13-10-2018 Theam_1471 767d83552aeab7291afd2b3b9c67a84a 532 SUPERFAMILY SSF52540 1 483 1.13E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0166 46fef99eaa9c6707376e996650041be1 556 SMART SM00267 387 556 3.8E-63 T 13-10-2018 IPR000160 GGDEF domain Theam_0166 46fef99eaa9c6707376e996650041be1 556 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 394 554 2.3E-53 T 13-10-2018 IPR000160 GGDEF domain Theam_0166 46fef99eaa9c6707376e996650041be1 556 SUPERFAMILY SSF55073 403 555 5.73E-49 T 13-10-2018 IPR029787 Nucleotide cyclase Theam_0166 46fef99eaa9c6707376e996650041be1 556 Pfam PF00990 Diguanylate cyclase, GGDEF domain 398 552 1.6E-47 T 13-10-2018 IPR000160 GGDEF domain Theam_0166 46fef99eaa9c6707376e996650041be1 556 SUPERFAMILY SSF56281 6 227 1.76E-28 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_0166 46fef99eaa9c6707376e996650041be1 556 SMART SM00849 27 217 3.3E-12 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_0166 46fef99eaa9c6707376e996650041be1 556 Gene3D G3DSA:3.30.70.270 386 555 3.8E-58 T 13-10-2018 Theam_0166 46fef99eaa9c6707376e996650041be1 556 Pfam PF00753 Metallo-beta-lactamase superfamily 24 217 6.7E-7 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_0166 46fef99eaa9c6707376e996650041be1 556 Gene3D G3DSA:3.60.15.10 5 235 1.0E-54 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_1310 b3db300ec6d48ce5b5747eae6833ffda 268 PIRSF PIRSF035875 5 260 3.9E-29 T 13-10-2018 IPR017039 Virulence factor BrkB Theam_1310 b3db300ec6d48ce5b5747eae6833ffda 268 Pfam PF03631 Virulence factor BrkB 26 255 3.4E-32 T 13-10-2018 IPR017039 Virulence factor BrkB Theam_0732 d2e3d5012f5f03f8e33ba62bbb462edf 157 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 7 147 5.7E-65 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0732 d2e3d5012f5f03f8e33ba62bbb462edf 157 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 34 140 5.4E-21 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0732 d2e3d5012f5f03f8e33ba62bbb462edf 157 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 2 146 39.72 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0732 d2e3d5012f5f03f8e33ba62bbb462edf 157 Gene3D G3DSA:3.40.50.12280 2 154 1.6E-68 T 13-10-2018 Theam_0732 d2e3d5012f5f03f8e33ba62bbb462edf 157 SUPERFAMILY SSF56770 5 149 1.15E-61 T 13-10-2018 Theam_1289 5f766c96e503fbc14098801c92914b59 322 Pfam PF00535 Glycosyl transferase family 2 8 142 8.7E-37 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Theam_1289 5f766c96e503fbc14098801c92914b59 322 Gene3D G3DSA:3.90.550.10 2 234 9.1E-51 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_1289 5f766c96e503fbc14098801c92914b59 322 SUPERFAMILY SSF53448 5 264 6.65E-54 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0978 bd7c0ca8bd4bf0a4ad42840b7f0590bc 650 Gene3D G3DSA:2.70.98.10 386 648 4.9E-50 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Theam_0978 bd7c0ca8bd4bf0a4ad42840b7f0590bc 650 Pfam PF03065 Glycosyl hydrolase family 57 6 263 1.8E-43 T 13-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 Theam_0978 bd7c0ca8bd4bf0a4ad42840b7f0590bc 650 Gene3D G3DSA:3.20.110.20 2 373 1.0E-136 T 13-10-2018 Theam_0978 bd7c0ca8bd4bf0a4ad42840b7f0590bc 650 ProDom PD014405 HYDROLASE METABOLISM CARBOHYDRATE GLYCOSIDASE ALPHA-AMYLASE TRANSFERASE 4-ALPHA-GLUCANOTRANSFERASE GLYCOSYLTRANSFERASE FAMILY DIRECT 311 372 1.0E-13 T 13-10-2018 IPR015178 Alpha-amylase/4-alpha-glucanotransferase, central domain Theam_0978 bd7c0ca8bd4bf0a4ad42840b7f0590bc 650 SUPERFAMILY SSF74650 387 645 1.98E-31 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Theam_0978 bd7c0ca8bd4bf0a4ad42840b7f0590bc 650 SUPERFAMILY SSF88688 303 373 4.12E-24 T 13-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily Theam_0978 bd7c0ca8bd4bf0a4ad42840b7f0590bc 650 SUPERFAMILY SSF88713 1 271 3.11E-54 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Theam_0978 bd7c0ca8bd4bf0a4ad42840b7f0590bc 650 Pfam PF09095 Domain of unknown function (DUF1926) 389 640 5.6E-42 T 13-10-2018 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal GO:0003824|GO:0005975|GO:0030246 Theam_0978 bd7c0ca8bd4bf0a4ad42840b7f0590bc 650 Pfam PF09094 Domain of unknown function (DUF1925) 303 374 1.2E-25 T 13-10-2018 IPR015178 Alpha-amylase/4-alpha-glucanotransferase, central domain Theam_1437 af1f5a72029f7463931adecdbcd543da 341 Pfam PF07238 PilZ domain 218 325 1.2E-13 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Theam_1437 af1f5a72029f7463931adecdbcd543da 341 Gene3D G3DSA:2.40.10.220 219 330 2.1E-11 T 13-10-2018 Theam_1437 af1f5a72029f7463931adecdbcd543da 341 SUPERFAMILY SSF141371 224 332 4.51E-13 T 13-10-2018 Theam_0827 d9eb71b1cec05d73f4c885afefa343a0 608 Gene3D G3DSA:3.40.50.10490 248 607 1.0E-145 T 13-10-2018 Theam_0827 d9eb71b1cec05d73f4c885afefa343a0 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 41.804 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Theam_0827 d9eb71b1cec05d73f4c885afefa343a0 608 SUPERFAMILY SSF53697 246 608 2.78E-113 T 13-10-2018 Theam_0827 d9eb71b1cec05d73f4c885afefa343a0 608 SUPERFAMILY SSF56235 2 234 8.49E-71 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Theam_0827 d9eb71b1cec05d73f4c885afefa343a0 608 Pfam PF13522 Glutamine amidotransferase domain 64 192 3.9E-24 T 13-10-2018 Theam_0827 d9eb71b1cec05d73f4c885afefa343a0 608 Gene3D G3DSA:3.40.50.10490 443 593 1.0E-145 T 13-10-2018 Theam_0827 d9eb71b1cec05d73f4c885afefa343a0 608 Pfam PF01380 SIS domain 290 412 3.8E-33 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Theam_0827 d9eb71b1cec05d73f4c885afefa343a0 608 Pfam PF01380 SIS domain 460 586 5.5E-24 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Theam_0827 d9eb71b1cec05d73f4c885afefa343a0 608 Gene3D G3DSA:3.60.20.10 2 241 5.2E-79 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Theam_0827 d9eb71b1cec05d73f4c885afefa343a0 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 1.4E-255 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Theam_1395 c084f06fe91d169cef7ed634484059f9 188 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 10 183 5.0E-41 T 13-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Theam_1395 c084f06fe91d169cef7ed634484059f9 188 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 1 186 2.2E-66 T 13-10-2018 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 Theam_1395 c084f06fe91d169cef7ed634484059f9 188 SUPERFAMILY SSF53323 1 186 5.1E-49 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Theam_1395 c084f06fe91d169cef7ed634484059f9 188 Gene3D G3DSA:3.40.920.10 1 187 2.9E-70 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Theam_0360 074541de9e8453af5a03eed4704f6fec 480 Gene3D G3DSA:1.10.3090.10 144 469 1.9E-33 T 13-10-2018 Theam_0360 074541de9e8453af5a03eed4704f6fec 480 Gene3D G3DSA:3.30.460.10 1 141 1.6E-31 T 13-10-2018 Theam_0360 074541de9e8453af5a03eed4704f6fec 480 SUPERFAMILY SSF81301 24 142 1.31E-19 T 13-10-2018 Theam_0360 074541de9e8453af5a03eed4704f6fec 480 SUPERFAMILY SSF81891 145 474 5.76E-39 T 13-10-2018 Theam_0360 074541de9e8453af5a03eed4704f6fec 480 TIGRFAM TIGR00277 HDIG: HDIG domain 277 334 1.9E-8 T 13-10-2018 IPR006675 HDIG domain Theam_0360 074541de9e8453af5a03eed4704f6fec 480 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 171 230 3.2E-10 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Theam_0360 074541de9e8453af5a03eed4704f6fec 480 Pfam PF01743 Poly A polymerase head domain 27 146 2.7E-14 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Theam_0360 074541de9e8453af5a03eed4704f6fec 480 SMART SM00471 242 404 0.0012 T 13-10-2018 IPR003607 HD/PDEase domain Theam_0360 074541de9e8453af5a03eed4704f6fec 480 Pfam PF01966 HD domain 248 354 1.7E-12 T 13-10-2018 IPR006674 HD domain Theam_0412 8f4156fc2db30e958f05668b5863bdd4 206 Hamap MF_00165 Thymidylate kinase [tmk]. 1 201 31.54 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Theam_0412 8f4156fc2db30e958f05668b5863bdd4 206 ProSitePatterns PS01331 Thymidylate kinase signature. 90 102 - T 13-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Theam_0412 8f4156fc2db30e958f05668b5863bdd4 206 SUPERFAMILY SSF52540 1 202 7.16E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0412 8f4156fc2db30e958f05668b5863bdd4 206 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 191 2.2E-54 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Theam_0412 8f4156fc2db30e958f05668b5863bdd4 206 Pfam PF02223 Thymidylate kinase 5 192 1.3E-51 T 13-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Theam_0412 8f4156fc2db30e958f05668b5863bdd4 206 Gene3D G3DSA:3.40.50.300 1 203 6.7E-70 T 13-10-2018 Theam_0530 00344a62920db8f5a3658c82643fa572 309 Gene3D G3DSA:3.40.50.720 1 180 6.2E-55 T 13-10-2018 Theam_0530 00344a62920db8f5a3658c82643fa572 309 SUPERFAMILY SSF48179 181 304 1.7E-31 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Theam_0530 00344a62920db8f5a3658c82643fa572 309 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 306 1.9E-83 T 13-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 Theam_0530 00344a62920db8f5a3658c82643fa572 309 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 155 7.0E-40 T 13-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain Theam_0530 00344a62920db8f5a3658c82643fa572 309 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 181 302 4.6E-31 T 13-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain Theam_0530 00344a62920db8f5a3658c82643fa572 309 Gene3D G3DSA:1.10.1040.10 181 309 1.1E-36 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Theam_0530 00344a62920db8f5a3658c82643fa572 309 SUPERFAMILY SSF51735 3 169 2.06E-16 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_1527 bdde4f142cd780e42ed590c5068d4b5d 430 Pfam PF04966 Carbohydrate-selective porin, OprB family 102 430 4.2E-28 T 13-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 Theam_1527 bdde4f142cd780e42ed590c5068d4b5d 430 Gene3D G3DSA:2.40.160.180 69 430 9.2E-39 T 13-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily Theam_0321 1ee6a4f5d79d199701842aafcb02d6cb 111 SUPERFAMILY SSF160537 14 102 2.09E-21 T 13-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 Theam_0321 1ee6a4f5d79d199701842aafcb02d6cb 111 Gene3D G3DSA:3.30.1120.40 12 110 2.8E-24 T 13-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 Theam_0321 1ee6a4f5d79d199701842aafcb02d6cb 111 Pfam PF04026 SpoVG 15 97 4.5E-21 T 13-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 Theam_0076 3b703d48fa10d218b963910230ccb5b9 436 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 2 432 88.901 T 13-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Theam_0076 3b703d48fa10d218b963910230ccb5b9 436 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 3 429 9.2E-192 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Theam_0076 3b703d48fa10d218b963910230ccb5b9 436 Gene3D G3DSA:3.20.20.540 47 367 1.0E-148 T 13-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Theam_0076 3b703d48fa10d218b963910230ccb5b9 436 Pfam PF01964 Radical SAM ThiC family 3 427 8.7E-197 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Theam_1038 7de5f5209c049d01ea88e6a0f490ff30 141 SUPERFAMILY SSF55729 13 135 3.11E-20 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Theam_1038 7de5f5209c049d01ea88e6a0f490ff30 141 Pfam PF00583 Acetyltransferase (GNAT) family 33 121 3.0E-13 T 13-10-2018 IPR000182 GNAT domain Theam_1038 7de5f5209c049d01ea88e6a0f490ff30 141 Gene3D G3DSA:3.40.630.30 22 135 6.2E-18 T 13-10-2018 Theam_1523 76b93eca2433ef68f9aa216f54190e33 230 Pfam PF02361 Cobalt transport protein 10 198 2.6E-19 T 13-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Theam_0840 53e1accb5064d220edab7b36cb06a054 958 Gene3D G3DSA:3.40.50.300 426 511 4.3E-7 T 13-10-2018 Theam_0840 53e1accb5064d220edab7b36cb06a054 958 Gene3D G3DSA:3.40.50.300 589 746 1.4E-14 T 13-10-2018 Theam_0840 53e1accb5064d220edab7b36cb06a054 958 Pfam PF12705 PD-(D/E)XK nuclease superfamily 810 945 8.0E-8 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Theam_0840 53e1accb5064d220edab7b36cb06a054 958 Pfam PF13361 UvrD-like helicase C-terminal domain 627 727 1.8E-11 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Theam_0840 53e1accb5064d220edab7b36cb06a054 958 Gene3D G3DSA:3.40.50.300 242 380 1.8E-31 T 13-10-2018 Theam_0840 53e1accb5064d220edab7b36cb06a054 958 SUPERFAMILY SSF52540 4 729 1.36E-79 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0840 53e1accb5064d220edab7b36cb06a054 958 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 347 3.5E-51 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Theam_0840 53e1accb5064d220edab7b36cb06a054 958 Pfam PF13361 UvrD-like helicase C-terminal domain 362 524 4.6E-11 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Theam_0840 53e1accb5064d220edab7b36cb06a054 958 Gene3D G3DSA:3.40.50.300 3 152 2.0E-20 T 13-10-2018 Theam_1516 b73b1768bbdb874cfe654e166490012b 290 Gene3D G3DSA:1.10.40.60 98 195 3.3E-34 T 13-10-2018 IPR038072 GspK, central domain superfamily Theam_1516 b73b1768bbdb874cfe654e166490012b 290 SUPERFAMILY SSF158544 100 194 2.48E-20 T 13-10-2018 IPR038072 GspK, central domain superfamily Theam_1516 b73b1768bbdb874cfe654e166490012b 290 Gene3D G3DSA:3.30.1300.30 45 278 3.3E-34 T 13-10-2018 Theam_1516 b73b1768bbdb874cfe654e166490012b 290 SUPERFAMILY SSF81585 194 254 4.51E-10 T 13-10-2018 Theam_1516 b73b1768bbdb874cfe654e166490012b 290 PIRSF PIRSF002786 3 288 2.4E-42 T 13-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 Theam_1516 b73b1768bbdb874cfe654e166490012b 290 Gene3D G3DSA:1.10.40.60 196 255 3.3E-34 T 13-10-2018 IPR038072 GspK, central domain superfamily Theam_1516 b73b1768bbdb874cfe654e166490012b 290 Pfam PF03934 Type II secretion system (T2SS), protein K 37 281 1.4E-46 T 13-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 Theam_1264 1dd218ea96fc0694b6cfa330c1e801b9 95 SMART SM00363 1 64 5.1E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_1264 1dd218ea96fc0694b6cfa330c1e801b9 95 SUPERFAMILY SSF55174 1 80 1.96E-19 T 13-10-2018 Theam_1264 1dd218ea96fc0694b6cfa330c1e801b9 95 Gene3D G3DSA:3.10.290.10 1 92 1.6E-26 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Theam_1264 1dd218ea96fc0694b6cfa330c1e801b9 95 PIRSF PIRSF038881 1 91 1.3E-26 T 13-10-2018 IPR025490 RNA-binding protein, HP1423 type Theam_1264 1dd218ea96fc0694b6cfa330c1e801b9 95 Pfam PF01479 S4 domain 1 47 2.5E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_1470 edfa535810b48a4b4a04af1834d1a687 457 Pfam PF03600 Citrate transporter 40 394 2.7E-53 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Theam_1470 edfa535810b48a4b4a04af1834d1a687 457 PRINTS PR00758 Arsenical pump membrane protein signature 126 150 7.3E-15 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Theam_1470 edfa535810b48a4b4a04af1834d1a687 457 PRINTS PR00758 Arsenical pump membrane protein signature 199 222 7.3E-15 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Theam_1470 edfa535810b48a4b4a04af1834d1a687 457 PRINTS PR00758 Arsenical pump membrane protein signature 303 327 7.3E-15 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Theam_1470 edfa535810b48a4b4a04af1834d1a687 457 PRINTS PR00758 Arsenical pump membrane protein signature 348 370 7.3E-15 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Theam_1470 edfa535810b48a4b4a04af1834d1a687 457 PRINTS PR00758 Arsenical pump membrane protein signature 390 415 7.3E-15 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Theam_0970 af597a96063fb18a43150b71ab5ed366 371 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 13 363 2.2E-152 T 13-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 Theam_0970 af597a96063fb18a43150b71ab5ed366 371 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 11 366 54.036 T 13-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 Theam_0970 af597a96063fb18a43150b71ab5ed366 371 SMART SM00729 60 279 5.0E-4 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_0970 af597a96063fb18a43150b71ab5ed366 371 Gene3D G3DSA:3.20.20.70 9 361 1.0E-56 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0970 af597a96063fb18a43150b71ab5ed366 371 Pfam PF04055 Radical SAM superfamily 64 237 2.2E-17 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0970 af597a96063fb18a43150b71ab5ed366 371 SUPERFAMILY SSF102114 21 355 2.62E-50 T 13-10-2018 Theam_0970 af597a96063fb18a43150b71ab5ed366 371 PIRSF PIRSF004762 1 370 3.0E-126 T 13-10-2018 Theam_0970 af597a96063fb18a43150b71ab5ed366 371 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 57 363 2.6E-119 T 13-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 Theam_1724 305647d1886408cfd015c45ebe4f454f 204 Gene3D G3DSA:3.40.30.10 46 203 1.1E-10 T 13-10-2018 Theam_1724 305647d1886408cfd015c45ebe4f454f 204 Pfam PF00578 AhpC/TSA family 64 177 7.9E-7 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Theam_1724 305647d1886408cfd015c45ebe4f454f 204 SUPERFAMILY SSF52833 64 202 8.41E-12 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Theam_0653 2745d5b4a9eb8ecf32e5125640eef7d0 96 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 72 8.9E-17 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Theam_0653 2745d5b4a9eb8ecf32e5125640eef7d0 96 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 1.2E-11 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Theam_0653 2745d5b4a9eb8ecf32e5125640eef7d0 96 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.2E-11 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Theam_0653 2745d5b4a9eb8ecf32e5125640eef7d0 96 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.2E-11 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Theam_0653 2745d5b4a9eb8ecf32e5125640eef7d0 96 Pfam PF03840 Preprotein translocase SecG subunit 5 71 2.6E-13 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Theam_0930 b686fff37f43dfbdcfe292c731526abd 373 Gene3D G3DSA:3.30.565.10 228 371 4.8E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_0930 b686fff37f43dfbdcfe292c731526abd 373 Gene3D G3DSA:1.10.287.130 176 227 4.8E-25 T 13-10-2018 Theam_0930 b686fff37f43dfbdcfe292c731526abd 373 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 271 372 7.4E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_0930 b686fff37f43dfbdcfe292c731526abd 373 SUPERFAMILY SSF55874 230 372 2.36E-21 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_0930 b686fff37f43dfbdcfe292c731526abd 373 SMART SM00387 270 373 9.5E-14 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_1503 02933bbb4528be2f6752fccdfb50f5f1 314 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 5 310 1.5E-134 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_1503 02933bbb4528be2f6752fccdfb50f5f1 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 129 145 3.9E-43 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_1503 02933bbb4528be2f6752fccdfb50f5f1 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 108 126 3.9E-43 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_1503 02933bbb4528be2f6752fccdfb50f5f1 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 148 161 3.9E-43 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_1503 02933bbb4528be2f6752fccdfb50f5f1 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 83 94 3.9E-43 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_1503 02933bbb4528be2f6752fccdfb50f5f1 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 164 177 3.9E-43 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_1503 02933bbb4528be2f6752fccdfb50f5f1 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 192 201 3.9E-43 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_1503 02933bbb4528be2f6752fccdfb50f5f1 314 Gene3D G3DSA:3.90.226.10 2 312 4.5E-120 T 13-10-2018 Theam_1503 02933bbb4528be2f6752fccdfb50f5f1 314 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 143 1.2E-55 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_1503 02933bbb4528be2f6752fccdfb50f5f1 314 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 311 47.606 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_1503 02933bbb4528be2f6752fccdfb50f5f1 314 SUPERFAMILY SSF52096 7 309 1.04E-97 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Theam_0281 d72e79aa56622c1270247863166e6d1c 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 21 37 0.008 T 13-10-2018 Theam_0281 d72e79aa56622c1270247863166e6d1c 38 SUPERFAMILY SSF57840 1 37 6.67E-17 T 13-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0281 d72e79aa56622c1270247863166e6d1c 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0281 d72e79aa56622c1270247863166e6d1c 38 Pfam PF00444 Ribosomal protein L36 1 37 1.3E-19 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0281 d72e79aa56622c1270247863166e6d1c 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 1.1E-23 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0281 d72e79aa56622c1270247863166e6d1c 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.688 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0122 b2acf7fc981349ff4218b2c112e0896e 316 Pfam PF13525 Outer membrane lipoprotein 25 212 2.4E-25 T 13-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Theam_0122 b2acf7fc981349ff4218b2c112e0896e 316 Gene3D G3DSA:1.25.40.10 19 236 1.1E-37 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0122 b2acf7fc981349ff4218b2c112e0896e 316 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 2 216 1.1E-37 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD Theam_0122 b2acf7fc981349ff4218b2c112e0896e 316 SUPERFAMILY SSF48452 19 149 4.09E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0122 b2acf7fc981349ff4218b2c112e0896e 316 Pfam PF13174 Tetratricopeptide repeat 260 279 0.017 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0747 5da8842e5a7db48a1968b85fe87b091a 654 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 150 4.7E-13 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Theam_0747 5da8842e5a7db48a1968b85fe87b091a 654 SUPERFAMILY SSF56935 33 652 2.45E-67 T 13-10-2018 Theam_0747 5da8842e5a7db48a1968b85fe87b091a 654 Gene3D G3DSA:2.170.130.10 48 164 1.2E-17 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Theam_0747 5da8842e5a7db48a1968b85fe87b091a 654 Pfam PF00593 TonB dependent receptor 270 652 6.8E-24 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Theam_0747 5da8842e5a7db48a1968b85fe87b091a 654 Gene3D G3DSA:2.40.170.20 165 652 1.9E-32 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Theam_1722 64affb63a5d24ae9e0364cf52701c0d6 166 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 13 149 5.5E-38 T 13-10-2018 IPR018639 Domain of unknown function DUF2062 Theam_1336 5a0cfbba41f21e30aae75a0919f4e3d4 109 Pfam PF11756 Nitrous oxide-stimulated promoter 4 101 3.0E-39 T 13-10-2018 IPR020483 Uncharacterised protein family YgbA Theam_1336 5a0cfbba41f21e30aae75a0919f4e3d4 109 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 4 95 3.0E-28 T 13-10-2018 IPR020483 Uncharacterised protein family YgbA Theam_0458 d19782622d31076a3c22d536cbfa54e9 315 Pfam PF05036 Sporulation related domain 29 97 1.4E-8 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Theam_0458 d19782622d31076a3c22d536cbfa54e9 315 Gene3D G3DSA:1.25.40.10 229 297 5.3E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0458 d19782622d31076a3c22d536cbfa54e9 315 SUPERFAMILY SSF110997 28 85 3.4E-5 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Theam_0458 d19782622d31076a3c22d536cbfa54e9 315 Gene3D G3DSA:3.30.70.1070 31 89 1.8E-6 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Theam_1008 c2e948f1da1206ec977baa0d20c14058 517 Gene3D G3DSA:3.30.930.10 157 517 6.6E-138 T 13-10-2018 Theam_1008 c2e948f1da1206ec977baa0d20c14058 517 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 14 505 44.731 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Theam_1008 c2e948f1da1206ec977baa0d20c14058 517 Gene3D G3DSA:2.40.50.140 1 156 2.9E-44 T 13-10-2018 Theam_1008 c2e948f1da1206ec977baa0d20c14058 517 PIRSF PIRSF039101 1 517 1.4E-201 T 13-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Theam_1008 c2e948f1da1206ec977baa0d20c14058 517 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 2.8E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Theam_1008 c2e948f1da1206ec977baa0d20c14058 517 PRINTS PR00982 Lysyl-tRNA synthetase signature 387 403 2.8E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Theam_1008 c2e948f1da1206ec977baa0d20c14058 517 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 2.8E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Theam_1008 c2e948f1da1206ec977baa0d20c14058 517 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 2.8E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Theam_1008 c2e948f1da1206ec977baa0d20c14058 517 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 2.8E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Theam_1008 c2e948f1da1206ec977baa0d20c14058 517 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 11 505 9.9E-204 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Theam_1008 c2e948f1da1206ec977baa0d20c14058 517 SUPERFAMILY SSF55681 161 503 7.37E-122 T 13-10-2018 Theam_1008 c2e948f1da1206ec977baa0d20c14058 517 SUPERFAMILY SSF50249 9 154 6.34E-39 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_1008 c2e948f1da1206ec977baa0d20c14058 517 Pfam PF01336 OB-fold nucleic acid binding domain 67 145 1.8E-16 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Theam_1008 c2e948f1da1206ec977baa0d20c14058 517 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 502 3.5E-86 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_0385 fa0325ec781a28ece75aa282fc56ed64 222 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 134 156 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Theam_0385 fa0325ec781a28ece75aa282fc56ed64 222 Gene3D G3DSA:3.20.20.70 2 217 2.3E-84 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0385 fa0325ec781a28ece75aa282fc56ed64 222 SUPERFAMILY SSF51366 3 215 5.89E-72 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Theam_0385 fa0325ec781a28ece75aa282fc56ed64 222 PIRSF PIRSF001461 1 221 1.2E-95 T 13-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Theam_0385 fa0325ec781a28ece75aa282fc56ed64 222 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 32 46 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Theam_0385 fa0325ec781a28ece75aa282fc56ed64 222 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 201 1.6E-85 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Theam_0385 fa0325ec781a28ece75aa282fc56ed64 222 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 208 1.3E-91 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Theam_0324 c8af79341d6a4cd000d39f365faf3868 124 SUPERFAMILY SSF53927 5 122 4.33E-32 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Theam_0324 c8af79341d6a4cd000d39f365faf3868 124 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 99 4.1E-12 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Theam_0324 c8af79341d6a4cd000d39f365faf3868 124 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 91 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Theam_0324 c8af79341d6a4cd000d39f365faf3868 124 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 6 123 1.8E-34 T 13-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 Theam_0324 c8af79341d6a4cd000d39f365faf3868 124 Gene3D G3DSA:3.40.140.10 1 124 9.1E-37 T 13-10-2018 Theam_0184 56c939f5958d361a9d1599a125f0ef89 260 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 259 3.3E-84 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Theam_0184 56c939f5958d361a9d1599a125f0ef89 260 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 259 34.651 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Theam_0184 56c939f5958d361a9d1599a125f0ef89 260 PIRSF PIRSF000161 1 260 1.3E-83 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Theam_0184 56c939f5958d361a9d1599a125f0ef89 260 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 144 161 - T 13-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Theam_0184 56c939f5958d361a9d1599a125f0ef89 260 SUPERFAMILY SSF55347 120 230 1.09E-34 T 13-10-2018 Theam_0184 56c939f5958d361a9d1599a125f0ef89 260 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 121 258 1.4E-42 T 13-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Theam_0184 56c939f5958d361a9d1599a125f0ef89 260 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 118 1.9E-30 T 13-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Theam_0184 56c939f5958d361a9d1599a125f0ef89 260 Gene3D G3DSA:3.40.50.720 3 258 8.2E-94 T 13-10-2018 Theam_0184 56c939f5958d361a9d1599a125f0ef89 260 SUPERFAMILY SSF51735 1 259 5.92E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0184 56c939f5958d361a9d1599a125f0ef89 260 Gene3D G3DSA:3.30.360.10 120 228 8.2E-94 T 13-10-2018 Theam_1723 2a54f8327f7cde60c497a1f44afcf8e0 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 55 7.9E-20 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_1723 2a54f8327f7cde60c497a1f44afcf8e0 62 Gene3D G3DSA:2.30.170.40 18 62 5.1E-18 T 13-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1723 2a54f8327f7cde60c497a1f44afcf8e0 62 Pfam PF00830 Ribosomal L28 family 3 57 7.8E-20 T 13-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1723 2a54f8327f7cde60c497a1f44afcf8e0 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 61 15.019 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_1723 2a54f8327f7cde60c497a1f44afcf8e0 62 SUPERFAMILY SSF143800 1 61 1.9E-19 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0641 847e3967c5a14b894bf0aec3908b90dc 222 SUPERFAMILY SSF47781 20 89 4.82E-8 T 13-10-2018 IPR010994 RuvA domain 2-like Theam_0641 847e3967c5a14b894bf0aec3908b90dc 222 TIGRFAM TIGR00608 radc: DNA repair protein RadC 12 221 4.7E-61 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 Theam_0641 847e3967c5a14b894bf0aec3908b90dc 222 Gene3D G3DSA:3.40.140.10 98 222 9.2E-40 T 13-10-2018 Theam_0641 847e3967c5a14b894bf0aec3908b90dc 222 Pfam PF04002 RadC-like JAB domain 101 220 4.8E-37 T 13-10-2018 IPR025657 RadC-like JAB domain Theam_0666 055b6a6724754578f50ce328216ed7c1 384 SUPERFAMILY SSF88697 4 156 4.72E-47 T 13-10-2018 IPR015947 PUA-like superfamily Theam_0666 055b6a6724754578f50ce328216ed7c1 384 Gene3D G3DSA:3.40.50.620 171 379 2.3E-96 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_0666 055b6a6724754578f50ce328216ed7c1 384 SUPERFAMILY SSF52374 171 380 3.75E-84 T 13-10-2018 Theam_0666 055b6a6724754578f50ce328216ed7c1 384 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 25 383 46.023 T 13-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Theam_0666 055b6a6724754578f50ce328216ed7c1 384 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 4 378 1.3E-134 T 13-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Theam_0666 055b6a6724754578f50ce328216ed7c1 384 Pfam PF14306 PUA-like domain 2 155 8.7E-47 T 13-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Theam_0666 055b6a6724754578f50ce328216ed7c1 384 Gene3D G3DSA:3.10.400.10 2 158 5.1E-45 T 13-10-2018 Theam_0666 055b6a6724754578f50ce328216ed7c1 384 Pfam PF01747 ATP-sulfurylase 171 379 7.4E-94 T 13-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Theam_0267 a9960507d6d1eae735d28374e5090650 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.2E-58 T 13-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Theam_0267 a9960507d6d1eae735d28374e5090650 122 SUPERFAMILY SSF50193 1 122 7.33E-54 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Theam_0267 a9960507d6d1eae735d28374e5090650 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.785 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Theam_0267 a9960507d6d1eae735d28374e5090650 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 13-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0267 a9960507d6d1eae735d28374e5090650 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.1E-56 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Theam_0267 a9960507d6d1eae735d28374e5090650 122 SMART SM01374 1 122 1.4E-85 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Theam_0267 a9960507d6d1eae735d28374e5090650 122 Gene3D G3DSA:2.40.150.20 1 122 2.9E-56 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Theam_0438 354d7306f55735ed21fa7a47bf4851d6 252 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 106 132 2.1E-43 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Theam_0438 354d7306f55735ed21fa7a47bf4851d6 252 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 13 40 2.1E-43 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Theam_0438 354d7306f55735ed21fa7a47bf4851d6 252 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 88 106 2.1E-43 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Theam_0438 354d7306f55735ed21fa7a47bf4851d6 252 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 157 185 2.1E-43 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Theam_0438 354d7306f55735ed21fa7a47bf4851d6 252 Pfam PF00902 Sec-independent protein translocase protein (TatC) 16 224 4.1E-74 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Theam_0438 354d7306f55735ed21fa7a47bf4851d6 252 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 246 18.376 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Theam_0438 354d7306f55735ed21fa7a47bf4851d6 252 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 15 229 2.6E-69 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Theam_1588 a2146508470dfdae06f32c0823065da1 475 SUPERFAMILY SSF56935 29 313 1.37E-9 T 13-10-2018 Theam_1588 a2146508470dfdae06f32c0823065da1 475 Pfam PF13372 Alginate export 103 330 6.4E-14 T 13-10-2018 IPR025388 Alginate export domain Theam_0868 2af762225c80655777a7dcf5f8c5c250 406 TIGRFAM TIGR01899 cas_TM1807_csm5: CRISPR type III-A/MTUBE-associated RAMP protein Csm5 13 365 2.2E-23 T 13-10-2018 IPR010173 CRISPR-associated protein, TM1807 Theam_0868 2af762225c80655777a7dcf5f8c5c250 406 Pfam PF03787 RAMP superfamily 14 322 8.7E-9 T 13-10-2018 IPR005537 CRISPR type III-associated RAMP protein Theam_0998 58baec7e807153822751d3a0a360a3c6 505 SUPERFAMILY SSF51395 97 489 3.74E-120 T 13-10-2018 Theam_0998 58baec7e807153822751d3a0a360a3c6 505 Gene3D G3DSA:3.20.20.70 83 497 2.5E-128 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0998 58baec7e807153822751d3a0a360a3c6 505 Pfam PF13187 4Fe-4S dicluster domain 21 68 4.2E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_0998 58baec7e807153822751d3a0a360a3c6 505 PIRSF PIRSF500061 6 505 2.2E-188 T 13-10-2018 Theam_0998 58baec7e807153822751d3a0a360a3c6 505 SUPERFAMILY SSF54862 6 74 2.0E-17 T 13-10-2018 Theam_0998 58baec7e807153822751d3a0a360a3c6 505 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 53 64 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0998 58baec7e807153822751d3a0a360a3c6 505 Gene3D G3DSA:3.30.70.20 16 71 4.8E-10 T 13-10-2018 Theam_0998 58baec7e807153822751d3a0a360a3c6 505 PIRSF PIRSF006429 6 503 2.0E-151 T 13-10-2018 IPR024188 Glutamate synthase large subunit-like protein Theam_0998 58baec7e807153822751d3a0a360a3c6 505 Pfam PF01645 Conserved region in glutamate synthase 112 473 1.1E-135 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Theam_1700 702abbc8d416aad19e726e1fe45614d9 293 Gene3D G3DSA:1.10.1670.10 177 267 2.0E-5 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Theam_1700 702abbc8d416aad19e726e1fe45614d9 293 Pfam PF09171 N-glycosylase/DNA lyase 188 254 2.0E-6 T 13-10-2018 IPR015254 N-glycosylase/DNA lyase-like GO:0003906|GO:0016799 Theam_1700 702abbc8d416aad19e726e1fe45614d9 293 SUPERFAMILY SSF48150 80 277 5.44E-8 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Theam_0989 42d0833780d9721c668d8b9826b43aa8 254 Pfam PF02673 Bacitracin resistance protein BacA 6 248 3.7E-81 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Theam_0989 42d0833780d9721c668d8b9826b43aa8 254 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 253 18.312 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Theam_0989 42d0833780d9721c668d8b9826b43aa8 254 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 246 2.6E-72 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Theam_1376 7dc67a8f9dee837cd644898dda44bea0 319 Gene3D G3DSA:1.20.58.340 134 260 1.5E-24 T 13-10-2018 Theam_1376 7dc67a8f9dee837cd644898dda44bea0 319 SUPERFAMILY SSF144083 254 317 2.35E-17 T 13-10-2018 Theam_1376 7dc67a8f9dee837cd644898dda44bea0 319 Gene3D G3DSA:1.20.58.340 262 319 8.1E-18 T 13-10-2018 Theam_1376 7dc67a8f9dee837cd644898dda44bea0 319 Gene3D G3DSA:3.30.460.20 8 127 3.9E-13 T 13-10-2018 Theam_1376 7dc67a8f9dee837cd644898dda44bea0 319 SUPERFAMILY SSF143865 13 252 5.75E-38 T 13-10-2018 Theam_1376 7dc67a8f9dee837cd644898dda44bea0 319 Pfam PF01544 CorA-like Mg2+ transporter protein 36 315 1.1E-57 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Theam_0786 30971093d95a832031eb54608eb1e6bb 340 SMART SM00852 175 285 4.0E-16 T 13-10-2018 IPR001453 MoaB/Mog domain Theam_0786 30971093d95a832031eb54608eb1e6bb 340 SUPERFAMILY SSF53218 173 307 6.81E-29 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Theam_0786 30971093d95a832031eb54608eb1e6bb 340 Gene3D G3DSA:3.40.980.10 148 307 2.5E-28 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Theam_0786 30971093d95a832031eb54608eb1e6bb 340 Pfam PF00994 Probable molybdopterin binding domain 176 288 1.9E-21 T 13-10-2018 IPR001453 MoaB/Mog domain Theam_0786 30971093d95a832031eb54608eb1e6bb 340 Gene3D G3DSA:3.90.105.10 2 58 2.5E-5 T 13-10-2018 Theam_0871 df9213d2182a660b104e648b0cf73106 150 TIGRFAM TIGR01870 cas_TM1810_Csm2: CRISPR type III-A/MTUBE-associated protein Csm2 59 145 2.8E-9 T 13-10-2018 IPR010149 CRISPR-associated protein, Csm2 Type III-A Theam_0871 df9213d2182a660b104e648b0cf73106 150 Pfam PF03750 Csm2 Type III-A 42 145 7.3E-13 T 13-10-2018 IPR010149 CRISPR-associated protein, Csm2 Type III-A Theam_0720 6131cb7c0af70b7fc0c700c2011d51ce 231 SMART SM01211 1 228 1.7E-139 T 13-10-2018 Theam_0720 6131cb7c0af70b7fc0c700c2011d51ce 231 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 226 45.92 T 13-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Theam_0720 6131cb7c0af70b7fc0c700c2011d51ce 231 Gene3D G3DSA:3.40.50.880 1 228 4.0E-70 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Theam_0720 6131cb7c0af70b7fc0c700c2011d51ce 231 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 4 214 2.4E-48 T 13-10-2018 Theam_0720 6131cb7c0af70b7fc0c700c2011d51ce 231 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 226 2.8E-100 T 13-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Theam_0720 6131cb7c0af70b7fc0c700c2011d51ce 231 PIRSF PIRSF001586 1 230 1.7E-89 T 13-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Theam_0720 6131cb7c0af70b7fc0c700c2011d51ce 231 SUPERFAMILY SSF52317 1 226 2.22E-77 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Theam_0913 e4d658b2f820000b0a87086433080ee0 337 SUPERFAMILY SSF53659 1 331 9.05E-103 T 13-10-2018 Theam_0913 e4d658b2f820000b0a87086433080ee0 337 Pfam PF02504 Fatty acid synthesis protein 1 321 4.2E-121 T 13-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Theam_0913 e4d658b2f820000b0a87086433080ee0 337 PIRSF PIRSF002465 1 335 1.2E-128 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Theam_0913 e4d658b2f820000b0a87086433080ee0 337 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 337 147.996 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Theam_0913 e4d658b2f820000b0a87086433080ee0 337 Gene3D G3DSA:3.40.718.10 1 336 3.0E-138 T 13-10-2018 Theam_0913 e4d658b2f820000b0a87086433080ee0 337 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 330 1.4E-120 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Theam_0441 4b34502b62b7c981a5db20bfa44b998e 264 SUPERFAMILY SSF51569 4 252 5.86E-85 T 13-10-2018 Theam_0441 4b34502b62b7c981a5db20bfa44b998e 264 PIRSF PIRSF038992 1 264 6.2E-99 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Theam_0441 4b34502b62b7c981a5db20bfa44b998e 264 TIGRFAM TIGR01949 AroFGH_arch: predicted phospho-2-dehydro-3-deoxyheptonate aldolase 3 260 7.7E-114 T 13-10-2018 IPR010210 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase GO:0009073|GO:0016836 KEGG: 00400+2.2.1.10|MetaCyc: PWY-6160 Theam_0441 4b34502b62b7c981a5db20bfa44b998e 264 SMART SM01133 20 236 5.1E-64 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Theam_0441 4b34502b62b7c981a5db20bfa44b998e 264 Hamap MF_00960 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [aroA']. 2 264 63.628 T 13-10-2018 IPR010210 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase GO:0009073|GO:0016836 KEGG: 00400+2.2.1.10|MetaCyc: PWY-6160 Theam_0441 4b34502b62b7c981a5db20bfa44b998e 264 Gene3D G3DSA:3.20.20.70 1 264 4.1E-98 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0441 4b34502b62b7c981a5db20bfa44b998e 264 Pfam PF01791 DeoC/LacD family aldolase 20 236 1.8E-65 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Theam_0188 ede1395f9386d53d6e444e4f97ba4dd8 863 SUPERFAMILY SSF52540 69 263 2.2E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0188 ede1395f9386d53d6e444e4f97ba4dd8 863 Gene3D G3DSA:3.40.50.300 40 270 1.2E-5 T 13-10-2018 Theam_0306 b21ae98d0081005f7f216be35f3018b9 126 Gene3D G3DSA:3.30.1330.40 1 126 1.4E-45 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Theam_0306 b21ae98d0081005f7f216be35f3018b9 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 124 3.4E-44 T 13-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Theam_0306 b21ae98d0081005f7f216be35f3018b9 126 Pfam PF01042 Endoribonuclease L-PSP 7 124 1.4E-36 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Theam_0306 b21ae98d0081005f7f216be35f3018b9 126 SUPERFAMILY SSF55298 2 126 6.13E-41 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Theam_1598 fb1076f5c633462e38496adc02d751f3 194 Gene3D G3DSA:3.30.230.40 90 194 6.6E-33 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Theam_1598 fb1076f5c633462e38496adc02d751f3 194 Gene3D G3DSA:3.30.230.40 1 89 2.2E-33 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Theam_1598 fb1076f5c633462e38496adc02d751f3 194 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Theam_1598 fb1076f5c633462e38496adc02d751f3 194 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 9.2E-55 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Theam_1598 fb1076f5c633462e38496adc02d751f3 194 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 194 38.235 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Theam_1598 fb1076f5c633462e38496adc02d751f3 194 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Theam_1598 fb1076f5c633462e38496adc02d751f3 194 SUPERFAMILY SSF54211 1 86 1.18E-30 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_1598 fb1076f5c633462e38496adc02d751f3 194 SUPERFAMILY SSF54211 87 179 3.41E-30 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_0282 48812392e0d72605e03a73935f56facc 126 PIRSF PIRSF002134 1 125 4.0E-49 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0282 48812392e0d72605e03a73935f56facc 126 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 29.104 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0282 48812392e0d72605e03a73935f56facc 126 Pfam PF00416 Ribosomal protein S13/S18 3 109 2.3E-35 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0282 48812392e0d72605e03a73935f56facc 126 SUPERFAMILY SSF46946 2 123 7.8E-50 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Theam_0282 48812392e0d72605e03a73935f56facc 126 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 3.8E-55 T 13-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0282 48812392e0d72605e03a73935f56facc 126 Gene3D G3DSA:1.10.8.50 1 72 3.5E-30 T 13-10-2018 Theam_0282 48812392e0d72605e03a73935f56facc 126 Gene3D G3DSA:4.10.910.10 73 126 1.7E-29 T 13-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0282 48812392e0d72605e03a73935f56facc 126 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 13-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0677 4d2bc013b0def5ee5a58693878003eeb 127 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 84 118 8.7E-8 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Theam_0677 4d2bc013b0def5ee5a58693878003eeb 127 Gene3D G3DSA:1.20.120.910 1 125 2.8E-34 T 13-10-2018 Theam_0677 4d2bc013b0def5ee5a58693878003eeb 127 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 89 113 - T 13-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Theam_0677 4d2bc013b0def5ee5a58693878003eeb 127 SUPERFAMILY SSF109635 2 85 6.67E-20 T 13-10-2018 IPR037187 DksA, N-terminal domain superfamily Theam_0677 4d2bc013b0def5ee5a58693878003eeb 127 SUPERFAMILY SSF57716 86 123 5.42E-8 T 13-10-2018 Theam_0130 b4910fdbc2d9b6292b4ea9e3df961ada 195 Pfam PF05103 DivIVA protein 8 58 5.7E-14 T 13-10-2018 IPR007793 DivIVA family Theam_0130 b4910fdbc2d9b6292b4ea9e3df961ada 195 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 40 2.1E-13 T 13-10-2018 IPR019933 DivIVA domain Theam_1324 ff779a4ac9a92f1c4507539479fa59cd 345 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 1 342 74.506 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Theam_1324 ff779a4ac9a92f1c4507539479fa59cd 345 PIRSF PIRSF006004 1 345 2.0E-146 T 13-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Theam_1324 ff779a4ac9a92f1c4507539479fa59cd 345 Gene3D G3DSA:1.10.150.530 2 62 4.3E-23 T 13-10-2018 Theam_1324 ff779a4ac9a92f1c4507539479fa59cd 345 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 4 341 7.3E-137 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Theam_1324 ff779a4ac9a92f1c4507539479fa59cd 345 Pfam PF04055 Radical SAM superfamily 104 273 1.3E-19 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_1324 ff779a4ac9a92f1c4507539479fa59cd 345 SMART SM00729 100 313 0.0012 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_1324 ff779a4ac9a92f1c4507539479fa59cd 345 SUPERFAMILY SSF102114 101 312 1.96E-17 T 13-10-2018 Theam_1324 ff779a4ac9a92f1c4507539479fa59cd 345 Gene3D G3DSA:3.20.20.70 64 327 9.7E-112 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1003 c8094946b88e58dfdeba1fe94b7f5ced 402 Gene3D G3DSA:3.40.50.1100 56 386 4.5E-194 T 13-10-2018 Theam_1003 c8094946b88e58dfdeba1fe94b7f5ced 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 54 380 1.6E-51 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Theam_1003 c8094946b88e58dfdeba1fe94b7f5ced 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 393 54.785 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Theam_1003 c8094946b88e58dfdeba1fe94b7f5ced 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 391 1.1E-196 T 13-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Theam_1003 c8094946b88e58dfdeba1fe94b7f5ced 402 SUPERFAMILY SSF53686 5 392 1.01E-154 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Theam_1003 c8094946b88e58dfdeba1fe94b7f5ced 402 PIRSF PIRSF001413 1 398 3.6E-174 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Theam_1003 c8094946b88e58dfdeba1fe94b7f5ced 402 Gene3D G3DSA:3.40.50.1100 12 209 4.5E-194 T 13-10-2018 Theam_1003 c8094946b88e58dfdeba1fe94b7f5ced 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 84 98 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Theam_1777 a18374a9a26aee0e6ee35344abecd631 477 SUPERFAMILY SSF52743 370 463 3.93E-8 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Theam_1777 a18374a9a26aee0e6ee35344abecd631 477 Gene3D G3DSA:3.40.50.200 335 475 2.7E-5 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Theam_1755 091da85ab1c16bfbe0978daea28d0245 333 Pfam PF06834 TraU protein 30 177 3.1E-6 T 13-10-2018 IPR009649 TraU Theam_0291 6ad1cd881d8b3b3400a3ae85fd504c23 287 Gene3D G3DSA:2.30.140.10 2 58 9.9E-11 T 13-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Theam_0291 6ad1cd881d8b3b3400a3ae85fd504c23 287 SUPERFAMILY SSF53335 29 284 3.71E-80 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_0291 6ad1cd881d8b3b3400a3ae85fd504c23 287 TIGRFAM TIGR00417 speE: spermidine synthase 16 282 8.3E-88 T 13-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Theam_0291 6ad1cd881d8b3b3400a3ae85fd504c23 287 Pfam PF17284 Spermidine synthase tetramerisation domain 29 59 8.2E-10 T 13-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Theam_0291 6ad1cd881d8b3b3400a3ae85fd504c23 287 Gene3D G3DSA:3.40.50.150 59 286 4.1E-73 T 13-10-2018 Theam_0291 6ad1cd881d8b3b3400a3ae85fd504c23 287 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 84 97 - T 13-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Theam_0291 6ad1cd881d8b3b3400a3ae85fd504c23 287 Pfam PF01564 Spermine/spermidine synthase domain 62 240 1.5E-53 T 13-10-2018 Theam_0291 6ad1cd881d8b3b3400a3ae85fd504c23 287 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 2 287 36.372 T 13-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Theam_1176 aeaa72984c5f5e516c76f08a57a45317 674 SUPERFAMILY SSF56519 66 290 1.22E-13 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Theam_1176 aeaa72984c5f5e516c76f08a57a45317 674 Gene3D G3DSA:3.40.710.10 352 545 5.1E-106 T 13-10-2018 Theam_1176 aeaa72984c5f5e516c76f08a57a45317 674 Pfam PF03717 Penicillin-binding Protein dimerisation domain 72 280 9.7E-8 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Theam_1176 aeaa72984c5f5e516c76f08a57a45317 674 Gene3D G3DSA:3.30.450.330 291 635 5.1E-106 T 13-10-2018 Theam_1176 aeaa72984c5f5e516c76f08a57a45317 674 Gene3D G3DSA:3.90.1310.30 65 289 7.1E-16 T 13-10-2018 Theam_1176 aeaa72984c5f5e516c76f08a57a45317 674 SUPERFAMILY SSF56601 290 634 7.57E-91 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Theam_1176 aeaa72984c5f5e516c76f08a57a45317 674 Pfam PF00905 Penicillin binding protein transpeptidase domain 317 630 3.6E-75 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Theam_0910 13b97106c4835a451deff9c0627c664f 153 Gene3D G3DSA:3.40.50.960 1 153 2.3E-65 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Theam_0910 13b97106c4835a451deff9c0627c664f 153 SUPERFAMILY SSF52121 4 152 5.89E-64 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Theam_0910 13b97106c4835a451deff9c0627c664f 153 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 12 150 4.2E-61 T 13-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Theam_0910 13b97106c4835a451deff9c0627c664f 153 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 13 149 1.9E-58 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Theam_0910 13b97106c4835a451deff9c0627c664f 153 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 32.498 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Theam_0565 4ca89c753292084e31ef042eec0fcd03 388 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 44 196 1.7E-37 T 13-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Theam_0565 4ca89c753292084e31ef042eec0fcd03 388 Gene3D G3DSA:3.40.50.2000 201 368 3.5E-38 T 13-10-2018 Theam_0565 4ca89c753292084e31ef042eec0fcd03 388 SUPERFAMILY SSF53756 47 383 9.57E-9 T 13-10-2018 Theam_0565 4ca89c753292084e31ef042eec0fcd03 388 Gene3D G3DSA:3.40.50.11720 31 195 2.4E-31 T 13-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Theam_0789 2594af1bd2a2a150f3d74bca5612571f 237 Gene3D G3DSA:3.40.190.10 99 199 1.1E-55 T 13-10-2018 Theam_0789 2594af1bd2a2a150f3d74bca5612571f 237 SUPERFAMILY SSF53850 23 224 1.73E-49 T 13-10-2018 Theam_0789 2594af1bd2a2a150f3d74bca5612571f 237 Pfam PF13531 Bacterial extracellular solute-binding protein 33 235 7.7E-35 T 13-10-2018 Theam_0789 2594af1bd2a2a150f3d74bca5612571f 237 PIRSF PIRSF004846 2 237 1.1E-50 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Theam_0789 2594af1bd2a2a150f3d74bca5612571f 237 Gene3D G3DSA:3.40.190.10 27 234 1.1E-55 T 13-10-2018 Theam_0789 2594af1bd2a2a150f3d74bca5612571f 237 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 33 223 4.7E-46 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Theam_1712 7c752ed555d0e43bd2b78684f8571d82 251 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 6 238 1.5E-75 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Theam_1712 7c752ed555d0e43bd2b78684f8571d82 251 Gene3D G3DSA:3.40.1210.10 1 251 7.2E-98 T 13-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Theam_1712 7c752ed555d0e43bd2b78684f8571d82 251 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 5 250 38.984 T 13-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Theam_1712 7c752ed555d0e43bd2b78684f8571d82 251 SUPERFAMILY SSF64167 6 249 2.49E-87 T 13-10-2018 Theam_1712 7c752ed555d0e43bd2b78684f8571d82 251 Pfam PF01975 Survival protein SurE 7 188 1.3E-63 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Theam_1398 7c2278337a1865d4abbbfcddc902291f 366 PIRSF PIRSF006809 1 366 4.1E-120 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 Theam_1398 7c2278337a1865d4abbbfcddc902291f 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 257 275 3.6E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_1398 7c2278337a1865d4abbbfcddc902291f 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 191 211 3.6E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_1398 7c2278337a1865d4abbbfcddc902291f 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 212 230 3.6E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_1398 7c2278337a1865d4abbbfcddc902291f 366 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 359 1.2E-116 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 Theam_1398 7c2278337a1865d4abbbfcddc902291f 366 Gene3D G3DSA:3.40.50.11060 11 130 6.0E-35 T 13-10-2018 Theam_1398 7c2278337a1865d4abbbfcddc902291f 366 Pfam PF13167 GTP-binding GTPase N-terminal 21 103 7.8E-25 T 13-10-2018 IPR025121 GTPase HflX, N-terminal Theam_1398 7c2278337a1865d4abbbfcddc902291f 366 Hamap MF_00900 GTPase HflX [hflX]. 22 366 43.771 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 Theam_1398 7c2278337a1865d4abbbfcddc902291f 366 SUPERFAMILY SSF52540 190 362 3.0E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1398 7c2278337a1865d4abbbfcddc902291f 366 Gene3D G3DSA:3.40.50.300 189 365 3.9E-46 T 13-10-2018 Theam_1398 7c2278337a1865d4abbbfcddc902291f 366 Pfam PF16360 GTP-binding GTPase Middle Region 105 183 4.9E-27 T 13-10-2018 IPR032305 GTP-binding protein, middle domain Theam_1398 7c2278337a1865d4abbbfcddc902291f 366 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 189 351 2.7E-14 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Theam_1398 7c2278337a1865d4abbbfcddc902291f 366 Pfam PF01926 50S ribosome-binding GTPase 191 308 2.0E-23 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_0836 96c5a0013479965715638a00bcc6e708 264 Pfam PF13242 HAD-hyrolase-like 180 254 6.6E-11 T 13-10-2018 Theam_0836 96c5a0013479965715638a00bcc6e708 264 SUPERFAMILY SSF56784 3 254 1.76E-41 T 13-10-2018 IPR036412 HAD-like superfamily Theam_0836 96c5a0013479965715638a00bcc6e708 264 Gene3D G3DSA:3.40.50.1000 3 233 3.6E-57 T 13-10-2018 IPR023214 HAD superfamily Theam_0836 96c5a0013479965715638a00bcc6e708 264 Pfam PF13344 Haloacid dehalogenase-like hydrolase 4 105 6.2E-19 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Theam_0836 96c5a0013479965715638a00bcc6e708 264 Gene3D G3DSA:3.40.50.1000 82 180 3.6E-57 T 13-10-2018 IPR023214 HAD superfamily Theam_0836 96c5a0013479965715638a00bcc6e708 264 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 4 231 2.5E-36 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Theam_1079 61d34104c86eaa9da7246c4f613809f3 251 SUPERFAMILY SSF56281 7 221 1.31E-28 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_1079 61d34104c86eaa9da7246c4f613809f3 251 Gene3D G3DSA:3.60.15.10 1 251 1.3E-55 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_1079 61d34104c86eaa9da7246c4f613809f3 251 SMART SM00849 12 205 0.0034 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_1079 61d34104c86eaa9da7246c4f613809f3 251 Pfam PF12706 Beta-lactamase superfamily domain 25 206 4.6E-27 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_0740 2d691f906148157539fe0db3d33ad2aa 152 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 15 136 1.9E-39 T 13-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0740 2d691f906148157539fe0db3d33ad2aa 152 SUPERFAMILY SSF54862 32 138 1.67E-23 T 13-10-2018 Theam_0740 2d691f906148157539fe0db3d33ad2aa 152 Gene3D G3DSA:3.30.70.3270 32 151 4.4E-35 T 13-10-2018 Theam_0740 2d691f906148157539fe0db3d33ad2aa 152 Pfam PF12838 4Fe-4S dicluster domain 58 112 1.3E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_0740 2d691f906148157539fe0db3d33ad2aa 152 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 6 151 26.596 T 13-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0740 2d691f906148157539fe0db3d33ad2aa 152 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 98 109 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0127 8906f3b6a9fbff0980c6a8af4f6ab298 213 ProSitePatterns PS00760 Signal peptidases I lysine active site. 79 91 - T 13-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 Theam_0127 8906f3b6a9fbff0980c6a8af4f6ab298 213 ProSitePatterns PS00501 Signal peptidases I serine active site. 34 41 - T 13-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Theam_0127 8906f3b6a9fbff0980c6a8af4f6ab298 213 Pfam PF10502 Signal peptidase, peptidase S26 154 192 3.4E-8 T 13-10-2018 IPR019533 Peptidase S26 Theam_0127 8906f3b6a9fbff0980c6a8af4f6ab298 213 ProSitePatterns PS00761 Signal peptidases I signature 3. 161 174 - T 13-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Theam_0127 8906f3b6a9fbff0980c6a8af4f6ab298 213 Gene3D G3DSA:2.10.109.10 23 196 8.3E-54 T 13-10-2018 Theam_0127 8906f3b6a9fbff0980c6a8af4f6ab298 213 Gene3D G3DSA:2.170.230.10 88 155 8.3E-54 T 13-10-2018 Theam_0127 8906f3b6a9fbff0980c6a8af4f6ab298 213 SUPERFAMILY SSF51306 23 211 3.35E-61 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Theam_0127 8906f3b6a9fbff0980c6a8af4f6ab298 213 Pfam PF00717 Peptidase S24-like 31 101 2.6E-21 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Theam_0127 8906f3b6a9fbff0980c6a8af4f6ab298 213 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 156 175 3.8E-24 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Theam_0127 8906f3b6a9fbff0980c6a8af4f6ab298 213 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 25 41 3.8E-24 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Theam_0127 8906f3b6a9fbff0980c6a8af4f6ab298 213 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 77 89 3.8E-24 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Theam_0127 8906f3b6a9fbff0980c6a8af4f6ab298 213 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 9 196 4.6E-52 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Theam_0834 75296541c914f4234977ac9a35068db4 204 Pfam PF01914 MarC family integral membrane protein 3 199 8.8E-44 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Theam_0834 75296541c914f4234977ac9a35068db4 204 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 197 1.4E-37 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Theam_0434 879afb6066bd04cdde188da5bbf03cb0 68 Pfam PF01197 Ribosomal protein L31 1 65 9.9E-29 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0434 879afb6066bd04cdde188da5bbf03cb0 68 SUPERFAMILY SSF143800 1 65 2.39E-25 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0434 879afb6066bd04cdde188da5bbf03cb0 68 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 9.5E-27 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0434 879afb6066bd04cdde188da5bbf03cb0 68 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.8E-19 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0434 879afb6066bd04cdde188da5bbf03cb0 68 PRINTS PR01249 Ribosomal protein L31 signature 46 64 3.8E-19 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0434 879afb6066bd04cdde188da5bbf03cb0 68 PRINTS PR01249 Ribosomal protein L31 signature 31 46 3.8E-19 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0434 879afb6066bd04cdde188da5bbf03cb0 68 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 26.647 T 13-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0434 879afb6066bd04cdde188da5bbf03cb0 68 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0434 879afb6066bd04cdde188da5bbf03cb0 68 Gene3D G3DSA:2.30.170.50 1 68 5.1E-28 T 13-10-2018 Theam_0508 5981c1b360da83b3f4eb9b4d7fa5fbb5 272 Pfam PF01578 Cytochrome C assembly protein 69 263 3.2E-37 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Theam_1070 1b40a76601034901083444a1e4a48b10 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 10 21 8.0E-7 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Theam_1070 1b40a76601034901083444a1e4a48b10 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 21 34 8.0E-7 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Theam_1070 1b40a76601034901083444a1e4a48b10 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 8.0E-7 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Theam_1070 1b40a76601034901083444a1e4a48b10 123 Gene3D G3DSA:1.10.1660.10 2 119 9.9E-24 T 13-10-2018 Theam_1070 1b40a76601034901083444a1e4a48b10 123 Pfam PF13411 MerR HTH family regulatory protein 9 75 2.1E-17 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Theam_1070 1b40a76601034901083444a1e4a48b10 123 ProSitePatterns PS00552 MerR-type HTH domain signature. 12 34 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Theam_1070 1b40a76601034901083444a1e4a48b10 123 SUPERFAMILY SSF46955 9 95 2.24E-19 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Theam_1070 1b40a76601034901083444a1e4a48b10 123 SMART SM00422 9 78 4.8E-24 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Theam_1066 565d6172b5d177dfa73700be2cfa5761 228 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 225 31.908 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Theam_1066 565d6172b5d177dfa73700be2cfa5761 228 Pfam PF01168 Alanine racemase, N-terminal domain 24 226 5.9E-25 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Theam_1066 565d6172b5d177dfa73700be2cfa5761 228 Gene3D G3DSA:3.20.20.10 1 228 4.6E-93 T 13-10-2018 IPR029066 PLP-binding barrel Theam_1066 565d6172b5d177dfa73700be2cfa5761 228 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 3 226 1.5E-59 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Theam_1066 565d6172b5d177dfa73700be2cfa5761 228 PIRSF PIRSF004848 1 228 1.3E-80 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Theam_1066 565d6172b5d177dfa73700be2cfa5761 228 SUPERFAMILY SSF51419 1 224 4.19E-79 T 13-10-2018 IPR029066 PLP-binding barrel Theam_1476 cbc264c83c998cd44c1bcf86130a968f 94 Gene3D G3DSA:1.10.10.10 2 90 3.4E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_1476 cbc264c83c998cd44c1bcf86130a968f 94 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 7.1E-15 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1476 cbc264c83c998cd44c1bcf86130a968f 94 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 7.1E-15 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1476 cbc264c83c998cd44c1bcf86130a968f 94 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 7.1E-15 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1476 cbc264c83c998cd44c1bcf86130a968f 94 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 7.1E-15 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1476 cbc264c83c998cd44c1bcf86130a968f 94 SMART SM00418 8 86 2.6E-27 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1476 cbc264c83c998cd44c1bcf86130a968f 94 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 2.7E-17 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_1476 cbc264c83c998cd44c1bcf86130a968f 94 SUPERFAMILY SSF46785 4 86 7.49E-27 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0837 109bd28a211a107d0c42d09f1f7817db 399 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 5.6E-58 T 13-10-2018 Theam_0837 109bd28a211a107d0c42d09f1f7817db 399 PRINTS PR00173 Glutamate-aspartate symporter signature 70 95 5.6E-58 T 13-10-2018 Theam_0837 109bd28a211a107d0c42d09f1f7817db 399 PRINTS PR00173 Glutamate-aspartate symporter signature 221 240 5.6E-58 T 13-10-2018 Theam_0837 109bd28a211a107d0c42d09f1f7817db 399 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 5.6E-58 T 13-10-2018 Theam_0837 109bd28a211a107d0c42d09f1f7817db 399 PRINTS PR00173 Glutamate-aspartate symporter signature 349 369 5.6E-58 T 13-10-2018 Theam_0837 109bd28a211a107d0c42d09f1f7817db 399 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 5.6E-58 T 13-10-2018 Theam_0837 109bd28a211a107d0c42d09f1f7817db 399 SUPERFAMILY SSF118215 6 394 2.75E-107 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Theam_0837 109bd28a211a107d0c42d09f1f7817db 399 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 290 313 - T 13-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site Theam_0837 109bd28a211a107d0c42d09f1f7817db 399 Pfam PF00375 Sodium:dicarboxylate symporter family 7 394 3.4E-124 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Theam_0837 109bd28a211a107d0c42d09f1f7817db 399 Gene3D G3DSA:1.10.3860.10 1 397 1.7E-128 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Theam_1299 d53c390a716fc4e76f05982fd8f57b9f 79 Gene3D G3DSA:3.30.300.20 7 68 3.1E-7 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Theam_1299 d53c390a716fc4e76f05982fd8f57b9f 79 Hamap MF_00088 UPF0109 protein . 4 78 23.478 T 13-10-2018 IPR020627 Uncharacterised protein family UPF0109 Theam_1299 d53c390a716fc4e76f05982fd8f57b9f 79 Pfam PF13083 KH domain 5 77 9.3E-26 T 13-10-2018 Theam_1299 d53c390a716fc4e76f05982fd8f57b9f 79 SUPERFAMILY SSF54814 18 64 1.83E-7 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Theam_1492 bf3907cf66f8959044251550a23ba777 160 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 149 4.5E-15 T 13-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1492 bf3907cf66f8959044251550a23ba777 160 Gene3D G3DSA:1.20.120.1200 4 154 7.0E-15 T 13-10-2018 Theam_0284 0e58388cdbf77b2698a89a156c2893eb 208 Gene3D G3DSA:3.10.290.10 97 193 8.3E-85 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Theam_0284 0e58388cdbf77b2698a89a156c2893eb 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 37.284 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Theam_0284 0e58388cdbf77b2698a89a156c2893eb 208 SUPERFAMILY SSF55174 3 208 7.59E-73 T 13-10-2018 Theam_0284 0e58388cdbf77b2698a89a156c2893eb 208 SMART SM00363 98 158 6.1E-19 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0284 0e58388cdbf77b2698a89a156c2893eb 208 SMART SM01390 3 97 1.9E-46 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Theam_0284 0e58388cdbf77b2698a89a156c2893eb 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 2.6E-31 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Theam_0284 0e58388cdbf77b2698a89a156c2893eb 208 Pfam PF01479 S4 domain 99 145 7.8E-21 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0284 0e58388cdbf77b2698a89a156c2893eb 208 Gene3D G3DSA:1.10.1050.10 6 208 8.3E-85 T 13-10-2018 Theam_0284 0e58388cdbf77b2698a89a156c2893eb 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 13-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0284 0e58388cdbf77b2698a89a156c2893eb 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 1.5E-83 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Theam_0537 59908d0c418b3c124916798dc2432eb6 196 Pfam PF00814 Glycoprotease family 33 122 1.2E-10 T 13-10-2018 IPR000905 Gcp-like domain Theam_0537 59908d0c418b3c124916798dc2432eb6 196 Gene3D G3DSA:3.30.420.40 3 133 3.1E-15 T 13-10-2018 Theam_0537 59908d0c418b3c124916798dc2432eb6 196 SUPERFAMILY SSF53067 1 99 6.47E-13 T 13-10-2018 Theam_0537 59908d0c418b3c124916798dc2432eb6 196 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 185 5.9E-26 T 13-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Theam_0909 c6630d6ea6f06d7a63d57beb8defac27 142 Gene3D G3DSA:1.10.940.10 5 142 3.4E-38 T 13-10-2018 IPR035926 NusB-like superfamily Theam_0909 c6630d6ea6f06d7a63d57beb8defac27 142 Pfam PF01029 NusB family 10 138 2.2E-31 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Theam_0909 c6630d6ea6f06d7a63d57beb8defac27 142 SUPERFAMILY SSF48013 7 139 2.62E-30 T 13-10-2018 IPR035926 NusB-like superfamily Theam_0909 c6630d6ea6f06d7a63d57beb8defac27 142 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 8 139 1.7E-36 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 Theam_0909 c6630d6ea6f06d7a63d57beb8defac27 142 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 6 141 19.913 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 Theam_0600 67423aabdeae992e571405b304f165e8 359 Gene3D G3DSA:3.40.50.2000 22 353 3.1E-59 T 13-10-2018 Theam_0600 67423aabdeae992e571405b304f165e8 359 Pfam PF13439 Glycosyltransferase Family 4 14 163 1.1E-14 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Theam_0600 67423aabdeae992e571405b304f165e8 359 SUPERFAMILY SSF53756 1 357 1.08E-65 T 13-10-2018 Theam_0600 67423aabdeae992e571405b304f165e8 359 Gene3D G3DSA:3.40.50.2000 159 340 3.1E-59 T 13-10-2018 Theam_0600 67423aabdeae992e571405b304f165e8 359 Pfam PF00534 Glycosyl transferases group 1 173 335 1.3E-28 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 2 547 4.9E-143 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 PRINTS PR01038 Arginyl-tRNA synthetase signature 155 168 4.2E-22 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 PRINTS PR01038 Arginyl-tRNA synthetase signature 298 319 4.2E-22 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 PRINTS PR01038 Arginyl-tRNA synthetase signature 116 131 4.2E-22 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 PRINTS PR01038 Arginyl-tRNA synthetase signature 131 147 4.2E-22 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 Pfam PF05746 DALR anticodon binding domain 429 547 2.1E-36 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 SMART SM00836 429 547 2.2E-51 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 SUPERFAMILY SSF47323 423 547 3.73E-34 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 Gene3D G3DSA:1.10.730.10 424 547 3.3E-172 T 13-10-2018 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 SMART SM01016 3 89 1.7E-35 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 SUPERFAMILY SSF52374 110 439 3.38E-94 T 13-10-2018 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 Gene3D G3DSA:3.40.50.620 116 423 3.3E-172 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 SUPERFAMILY SSF55190 6 101 4.84E-24 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 Pfam PF00750 tRNA synthetases class I (R) 111 390 2.5E-19 T 13-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 126 135 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 89 1.5E-24 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 Gene3D G3DSA:3.30.1360.70 1 104 2.4E-24 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Theam_1115 d91f3ccd5eecfbc532449d9251a22c0d 547 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 547 27.377 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Theam_1745 e062ed28c1d78a5e147891385b8e5455 233 SMART SM00267 84 233 2.5E-25 T 13-10-2018 IPR000160 GGDEF domain Theam_1745 e062ed28c1d78a5e147891385b8e5455 233 Gene3D G3DSA:3.30.70.270 86 232 2.5E-34 T 13-10-2018 Theam_1745 e062ed28c1d78a5e147891385b8e5455 233 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 91 229 2.6E-27 T 13-10-2018 IPR000160 GGDEF domain Theam_1745 e062ed28c1d78a5e147891385b8e5455 233 Pfam PF00990 Diguanylate cyclase, GGDEF domain 92 229 9.9E-29 T 13-10-2018 IPR000160 GGDEF domain Theam_1745 e062ed28c1d78a5e147891385b8e5455 233 SUPERFAMILY SSF55073 95 228 5.76E-32 T 13-10-2018 IPR029787 Nucleotide cyclase Theam_1667 446dbfbc9940c36071fd517bd2ecb36c 255 Gene3D G3DSA:2.40.30.90 164 255 4.5E-10 T 13-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal Theam_1667 446dbfbc9940c36071fd517bd2ecb36c 255 SUPERFAMILY SSF102522 3 158 9.15E-37 T 13-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal Theam_1667 446dbfbc9940c36071fd517bd2ecb36c 255 Gene3D G3DSA:3.40.50.10790 1 158 8.9E-41 T 13-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal Theam_1667 446dbfbc9940c36071fd517bd2ecb36c 255 SUPERFAMILY SSF101852 170 254 1.44E-5 T 13-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal Theam_1667 446dbfbc9940c36071fd517bd2ecb36c 255 PIRSF PIRSF006779 1 255 3.4E-47 T 13-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase Theam_1667 446dbfbc9940c36071fd517bd2ecb36c 255 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 5 251 6.0E-51 T 13-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase Theam_0270 b0fcbc11440e5f84641a8566cf8bb2e1 61 SUPERFAMILY SSF57716 5 61 5.35E-21 T 13-10-2018 Theam_0270 b0fcbc11440e5f84641a8566cf8bb2e1 61 Gene3D G3DSA:4.10.830.10 1 61 1.1E-30 T 13-10-2018 Theam_0270 b0fcbc11440e5f84641a8566cf8bb2e1 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 13-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0270 b0fcbc11440e5f84641a8566cf8bb2e1 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 26.37 T 13-10-2018 IPR023053 Ribosomal protein S14, type Z Theam_0270 b0fcbc11440e5f84641a8566cf8bb2e1 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 6.8E-26 T 13-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0084 6329d201a92a93926f37076fb376a2a5 324 Gene3D G3DSA:3.40.50.720 5 298 5.5E-104 T 13-10-2018 Theam_0084 6329d201a92a93926f37076fb376a2a5 324 PRINTS PR01713 Nucleotide sugar epimerase signature 238 253 1.9E-23 T 13-10-2018 Theam_0084 6329d201a92a93926f37076fb376a2a5 324 PRINTS PR01713 Nucleotide sugar epimerase signature 277 294 1.9E-23 T 13-10-2018 Theam_0084 6329d201a92a93926f37076fb376a2a5 324 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 1.9E-23 T 13-10-2018 Theam_0084 6329d201a92a93926f37076fb376a2a5 324 PRINTS PR01713 Nucleotide sugar epimerase signature 30 46 1.9E-23 T 13-10-2018 Theam_0084 6329d201a92a93926f37076fb376a2a5 324 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 307 1.2E-62 T 13-10-2018 IPR016040 NAD(P)-binding domain Theam_0084 6329d201a92a93926f37076fb376a2a5 324 SUPERFAMILY SSF51735 1 316 2.66E-98 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0084 6329d201a92a93926f37076fb376a2a5 324 Gene3D G3DSA:3.90.25.10 180 310 5.5E-104 T 13-10-2018 Theam_0682 9df70c580d67f6b0dc740aadb436b737 1067 Gene3D G3DSA:3.30.420.40 5 266 1.5E-54 T 13-10-2018 Theam_0682 9df70c580d67f6b0dc740aadb436b737 1067 SUPERFAMILY SSF53067 333 596 3.96E-34 T 13-10-2018 Theam_0682 9df70c580d67f6b0dc740aadb436b737 1067 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 722 945 2.4E-50 T 13-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 Theam_0682 9df70c580d67f6b0dc740aadb436b737 1067 Gene3D G3DSA:3.30.420.40 334 596 3.4E-68 T 13-10-2018 Theam_0682 9df70c580d67f6b0dc740aadb436b737 1067 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 266 6.9E-21 T 13-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Theam_0682 9df70c580d67f6b0dc740aadb436b737 1067 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 334 596 2.8E-52 T 13-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Theam_0682 9df70c580d67f6b0dc740aadb436b737 1067 Gene3D G3DSA:3.30.420.40 431 579 3.4E-68 T 13-10-2018 Theam_0682 9df70c580d67f6b0dc740aadb436b737 1067 SUPERFAMILY SSF53067 3 266 3.58E-31 T 13-10-2018 Theam_0682 9df70c580d67f6b0dc740aadb436b737 1067 Gene3D G3DSA:3.30.420.40 94 252 1.5E-54 T 13-10-2018 Theam_1342 80c4cd5cf30055678cf39f7391e58235 215 PIRSF PIRSF000709 1 187 3.2E-18 T 13-10-2018 Theam_1342 80c4cd5cf30055678cf39f7391e58235 215 Gene3D G3DSA:3.40.50.1240 1 211 2.2E-74 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Theam_1342 80c4cd5cf30055678cf39f7391e58235 215 SMART SM00855 3 158 1.6E-25 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Theam_1342 80c4cd5cf30055678cf39f7391e58235 215 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 4 183 6.2E-51 T 13-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Theam_1342 80c4cd5cf30055678cf39f7391e58235 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 194 1.1E-70 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Theam_1342 80c4cd5cf30055678cf39f7391e58235 215 SUPERFAMILY SSF53254 1 205 9.69E-69 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 Gene3D G3DSA:3.40.50.1440 8 222 1.2E-82 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 13 334 2.5E-130 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 SMART SM00864 15 207 1.9E-112 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 Gene3D G3DSA:3.30.1330.20 223 334 5.5E-35 T 13-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 Pfam PF12327 FtsZ family, C-terminal domain 224 320 1.6E-28 T 13-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 175 1.6E-42 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 ProSitePatterns PS01135 FtsZ protein signature 2. 99 120 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 SUPERFAMILY SSF55307 206 322 4.12E-39 T 13-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 PRINTS PR00423 Cell division protein FtsZ signature 191 213 3.2E-50 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 PRINTS PR00423 Cell division protein FtsZ signature 100 120 3.2E-50 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 PRINTS PR00423 Cell division protein FtsZ signature 214 235 3.2E-50 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 PRINTS PR00423 Cell division protein FtsZ signature 128 149 3.2E-50 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 SMART SM00865 209 328 2.3E-50 T 13-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 ProSitePatterns PS01134 FtsZ protein signature 1. 46 80 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 SUPERFAMILY SSF52490 16 207 3.92E-71 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Theam_0849 05b9d4d8c1675720fc98ba0cc5c27e80 370 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 361 38.245 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Theam_1533 f897f13a7eea351d7689978d5e8c8971 88 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 84 4.4E-19 T 13-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Theam_1533 f897f13a7eea351d7689978d5e8c8971 88 Gene3D G3DSA:3.30.70.240 1 85 3.6E-25 T 13-10-2018 Theam_1533 f897f13a7eea351d7689978d5e8c8971 88 SUPERFAMILY SSF143430 1 72 1.01E-22 T 13-10-2018 Theam_1533 f897f13a7eea351d7689978d5e8c8971 88 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 88 16.867 T 13-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Theam_1533 f897f13a7eea351d7689978d5e8c8971 88 PIRSF PIRSF032582 1 87 1.2E-20 T 13-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Theam_1533 f897f13a7eea351d7689978d5e8c8971 88 Pfam PF09827 CRISPR associated protein Cas2 1 70 2.5E-22 T 13-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Theam_1716 60d01236f127ecbbef09b2b009ed0dda 426 SUPERFAMILY SSF50156 193 272 4.34E-19 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Theam_1716 60d01236f127ecbbef09b2b009ed0dda 426 SMART SM00228 111 178 0.01 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Theam_1716 60d01236f127ecbbef09b2b009ed0dda 426 SMART SM00228 193 262 1.2E-12 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Theam_1716 60d01236f127ecbbef09b2b009ed0dda 426 Pfam PF13180 PDZ domain 206 270 9.8E-13 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Theam_1716 60d01236f127ecbbef09b2b009ed0dda 426 Gene3D G3DSA:2.30.42.10 124 203 9.7E-14 T 13-10-2018 Theam_1716 60d01236f127ecbbef09b2b009ed0dda 426 Gene3D G3DSA:2.30.42.10 204 289 2.1E-26 T 13-10-2018 Theam_1716 60d01236f127ecbbef09b2b009ed0dda 426 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 425 3.3E-111 T 13-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 Theam_1716 60d01236f127ecbbef09b2b009ed0dda 426 Pfam PF02163 Peptidase family M50 5 412 1.2E-87 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Theam_1716 60d01236f127ecbbef09b2b009ed0dda 426 SUPERFAMILY SSF50156 137 200 1.58E-13 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Theam_0369 e87dc7c1c51c85398d00ec6c16ddf53a 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 6 307 2.7E-88 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0369 e87dc7c1c51c85398d00ec6c16ddf53a 314 Pfam PF01479 S4 domain 9 55 6.6E-15 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0369 e87dc7c1c51c85398d00ec6c16ddf53a 314 SMART SM00363 9 73 1.1E-18 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0369 e87dc7c1c51c85398d00ec6c16ddf53a 314 Gene3D G3DSA:3.10.290.10 3 63 1.7E-18 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Theam_0369 e87dc7c1c51c85398d00ec6c16ddf53a 314 SUPERFAMILY SSF55174 7 95 1.24E-15 T 13-10-2018 Theam_0369 e87dc7c1c51c85398d00ec6c16ddf53a 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 128 142 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0369 e87dc7c1c51c85398d00ec6c16ddf53a 314 Pfam PF00849 RNA pseudouridylate synthase 82 238 9.6E-32 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0369 e87dc7c1c51c85398d00ec6c16ddf53a 314 Gene3D G3DSA:3.30.2350.10 75 310 5.0E-69 T 13-10-2018 Theam_0369 e87dc7c1c51c85398d00ec6c16ddf53a 314 SUPERFAMILY SSF55120 67 308 4.08E-71 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0875 35d0e466a93a274420003b616cb8b3d5 229 Pfam PF01578 Cytochrome C assembly protein 21 225 1.0E-13 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Theam_0529 714a58a862fbede27a8145132c63ae9e 517 PIRSF PIRSF006060 1 445 1.6E-57 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Theam_0529 714a58a862fbede27a8145132c63ae9e 517 Pfam PF13520 Amino acid permease 7 410 8.8E-32 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Theam_0529 714a58a862fbede27a8145132c63ae9e 517 Gene3D G3DSA:1.20.1740.10 2 437 1.5E-97 T 13-10-2018 Theam_1232 d09b7cba25ea81e4740d80698f6e5b12 280 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 223 234 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_1232 d09b7cba25ea81e4740d80698f6e5b12 280 Gene3D G3DSA:3.30.70.20 193 244 2.7E-9 T 13-10-2018 Theam_1232 d09b7cba25ea81e4740d80698f6e5b12 280 Pfam PF12801 4Fe-4S binding domain 125 158 0.0099 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_1232 d09b7cba25ea81e4740d80698f6e5b12 280 Pfam PF12801 4Fe-4S binding domain 57 67 120.0 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_1232 d09b7cba25ea81e4740d80698f6e5b12 280 Pfam PF12801 4Fe-4S binding domain 74 116 6.0E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_1232 d09b7cba25ea81e4740d80698f6e5b12 280 Pfam PF12801 4Fe-4S binding domain 182 212 2.5E-5 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_1232 d09b7cba25ea81e4740d80698f6e5b12 280 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 248 259 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_1232 d09b7cba25ea81e4740d80698f6e5b12 280 SUPERFAMILY SSF54862 78 260 4.84E-13 T 13-10-2018 Theam_1669 befa96304d693f26cf7ae4d4caa34e06 208 SUPERFAMILY SSF53335 4 174 1.4E-32 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_1669 befa96304d693f26cf7ae4d4caa34e06 208 Pfam PF02527 rRNA small subunit methyltransferase G 20 174 2.7E-43 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Theam_1669 befa96304d693f26cf7ae4d4caa34e06 208 Gene3D G3DSA:3.40.50.150 1 207 1.4E-52 T 13-10-2018 Theam_1669 befa96304d693f26cf7ae4d4caa34e06 208 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 12 189 23.535 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Theam_1669 befa96304d693f26cf7ae4d4caa34e06 208 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 24 175 5.2E-42 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Theam_1669 befa96304d693f26cf7ae4d4caa34e06 208 PIRSF PIRSF003078 1 205 6.1E-46 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Theam_0934 9d37c0922a887df1853bdc71a8260f39 270 Pfam PF14358 Domain of unknown function (DUF4405) 5 71 1.6E-15 T 13-10-2018 IPR025517 Domain of unknown function DUF4405 Theam_0975 c5c7919f1299dedcbae62bbe008a5e20 429 SUPERFAMILY SSF53335 144 409 7.08E-77 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_0975 c5c7919f1299dedcbae62bbe008a5e20 429 Gene3D G3DSA:3.40.50.150 143 414 5.5E-99 T 13-10-2018 Theam_0975 c5c7919f1299dedcbae62bbe008a5e20 429 PIRSF PIRSF003085 10 427 3.6E-126 T 13-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 Theam_0975 c5c7919f1299dedcbae62bbe008a5e20 429 Pfam PF02353 Mycolic acid cyclopropane synthetase 135 404 4.1E-95 T 13-10-2018 Theam_0974 8804b657fc5062ae3044fa64edf32d65 403 Gene3D G3DSA:3.40.50.10490 16 395 1.2E-105 T 13-10-2018 Theam_0974 8804b657fc5062ae3044fa64edf32d65 403 PRINTS PR00662 Glucose-6-phosphate isomerase signature 168 186 2.5E-14 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0974 8804b657fc5062ae3044fa64edf32d65 403 PRINTS PR00662 Glucose-6-phosphate isomerase signature 61 80 2.5E-14 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0974 8804b657fc5062ae3044fa64edf32d65 403 PRINTS PR00662 Glucose-6-phosphate isomerase signature 368 381 2.5E-14 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0974 8804b657fc5062ae3044fa64edf32d65 403 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 354 2.5E-14 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0974 8804b657fc5062ae3044fa64edf32d65 403 PRINTS PR00662 Glucose-6-phosphate isomerase signature 354 368 2.5E-14 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0974 8804b657fc5062ae3044fa64edf32d65 403 Pfam PF00342 Phosphoglucose isomerase 60 390 7.4E-27 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0974 8804b657fc5062ae3044fa64edf32d65 403 SUPERFAMILY SSF53697 43 397 4.67E-93 T 13-10-2018 Theam_0974 8804b657fc5062ae3044fa64edf32d65 403 Gene3D G3DSA:3.40.50.10490 41 192 1.2E-105 T 13-10-2018 Theam_1505 3cc5271e3d1a8e6102689b08389378aa 417 SUPERFAMILY SSF52540 68 355 4.5E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1505 3cc5271e3d1a8e6102689b08389378aa 417 Pfam PF00270 DEAD/DEAH box helicase 25 190 2.1E-48 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Theam_1505 3cc5271e3d1a8e6102689b08389378aa 417 SMART SM00490 254 335 7.6E-37 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_1505 3cc5271e3d1a8e6102689b08389378aa 417 Pfam PF00271 Helicase conserved C-terminal domain 226 335 5.3E-34 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_1505 3cc5271e3d1a8e6102689b08389378aa 417 Gene3D G3DSA:3.40.50.300 212 406 3.5E-55 T 13-10-2018 Theam_1505 3cc5271e3d1a8e6102689b08389378aa 417 SMART SM00487 20 218 1.2E-62 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Theam_1505 3cc5271e3d1a8e6102689b08389378aa 417 Gene3D G3DSA:3.40.50.300 1 207 8.8E-72 T 13-10-2018 Theam_0927 b3a6485e5e1aa8babb632a1439501a46 643 Pfam PF00350 Dynamin family 75 235 1.2E-22 T 13-10-2018 IPR022812 Dynamin superfamily Theam_0927 b3a6485e5e1aa8babb632a1439501a46 643 SUPERFAMILY SSF52540 61 282 2.53E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0927 b3a6485e5e1aa8babb632a1439501a46 643 Gene3D G3DSA:3.40.50.300 75 309 1.1E-38 T 13-10-2018 Theam_0714 c591559aa332606b693da471387cd832 519 Gene3D G3DSA:3.90.700.10 240 339 1.5E-135 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_0714 c591559aa332606b693da471387cd832 519 Pfam PF02910 Fumarate reductase flavoprotein C-term 468 508 1.8E-7 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_0714 c591559aa332606b693da471387cd832 519 Gene3D G3DSA:1.20.58.100 416 513 1.1E-22 T 13-10-2018 Theam_0714 c591559aa332606b693da471387cd832 519 SUPERFAMILY SSF51905 12 402 3.92E-64 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0714 c591559aa332606b693da471387cd832 519 SUPERFAMILY SSF46977 428 513 3.14E-21 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_0714 c591559aa332606b693da471387cd832 519 Gene3D G3DSA:3.50.50.60 18 395 1.5E-135 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0714 c591559aa332606b693da471387cd832 519 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 17 498 1.1E-152 T 13-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 Theam_0714 c591559aa332606b693da471387cd832 519 PIRSF PIRSF000171 465 517 0.34 T 13-10-2018 Theam_0714 c591559aa332606b693da471387cd832 519 PIRSF PIRSF000171 8 403 1.8E-28 T 13-10-2018 Theam_0714 c591559aa332606b693da471387cd832 519 SUPERFAMILY SSF56425 230 344 1.47E-33 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_0714 c591559aa332606b693da471387cd832 519 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 19 38 5.5E-7 T 13-10-2018 Theam_0714 c591559aa332606b693da471387cd832 519 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 5.5E-7 T 13-10-2018 Theam_0714 c591559aa332606b693da471387cd832 519 Pfam PF00890 FAD binding domain 18 384 7.0E-86 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_0825 39a2c830edf027f68f3e082134d3fad8 213 Pfam PF01634 ATP phosphoribosyltransferase 51 207 1.7E-51 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Theam_0825 39a2c830edf027f68f3e082134d3fad8 213 Gene3D G3DSA:3.40.190.10 5 199 1.1E-71 T 13-10-2018 Theam_0825 39a2c830edf027f68f3e082134d3fad8 213 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 186 3.8E-60 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Theam_0825 39a2c830edf027f68f3e082134d3fad8 213 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 3 210 51.741 T 13-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Theam_0825 39a2c830edf027f68f3e082134d3fad8 213 Gene3D G3DSA:3.40.190.10 92 178 1.1E-71 T 13-10-2018 Theam_0825 39a2c830edf027f68f3e082134d3fad8 213 SUPERFAMILY SSF53850 3 208 2.39E-64 T 13-10-2018 Theam_0867 d88ef251f2339c88311aaa01e9c5e2fa 275 Pfam PF10040 CRISPR-associated endoribonuclease Cas6 128 244 1.9E-19 T 13-10-2018 IPR019267 CRISPR-associated protein Cas6, C-terminal Theam_0867 d88ef251f2339c88311aaa01e9c5e2fa 275 Gene3D G3DSA:3.30.70.1890 2 115 3.7E-6 T 13-10-2018 Theam_0867 d88ef251f2339c88311aaa01e9c5e2fa 275 Gene3D G3DSA:3.30.70.1900 116 246 1.8E-38 T 13-10-2018 Theam_0867 d88ef251f2339c88311aaa01e9c5e2fa 275 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 54 244 7.1E-18 T 13-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Theam_1391 1846da57d1b5aa3242559058d3f42feb 157 SUPERFAMILY SSF103196 5 130 4.53E-20 T 13-10-2018 Theam_1391 1846da57d1b5aa3242559058d3f42feb 157 Gene3D G3DSA:3.30.450.30 1 132 1.6E-30 T 13-10-2018 Theam_1391 1846da57d1b5aa3242559058d3f42feb 157 SMART SM00960 12 103 6.5E-7 T 13-10-2018 IPR004942 Roadblock/LAMTOR2 domain Theam_1391 1846da57d1b5aa3242559058d3f42feb 157 Pfam PF03259 Roadblock/LC7 domain 14 103 1.3E-11 T 13-10-2018 IPR004942 Roadblock/LAMTOR2 domain Theam_1355 c4e0561e8feab4cd9445e2cca0e5adae 142 Gene3D G3DSA:3.40.30.10 40 142 1.2E-21 T 13-10-2018 Theam_1355 c4e0561e8feab4cd9445e2cca0e5adae 142 SUPERFAMILY SSF52833 58 141 2.62E-24 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Theam_1355 c4e0561e8feab4cd9445e2cca0e5adae 142 Pfam PF00085 Thioredoxin 59 141 7.0E-17 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 Theam_1170 7c44317ff707c6486f252490f94562ad 200 Pfam PF13036 Peptidoglycan-synthase activator LpoB 42 189 1.1E-36 T 13-10-2018 IPR014094 Penicillin-binding protein activator LpoB Theam_1170 7c44317ff707c6486f252490f94562ad 200 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 4 191 1.8E-39 T 13-10-2018 IPR014094 Penicillin-binding protein activator LpoB Theam_1313 fe2d8a85e31558a16d284074cf66908c 345 Gene3D G3DSA:2.70.210.12 1 159 1.4E-66 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily Theam_1313 fe2d8a85e31558a16d284074cf66908c 345 PIRSF PIRSF002401 1 344 1.1E-140 T 13-10-2018 IPR035101 GTP-binding protein, Obg-type Theam_1313 fe2d8a85e31558a16d284074cf66908c 345 SUPERFAMILY SSF52540 162 332 1.27E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1313 fe2d8a85e31558a16d284074cf66908c 345 Gene3D G3DSA:3.40.50.300 160 342 1.8E-53 T 13-10-2018 Theam_1313 fe2d8a85e31558a16d284074cf66908c 345 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 328 6.0E-142 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Theam_1313 fe2d8a85e31558a16d284074cf66908c 345 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 13-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Theam_1313 fe2d8a85e31558a16d284074cf66908c 345 Pfam PF01926 50S ribosome-binding GTPase 162 282 5.6E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_1313 fe2d8a85e31558a16d284074cf66908c 345 Pfam PF01018 GTP1/OBG 5 159 3.8E-65 T 13-10-2018 IPR006169 GTP1/OBG domain Theam_1313 fe2d8a85e31558a16d284074cf66908c 345 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 184 202 3.1E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_1313 fe2d8a85e31558a16d284074cf66908c 345 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.1E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_1313 fe2d8a85e31558a16d284074cf66908c 345 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.1E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_1313 fe2d8a85e31558a16d284074cf66908c 345 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 163 183 3.1E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_1313 fe2d8a85e31558a16d284074cf66908c 345 Hamap MF_01454 GTPase Obg [obg]. 3 330 49.355 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Theam_1313 fe2d8a85e31558a16d284074cf66908c 345 SUPERFAMILY SSF82051 4 159 3.4E-58 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily Theam_1568 1fabc2ce02bb7c4312c80b5963c059a3 172 Hamap MF_00039 Putative adenylate kinase. 1 162 24.234 T 13-10-2018 IPR020618 Adenylate kinase isoenzyme 6 GO:0004017|GO:0005524 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Theam_1568 1fabc2ce02bb7c4312c80b5963c059a3 172 SUPERFAMILY SSF52540 2 154 2.87E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1568 1fabc2ce02bb7c4312c80b5963c059a3 172 Gene3D G3DSA:3.40.50.300 1 170 4.0E-43 T 13-10-2018 Theam_1568 1fabc2ce02bb7c4312c80b5963c059a3 172 Pfam PF13238 AAA domain 3 116 1.2E-19 T 13-10-2018 Theam_1566 071f3f08ba10f979325f2b983047e8a9 186 SUPERFAMILY SSF54637 17 141 6.05E-34 T 13-10-2018 IPR029069 HotDog domain superfamily Theam_1566 071f3f08ba10f979325f2b983047e8a9 186 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 18 126 7.8E-21 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Theam_1566 071f3f08ba10f979325f2b983047e8a9 186 Pfam PF03061 Thioesterase superfamily 29 113 1.4E-13 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Theam_1566 071f3f08ba10f979325f2b983047e8a9 186 Gene3D G3DSA:3.10.129.10 13 147 2.2E-34 T 13-10-2018 Theam_1608 36b0910db732e77edc153593f1ca6bd0 282 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 127 228 1.2E-30 T 13-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 Theam_1608 36b0910db732e77edc153593f1ca6bd0 282 Gene3D G3DSA:3.40.50.150 1 243 6.4E-61 T 13-10-2018 Theam_1608 36b0910db732e77edc153593f1ca6bd0 282 SUPERFAMILY SSF53335 42 213 2.46E-10 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_0256 0129e29fbda8dce74ba3fe40bad4bb42 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 25.76 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0256 0129e29fbda8dce74ba3fe40bad4bb42 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 13-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0256 0129e29fbda8dce74ba3fe40bad4bb42 103 SMART SM01403 7 101 3.9E-51 T 13-10-2018 IPR027486 Ribosomal protein S10 domain Theam_0256 0129e29fbda8dce74ba3fe40bad4bb42 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 5 101 2.3E-42 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0256 0129e29fbda8dce74ba3fe40bad4bb42 103 SUPERFAMILY SSF54999 5 102 7.06E-36 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Theam_0256 0129e29fbda8dce74ba3fe40bad4bb42 103 Gene3D G3DSA:3.30.70.600 1 103 1.2E-34 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Theam_0256 0129e29fbda8dce74ba3fe40bad4bb42 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 7.8E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0256 0129e29fbda8dce74ba3fe40bad4bb42 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 7.8E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0256 0129e29fbda8dce74ba3fe40bad4bb42 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 7.8E-18 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0256 0129e29fbda8dce74ba3fe40bad4bb42 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 5.2E-33 T 13-10-2018 IPR027486 Ribosomal protein S10 domain Theam_0664 72231bcca966fff240eb9a564e3c9bc3 590 Gene3D G3DSA:3.30.70.1450 214 290 1.4E-14 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Theam_0664 72231bcca966fff240eb9a564e3c9bc3 590 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 536 552 - T 13-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 Theam_0664 72231bcca966fff240eb9a564e3c9bc3 590 Gene3D G3DSA:3.30.70.1450 304 375 1.2E-13 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Theam_0664 72231bcca966fff240eb9a564e3c9bc3 590 Pfam PF02080 TrkA-C domain 307 365 9.5E-11 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Theam_0664 72231bcca966fff240eb9a564e3c9bc3 590 Pfam PF02080 TrkA-C domain 222 283 2.3E-10 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Theam_0664 72231bcca966fff240eb9a564e3c9bc3 590 SUPERFAMILY SSF116726 206 288 4.84E-18 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Theam_0664 72231bcca966fff240eb9a564e3c9bc3 590 Pfam PF03600 Citrate transporter 18 533 1.1E-37 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Theam_0664 72231bcca966fff240eb9a564e3c9bc3 590 SUPERFAMILY SSF116726 300 381 4.32E-17 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Theam_0919 8450c29f6c485f154bc79212e9760fd4 293 SUPERFAMILY SSF51730 3 284 3.73E-62 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like Theam_0919 8450c29f6c485f154bc79212e9760fd4 293 Gene3D G3DSA:3.20.20.220 4 285 8.7E-46 T 13-10-2018 Theam_0919 8450c29f6c485f154bc79212e9760fd4 293 Pfam PF02219 Methylenetetrahydrofolate reductase 3 268 1.4E-27 T 13-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 SUPERFAMILY SSF53671 1 305 2.88E-112 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 142 1.2E-50 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 Gene3D G3DSA:3.40.50.1370 2 131 4.9E-126 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 304 3.1E-136 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 148 301 3.4E-63 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 305 83.438 T 13-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 221 231 1.0E-31 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 45 59 1.0E-31 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 78 91 1.0E-31 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 283 294 1.0E-31 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 118 132 1.0E-31 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 47 54 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 Gene3D G3DSA:3.40.50.1370 132 299 4.9E-126 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 2.4E-29 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 2.4E-29 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 2.4E-29 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Theam_1697 a5ffbd4b6e627bccde3785c72e29b8b6 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 2.4E-29 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Theam_0675 a4b1e0326e173a56289bbd42472a4e21 208 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 2 208 4.2E-96 T 13-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Theam_0675 a4b1e0326e173a56289bbd42472a4e21 208 Pfam PF02397 Bacterial sugar transferase 9 202 1.9E-74 T 13-10-2018 IPR003362 Bacterial sugar transferase Theam_0991 a41fa146f9b76fe66879cef64b26e239 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 6.6E-17 T 13-10-2018 IPR003004 GspF/PilC family Theam_0991 a41fa146f9b76fe66879cef64b26e239 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 6.6E-17 T 13-10-2018 IPR003004 GspF/PilC family Theam_0991 a41fa146f9b76fe66879cef64b26e239 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 6.6E-17 T 13-10-2018 IPR003004 GspF/PilC family Theam_0991 a41fa146f9b76fe66879cef64b26e239 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 6.6E-17 T 13-10-2018 IPR003004 GspF/PilC family Theam_0991 a41fa146f9b76fe66879cef64b26e239 404 Gene3D G3DSA:1.20.81.30 256 366 1.3E-35 T 13-10-2018 Theam_0991 a41fa146f9b76fe66879cef64b26e239 404 Gene3D G3DSA:1.20.81.30 54 172 1.8E-33 T 13-10-2018 Theam_0991 a41fa146f9b76fe66879cef64b26e239 404 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 2.5E-34 T 13-10-2018 IPR018076 Type II secretion system F domain Theam_0991 a41fa146f9b76fe66879cef64b26e239 404 Pfam PF00482 Type II secretion system (T2SS), protein F 70 193 5.8E-32 T 13-10-2018 IPR018076 Type II secretion system F domain Theam_0878 64fea208d76391e1f8b5ee0bc371f6bc 118 SUPERFAMILY SSF54690 12 112 5.89E-14 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Theam_0878 64fea208d76391e1f8b5ee0bc371f6bc 118 Pfam PF02391 MoaE protein 10 111 1.1E-12 T 13-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Theam_0878 64fea208d76391e1f8b5ee0bc371f6bc 118 Gene3D G3DSA:3.90.1170.40 3 117 3.8E-13 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Theam_0915 6a3ec0c37be137a5949a7d4d435820af 177 Pfam PF02620 Uncharacterized ACR, COG1399 55 169 3.4E-23 T 13-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Theam_0486 48a608f60d7edf86fdf85d778e2a36b8 292 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 153 162 9.9E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Theam_0486 48a608f60d7edf86fdf85d778e2a36b8 292 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 127 146 9.9E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Theam_0486 48a608f60d7edf86fdf85d778e2a36b8 292 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 221 229 9.9E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Theam_0486 48a608f60d7edf86fdf85d778e2a36b8 292 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 165 176 9.9E-8 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Theam_0486 48a608f60d7edf86fdf85d778e2a36b8 292 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 253 283 7.5E-9 T 13-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Theam_0486 48a608f60d7edf86fdf85d778e2a36b8 292 SUPERFAMILY SSF63380 18 116 1.36E-23 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Theam_0486 48a608f60d7edf86fdf85d778e2a36b8 292 Pfam PF00970 Oxidoreductase FAD-binding domain 23 114 1.2E-9 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Theam_0486 48a608f60d7edf86fdf85d778e2a36b8 292 Pfam PF00175 Oxidoreductase NAD-binding domain 129 228 1.2E-14 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Theam_0486 48a608f60d7edf86fdf85d778e2a36b8 292 PIRSF PIRSF006816 17 292 2.8E-73 T 13-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 Theam_0486 48a608f60d7edf86fdf85d778e2a36b8 292 Gene3D G3DSA:2.40.30.10 19 115 1.2E-18 T 13-10-2018 Theam_0486 48a608f60d7edf86fdf85d778e2a36b8 292 Gene3D G3DSA:3.40.50.80 116 252 4.2E-23 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Theam_0486 48a608f60d7edf86fdf85d778e2a36b8 292 PRINTS PR00410 Phenol hydroxylase reductase family signature 127 146 2.6E-7 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Theam_0486 48a608f60d7edf86fdf85d778e2a36b8 292 PRINTS PR00410 Phenol hydroxylase reductase family signature 221 229 2.6E-7 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Theam_0486 48a608f60d7edf86fdf85d778e2a36b8 292 PRINTS PR00410 Phenol hydroxylase reductase family signature 53 65 2.6E-7 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Theam_0486 48a608f60d7edf86fdf85d778e2a36b8 292 SUPERFAMILY SSF52343 111 283 1.03E-29 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Theam_1394 5fe19f7980cf31552d0035ef8cded25d 98 Gene3D G3DSA:3.30.70.20 14 97 2.2E-14 T 13-10-2018 Theam_1394 5fe19f7980cf31552d0035ef8cded25d 98 Pfam PF14697 4Fe-4S dicluster domain 36 88 2.4E-10 T 13-10-2018 Theam_1394 5fe19f7980cf31552d0035ef8cded25d 98 TIGRFAM TIGR02179 PorD_KorD: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 17 91 6.5E-34 T 13-10-2018 IPR011898 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0051539 Theam_1394 5fe19f7980cf31552d0035ef8cded25d 98 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 71 82 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_1394 5fe19f7980cf31552d0035ef8cded25d 98 SUPERFAMILY SSF54862 26 92 1.71E-21 T 13-10-2018 Theam_0452 41887d3d8ab5bdb594aa837c5f64c276 220 TIGRFAM TIGR01508 rib_reduct_arch: diaminohydroxyphosphoribosylaminopyrimidine reductase 4 217 3.4E-58 T 13-10-2018 IPR006401 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1-reductase, archaeal GO:0016491|GO:0055114 KEGG: 00740+1.1.1.302|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Theam_0452 41887d3d8ab5bdb594aa837c5f64c276 220 Gene3D G3DSA:3.40.430.10 1 219 1.9E-63 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Theam_0452 41887d3d8ab5bdb594aa837c5f64c276 220 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 3 216 1.2E-56 T 13-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 Theam_0452 41887d3d8ab5bdb594aa837c5f64c276 220 SUPERFAMILY SSF53597 2 215 4.35E-55 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Theam_0452 41887d3d8ab5bdb594aa837c5f64c276 220 Pfam PF01872 RibD C-terminal domain 4 214 2.3E-55 T 13-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Theam_0957 e6d0b2eea7b31692b169d5ba33e7ea88 171 SUPERFAMILY SSF46785 3 76 1.18E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0957 e6d0b2eea7b31692b169d5ba33e7ea88 171 Gene3D G3DSA:1.10.10.10 78 170 2.2E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0957 e6d0b2eea7b31692b169d5ba33e7ea88 171 Gene3D G3DSA:1.10.10.10 1 77 5.4E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0957 e6d0b2eea7b31692b169d5ba33e7ea88 171 PIRSF PIRSF019345 1 170 1.1E-56 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Theam_0957 e6d0b2eea7b31692b169d5ba33e7ea88 171 SUPERFAMILY SSF46785 78 153 1.48E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0957 e6d0b2eea7b31692b169d5ba33e7ea88 171 Pfam PF04079 Segregation and condensation complex subunit ScpB 7 162 2.2E-55 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Theam_0957 e6d0b2eea7b31692b169d5ba33e7ea88 171 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 5 167 9.6E-35 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Theam_1187 cc54568aacbcb0df9c0a9b87b94ce08d 193 Gene3D G3DSA:3.30.390.80 7 139 3.7E-8 T 13-10-2018 Theam_1187 cc54568aacbcb0df9c0a9b87b94ce08d 193 Pfam PF04098 Rad52/22 family double-strand break repair protein 35 132 5.8E-5 T 13-10-2018 IPR007232 DNA repair protein Rad52/59/22 GO:0006281|GO:0006310 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938 Theam_1746 b36269d0be56f802e6902fdb0f8f8143 192 SMART SM00052 2 179 0.005 T 13-10-2018 IPR001633 EAL domain Theam_1746 b36269d0be56f802e6902fdb0f8f8143 192 SUPERFAMILY SSF141868 5 182 2.75E-17 T 13-10-2018 IPR035919 EAL domain superfamily Theam_1746 b36269d0be56f802e6902fdb0f8f8143 192 Pfam PF00563 EAL domain 52 137 6.6E-10 T 13-10-2018 IPR001633 EAL domain Theam_1746 b36269d0be56f802e6902fdb0f8f8143 192 Gene3D G3DSA:3.20.20.450 2 147 2.2E-11 T 13-10-2018 IPR035919 EAL domain superfamily Theam_0336 f0c7b60fa35aac5b9a3594a2c1baeb76 176 Gene3D G3DSA:3.60.20.10 1 176 5.3E-66 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Theam_0336 f0c7b60fa35aac5b9a3594a2c1baeb76 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 5 176 41.194 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Theam_0336 f0c7b60fa35aac5b9a3594a2c1baeb76 176 PIRSF PIRSF039093 1 176 3.9E-85 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Theam_0336 f0c7b60fa35aac5b9a3594a2c1baeb76 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 6 176 2.8E-83 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Theam_0336 f0c7b60fa35aac5b9a3594a2c1baeb76 176 SUPERFAMILY SSF56235 2 175 7.53E-60 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Theam_0336 f0c7b60fa35aac5b9a3594a2c1baeb76 176 Pfam PF00227 Proteasome subunit 4 174 6.4E-26 T 13-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Theam_1275 e8e31b992a372a2e83978523f9ed274f 287 Pfam PF02754 Cysteine-rich domain 5 87 1.9E-16 T 13-10-2018 IPR004017 Cysteine-rich domain Theam_1275 e8e31b992a372a2e83978523f9ed274f 287 Pfam PF02754 Cysteine-rich domain 152 239 4.4E-13 T 13-10-2018 IPR004017 Cysteine-rich domain Theam_0285 fa6805afa92a1903aca9d9aeaf1607cd 316 Gene3D G3DSA:1.10.150.20 246 312 3.6E-18 T 13-10-2018 Theam_0285 fa6805afa92a1903aca9d9aeaf1607cd 316 Gene3D G3DSA:2.170.120.12 49 172 3.9E-82 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_0285 fa6805afa92a1903aca9d9aeaf1607cd 316 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 19 313 2.8E-96 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_0285 fa6805afa92a1903aca9d9aeaf1607cd 316 SUPERFAMILY SSF56553 49 173 1.74E-35 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_0285 fa6805afa92a1903aca9d9aeaf1607cd 316 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 25 223 3.4E-24 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_0285 fa6805afa92a1903aca9d9aeaf1607cd 316 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 243 306 8.4E-14 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_0285 fa6805afa92a1903aca9d9aeaf1607cd 316 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 315 32.776 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_0285 fa6805afa92a1903aca9d9aeaf1607cd 316 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 58 151 5.4E-16 T 13-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_0285 fa6805afa92a1903aca9d9aeaf1607cd 316 SMART SM00662 19 229 8.4E-79 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_0285 fa6805afa92a1903aca9d9aeaf1607cd 316 SUPERFAMILY SSF55257 4 228 2.2E-32 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_0285 fa6805afa92a1903aca9d9aeaf1607cd 316 Gene3D G3DSA:3.30.1360.10 13 222 3.9E-82 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Theam_0285 fa6805afa92a1903aca9d9aeaf1607cd 316 SUPERFAMILY SSF47789 249 313 6.67E-14 T 13-10-2018 Theam_1359 08bd3cec0745b3f190849c30a4d41bab 202 SUPERFAMILY SSF64307 2 68 1.96E-15 T 13-10-2018 IPR036868 TusA-like domain superfamily Theam_1359 08bd3cec0745b3f190849c30a4d41bab 202 Gene3D G3DSA:3.30.110.40 1 84 1.5E-22 T 13-10-2018 IPR036868 TusA-like domain superfamily Theam_1359 08bd3cec0745b3f190849c30a4d41bab 202 Pfam PF01206 Sulfurtransferase TusA 3 68 3.1E-18 T 13-10-2018 IPR001455 TusA-like domain Theam_1359 08bd3cec0745b3f190849c30a4d41bab 202 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 4 202 3.1E-59 T 13-10-2018 IPR019870 Selenium metabolism protein YedF Theam_1359 08bd3cec0745b3f190849c30a4d41bab 202 Pfam PF02635 DsrE/DsrF-like family 130 199 1.7E-6 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Theam_1359 08bd3cec0745b3f190849c30a4d41bab 202 SUPERFAMILY SSF75169 110 193 1.86E-9 T 13-10-2018 IPR027396 DsrEFH-like Theam_1335 28aa37b819af49a4ccdcb60f33ec1061 216 SUPERFAMILY SSF51206 4 143 6.94E-39 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Theam_1335 28aa37b819af49a4ccdcb60f33ec1061 216 Pfam PF00027 Cyclic nucleotide-binding domain 30 116 4.2E-21 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Theam_1335 28aa37b819af49a4ccdcb60f33ec1061 216 SMART SM00100 11 128 5.1E-24 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Theam_1335 28aa37b819af49a4ccdcb60f33ec1061 216 Pfam PF13545 Crp-like helix-turn-helix domain 149 214 3.8E-10 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Theam_1335 28aa37b819af49a4ccdcb60f33ec1061 216 SUPERFAMILY SSF46785 146 215 1.18E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_1335 28aa37b819af49a4ccdcb60f33ec1061 216 Gene3D G3DSA:1.10.10.10 143 214 5.3E-10 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_1335 28aa37b819af49a4ccdcb60f33ec1061 216 Gene3D G3DSA:2.60.120.10 1 142 1.9E-44 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Theam_0307 11de031fa690f09ce50311cd3ea4b987 104 Pfam PF01022 Bacterial regulatory protein, arsR family 27 73 3.1E-16 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_0307 11de031fa690f09ce50311cd3ea4b987 104 SUPERFAMILY SSF46785 9 102 4.65E-27 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0307 11de031fa690f09ce50311cd3ea4b987 104 SMART SM00418 20 101 7.7E-26 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_0307 11de031fa690f09ce50311cd3ea4b987 104 Gene3D G3DSA:1.10.10.10 2 100 1.5E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0307 11de031fa690f09ce50311cd3ea4b987 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 6.6E-16 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_0307 11de031fa690f09ce50311cd3ea4b987 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 6.6E-16 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_0307 11de031fa690f09ce50311cd3ea4b987 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 6.6E-16 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_0307 11de031fa690f09ce50311cd3ea4b987 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 52 6.6E-16 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_0264 8422850f3e7631d7c4562091489226a1 142 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 7.5E-51 T 13-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Theam_0264 8422850f3e7631d7c4562091489226a1 142 SUPERFAMILY SSF54686 1 136 1.09E-58 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Theam_0264 8422850f3e7631d7c4562091489226a1 142 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 39.796 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0264 8422850f3e7631d7c4562091489226a1 142 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 5.7E-61 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0264 8422850f3e7631d7c4562091489226a1 142 Gene3D G3DSA:3.90.1170.10 1 142 2.0E-57 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Theam_0264 8422850f3e7631d7c4562091489226a1 142 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0264 8422850f3e7631d7c4562091489226a1 142 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0264 8422850f3e7631d7c4562091489226a1 142 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.3E-36 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0264 8422850f3e7631d7c4562091489226a1 142 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.3E-36 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0264 8422850f3e7631d7c4562091489226a1 142 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.3E-36 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0264 8422850f3e7631d7c4562091489226a1 142 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.3E-36 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1605 d1e77685f924f91f28466f04e953b56e 232 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 24 221 7.6E-36 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1605 d1e77685f924f91f28466f04e953b56e 232 ProSitePatterns PS00449 ATP synthase a subunit signature. 164 173 - T 13-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1605 d1e77685f924f91f28466f04e953b56e 232 Gene3D G3DSA:1.20.120.220 71 225 3.8E-43 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1605 d1e77685f924f91f28466f04e953b56e 232 Pfam PF00119 ATP synthase A chain 22 218 2.0E-51 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1605 d1e77685f924f91f28466f04e953b56e 232 SUPERFAMILY SSF81336 70 218 4.58E-34 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1605 d1e77685f924f91f28466f04e953b56e 232 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 225 15.659 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1605 d1e77685f924f91f28466f04e953b56e 232 PRINTS PR00123 ATP synthase A subunit signature 79 95 1.0E-14 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1605 d1e77685f924f91f28466f04e953b56e 232 PRINTS PR00123 ATP synthase A subunit signature 205 220 1.0E-14 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1605 d1e77685f924f91f28466f04e953b56e 232 PRINTS PR00123 ATP synthase A subunit signature 141 156 1.0E-14 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1605 d1e77685f924f91f28466f04e953b56e 232 PRINTS PR00123 ATP synthase A subunit signature 161 183 1.0E-14 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1379 14eab6cc2c91e4ba8955654571df2d8b 267 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 15 266 5.5E-90 T 13-10-2018 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate Theam_1379 14eab6cc2c91e4ba8955654571df2d8b 267 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 51 198 9.0E-25 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Theam_1379 14eab6cc2c91e4ba8955654571df2d8b 267 Gene3D G3DSA:3.40.50.970 68 214 6.9E-22 T 13-10-2018 Theam_1379 14eab6cc2c91e4ba8955654571df2d8b 267 Pfam PF12367 Pyruvate ferredoxin oxidoreductase beta subunit C terminal 202 267 5.1E-20 T 13-10-2018 IPR032686 Pyruvate ferredoxin oxidoreductase beta subunit, C-terminal Theam_1379 14eab6cc2c91e4ba8955654571df2d8b 267 SUPERFAMILY SSF52518 12 265 2.64E-69 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Theam_1580 842fa3dd2e0842025bbeaf5b4f7e96b7 128 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 63 106 3.0E-14 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1580 842fa3dd2e0842025bbeaf5b4f7e96b7 128 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 128 2.4E-51 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1580 842fa3dd2e0842025bbeaf5b4f7e96b7 128 Gene3D G3DSA:3.30.1390.10 58 128 4.1E-34 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Theam_1580 842fa3dd2e0842025bbeaf5b4f7e96b7 128 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 128 25.912 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1580 842fa3dd2e0842025bbeaf5b4f7e96b7 128 Gene3D G3DSA:1.20.5.710 4 57 1.4E-19 T 13-10-2018 Theam_1580 842fa3dd2e0842025bbeaf5b4f7e96b7 128 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 52 4.1E-19 T 13-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1580 842fa3dd2e0842025bbeaf5b4f7e96b7 128 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 62 128 9.0E-34 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1580 842fa3dd2e0842025bbeaf5b4f7e96b7 128 SUPERFAMILY SSF48300 4 64 5.23E-17 T 13-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1580 842fa3dd2e0842025bbeaf5b4f7e96b7 128 SUPERFAMILY SSF54736 57 128 3.14E-27 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Theam_0097 dd6a9906473f4fbe878bd1960c9f4175 105 Pfam PF03091 CutA1 divalent ion tolerance protein 7 102 1.2E-34 T 13-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 Theam_0097 dd6a9906473f4fbe878bd1960c9f4175 105 Gene3D G3DSA:3.30.70.120 1 105 2.9E-38 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Theam_0097 dd6a9906473f4fbe878bd1960c9f4175 105 SUPERFAMILY SSF54913 2 104 4.45E-36 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Theam_0639 48c04d9454a2c6be9f78cb70e0191a19 309 SUPERFAMILY SSF52402 29 235 5.95E-42 T 13-10-2018 Theam_0639 48c04d9454a2c6be9f78cb70e0191a19 309 PIRSF PIRSF004976 2 309 1.4E-85 T 13-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 Theam_0639 48c04d9454a2c6be9f78cb70e0191a19 309 Gene3D G3DSA:3.40.50.620 1 309 4.6E-77 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_0639 48c04d9454a2c6be9f78cb70e0191a19 309 ProSitePatterns PS01263 Uncharacterized protein family UPF0021 signature. 27 64 - T 13-10-2018 IPR020554 Uncharacterised protein family UPF0021, conserved site Theam_0639 48c04d9454a2c6be9f78cb70e0191a19 309 Pfam PF01171 PP-loop family 54 225 1.4E-8 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Theam_1396 bda547eb28ab94309b1729cfbdd73fe6 201 Gene3D G3DSA:3.40.1360.10 76 197 2.4E-43 T 13-10-2018 Theam_1396 bda547eb28ab94309b1729cfbdd73fe6 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 76.603 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Theam_1396 bda547eb28ab94309b1729cfbdd73fe6 201 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 13-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 Theam_1396 bda547eb28ab94309b1729cfbdd73fe6 201 SUPERFAMILY SSF111304 2 197 5.36E-61 T 13-10-2018 IPR023627 Recombination protein RecR Theam_1396 bda547eb28ab94309b1729cfbdd73fe6 201 Pfam PF13662 Toprim domain 80 169 1.6E-25 T 13-10-2018 IPR006171 TOPRIM domain Theam_1396 bda547eb28ab94309b1729cfbdd73fe6 201 TIGRFAM TIGR00615 recR: recombination protein RecR 3 194 2.1E-63 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Theam_1396 bda547eb28ab94309b1729cfbdd73fe6 201 SMART SM00493 79 164 6.2E-19 T 13-10-2018 IPR006171 TOPRIM domain Theam_0139 df640a76dd9d58003b82d8ce6e785eaa 662 SMART SM00052 412 653 3.1E-34 T 13-10-2018 IPR001633 EAL domain Theam_0139 df640a76dd9d58003b82d8ce6e785eaa 662 Gene3D G3DSA:3.30.70.270 250 404 1.2E-8 T 13-10-2018 Theam_0139 df640a76dd9d58003b82d8ce6e785eaa 662 SUPERFAMILY SSF55073 266 398 8.63E-5 T 13-10-2018 IPR029787 Nucleotide cyclase Theam_0139 df640a76dd9d58003b82d8ce6e785eaa 662 SUPERFAMILY SSF141868 420 658 3.4E-49 T 13-10-2018 IPR035919 EAL domain superfamily Theam_0139 df640a76dd9d58003b82d8ce6e785eaa 662 Gene3D G3DSA:3.20.20.450 414 657 3.7E-51 T 13-10-2018 IPR035919 EAL domain superfamily Theam_0139 df640a76dd9d58003b82d8ce6e785eaa 662 Pfam PF00563 EAL domain 422 648 2.6E-41 T 13-10-2018 IPR001633 EAL domain Theam_1657 7ab420bf764aafe9a11abfc9fc40db35 157 SUPERFAMILY SSF81573 67 122 1.83E-6 T 13-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Theam_1657 7ab420bf764aafe9a11abfc9fc40db35 157 Pfam PF00430 ATP synthase B/B' CF(0) 8 137 1.1E-22 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Theam_1657 7ab420bf764aafe9a11abfc9fc40db35 157 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 139 12.112 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Theam_0985 fa60f7e4cb3305d318af2f8a2834e026 568 PRINTS PR01183 Ribonucleotide reductase large chain signature 260 271 7.7E-36 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_0985 fa60f7e4cb3305d318af2f8a2834e026 568 PRINTS PR01183 Ribonucleotide reductase large chain signature 359 382 7.7E-36 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_0985 fa60f7e4cb3305d318af2f8a2834e026 568 PRINTS PR01183 Ribonucleotide reductase large chain signature 156 175 7.7E-36 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_0985 fa60f7e4cb3305d318af2f8a2834e026 568 PRINTS PR01183 Ribonucleotide reductase large chain signature 331 353 7.7E-36 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_0985 fa60f7e4cb3305d318af2f8a2834e026 568 PRINTS PR01183 Ribonucleotide reductase large chain signature 397 424 7.7E-36 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_0985 fa60f7e4cb3305d318af2f8a2834e026 568 PRINTS PR01183 Ribonucleotide reductase large chain signature 293 316 7.7E-36 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_0985 fa60f7e4cb3305d318af2f8a2834e026 568 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 3 78 1.2E-21 T 13-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_0985 fa60f7e4cb3305d318af2f8a2834e026 568 SUPERFAMILY SSF51998 80 547 6.1E-151 T 13-10-2018 Theam_0985 fa60f7e4cb3305d318af2f8a2834e026 568 Pfam PF02867 Ribonucleotide reductase, barrel domain 81 395 3.2E-114 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_0985 fa60f7e4cb3305d318af2f8a2834e026 568 Gene3D G3DSA:3.20.70.20 1 553 1.4E-224 T 13-10-2018 Theam_0985 fa60f7e4cb3305d318af2f8a2834e026 568 Pfam PF02867 Ribonucleotide reductase, barrel domain 397 541 8.8E-40 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_0985 fa60f7e4cb3305d318af2f8a2834e026 568 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 10 550 6.5E-202 T 13-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Theam_0985 fa60f7e4cb3305d318af2f8a2834e026 568 SUPERFAMILY SSF48168 8 79 6.28E-9 T 13-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_1130 118837462a6b202c9ffd7eae9721da73 452 Pfam PF02321 Outer membrane efflux protein 24 206 8.6E-22 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Theam_1130 118837462a6b202c9ffd7eae9721da73 452 Pfam PF02321 Outer membrane efflux protein 228 408 2.7E-24 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Theam_1130 118837462a6b202c9ffd7eae9721da73 452 Gene3D G3DSA:1.20.1600.10 15 413 2.6E-69 T 13-10-2018 Theam_1130 118837462a6b202c9ffd7eae9721da73 452 SUPERFAMILY SSF56954 3 411 9.68E-67 T 13-10-2018 Theam_1212 a89ae17c28700bfb2f2e0539996ef6fe 185 Pfam PF01625 Peptide methionine sulfoxide reductase 6 155 1.7E-61 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Theam_1212 a89ae17c28700bfb2f2e0539996ef6fe 185 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 4 155 2.0E-58 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Theam_1212 a89ae17c28700bfb2f2e0539996ef6fe 185 SUPERFAMILY SSF55068 3 165 5.36E-69 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Theam_1212 a89ae17c28700bfb2f2e0539996ef6fe 185 Gene3D G3DSA:3.30.1060.10 1 164 1.4E-65 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Theam_1212 a89ae17c28700bfb2f2e0539996ef6fe 185 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 162 36.65 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Theam_1617 0f65a90189ca680b820a4086a03a3c16 338 TIGRFAM TIGR01875 cas_MJ0381: CRISPR-associated autoregulator DevR family 8 254 7.7E-47 T 13-10-2018 IPR010154 CRISPR-associated protein Cas7/Cst2/DevR Theam_1617 0f65a90189ca680b820a4086a03a3c16 338 Pfam PF01905 CRISPR-associated negative auto-regulator DevR/Csa2 7 244 5.1E-31 T 13-10-2018 IPR010154 CRISPR-associated protein Cas7/Cst2/DevR Theam_1617 0f65a90189ca680b820a4086a03a3c16 338 TIGRFAM TIGR02585 cas_Cst2_DevR: CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP 9 333 9.6E-64 T 13-10-2018 IPR013414 CRISPR-associated protein Cas7, subtype I-B/Tneap Theam_0301 15c50f22073640a54be5d806977341f6 80 Gene3D G3DSA:4.10.640.10 3 80 6.4E-33 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0301 15c50f22073640a54be5d806977341f6 80 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 27 78 5.0E-16 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0301 15c50f22073640a54be5d806977341f6 80 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 8 79 23.529 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0301 15c50f22073640a54be5d806977341f6 80 PRINTS PR00974 Ribosomal protein S18 family signature 52 66 4.0E-19 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0301 15c50f22073640a54be5d806977341f6 80 PRINTS PR00974 Ribosomal protein S18 family signature 66 76 4.0E-19 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0301 15c50f22073640a54be5d806977341f6 80 PRINTS PR00974 Ribosomal protein S18 family signature 44 51 4.0E-19 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0301 15c50f22073640a54be5d806977341f6 80 PRINTS PR00974 Ribosomal protein S18 family signature 34 44 4.0E-19 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0301 15c50f22073640a54be5d806977341f6 80 TIGRFAM TIGR00165 S18: ribosomal protein bS18 11 78 3.2E-35 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0301 15c50f22073640a54be5d806977341f6 80 Pfam PF01084 Ribosomal protein S18 23 74 1.5E-28 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0301 15c50f22073640a54be5d806977341f6 80 ProSitePatterns PS00057 Ribosomal protein S18 signature. 27 50 - T 13-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0301 15c50f22073640a54be5d806977341f6 80 SUPERFAMILY SSF46911 6 77 3.79E-31 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0314 da4427f13418546f4e3b0e7510ba0c89 358 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 46 354 6.8E-108 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Theam_0314 da4427f13418546f4e3b0e7510ba0c89 358 SUPERFAMILY SSF53850 45 355 2.57E-94 T 13-10-2018 Theam_0314 da4427f13418546f4e3b0e7510ba0c89 358 Pfam PF12849 PBP superfamily domain 39 324 8.3E-57 T 13-10-2018 IPR024370 PBP domain Theam_0314 da4427f13418546f4e3b0e7510ba0c89 358 PIRSF PIRSF002756 4 358 1.1E-109 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Theam_0314 da4427f13418546f4e3b0e7510ba0c89 358 Gene3D G3DSA:3.40.190.10 120 298 1.2E-113 T 13-10-2018 Theam_0314 da4427f13418546f4e3b0e7510ba0c89 358 Gene3D G3DSA:3.40.190.10 47 343 1.2E-113 T 13-10-2018 Theam_0471 15c5a1e009620f55cb806209e52c0a26 122 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 9 118 18.661 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Theam_0471 15c5a1e009620f55cb806209e52c0a26 122 SUPERFAMILY SSF54211 8 120 5.82E-30 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_0471 15c5a1e009620f55cb806209e52c0a26 122 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 11 116 1.6E-26 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Theam_0471 15c5a1e009620f55cb806209e52c0a26 122 Gene3D G3DSA:3.30.230.10 7 122 1.3E-33 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Theam_0471 15c5a1e009620f55cb806209e52c0a26 122 Pfam PF00825 Ribonuclease P 9 115 8.0E-30 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Theam_0471 15c5a1e009620f55cb806209e52c0a26 122 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 20 96 5.0E-13 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Theam_0471 15c5a1e009620f55cb806209e52c0a26 122 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 59 73 - T 13-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 Theam_0980 c6ca013ec14d6a3705ec6fc665d568ff 474 Gene3D G3DSA:3.40.50.2000 248 452 4.5E-169 T 13-10-2018 Theam_0980 c6ca013ec14d6a3705ec6fc665d568ff 474 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 468 8.2E-166 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Theam_0980 c6ca013ec14d6a3705ec6fc665d568ff 474 SUPERFAMILY SSF53756 3 470 1.22E-111 T 13-10-2018 Theam_0980 c6ca013ec14d6a3705ec6fc665d568ff 474 Pfam PF00534 Glycosyl transferases group 1 285 440 2.8E-19 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Theam_0980 c6ca013ec14d6a3705ec6fc665d568ff 474 Hamap MF_00484 Glycogen synthase [glgA]. 1 468 40.95 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Theam_0980 c6ca013ec14d6a3705ec6fc665d568ff 474 Gene3D G3DSA:3.40.50.2000 3 466 4.5E-169 T 13-10-2018 Theam_0980 c6ca013ec14d6a3705ec6fc665d568ff 474 Pfam PF08323 Starch synthase catalytic domain 2 235 3.7E-77 T 13-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Theam_1101 b6e74e321288d1e606e9f4ee1957e26c 334 SMART SM00387 214 325 1.3E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_1101 b6e74e321288d1e606e9f4ee1957e26c 334 Gene3D G3DSA:1.10.287.130 113 172 6.0E-11 T 13-10-2018 Theam_1101 b6e74e321288d1e606e9f4ee1957e26c 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 256 270 3.2E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1101 b6e74e321288d1e606e9f4ee1957e26c 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 303 3.2E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1101 b6e74e321288d1e606e9f4ee1957e26c 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 322 3.2E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Theam_1101 b6e74e321288d1e606e9f4ee1957e26c 334 Gene3D G3DSA:3.30.450.20 4 102 3.1E-6 T 13-10-2018 Theam_1101 b6e74e321288d1e606e9f4ee1957e26c 334 Gene3D G3DSA:3.30.565.10 174 331 1.5E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_1101 b6e74e321288d1e606e9f4ee1957e26c 334 Pfam PF00512 His Kinase A (phospho-acceptor) domain 113 170 4.2E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Theam_1101 b6e74e321288d1e606e9f4ee1957e26c 334 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 215 323 1.9E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_1101 b6e74e321288d1e606e9f4ee1957e26c 334 SUPERFAMILY SSF55874 167 325 6.16E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_1101 b6e74e321288d1e606e9f4ee1957e26c 334 SUPERFAMILY SSF47384 113 164 4.51E-9 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Theam_1101 b6e74e321288d1e606e9f4ee1957e26c 334 SMART SM00388 109 175 3.5E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Theam_1596 4fb1cc9f5b573402230dc9b6d0f857ef 358 Pfam PF01842 ACT domain 277 340 1.1E-8 T 13-10-2018 IPR002912 ACT domain Theam_1596 4fb1cc9f5b573402230dc9b6d0f857ef 358 Gene3D G3DSA:3.40.190.10 91 261 1.2E-58 T 13-10-2018 Theam_1596 4fb1cc9f5b573402230dc9b6d0f857ef 358 Gene3D G3DSA:1.20.59.10 1 88 4.9E-34 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Theam_1596 4fb1cc9f5b573402230dc9b6d0f857ef 358 Pfam PF01817 Chorismate mutase type II 8 85 3.8E-28 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Theam_1596 4fb1cc9f5b573402230dc9b6d0f857ef 358 SUPERFAMILY SSF48600 3 89 3.66E-25 T 13-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Theam_1596 4fb1cc9f5b573402230dc9b6d0f857ef 358 TIGRFAM TIGR01807 CM_P2: chorismate mutase 4 77 3.0E-25 T 13-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 Theam_1596 4fb1cc9f5b573402230dc9b6d0f857ef 358 SUPERFAMILY SSF53850 88 268 7.82E-59 T 13-10-2018 Theam_1596 4fb1cc9f5b573402230dc9b6d0f857ef 358 SUPERFAMILY SSF55021 258 354 1.83E-30 T 13-10-2018 Theam_1596 4fb1cc9f5b573402230dc9b6d0f857ef 358 Gene3D G3DSA:3.30.70.260 268 355 8.3E-36 T 13-10-2018 Theam_1596 4fb1cc9f5b573402230dc9b6d0f857ef 358 SMART SM00830 8 87 4.0E-36 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Theam_1596 4fb1cc9f5b573402230dc9b6d0f857ef 358 Pfam PF00800 Prephenate dehydratase 89 264 5.1E-63 T 13-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Theam_1596 4fb1cc9f5b573402230dc9b6d0f857ef 358 PIRSF PIRSF001500 1 355 2.8E-134 T 13-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Theam_1596 4fb1cc9f5b573402230dc9b6d0f857ef 358 TIGRFAM TIGR01808 CM_M_hiGC-arch: chorismate mutase 4 60 2.6E-15 T 13-10-2018 IPR010958 Chorismate mutase, high GC Gram-positive bacteria/archaeal Theam_1596 4fb1cc9f5b573402230dc9b6d0f857ef 358 Gene3D G3DSA:3.40.190.10 169 253 1.2E-58 T 13-10-2018 Theam_1596 4fb1cc9f5b573402230dc9b6d0f857ef 358 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 302 309 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Theam_0658 7d9cf310f3d7e4f3f9f19ac2cce63cb6 166 SUPERFAMILY SSF47240 12 158 1.53E-36 T 13-10-2018 IPR009078 Ferritin-like superfamily Theam_0658 7d9cf310f3d7e4f3f9f19ac2cce63cb6 166 PIRSF PIRSF018063 1 164 2.1E-59 T 13-10-2018 IPR014490 DNA-binding protein from starved cells-like Theam_0658 7d9cf310f3d7e4f3f9f19ac2cce63cb6 166 Gene3D G3DSA:1.20.1260.10 4 165 2.9E-56 T 13-10-2018 IPR012347 Ferritin-like Theam_0658 7d9cf310f3d7e4f3f9f19ac2cce63cb6 166 Pfam PF00210 Ferritin-like domain 18 160 6.8E-35 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Theam_0767 ac13ca4972e106fe3f171c2a4defb9d6 502 Pfam PF00209 Sodium:neurotransmitter symporter family 6 130 2.8E-25 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Theam_0767 ac13ca4972e106fe3f171c2a4defb9d6 502 Pfam PF00209 Sodium:neurotransmitter symporter family 165 490 1.6E-36 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Theam_0767 ac13ca4972e106fe3f171c2a4defb9d6 502 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 399 419 3.1E-12 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Theam_0767 ac13ca4972e106fe3f171c2a4defb9d6 502 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 439 459 3.1E-12 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Theam_0767 ac13ca4972e106fe3f171c2a4defb9d6 502 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 14 35 3.1E-12 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Theam_0767 ac13ca4972e106fe3f171c2a4defb9d6 502 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 43 62 3.1E-12 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Theam_0767 ac13ca4972e106fe3f171c2a4defb9d6 502 SUPERFAMILY SSF161070 6 491 4.45E-125 T 13-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 Theam_0183 548ce7fbad64ed641582d0faa456e119 345 Pfam PF11563 Protoglobin 11 194 2.3E-23 T 13-10-2018 Theam_0183 548ce7fbad64ed641582d0faa456e119 345 SUPERFAMILY SSF46458 6 132 7.05E-21 T 13-10-2018 IPR009050 Globin-like superfamily Theam_0183 548ce7fbad64ed641582d0faa456e119 345 Pfam PF06146 Phosphate-starvation-inducible E 259 326 4.8E-8 T 13-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like Theam_0688 53dd6d21bea402e3bf960451be66a875 235 Gene3D G3DSA:1.20.58.220 111 222 2.0E-38 T 13-10-2018 IPR038078 PhoU-like domain superfamily Theam_0688 53dd6d21bea402e3bf960451be66a875 235 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 212 7.7E-61 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Theam_0688 53dd6d21bea402e3bf960451be66a875 235 Pfam PF01895 PhoU domain 17 103 1.8E-18 T 13-10-2018 IPR026022 PhoU domain Theam_0688 53dd6d21bea402e3bf960451be66a875 235 Pfam PF01895 PhoU domain 119 203 4.5E-23 T 13-10-2018 IPR026022 PhoU domain Theam_0688 53dd6d21bea402e3bf960451be66a875 235 PIRSF PIRSF003107 1 218 3.1E-63 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Theam_0688 53dd6d21bea402e3bf960451be66a875 235 Gene3D G3DSA:1.20.58.220 2 110 5.4E-34 T 13-10-2018 IPR038078 PhoU-like domain superfamily Theam_0688 53dd6d21bea402e3bf960451be66a875 235 SUPERFAMILY SSF109755 5 221 1.47E-66 T 13-10-2018 Theam_0926 1f9311ceee8628c04a26d26df5ba9022 677 SUPERFAMILY SSF52540 26 283 8.58E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0926 1f9311ceee8628c04a26d26df5ba9022 677 Pfam PF00350 Dynamin family 44 231 7.2E-23 T 13-10-2018 IPR022812 Dynamin superfamily Theam_1154 776ba17568f3e621059f3bf7c54d275c 157 Gene3D G3DSA:3.40.50.1000 1 156 4.4E-45 T 13-10-2018 IPR023214 HAD superfamily Theam_1154 776ba17568f3e621059f3bf7c54d275c 157 SUPERFAMILY SSF56784 1 150 2.2E-35 T 13-10-2018 IPR036412 HAD-like superfamily Theam_1154 776ba17568f3e621059f3bf7c54d275c 157 PIRSF PIRSF006118 1 157 9.3E-60 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Theam_1154 776ba17568f3e621059f3bf7c54d275c 157 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 2 151 1.3E-51 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Theam_1154 776ba17568f3e621059f3bf7c54d275c 157 Pfam PF08282 haloacid dehalogenase-like hydrolase 71 137 7.3E-8 T 13-10-2018 Theam_0073 80599dcf7786c4a08200012f5e541478 284 Gene3D G3DSA:3.40.50.1580 1 281 1.6E-102 T 13-10-2018 Theam_0073 80599dcf7786c4a08200012f5e541478 284 Pfam PF01048 Phosphorylase superfamily 2 240 2.0E-45 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Theam_0073 80599dcf7786c4a08200012f5e541478 284 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 2 241 2.7E-93 T 13-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 Theam_0073 80599dcf7786c4a08200012f5e541478 284 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 1 266 41.403 T 13-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 Theam_0073 80599dcf7786c4a08200012f5e541478 284 SUPERFAMILY SSF53167 1 250 3.89E-92 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Theam_0111 718833f90ba63b9eb0fe7a0fb077caba 340 Gene3D G3DSA:3.30.160.60 304 338 1.0E-8 T 13-10-2018 Theam_0111 718833f90ba63b9eb0fe7a0fb077caba 340 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 2 330 2.3E-56 T 13-10-2018 IPR003770 Endolytic murein transglycosylase Theam_0111 718833f90ba63b9eb0fe7a0fb077caba 340 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 334 30.174 T 13-10-2018 IPR003770 Endolytic murein transglycosylase Theam_0111 718833f90ba63b9eb0fe7a0fb077caba 340 Pfam PF02618 YceG-like family 40 330 2.2E-67 T 13-10-2018 IPR003770 Endolytic murein transglycosylase Theam_0706 c68849254fc7d9fcf82811e403dd241c 383 Hamap MF_02044 DNA double-strand break repair protein Mre11 [mre11]. 1 368 21.123 T 13-10-2018 IPR032885 DNA double-strand break repair protein Mre11, archaea-type GO:0006302 Theam_0706 c68849254fc7d9fcf82811e403dd241c 383 Gene3D G3DSA:3.60.21.10 1 243 1.5E-44 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Theam_0706 c68849254fc7d9fcf82811e403dd241c 383 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 219 3.4E-12 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Theam_0706 c68849254fc7d9fcf82811e403dd241c 383 SUPERFAMILY SSF56300 2 287 4.29E-45 T 13-10-2018 Theam_1367 6ad36e124af31ba556768d753096d108 443 Gene3D G3DSA:3.40.50.620 1 209 1.8E-67 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1367 6ad36e124af31ba556768d753096d108 443 SUPERFAMILY SSF52402 9 223 8.82E-58 T 13-10-2018 Theam_1367 6ad36e124af31ba556768d753096d108 443 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 13 307 24.21 T 13-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Theam_1367 6ad36e124af31ba556768d753096d108 443 Pfam PF11734 TilS substrate C-terminal domain 365 413 7.8E-9 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Theam_1367 6ad36e124af31ba556768d753096d108 443 SMART SM00977 363 431 2.2E-12 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Theam_1367 6ad36e124af31ba556768d753096d108 443 SUPERFAMILY SSF56037 328 416 6.28E-14 T 13-10-2018 Theam_1367 6ad36e124af31ba556768d753096d108 443 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 202 6.3E-50 T 13-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Theam_1367 6ad36e124af31ba556768d753096d108 443 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 363 406 1.6E-13 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Theam_1367 6ad36e124af31ba556768d753096d108 443 SUPERFAMILY SSF82829 209 308 3.14E-6 T 13-10-2018 Theam_1367 6ad36e124af31ba556768d753096d108 443 Pfam PF01171 PP-loop family 21 198 8.4E-49 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Theam_0540 220e6f0dd7eef80cd279a321c6e80e97 762 Pfam PF00271 Helicase conserved C-terminal domain 244 379 1.1E-10 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_0540 220e6f0dd7eef80cd279a321c6e80e97 762 Gene3D G3DSA:3.40.50.300 25 214 1.3E-40 T 13-10-2018 Theam_0540 220e6f0dd7eef80cd279a321c6e80e97 762 SMART SM00490 285 379 6.6E-10 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_0540 220e6f0dd7eef80cd279a321c6e80e97 762 Gene3D G3DSA:3.40.50.300 218 400 4.2E-25 T 13-10-2018 Theam_0540 220e6f0dd7eef80cd279a321c6e80e97 762 SUPERFAMILY SSF52540 56 391 1.04E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0540 220e6f0dd7eef80cd279a321c6e80e97 762 Pfam PF00270 DEAD/DEAH box helicase 52 198 1.6E-15 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Theam_0540 220e6f0dd7eef80cd279a321c6e80e97 762 SMART SM00487 43 224 5.3E-26 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Theam_1061 2070453ce770375cbf65402ffcb3ac9d 505 SMART SM00729 162 380 1.3E-24 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_1061 2070453ce770375cbf65402ffcb3ac9d 505 SUPERFAMILY SSF102114 164 490 3.66E-33 T 13-10-2018 Theam_1061 2070453ce770375cbf65402ffcb3ac9d 505 Gene3D G3DSA:3.80.30.20 161 343 3.3E-18 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Theam_1061 2070453ce770375cbf65402ffcb3ac9d 505 Pfam PF04055 Radical SAM superfamily 168 324 8.4E-17 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0624 51862797dfec7653ed1d4dc91863aeb0 261 Pfam PF01048 Phosphorylase superfamily 21 254 4.8E-24 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Theam_0624 51862797dfec7653ed1d4dc91863aeb0 261 Gene3D G3DSA:3.40.50.1580 1 259 1.1E-63 T 13-10-2018 Theam_0624 51862797dfec7653ed1d4dc91863aeb0 261 SUPERFAMILY SSF53167 2 258 7.51E-49 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Theam_1497 c334fc0ac223900fc53f45fd923c6dd9 156 SUPERFAMILY SSF56770 4 142 2.35E-51 T 13-10-2018 Theam_1497 c334fc0ac223900fc53f45fd923c6dd9 156 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 4 136 6.8E-45 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1497 c334fc0ac223900fc53f45fd923c6dd9 156 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 20 130 1.3E-19 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1497 c334fc0ac223900fc53f45fd923c6dd9 156 Gene3D G3DSA:3.40.50.12280 1 148 2.0E-53 T 13-10-2018 Theam_1421 75cb171785806d8fc48c26631fbf8e46 329 Pfam PF05670 Domain of unknown function (DUF814) 232 310 8.8E-8 T 13-10-2018 IPR008532 Domain of unknown function DUF814 Theam_1421 75cb171785806d8fc48c26631fbf8e46 329 Gene3D G3DSA:3.40.50.620 2 173 5.6E-32 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1421 75cb171785806d8fc48c26631fbf8e46 329 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 5 143 3.2E-8 T 13-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 Theam_1421 75cb171785806d8fc48c26631fbf8e46 329 SUPERFAMILY SSF52402 2 230 6.17E-28 T 13-10-2018 Theam_0616 685e9f8b19f47fd5ca9cf789a2d8f3f2 164 Gene3D G3DSA:3.30.1330.50 1 163 3.9E-68 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Theam_0616 685e9f8b19f47fd5ca9cf789a2d8f3f2 164 SUPERFAMILY SSF69765 1 157 1.27E-63 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Theam_0616 685e9f8b19f47fd5ca9cf789a2d8f3f2 164 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 13-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Theam_0616 685e9f8b19f47fd5ca9cf789a2d8f3f2 164 Pfam PF02542 YgbB family 2 155 4.6E-64 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Theam_0616 685e9f8b19f47fd5ca9cf789a2d8f3f2 164 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.611 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Theam_0616 685e9f8b19f47fd5ca9cf789a2d8f3f2 164 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 156 4.0E-64 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Theam_0591 8e479ffc8757da0520c10620e5fc6b4b 158 SUPERFAMILY SSF52833 2 153 1.03E-54 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Theam_0591 8e479ffc8757da0520c10620e5fc6b4b 158 Pfam PF00578 AhpC/TSA family 5 132 1.9E-42 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Theam_0591 8e479ffc8757da0520c10620e5fc6b4b 158 PIRSF PIRSF000239 1 158 5.1E-30 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Theam_0591 8e479ffc8757da0520c10620e5fc6b4b 158 Gene3D G3DSA:3.40.30.10 3 155 7.2E-55 T 13-10-2018 Theam_1536 8fd858d6d4bbf2be6db18a8b2861d37a 298 Pfam PF01867 CRISPR associated protein Cas1 6 270 1.6E-50 T 13-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Theam_1536 8fd858d6d4bbf2be6db18a8b2861d37a 298 Gene3D G3DSA:3.100.10.20 4 78 3.9E-12 T 13-10-2018 Theam_1536 8fd858d6d4bbf2be6db18a8b2861d37a 298 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 5 282 2.6E-49 T 13-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Theam_1536 8fd858d6d4bbf2be6db18a8b2861d37a 298 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 2 295 20.399 T 13-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Theam_1536 8fd858d6d4bbf2be6db18a8b2861d37a 298 Gene3D G3DSA:1.20.120.920 85 296 1.7E-42 T 13-10-2018 Theam_1468 4115ae3097b7ed3152002575608f09a3 344 PIRSF PIRSF003161 7 344 1.7E-109 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Theam_1468 4115ae3097b7ed3152002575608f09a3 344 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 9 341 9.8E-84 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Theam_1468 4115ae3097b7ed3152002575608f09a3 344 Gene3D G3DSA:1.10.220.30 96 205 1.4E-28 T 13-10-2018 Theam_1468 4115ae3097b7ed3152002575608f09a3 344 Pfam PF14841 FliG middle domain 123 202 5.2E-25 T 13-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Theam_1468 4115ae3097b7ed3152002575608f09a3 344 Gene3D G3DSA:1.10.220.30 208 344 5.7E-43 T 13-10-2018 Theam_1468 4115ae3097b7ed3152002575608f09a3 344 Gene3D G3DSA:1.10.220.30 7 86 4.1E-16 T 13-10-2018 Theam_1468 4115ae3097b7ed3152002575608f09a3 344 SUPERFAMILY SSF48029 122 338 1.83E-60 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Theam_1468 4115ae3097b7ed3152002575608f09a3 344 SUPERFAMILY SSF48029 14 124 2.12E-15 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Theam_1468 4115ae3097b7ed3152002575608f09a3 344 Pfam PF01706 FliG C-terminal domain 230 337 1.8E-39 T 13-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Theam_1468 4115ae3097b7ed3152002575608f09a3 344 Pfam PF14842 FliG N-terminal domain 13 109 1.6E-20 T 13-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Theam_1468 4115ae3097b7ed3152002575608f09a3 344 PRINTS PR00954 Flagellar motor switch protein FliG signature 208 233 6.8E-59 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Theam_1468 4115ae3097b7ed3152002575608f09a3 344 PRINTS PR00954 Flagellar motor switch protein FliG signature 42 68 6.8E-59 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Theam_1468 4115ae3097b7ed3152002575608f09a3 344 PRINTS PR00954 Flagellar motor switch protein FliG signature 285 311 6.8E-59 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Theam_1468 4115ae3097b7ed3152002575608f09a3 344 PRINTS PR00954 Flagellar motor switch protein FliG signature 261 281 6.8E-59 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Theam_1468 4115ae3097b7ed3152002575608f09a3 344 PRINTS PR00954 Flagellar motor switch protein FliG signature 122 145 6.8E-59 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Theam_1468 4115ae3097b7ed3152002575608f09a3 344 PRINTS PR00954 Flagellar motor switch protein FliG signature 13 29 6.8E-59 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Theam_1468 4115ae3097b7ed3152002575608f09a3 344 PRINTS PR00954 Flagellar motor switch protein FliG signature 239 259 6.8E-59 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Theam_0119 88c0400d4d111e1896451ac983f2f83a 305 Pfam PF04055 Radical SAM superfamily 40 203 3.1E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0119 88c0400d4d111e1896451ac983f2f83a 305 SMART SM00729 20 247 5.3E-42 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_0119 88c0400d4d111e1896451ac983f2f83a 305 Pfam PF16199 Radical_SAM C-terminal domain 208 292 5.1E-26 T 13-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 Theam_0119 88c0400d4d111e1896451ac983f2f83a 305 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 3 304 6.4E-113 T 13-10-2018 IPR005911 Protein YhcC-like GO:0051536 Theam_0119 88c0400d4d111e1896451ac983f2f83a 305 Gene3D G3DSA:3.80.30.20 37 245 5.3E-19 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Theam_0119 88c0400d4d111e1896451ac983f2f83a 305 SUPERFAMILY SSF102114 3 260 1.57E-50 T 13-10-2018 Theam_1665 fb8e419dfa1ccf2dd84058ff5c4bd01b 242 Gene3D G3DSA:3.30.1150.10 133 242 7.6E-13 T 13-10-2018 Theam_1665 fb8e419dfa1ccf2dd84058ff5c4bd01b 242 SUPERFAMILY SSF74653 149 240 2.88E-12 T 13-10-2018 Theam_1665 fb8e419dfa1ccf2dd84058ff5c4bd01b 242 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 174 241 4.9E-11 T 13-10-2018 IPR006260 TonB/TolA, C-terminal Theam_1665 fb8e419dfa1ccf2dd84058ff5c4bd01b 242 Pfam PF13103 TonB C terminal 157 239 1.4E-13 T 13-10-2018 Theam_0289 5a3fdbbac9c444aa2ba5834c22993d38 216 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 2 213 17.125 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Theam_0289 5a3fdbbac9c444aa2ba5834c22993d38 216 Gene3D G3DSA:2.160.20.70 96 215 1.8E-25 T 13-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 Theam_0289 5a3fdbbac9c444aa2ba5834c22993d38 216 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 114 208 1.6E-19 T 13-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 Theam_0289 5a3fdbbac9c444aa2ba5834c22993d38 216 SUPERFAMILY SSF63848 112 211 1.03E-20 T 13-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 Theam_0357 a0b0ac79da7c5e183d2eed490c397be6 336 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 69 335 7.3E-77 T 13-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 Theam_0357 a0b0ac79da7c5e183d2eed490c397be6 336 Pfam PF01578 Cytochrome C assembly protein 80 332 7.3E-51 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Theam_1352 618697ff82cb9d929c58a6b9f3727f6c 192 SUPERFAMILY SSF54523 8 118 2.43E-20 T 13-10-2018 Theam_1352 618697ff82cb9d929c58a6b9f3727f6c 192 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 8.6E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1352 618697ff82cb9d929c58a6b9f3727f6c 192 PRINTS PR00813 Bacterial general secretion pathway protein G signature 7 32 4.9E-9 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Theam_1352 618697ff82cb9d929c58a6b9f3727f6c 192 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 4.9E-9 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Theam_1352 618697ff82cb9d929c58a6b9f3727f6c 192 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 9.9E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1352 618697ff82cb9d929c58a6b9f3727f6c 192 Gene3D G3DSA:3.30.700.10 8 136 2.5E-27 T 13-10-2018 Theam_1144 e24357a1d232b9210b8cff93f0f2d4d5 319 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1225 39d0f0ae1cd6b481e1e37c95e6a3ee60 395 Gene3D G3DSA:2.40.160.10 65 248 8.5E-17 T 13-10-2018 IPR023614 Porin domain superfamily Theam_1225 39d0f0ae1cd6b481e1e37c95e6a3ee60 395 Pfam PF07396 Phosphate-selective porin O and P 96 223 1.6E-7 T 13-10-2018 IPR010870 Phosphate-selective porin O/P Theam_1225 39d0f0ae1cd6b481e1e37c95e6a3ee60 395 SUPERFAMILY SSF56935 70 383 2.24E-12 T 13-10-2018 Theam_0133 8d4f50049abf156a546d7fc0898aa17f 234 ProSitePatterns PS01277 Ribonuclease PH signature. 117 129 - T 13-10-2018 IPR018336 Ribonuclease PH, conserved site Theam_0133 8d4f50049abf156a546d7fc0898aa17f 234 Pfam PF03725 3' exoribonuclease family, domain 2 156 220 4.3E-14 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Theam_0133 8d4f50049abf156a546d7fc0898aa17f 234 SUPERFAMILY SSF55666 151 233 4.32E-25 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Theam_0133 8d4f50049abf156a546d7fc0898aa17f 234 Hamap MF_00564 Ribonuclease PH [rph]. 12 233 44.441 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Theam_0133 8d4f50049abf156a546d7fc0898aa17f 234 SUPERFAMILY SSF54211 2 177 7.59E-48 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_0133 8d4f50049abf156a546d7fc0898aa17f 234 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 232 9.8E-115 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Theam_0133 8d4f50049abf156a546d7fc0898aa17f 234 Pfam PF01138 3' exoribonuclease family, domain 1 11 141 3.7E-24 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Theam_0133 8d4f50049abf156a546d7fc0898aa17f 234 Gene3D G3DSA:3.30.230.70 11 234 7.9E-63 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Theam_0545 f5d8b8d8e3e9faa9ee107dd27f542b94 312 SMART SM00382 27 231 1.3E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0545 f5d8b8d8e3e9faa9ee107dd27f542b94 312 SUPERFAMILY SSF52540 27 300 6.19E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0545 f5d8b8d8e3e9faa9ee107dd27f542b94 312 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 225 309 1.3E-23 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Theam_0545 f5d8b8d8e3e9faa9ee107dd27f542b94 312 Gene3D G3DSA:3.40.50.300 2 312 3.3E-82 T 13-10-2018 Theam_0545 f5d8b8d8e3e9faa9ee107dd27f542b94 312 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 225 290 3.8E-18 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Theam_0545 f5d8b8d8e3e9faa9ee107dd27f542b94 312 Pfam PF00005 ABC transporter 21 173 4.0E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_1195 3f22cbdef20524314cb7c59d4943cc0a 221 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 6 218 29.868 T 13-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 Theam_1195 3f22cbdef20524314cb7c59d4943cc0a 221 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 8 213 6.0E-60 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Theam_1195 3f22cbdef20524314cb7c59d4943cc0a 221 Gene3D G3DSA:3.20.20.70 1 218 2.5E-79 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1195 3f22cbdef20524314cb7c59d4943cc0a 221 SMART SM01133 7 216 3.9E-65 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Theam_1195 3f22cbdef20524314cb7c59d4943cc0a 221 PIRSF PIRSF001357 1 220 1.3E-68 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Theam_1195 3f22cbdef20524314cb7c59d4943cc0a 221 Pfam PF01791 DeoC/LacD family aldolase 22 206 2.5E-12 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Theam_1195 3f22cbdef20524314cb7c59d4943cc0a 221 SUPERFAMILY SSF51569 5 217 2.2E-66 T 13-10-2018 Theam_1086 f4b4f20e00b1b5fda8c43e34d9d43bb3 233 Gene3D G3DSA:3.30.1330.60 79 232 8.1E-43 T 13-10-2018 IPR036737 OmpA-like domain superfamily Theam_1086 f4b4f20e00b1b5fda8c43e34d9d43bb3 233 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 3 55 1.5E-16 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain Theam_1086 f4b4f20e00b1b5fda8c43e34d9d43bb3 233 Pfam PF00691 OmpA family 126 223 2.4E-15 T 13-10-2018 IPR006665 OmpA-like domain Theam_1086 f4b4f20e00b1b5fda8c43e34d9d43bb3 233 SUPERFAMILY SSF103088 114 229 1.83E-28 T 13-10-2018 IPR036737 OmpA-like domain superfamily Theam_1762 9e765e8bec2a528836b841bbaf1e7df8 325 Pfam PF02163 Peptidase family M50 7 311 1.0E-65 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Theam_1762 9e765e8bec2a528836b841bbaf1e7df8 325 Gene3D G3DSA:2.30.42.10 103 180 1.4E-16 T 13-10-2018 Theam_1762 9e765e8bec2a528836b841bbaf1e7df8 325 SUPERFAMILY SSF50156 72 171 7.89E-18 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Theam_1762 9e765e8bec2a528836b841bbaf1e7df8 325 SMART SM00228 100 163 1.6E-9 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Theam_1762 9e765e8bec2a528836b841bbaf1e7df8 325 Pfam PF13180 PDZ domain 111 171 1.3E-9 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Theam_1087 93c96cf62d0b9f3ceb27ac5aed67ad69 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 186 203 - T 13-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Theam_1087 93c96cf62d0b9f3ceb27ac5aed67ad69 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 120 209 5.5E-20 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Theam_1494 abdfe1309b2467a182f5c6b492bc4921 314 Pfam PF00146 NADH dehydrogenase 14 306 7.2E-91 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1494 abdfe1309b2467a182f5c6b492bc4921 314 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 201 214 - T 13-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1494 abdfe1309b2467a182f5c6b492bc4921 314 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 3 313 19.655 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1348 6237509ed965cf9f20069a25d4d9ad51 285 SUPERFAMILY SSF54523 212 265 4.39E-6 T 13-10-2018 Theam_0711 a0e8b6d9e6cacde30063f2d70810c4e9 97 SUPERFAMILY SSF51182 13 91 1.65E-17 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Theam_0711 a0e8b6d9e6cacde30063f2d70810c4e9 97 Pfam PF07883 Cupin domain 30 81 1.0E-9 T 13-10-2018 IPR013096 Cupin 2, conserved barrel Theam_0711 a0e8b6d9e6cacde30063f2d70810c4e9 97 Gene3D G3DSA:2.60.120.10 2 94 1.3E-14 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Theam_0935 a7edda35e79c299db67d47aff52bfc79 83 Gene3D G3DSA:1.10.10.1150 3 80 3.6E-7 T 13-10-2018 Theam_0935 a7edda35e79c299db67d47aff52bfc79 83 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 14 78 6.2E-19 T 13-10-2018 IPR008792 Coenzyme PQQ synthesis D Theam_0935 a7edda35e79c299db67d47aff52bfc79 83 TIGRFAM TIGR04353 PqqD_rel_X: PqqD family protein, HPr-rel-A system 10 79 3.7E-11 T 13-10-2018 IPR027599 PqqD family protein, HPr-rel-A system Theam_0375 1d00f7543219e00382d4f9f55d7b9e9e 407 Gene3D G3DSA:3.40.980.10 173 326 7.1E-120 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Theam_0375 1d00f7543219e00382d4f9f55d7b9e9e 407 Pfam PF03454 MoeA C-terminal region (domain IV) 339 404 1.3E-12 T 13-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0375 1d00f7543219e00382d4f9f55d7b9e9e 407 SUPERFAMILY SSF63882 5 174 8.63E-52 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0375 1d00f7543219e00382d4f9f55d7b9e9e 407 Gene3D G3DSA:2.40.340.10 327 399 7.1E-120 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0375 1d00f7543219e00382d4f9f55d7b9e9e 407 Pfam PF03453 MoeA N-terminal region (domain I and II) 6 165 3.7E-39 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0375 1d00f7543219e00382d4f9f55d7b9e9e 407 Gene3D G3DSA:2.170.190.11 47 139 7.1E-120 T 13-10-2018 Theam_0375 1d00f7543219e00382d4f9f55d7b9e9e 407 Gene3D G3DSA:3.90.105.10 23 172 7.1E-120 T 13-10-2018 Theam_0375 1d00f7543219e00382d4f9f55d7b9e9e 407 SUPERFAMILY SSF63867 330 406 1.96E-13 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0375 1d00f7543219e00382d4f9f55d7b9e9e 407 Pfam PF00994 Probable molybdopterin binding domain 178 316 4.8E-24 T 13-10-2018 IPR001453 MoaB/Mog domain Theam_0375 1d00f7543219e00382d4f9f55d7b9e9e 407 SMART SM00852 178 317 1.7E-38 T 13-10-2018 IPR001453 MoaB/Mog domain Theam_0375 1d00f7543219e00382d4f9f55d7b9e9e 407 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 175 311 2.6E-27 T 13-10-2018 IPR001453 MoaB/Mog domain Theam_0375 1d00f7543219e00382d4f9f55d7b9e9e 407 SUPERFAMILY SSF53218 173 321 2.75E-37 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Theam_0375 1d00f7543219e00382d4f9f55d7b9e9e 407 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 252 286 - T 13-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Theam_0742 7e2b2dde0eb6cb073d13c6d7c61b39f1 99 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 99 18.802 T 13-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 Theam_0742 7e2b2dde0eb6cb073d13c6d7c61b39f1 99 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 94 1.2E-23 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Theam_1525 c0f3c00bbc045353371de0699774ae17 200 Gene3D G3DSA:1.10.1760.20 1 195 3.3E-45 T 13-10-2018 Theam_1525 c0f3c00bbc045353371de0699774ae17 200 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 196 3.6E-52 T 13-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 24 34 - T 13-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 Gene3D G3DSA:3.40.50.1260 178 392 6.0E-167 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 14 402 42.514 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 PRINTS PR00477 Phosphoglycerate kinase family signature 40 62 1.0E-92 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 PRINTS PR00477 Phosphoglycerate kinase family signature 199 218 1.0E-92 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 PRINTS PR00477 Phosphoglycerate kinase family signature 355 366 1.0E-92 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 PRINTS PR00477 Phosphoglycerate kinase family signature 176 198 1.0E-92 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 PRINTS PR00477 Phosphoglycerate kinase family signature 19 35 1.0E-92 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 PRINTS PR00477 Phosphoglycerate kinase family signature 145 167 1.0E-92 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 PRINTS PR00477 Phosphoglycerate kinase family signature 321 346 1.0E-92 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 PRINTS PR00477 Phosphoglycerate kinase family signature 378 395 1.0E-92 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 PRINTS PR00477 Phosphoglycerate kinase family signature 117 132 1.0E-92 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 PIRSF PIRSF000724 4 405 1.9E-156 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 SUPERFAMILY SSF53748 17 401 1.41E-159 T 13-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 Gene3D G3DSA:3.40.50.1260 19 400 6.0E-167 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_0206 a2bf8b87eb5ac0c61734d4ee9719cf18 406 Pfam PF00162 Phosphoglycerate kinase 19 392 1.4E-163 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Theam_1303 96b6bedf90610165327a65c89e24eadc 215 SMART SM00849 12 194 1.6E-38 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_1303 96b6bedf90610165327a65c89e24eadc 215 SUPERFAMILY SSF56281 1 211 4.76E-50 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_1303 96b6bedf90610165327a65c89e24eadc 215 Gene3D G3DSA:3.60.15.10 1 212 3.5E-55 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_1303 96b6bedf90610165327a65c89e24eadc 215 Pfam PF00753 Metallo-beta-lactamase superfamily 9 194 1.1E-25 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_1109 2a22e47a7d25f44d2e53e86e1dcd553b 266 Pfam PF08704 tRNA methyltransferase complex GCD14 subunit 69 234 3.4E-33 T 13-10-2018 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 MetaCyc: PWY-6829 Theam_1109 2a22e47a7d25f44d2e53e86e1dcd553b 266 Gene3D G3DSA:3.40.50.150 70 264 1.5E-68 T 13-10-2018 Theam_1109 2a22e47a7d25f44d2e53e86e1dcd553b 266 PIRSF PIRSF017269 1 265 4.1E-80 T 13-10-2018 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 MetaCyc: PWY-6829 Theam_1109 2a22e47a7d25f44d2e53e86e1dcd553b 266 Gene3D G3DSA:3.10.330.20 4 65 9.4E-14 T 13-10-2018 Theam_1109 2a22e47a7d25f44d2e53e86e1dcd553b 266 SUPERFAMILY SSF53335 4 257 1.59E-67 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_1197 9783879dfd6d6bd2b86500a7fa126779 305 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 286 9.4E-83 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1197 9783879dfd6d6bd2b86500a7fa126779 305 Pfam PF07650 KH domain 213 292 8.9E-20 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_1197 9783879dfd6d6bd2b86500a7fa126779 305 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 173 2.2E-29 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Theam_1197 9783879dfd6d6bd2b86500a7fa126779 305 SUPERFAMILY SSF54814 186 304 2.26E-39 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Theam_1197 9783879dfd6d6bd2b86500a7fa126779 305 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 12 32 3.6E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_1197 9783879dfd6d6bd2b86500a7fa126779 305 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 79 97 3.6E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_1197 9783879dfd6d6bd2b86500a7fa126779 305 Gene3D G3DSA:3.30.300.20 191 305 4.4E-44 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Theam_1197 9783879dfd6d6bd2b86500a7fa126779 305 SUPERFAMILY SSF52540 12 211 1.27E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1197 9783879dfd6d6bd2b86500a7fa126779 305 Pfam PF01926 50S ribosome-binding GTPase 12 129 2.1E-26 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Theam_1197 9783879dfd6d6bd2b86500a7fa126779 305 Hamap MF_00367 GTPase Era [era]. 7 303 36.938 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1197 9783879dfd6d6bd2b86500a7fa126779 305 Gene3D G3DSA:3.40.50.300 4 190 3.6E-52 T 13-10-2018 Theam_1565 c9457c33c058be694fcdb8942eb9f784 362 Gene3D G3DSA:3.40.630.10 46 260 7.7E-28 T 13-10-2018 Theam_1565 c9457c33c058be694fcdb8942eb9f784 362 Pfam PF17033 Carboxypeptidase controlling helical cell shape catalytic 48 280 4.2E-35 T 13-10-2018 IPR031489 D,L-carboxypeptidase, peptidase domain Theam_1565 c9457c33c058be694fcdb8942eb9f784 362 SUPERFAMILY SSF53187 50 262 1.26E-25 T 13-10-2018 Theam_1334 a1e8e551ca36f4a2cd694c43fca45124 233 SUPERFAMILY SSF53448 3 228 1.43E-51 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_1334 a1e8e551ca36f4a2cd694c43fca45124 233 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3 227 5.2E-60 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Theam_1334 a1e8e551ca36f4a2cd694c43fca45124 233 Gene3D G3DSA:3.90.550.10 2 230 3.9E-65 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_1334 a1e8e551ca36f4a2cd694c43fca45124 233 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3 228 3.5E-54 T 13-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Theam_1334 a1e8e551ca36f4a2cd694c43fca45124 233 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 227 38.402 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Theam_0592 aa7c8362b2a8a1e2100fa7b0c16c16cf 95 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 1.4E-22 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0592 aa7c8362b2a8a1e2100fa7b0c16c16cf 95 SUPERFAMILY SSF46992 3 86 1.83E-24 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0592 aa7c8362b2a8a1e2100fa7b0c16c16cf 95 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.062 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0592 aa7c8362b2a8a1e2100fa7b0c16c16cf 95 Gene3D G3DSA:1.20.58.110 1 87 1.4E-25 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0592 aa7c8362b2a8a1e2100fa7b0c16c16cf 95 Pfam PF01649 Ribosomal protein S20 2 83 6.8E-23 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0592 aa7c8362b2a8a1e2100fa7b0c16c16cf 95 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 71 3.0E-6 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0104 d5f232324a02b84c7ef14ac1b58d458e 281 Gene3D G3DSA:3.60.15.10 26 253 1.3E-43 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_0104 d5f232324a02b84c7ef14ac1b58d458e 281 SMART SM00849 41 238 2.6E-10 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_0104 d5f232324a02b84c7ef14ac1b58d458e 281 SUPERFAMILY SSF56281 29 251 1.65E-26 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_0104 d5f232324a02b84c7ef14ac1b58d458e 281 Pfam PF00753 Metallo-beta-lactamase superfamily 41 238 4.1E-7 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_0355 67313a8ef129a4556c6d86c6da298012 480 Pfam PF02386 Cation transport protein 60 472 8.2E-59 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Theam_0355 67313a8ef129a4556c6d86c6da298012 480 PIRSF PIRSF006247 1 480 1.7E-148 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Theam_0308 1ed0166fb96eed34b7fd40ff6759b516 279 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 279 40.078 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_0308 1ed0166fb96eed34b7fd40ff6759b516 279 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 8.8E-42 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_0308 1ed0166fb96eed34b7fd40ff6759b516 279 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 8.8E-42 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_0308 1ed0166fb96eed34b7fd40ff6759b516 279 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 8.8E-42 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_0308 1ed0166fb96eed34b7fd40ff6759b516 279 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 8.8E-42 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_0308 1ed0166fb96eed34b7fd40ff6759b516 279 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 8.8E-42 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_0308 1ed0166fb96eed34b7fd40ff6759b516 279 SUPERFAMILY SSF52096 23 276 1.37E-88 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Theam_0308 1ed0166fb96eed34b7fd40ff6759b516 279 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 2 276 4.3E-125 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Theam_0308 1ed0166fb96eed34b7fd40ff6759b516 279 Pfam PF01039 Carboxyl transferase domain 58 237 1.2E-24 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Theam_0308 1ed0166fb96eed34b7fd40ff6759b516 279 Gene3D G3DSA:3.90.226.10 23 279 4.4E-90 T 13-10-2018 Theam_1734 befb3cd818c986fb283c5e76099a2ff3 859 Pfam PF01935 Domain of unknown function DUF87 458 499 4.1E-5 T 13-10-2018 IPR002789 Helicase HerA, central domain Theam_1734 befb3cd818c986fb283c5e76099a2ff3 859 Gene3D G3DSA:3.40.50.300 616 776 8.1E-17 T 13-10-2018 Theam_1734 befb3cd818c986fb283c5e76099a2ff3 859 Gene3D G3DSA:3.40.50.300 429 574 4.7E-13 T 13-10-2018 Theam_1734 befb3cd818c986fb283c5e76099a2ff3 859 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 58 208 1.8E-11 T 13-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase Theam_1734 befb3cd818c986fb283c5e76099a2ff3 859 SUPERFAMILY SSF52540 456 741 6.63E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0088 2dde3c92bb262a3ee08627620db1d5ff 185 Gene3D G3DSA:1.10.132.20 12 182 1.5E-70 T 13-10-2018 Theam_0088 2dde3c92bb262a3ee08627620db1d5ff 185 Pfam PF01765 Ribosome recycling factor 20 183 1.0E-63 T 13-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Theam_0088 2dde3c92bb262a3ee08627620db1d5ff 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.447 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Theam_0088 2dde3c92bb262a3ee08627620db1d5ff 185 SUPERFAMILY SSF55194 3 184 2.09E-69 T 13-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Theam_0088 2dde3c92bb262a3ee08627620db1d5ff 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 2.1E-62 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Theam_0088 2dde3c92bb262a3ee08627620db1d5ff 185 Gene3D G3DSA:3.30.1360.40 31 105 1.5E-70 T 13-10-2018 Theam_0793 86d22042322e4da3d4a828454f3f344b 866 Pfam PF13229 Right handed beta helix region 367 509 2.3E-11 T 13-10-2018 IPR039448 Right handed beta helix domain Theam_0793 86d22042322e4da3d4a828454f3f344b 866 SMART SM00710 396 418 2100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Theam_0793 86d22042322e4da3d4a828454f3f344b 866 SMART SM00710 442 464 890.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Theam_0793 86d22042322e4da3d4a828454f3f344b 866 SMART SM00710 419 441 71.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Theam_0793 86d22042322e4da3d4a828454f3f344b 866 SMART SM00710 235 263 1100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat Theam_0793 86d22042322e4da3d4a828454f3f344b 866 Gene3D G3DSA:2.160.20.10 87 506 1.2E-80 T 13-10-2018 IPR012334 Pectin lyase fold Theam_0793 86d22042322e4da3d4a828454f3f344b 866 SUPERFAMILY SSF51126 185 475 1.23E-20 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Theam_0062 cfed3da1e19632497eb2fd68d8da969b 302 SUPERFAMILY SSF51126 72 272 6.91E-5 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Theam_0178 b9f7b605883bb72c9ab0180c049e3a2e 314 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 120 258 3.4E-12 T 13-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 Theam_0178 b9f7b605883bb72c9ab0180c049e3a2e 314 Gene3D G3DSA:3.40.50.12710 1 312 4.8E-60 T 13-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 Theam_0178 b9f7b605883bb72c9ab0180c049e3a2e 314 SUPERFAMILY SSF53335 3 307 6.91E-54 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_0317 d15110e3aff5863cb5079257fe2a3cde 242 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 69 205 7.9E-14 T 13-10-2018 IPR010181 CGCAxxGCC motif Theam_0317 d15110e3aff5863cb5079257fe2a3cde 242 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 21 0.0016 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Theam_0317 d15110e3aff5863cb5079257fe2a3cde 242 SUPERFAMILY SSF48695 35 236 1.67E-43 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_1586 9d23bde3fca50e13bad24677a1101a12 54 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 54 20.741 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1586 9d23bde3fca50e13bad24677a1101a12 54 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 54 2.6E-28 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1586 9d23bde3fca50e13bad24677a1101a12 54 Pfam PF00471 Ribosomal protein L33 8 54 3.3E-27 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1586 9d23bde3fca50e13bad24677a1101a12 54 Gene3D G3DSA:2.20.28.120 2 54 5.6E-27 T 13-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1586 9d23bde3fca50e13bad24677a1101a12 54 SUPERFAMILY SSF57829 3 54 4.21E-23 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Theam_1586 9d23bde3fca50e13bad24677a1101a12 54 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 13-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0633 a3bad03fd753a2849736c327bd15cf1e 287 Pfam PF02153 Prephenate dehydrogenase 20 277 3.3E-80 T 13-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Theam_0633 a3bad03fd753a2849736c327bd15cf1e 287 Gene3D G3DSA:3.40.50.720 4 179 3.0E-56 T 13-10-2018 Theam_0633 a3bad03fd753a2849736c327bd15cf1e 287 SUPERFAMILY SSF51735 7 172 2.49E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0633 a3bad03fd753a2849736c327bd15cf1e 287 SUPERFAMILY SSF48179 177 285 1.25E-33 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Theam_0633 a3bad03fd753a2849736c327bd15cf1e 287 Gene3D G3DSA:1.10.3660.10 180 286 6.7E-38 T 13-10-2018 Theam_0893 554b34e9466323b32bd18e8755805ff2 402 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 138 153 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Theam_0893 554b34e9466323b32bd18e8755805ff2 402 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 172 185 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Theam_0893 554b34e9466323b32bd18e8755805ff2 402 Gene3D G3DSA:3.20.20.20 115 400 3.7E-114 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Theam_0893 554b34e9466323b32bd18e8755805ff2 402 Pfam PF00809 Pterin binding enzyme 139 382 1.6E-90 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Theam_0893 554b34e9466323b32bd18e8755805ff2 402 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 137 396 2.8E-103 T 13-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Theam_0893 554b34e9466323b32bd18e8755805ff2 402 SUPERFAMILY SSF51717 126 399 1.31E-102 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Theam_1053 e09b5eaac3cf45268e3feb4558367ecb 346 Gene3D G3DSA:3.40.250.10 3 133 1.1E-34 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Theam_1053 e09b5eaac3cf45268e3feb4558367ecb 346 SMART SM00450 3 132 2.7E-11 T 13-10-2018 IPR001763 Rhodanese-like domain Theam_1053 e09b5eaac3cf45268e3feb4558367ecb 346 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 18 316 6.8E-98 T 13-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 Theam_1053 e09b5eaac3cf45268e3feb4558367ecb 346 SUPERFAMILY SSF52540 143 308 5.4E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1053 e09b5eaac3cf45268e3feb4558367ecb 346 Pfam PF00581 Rhodanese-like domain 11 127 9.0E-9 T 13-10-2018 IPR001763 Rhodanese-like domain Theam_1053 e09b5eaac3cf45268e3feb4558367ecb 346 SUPERFAMILY SSF52821 5 132 3.01E-18 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Theam_1125 28f74a461b9f2f8130c5bc79cc546ecd 80 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 2.2E-15 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Theam_1125 28f74a461b9f2f8130c5bc79cc546ecd 80 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 58 70 2.2E-15 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Theam_1125 28f74a461b9f2f8130c5bc79cc546ecd 80 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 2.2E-15 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Theam_1125 28f74a461b9f2f8130c5bc79cc546ecd 80 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 40 56 2.2E-15 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Theam_1125 28f74a461b9f2f8130c5bc79cc546ecd 80 Gene3D G3DSA:2.40.50.970 1 77 1.4E-24 T 13-10-2018 IPR037254 HupF/HypC superfamily Theam_1125 28f74a461b9f2f8130c5bc79cc546ecd 80 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 2.0E-26 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Theam_1125 28f74a461b9f2f8130c5bc79cc546ecd 80 Pfam PF01455 HupF/HypC family 1 67 4.2E-25 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Theam_1125 28f74a461b9f2f8130c5bc79cc546ecd 80 SUPERFAMILY SSF159127 1 77 2.88E-24 T 13-10-2018 IPR037254 HupF/HypC superfamily Theam_1125 28f74a461b9f2f8130c5bc79cc546ecd 80 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 13-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site Theam_0141 7d5f8e1a3af48c5da8fb0cc25f87ff0e 423 Pfam PF13194 Domain of unknown function (DUF4010) 185 391 5.8E-58 T 13-10-2018 IPR025105 Domain of unknown function DUF4010 Theam_0141 7d5f8e1a3af48c5da8fb0cc25f87ff0e 423 Pfam PF02308 MgtC family 21 140 2.2E-21 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Theam_1670 ecda72141e8f9743120345eb3191d335 469 Gene3D G3DSA:3.20.20.70 245 449 1.3E-12 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1670 ecda72141e8f9743120345eb3191d335 469 SUPERFAMILY SSF51445 245 440 6.73E-45 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Theam_1670 ecda72141e8f9743120345eb3191d335 469 Pfam PF03537 Glycoside-hydrolase family GH114 235 451 2.9E-72 T 13-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain Theam_0723 fa675b09d94ed420c2e0684a5da4c43c 147 Pfam PF01252 Signal peptidase (SPase) II 7 144 1.5E-35 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Theam_0723 fa675b09d94ed420c2e0684a5da4c43c 147 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 128 144 1.5E-17 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Theam_0723 fa675b09d94ed420c2e0684a5da4c43c 147 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 92 107 1.5E-17 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Theam_0723 fa675b09d94ed420c2e0684a5da4c43c 147 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 44 52 1.5E-17 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Theam_0723 fa675b09d94ed420c2e0684a5da4c43c 147 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 2 147 15.066 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Theam_0723 fa675b09d94ed420c2e0684a5da4c43c 147 ProSitePatterns PS00855 Signal peptidases II signature. 95 107 - T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Theam_0723 fa675b09d94ed420c2e0684a5da4c43c 147 TIGRFAM TIGR00077 lspA: signal peptidase II 2 145 4.7E-34 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Theam_0407 999839094fb62551b7a07365ed3aad2d 58 PIRSF PIRSF000071 4 58 1.9E-26 T 13-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 Theam_0407 999839094fb62551b7a07365ed3aad2d 58 Pfam PF00301 Rubredoxin 8 53 2.3E-23 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 Theam_0407 999839094fb62551b7a07365ed3aad2d 58 Gene3D G3DSA:2.20.28.10 5 58 1.9E-26 T 13-10-2018 Theam_0407 999839094fb62551b7a07365ed3aad2d 58 ProSitePatterns PS00202 Rubredoxin signature. 37 47 - T 13-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 Theam_0407 999839094fb62551b7a07365ed3aad2d 58 PRINTS PR00163 Rubredoxin signature 7 23 7.6E-10 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 Theam_0407 999839094fb62551b7a07365ed3aad2d 58 PRINTS PR00163 Rubredoxin signature 37 53 7.6E-10 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 Theam_0407 999839094fb62551b7a07365ed3aad2d 58 SUPERFAMILY SSF57802 3 57 6.23E-24 T 13-10-2018 Theam_0955 c9582554a7fb02150075f3faee8b89fe 191 SUPERFAMILY SSF52499 5 189 6.41E-54 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Theam_0955 c9582554a7fb02150075f3faee8b89fe 191 Gene3D G3DSA:3.40.50.850 5 190 9.3E-64 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Theam_0955 c9582554a7fb02150075f3faee8b89fe 191 Pfam PF00857 Isochorismatase family 9 188 4.9E-40 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 Theam_1067 a500076ef0d3fc70147ac99bb5b87f2a 335 Pfam PF01959 3-dehydroquinate synthase (EC 4.6.1.3) 12 335 4.9E-131 T 13-10-2018 IPR002812 3-dehydroquinate synthase GO:0003856|GO:0009073|GO:0016491|GO:0055114 KEGG: 00400+1.4.1.24|MetaCyc: PWY-6160 Theam_1067 a500076ef0d3fc70147ac99bb5b87f2a 335 ProDom PD017907 3-DEHYDROQUINATE UPF0245 SYNTHASE LYASE PREDICTED SYNTHASE-LIKE ALTERNATIVE T19N8 MM1272 MK1408 13 334 3.0E-116 T 13-10-2018 IPR002812 3-dehydroquinate synthase GO:0003856|GO:0009073|GO:0016491|GO:0055114 KEGG: 00400+1.4.1.24|MetaCyc: PWY-6160 Theam_1067 a500076ef0d3fc70147ac99bb5b87f2a 335 Hamap MF_01244 3-dehydroquinate synthase [aroB']. 3 335 38.463 T 13-10-2018 IPR002812 3-dehydroquinate synthase GO:0003856|GO:0009073|GO:0016491|GO:0055114 KEGG: 00400+1.4.1.24|MetaCyc: PWY-6160 Theam_1067 a500076ef0d3fc70147ac99bb5b87f2a 335 PIRSF PIRSF006655 53 335 4.1E-125 T 13-10-2018 IPR002812 3-dehydroquinate synthase GO:0003856|GO:0009073|GO:0016491|GO:0055114 KEGG: 00400+1.4.1.24|MetaCyc: PWY-6160 Theam_1067 a500076ef0d3fc70147ac99bb5b87f2a 335 PIRSF PIRSF006655 1 62 0.0023 T 13-10-2018 IPR002812 3-dehydroquinate synthase GO:0003856|GO:0009073|GO:0016491|GO:0055114 KEGG: 00400+1.4.1.24|MetaCyc: PWY-6160 Theam_1045 65b5e7b659d0c6fe89e336741db8c806 114 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 34 107 7.3E-37 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Theam_1045 65b5e7b659d0c6fe89e336741db8c806 114 SUPERFAMILY SSF141734 10 111 1.01E-48 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Theam_1045 65b5e7b659d0c6fe89e336741db8c806 114 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 57 110 5.0E-19 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Theam_1045 65b5e7b659d0c6fe89e336741db8c806 114 Gene3D G3DSA:3.10.20.400 1 98 1.7E-42 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Theam_1045 65b5e7b659d0c6fe89e336741db8c806 114 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 8 111 32.361 T 13-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Theam_0027 6064d86d369387726b7e3780ecda8c16 99 Pfam PF12728 Helix-turn-helix domain 11 61 5.9E-10 T 13-10-2018 Theam_0027 6064d86d369387726b7e3780ecda8c16 99 SUPERFAMILY SSF46955 10 62 9.61E-5 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Theam_0249 20e800c3e0dc5d0b038533ac9a8dd480 361 SMART SM00382 168 298 1.2E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0249 20e800c3e0dc5d0b038533ac9a8dd480 361 SUPERFAMILY SSF52540 170 297 2.32E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0249 20e800c3e0dc5d0b038533ac9a8dd480 361 Gene3D G3DSA:3.40.50.300 141 296 7.0E-13 T 13-10-2018 Theam_0249 20e800c3e0dc5d0b038533ac9a8dd480 361 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 172 289 2.4E-11 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Theam_1094 14450686b836d5b547966ffb27e7a7c4 252 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 2 249 9.9E-43 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Theam_1094 14450686b836d5b547966ffb27e7a7c4 252 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 249 14.459 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Theam_1094 14450686b836d5b547966ffb27e7a7c4 252 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 244 1.4E-60 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Theam_0743 6cf0cb446a702159b443e06ed9765ef2 621 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 5 617 4.5E-227 T 13-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0743 6cf0cb446a702159b443e06ed9765ef2 621 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 158 179 2.4E-66 T 13-10-2018 Theam_0743 6cf0cb446a702159b443e06ed9765ef2 621 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 312 324 2.4E-66 T 13-10-2018 Theam_0743 6cf0cb446a702159b443e06ed9765ef2 621 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 83 108 2.4E-66 T 13-10-2018 Theam_0743 6cf0cb446a702159b443e06ed9765ef2 621 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 245 271 2.4E-66 T 13-10-2018 Theam_0743 6cf0cb446a702159b443e06ed9765ef2 621 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 414 433 2.4E-66 T 13-10-2018 Theam_0743 6cf0cb446a702159b443e06ed9765ef2 621 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 111 131 2.4E-66 T 13-10-2018 Theam_0743 6cf0cb446a702159b443e06ed9765ef2 621 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 223 244 2.4E-66 T 13-10-2018 Theam_0743 6cf0cb446a702159b443e06ed9765ef2 621 Pfam PF00361 Proton-conducting membrane transporter 134 421 2.9E-90 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0743 6cf0cb446a702159b443e06ed9765ef2 621 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 355 377 1.3E-12 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Theam_0743 6cf0cb446a702159b443e06ed9765ef2 621 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 413 435 1.3E-12 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Theam_0743 6cf0cb446a702159b443e06ed9765ef2 621 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 85 105 1.3E-12 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Theam_0743 6cf0cb446a702159b443e06ed9765ef2 621 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 59 83 1.3E-12 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Theam_0743 6cf0cb446a702159b443e06ed9765ef2 621 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 121 6.1E-24 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0453 d65b88a15d66c1551ace978217116432 329 Gene3D G3DSA:1.10.3720.10 86 312 1.0E-23 T 13-10-2018 IPR035906 MetI-like superfamily Theam_0453 d65b88a15d66c1551ace978217116432 329 SUPERFAMILY SSF161098 94 302 1.7E-18 T 13-10-2018 IPR035906 MetI-like superfamily Theam_0453 d65b88a15d66c1551ace978217116432 329 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 319 5.3E-41 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Theam_1803 219a9220f7e4dcd347027e0bf150155d 176 SUPERFAMILY SSF54523 14 131 1.15E-10 T 13-10-2018 Theam_1803 219a9220f7e4dcd347027e0bf150155d 176 Gene3D G3DSA:3.30.700.10 14 175 1.8E-8 T 13-10-2018 Theam_1803 219a9220f7e4dcd347027e0bf150155d 176 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 33 1.4E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1803 219a9220f7e4dcd347027e0bf150155d 176 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 2.8E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_0773 00cbdb20764e66ec7ec46d886432c129 202 Gene3D G3DSA:3.30.1360.170 13 169 5.4E-54 T 13-10-2018 Theam_0773 00cbdb20764e66ec7ec46d886432c129 202 SUPERFAMILY SSF69796 20 171 8.63E-50 T 13-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Theam_0773 00cbdb20764e66ec7ec46d886432c129 202 Pfam PF02511 Thymidylate synthase complementing protein 16 160 9.3E-53 T 13-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Theam_0773 00cbdb20764e66ec7ec46d886432c129 202 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 20 164 3.6E-44 T 13-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Theam_0386 8ec00996b34ababb224c0cb9f97ce9ec 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 120 2.1E-48 T 13-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Theam_0386 8ec00996b34ababb224c0cb9f97ce9ec 316 Gene3D G3DSA:3.40.50.2020 147 291 3.7E-123 T 13-10-2018 Theam_0386 8ec00996b34ababb224c0cb9f97ce9ec 316 SMART SM01400 4 120 1.7E-77 T 13-10-2018 Theam_0386 8ec00996b34ababb224c0cb9f97ce9ec 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 315 1.4E-27 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Theam_0386 8ec00996b34ababb224c0cb9f97ce9ec 316 Gene3D G3DSA:3.40.50.2020 8 303 3.7E-123 T 13-10-2018 Theam_0386 8ec00996b34ababb224c0cb9f97ce9ec 316 SUPERFAMILY SSF53271 69 305 1.51E-60 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Theam_0386 8ec00996b34ababb224c0cb9f97ce9ec 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 315 1.6E-120 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Theam_0386 8ec00996b34ababb224c0cb9f97ce9ec 316 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 315 46.838 T 13-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Theam_1162 b10ffa8460a771e8021ccbb139b956b1 285 Pfam PF00700 Bacterial flagellin C-terminal helical region 199 284 2.7E-22 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Theam_1162 b10ffa8460a771e8021ccbb139b956b1 285 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 1.1E-33 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Theam_1162 b10ffa8460a771e8021ccbb139b956b1 285 PRINTS PR00207 Flagellin signature 111 134 1.4E-14 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Theam_1162 b10ffa8460a771e8021ccbb139b956b1 285 PRINTS PR00207 Flagellin signature 76 95 1.4E-14 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Theam_1162 b10ffa8460a771e8021ccbb139b956b1 285 PRINTS PR00207 Flagellin signature 37 54 1.4E-14 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Theam_1162 b10ffa8460a771e8021ccbb139b956b1 285 Gene3D G3DSA:1.10.8.410 238 285 5.8E-26 T 13-10-2018 Theam_1162 b10ffa8460a771e8021ccbb139b956b1 285 Gene3D G3DSA:1.20.1330.10 57 237 3.9E-34 T 13-10-2018 Theam_1162 b10ffa8460a771e8021ccbb139b956b1 285 SUPERFAMILY SSF64518 1 285 9.02E-72 T 13-10-2018 Theam_0918 4bc40fcd18dd2b9d1454054f264f30f4 218 Pfam PF12225 Methylene-tetrahydrofolate reductase C terminal 113 203 1.2E-33 T 13-10-2018 IPR022026 Methylene-tetrahydrofolate reductase C-terminal Theam_0839 f25facee4da9da1a02f36603716ed39e 216 TIGRFAM TIGR00613 reco: DNA repair protein RecO 1 192 6.9E-14 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Theam_0839 f25facee4da9da1a02f36603716ed39e 216 SUPERFAMILY SSF57863 101 206 2.43E-12 T 13-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Theam_0839 f25facee4da9da1a02f36603716ed39e 216 Pfam PF02565 Recombination protein O C terminal 101 204 5.4E-7 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Theam_1168 0567d85a550faf92620377b1a2901059 355 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 36 45 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1168 0567d85a550faf92620377b1a2901059 355 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 27 352 36.873 T 13-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 Theam_1168 0567d85a550faf92620377b1a2901059 355 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 28 350 2.3E-96 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Theam_1168 0567d85a550faf92620377b1a2901059 355 Gene3D G3DSA:3.40.50.620 30 349 2.2E-126 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_1168 0567d85a550faf92620377b1a2901059 355 SUPERFAMILY SSF52374 28 351 2.09E-95 T 13-10-2018 Theam_1168 0567d85a550faf92620377b1a2901059 355 Gene3D G3DSA:1.10.240.10 214 319 2.2E-126 T 13-10-2018 Theam_1168 0567d85a550faf92620377b1a2901059 355 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 91 110 7.6E-27 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Theam_1168 0567d85a550faf92620377b1a2901059 355 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 169 190 7.6E-27 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Theam_1168 0567d85a550faf92620377b1a2901059 355 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 219 229 7.6E-27 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Theam_1168 0567d85a550faf92620377b1a2901059 355 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 40 56 7.6E-27 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Theam_1168 0567d85a550faf92620377b1a2901059 355 Pfam PF00579 tRNA synthetases class I (W and Y) 29 307 4.9E-73 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Theam_1727 cf9b180b7089091d4a32898eb490facc 156 ProSitePatterns PS00893 Nudix box signature. 45 66 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Theam_1727 cf9b180b7089091d4a32898eb490facc 156 PRINTS PR00502 NUDIX hydrolase family signature 40 54 3.1E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Theam_1727 cf9b180b7089091d4a32898eb490facc 156 PRINTS PR00502 NUDIX hydrolase family signature 54 69 3.1E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Theam_1727 cf9b180b7089091d4a32898eb490facc 156 Pfam PF00293 NUDIX domain 14 135 1.5E-16 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Theam_1727 cf9b180b7089091d4a32898eb490facc 156 Gene3D G3DSA:3.90.79.10 3 140 2.4E-35 T 13-10-2018 Theam_1727 cf9b180b7089091d4a32898eb490facc 156 SUPERFAMILY SSF55811 9 139 1.06E-23 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Theam_1207 62ca75b73a33b75b33c952c94e8169fb 557 SMART SM00471 369 475 2.0E-12 T 13-10-2018 IPR003607 HD/PDEase domain Theam_1207 62ca75b73a33b75b33c952c94e8169fb 557 Pfam PF00013 KH domain 249 305 8.6E-7 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Theam_1207 62ca75b73a33b75b33c952c94e8169fb 557 Gene3D G3DSA:1.10.3210.10 362 514 9.8E-17 T 13-10-2018 Theam_1207 62ca75b73a33b75b33c952c94e8169fb 557 SUPERFAMILY SSF54791 245 333 4.32E-16 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Theam_1207 62ca75b73a33b75b33c952c94e8169fb 557 SMART SM00322 245 312 8.4E-8 T 13-10-2018 IPR004087 K Homology domain GO:0003676 Theam_1207 62ca75b73a33b75b33c952c94e8169fb 557 Pfam PF12072 Domain of unknown function (DUF3552) 62 139 6.0E-15 T 13-10-2018 IPR022711 Ribonuclease Y, N-terminal Theam_1207 62ca75b73a33b75b33c952c94e8169fb 557 Pfam PF12072 Domain of unknown function (DUF3552) 128 241 1.3E-25 T 13-10-2018 IPR022711 Ribonuclease Y, N-terminal Theam_1207 62ca75b73a33b75b33c952c94e8169fb 557 TIGRFAM TIGR00277 HDIG: HDIG domain 369 446 9.0E-25 T 13-10-2018 IPR006675 HDIG domain Theam_1207 62ca75b73a33b75b33c952c94e8169fb 557 Gene3D G3DSA:3.30.1370.10 244 343 9.1E-9 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Theam_1207 62ca75b73a33b75b33c952c94e8169fb 557 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 50 557 9.2E-206 T 13-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 Theam_1207 62ca75b73a33b75b33c952c94e8169fb 557 SUPERFAMILY SSF109604 354 504 3.14E-30 T 13-10-2018 Theam_1207 62ca75b73a33b75b33c952c94e8169fb 557 Hamap MF_00335 Ribonuclease Y [rny]. 2 557 25.263 T 13-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 Theam_1207 62ca75b73a33b75b33c952c94e8169fb 557 Pfam PF01966 HD domain 373 465 7.4E-19 T 13-10-2018 IPR006674 HD domain Theam_0015 0de6f87ce5662b65e61496195e59ce82 806 Pfam PF13550 Putative phage tail protein 566 706 8.6E-7 T 13-10-2018 IPR032876 Tip attachment protein J Theam_0266 b757de2ade82ca3cdf4c517a81b0ffba 97 SUPERFAMILY SSF50249 8 88 3.34E-35 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0266 b757de2ade82ca3cdf4c517a81b0ffba 97 PRINTS PR00973 Ribosomal protein S17 family signature 60 70 4.8E-12 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0266 b757de2ade82ca3cdf4c517a81b0ffba 97 PRINTS PR00973 Ribosomal protein S17 family signature 70 77 4.8E-12 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0266 b757de2ade82ca3cdf4c517a81b0ffba 97 PRINTS PR00973 Ribosomal protein S17 family signature 28 51 4.8E-12 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0266 b757de2ade82ca3cdf4c517a81b0ffba 97 Gene3D G3DSA:2.40.50.140 8 97 5.1E-37 T 13-10-2018 Theam_0266 b757de2ade82ca3cdf4c517a81b0ffba 97 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 80 9.7E-37 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0266 b757de2ade82ca3cdf4c517a81b0ffba 97 Pfam PF00366 Ribosomal protein S17 14 81 4.5E-34 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0266 b757de2ade82ca3cdf4c517a81b0ffba 97 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 80 5.0E-24 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0266 b757de2ade82ca3cdf4c517a81b0ffba 97 ProSitePatterns PS00056 Ribosomal protein S17 signature. 60 72 - T 13-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0266 b757de2ade82ca3cdf4c517a81b0ffba 97 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 9 84 25.957 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0272 16c7cdc3efa4cf99728616ec661182ae 180 SUPERFAMILY SSF56053 84 177 4.32E-36 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0272 16c7cdc3efa4cf99728616ec661182ae 180 PRINTS PR00059 Ribosomal protein L6 signature 142 163 1.7E-33 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Theam_0272 16c7cdc3efa4cf99728616ec661182ae 180 PRINTS PR00059 Ribosomal protein L6 signature 100 116 1.7E-33 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Theam_0272 16c7cdc3efa4cf99728616ec661182ae 180 PRINTS PR00059 Ribosomal protein L6 signature 72 97 1.7E-33 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Theam_0272 16c7cdc3efa4cf99728616ec661182ae 180 PIRSF PIRSF002162 1 178 6.6E-55 T 13-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0272 16c7cdc3efa4cf99728616ec661182ae 180 Pfam PF00347 Ribosomal protein L6 92 165 3.9E-18 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0272 16c7cdc3efa4cf99728616ec661182ae 180 Pfam PF00347 Ribosomal protein L6 11 83 1.0E-22 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0272 16c7cdc3efa4cf99728616ec661182ae 180 Gene3D G3DSA:3.90.930.12 1 83 1.8E-31 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0272 16c7cdc3efa4cf99728616ec661182ae 180 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 1.9E-76 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Theam_0272 16c7cdc3efa4cf99728616ec661182ae 180 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 38.625 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Theam_0272 16c7cdc3efa4cf99728616ec661182ae 180 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 13-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0272 16c7cdc3efa4cf99728616ec661182ae 180 SUPERFAMILY SSF56053 1 83 1.73E-27 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0272 16c7cdc3efa4cf99728616ec661182ae 180 Gene3D G3DSA:3.90.930.12 84 180 1.8E-39 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_1485 4122fc74c94a8f652d19c96d0f1706ed 215 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 187 29.788 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Theam_1485 4122fc74c94a8f652d19c96d0f1706ed 215 SUPERFAMILY SSF53328 1 198 2.88E-63 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Theam_1485 4122fc74c94a8f652d19c96d0f1706ed 215 Gene3D G3DSA:3.40.50.170 1 205 2.0E-75 T 13-10-2018 Theam_1485 4122fc74c94a8f652d19c96d0f1706ed 215 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 1 190 1.8E-63 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Theam_1485 4122fc74c94a8f652d19c96d0f1706ed 215 Pfam PF00551 Formyl transferase 1 181 1.2E-48 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Theam_1485 4122fc74c94a8f652d19c96d0f1706ed 215 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Theam_0478 f180e792fac4e0d696579730e81f1174 361 SUPERFAMILY SSF56762 16 361 2.62E-99 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0478 f180e792fac4e0d696579730e81f1174 361 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 123 284 2.0E-36 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0478 f180e792fac4e0d696579730e81f1174 361 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 289 360 4.7E-13 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0478 f180e792fac4e0d696579730e81f1174 361 Gene3D G3DSA:1.10.645.20 5 361 3.1E-108 T 13-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0478 f180e792fac4e0d696579730e81f1174 361 Pfam PF00374 Nickel-dependent hydrogenase 43 112 3.0E-10 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Theam_0799 8d0eda4e8a08c3c706b7d46d9e5a1867 101 SUPERFAMILY SSF53146 1 99 5.41E-13 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Theam_0799 8d0eda4e8a08c3c706b7d46d9e5a1867 101 Gene3D G3DSA:3.30.420.130 1 101 1.2E-9 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Theam_0799 8d0eda4e8a08c3c706b7d46d9e5a1867 101 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 14 99 9.3E-6 T 13-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Theam_1626 905105727af1852e8c82f8f9415b3df8 299 Pfam PF01323 DSBA-like thioredoxin domain 154 194 4.7E-6 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Theam_1626 905105727af1852e8c82f8f9415b3df8 299 SUPERFAMILY SSF52833 134 295 1.03E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Theam_1626 905105727af1852e8c82f8f9415b3df8 299 Gene3D G3DSA:3.40.30.10 143 276 6.5E-19 T 13-10-2018 Theam_0917 7e30b3ab3349409977dcf9d3a8df7437 282 Gene3D G3DSA:3.10.50.40 153 244 1.2E-43 T 13-10-2018 Theam_0917 7e30b3ab3349409977dcf9d3a8df7437 282 Pfam PF09312 SurA N-terminal domain 53 126 2.1E-13 T 13-10-2018 IPR015391 SurA N-terminal Theam_0917 7e30b3ab3349409977dcf9d3a8df7437 282 Pfam PF13616 PPIC-type PPIASE domain 162 240 2.2E-12 T 13-10-2018 Theam_0917 7e30b3ab3349409977dcf9d3a8df7437 282 Gene3D G3DSA:1.10.4030.30 23 262 1.2E-43 T 13-10-2018 Theam_0917 7e30b3ab3349409977dcf9d3a8df7437 282 SUPERFAMILY SSF54534 154 241 1.49E-16 T 13-10-2018 Theam_0917 7e30b3ab3349409977dcf9d3a8df7437 282 SUPERFAMILY SSF109998 22 179 7.45E-28 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Theam_0676 59eb176ed7605e1fcf1b84986adf8425 129 Gene3D G3DSA:3.60.90.10 1 127 2.4E-48 T 13-10-2018 Theam_0676 59eb176ed7605e1fcf1b84986adf8425 129 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 2 118 31.5 T 13-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Theam_0676 59eb176ed7605e1fcf1b84986adf8425 129 Pfam PF02675 S-adenosylmethionine decarboxylase 8 114 1.9E-38 T 13-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Theam_0676 59eb176ed7605e1fcf1b84986adf8425 129 SUPERFAMILY SSF56276 3 117 1.43E-40 T 13-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 Theam_0676 59eb176ed7605e1fcf1b84986adf8425 129 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 114 1.2E-40 T 13-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Theam_0067 b338fe51764549d9a5fde4b3fc20bea4 425 SUPERFAMILY SSF56954 4 419 2.49E-56 T 13-10-2018 Theam_0067 b338fe51764549d9a5fde4b3fc20bea4 425 Pfam PF02321 Outer membrane efflux protein 20 217 1.6E-21 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Theam_0067 b338fe51764549d9a5fde4b3fc20bea4 425 Pfam PF02321 Outer membrane efflux protein 238 418 1.2E-17 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Theam_0067 b338fe51764549d9a5fde4b3fc20bea4 425 Gene3D G3DSA:1.20.1600.10 17 420 1.5E-53 T 13-10-2018 Theam_1214 00dc0030a4585dd04cd799007b43a685 244 SUPERFAMILY SSF143631 7 231 1.22E-45 T 13-10-2018 IPR003374 ApbE-like superfamily Theam_1214 00dc0030a4585dd04cd799007b43a685 244 Gene3D G3DSA:3.10.520.10 14 242 2.8E-54 T 13-10-2018 Theam_0944 de46247358860acdbf3a2cfc00ff0d41 292 Gene3D G3DSA:3.90.226.10 40 238 8.8E-73 T 13-10-2018 Theam_0944 de46247358860acdbf3a2cfc00ff0d41 292 Gene3D G3DSA:3.40.1750.20 134 200 8.8E-73 T 13-10-2018 Theam_0944 de46247358860acdbf3a2cfc00ff0d41 292 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 38 241 3.7E-74 T 13-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 Theam_0944 de46247358860acdbf3a2cfc00ff0d41 292 Pfam PF01343 Peptidase family S49 94 241 7.0E-48 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Theam_0944 de46247358860acdbf3a2cfc00ff0d41 292 SUPERFAMILY SSF52096 19 230 7.69E-40 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Theam_0908 edf26df6ed7913450dbb3dbe1f08bd4d 256 Gene3D G3DSA:3.40.50.20 1 122 1.7E-17 T 13-10-2018 Theam_0908 edf26df6ed7913450dbb3dbe1f08bd4d 256 Gene3D G3DSA:3.40.140.80 124 249 5.3E-41 T 13-10-2018 Theam_0908 edf26df6ed7913450dbb3dbe1f08bd4d 256 Pfam PF06230 Protein of unknown function (DUF1009) 51 246 1.8E-62 T 13-10-2018 IPR010415 Protein of unknown function DUF1009 KEGG: 00540+3.6.1.54 Theam_1012 e8097af5d29a298eef00ae5df8a8112c 205 Gene3D G3DSA:3.40.50.880 1 205 5.0E-80 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Theam_1012 e8097af5d29a298eef00ae5df8a8112c 205 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 201 37.55 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Theam_1012 e8097af5d29a298eef00ae5df8a8112c 205 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 200 1.9E-74 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Theam_1012 e8097af5d29a298eef00ae5df8a8112c 205 PIRSF PIRSF000495 1 204 8.2E-76 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Theam_1012 e8097af5d29a298eef00ae5df8a8112c 205 SUPERFAMILY SSF52317 1 201 2.15E-58 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Theam_1012 e8097af5d29a298eef00ae5df8a8112c 205 Pfam PF00117 Glutamine amidotransferase class-I 4 199 1.7E-24 T 13-10-2018 IPR017926 Glutamine amidotransferase Theam_1593 d6acaa1b708679cdc50668370d96fe50 63 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 50 2.4E-14 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Theam_1593 d6acaa1b708679cdc50668370d96fe50 63 SMART SM00834 1 43 9.3E-10 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Theam_1593 d6acaa1b708679cdc50668370d96fe50 63 Pfam PF09723 Zinc ribbon domain 1 41 6.3E-14 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Theam_1318 00f46b0a20e209d7ef50d749e06776bc 161 Gene3D G3DSA:3.40.50.1240 4 160 6.6E-28 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Theam_1318 00f46b0a20e209d7ef50d749e06776bc 161 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 82 8.8E-9 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Theam_1318 00f46b0a20e209d7ef50d749e06776bc 161 SUPERFAMILY SSF53254 3 148 4.71E-20 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Theam_1318 00f46b0a20e209d7ef50d749e06776bc 161 SMART SM00855 4 114 1.2E-5 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Theam_0392 8822c3b2d9c904f179a92e0eca758c71 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 1.5E-38 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Theam_0392 8822c3b2d9c904f179a92e0eca758c71 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 24.286 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Theam_0392 8822c3b2d9c904f179a92e0eca758c71 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 35 76 0.006 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Theam_0392 8822c3b2d9c904f179a92e0eca758c71 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 5.5E-20 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain Theam_0392 8822c3b2d9c904f179a92e0eca758c71 77 SUPERFAMILY SSF47336 1 77 1.24E-28 T 13-10-2018 IPR036736 ACP-like superfamily Theam_0392 8822c3b2d9c904f179a92e0eca758c71 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site Theam_0392 8822c3b2d9c904f179a92e0eca758c71 77 SMART SM00823 Phosphopantetheine attachment site 5 63 0.0012 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Theam_0392 8822c3b2d9c904f179a92e0eca758c71 77 Gene3D G3DSA:1.10.1200.10 1 77 4.7E-34 T 13-10-2018 IPR036736 ACP-like superfamily Theam_0033 f6f174e4a3642981d3a3bf92ab7101a9 425 Pfam PF02195 ParB-like nuclease domain 45 106 1.9E-4 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Theam_0033 f6f174e4a3642981d3a3bf92ab7101a9 425 SMART SM00470 30 119 1.4E-4 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Theam_0033 f6f174e4a3642981d3a3bf92ab7101a9 425 SUPERFAMILY SSF110849 33 119 3.92E-10 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Theam_0520 fe0711679d0a377522846079631185bf 331 SUPERFAMILY SSF51569 5 331 1.76E-146 T 13-10-2018 Theam_0520 fe0711679d0a377522846079631185bf 331 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 248 260 - T 13-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Theam_0520 fe0711679d0a377522846079631185bf 331 SMART SM01004 6 329 3.0E-247 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Theam_0520 fe0711679d0a377522846079631185bf 331 PIRSF PIRSF001415 1 331 6.1E-158 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Theam_0520 fe0711679d0a377522846079631185bf 331 Pfam PF00490 Delta-aminolevulinic acid dehydratase 10 328 8.3E-154 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Theam_0520 fe0711679d0a377522846079631185bf 331 Gene3D G3DSA:3.20.20.70 6 330 8.9E-150 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0520 fe0711679d0a377522846079631185bf 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 158 177 2.4E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Theam_0520 fe0711679d0a377522846079631185bf 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 273 288 2.4E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Theam_0520 fe0711679d0a377522846079631185bf 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 303 322 2.4E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Theam_0520 fe0711679d0a377522846079631185bf 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 124 138 2.4E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Theam_0520 fe0711679d0a377522846079631185bf 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 196 215 2.4E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Theam_0520 fe0711679d0a377522846079631185bf 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 248 264 2.4E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Theam_0329 459a3c4fb2c30379e1969964a8a5fa7a 286 SUPERFAMILY SSF117892 52 186 2.22E-41 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily Theam_0329 459a3c4fb2c30379e1969964a8a5fa7a 286 SMART SM00244 21 179 1.9E-59 T 13-10-2018 IPR001107 Band 7 domain Theam_0329 459a3c4fb2c30379e1969964a8a5fa7a 286 Pfam PF01145 SPFH domain / Band 7 family 25 195 1.3E-39 T 13-10-2018 IPR001107 Band 7 domain Theam_0329 459a3c4fb2c30379e1969964a8a5fa7a 286 Gene3D G3DSA:3.30.479.30 49 181 1.0E-45 T 13-10-2018 Theam_0329 459a3c4fb2c30379e1969964a8a5fa7a 286 PRINTS PR00721 Stomatin signature 131 154 3.2E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Theam_0329 459a3c4fb2c30379e1969964a8a5fa7a 286 PRINTS PR00721 Stomatin signature 155 173 3.2E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Theam_0329 459a3c4fb2c30379e1969964a8a5fa7a 286 PRINTS PR00721 Stomatin signature 111 128 3.2E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Theam_0329 459a3c4fb2c30379e1969964a8a5fa7a 286 PRINTS PR00721 Stomatin signature 174 195 3.2E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Theam_0329 459a3c4fb2c30379e1969964a8a5fa7a 286 PRINTS PR00721 Stomatin signature 76 97 3.2E-27 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Theam_1526 1d6380c76499131e785609174cb21f29 261 Pfam PF10670 Domain of unknown function (DUF4198) 18 227 9.2E-48 T 13-10-2018 IPR019613 Protein of unknown function DUF4198 Theam_0241 e06a6928b3013a7d02a1f24e04e21528 364 Gene3D G3DSA:3.40.50.150 164 355 4.2E-109 T 13-10-2018 Theam_0241 e06a6928b3013a7d02a1f24e04e21528 364 Pfam PF01170 Putative RNA methylase family UPF0020 157 328 9.7E-45 T 13-10-2018 IPR000241 Putative RNA methylase domain Theam_0241 e06a6928b3013a7d02a1f24e04e21528 364 Gene3D G3DSA:3.30.2130.30 4 245 4.2E-109 T 13-10-2018 Theam_0241 e06a6928b3013a7d02a1f24e04e21528 364 Pfam PF02926 THUMP domain 31 148 4.2E-7 T 13-10-2018 IPR004114 THUMP domain GO:0003723 Theam_0241 e06a6928b3013a7d02a1f24e04e21528 364 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 190 201 - T 13-10-2018 IPR000241 Putative RNA methylase domain Theam_0241 e06a6928b3013a7d02a1f24e04e21528 364 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 291 297 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Theam_0241 e06a6928b3013a7d02a1f24e04e21528 364 SUPERFAMILY SSF53335 137 340 7.21E-35 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_1220 2cdcecc8f64fc250074f060c4c5a228b 271 SUPERFAMILY SSF82861 12 96 1.44E-18 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Theam_1220 2cdcecc8f64fc250074f060c4c5a228b 271 Gene3D G3DSA:2.30.30.60 113 162 3.9E-22 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Theam_1220 2cdcecc8f64fc250074f060c4c5a228b 271 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 127 161 - T 13-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 Theam_1220 2cdcecc8f64fc250074f060c4c5a228b 271 Gene3D G3DSA:3.30.70.100 164 257 6.0E-34 T 13-10-2018 Theam_1220 2cdcecc8f64fc250074f060c4c5a228b 271 SUPERFAMILY SSF50182 99 163 1.21E-17 T 13-10-2018 IPR010920 LSM domain superfamily Theam_1220 2cdcecc8f64fc250074f060c4c5a228b 271 SUPERFAMILY SSF82689 166 260 1.44E-36 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Theam_1220 2cdcecc8f64fc250074f060c4c5a228b 271 Pfam PF00924 Mechanosensitive ion channel 55 252 7.9E-60 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Theam_0121 fd436822c90b0e565651a9d31f673f8c 120 Gene3D G3DSA:3.30.460.10 2 108 1.1E-38 T 13-10-2018 Theam_0121 fd436822c90b0e565651a9d31f673f8c 120 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 25.058 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Theam_0121 fd436822c90b0e565651a9d31f673f8c 120 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 5.6E-35 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Theam_0121 fd436822c90b0e565651a9d31f673f8c 120 Pfam PF02410 Ribosomal silencing factor during starvation 12 104 1.2E-26 T 13-10-2018 Theam_0121 fd436822c90b0e565651a9d31f673f8c 120 SUPERFAMILY SSF81301 2 115 2.94E-39 T 13-10-2018 Theam_1227 77501cece44eeff3159978bb03612138 248 Pfam PF09923 Uncharacterized protein conserved in bacteria (DUF2155) 149 242 1.6E-6 T 13-10-2018 IPR019225 Protein of unknown function DUF2155 Theam_1152 b9ead3bf5982070907125531f507bf8e 173 Gene3D G3DSA:2.60.450.10 30 158 3.1E-21 T 13-10-2018 Theam_1152 b9ead3bf5982070907125531f507bf8e 173 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 33 161 3.3E-22 T 13-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 Theam_1152 b9ead3bf5982070907125531f507bf8e 173 Pfam PF03968 OstA-like protein 40 142 1.1E-19 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Theam_0507 aa69929c7b6b1cd3b70b72637797ee71 423 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 173 308 1.8E-47 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Theam_0507 aa69929c7b6b1cd3b70b72637797ee71 423 SUPERFAMILY SSF69075 319 421 2.09E-19 T 13-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Theam_0507 aa69929c7b6b1cd3b70b72637797ee71 423 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 5 417 30.687 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Theam_0507 aa69929c7b6b1cd3b70b72637797ee71 423 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 9 158 8.9E-45 T 13-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Theam_0507 aa69929c7b6b1cd3b70b72637797ee71 423 PIRSF PIRSF000445 4 423 1.9E-159 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Theam_0507 aa69929c7b6b1cd3b70b72637797ee71 423 Gene3D G3DSA:3.40.50.720 163 315 6.5E-51 T 13-10-2018 Theam_0507 aa69929c7b6b1cd3b70b72637797ee71 423 SUPERFAMILY SSF69742 5 160 1.16E-44 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Theam_0507 aa69929c7b6b1cd3b70b72637797ee71 423 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 323 420 2.6E-25 T 13-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Theam_0507 aa69929c7b6b1cd3b70b72637797ee71 423 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 7 420 4.0E-147 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Theam_0507 aa69929c7b6b1cd3b70b72637797ee71 423 Gene3D G3DSA:3.30.460.30 5 160 1.8E-53 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Theam_0507 aa69929c7b6b1cd3b70b72637797ee71 423 SUPERFAMILY SSF51735 163 316 1.47E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0229 76d9dc6489ff01c1090a98efaa29f51e 194 Gene3D G3DSA:2.30.110.10 3 194 2.9E-57 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Theam_0229 76d9dc6489ff01c1090a98efaa29f51e 194 SUPERFAMILY SSF50475 18 184 1.05E-40 T 13-10-2018 Theam_0229 76d9dc6489ff01c1090a98efaa29f51e 194 Pfam PF01613 Flavin reductase like domain 23 164 3.3E-23 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Theam_0229 76d9dc6489ff01c1090a98efaa29f51e 194 SMART SM00903 20 181 3.1E-23 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Theam_0411 6a8006720e1e1c0c6cd9aadeb467ff69 274 Pfam PF13177 DNA polymerase III, delta subunit 61 144 1.1E-22 T 13-10-2018 Theam_0411 6a8006720e1e1c0c6cd9aadeb467ff69 274 Gene3D G3DSA:3.40.50.300 1 142 5.9E-34 T 13-10-2018 Theam_0411 6a8006720e1e1c0c6cd9aadeb467ff69 274 SUPERFAMILY SSF52540 24 171 3.0E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0460 db39a2b7c277986c291a682961f2fc67 172 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 8 164 4.2E-63 T 13-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Theam_0460 db39a2b7c277986c291a682961f2fc67 172 SUPERFAMILY SSF55021 8 82 4.89E-23 T 13-10-2018 Theam_0460 db39a2b7c277986c291a682961f2fc67 172 Pfam PF10369 Small subunit of acetolactate synthase 90 163 1.9E-27 T 13-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Theam_0460 db39a2b7c277986c291a682961f2fc67 172 Pfam PF13710 ACT domain 17 79 2.5E-17 T 13-10-2018 Theam_0460 db39a2b7c277986c291a682961f2fc67 172 Gene3D G3DSA:3.30.70.260 5 85 9.7E-36 T 13-10-2018 Theam_0460 db39a2b7c277986c291a682961f2fc67 172 SUPERFAMILY SSF55021 83 163 1.25E-23 T 13-10-2018 Theam_0460 db39a2b7c277986c291a682961f2fc67 172 Gene3D G3DSA:3.30.70.1150 89 170 1.3E-28 T 13-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Theam_0460 db39a2b7c277986c291a682961f2fc67 172 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 8 82 5.0E-23 T 13-10-2018 Theam_1182 045498d8c48c8386fa102556adb71cc1 586 SUPERFAMILY SSF47781 479 580 2.83E-12 T 13-10-2018 IPR010994 RuvA domain 2-like Theam_1182 045498d8c48c8386fa102556adb71cc1 586 Pfam PF01541 GIY-YIG catalytic domain 13 84 9.2E-11 T 13-10-2018 IPR000305 GIY-YIG endonuclease Theam_1182 045498d8c48c8386fa102556adb71cc1 586 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 579 22.941 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Theam_1182 045498d8c48c8386fa102556adb71cc1 586 Gene3D G3DSA:3.30.420.340 358 521 5.7E-48 T 13-10-2018 IPR038476 UvrC homology region 2 superfamily Theam_1182 045498d8c48c8386fa102556adb71cc1 586 SUPERFAMILY SSF46600 181 233 1.31E-12 T 13-10-2018 IPR036876 UVR domain superfamily Theam_1182 045498d8c48c8386fa102556adb71cc1 586 SMART SM00465 11 92 3.3E-20 T 13-10-2018 IPR000305 GIY-YIG endonuclease Theam_1182 045498d8c48c8386fa102556adb71cc1 586 Pfam PF02151 UvrB/uvrC motif 196 229 4.4E-9 T 13-10-2018 IPR001943 UVR domain GO:0005515 Theam_1182 045498d8c48c8386fa102556adb71cc1 586 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 374 513 1.1E-46 T 13-10-2018 IPR001162 UvrC family homology region Theam_1182 045498d8c48c8386fa102556adb71cc1 586 SUPERFAMILY SSF82771 11 94 1.27E-19 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Theam_1182 045498d8c48c8386fa102556adb71cc1 586 Gene3D G3DSA:4.10.860.10 191 233 1.1E-5 T 13-10-2018 Theam_1182 045498d8c48c8386fa102556adb71cc1 586 Gene3D G3DSA:3.40.1440.10 1 96 5.3E-29 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Theam_1182 045498d8c48c8386fa102556adb71cc1 586 Gene3D G3DSA:1.10.150.20 522 578 4.2E-9 T 13-10-2018 Theam_0259 192f05db25cbd55e75718514989d0c82 107 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 107 22.524 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Theam_0259 192f05db25cbd55e75718514989d0c82 107 SUPERFAMILY SSF54189 2 104 9.71E-30 T 13-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0259 192f05db25cbd55e75718514989d0c82 107 Gene3D G3DSA:3.30.70.330 1 107 1.7E-29 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Theam_0259 192f05db25cbd55e75718514989d0c82 107 Pfam PF00276 Ribosomal protein L23 6 103 7.7E-32 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Theam_0922 7dd47ddfafd23a5ad137416e2fbe78bd 329 PIRSF PIRSF005644 1 329 5.7E-121 T 13-10-2018 IPR011854 Carbamoyl dehydratase HypE Theam_0922 7dd47ddfafd23a5ad137416e2fbe78bd 329 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 4 329 1.2E-130 T 13-10-2018 IPR011854 Carbamoyl dehydratase HypE Theam_0922 7dd47ddfafd23a5ad137416e2fbe78bd 329 Gene3D G3DSA:3.90.650.10 154 329 1.0E-52 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Theam_0922 7dd47ddfafd23a5ad137416e2fbe78bd 329 Pfam PF00586 AIR synthase related protein, N-terminal domain 37 148 5.5E-17 T 13-10-2018 IPR016188 PurM-like, N-terminal domain Theam_0922 7dd47ddfafd23a5ad137416e2fbe78bd 329 SUPERFAMILY SSF55326 8 148 1.64E-33 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Theam_0922 7dd47ddfafd23a5ad137416e2fbe78bd 329 Pfam PF02769 AIR synthase related protein, C-terminal domain 158 301 9.3E-26 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Theam_0922 7dd47ddfafd23a5ad137416e2fbe78bd 329 SUPERFAMILY SSF56042 153 323 1.94E-44 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Theam_0922 7dd47ddfafd23a5ad137416e2fbe78bd 329 Gene3D G3DSA:3.30.1330.10 6 151 1.3E-50 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Theam_0660 1a8c9640c1de29b73953c7ec7bf565df 268 Pfam PF02706 Chain length determinant protein 9 52 5.2E-9 T 13-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Theam_0733 23541f0c6710e5c6c18921b51dfcf677 161 SUPERFAMILY SSF143243 7 154 6.41E-43 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0733 23541f0c6710e5c6c18921b51dfcf677 161 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 32 151 3.4E-36 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0733 23541f0c6710e5c6c18921b51dfcf677 161 Gene3D G3DSA:3.30.460.80 2 129 1.2E-36 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0733 23541f0c6710e5c6c18921b51dfcf677 161 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 89 127 3.0E-7 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1292 14b60e342f3776e04c23026de19acd5e 535 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 62 222 5.9E-23 T 13-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Theam_1330 53866c6a7863b60b25f6850aa652c7c6 427 Pfam PF01979 Amidohydrolase family 54 424 1.1E-30 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Theam_1330 53866c6a7863b60b25f6850aa652c7c6 427 Gene3D G3DSA:2.30.40.10 11 424 7.7E-141 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Theam_1330 53866c6a7863b60b25f6850aa652c7c6 427 ProSitePatterns PS00483 Dihydroorotase signature 2. 306 317 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1330 53866c6a7863b60b25f6850aa652c7c6 427 Hamap MF_00220_B Dihydroorotase [pyrC]. 5 427 43.839 T 13-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_1330 53866c6a7863b60b25f6850aa652c7c6 427 SUPERFAMILY SSF51556 58 368 1.13E-107 T 13-10-2018 IPR032466 Metal-dependent hydrolase Theam_1330 53866c6a7863b60b25f6850aa652c7c6 427 SUPERFAMILY SSF51338 4 426 2.09E-26 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Theam_1330 53866c6a7863b60b25f6850aa652c7c6 427 Gene3D G3DSA:3.20.20.140 59 371 7.7E-141 T 13-10-2018 Theam_1330 53866c6a7863b60b25f6850aa652c7c6 427 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 426 4.3E-131 T 13-10-2018 Theam_0214 05fbf2149d0f3c781bc06bb39088e411 142 SUPERFAMILY SSF46785 8 135 1.09E-32 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0214 05fbf2149d0f3c781bc06bb39088e411 142 Gene3D G3DSA:1.10.10.10 2 87 9.9E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0214 05fbf2149d0f3c781bc06bb39088e411 142 Pfam PF01475 Ferric uptake regulator family 17 107 4.1E-28 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Theam_0214 05fbf2149d0f3c781bc06bb39088e411 142 Gene3D G3DSA:3.30.1490.190 89 141 3.4E-9 T 13-10-2018 Theam_0283 2770ca75b1a3fc9f65eaae8b68514914 129 SUPERFAMILY SSF53137 14 129 2.29E-44 T 13-10-2018 Theam_0283 2770ca75b1a3fc9f65eaae8b68514914 129 Pfam PF00411 Ribosomal protein S11 19 128 8.4E-46 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Theam_0283 2770ca75b1a3fc9f65eaae8b68514914 129 PIRSF PIRSF002131 1 129 1.0E-51 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Theam_0283 2770ca75b1a3fc9f65eaae8b68514914 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.702 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Theam_0283 2770ca75b1a3fc9f65eaae8b68514914 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 13-10-2018 IPR018102 Ribosomal S11, conserved site Theam_0283 2770ca75b1a3fc9f65eaae8b68514914 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 9 126 2.1E-53 T 13-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0283 2770ca75b1a3fc9f65eaae8b68514914 129 Gene3D G3DSA:3.30.420.80 2 129 7.3E-51 T 13-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Theam_1429 3ca79b17e0c1f16505170e8d86139a77 1051 Pfam PF00176 SNF2 family N-terminal domain 336 455 1.6E-8 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Theam_1429 3ca79b17e0c1f16505170e8d86139a77 1051 SMART SM00487 242 412 2.6E-6 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Theam_1429 3ca79b17e0c1f16505170e8d86139a77 1051 SUPERFAMILY SSF52540 209 421 1.76E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1429 3ca79b17e0c1f16505170e8d86139a77 1051 SUPERFAMILY SSF52540 331 820 7.73E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1429 3ca79b17e0c1f16505170e8d86139a77 1051 SUPERFAMILY SSF56024 108 193 2.04E-8 T 13-10-2018 Theam_1429 3ca79b17e0c1f16505170e8d86139a77 1051 Pfam PF13091 PLD-like domain 29 188 1.4E-13 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Theam_1429 3ca79b17e0c1f16505170e8d86139a77 1051 Pfam PF00271 Helicase conserved C-terminal domain 643 764 3.0E-21 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_1429 3ca79b17e0c1f16505170e8d86139a77 1051 Gene3D G3DSA:3.40.50.10810 244 325 5.9E-7 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Theam_1429 3ca79b17e0c1f16505170e8d86139a77 1051 Gene3D G3DSA:3.40.50.10810 326 473 2.4E-12 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Theam_1429 3ca79b17e0c1f16505170e8d86139a77 1051 Gene3D G3DSA:3.40.50.300 573 798 1.4E-39 T 13-10-2018 Theam_1429 3ca79b17e0c1f16505170e8d86139a77 1051 SMART SM00490 674 764 4.5E-21 T 13-10-2018 IPR001650 Helicase, C-terminal Theam_1429 3ca79b17e0c1f16505170e8d86139a77 1051 Gene3D G3DSA:3.30.870.10 2 206 5.1E-27 T 13-10-2018 Theam_0589 e6493b4abddb4b221f01c8105a7b03c2 387 Pfam PF00155 Aminotransferase class I and II 30 373 6.4E-53 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Theam_0589 e6493b4abddb4b221f01c8105a7b03c2 387 SUPERFAMILY SSF53383 2 381 1.21E-94 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Theam_0589 e6493b4abddb4b221f01c8105a7b03c2 387 Gene3D G3DSA:3.90.1150.10 14 365 1.7E-107 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Theam_0589 e6493b4abddb4b221f01c8105a7b03c2 387 Gene3D G3DSA:3.40.640.10 42 280 1.7E-107 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Theam_0589 e6493b4abddb4b221f01c8105a7b03c2 387 TIGRFAM TIGR03537 DapC: succinyldiaminopimelate transaminase 29 377 1.0E-176 T 13-10-2018 IPR019877 Succinyldiaminopimelate transaminase, DapC Theam_0165 78c6d99453912dd236687d85ba4477cf 764 Pfam PF02743 Cache domain 45 388 1.5E-17 T 13-10-2018 IPR033479 Double Cache domain 1 Theam_0165 78c6d99453912dd236687d85ba4477cf 764 SUPERFAMILY SSF58104 450 760 1.44E-54 T 13-10-2018 Theam_0165 78c6d99453912dd236687d85ba4477cf 764 SMART SM00283 504 759 4.4E-31 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Theam_0165 78c6d99453912dd236687d85ba4477cf 764 Pfam PF00672 HAMP domain 429 476 3.1E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Theam_0165 78c6d99453912dd236687d85ba4477cf 764 Gene3D G3DSA:1.10.287.950 428 761 2.8E-57 T 13-10-2018 Theam_0165 78c6d99453912dd236687d85ba4477cf 764 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 575 680 1.8E-28 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Theam_0165 78c6d99453912dd236687d85ba4477cf 764 Gene3D G3DSA:3.30.450.20 253 407 1.9E-11 T 13-10-2018 Theam_0165 78c6d99453912dd236687d85ba4477cf 764 SMART SM00304 428 482 4.2E-12 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Theam_0770 b9a6084176ec2eb744b78a7d2099302f 333 SUPERFAMILY SSF64182 20 318 4.58E-68 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily Theam_0770 b9a6084176ec2eb744b78a7d2099302f 333 Pfam PF02272 DHHA1 domain 239 315 1.0E-13 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Theam_0770 b9a6084176ec2eb744b78a7d2099302f 333 Gene3D G3DSA:3.10.310.30 204 326 3.7E-37 T 13-10-2018 Theam_0770 b9a6084176ec2eb744b78a7d2099302f 333 Pfam PF01368 DHH family 20 161 1.7E-14 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Theam_0770 b9a6084176ec2eb744b78a7d2099302f 333 Gene3D G3DSA:3.90.1640.10 1 201 1.2E-58 T 13-10-2018 Theam_0861 d7feffdcf7a4d85465e592d56e723723 518 Pfam PF07690 Major Facilitator Superfamily 13 406 3.8E-56 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Theam_0861 d7feffdcf7a4d85465e592d56e723723 518 ProSitePatterns PS00217 Sugar transport proteins signature 2. 103 128 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Theam_0861 d7feffdcf7a4d85465e592d56e723723 518 Gene3D G3DSA:1.20.1720.10 9 216 7.5E-57 T 13-10-2018 Theam_0861 d7feffdcf7a4d85465e592d56e723723 518 SUPERFAMILY SSF103473 7 500 1.96E-68 T 13-10-2018 IPR036259 MFS transporter superfamily Theam_0861 d7feffdcf7a4d85465e592d56e723723 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 10 34 2.8E-7 T 13-10-2018 Theam_0861 d7feffdcf7a4d85465e592d56e723723 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 156 180 2.8E-7 T 13-10-2018 Theam_0861 d7feffdcf7a4d85465e592d56e723723 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 131 155 2.8E-7 T 13-10-2018 Theam_0861 d7feffdcf7a4d85465e592d56e723723 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 101 121 2.8E-7 T 13-10-2018 Theam_0861 d7feffdcf7a4d85465e592d56e723723 518 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 10 499 5.9E-122 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Theam_0778 63fceeb184ff5a808d84b0c2b31b5b38 266 Pfam PF17170 6-bladed beta-propeller 108 181 1.5E-7 T 13-10-2018 Theam_0778 63fceeb184ff5a808d84b0c2b31b5b38 266 SUPERFAMILY SSF101898 20 261 1.33E-26 T 13-10-2018 Theam_0778 63fceeb184ff5a808d84b0c2b31b5b38 266 Pfam PF13570 PQQ-like domain 73 90 0.002 T 13-10-2018 IPR025666 Pyrrolo-quinoline quinone-like domain Theam_0778 63fceeb184ff5a808d84b0c2b31b5b38 266 Gene3D G3DSA:2.120.10.30 16 137 5.7E-16 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Theam_0778 63fceeb184ff5a808d84b0c2b31b5b38 266 Gene3D G3DSA:2.120.10.30 138 265 5.3E-23 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Theam_0897 8d0a784f34ea55e5c2da09d4f98938c6 533 Gene3D G3DSA:3.40.50.300 264 533 3.2E-117 T 13-10-2018 Theam_0897 8d0a784f34ea55e5c2da09d4f98938c6 533 SUPERFAMILY SSF52540 148 531 9.08E-105 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0897 8d0a784f34ea55e5c2da09d4f98938c6 533 Pfam PF00437 Type II/IV secretion system protein 166 427 1.1E-84 T 13-10-2018 IPR001482 Type II/IV secretion system protein Theam_0897 8d0a784f34ea55e5c2da09d4f98938c6 533 Gene3D G3DSA:3.30.450.90 128 259 3.3E-47 T 13-10-2018 Theam_0897 8d0a784f34ea55e5c2da09d4f98938c6 533 Gene3D G3DSA:3.30.300.160 54 127 2.2E-6 T 13-10-2018 Theam_0897 8d0a784f34ea55e5c2da09d4f98938c6 533 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 17 131 6.9E-12 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal Theam_0897 8d0a784f34ea55e5c2da09d4f98938c6 533 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 355 369 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Theam_0897 8d0a784f34ea55e5c2da09d4f98938c6 533 SUPERFAMILY SSF160246 5 128 2.88E-14 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Theam_1736 0f98064bdbbdb388d23dbc919dafc7b5 289 SUPERFAMILY SSF55174 166 204 4.58E-7 T 13-10-2018 Theam_1736 0f98064bdbbdb388d23dbc919dafc7b5 289 Pfam PF01479 S4 domain 171 200 1.8E-7 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_1736 0f98064bdbbdb388d23dbc919dafc7b5 289 Gene3D G3DSA:3.10.290.10 163 211 1.6E-7 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Theam_0844 9bb608cc8da0d71aacb294d950a2c43a 321 Gene3D G3DSA:3.40.50.2300 175 320 1.4E-30 T 13-10-2018 Theam_0844 9bb608cc8da0d71aacb294d950a2c43a 321 Gene3D G3DSA:2.30.30.40 40 157 6.3E-25 T 13-10-2018 Theam_0844 9bb608cc8da0d71aacb294d950a2c43a 321 SMART SM00260 16 163 1.3E-19 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Theam_0844 9bb608cc8da0d71aacb294d950a2c43a 321 PIRSF PIRSF002867 1 321 1.2E-87 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV Theam_0844 9bb608cc8da0d71aacb294d950a2c43a 321 SMART SM00448 189 314 9.7E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_0844 9bb608cc8da0d71aacb294d950a2c43a 321 Pfam PF00072 Response regulator receiver domain 191 314 2.1E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_0844 9bb608cc8da0d71aacb294d950a2c43a 321 Gene3D G3DSA:2.40.50.180 46 162 6.3E-25 T 13-10-2018 Theam_0844 9bb608cc8da0d71aacb294d950a2c43a 321 SUPERFAMILY SSF50341 37 167 2.75E-23 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Theam_0844 9bb608cc8da0d71aacb294d950a2c43a 321 Pfam PF01584 CheW-like domain 40 165 5.1E-25 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Theam_0844 9bb608cc8da0d71aacb294d950a2c43a 321 SUPERFAMILY SSF52172 188 317 8.11E-28 T 13-10-2018 IPR011006 CheY-like superfamily Theam_0476 bd6958d5789fbc59c5302446d1bc6320 136 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 77 88 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0476 bd6958d5789fbc59c5302446d1bc6320 136 Pfam PF12838 4Fe-4S dicluster domain 43 89 3.0E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_0476 bd6958d5789fbc59c5302446d1bc6320 136 Gene3D G3DSA:3.30.70.3270 21 136 1.9E-15 T 13-10-2018 Theam_0476 bd6958d5789fbc59c5302446d1bc6320 136 SUPERFAMILY SSF54862 20 99 1.07E-19 T 13-10-2018 Theam_0854 d306a79de6c1d3740db1b4a804df1e65 485 SUPERFAMILY SSF53244 326 476 3.14E-44 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Theam_0854 d306a79de6c1d3740db1b4a804df1e65 485 Pfam PF08245 Mur ligase middle domain 111 306 5.5E-47 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Theam_0854 d306a79de6c1d3740db1b4a804df1e65 485 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 407 1.5E-21 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Theam_0854 d306a79de6c1d3740db1b4a804df1e65 485 Gene3D G3DSA:3.40.1390.10 8 101 1.5E-24 T 13-10-2018 Theam_0854 d306a79de6c1d3740db1b4a804df1e65 485 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 476 33.936 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Theam_0854 d306a79de6c1d3740db1b4a804df1e65 485 SUPERFAMILY SSF63418 11 100 2.09E-22 T 13-10-2018 IPR035911 MurE/MurF, N-terminal Theam_0854 d306a79de6c1d3740db1b4a804df1e65 485 Pfam PF01225 Mur ligase family, catalytic domain 21 97 1.1E-13 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Theam_0854 d306a79de6c1d3740db1b4a804df1e65 485 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 19 476 3.0E-153 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Theam_0854 d306a79de6c1d3740db1b4a804df1e65 485 Gene3D G3DSA:3.40.1190.10 102 330 2.6E-70 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Theam_0854 d306a79de6c1d3740db1b4a804df1e65 485 SUPERFAMILY SSF53623 102 324 8.24E-63 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Theam_0854 d306a79de6c1d3740db1b4a804df1e65 485 Gene3D G3DSA:3.90.190.20 331 482 4.2E-56 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Theam_1647 c809db15062cf758f04f64af8060130b 487 Pfam PF01425 Amidase 24 469 1.2E-171 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Theam_1647 c809db15062cf758f04f64af8060130b 487 Gene3D G3DSA:3.90.1300.10 3 486 2.8E-203 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Theam_1647 c809db15062cf758f04f64af8060130b 487 SUPERFAMILY SSF75304 1 482 9.16E-171 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Theam_1647 c809db15062cf758f04f64af8060130b 487 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 480 95.34 T 13-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Theam_1647 c809db15062cf758f04f64af8060130b 487 PIRSF PIRSF001221 447 481 0.0034 T 13-10-2018 Theam_1647 c809db15062cf758f04f64af8060130b 487 PIRSF PIRSF001221 1 452 1.3E-47 T 13-10-2018 Theam_1647 c809db15062cf758f04f64af8060130b 487 ProSitePatterns PS00571 Amidases signature. 154 185 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Theam_1647 c809db15062cf758f04f64af8060130b 487 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 480 5.4E-201 T 13-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Theam_0794 6badadcdc11b2e18bcbbec99da265e6c 381 SUPERFAMILY SSF51230 198 271 2.62E-7 T 13-10-2018 IPR011053 Single hybrid motif Theam_0794 6badadcdc11b2e18bcbbec99da265e6c 381 Gene3D G3DSA:2.40.50.100 195 271 2.3E-8 T 13-10-2018 Theam_0794 6badadcdc11b2e18bcbbec99da265e6c 381 Pfam PF13437 HlyD family secretion protein 243 319 8.1E-9 T 13-10-2018 Theam_0794 6badadcdc11b2e18bcbbec99da265e6c 381 Gene3D G3DSA:2.40.10.220 18 123 1.2E-15 T 13-10-2018 Theam_1048 30b4af13ca9bb6c4785528ba36ff2ab3 289 Pfam PF00990 Diguanylate cyclase, GGDEF domain 137 288 2.3E-38 T 13-10-2018 IPR000160 GGDEF domain Theam_1048 30b4af13ca9bb6c4785528ba36ff2ab3 289 Gene3D G3DSA:3.30.70.270 128 289 3.7E-44 T 13-10-2018 Theam_1048 30b4af13ca9bb6c4785528ba36ff2ab3 289 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 134 288 1.6E-39 T 13-10-2018 IPR000160 GGDEF domain Theam_1048 30b4af13ca9bb6c4785528ba36ff2ab3 289 SMART SM00267 126 288 1.1E-37 T 13-10-2018 IPR000160 GGDEF domain Theam_1048 30b4af13ca9bb6c4785528ba36ff2ab3 289 SUPERFAMILY SSF55073 142 287 2.98E-38 T 13-10-2018 IPR029787 Nucleotide cyclase Theam_1477 104e5bf40c27e15f44f2615339956550 268 Gene3D G3DSA:3.40.830.10 1 268 8.7E-65 T 13-10-2018 Theam_1477 104e5bf40c27e15f44f2615339956550 268 Hamap MF_00055 MEMO1 family protein . 1 268 55.965 T 13-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 Theam_1477 104e5bf40c27e15f44f2615339956550 268 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 3 267 7.1E-93 T 13-10-2018 Theam_1477 104e5bf40c27e15f44f2615339956550 268 Pfam PF01875 Memo-like protein 5 265 2.6E-72 T 13-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 Theam_1353 851b618f29efef6a39638b0f3ff13f0f 668 Pfam PF02516 Oligosaccharyl transferase STT3 subunit 42 449 5.0E-13 T 13-10-2018 IPR003674 Oligosaccharyl transferase, STT3 subunit GO:0004576|GO:0006486|GO:0016020 Theam_1353 851b618f29efef6a39638b0f3ff13f0f 668 Gene3D G3DSA:3.40.1380.40 396 508 1.8E-9 T 13-10-2018 Theam_0176 cac552e51492a90cc61ad04fe934655d 200 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 25 196 7.8E-47 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Theam_0176 cac552e51492a90cc61ad04fe934655d 200 Gene3D G3DSA:3.60.140.10 11 199 2.0E-54 T 13-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Theam_0176 cac552e51492a90cc61ad04fe934655d 200 SUPERFAMILY SSF64438 15 198 7.14E-52 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Theam_0848 d328a10e8765a9458acf9017a6d99720 172 SUPERFAMILY SSF75708 3 171 2.62E-16 T 13-10-2018 Theam_0619 5f0b75466631757b5c5d36456910931e 270 Pfam PF12706 Beta-lactamase superfamily domain 42 225 5.7E-24 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_0619 5f0b75466631757b5c5d36456910931e 270 Gene3D G3DSA:3.60.15.10 11 268 6.5E-32 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_0619 5f0b75466631757b5c5d36456910931e 270 SUPERFAMILY SSF56281 11 260 1.02E-36 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_0032 76a86033018b80682a9d7c455bafa29d 468 SUPERFAMILY SSF53098 169 302 3.67E-17 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Theam_0032 76a86033018b80682a9d7c455bafa29d 468 Gene3D G3DSA:3.30.420.10 150 344 2.6E-15 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Theam_0032 76a86033018b80682a9d7c455bafa29d 468 Pfam PF13384 Homeodomain-like domain 7 38 2.9E-6 T 13-10-2018 Theam_0032 76a86033018b80682a9d7c455bafa29d 468 Pfam PF00665 Integrase core domain 150 269 1.2E-8 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Theam_0032 76a86033018b80682a9d7c455bafa29d 468 Gene3D G3DSA:1.10.10.60 4 38 5.5E-6 T 13-10-2018 Theam_1146 0bad37f86aa062d83a3d1316a51f0e42 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 25 2.0E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_0332 09d8e75c549f6f3f14b734c3631a4fd3 266 PIRSF PIRSF000401 49 266 1.9E-61 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Theam_0332 09d8e75c549f6f3f14b734c3631a4fd3 266 PIRSF PIRSF000401 4 60 110.0 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Theam_0332 09d8e75c549f6f3f14b734c3631a4fd3 266 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 1 266 28.505 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Theam_0332 09d8e75c549f6f3f14b734c3631a4fd3 266 Gene3D G3DSA:3.40.50.150 75 266 5.6E-55 T 13-10-2018 Theam_0332 09d8e75c549f6f3f14b734c3631a4fd3 266 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 59 266 2.1E-56 T 13-10-2018 Theam_0332 09d8e75c549f6f3f14b734c3631a4fd3 266 SUPERFAMILY SSF53335 50 266 1.36E-42 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_0713 2d7aadfe222aa68038a8f4b37bf84f57 247 SUPERFAMILY SSF110997 175 244 6.67E-12 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Theam_0713 2d7aadfe222aa68038a8f4b37bf84f57 247 Pfam PF03330 Lytic transglycolase 67 156 2.5E-29 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Theam_0713 2d7aadfe222aa68038a8f4b37bf84f57 247 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 18 159 25.796 T 13-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 Theam_0713 2d7aadfe222aa68038a8f4b37bf84f57 247 Gene3D G3DSA:2.40.40.10 66 159 1.9E-40 T 13-10-2018 IPR036908 RlpA-like domain superfamily Theam_0713 2d7aadfe222aa68038a8f4b37bf84f57 247 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 69 160 1.6E-47 T 13-10-2018 IPR012997 Rare lipoprotein A Theam_0713 2d7aadfe222aa68038a8f4b37bf84f57 247 Pfam PF05036 Sporulation related domain 174 244 2.7E-9 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Theam_0713 2d7aadfe222aa68038a8f4b37bf84f57 247 Gene3D G3DSA:3.30.70.1070 175 246 1.4E-7 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Theam_0713 2d7aadfe222aa68038a8f4b37bf84f57 247 SUPERFAMILY SSF50685 62 156 1.43E-13 T 13-10-2018 IPR036908 RlpA-like domain superfamily Theam_0621 3778b9837dd2a75e04eb539a1e26b591 334 Hamap MF_00117 33 kDa chaperonin [hslO]. 37 329 35.949 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Theam_0621 3778b9837dd2a75e04eb539a1e26b591 334 SUPERFAMILY SSF118352 272 328 9.94E-15 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Theam_0621 3778b9837dd2a75e04eb539a1e26b591 334 PIRSF PIRSF005261 18 330 1.4E-76 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Theam_0621 3778b9837dd2a75e04eb539a1e26b591 334 Gene3D G3DSA:3.90.1280.10 276 333 2.3E-17 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Theam_0621 3778b9837dd2a75e04eb539a1e26b591 334 Gene3D G3DSA:3.55.30.10 28 275 2.9E-81 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Theam_0621 3778b9837dd2a75e04eb539a1e26b591 334 Pfam PF01430 Hsp33 protein 39 318 1.3E-78 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Theam_0621 3778b9837dd2a75e04eb539a1e26b591 334 SUPERFAMILY SSF64397 38 280 1.44E-63 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Theam_0180 dfc119a797311d5481b4f26adb4e5fd8 419 PIRSF PIRSF001549 1 394 2.6E-79 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Theam_0180 dfc119a797311d5481b4f26adb4e5fd8 419 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 368 29.75 T 13-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 Theam_0180 dfc119a797311d5481b4f26adb4e5fd8 419 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 12 317 1.2E-88 T 13-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 Theam_0180 dfc119a797311d5481b4f26adb4e5fd8 419 SUPERFAMILY SSF55681 5 320 1.2E-60 T 13-10-2018 Theam_0180 dfc119a797311d5481b4f26adb4e5fd8 419 Gene3D G3DSA:3.30.930.10 2 317 6.5E-85 T 13-10-2018 Theam_0180 dfc119a797311d5481b4f26adb4e5fd8 419 Pfam PF13393 Histidyl-tRNA synthetase 9 312 2.9E-80 T 13-10-2018 Theam_0546 b039d874a237a05244ac8d740709cb37 151 Gene3D G3DSA:3.10.490.10 1 150 1.2E-41 T 13-10-2018 Theam_0546 b039d874a237a05244ac8d740709cb37 151 SUPERFAMILY SSF110857 1 126 6.41E-21 T 13-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily Theam_0546 b039d874a237a05244ac8d740709cb37 151 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 109 8.5E-17 T 13-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like Theam_1717 4a7014283656ba10d4e58be22b43ec8a 263 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 5 237 1.7E-75 T 13-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 Theam_1717 4a7014283656ba10d4e58be22b43ec8a 263 Pfam PF01728 FtsJ-like methyltransferase 60 242 3.4E-22 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Theam_1717 4a7014283656ba10d4e58be22b43ec8a 263 Gene3D G3DSA:3.40.50.150 63 263 4.4E-81 T 13-10-2018 Theam_1717 4a7014283656ba10d4e58be22b43ec8a 263 SUPERFAMILY SSF55174 3 68 1.24E-15 T 13-10-2018 Theam_1717 4a7014283656ba10d4e58be22b43ec8a 263 Pfam PF01479 S4 domain 4 48 2.3E-13 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_1717 4a7014283656ba10d4e58be22b43ec8a 263 SMART SM00363 4 69 2.8E-14 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_1717 4a7014283656ba10d4e58be22b43ec8a 263 Gene3D G3DSA:3.10.290.10 1 62 1.6E-26 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Theam_1717 4a7014283656ba10d4e58be22b43ec8a 263 PIRSF PIRSF005578 1 262 2.2E-106 T 13-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 Theam_1717 4a7014283656ba10d4e58be22b43ec8a 263 SUPERFAMILY SSF53335 56 242 6.73E-30 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_0406 c25ca06715d045b3861362617e40a5fe 338 SUPERFAMILY SSF53756 2 321 2.39E-69 T 13-10-2018 Theam_0406 c25ca06715d045b3861362617e40a5fe 338 Gene3D G3DSA:3.40.50.2000 152 324 7.4E-43 T 13-10-2018 Theam_0406 c25ca06715d045b3861362617e40a5fe 338 Gene3D G3DSA:3.40.50.2000 1 145 2.8E-20 T 13-10-2018 Theam_0406 c25ca06715d045b3861362617e40a5fe 338 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 77 293 5.0E-30 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Theam_0440 46d4751948fc09f6730469f27dd84eda 202 Pfam PF13580 SIS domain 13 144 9.3E-30 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Theam_0440 46d4751948fc09f6730469f27dd84eda 202 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 187 37.285 T 13-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 Theam_0440 46d4751948fc09f6730469f27dd84eda 202 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 34 184 1.9E-63 T 13-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 Theam_0440 46d4751948fc09f6730469f27dd84eda 202 Gene3D G3DSA:3.40.50.10490 1 191 2.8E-73 T 13-10-2018 Theam_0440 46d4751948fc09f6730469f27dd84eda 202 SUPERFAMILY SSF53697 2 187 1.38E-52 T 13-10-2018 Theam_1308 68de02306fd5ae754d2c9e095a5d9b23 133 Pfam PF01894 Uncharacterised protein family UPF0047 17 130 2.0E-45 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Theam_1308 68de02306fd5ae754d2c9e095a5d9b23 133 PIRSF PIRSF004681 1 133 3.8E-47 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Theam_1308 68de02306fd5ae754d2c9e095a5d9b23 133 SUPERFAMILY SSF111038 2 133 3.27E-52 T 13-10-2018 IPR035917 YjbQ-like superfamily Theam_1308 68de02306fd5ae754d2c9e095a5d9b23 133 Gene3D G3DSA:2.60.120.460 1 133 2.5E-57 T 13-10-2018 IPR035917 YjbQ-like superfamily Theam_1308 68de02306fd5ae754d2c9e095a5d9b23 133 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 4 131 1.9E-55 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Theam_0813 ef81ef2a182a003f36dbdd1d7596a0e2 258 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 59 251 1.6E-67 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Theam_0813 ef81ef2a182a003f36dbdd1d7596a0e2 258 Gene3D G3DSA:3.90.850.10 27 255 7.1E-88 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Theam_0813 ef81ef2a182a003f36dbdd1d7596a0e2 258 Pfam PF10370 Domain of unknown function (DUF2437) 2 54 1.8E-5 T 13-10-2018 IPR018833 Domain of unknown function DUF2437 Theam_0813 ef81ef2a182a003f36dbdd1d7596a0e2 258 SUPERFAMILY SSF56529 51 256 1.44E-81 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Theam_0070 285cfff769670f2dd42e1510f618f4af 125 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 1.1E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_0070 285cfff769670f2dd42e1510f618f4af 125 Gene3D G3DSA:1.10.10.10 1 103 1.1E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0070 285cfff769670f2dd42e1510f618f4af 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 2.8E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_0070 285cfff769670f2dd42e1510f618f4af 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 2.8E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_0070 285cfff769670f2dd42e1510f618f4af 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 2.8E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_0070 285cfff769670f2dd42e1510f618f4af 125 SMART SM00418 8 93 1.9E-18 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Theam_0070 285cfff769670f2dd42e1510f618f4af 125 SUPERFAMILY SSF46785 3 76 9.12E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0756 da1c43871230348c39dd94fc9515b9dc 460 SUPERFAMILY SSF111283 3 459 2.22E-122 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Theam_0756 da1c43871230348c39dd94fc9515b9dc 460 Gene3D G3DSA:3.30.2290.10 1 216 7.3E-21 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Theam_0756 da1c43871230348c39dd94fc9515b9dc 460 Pfam PF01523 Putative modulator of DNA gyrase 24 313 3.3E-65 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Theam_0756 da1c43871230348c39dd94fc9515b9dc 460 PIRSF PIRSF004919 5 460 4.8E-140 T 13-10-2018 IPR025502 TldD Theam_1339 176cd63e807982143e4b9ff673c3bca8 191 Pfam PF08901 Protein of unknown function (DUF1847) 30 165 6.5E-56 T 13-10-2018 IPR014997 Protein of unknown function DUF1847 Theam_1018 6d54dd77b5008ac822c799a64f8a039e 220 Pfam PF01881 CRISPR associated protein Cas6 82 216 3.4E-29 T 13-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Theam_1018 6d54dd77b5008ac822c799a64f8a039e 220 Gene3D G3DSA:3.30.70.1900 105 219 9.2E-24 T 13-10-2018 Theam_1018 6d54dd77b5008ac822c799a64f8a039e 220 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 39 216 2.6E-28 T 13-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Theam_1018 6d54dd77b5008ac822c799a64f8a039e 220 PIRSF PIRSF005054 1 219 1.6E-40 T 13-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Theam_0164 efabf436e171b2f82598d2d93e29168f 429 SUPERFAMILY SSF81340 7 405 1.27E-56 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Theam_0164 efabf436e171b2f82598d2d93e29168f 429 PRINTS PR00762 Chloride channel signature 356 372 5.8E-23 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_0164 efabf436e171b2f82598d2d93e29168f 429 PRINTS PR00762 Chloride channel signature 374 393 5.8E-23 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_0164 efabf436e171b2f82598d2d93e29168f 429 PRINTS PR00762 Chloride channel signature 152 171 5.8E-23 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_0164 efabf436e171b2f82598d2d93e29168f 429 PRINTS PR00762 Chloride channel signature 323 343 5.8E-23 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_0164 efabf436e171b2f82598d2d93e29168f 429 PRINTS PR00762 Chloride channel signature 101 120 5.8E-23 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_0164 efabf436e171b2f82598d2d93e29168f 429 Gene3D G3DSA:1.10.3080.10 4 426 5.6E-59 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Theam_0164 efabf436e171b2f82598d2d93e29168f 429 Pfam PF00654 Voltage gated chloride channel 62 400 2.0E-48 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Theam_1296 0edfb5e32ab8b5f699977f8344da313e 239 Pfam PF00753 Metallo-beta-lactamase superfamily 22 93 1.8E-13 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_1296 0edfb5e32ab8b5f699977f8344da313e 239 Gene3D G3DSA:3.60.15.10 2 104 5.7E-26 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_1296 0edfb5e32ab8b5f699977f8344da313e 239 SMART SM00849 20 207 2.4E-4 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_1296 0edfb5e32ab8b5f699977f8344da313e 239 SUPERFAMILY SSF56281 4 231 5.2E-25 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_1296 0edfb5e32ab8b5f699977f8344da313e 239 Gene3D G3DSA:3.60.15.10 126 237 2.4E-27 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_1725 5e82fd6208116cea9e0b49f292bab0e6 259 Gene3D G3DSA:3.20.20.70 1 259 3.0E-105 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1725 5e82fd6208116cea9e0b49f292bab0e6 259 Pfam PF00218 Indole-3-glycerol phosphate synthase 4 254 5.6E-91 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Theam_1725 5e82fd6208116cea9e0b49f292bab0e6 259 SUPERFAMILY SSF51366 11 255 1.88E-85 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Theam_1725 5e82fd6208116cea9e0b49f292bab0e6 259 Hamap MF_00134_A Indole-3-glycerol phosphate synthase [trpC]. 33 254 30.784 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Theam_1725 5e82fd6208116cea9e0b49f292bab0e6 259 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 2 258 36.839 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Theam_1725 5e82fd6208116cea9e0b49f292bab0e6 259 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 51 69 - T 13-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Theam_0189 9725f97ac6fc9ad3323e0d64abe4f614 235 Gene3D G3DSA:3.20.20.70 1 235 1.1E-84 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0189 9725f97ac6fc9ad3323e0d64abe4f614 235 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 4 229 1.8E-49 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Theam_0189 9725f97ac6fc9ad3323e0d64abe4f614 235 SUPERFAMILY SSF51366 2 232 3.77E-69 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Theam_0189 9725f97ac6fc9ad3323e0d64abe4f614 235 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 234 37.489 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Theam_0189 9725f97ac6fc9ad3323e0d64abe4f614 235 SMART SM00934 4 229 7.4E-87 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Theam_0189 9725f97ac6fc9ad3323e0d64abe4f614 235 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 5 229 1.1E-62 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Theam_0189 9725f97ac6fc9ad3323e0d64abe4f614 235 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 13-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Theam_0443 dbbbd04748debfb650a146886a1d08cf 389 Gene3D G3DSA:1.20.1530.20 2 386 6.1E-63 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily Theam_0443 dbbbd04748debfb650a146886a1d08cf 389 Pfam PF00999 Sodium/hydrogen exchanger family 8 379 1.4E-52 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Theam_1679 fa423434df5462bc5971eab383402bf3 365 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 196 210 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Theam_1679 fa423434df5462bc5971eab383402bf3 365 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 349 1.7E-138 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Theam_1679 fa423434df5462bc5971eab383402bf3 365 Pfam PF00437 Type II/IV secretion system protein 76 272 1.8E-42 T 13-10-2018 IPR001482 Type II/IV secretion system protein Theam_1679 fa423434df5462bc5971eab383402bf3 365 Gene3D G3DSA:3.40.50.300 103 360 4.7E-93 T 13-10-2018 Theam_1679 fa423434df5462bc5971eab383402bf3 365 Gene3D G3DSA:3.30.450.90 2 102 6.6E-32 T 13-10-2018 Theam_1679 fa423434df5462bc5971eab383402bf3 365 SMART SM00382 125 250 4.4E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1679 fa423434df5462bc5971eab383402bf3 365 SUPERFAMILY SSF52540 7 343 3.35E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0895 7f633099c4ec567f86dce00415c02919 274 Pfam PF13180 PDZ domain 201 269 8.6E-10 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Theam_0895 7f633099c4ec567f86dce00415c02919 274 Gene3D G3DSA:2.30.42.10 173 271 3.4E-20 T 13-10-2018 Theam_0895 7f633099c4ec567f86dce00415c02919 274 SMART SM00228 192 264 6.2E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Theam_0895 7f633099c4ec567f86dce00415c02919 274 SUPERFAMILY SSF50156 198 272 2.23E-16 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Theam_0579 d6af0b4f57302b68b28d0d0dc5dd1824 331 SUPERFAMILY SSF51735 2 317 1.3E-104 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0579 d6af0b4f57302b68b28d0d0dc5dd1824 331 Gene3D G3DSA:3.40.50.720 2 300 1.7E-123 T 13-10-2018 Theam_0579 d6af0b4f57302b68b28d0d0dc5dd1824 331 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 313 5.1E-132 T 13-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Theam_0579 d6af0b4f57302b68b28d0d0dc5dd1824 331 Gene3D G3DSA:3.90.25.10 187 308 1.7E-123 T 13-10-2018 Theam_0579 d6af0b4f57302b68b28d0d0dc5dd1824 331 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 301 7.3E-86 T 13-10-2018 IPR016040 NAD(P)-binding domain Theam_1017 af24eb7fd209c373494403f8a707a243 440 ProSitePatterns PS00163 Fumarate lyases signature. 269 278 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Theam_1017 af24eb7fd209c373494403f8a707a243 440 SUPERFAMILY SSF48557 3 438 1.34E-142 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 Theam_1017 af24eb7fd209c373494403f8a707a243 440 Pfam PF10397 Adenylosuccinate lyase C-terminus 358 437 4.9E-30 T 13-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Theam_1017 af24eb7fd209c373494403f8a707a243 440 Gene3D G3DSA:1.10.40.30 357 437 8.3E-35 T 13-10-2018 Theam_1017 af24eb7fd209c373494403f8a707a243 440 Gene3D G3DSA:1.20.200.10 101 355 1.4E-97 T 13-10-2018 Theam_1017 af24eb7fd209c373494403f8a707a243 440 Gene3D G3DSA:1.10.275.10 1 100 2.2E-32 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal Theam_1017 af24eb7fd209c373494403f8a707a243 440 PRINTS PR00149 Fumarate lyase superfamily signature 96 114 5.7E-29 T 13-10-2018 IPR000362 Fumarate lyase family Theam_1017 af24eb7fd209c373494403f8a707a243 440 PRINTS PR00149 Fumarate lyase superfamily signature 141 159 5.7E-29 T 13-10-2018 IPR000362 Fumarate lyase family Theam_1017 af24eb7fd209c373494403f8a707a243 440 PRINTS PR00149 Fumarate lyase superfamily signature 224 251 5.7E-29 T 13-10-2018 IPR000362 Fumarate lyase family Theam_1017 af24eb7fd209c373494403f8a707a243 440 PRINTS PR00149 Fumarate lyase superfamily signature 269 285 5.7E-29 T 13-10-2018 IPR000362 Fumarate lyase family Theam_1017 af24eb7fd209c373494403f8a707a243 440 PRINTS PR00145 Argininosuccinate lyase family signature 95 117 3.4E-13 T 13-10-2018 Theam_1017 af24eb7fd209c373494403f8a707a243 440 PRINTS PR00145 Argininosuccinate lyase family signature 224 248 3.4E-13 T 13-10-2018 Theam_1017 af24eb7fd209c373494403f8a707a243 440 PRINTS PR00145 Argininosuccinate lyase family signature 269 285 3.4E-13 T 13-10-2018 Theam_1017 af24eb7fd209c373494403f8a707a243 440 PRINTS PR00145 Argininosuccinate lyase family signature 136 156 3.4E-13 T 13-10-2018 Theam_1017 af24eb7fd209c373494403f8a707a243 440 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 438 1.3E-168 T 13-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Theam_1017 af24eb7fd209c373494403f8a707a243 440 SMART SM00998 357 438 6.7E-45 T 13-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Theam_1017 af24eb7fd209c373494403f8a707a243 440 Pfam PF00206 Lyase 8 292 2.4E-64 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal Theam_0485 a9025412f0cdafbf687c3872c0d58114 257 Gene3D G3DSA:3.40.50.700 1 166 4.9E-45 T 13-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Theam_0485 a9025412f0cdafbf687c3872c0d58114 257 SUPERFAMILY SSF56770 4 215 1.57E-42 T 13-10-2018 Theam_0485 a9025412f0cdafbf687c3872c0d58114 257 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 12 149 2.6E-28 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0815 fc0986939e7c1c3a89037f905df75263 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.4E-33 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Theam_0815 fc0986939e7c1c3a89037f905df75263 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.4E-33 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Theam_0815 fc0986939e7c1c3a89037f905df75263 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.4E-33 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Theam_0815 fc0986939e7c1c3a89037f905df75263 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.4E-33 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Theam_0815 fc0986939e7c1c3a89037f905df75263 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.4E-33 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Theam_0815 fc0986939e7c1c3a89037f905df75263 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 33.11 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Theam_0815 fc0986939e7c1c3a89037f905df75263 142 SMART SM00562 3 140 1.4E-81 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Theam_0815 fc0986939e7c1c3a89037f905df75263 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.6E-55 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Theam_0815 fc0986939e7c1c3a89037f905df75263 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 13-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Theam_0815 fc0986939e7c1c3a89037f905df75263 142 SUPERFAMILY SSF54919 1 140 9.82E-60 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Theam_0815 fc0986939e7c1c3a89037f905df75263 142 Gene3D G3DSA:3.30.70.141 1 142 9.4E-60 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Theam_0572 0f7a5ab4916f4c1efe07fcfb4329ad6b 225 Gene3D G3DSA:1.25.40.10 85 225 2.9E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0572 0f7a5ab4916f4c1efe07fcfb4329ad6b 225 SUPERFAMILY SSF48452 74 207 2.43E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0982 f835fad1052d9d9b8737c21ebdff96fe 524 Pfam PF09210 Domain of unknown function (DUF1957) 439 519 3.0E-29 T 13-10-2018 IPR015293 Domain of unknown function DUF1957 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Theam_0982 f835fad1052d9d9b8737c21ebdff96fe 524 Gene3D G3DSA:1.20.1430.10 417 522 2.3E-32 T 13-10-2018 IPR037090 Glycoside hydrolase families 57, central domain KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Theam_0982 f835fad1052d9d9b8737c21ebdff96fe 524 SUPERFAMILY SSF88713 2 413 1.94E-109 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Theam_0982 f835fad1052d9d9b8737c21ebdff96fe 524 SUPERFAMILY SSF88688 418 519 9.16E-28 T 13-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily Theam_0982 f835fad1052d9d9b8737c21ebdff96fe 524 Gene3D G3DSA:3.20.110.10 1 406 1.6E-156 T 13-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily Theam_0982 f835fad1052d9d9b8737c21ebdff96fe 524 Pfam PF03065 Glycosyl hydrolase family 57 8 362 3.6E-46 T 13-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 Theam_1016 c1717211ff507b1b2138a40e95a3ffc5 458 SUPERFAMILY SSF51905 1 454 2.53E-59 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_1016 c1717211ff507b1b2138a40e95a3ffc5 458 Gene3D G3DSA:3.90.660.20 38 405 3.0E-145 T 13-10-2018 Theam_1016 c1717211ff507b1b2138a40e95a3ffc5 458 SUPERFAMILY SSF54373 297 404 4.61E-31 T 13-10-2018 Theam_1016 c1717211ff507b1b2138a40e95a3ffc5 458 Gene3D G3DSA:1.10.3110.10 97 195 3.0E-145 T 13-10-2018 Theam_1016 c1717211ff507b1b2138a40e95a3ffc5 458 Pfam PF01593 Flavin containing amine oxidoreductase 10 454 2.3E-61 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Theam_1016 c1717211ff507b1b2138a40e95a3ffc5 458 PRINTS PR00419 Adrenodoxin reductase family signature 2 24 6.7E-5 T 13-10-2018 Theam_1016 c1717211ff507b1b2138a40e95a3ffc5 458 PRINTS PR00419 Adrenodoxin reductase family signature 25 38 6.7E-5 T 13-10-2018 Theam_1016 c1717211ff507b1b2138a40e95a3ffc5 458 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 2 455 3.3E-102 T 13-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Theam_1016 c1717211ff507b1b2138a40e95a3ffc5 458 Gene3D G3DSA:3.50.50.60 3 448 3.0E-145 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0578 fa4e15d2e1b5a53917748675cdc78f72 187 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 6 179 1.2E-69 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Theam_0578 fa4e15d2e1b5a53917748675cdc78f72 187 Gene3D G3DSA:2.60.120.10 5 186 4.0E-72 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Theam_0578 fa4e15d2e1b5a53917748675cdc78f72 187 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 3 177 2.0E-53 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Theam_0578 fa4e15d2e1b5a53917748675cdc78f72 187 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 8 176 3.6E-69 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Theam_0578 fa4e15d2e1b5a53917748675cdc78f72 187 SUPERFAMILY SSF51182 4 184 2.36E-73 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Theam_0280 39221ee64f3c0b1a28932b6986db83bd 85 Gene3D G3DSA:2.40.50.140 15 84 7.8E-36 T 13-10-2018 Theam_0280 39221ee64f3c0b1a28932b6986db83bd 85 SMART SM00316 17 85 6.2E-7 T 13-10-2018 IPR022967 RNA-binding domain, S1 Theam_0280 39221ee64f3c0b1a28932b6986db83bd 85 SUPERFAMILY SSF50249 14 83 2.08E-27 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Theam_0280 39221ee64f3c0b1a28932b6986db83bd 85 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 16 84 3.1E-36 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Theam_0280 39221ee64f3c0b1a28932b6986db83bd 85 Pfam PF01176 Translation initiation factor 1A / IF-1 20 83 1.2E-29 T 13-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Theam_0280 39221ee64f3c0b1a28932b6986db83bd 85 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 14 85 27.063 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Theam_0110 a1c8d96028a744f3b97322b88b9fec37 381 Pfam PF03477 ATP cone domain 93 165 3.9E-5 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Theam_0110 a1c8d96028a744f3b97322b88b9fec37 381 Pfam PF03477 ATP cone domain 6 75 2.4E-5 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Theam_0110 a1c8d96028a744f3b97322b88b9fec37 381 Gene3D G3DSA:3.40.50.300 173 376 9.0E-12 T 13-10-2018 Theam_0110 a1c8d96028a744f3b97322b88b9fec37 381 SUPERFAMILY SSF52540 174 370 6.54E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1514 cc797187688d88f4787e4c2bf178859f 184 Pfam PF04612 Type II secretion system (T2SS), protein M 10 177 2.2E-14 T 13-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 Theam_0965 2f70ce9a7788a2f4b07fd3739c50e2ce 1174 SUPERFAMILY SSF48695 34 623 8.94E-16 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_0965 2f70ce9a7788a2f4b07fd3739c50e2ce 1174 Gene3D G3DSA:2.60.220.30 989 1134 9.7E-7 T 13-10-2018 Theam_0965 2f70ce9a7788a2f4b07fd3739c50e2ce 1174 Gene3D G3DSA:1.10.1130.10 504 620 1.8E-9 T 13-10-2018 Theam_1418 752744ce4801ce1568c4c44e197ff359 449 Pfam PF00202 Aminotransferase class-III 25 443 1.9E-114 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Theam_1418 752744ce4801ce1568c4c44e197ff359 449 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 443 1.1E-160 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Theam_1418 752744ce4801ce1568c4c44e197ff359 449 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 446 50.431 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Theam_1418 752744ce4801ce1568c4c44e197ff359 449 Gene3D G3DSA:3.40.640.10 64 340 1.6E-167 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Theam_1418 752744ce4801ce1568c4c44e197ff359 449 SUPERFAMILY SSF53383 9 443 1.16E-132 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Theam_1418 752744ce4801ce1568c4c44e197ff359 449 PIRSF PIRSF000521 19 446 3.8E-34 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Theam_1418 752744ce4801ce1568c4c44e197ff359 449 Gene3D G3DSA:3.90.1150.10 10 443 1.6E-167 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Theam_1461 e0057fe214bddb83434517b1b0471bde 363 Pfam PF02119 Flagellar P-ring protein 23 362 1.0E-126 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Theam_1461 e0057fe214bddb83434517b1b0471bde 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 363 33.249 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Theam_1461 e0057fe214bddb83434517b1b0471bde 363 PRINTS PR01010 Flagellar P-ring protein signature 57 72 2.0E-68 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Theam_1461 e0057fe214bddb83434517b1b0471bde 363 PRINTS PR01010 Flagellar P-ring protein signature 188 206 2.0E-68 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Theam_1461 e0057fe214bddb83434517b1b0471bde 363 PRINTS PR01010 Flagellar P-ring protein signature 104 121 2.0E-68 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Theam_1461 e0057fe214bddb83434517b1b0471bde 363 PRINTS PR01010 Flagellar P-ring protein signature 23 38 2.0E-68 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Theam_1461 e0057fe214bddb83434517b1b0471bde 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 2.0E-68 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Theam_1461 e0057fe214bddb83434517b1b0471bde 363 PRINTS PR01010 Flagellar P-ring protein signature 162 180 2.0E-68 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Theam_1461 e0057fe214bddb83434517b1b0471bde 363 PRINTS PR01010 Flagellar P-ring protein signature 82 101 2.0E-68 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Theam_1461 e0057fe214bddb83434517b1b0471bde 363 PRINTS PR01010 Flagellar P-ring protein signature 38 53 2.0E-68 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Theam_1461 e0057fe214bddb83434517b1b0471bde 363 PRINTS PR01010 Flagellar P-ring protein signature 121 139 2.0E-68 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Theam_0946 f4b49979148da4eca7a5bea6f5cf5daa 1307 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1053 1304 7.5E-20 T 13-10-2018 IPR007452 Translocation and assembly module TamB Theam_0689 af163107ef2bd5ddbfd28ed202321cd9 270 Pfam PF00950 ABC 3 transport family 13 267 4.2E-62 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Theam_0689 af163107ef2bd5ddbfd28ed202321cd9 270 Gene3D G3DSA:1.10.3470.10 14 270 4.2E-8 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Theam_0689 af163107ef2bd5ddbfd28ed202321cd9 270 SUPERFAMILY SSF81345 7 264 3.01E-36 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Theam_0558 2c31328768c4fa058af5c5f38612212e 369 Pfam PF00155 Aminotransferase class I and II 27 364 4.2E-52 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Theam_0558 2c31328768c4fa058af5c5f38612212e 369 SUPERFAMILY SSF53383 5 368 1.17E-91 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Theam_0558 2c31328768c4fa058af5c5f38612212e 369 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 214 227 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Theam_0558 2c31328768c4fa058af5c5f38612212e 369 Gene3D G3DSA:3.40.640.10 1 369 4.0E-113 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Theam_0008 774a81fcb1878574b617428fbba8a806 173 Gene3D G3DSA:1.20.120.1760 1 170 5.3E-12 T 13-10-2018 Theam_0008 774a81fcb1878574b617428fbba8a806 173 Pfam PF01066 CDP-alcohol phosphatidyltransferase 7 70 9.0E-15 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Theam_0008 774a81fcb1878574b617428fbba8a806 173 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Theam_0008 774a81fcb1878574b617428fbba8a806 173 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 6 170 3.6E-37 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Theam_0008 774a81fcb1878574b617428fbba8a806 173 PIRSF PIRSF000847 2 173 1.2E-42 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Theam_0845 ee7974e218ce4f5e328eb8dde8680368 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 292 458 4.4E-39 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Theam_0845 ee7974e218ce4f5e328eb8dde8680368 628 Gene3D G3DSA:3.30.450.20 74 198 3.2E-19 T 13-10-2018 Theam_0845 ee7974e218ce4f5e328eb8dde8680368 628 Gene3D G3DSA:1.10.287.950 199 491 2.2E-54 T 13-10-2018 Theam_0845 ee7974e218ce4f5e328eb8dde8680368 628 SMART SM00283 227 488 1.9E-42 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Theam_0845 ee7974e218ce4f5e328eb8dde8680368 628 SUPERFAMILY SSF58104 219 487 5.36E-55 T 13-10-2018 Theam_0845 ee7974e218ce4f5e328eb8dde8680368 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 355 1.4E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Theam_0845 ee7974e218ce4f5e328eb8dde8680368 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 247 276 1.4E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Theam_0845 ee7974e218ce4f5e328eb8dde8680368 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 386 1.4E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Theam_0528 5844166cc7ed8278782677f4e4ac9b0c 85 Gene3D G3DSA:3.40.30.10 1 85 1.0E-8 T 13-10-2018 Theam_0528 5844166cc7ed8278782677f4e4ac9b0c 85 SUPERFAMILY SSF52833 3 83 5.53E-11 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Theam_0379 2466e028d68c825be3c43fd3aad2d37b 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 30.353 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Theam_0379 2466e028d68c825be3c43fd3aad2d37b 142 Pfam PF00572 Ribosomal protein L13 14 138 1.2E-60 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Theam_0379 2466e028d68c825be3c43fd3aad2d37b 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 3 141 4.0E-64 T 13-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0379 2466e028d68c825be3c43fd3aad2d37b 142 PIRSF PIRSF002181 1 141 1.1E-55 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Theam_0379 2466e028d68c825be3c43fd3aad2d37b 142 SUPERFAMILY SSF52161 1 139 6.67E-61 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Theam_0379 2466e028d68c825be3c43fd3aad2d37b 142 Gene3D G3DSA:3.90.1180.10 1 142 2.5E-69 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Theam_1280 fe18a3e1c8c873e265cc9feeec4e2ac9 183 SUPERFAMILY SSF55144 4 182 1.17E-34 T 13-10-2018 IPR009097 Cyclic phosphodiesterase Theam_1280 fe18a3e1c8c873e265cc9feeec4e2ac9 183 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 4 182 1.3E-35 T 13-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Theam_1280 fe18a3e1c8c873e265cc9feeec4e2ac9 183 Gene3D G3DSA:3.90.1140.10 4 183 3.0E-44 T 13-10-2018 Theam_1280 fe18a3e1c8c873e265cc9feeec4e2ac9 183 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 3 182 22.629 T 13-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Theam_1280 fe18a3e1c8c873e265cc9feeec4e2ac9 183 Pfam PF02834 LigT like Phosphoesterase 15 92 8.9E-15 T 13-10-2018 IPR014051 Phosphoesterase, HXTX Theam_1280 fe18a3e1c8c873e265cc9feeec4e2ac9 183 Pfam PF02834 LigT like Phosphoesterase 98 174 3.2E-8 T 13-10-2018 IPR014051 Phosphoesterase, HXTX Theam_0263 e54c237822e5033f0ce4b0aaf4a53ab3 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 210 7.5E-91 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Theam_0263 e54c237822e5033f0ce4b0aaf4a53ab3 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 121 203 5.2E-40 T 13-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0263 e54c237822e5033f0ce4b0aaf4a53ab3 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 207 38.605 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Theam_0263 e54c237822e5033f0ce4b0aaf4a53ab3 232 Gene3D G3DSA:3.30.1140.32 109 209 6.6E-44 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0263 e54c237822e5033f0ce4b0aaf4a53ab3 232 SUPERFAMILY SSF54821 108 207 9.55E-41 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0263 e54c237822e5033f0ce4b0aaf4a53ab3 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 164 198 - T 13-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0263 e54c237822e5033f0ce4b0aaf4a53ab3 232 SUPERFAMILY SSF54814 2 107 1.67E-35 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Theam_0263 e54c237822e5033f0ce4b0aaf4a53ab3 232 Gene3D G3DSA:3.30.300.20 17 108 2.1E-27 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Theam_0263 e54c237822e5033f0ce4b0aaf4a53ab3 232 Pfam PF07650 KH domain 39 111 3.3E-14 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Theam_0436 2ee0fc6d054c53ccf0abb2b1b064a7a3 264 Gene3D G3DSA:3.20.20.70 1 261 1.1E-93 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0436 2ee0fc6d054c53ccf0abb2b1b064a7a3 264 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 256 4.7E-79 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Theam_0436 2ee0fc6d054c53ccf0abb2b1b064a7a3 264 Pfam PF00290 Tryptophan synthase alpha chain 8 244 5.4E-80 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Theam_0436 2ee0fc6d054c53ccf0abb2b1b064a7a3 264 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 47 60 - T 13-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Theam_0436 2ee0fc6d054c53ccf0abb2b1b064a7a3 264 SUPERFAMILY SSF51366 1 255 6.4E-80 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Theam_0436 2ee0fc6d054c53ccf0abb2b1b064a7a3 264 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 258 34.203 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Theam_0905 f6295bd36c34be6aa4cdb8b296f353e8 283 SUPERFAMILY SSF55120 4 228 4.32E-78 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0905 f6295bd36c34be6aa4cdb8b296f353e8 283 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 4 212 1.5E-72 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0905 f6295bd36c34be6aa4cdb8b296f353e8 283 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 174 228 4.1E-14 T 13-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Theam_0905 f6295bd36c34be6aa4cdb8b296f353e8 283 Gene3D G3DSA:3.30.2350.10 1 228 1.8E-88 T 13-10-2018 Theam_0905 f6295bd36c34be6aa4cdb8b296f353e8 283 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 30 173 8.6E-54 T 13-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Theam_0905 f6295bd36c34be6aa4cdb8b296f353e8 283 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 3 283 18.7 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0905 f6295bd36c34be6aa4cdb8b296f353e8 283 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 231 282 6.7E-7 T 13-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0601 594f90b14416ada983380ca3c77ab8e9 437 PIRSF PIRSF000124 15 433 1.1E-56 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Theam_0601 594f90b14416ada983380ca3c77ab8e9 437 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 16 190 1.8E-32 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Theam_0601 594f90b14416ada983380ca3c77ab8e9 437 SUPERFAMILY SSF52413 310 431 6.28E-27 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Theam_0601 594f90b14416ada983380ca3c77ab8e9 437 Gene3D G3DSA:3.40.50.720 7 203 2.7E-60 T 13-10-2018 Theam_0601 594f90b14416ada983380ca3c77ab8e9 437 Gene3D G3DSA:3.40.50.720 208 434 1.5E-58 T 13-10-2018 Theam_0601 594f90b14416ada983380ca3c77ab8e9 437 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 209 298 2.5E-24 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Theam_0601 594f90b14416ada983380ca3c77ab8e9 437 SUPERFAMILY SSF51735 16 200 2.57E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0601 594f90b14416ada983380ca3c77ab8e9 437 PIRSF PIRSF500136 6 436 2.7E-148 T 13-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 Theam_0601 594f90b14416ada983380ca3c77ab8e9 437 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 16 420 1.7E-120 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Theam_0601 594f90b14416ada983380ca3c77ab8e9 437 SUPERFAMILY SSF48179 209 300 6.63E-25 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Theam_0601 594f90b14416ada983380ca3c77ab8e9 437 SMART SM00984 325 426 1.9E-30 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Theam_0601 594f90b14416ada983380ca3c77ab8e9 437 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 425 2.4E-21 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Theam_1573 ddd7797a261b9fa9efbca7550010a6ab 175 Pfam PF13242 HAD-hyrolase-like 99 143 1.9E-7 T 13-10-2018 Theam_1573 ddd7797a261b9fa9efbca7550010a6ab 175 PIRSF PIRSF004682 1 157 6.3E-52 T 13-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 Theam_1573 ddd7797a261b9fa9efbca7550010a6ab 175 Gene3D G3DSA:3.40.50.1000 1 157 1.6E-53 T 13-10-2018 IPR023214 HAD superfamily Theam_1573 ddd7797a261b9fa9efbca7550010a6ab 175 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 141 4.3E-42 T 13-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 Theam_1573 ddd7797a261b9fa9efbca7550010a6ab 175 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 143 9.1E-32 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Theam_1573 ddd7797a261b9fa9efbca7550010a6ab 175 SUPERFAMILY SSF56784 3 146 1.16E-43 T 13-10-2018 IPR036412 HAD-like superfamily Theam_0275 67656b879a1f758bdfdb319c5bd2ffa6 61 PIRSF PIRSF002211 1 60 1.6E-24 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0275 67656b879a1f758bdfdb319c5bd2ffa6 61 SUPERFAMILY SSF55129 1 59 1.18E-16 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Theam_0275 67656b879a1f758bdfdb319c5bd2ffa6 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 57 1.2E-22 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0275 67656b879a1f758bdfdb319c5bd2ffa6 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 16.383 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0275 67656b879a1f758bdfdb319c5bd2ffa6 61 Gene3D G3DSA:3.30.1390.20 1 60 1.3E-23 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Theam_0275 67656b879a1f758bdfdb319c5bd2ffa6 61 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 2.9E-17 T 13-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Theam_0058 e07d924dd9ac2dc0466c33168711c5bd 419 Pfam PF17289 Terminase RNaseH-like domain 252 400 5.7E-15 T 13-10-2018 IPR035421 Terminase, large subunit gp17-like Theam_0058 e07d924dd9ac2dc0466c33168711c5bd 419 Pfam PF03237 Terminase-like family 25 228 2.7E-16 T 13-10-2018 IPR004921 Terminase large subunit, T4likevirus-type Theam_0058 e07d924dd9ac2dc0466c33168711c5bd 419 Gene3D G3DSA:3.40.50.300 2 177 7.9E-45 T 13-10-2018 Theam_0058 e07d924dd9ac2dc0466c33168711c5bd 419 SUPERFAMILY SSF52540 3 160 2.23E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0058 e07d924dd9ac2dc0466c33168711c5bd 419 Gene3D G3DSA:3.30.420.240 217 403 2.0E-28 T 13-10-2018 Theam_0872 dd31c097bc91c66f5adde2626158b60b 812 Gene3D G3DSA:3.30.70.2230 515 678 2.3E-32 T 13-10-2018 Theam_0872 dd31c097bc91c66f5adde2626158b60b 812 TIGRFAM TIGR02578 cas_TM1811_Csm1: CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE 219 671 4.3E-78 T 13-10-2018 IPR013408 CRISPR-associated protein Csm1 Theam_0389 ca1cf9a20f016259c852fd6f3d9b8b2e 244 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 242 6.1E-100 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Theam_0389 ca1cf9a20f016259c852fd6f3d9b8b2e 244 SUPERFAMILY SSF63892 4 243 1.57E-94 T 13-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Theam_0389 ca1cf9a20f016259c852fd6f3d9b8b2e 244 Gene3D G3DSA:3.20.20.70 1 244 3.0E-102 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0389 ca1cf9a20f016259c852fd6f3d9b8b2e 244 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 244 116.57 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Theam_0389 ca1cf9a20f016259c852fd6f3d9b8b2e 244 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 242 2.1E-101 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Theam_1388 bd1df791d93ea4ffcc2b3dc572c8b214 261 Pfam PF02698 DUF218 domain 80 217 3.1E-30 T 13-10-2018 IPR003848 Domain of unknown function DUF218 Theam_1027 b76f4dc3f34ff4fa46e01978a402a92b 340 Pfam PF08376 Nitrate and nitrite sensing 56 296 1.5E-51 T 13-10-2018 IPR013587 Nitrate/nitrite sensing protein Theam_1133 054f961454807cbb2720aa9ec991ebdf 398 Gene3D G3DSA:3.40.50.360 250 397 5.8E-26 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Theam_1133 054f961454807cbb2720aa9ec991ebdf 398 Gene3D G3DSA:3.60.15.10 1 244 6.6E-86 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_1133 054f961454807cbb2720aa9ec991ebdf 398 PIRSF PIRSF005243 1 397 3.0E-126 T 13-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 Theam_1133 054f961454807cbb2720aa9ec991ebdf 398 SUPERFAMILY SSF56281 3 278 1.83E-47 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Theam_1133 054f961454807cbb2720aa9ec991ebdf 398 Pfam PF00753 Metallo-beta-lactamase superfamily 34 170 1.0E-9 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_1133 054f961454807cbb2720aa9ec991ebdf 398 SUPERFAMILY SSF52218 249 393 7.09E-28 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Theam_1133 054f961454807cbb2720aa9ec991ebdf 398 SMART SM00849 34 225 4.8E-31 T 13-10-2018 IPR001279 Metallo-beta-lactamase Theam_0344 321f6f4675caebdbee7a9b9b67066fdd 420 TIGRFAM TIGR01894 cas_TM1795_cmr1: CRISPR type III-B/RAMP module RAMP protein Cmr1 10 211 1.5E-10 T 13-10-2018 IPR007522 CRISPR-associated protein TM1795 Theam_0344 321f6f4675caebdbee7a9b9b67066fdd 420 Pfam PF03787 RAMP superfamily 8 210 8.2E-15 T 13-10-2018 IPR005537 CRISPR type III-associated RAMP protein Theam_0343 99535947a97c86b8367601aa7cbc182b 387 Pfam PF03787 RAMP superfamily 101 357 8.2E-7 T 13-10-2018 IPR005537 CRISPR type III-associated RAMP protein Theam_0151 3a5951bbea31cdeccd6666595badcc47 322 PIRSF PIRSF005052 2 290 1.5E-94 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 Theam_0151 3a5951bbea31cdeccd6666595badcc47 322 Pfam PF03668 P-loop ATPase protein family 3 274 1.2E-79 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 Theam_0151 3a5951bbea31cdeccd6666595badcc47 322 Gene3D G3DSA:3.40.50.300 1 161 1.1E-6 T 13-10-2018 Theam_0151 3a5951bbea31cdeccd6666595badcc47 322 SUPERFAMILY SSF52540 3 157 3.44E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0151 3a5951bbea31cdeccd6666595badcc47 322 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 2 287 37.562 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 Theam_0422 39b511d100cff56d4e105b0ccefc8190 138 SUPERFAMILY SSF48695 31 120 2.22E-14 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_0422 39b511d100cff56d4e105b0ccefc8190 138 Gene3D G3DSA:3.90.10.10 51 117 2.1E-5 T 13-10-2018 Theam_1046 936d122fa98569c2c5232e0c9358b264 95 SUPERFAMILY SSF101386 6 94 9.72E-27 T 13-10-2018 Theam_1046 936d122fa98569c2c5232e0c9358b264 95 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 8 93 1.3E-21 T 13-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Theam_1046 936d122fa98569c2c5232e0c9358b264 95 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 4 90 22.452 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Theam_1046 936d122fa98569c2c5232e0c9358b264 95 Gene3D G3DSA:1.10.287.1080 3 95 3.9E-34 T 13-10-2018 Theam_1046 936d122fa98569c2c5232e0c9358b264 95 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 7 90 1.3E-33 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Theam_0391 ffad9823af45f9c9544ec11f79d0f8e3 145 SUPERFAMILY SSF47188 5 132 5.62E-20 T 13-10-2018 IPR035938 Hemerythrin-like superfamily Theam_0391 ffad9823af45f9c9544ec11f79d0f8e3 145 Pfam PF01814 Hemerythrin HHE cation binding domain 13 126 3.9E-9 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Theam_0391 ffad9823af45f9c9544ec11f79d0f8e3 145 Gene3D G3DSA:1.20.120.50 11 133 1.8E-18 T 13-10-2018 IPR035938 Hemerythrin-like superfamily Theam_0391 ffad9823af45f9c9544ec11f79d0f8e3 145 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 15 131 5.3E-18 T 13-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 Theam_0391 ffad9823af45f9c9544ec11f79d0f8e3 145 ProSitePatterns PS00550 Hemerythrin family signature. 59 86 - T 13-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 Theam_1686 d5f6500a2a2d9a04a206911355e50fbb 323 Pfam PF00294 pfkB family carbohydrate kinase 2 291 7.4E-48 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Theam_1686 d5f6500a2a2d9a04a206911355e50fbb 323 SUPERFAMILY SSF53613 1 299 2.03E-57 T 13-10-2018 IPR029056 Ribokinase-like Theam_1686 d5f6500a2a2d9a04a206911355e50fbb 323 PRINTS PR00990 Ribokinase signature 213 224 1.6E-15 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Theam_1686 d5f6500a2a2d9a04a206911355e50fbb 323 PRINTS PR00990 Ribokinase signature 177 192 1.6E-15 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Theam_1686 d5f6500a2a2d9a04a206911355e50fbb 323 PRINTS PR00990 Ribokinase signature 33 52 1.6E-15 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Theam_1686 d5f6500a2a2d9a04a206911355e50fbb 323 PRINTS PR00990 Ribokinase signature 6 27 1.6E-15 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Theam_1686 d5f6500a2a2d9a04a206911355e50fbb 323 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Theam_1686 d5f6500a2a2d9a04a206911355e50fbb 323 Gene3D G3DSA:3.40.1190.20 1 302 3.6E-74 T 13-10-2018 IPR029056 Ribokinase-like Theam_0211 4416dc9d68c7489f035262e38ac65824 438 SUPERFAMILY SSF51905 9 366 4.53E-18 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0211 4416dc9d68c7489f035262e38ac65824 438 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 339 362 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Theam_0211 4416dc9d68c7489f035262e38ac65824 438 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 6 436 8.7E-213 T 13-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 Theam_0211 4416dc9d68c7489f035262e38ac65824 438 Pfam PF01134 Glucose inhibited division protein A 7 370 4.5E-108 T 13-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Theam_0211 4416dc9d68c7489f035262e38ac65824 438 Gene3D G3DSA:3.50.50.60 4 180 1.8E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0211 4416dc9d68c7489f035262e38ac65824 438 Gene3D G3DSA:3.50.50.60 294 438 3.2E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0211 4416dc9d68c7489f035262e38ac65824 438 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 7 436 36.706 T 13-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 Theam_0108 e46fb826abdfd4827601899f8ac9636e 201 Gene3D G3DSA:3.30.700.20 3 193 4.4E-74 T 13-10-2018 IPR027485 AMMECR1, N-terminal Theam_0108 e46fb826abdfd4827601899f8ac9636e 201 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 10 186 2.3E-59 T 13-10-2018 IPR027623 AmmeMemoRadiSam system protein A Theam_0108 e46fb826abdfd4827601899f8ac9636e 201 Hamap MF_00645 Protein . 4 184 39.381 T 13-10-2018 IPR023472 Uncharacterised protein family MJ0810 Theam_0108 e46fb826abdfd4827601899f8ac9636e 201 Pfam PF01871 AMMECR1 12 186 4.1E-52 T 13-10-2018 IPR002733 AMMECR1 domain Theam_0108 e46fb826abdfd4827601899f8ac9636e 201 Gene3D G3DSA:3.30.1490.150 109 182 4.4E-74 T 13-10-2018 Theam_0108 e46fb826abdfd4827601899f8ac9636e 201 SUPERFAMILY SSF143447 2 199 1.44E-67 T 13-10-2018 IPR036071 AMMECR1 domain superfamily Theam_0108 e46fb826abdfd4827601899f8ac9636e 201 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 2 197 3.1E-70 T 13-10-2018 IPR023473 AMMECR1 Theam_0208 e2d34805e128ed5f4033754208452358 255 Gene3D G3DSA:1.25.40.10 4 195 2.8E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0208 e2d34805e128ed5f4033754208452358 255 SUPERFAMILY SSF48452 9 124 2.28E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1662 465ed1c1b450e31c6aba244fcdf9e8b7 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 10 88 1.7E-14 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1662 465ed1c1b450e31c6aba244fcdf9e8b7 140 SUPERFAMILY SSF51344 10 90 1.96E-15 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1662 465ed1c1b450e31c6aba244fcdf9e8b7 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 8 138 13.651 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1662 465ed1c1b450e31c6aba244fcdf9e8b7 140 Gene3D G3DSA:2.60.15.10 5 138 2.9E-23 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1662 465ed1c1b450e31c6aba244fcdf9e8b7 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 10 131 3.8E-20 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1662 465ed1c1b450e31c6aba244fcdf9e8b7 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 15 84 6.0E-7 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1693 1dbc06d99cebf26a7113d38630b04e2e 218 SUPERFAMILY SSF69593 14 213 1.57E-49 T 13-10-2018 Theam_1693 1dbc06d99cebf26a7113d38630b04e2e 218 SMART SM00563 48 162 1.3E-36 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Theam_1693 1dbc06d99cebf26a7113d38630b04e2e 218 Pfam PF01553 Acyltransferase 33 159 3.4E-32 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Theam_1693 1dbc06d99cebf26a7113d38630b04e2e 218 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 34 158 1.5E-30 T 13-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 Theam_0426 38ba3cf4083e07a19e9246930847cffe 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 251 262 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0426 38ba3cf4083e07a19e9246930847cffe 287 Pfam PF12801 4Fe-4S binding domain 17 27 590.0 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_0426 38ba3cf4083e07a19e9246930847cffe 287 Pfam PF12801 4Fe-4S binding domain 74 117 1.8E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_0426 38ba3cf4083e07a19e9246930847cffe 287 Pfam PF12801 4Fe-4S binding domain 180 215 4.1E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_0426 38ba3cf4083e07a19e9246930847cffe 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 225 236 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0426 38ba3cf4083e07a19e9246930847cffe 287 SUPERFAMILY SSF54862 85 276 1.34E-20 T 13-10-2018 Theam_0426 38ba3cf4083e07a19e9246930847cffe 287 Gene3D G3DSA:3.30.70.20 196 244 1.2E-7 T 13-10-2018 Theam_0437 ee137962d983f2a7014f23d5a6c66687 79 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 8.4E-21 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Theam_0437 ee137962d983f2a7014f23d5a6c66687 79 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 72 20.278 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Theam_0437 ee137962d983f2a7014f23d5a6c66687 79 Pfam PF02416 mttA/Hcf106 family 4 55 3.2E-21 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Theam_0437 ee137962d983f2a7014f23d5a6c66687 79 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 6.0E-11 T 13-10-2018 Theam_0437 ee137962d983f2a7014f23d5a6c66687 79 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 6.0E-11 T 13-10-2018 Theam_0437 ee137962d983f2a7014f23d5a6c66687 79 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 6.0E-11 T 13-10-2018 Theam_0994 f69487e2a207924058f86d887333937a 460 Pfam PF13177 DNA polymerase III, delta subunit 21 178 2.0E-50 T 13-10-2018 Theam_0994 f69487e2a207924058f86d887333937a 460 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 7.6E-6 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Theam_0994 f69487e2a207924058f86d887333937a 460 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 7.6E-6 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Theam_0994 f69487e2a207924058f86d887333937a 460 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 4 299 4.6E-127 T 13-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Theam_0994 f69487e2a207924058f86d887333937a 460 Gene3D G3DSA:1.10.8.60 8 239 3.0E-107 T 13-10-2018 Theam_0994 f69487e2a207924058f86d887333937a 460 SUPERFAMILY SSF48019 247 345 3.66E-5 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Theam_0994 f69487e2a207924058f86d887333937a 460 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 26 205 1.8E-56 T 13-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Theam_0994 f69487e2a207924058f86d887333937a 460 Gene3D G3DSA:3.40.50.300 13 177 3.0E-107 T 13-10-2018 Theam_0994 f69487e2a207924058f86d887333937a 460 SMART SM00382 37 179 7.0E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0994 f69487e2a207924058f86d887333937a 460 SUPERFAMILY SSF52540 32 222 9.71E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1117 471aba142b0caf865daed095232a806d 390 SUPERFAMILY SSF56762 13 390 1.96E-79 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1117 471aba142b0caf865daed095232a806d 390 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 40 65 - T 13-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Theam_1117 471aba142b0caf865daed095232a806d 390 Pfam PF00374 Nickel-dependent hydrogenase 304 390 5.2E-8 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Theam_1117 471aba142b0caf865daed095232a806d 390 Pfam PF00374 Nickel-dependent hydrogenase 40 108 6.2E-17 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Theam_1117 471aba142b0caf865daed095232a806d 390 Gene3D G3DSA:1.10.645.10 1 390 1.6E-94 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0722 0aacab78437af87c7194890c1a9e9c5a 192 Pfam PF02517 CAAX protease self-immunity 94 185 2.4E-13 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Theam_0761 f72213a1d99632488803df31ee2ad462 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 14 112 2.7E-21 T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Theam_0761 f72213a1d99632488803df31ee2ad462 122 Gene3D G3DSA:1.10.3830.10 1 117 3.9E-23 T 13-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Theam_0761 f72213a1d99632488803df31ee2ad462 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 66 77 - T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Theam_1695 0ebfbbe74224430fcc3c542f228fd89b 426 Gene3D G3DSA:1.10.3430.10 11 426 4.0E-142 T 13-10-2018 IPR029020 Ammonium/urea transporter Theam_1695 0ebfbbe74224430fcc3c542f228fd89b 426 TIGRFAM TIGR00836 amt: ammonium transporter 28 422 1.6E-137 T 13-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 Theam_1695 0ebfbbe74224430fcc3c542f228fd89b 426 ProSitePatterns PS01219 Ammonium transporters signature. 180 205 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Theam_1695 0ebfbbe74224430fcc3c542f228fd89b 426 Pfam PF00909 Ammonium Transporter Family 30 423 5.1E-123 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Theam_1695 0ebfbbe74224430fcc3c542f228fd89b 426 PRINTS PR00342 Rhesus blood group protein signature 219 237 2.5E-7 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Theam_1695 0ebfbbe74224430fcc3c542f228fd89b 426 PRINTS PR00342 Rhesus blood group protein signature 339 355 2.5E-7 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Theam_1695 0ebfbbe74224430fcc3c542f228fd89b 426 PRINTS PR00342 Rhesus blood group protein signature 283 296 2.5E-7 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Theam_1695 0ebfbbe74224430fcc3c542f228fd89b 426 PRINTS PR00342 Rhesus blood group protein signature 124 140 2.5E-7 T 13-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Theam_1695 0ebfbbe74224430fcc3c542f228fd89b 426 SUPERFAMILY SSF111352 24 400 1.44E-127 T 13-10-2018 Theam_0646 90f98e8e2d320d722175f82dec697779 254 Gene3D G3DSA:3.30.70.660 107 251 4.3E-45 T 13-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Theam_0646 90f98e8e2d320d722175f82dec697779 254 Pfam PF01416 tRNA pseudouridine synthase 8 102 1.9E-7 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0646 90f98e8e2d320d722175f82dec697779 254 Pfam PF01416 tRNA pseudouridine synthase 143 250 1.8E-27 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0646 90f98e8e2d320d722175f82dec697779 254 Gene3D G3DSA:3.30.70.580 1 105 1.5E-34 T 13-10-2018 Theam_0646 90f98e8e2d320d722175f82dec697779 254 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 249 34.58 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0646 90f98e8e2d320d722175f82dec697779 254 SUPERFAMILY SSF55120 1 253 9.78E-81 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0646 90f98e8e2d320d722175f82dec697779 254 PIRSF PIRSF001430 1 254 1.6E-80 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0646 90f98e8e2d320d722175f82dec697779 254 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 244 1.7E-61 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0962 c827674bca50d6d5cb08a77db52a1977 403 SUPERFAMILY SSF63411 231 382 2.23E-18 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Theam_0962 c827674bca50d6d5cb08a77db52a1977 403 Pfam PF00675 Insulinase (Peptidase family M16) 20 156 5.6E-29 T 13-10-2018 IPR011765 Peptidase M16, N-terminal Theam_0962 c827674bca50d6d5cb08a77db52a1977 403 Pfam PF05193 Peptidase M16 inactive domain 164 336 1.3E-21 T 13-10-2018 IPR007863 Peptidase M16, C-terminal Theam_0962 c827674bca50d6d5cb08a77db52a1977 403 SUPERFAMILY SSF63411 2 217 7.67E-56 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Theam_0962 c827674bca50d6d5cb08a77db52a1977 403 Gene3D G3DSA:3.30.830.10 218 400 4.6E-25 T 13-10-2018 Theam_0962 c827674bca50d6d5cb08a77db52a1977 403 Gene3D G3DSA:3.30.830.10 2 214 1.8E-62 T 13-10-2018 Theam_0268 c34915632108023082ae896ba9f83f7b 118 SUPERFAMILY SSF50104 4 106 1.39E-41 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Theam_0268 c34915632108023082ae896ba9f83f7b 118 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 7 101 24.723 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0268 c34915632108023082ae896ba9f83f7b 118 Gene3D G3DSA:2.30.30.30 1 106 8.0E-46 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Theam_0268 c34915632108023082ae896ba9f83f7b 118 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 44 107 6.9E-33 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0268 c34915632108023082ae896ba9f83f7b 118 SMART SM00739 8 35 1.2E-6 T 13-10-2018 IPR005824 KOW Theam_0268 c34915632108023082ae896ba9f83f7b 118 ProSitePatterns PS01108 Ribosomal protein L24 signature. 12 29 - T 13-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0268 c34915632108023082ae896ba9f83f7b 118 Pfam PF00467 KOW motif 12 42 2.2E-9 T 13-10-2018 IPR005824 KOW Theam_0268 c34915632108023082ae896ba9f83f7b 118 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 7 107 2.9E-43 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1413 613dbbfa5cb30ea24d681feb88bca706 208 SUPERFAMILY SSF53323 1 201 1.44E-24 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Theam_1413 613dbbfa5cb30ea24d681feb88bca706 208 Gene3D G3DSA:3.40.920.10 1 207 1.7E-50 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Theam_1413 613dbbfa5cb30ea24d681feb88bca706 208 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 198 1.2E-23 T 13-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Theam_0207 e2b70f0c01cb0df1562db6cd676dc1bc 141 Gene3D G3DSA:1.20.120.330 4 136 1.9E-10 T 13-10-2018 Theam_0156 f766d53fc0205861389a9291cf10035b 209 SUPERFAMILY SSF141371 117 188 1.31E-5 T 13-10-2018 Theam_0156 f766d53fc0205861389a9291cf10035b 209 Pfam PF07238 PilZ domain 95 183 2.2E-6 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Theam_0635 f4df1dec634954eccb7878a2c05c2501 330 Pfam PF11845 Protein of unknown function (DUF3365) 17 232 1.5E-31 T 13-10-2018 IPR021796 Protein of unknown function DUF3365 Theam_0635 f4df1dec634954eccb7878a2c05c2501 330 SMART SM00304 266 324 1.6E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Theam_0635 f4df1dec634954eccb7878a2c05c2501 330 Gene3D G3DSA:1.20.1480.50 230 330 3.0E-13 T 13-10-2018 Theam_0420 802cc091377abbd1b4134ea0f4adee43 169 Gene3D G3DSA:1.25.40.10 51 162 1.2E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0420 802cc091377abbd1b4134ea0f4adee43 169 SUPERFAMILY SSF48452 69 164 3.03E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0465 5a28567bfb996800d29616d718ff5185 298 Pfam PF01435 Peptidase family M48 65 244 1.8E-30 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Theam_1007 17dbf27d037ac3b36e9a992ac8e01a50 408 Pfam PF12704 MacB-like periplasmic core domain 25 243 2.0E-18 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Theam_1007 17dbf27d037ac3b36e9a992ac8e01a50 408 Pfam PF02687 FtsX-like permease family 300 399 2.8E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Theam_0583 6af3675dca0ac1d8f40d54f5aa880edb 124 Gene3D G3DSA:3.40.1360.10 1 117 3.7E-25 T 13-10-2018 Theam_0583 6af3675dca0ac1d8f40d54f5aa880edb 124 Pfam PF13155 Toprim-like 25 93 5.6E-5 T 13-10-2018 Theam_0583 6af3675dca0ac1d8f40d54f5aa880edb 124 SUPERFAMILY SSF110455 16 112 1.96E-14 T 13-10-2018 Theam_0583 6af3675dca0ac1d8f40d54f5aa880edb 124 SMART SM00493 22 92 1.4E-5 T 13-10-2018 IPR006171 TOPRIM domain Theam_0099 9245621437f684878af86c19f7096361 220 Gene3D G3DSA:3.40.50.2020 3 210 4.1E-69 T 13-10-2018 Theam_0099 9245621437f684878af86c19f7096361 220 Gene3D G3DSA:3.30.1310.20 56 122 4.1E-69 T 13-10-2018 Theam_0099 9245621437f684878af86c19f7096361 220 SUPERFAMILY SSF53271 1 215 2.68E-43 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Theam_0099 9245621437f684878af86c19f7096361 220 Pfam PF00156 Phosphoribosyl transferase domain 5 201 2.4E-26 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Theam_0433 80a3f058641f8b699fb278b6455eb219 126 Gene3D G3DSA:3.30.1360.170 1 69 2.0E-10 T 13-10-2018 Theam_0433 80a3f058641f8b699fb278b6455eb219 126 SUPERFAMILY SSF69796 2 65 1.83E-7 T 13-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Theam_0433 80a3f058641f8b699fb278b6455eb219 126 Pfam PF02511 Thymidylate synthase complementing protein 4 65 2.5E-8 T 13-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Theam_1384 2359e90cfdf3903cbe3d5026853afe8e 312 Pfam PF00669 Bacterial flagellin N-terminal helical region 20 141 1.0E-9 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Theam_1384 2359e90cfdf3903cbe3d5026853afe8e 312 SUPERFAMILY SSF64518 1 312 3.4E-47 T 13-10-2018 Theam_1384 2359e90cfdf3903cbe3d5026853afe8e 312 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 185 1.1E-39 T 13-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 Theam_1384 2359e90cfdf3903cbe3d5026853afe8e 312 Gene3D G3DSA:1.20.1330.10 40 258 3.8E-33 T 13-10-2018 Theam_1022 9efc3ec1b9a5a0a73d82cb8727bb95bb 433 SUPERFAMILY SSF52210 269 420 1.24E-20 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Theam_1022 9efc3ec1b9a5a0a73d82cb8727bb95bb 433 Pfam PF16114 ATP citrate lyase citrate-binding 253 430 4.2E-85 T 13-10-2018 IPR032263 ATP-citrate synthase, citrate-binding domain KEGG: 00020+2.3.3.8|KEGG: 00720+2.3.3.8|MetaCyc: PWY-5172|Reactome: R-HSA-163765|Reactome: R-HSA-6798695|Reactome: R-HSA-75105 Theam_1022 9efc3ec1b9a5a0a73d82cb8727bb95bb 433 SUPERFAMILY SSF56059 7 246 2.12E-30 T 13-10-2018 Theam_1022 9efc3ec1b9a5a0a73d82cb8727bb95bb 433 Gene3D G3DSA:3.30.470.110 1 244 1.5E-80 T 13-10-2018 Theam_1022 9efc3ec1b9a5a0a73d82cb8727bb95bb 433 Gene3D G3DSA:3.40.50.261 255 417 2.2E-70 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Theam_1022 9efc3ec1b9a5a0a73d82cb8727bb95bb 433 Pfam PF08442 ATP-grasp domain 52 214 7.6E-10 T 13-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Theam_0464 843876985409c7d7dcf48b4b1c41a2bf 277 Gene3D G3DSA:3.10.580.10 151 271 2.5E-43 T 13-10-2018 Theam_0464 843876985409c7d7dcf48b4b1c41a2bf 277 SUPERFAMILY SSF54631 214 272 7.77E-14 T 13-10-2018 Theam_0464 843876985409c7d7dcf48b4b1c41a2bf 277 Pfam PF00571 CBS domain 154 210 8.9E-8 T 13-10-2018 IPR000644 CBS domain Theam_0464 843876985409c7d7dcf48b4b1c41a2bf 277 Pfam PF00571 CBS domain 219 271 4.6E-11 T 13-10-2018 IPR000644 CBS domain Theam_0464 843876985409c7d7dcf48b4b1c41a2bf 277 SMART SM00116 163 210 2.7E-4 T 13-10-2018 IPR000644 CBS domain Theam_0464 843876985409c7d7dcf48b4b1c41a2bf 277 SMART SM00116 226 274 9.7E-6 T 13-10-2018 IPR000644 CBS domain Theam_0464 843876985409c7d7dcf48b4b1c41a2bf 277 SUPERFAMILY SSF53697 1 223 2.97E-58 T 13-10-2018 Theam_0464 843876985409c7d7dcf48b4b1c41a2bf 277 Gene3D G3DSA:3.40.50.10490 1 150 1.3E-57 T 13-10-2018 Theam_0464 843876985409c7d7dcf48b4b1c41a2bf 277 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 1 265 1.0E-105 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Theam_0464 843876985409c7d7dcf48b4b1c41a2bf 277 Pfam PF01380 SIS domain 1 125 4.1E-28 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Theam_0809 d8a3e5e9782150e98a6579c2f53c1221 918 Gene3D G3DSA:3.20.20.70 40 271 5.5E-9 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0809 d8a3e5e9782150e98a6579c2f53c1221 918 Pfam PF03537 Glycoside-hydrolase family GH114 48 263 9.3E-8 T 13-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain Theam_0809 d8a3e5e9782150e98a6579c2f53c1221 918 SUPERFAMILY SSF51445 39 275 2.53E-21 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Theam_0921 05aa8ff3954769b300f2e72aac9f582f 273 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 232 258 - T 13-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 Theam_0921 05aa8ff3954769b300f2e72aac9f582f 273 Pfam PF01148 Cytidylyltransferase family 4 269 3.6E-53 T 13-10-2018 Theam_1630 76ef66fdc91a4d399989022fe082ebe0 142 Pfam PF03259 Roadblock/LC7 domain 34 121 5.0E-11 T 13-10-2018 IPR004942 Roadblock/LAMTOR2 domain Theam_1630 76ef66fdc91a4d399989022fe082ebe0 142 SUPERFAMILY SSF103196 29 142 4.92E-17 T 13-10-2018 Theam_1630 76ef66fdc91a4d399989022fe082ebe0 142 Gene3D G3DSA:3.30.450.30 27 142 1.9E-17 T 13-10-2018 Theam_1630 76ef66fdc91a4d399989022fe082ebe0 142 SMART SM00960 33 122 5.0E-14 T 13-10-2018 IPR004942 Roadblock/LAMTOR2 domain Theam_0604 e771b8d3295030b3ffb93e49dbe458de 233 SUPERFAMILY SSF53335 1 186 8.44E-31 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_0604 e771b8d3295030b3ffb93e49dbe458de 233 Gene3D G3DSA:3.40.50.150 6 204 3.3E-28 T 13-10-2018 Theam_0604 e771b8d3295030b3ffb93e49dbe458de 233 Pfam PF08241 Methyltransferase domain 44 127 3.0E-17 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Theam_1747 c2366112201cb5fb61139be806d0ce39 488 SUPERFAMILY SSF52540 49 439 5.11E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1747 c2366112201cb5fb61139be806d0ce39 488 Gene3D G3DSA:3.40.50.300 25 169 1.2E-7 T 13-10-2018 Theam_1747 c2366112201cb5fb61139be806d0ce39 488 Gene3D G3DSA:3.40.50.300 268 449 1.6E-17 T 13-10-2018 Theam_1747 c2366112201cb5fb61139be806d0ce39 488 Pfam PF12696 TraM recognition site of TraD and TraG 319 394 7.9E-11 T 13-10-2018 IPR032689 TraD/TraG, TraM recognition site Theam_0080 9d140f751b4cbdd841148c7c40320672 197 Pfam PF00156 Phosphoribosyl transferase domain 46 152 7.2E-13 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Theam_0080 9d140f751b4cbdd841148c7c40320672 197 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 7 192 2.1E-77 T 13-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Theam_0080 9d140f751b4cbdd841148c7c40320672 197 SUPERFAMILY SSF53271 5 184 3.69E-40 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Theam_0080 9d140f751b4cbdd841148c7c40320672 197 Gene3D G3DSA:3.40.50.2020 5 195 1.9E-62 T 13-10-2018 Theam_0080 9d140f751b4cbdd841148c7c40320672 197 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 197 26.337 T 13-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Theam_1800 e936b07b417d60f605f045da08badef5 351 Pfam PF00482 Type II secretion system (T2SS), protein F 12 153 2.1E-13 T 13-10-2018 IPR018076 Type II secretion system F domain Theam_1800 e936b07b417d60f605f045da08badef5 351 Gene3D G3DSA:1.20.81.30 2 129 6.8E-19 T 13-10-2018 Theam_1114 1ebe556f633b9a850808a4b8c6e37686 243 Gene3D G3DSA:3.30.70.1070 172 239 1.6E-18 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Theam_1114 1ebe556f633b9a850808a4b8c6e37686 243 Pfam PF05036 Sporulation related domain 170 239 4.7E-16 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Theam_1114 1ebe556f633b9a850808a4b8c6e37686 243 SUPERFAMILY SSF110997 169 240 3.14E-19 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Theam_0224 5e16d2b49bcf01b89061d4ea920a51b6 164 SUPERFAMILY SSF50182 117 161 1.27E-9 T 13-10-2018 IPR010920 LSM domain superfamily Theam_0224 5e16d2b49bcf01b89061d4ea920a51b6 164 SUPERFAMILY SSF46785 5 60 2.38E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0224 5e16d2b49bcf01b89061d4ea920a51b6 164 Pfam PF17209 Hfq protein 118 161 1.6E-10 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Theam_0224 5e16d2b49bcf01b89061d4ea920a51b6 164 Gene3D G3DSA:2.30.30.100 105 164 1.5E-11 T 13-10-2018 Theam_1172 bde2e58f0f8c701edf363757822b5aac 397 Pfam PF03783 Curli production assembly/transport component CsgG 140 207 6.4E-9 T 13-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 Theam_1641 ca54992e427ae5d3d6809847acaa1766 362 Gene3D G3DSA:3.40.50.2000 48 346 2.9E-37 T 13-10-2018 Theam_1641 ca54992e427ae5d3d6809847acaa1766 362 Pfam PF00534 Glycosyl transferases group 1 170 334 8.6E-24 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Theam_1641 ca54992e427ae5d3d6809847acaa1766 362 SUPERFAMILY SSF53756 26 353 4.19E-45 T 13-10-2018 Theam_1641 ca54992e427ae5d3d6809847acaa1766 362 Gene3D G3DSA:3.40.50.2000 156 341 2.9E-37 T 13-10-2018 Theam_0595 d2a4ac2cf9a3ed0f2e9c11ccd7821f83 368 Gene3D G3DSA:3.40.50.2000 13 176 7.7E-75 T 13-10-2018 Theam_0595 d2a4ac2cf9a3ed0f2e9c11ccd7821f83 368 Pfam PF00534 Glycosyl transferases group 1 197 337 2.1E-28 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Theam_0595 d2a4ac2cf9a3ed0f2e9c11ccd7821f83 368 Gene3D G3DSA:3.40.50.2000 177 337 7.7E-75 T 13-10-2018 Theam_0595 d2a4ac2cf9a3ed0f2e9c11ccd7821f83 368 SUPERFAMILY SSF53756 10 337 2.51E-51 T 13-10-2018 Theam_0595 d2a4ac2cf9a3ed0f2e9c11ccd7821f83 368 Pfam PF13439 Glycosyltransferase Family 4 13 180 3.9E-8 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Theam_0373 e07871150caf2dd52d0dfed631f02405 534 SUPERFAMILY SSF110921 400 520 7.32E-18 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Theam_0373 e07871150caf2dd52d0dfed631f02405 534 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 2 532 4.1E-263 T 13-10-2018 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 Theam_0373 e07871150caf2dd52d0dfed631f02405 534 Pfam PF08502 LeuA allosteric (dimerisation) domain 374 524 5.8E-28 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Theam_0373 e07871150caf2dd52d0dfed631f02405 534 SMART SM00917 372 525 7.0E-34 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Theam_0373 e07871150caf2dd52d0dfed631f02405 534 Gene3D G3DSA:3.20.20.70 1 323 3.1E-110 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0373 e07871150caf2dd52d0dfed631f02405 534 Gene3D G3DSA:3.30.160.270 358 523 3.4E-6 T 13-10-2018 Theam_0373 e07871150caf2dd52d0dfed631f02405 534 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 9 25 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Theam_0373 e07871150caf2dd52d0dfed631f02405 534 SUPERFAMILY SSF51569 2 291 1.3E-82 T 13-10-2018 Theam_0373 e07871150caf2dd52d0dfed631f02405 534 Pfam PF00682 HMGL-like 2 273 8.2E-49 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Theam_0817 e6ab8c1c7d0b5a9714a250c9698de787 354 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 349 1.2E-62 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Theam_1326 dac34e737ddb7c316d0cef04ca37f6b9 56 Gene3D G3DSA:2.20.25.10 9 56 1.7E-22 T 13-10-2018 Theam_1326 dac34e737ddb7c316d0cef04ca37f6b9 56 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 2 55 26.679 T 13-10-2018 IPR038053 Uncharacterised protein family UPF0434 Theam_1326 dac34e737ddb7c316d0cef04ca37f6b9 56 Pfam PF03966 Trm112p-like protein 5 41 1.5E-9 T 13-10-2018 IPR005651 Trm112-like Theam_1326 dac34e737ddb7c316d0cef04ca37f6b9 56 SUPERFAMILY SSF158997 2 55 1.15E-20 T 13-10-2018 Theam_1023 ea995f51e7e1b742b86f32a030ff2d9f 735 Pfam PF03971 Monomeric isocitrate dehydrogenase 6 733 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Theam_1023 ea995f51e7e1b742b86f32a030ff2d9f 735 SUPERFAMILY SSF53659 4 735 0.0 T 13-10-2018 Theam_1023 ea995f51e7e1b742b86f32a030ff2d9f 735 PIRSF PIRSF009407 1 735 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Theam_1023 ea995f51e7e1b742b86f32a030ff2d9f 735 Gene3D G3DSA:3.40.718.10 382 650 5.3E-7 T 13-10-2018 Theam_1023 ea995f51e7e1b742b86f32a030ff2d9f 735 Gene3D G3DSA:3.40.718.10 83 292 1.9E-6 T 13-10-2018 Theam_1023 ea995f51e7e1b742b86f32a030ff2d9f 735 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 2 735 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Theam_0885 35edff07d8dcbabe5e2382c0ff94b3ea 345 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 65 9.3E-19 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0885 35edff07d8dcbabe5e2382c0ff94b3ea 345 SUPERFAMILY SSF52418 78 342 3.4E-95 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0885 35edff07d8dcbabe5e2382c0ff94b3ea 345 SUPERFAMILY SSF47648 1 69 5.89E-19 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0885 35edff07d8dcbabe5e2382c0ff94b3ea 345 Gene3D G3DSA:3.40.1030.10 72 322 8.3E-137 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0885 35edff07d8dcbabe5e2382c0ff94b3ea 345 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 7 338 9.1E-135 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Theam_0885 35edff07d8dcbabe5e2382c0ff94b3ea 345 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 339 40.514 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Theam_0885 35edff07d8dcbabe5e2382c0ff94b3ea 345 Pfam PF00591 Glycosyl transferase family, a/b domain 78 328 8.8E-98 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Theam_0885 35edff07d8dcbabe5e2382c0ff94b3ea 345 Gene3D G3DSA:1.20.970.10 7 187 8.3E-137 T 13-10-2018 Theam_1043 8aef1ab4c509966ac3879f2fac1c0fe9 251 SMART SM00518 2 246 0.0018 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Theam_1043 8aef1ab4c509966ac3879f2fac1c0fe9 251 Gene3D G3DSA:3.20.20.150 14 250 1.2E-51 T 13-10-2018 Theam_1043 8aef1ab4c509966ac3879f2fac1c0fe9 251 SUPERFAMILY SSF51658 34 248 3.27E-38 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily Theam_1043 8aef1ab4c509966ac3879f2fac1c0fe9 251 Pfam PF01261 Xylose isomerase-like TIM barrel 44 209 2.9E-18 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Theam_0081 352b4ce14408e6a630cdb26c12eb7e0d 324 Gene3D G3DSA:1.10.600.10 2 323 1.6E-104 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Theam_0081 352b4ce14408e6a630cdb26c12eb7e0d 324 Pfam PF00348 Polyprenyl synthetase 34 270 1.4E-70 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Theam_0081 352b4ce14408e6a630cdb26c12eb7e0d 324 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site Theam_0081 352b4ce14408e6a630cdb26c12eb7e0d 324 SUPERFAMILY SSF48576 5 324 1.18E-93 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Theam_0404 a42eeecb240fb2eada09f11a16a33817 519 SUPERFAMILY SSF51905 83 516 2.71E-32 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0404 a42eeecb240fb2eada09f11a16a33817 519 PIRSF PIRSF038984 2 519 2.9E-175 T 13-10-2018 IPR028348 FAD dependent protein Theam_0404 a42eeecb240fb2eada09f11a16a33817 519 Gene3D G3DSA:3.50.50.60 75 284 5.8E-71 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0404 a42eeecb240fb2eada09f11a16a33817 519 Gene3D G3DSA:3.50.50.60 456 519 2.1E-13 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0404 a42eeecb240fb2eada09f11a16a33817 519 Pfam PF00890 FAD binding domain 85 116 1.0E-7 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Theam_0783 ee597fe5d4a2b71f5b1034ce91f56af9 203 Gene3D G3DSA:3.90.10.10 22 112 2.2E-5 T 13-10-2018 Theam_0783 ee597fe5d4a2b71f5b1034ce91f56af9 203 SUPERFAMILY SSF48695 37 197 1.57E-10 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_0405 dadb5aea290faa33f4c860a3259cb054 332 Pfam PF04332 Protein of unknown function (DUF475) 45 325 6.3E-84 T 13-10-2018 IPR007427 Protein of unknown function DUF475 Theam_0841 b8cd2cdc9801af7073812e609c381ca7 396 SUPERFAMILY SSF51905 4 322 1.0E-27 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0841 b8cd2cdc9801af7073812e609c381ca7 396 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 295 6.0E-19 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Theam_0841 b8cd2cdc9801af7073812e609c381ca7 396 Gene3D G3DSA:3.50.50.100 1 390 3.1E-78 T 13-10-2018 Theam_0841 b8cd2cdc9801af7073812e609c381ca7 396 SUPERFAMILY SSF51905 122 248 1.61E-7 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0470 6fc781bfd8e9705644b3e4cce76a51d1 53 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 33 4.0E-6 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0470 6fc781bfd8e9705644b3e4cce76a51d1 53 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 15.46 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0470 6fc781bfd8e9705644b3e4cce76a51d1 53 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 46 9.7E-22 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0470 6fc781bfd8e9705644b3e4cce76a51d1 53 Pfam PF00468 Ribosomal protein L34 3 46 3.3E-22 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_1710 1296755e753a1b777bf5101c24e0927a 364 Pfam PF13280 WYL domain 157 298 2.1E-8 T 13-10-2018 IPR026881 WYL domain Theam_0914 6fe40ed54614eb10c920fd0d301112dc 59 SUPERFAMILY SSF57829 1 57 2.38E-23 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Theam_0914 6fe40ed54614eb10c920fd0d301112dc 59 Pfam PF01783 Ribosomal L32p protein family 2 56 1.8E-28 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0914 6fe40ed54614eb10c920fd0d301112dc 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 56 1.7E-26 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0914 6fe40ed54614eb10c920fd0d301112dc 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 21.781 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0707 8be435c4f77d0e33a4f4cee1fd19e5c1 236 Pfam PF00156 Phosphoribosyl transferase domain 123 233 1.6E-7 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Theam_0707 8be435c4f77d0e33a4f4cee1fd19e5c1 236 Gene3D G3DSA:3.40.50.2020 62 232 2.3E-17 T 13-10-2018 Theam_0707 8be435c4f77d0e33a4f4cee1fd19e5c1 236 SUPERFAMILY SSF53271 103 233 3.15E-25 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Theam_0409 78f356271f321591db93da6553854600 95 Pfam PF04456 Protein of unknown function (DUF503) 5 84 3.1E-31 T 13-10-2018 IPR007546 Protein of unknown function DUF503 Theam_0409 78f356271f321591db93da6553854600 95 Gene3D G3DSA:3.30.70.1120 1 93 1.5E-29 T 13-10-2018 IPR036746 TT1725-like superfamily Theam_0409 78f356271f321591db93da6553854600 95 SUPERFAMILY SSF103007 4 94 2.48E-29 T 13-10-2018 IPR036746 TT1725-like superfamily Theam_1375 c943c7bdeb832e6bcfc3803fab78e5fd 172 Pfam PF09918 Uncharacterized protein containing a ferredoxin domain (DUF2148) 103 170 6.5E-29 T 13-10-2018 IPR019224 Protein of unknown function DUF2148 Theam_0947 6514834c52a81504727690406a1a4417 351 SUPERFAMILY SSF48452 118 316 2.2E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0947 6514834c52a81504727690406a1a4417 351 Pfam PF13181 Tetratricopeptide repeat 118 147 0.0052 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0947 6514834c52a81504727690406a1a4417 351 Gene3D G3DSA:1.25.40.10 16 321 3.2E-26 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0947 6514834c52a81504727690406a1a4417 351 SUPERFAMILY SSF48452 44 220 1.9E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0947 6514834c52a81504727690406a1a4417 351 SMART SM00028 186 219 77.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0947 6514834c52a81504727690406a1a4417 351 SMART SM00028 115 148 9.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_0947 6514834c52a81504727690406a1a4417 351 SMART SM00028 81 114 180.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1571 3020d9cf1178a56a7a08a3cb8204b246 216 Pfam PF08668 HDOD domain 13 129 4.5E-24 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Theam_1571 3020d9cf1178a56a7a08a3cb8204b246 216 SUPERFAMILY SSF109604 3 180 2.42E-31 T 13-10-2018 Theam_1571 3020d9cf1178a56a7a08a3cb8204b246 216 Gene3D G3DSA:1.10.3210.10 1 133 2.3E-27 T 13-10-2018 Theam_1119 ee88e2762fe764b21fc8c025606ae07b 294 Pfam PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus 86 225 1.1E-12 T 13-10-2018 IPR007525 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal Theam_0772 24a1823adea2419d363dd0e76c2ebee1 443 Pfam PF01523 Putative modulator of DNA gyrase 21 309 2.4E-59 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Theam_0772 24a1823adea2419d363dd0e76c2ebee1 443 SUPERFAMILY SSF111283 3 443 1.83E-113 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Theam_0772 24a1823adea2419d363dd0e76c2ebee1 443 Gene3D G3DSA:3.30.2290.10 1 217 3.1E-51 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Theam_0191 b0d9935e3f8a4f2c444859d3681098dc 406 SUPERFAMILY SSF53383 5 399 2.06E-108 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Theam_0191 b0d9935e3f8a4f2c444859d3681098dc 406 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Theam_0191 b0d9935e3f8a4f2c444859d3681098dc 406 Pfam PF00155 Aminotransferase class I and II 33 379 2.5E-63 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Theam_0191 b0d9935e3f8a4f2c444859d3681098dc 406 Gene3D G3DSA:3.90.1150.10 296 393 3.5E-125 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Theam_0191 b0d9935e3f8a4f2c444859d3681098dc 406 Gene3D G3DSA:3.40.640.10 65 295 3.5E-125 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Theam_0862 bac1f35309d805d3a1b6d4062d4433df 429 Pfam PF02321 Outer membrane efflux protein 22 219 3.3E-31 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Theam_0862 bac1f35309d805d3a1b6d4062d4433df 429 Pfam PF02321 Outer membrane efflux protein 240 419 3.6E-35 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Theam_0862 bac1f35309d805d3a1b6d4062d4433df 429 Gene3D G3DSA:1.20.1600.10 16 427 3.1E-86 T 13-10-2018 Theam_0862 bac1f35309d805d3a1b6d4062d4433df 429 SUPERFAMILY SSF56954 2 425 2.22E-81 T 13-10-2018 Theam_0862 bac1f35309d805d3a1b6d4062d4433df 429 PIRSF PIRSF001892 7 429 2.6E-61 T 13-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 Theam_0652 0f510b98d56476034764d6683e45aa0c 187 Pfam PF13091 PLD-like domain 54 180 1.3E-30 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Theam_0652 0f510b98d56476034764d6683e45aa0c 187 SUPERFAMILY SSF56024 44 182 9.2E-35 T 13-10-2018 Theam_0652 0f510b98d56476034764d6683e45aa0c 187 SMART SM00155 124 151 0.0027 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Theam_0652 0f510b98d56476034764d6683e45aa0c 187 Gene3D G3DSA:3.30.870.10 18 187 1.5E-49 T 13-10-2018 Theam_0941 92fdec4d3a7ca60bf6f8f06775183ebb 223 Gene3D G3DSA:1.25.40.10 14 128 7.4E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0941 92fdec4d3a7ca60bf6f8f06775183ebb 223 Gene3D G3DSA:1.25.40.10 129 212 3.7E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0941 92fdec4d3a7ca60bf6f8f06775183ebb 223 SUPERFAMILY SSF48452 26 207 1.52E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1230 215326dacf97d18630636240ec6f98ab 263 Gene3D G3DSA:1.10.150.130 1 85 1.8E-7 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Theam_1230 215326dacf97d18630636240ec6f98ab 263 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 2 75 5.2E-5 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Theam_1230 215326dacf97d18630636240ec6f98ab 263 Gene3D G3DSA:1.10.443.10 92 252 2.9E-7 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Theam_1230 215326dacf97d18630636240ec6f98ab 263 SUPERFAMILY SSF56349 2 233 1.12E-15 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Theam_1443 a6209e2a626588886d99e20ec6674dfa 232 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 205 230 1.3E-59 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Theam_1443 a6209e2a626588886d99e20ec6674dfa 232 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 34 53 1.3E-59 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Theam_1443 a6209e2a626588886d99e20ec6674dfa 232 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 73 92 1.3E-59 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Theam_1443 a6209e2a626588886d99e20ec6674dfa 232 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 181 202 1.3E-59 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Theam_1443 a6209e2a626588886d99e20ec6674dfa 232 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 53 73 1.3E-59 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Theam_1443 a6209e2a626588886d99e20ec6674dfa 232 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 160 180 1.3E-59 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Theam_1443 a6209e2a626588886d99e20ec6674dfa 232 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 36 231 4.0E-77 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Theam_1443 a6209e2a626588886d99e20ec6674dfa 232 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 104 118 6.4E-18 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Theam_1443 a6209e2a626588886d99e20ec6674dfa 232 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 221 231 6.4E-18 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Theam_1443 a6209e2a626588886d99e20ec6674dfa 232 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 92 104 6.4E-18 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Theam_1443 a6209e2a626588886d99e20ec6674dfa 232 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 32 41 6.4E-18 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Theam_1443 a6209e2a626588886d99e20ec6674dfa 232 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 132 144 6.4E-18 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Theam_1443 a6209e2a626588886d99e20ec6674dfa 232 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 153 165 6.4E-18 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Theam_1443 a6209e2a626588886d99e20ec6674dfa 232 Pfam PF00813 FliP family 36 227 3.8E-75 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Theam_1266 39d14150ae357f44502d5c846a3ae4aa 269 SUPERFAMILY SSF54506 137 262 2.63E-30 T 13-10-2018 Theam_1266 39d14150ae357f44502d5c846a3ae4aa 269 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 70 84 - T 13-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Theam_1266 39d14150ae357f44502d5c846a3ae4aa 269 Gene3D G3DSA:3.10.310.10 119 252 3.9E-79 T 13-10-2018 Theam_1266 39d14150ae357f44502d5c846a3ae4aa 269 Gene3D G3DSA:3.10.310.10 4 261 3.9E-79 T 13-10-2018 Theam_1266 39d14150ae357f44502d5c846a3ae4aa 269 Pfam PF01678 Diaminopimelate epimerase 142 238 2.9E-15 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Theam_1266 39d14150ae357f44502d5c846a3ae4aa 269 Pfam PF01678 Diaminopimelate epimerase 5 114 2.6E-31 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Theam_1266 39d14150ae357f44502d5c846a3ae4aa 269 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 265 32.387 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Theam_1266 39d14150ae357f44502d5c846a3ae4aa 269 SUPERFAMILY SSF54506 3 127 1.74E-35 T 13-10-2018 Theam_1266 39d14150ae357f44502d5c846a3ae4aa 269 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 263 4.1E-78 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Theam_1088 a1e90bc20cce1c6426bf1b0ab8b0ce63 453 Pfam PF01565 FAD binding domain 38 176 5.7E-44 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Theam_1088 a1e90bc20cce1c6426bf1b0ab8b0ce63 453 SUPERFAMILY SSF55103 217 452 2.13E-69 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Theam_1088 a1e90bc20cce1c6426bf1b0ab8b0ce63 453 Gene3D G3DSA:3.30.70.2740 333 411 1.9E-17 T 13-10-2018 Theam_1088 a1e90bc20cce1c6426bf1b0ab8b0ce63 453 Pfam PF02913 FAD linked oxidases, C-terminal domain 213 450 2.2E-70 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Theam_1088 a1e90bc20cce1c6426bf1b0ab8b0ce63 453 SUPERFAMILY SSF56176 4 214 1.4E-72 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Theam_1088 a1e90bc20cce1c6426bf1b0ab8b0ce63 453 Gene3D G3DSA:3.30.465.40 2 234 7.0E-77 T 13-10-2018 Theam_1088 a1e90bc20cce1c6426bf1b0ab8b0ce63 453 Gene3D G3DSA:1.10.45.10 412 451 2.1E-10 T 13-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Theam_0493 853d600ed10d798c22c92449eee194ea 292 Pfam PF00696 Amino acid kinase family 24 270 2.4E-48 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Theam_0493 853d600ed10d798c22c92449eee194ea 292 TIGRFAM TIGR00761 argB: acetylglutamate kinase 25 268 5.3E-83 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Theam_0493 853d600ed10d798c22c92449eee194ea 292 Hamap MF_00082 Acetylglutamate kinase [argB]. 23 286 50.827 T 13-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Theam_0493 853d600ed10d798c22c92449eee194ea 292 Gene3D G3DSA:3.40.1160.10 2 292 1.5E-104 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Theam_0493 853d600ed10d798c22c92449eee194ea 292 PRINTS PR00474 Glutamate 5-kinase family signature 243 263 6.1E-11 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Theam_0493 853d600ed10d798c22c92449eee194ea 292 PRINTS PR00474 Glutamate 5-kinase family signature 55 69 6.1E-11 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Theam_0493 853d600ed10d798c22c92449eee194ea 292 PRINTS PR00474 Glutamate 5-kinase family signature 193 220 6.1E-11 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Theam_0493 853d600ed10d798c22c92449eee194ea 292 SUPERFAMILY SSF53633 3 291 1.44E-98 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Theam_0493 853d600ed10d798c22c92449eee194ea 292 PIRSF PIRSF000728 7 292 4.3E-114 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Theam_0495 7f9f84b37e5c70892ac9258e3ed376e0 399 PIRSF PIRSF000267 1 396 1.3E-109 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Theam_0495 7f9f84b37e5c70892ac9258e3ed376e0 399 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 392 8.5E-85 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Theam_0495 7f9f84b37e5c70892ac9258e3ed376e0 399 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 380 1.1E-98 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Theam_0083 b70d41c6b9745e333950d981531e6832 121 Pfam PF01909 Nucleotidyltransferase domain 21 92 1.4E-10 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Theam_0083 b70d41c6b9745e333950d981531e6832 121 SUPERFAMILY SSF81301 18 111 1.54E-15 T 13-10-2018 Theam_0083 b70d41c6b9745e333950d981531e6832 121 Gene3D G3DSA:3.30.460.10 11 116 9.7E-22 T 13-10-2018 Theam_0469 8ac5282d69091b2fffb75689a9f303e1 224 Gene3D G3DSA:3.30.200.20 39 110 2.1E-6 T 13-10-2018 Theam_0469 8ac5282d69091b2fffb75689a9f303e1 224 Gene3D G3DSA:1.10.510.10 111 182 2.1E-6 T 13-10-2018 Theam_0469 8ac5282d69091b2fffb75689a9f303e1 224 SUPERFAMILY SSF56112 36 169 3.18E-15 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Theam_0318 d22a60d1321e4af9b607695d4e01ba98 247 Gene3D G3DSA:1.10.10.10 6 110 1.2E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0318 d22a60d1321e4af9b607695d4e01ba98 247 SUPERFAMILY SSF46785 9 94 9.11E-10 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0318 d22a60d1321e4af9b607695d4e01ba98 247 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 13 79 2.1E-22 T 13-10-2018 IPR002831 Transcription regulator TrmB, N-terminal Theam_0638 87878d1c8730a91e9ae6261cb25dcc70 268 SUPERFAMILY SSF53850 1 257 1.38E-73 T 13-10-2018 Theam_0638 87878d1c8730a91e9ae6261cb25dcc70 268 Hamap MF_00995 Chorismate dehydratase [mqnA]. 3 263 29.252 T 13-10-2018 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374 Theam_0638 87878d1c8730a91e9ae6261cb25dcc70 268 Pfam PF02621 Menaquinone biosynthesis 2 257 7.6E-64 T 13-10-2018 IPR003773 Menaquinone biosynthesis enzyme Theam_0638 87878d1c8730a91e9ae6261cb25dcc70 268 Gene3D G3DSA:3.40.190.10 3 253 5.4E-82 T 13-10-2018 Theam_0638 87878d1c8730a91e9ae6261cb25dcc70 268 Gene3D G3DSA:3.40.190.10 77 175 5.4E-82 T 13-10-2018 Theam_1496 dc4fdcabbc539c5f5a3fa7597cc113c5 155 SUPERFAMILY SSF143243 8 147 2.48E-33 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1496 dc4fdcabbc539c5f5a3fa7597cc113c5 155 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 75 128 5.0E-8 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1496 dc4fdcabbc539c5f5a3fa7597cc113c5 155 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 28 147 3.9E-28 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1496 dc4fdcabbc539c5f5a3fa7597cc113c5 155 Gene3D G3DSA:3.30.460.80 1 124 4.6E-24 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0112 8d5f71c22910df20c4d82bf3c9373921 192 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 69 91 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Theam_0112 8d5f71c22910df20c4d82bf3c9373921 192 Pfam PF01066 CDP-alcohol phosphatidyltransferase 28 91 1.2E-15 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Theam_0112 8d5f71c22910df20c4d82bf3c9373921 192 Gene3D G3DSA:1.20.120.1760 9 192 3.3E-57 T 13-10-2018 Theam_1609 a5e4a2510d1446e789dcbfa48e39079b 156 Gene3D G3DSA:3.10.690.10 1 140 1.4E-40 T 13-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 Theam_1609 a5e4a2510d1446e789dcbfa48e39079b 156 SUPERFAMILY SSF103256 1 132 5.23E-37 T 13-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 Theam_1609 a5e4a2510d1446e789dcbfa48e39079b 156 Pfam PF02577 Bifunctional nuclease 6 131 2.2E-37 T 13-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 Theam_1234 1d7fc7901501907747e492152c48f2b0 294 Gene3D G3DSA:3.40.50.300 23 283 2.2E-88 T 13-10-2018 Theam_1234 1d7fc7901501907747e492152c48f2b0 294 SUPERFAMILY SSF52540 37 289 5.16E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1234 1d7fc7901501907747e492152c48f2b0 294 Hamap MF_02040 Iron-sulfur cluster carrier protein. 30 285 37.146 T 13-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Theam_1234 1d7fc7901501907747e492152c48f2b0 294 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 34 284 8.6E-100 T 13-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Theam_1234 1d7fc7901501907747e492152c48f2b0 294 ProSitePatterns PS01215 Mrp family signature. 147 163 - T 13-10-2018 IPR000808 Mrp, conserved site GO:0005524 Theam_1451 ad582f63a12996f3971982be5a9414fe 94 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 79 92 1.4E-10 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Theam_1451 ad582f63a12996f3971982be5a9414fe 94 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 24 40 1.4E-10 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Theam_1451 ad582f63a12996f3971982be5a9414fe 94 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 58 74 1.4E-10 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Theam_1451 ad582f63a12996f3971982be5a9414fe 94 Pfam PF02049 Flagellar hook-basal body complex protein FliE 16 94 3.1E-23 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Theam_1451 ad582f63a12996f3971982be5a9414fe 94 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 15 94 1.5E-20 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Theam_1451 ad582f63a12996f3971982be5a9414fe 94 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 94 15.279 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Theam_0501 1297e56276429c1b78e667e78656f906 307 Gene3D G3DSA:1.10.20.140 113 179 9.9E-100 T 13-10-2018 Theam_0501 1297e56276429c1b78e667e78656f906 307 Gene3D G3DSA:3.40.50.300 10 280 9.9E-100 T 13-10-2018 Theam_0501 1297e56276429c1b78e667e78656f906 307 SUPERFAMILY SSF52540 6 144 2.13E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0501 1297e56276429c1b78e667e78656f906 307 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 6 295 30.161 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Theam_0501 1297e56276429c1b78e667e78656f906 307 SUPERFAMILY SSF52540 3 300 2.82E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0501 1297e56276429c1b78e667e78656f906 307 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 6 282 2.3E-83 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Theam_0501 1297e56276429c1b78e667e78656f906 307 Pfam PF01715 IPP transferase 39 275 1.5E-75 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Theam_1095 8f5cf3c0fe403a25f54bde7c11dd1a09 304 Pfam PF01063 Amino-transferase class IV 31 263 5.4E-45 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Theam_1095 8f5cf3c0fe403a25f54bde7c11dd1a09 304 ProSitePatterns PS00770 Aminotransferases class-IV signature. 189 218 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Theam_1095 8f5cf3c0fe403a25f54bde7c11dd1a09 304 SUPERFAMILY SSF56752 4 300 7.46E-83 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Theam_1095 8f5cf3c0fe403a25f54bde7c11dd1a09 304 Gene3D G3DSA:3.30.470.10 1 128 5.7E-33 T 13-10-2018 Theam_1095 8f5cf3c0fe403a25f54bde7c11dd1a09 304 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 6 303 2.0E-110 T 13-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 Theam_1095 8f5cf3c0fe403a25f54bde7c11dd1a09 304 Gene3D G3DSA:3.20.10.10 129 302 7.0E-52 T 13-10-2018 Theam_0587 f51d759ee5d2c8c506bd4cfb9c6e2c9e 158 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 17 137 3.3E-29 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Theam_0587 f51d759ee5d2c8c506bd4cfb9c6e2c9e 158 SUPERFAMILY SSF52540 29 116 2.18E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0587 f51d759ee5d2c8c506bd4cfb9c6e2c9e 158 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 15 125 7.6E-31 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Theam_0587 f51d759ee5d2c8c506bd4cfb9c6e2c9e 158 Gene3D G3DSA:3.40.50.300 6 150 3.1E-33 T 13-10-2018 Theam_1611 82bb69813ce7ab738ebbcfb5bc81a560 251 PRINTS PR01021 OMPA domain signature 169 184 1.2E-15 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Theam_1611 82bb69813ce7ab738ebbcfb5bc81a560 251 PRINTS PR01021 OMPA domain signature 184 200 1.2E-15 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Theam_1611 82bb69813ce7ab738ebbcfb5bc81a560 251 PRINTS PR01021 OMPA domain signature 139 161 1.2E-15 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Theam_1611 82bb69813ce7ab738ebbcfb5bc81a560 251 Gene3D G3DSA:3.30.1330.60 111 245 1.1E-42 T 13-10-2018 IPR036737 OmpA-like domain superfamily Theam_1611 82bb69813ce7ab738ebbcfb5bc81a560 251 Pfam PF00691 OmpA family 139 233 1.1E-23 T 13-10-2018 IPR006665 OmpA-like domain Theam_1611 82bb69813ce7ab738ebbcfb5bc81a560 251 Pfam PF13441 YMGG-like Gly-zipper 35 82 1.1E-9 T 13-10-2018 IPR027367 YMGG-like Gly-zipper Theam_1611 82bb69813ce7ab738ebbcfb5bc81a560 251 SUPERFAMILY SSF103088 127 241 8.24E-40 T 13-10-2018 IPR036737 OmpA-like domain superfamily Theam_1519 218856d84e08ba65f284b2ee904f27bb 261 Gene3D G3DSA:1.10.287.1080 5 128 8.7E-46 T 13-10-2018 Theam_1519 218856d84e08ba65f284b2ee904f27bb 261 SUPERFAMILY SSF101386 6 105 1.64E-26 T 13-10-2018 Theam_1519 218856d84e08ba65f284b2ee904f27bb 261 Gene3D G3DSA:1.10.287.1080 131 260 1.3E-48 T 13-10-2018 Theam_1519 218856d84e08ba65f284b2ee904f27bb 261 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 167 226 6.1E-9 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Theam_1519 218856d84e08ba65f284b2ee904f27bb 261 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 30 103 2.3E-30 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Theam_1519 218856d84e08ba65f284b2ee904f27bb 261 TIGRFAM TIGR00444 mazG: MazG family protein 14 257 1.4E-95 T 13-10-2018 IPR011551 NTP pyrophosphohydrolase MazG Theam_1519 218856d84e08ba65f284b2ee904f27bb 261 SUPERFAMILY SSF101386 138 235 1.1E-24 T 13-10-2018 Theam_1345 82409abf454ecec033867d6f5c3290b6 510 SMART SM00220 115 415 0.002 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Theam_1345 82409abf454ecec033867d6f5c3290b6 510 Gene3D G3DSA:1.10.510.10 213 319 2.1E-7 T 13-10-2018 Theam_1345 82409abf454ecec033867d6f5c3290b6 510 Gene3D G3DSA:3.30.200.20 115 165 2.0E-5 T 13-10-2018 Theam_1345 82409abf454ecec033867d6f5c3290b6 510 Pfam PF01636 Phosphotransferase enzyme family 254 300 2.9E-5 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase Theam_1345 82409abf454ecec033867d6f5c3290b6 510 Pfam PF03109 ABC1 family 109 221 1.9E-28 T 13-10-2018 IPR004147 UbiB domain Theam_1345 82409abf454ecec033867d6f5c3290b6 510 SUPERFAMILY SSF56112 91 303 6.57E-28 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Theam_0445 155439438913c1297d47fb75c510d7c8 244 SUPERFAMILY SSF52540 2 235 1.62E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0445 155439438913c1297d47fb75c510d7c8 244 Pfam PF00005 ABC transporter 20 164 1.0E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_0445 155439438913c1297d47fb75c510d7c8 244 SMART SM00382 29 220 5.7E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0445 155439438913c1297d47fb75c510d7c8 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Theam_0445 155439438913c1297d47fb75c510d7c8 244 Gene3D G3DSA:3.40.50.300 3 234 1.9E-59 T 13-10-2018 Theam_1490 28ccbe8699504364e1d86dae73033d4a 609 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 2.9E-48 T 13-10-2018 Theam_1490 28ccbe8699504364e1d86dae73033d4a 609 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 2.9E-48 T 13-10-2018 Theam_1490 28ccbe8699504364e1d86dae73033d4a 609 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 412 431 2.9E-48 T 13-10-2018 Theam_1490 28ccbe8699504364e1d86dae73033d4a 609 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 154 175 2.9E-48 T 13-10-2018 Theam_1490 28ccbe8699504364e1d86dae73033d4a 609 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 221 242 2.9E-48 T 13-10-2018 Theam_1490 28ccbe8699504364e1d86dae73033d4a 609 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 310 322 2.9E-48 T 13-10-2018 Theam_1490 28ccbe8699504364e1d86dae73033d4a 609 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 243 269 2.9E-48 T 13-10-2018 Theam_1490 28ccbe8699504364e1d86dae73033d4a 609 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 62 114 2.0E-16 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1490 28ccbe8699504364e1d86dae73033d4a 609 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 411 433 3.8E-7 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Theam_1490 28ccbe8699504364e1d86dae73033d4a 609 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 55 79 3.8E-7 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Theam_1490 28ccbe8699504364e1d86dae73033d4a 609 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 81 101 3.8E-7 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Theam_1490 28ccbe8699504364e1d86dae73033d4a 609 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 353 375 3.8E-7 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Theam_1490 28ccbe8699504364e1d86dae73033d4a 609 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 5 606 2.0E-152 T 13-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1490 28ccbe8699504364e1d86dae73033d4a 609 Pfam PF00361 Proton-conducting membrane transporter 131 418 5.5E-78 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0691 d0e582f17fdb8db502b0d562b4c9c8f2 194 SUPERFAMILY SSF52218 1 191 1.55E-42 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Theam_0691 d0e582f17fdb8db502b0d562b4c9c8f2 194 Pfam PF03358 NADPH-dependent FMN reductase 1 150 1.2E-35 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Theam_0691 d0e582f17fdb8db502b0d562b4c9c8f2 194 Gene3D G3DSA:3.40.50.360 1 191 8.8E-44 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Theam_1184 a184c33f28f70f0877e61cfe7c5c772a 191 PIRSF PIRSF004553 1 188 3.7E-51 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Theam_1184 a184c33f28f70f0877e61cfe7c5c772a 191 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 184 4.3E-48 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Theam_1184 a184c33f28f70f0877e61cfe7c5c772a 191 Gene3D G3DSA:3.40.50.150 1 189 5.6E-61 T 13-10-2018 Theam_1184 a184c33f28f70f0877e61cfe7c5c772a 191 Pfam PF03602 Conserved hypothetical protein 95 1 184 1.4E-51 T 13-10-2018 Theam_1184 a184c33f28f70f0877e61cfe7c5c772a 191 SUPERFAMILY SSF53335 1 181 7.61E-47 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_1184 a184c33f28f70f0877e61cfe7c5c772a 191 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 122 128 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Theam_0295 8bb54792cffeb1d2edc83eafbb37676c 294 Gene3D G3DSA:3.40.50.1580 2 281 3.0E-75 T 13-10-2018 Theam_0295 8bb54792cffeb1d2edc83eafbb37676c 294 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 2 275 29.833 T 13-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 Theam_0295 8bb54792cffeb1d2edc83eafbb37676c 294 SUPERFAMILY SSF53167 3 271 4.7E-60 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Theam_0295 8bb54792cffeb1d2edc83eafbb37676c 294 Pfam PF01048 Phosphorylase superfamily 4 221 2.6E-35 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Theam_0577 9af743e8245eac875b11f0cfcfd2fd17 295 Pfam PF00483 Nucleotidyl transferase 2 241 1.1E-63 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Theam_0577 9af743e8245eac875b11f0cfcfd2fd17 295 SUPERFAMILY SSF53448 2 291 5.86E-84 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0577 9af743e8245eac875b11f0cfcfd2fd17 295 Gene3D G3DSA:3.90.550.10 1 294 2.9E-84 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0577 9af743e8245eac875b11f0cfcfd2fd17 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 289 4.4E-127 T 13-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Theam_1333 7331a3ee59af1a51d4b53a3face640a1 325 Pfam PF01938 TRAM domain 259 306 1.7E-4 T 13-10-2018 IPR002792 TRAM domain Theam_1333 7331a3ee59af1a51d4b53a3face640a1 325 Gene3D G3DSA:3.40.50.1010 126 258 3.7E-47 T 13-10-2018 Theam_1333 7331a3ee59af1a51d4b53a3face640a1 325 SMART SM00670 127 234 4.2E-7 T 13-10-2018 IPR002716 PIN domain Theam_1333 7331a3ee59af1a51d4b53a3face640a1 325 SUPERFAMILY SSF88723 129 255 1.49E-21 T 13-10-2018 IPR029060 PIN-like domain superfamily Theam_0016 f83e649a110ee1819067e3ad668f5f4f 119 Gene3D G3DSA:3.90.1720.10 2 118 2.4E-21 T 13-10-2018 Theam_0016 f83e649a110ee1819067e3ad668f5f4f 119 Pfam PF00877 NlpC/P60 family 15 112 3.8E-16 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Theam_0016 f83e649a110ee1819067e3ad668f5f4f 119 SUPERFAMILY SSF54001 5 116 4.91E-22 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Theam_1530 bd9f5fd702cf61250b34da01b8d2f8a1 293 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 57 70 - T 13-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 Theam_1530 bd9f5fd702cf61250b34da01b8d2f8a1 293 SUPERFAMILY SSF55120 10 290 5.9E-39 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_1530 bd9f5fd702cf61250b34da01b8d2f8a1 293 Gene3D G3DSA:3.30.2350.20 10 290 1.5E-22 T 13-10-2018 Theam_1530 bd9f5fd702cf61250b34da01b8d2f8a1 293 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 161 289 7.8E-6 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_1530 bd9f5fd702cf61250b34da01b8d2f8a1 293 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 10 118 1.7E-13 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_1530 bd9f5fd702cf61250b34da01b8d2f8a1 293 Gene3D G3DSA:3.30.2340.10 137 260 1.5E-22 T 13-10-2018 Theam_0702 6d75b365c2d8a11f5d47691032e7cb8e 141 SUPERFAMILY SSF55083 1 130 3.79E-34 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Theam_0702 6d75b365c2d8a11f5d47691032e7cb8e 141 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 125 4.6E-24 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Theam_0702 6d75b365c2d8a11f5d47691032e7cb8e 141 Gene3D G3DSA:3.30.70.560 2 136 3.9E-35 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Theam_0702 6d75b365c2d8a11f5d47691032e7cb8e 141 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 123 1.4E-29 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Theam_0181 6f44328fbc78ad68b0b4803dbe7311e9 353 SUPERFAMILY SSF53686 5 345 9.56E-110 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Theam_0181 6f44328fbc78ad68b0b4803dbe7311e9 353 Gene3D G3DSA:3.40.50.1100 62 158 7.8E-133 T 13-10-2018 Theam_0181 6f44328fbc78ad68b0b4803dbe7311e9 353 PIRSF PIRSF038945 1 353 9.4E-173 T 13-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 Theam_0181 6f44328fbc78ad68b0b4803dbe7311e9 353 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Theam_0181 6f44328fbc78ad68b0b4803dbe7311e9 353 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 321 1.5E-75 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Theam_0181 6f44328fbc78ad68b0b4803dbe7311e9 353 TIGRFAM TIGR00260 thrC: threonine synthase 9 328 1.9E-100 T 13-10-2018 IPR004450 Threonine synthase-like Theam_0181 6f44328fbc78ad68b0b4803dbe7311e9 353 Gene3D G3DSA:3.40.50.1100 14 328 7.8E-133 T 13-10-2018 Theam_0472 57da187ef1b6dccc7b889e81b05f4bed 68 SMART SM01234 1 68 4.1E-42 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Theam_0472 57da187ef1b6dccc7b889e81b05f4bed 68 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 66 7.0E-18 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Theam_0472 57da187ef1b6dccc7b889e81b05f4bed 68 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 68 1.0E-29 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Theam_0472 57da187ef1b6dccc7b889e81b05f4bed 68 Pfam PF01809 Haemolytic domain 2 67 2.0E-30 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Theam_0472 57da187ef1b6dccc7b889e81b05f4bed 68 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 68 22.035 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Theam_1139 76a409a2b3fd8955980105d76b6a1f99 352 Pfam PF03600 Citrate transporter 16 276 5.7E-13 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Theam_1050 8fa5ca796651c3e21b02c005b425de83 416 Pfam PF00905 Penicillin binding protein transpeptidase domain 104 378 7.4E-37 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Theam_1050 8fa5ca796651c3e21b02c005b425de83 416 SUPERFAMILY SSF56601 70 407 1.25E-53 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Theam_1050 8fa5ca796651c3e21b02c005b425de83 416 Gene3D G3DSA:3.40.710.10 78 407 1.8E-57 T 13-10-2018 Theam_0096 3ca92a32f15873f0bfcb22ac639fe6cd 262 Pfam PF01925 Sulfite exporter TauE/SafE 8 258 3.3E-44 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Theam_0215 d02c5b6d4687a93fc0d7aaeead25b993 314 Pfam PF00551 Formyl transferase 7 186 3.5E-45 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Theam_0215 d02c5b6d4687a93fc0d7aaeead25b993 314 Gene3D G3DSA:3.40.50.170 2 211 9.5E-88 T 13-10-2018 Theam_0215 d02c5b6d4687a93fc0d7aaeead25b993 314 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 6 306 37.888 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Theam_0215 d02c5b6d4687a93fc0d7aaeead25b993 314 SUPERFAMILY SSF53328 3 208 6.15E-70 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Theam_0215 d02c5b6d4687a93fc0d7aaeead25b993 314 SUPERFAMILY SSF50486 210 310 5.97E-30 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Theam_0215 d02c5b6d4687a93fc0d7aaeead25b993 314 Pfam PF02911 Formyl transferase, C-terminal domain 209 304 3.4E-31 T 13-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Theam_0215 d02c5b6d4687a93fc0d7aaeead25b993 314 Gene3D G3DSA:3.10.25.10 212 314 2.6E-34 T 13-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Theam_0215 d02c5b6d4687a93fc0d7aaeead25b993 314 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 6 309 5.3E-105 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Theam_0806 e4ad82fc7ce39e82a344876125c09bcc 327 SUPERFAMILY SSF48452 214 306 8.91E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0806 e4ad82fc7ce39e82a344876125c09bcc 327 Gene3D G3DSA:1.25.40.10 211 314 1.6E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0144 788b87c72ed85ebe190ccf70baeeeb69 180 SMART SM00507 71 124 9.1E-15 T 13-10-2018 IPR003615 HNH nuclease Theam_0144 788b87c72ed85ebe190ccf70baeeeb69 180 Pfam PF14279 HNH endonuclease 84 138 4.6E-19 T 13-10-2018 IPR029471 HNH endonuclease 5 Theam_0144 788b87c72ed85ebe190ccf70baeeeb69 180 Gene3D G3DSA:3.30.40.60 62 156 4.5E-24 T 13-10-2018 Theam_0498 0c18a39029e9438350d4d5baadadb60f 540 Pfam PF05670 Domain of unknown function (DUF814) 420 501 1.1E-21 T 13-10-2018 IPR008532 Domain of unknown function DUF814 Theam_0498 0c18a39029e9438350d4d5baadadb60f 540 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 68 395 8.7E-48 T 13-10-2018 Theam_0498 0c18a39029e9438350d4d5baadadb60f 540 Gene3D G3DSA:2.30.310.10 1 148 3.8E-14 T 13-10-2018 Theam_1006 303b60ef8350ad89137457659119bf42 161 SUPERFAMILY SSF55729 8 137 1.86E-25 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Theam_1006 303b60ef8350ad89137457659119bf42 161 Pfam PF00583 Acetyltransferase (GNAT) family 43 122 1.1E-16 T 13-10-2018 IPR000182 GNAT domain Theam_1006 303b60ef8350ad89137457659119bf42 161 Gene3D G3DSA:3.40.630.30 7 142 1.9E-36 T 13-10-2018 Theam_1509 1f88401d0a4dc359f71116d1e1dfae17 351 Gene3D G3DSA:3.30.2350.20 267 350 2.1E-6 T 13-10-2018 Theam_1509 1f88401d0a4dc359f71116d1e1dfae17 351 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 2 290 3.3E-34 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_1509 1f88401d0a4dc359f71116d1e1dfae17 351 Gene3D G3DSA:1.10.1510.30 144 223 6.5E-36 T 13-10-2018 Theam_1509 1f88401d0a4dc359f71116d1e1dfae17 351 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 60 73 - T 13-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 Theam_1509 1f88401d0a4dc359f71116d1e1dfae17 351 Gene3D G3DSA:3.30.70.3160 21 103 6.5E-36 T 13-10-2018 Theam_1509 1f88401d0a4dc359f71116d1e1dfae17 351 Gene3D G3DSA:3.30.2350.20 104 247 6.5E-36 T 13-10-2018 Theam_1509 1f88401d0a4dc359f71116d1e1dfae17 351 SUPERFAMILY SSF55120 2 348 1.44E-43 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Theam_0236 d0044f5522391b72b2be9caa47603fd2 371 SUPERFAMILY SSF51905 2 328 1.6E-34 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0236 d0044f5522391b72b2be9caa47603fd2 371 Gene3D G3DSA:3.50.50.60 1 359 1.2E-62 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Theam_0236 d0044f5522391b72b2be9caa47603fd2 371 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 3 286 1.4E-55 T 13-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 Theam_0236 d0044f5522391b72b2be9caa47603fd2 371 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 3.0E-8 T 13-10-2018 Theam_0236 d0044f5522391b72b2be9caa47603fd2 371 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 251 266 3.0E-8 T 13-10-2018 Theam_0236 d0044f5522391b72b2be9caa47603fd2 371 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 140 155 3.0E-8 T 13-10-2018 Theam_1085 e1bf8f150435d1c364338e2cbe52effa 254 Pfam PF00691 OmpA family 110 212 1.9E-21 T 13-10-2018 IPR006665 OmpA-like domain Theam_1085 e1bf8f150435d1c364338e2cbe52effa 254 SUPERFAMILY SSF103088 83 218 2.35E-30 T 13-10-2018 IPR036737 OmpA-like domain superfamily Theam_1085 e1bf8f150435d1c364338e2cbe52effa 254 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 53 6.1E-16 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain Theam_1085 e1bf8f150435d1c364338e2cbe52effa 254 Gene3D G3DSA:3.30.1330.60 67 229 1.6E-35 T 13-10-2018 IPR036737 OmpA-like domain superfamily Theam_0731 ba5dba9cf093c4a16638db4ef92d0545 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 16.855 T 13-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 Theam_0731 ba5dba9cf093c4a16638db4ef92d0545 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 26 120 9.9E-30 T 13-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0731 ba5dba9cf093c4a16638db4ef92d0545 121 Gene3D G3DSA:1.20.58.1610 2 121 3.6E-34 T 13-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0325 5e61342734ab521cdd2a31d4890a9187 223 Gene3D G3DSA:1.10.10.10 124 223 8.7E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0325 5e61342734ab521cdd2a31d4890a9187 223 SUPERFAMILY SSF46894 125 220 5.1E-27 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Theam_0325 5e61342734ab521cdd2a31d4890a9187 223 SUPERFAMILY SSF52172 1 124 1.17E-42 T 13-10-2018 IPR011006 CheY-like superfamily Theam_0325 5e61342734ab521cdd2a31d4890a9187 223 SMART SM00448 2 115 4.8E-47 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_0325 5e61342734ab521cdd2a31d4890a9187 223 Pfam PF00072 Response regulator receiver domain 4 116 1.6E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Theam_0325 5e61342734ab521cdd2a31d4890a9187 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 1.6E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Theam_0325 5e61342734ab521cdd2a31d4890a9187 223 SMART SM00862 146 219 6.5E-27 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Theam_0325 5e61342734ab521cdd2a31d4890a9187 223 Gene3D G3DSA:3.40.50.2300 1 123 8.1E-42 T 13-10-2018 Theam_1675 b6fce8286e25abdc386e5b7b3fa6d990 127 Gene3D G3DSA:3.10.490.10 3 119 4.3E-32 T 13-10-2018 Theam_1675 b6fce8286e25abdc386e5b7b3fa6d990 127 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 10 109 5.4E-23 T 13-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like Theam_1675 b6fce8286e25abdc386e5b7b3fa6d990 127 SUPERFAMILY SSF110857 9 110 3.27E-27 T 13-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily Theam_0028 e451eea39185a9c5648bf6bd9ebc44a1 214 SUPERFAMILY SSF52540 56 185 3.55E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0028 e451eea39185a9c5648bf6bd9ebc44a1 214 Gene3D G3DSA:3.40.50.300 53 212 1.3E-15 T 13-10-2018 Theam_0760 6004bab93f59738ed8818537b8de055c 80 Pfam PF11146 Protein of unknown function (DUF2905) 6 72 9.1E-23 T 13-10-2018 IPR021320 Protein of unknown function DUF2905 Theam_0807 50180f94b9308b826a38c83290e362c1 495 Pfam PF11997 Domain of unknown function (DUF3492) 5 279 5.5E-76 T 13-10-2018 IPR022622 Domain of unknown function DUF3492 Theam_0807 50180f94b9308b826a38c83290e362c1 495 Pfam PF00534 Glycosyl transferases group 1 300 467 1.5E-23 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Theam_0807 50180f94b9308b826a38c83290e362c1 495 Gene3D G3DSA:3.40.50.2000 288 474 1.0E-47 T 13-10-2018 Theam_0807 50180f94b9308b826a38c83290e362c1 495 SUPERFAMILY SSF53756 6 489 2.2E-62 T 13-10-2018 Theam_0807 50180f94b9308b826a38c83290e362c1 495 Gene3D G3DSA:3.40.50.2000 172 487 1.0E-47 T 13-10-2018 Theam_1658 71176cfd515554883e2905e669620c00 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 3.1E-21 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1658 71176cfd515554883e2905e669620c00 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 3.1E-21 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1658 71176cfd515554883e2905e669620c00 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 3.1E-21 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1658 71176cfd515554883e2905e669620c00 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.1E-21 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1658 71176cfd515554883e2905e669620c00 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 3.1E-21 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1658 71176cfd515554883e2905e669620c00 177 SUPERFAMILY SSF47928 6 103 2.09E-17 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1658 71176cfd515554883e2905e669620c00 177 Gene3D G3DSA:1.10.520.20 7 98 4.2E-12 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1658 71176cfd515554883e2905e669620c00 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 4.4E-45 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1658 71176cfd515554883e2905e669620c00 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 20.358 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_1658 71176cfd515554883e2905e669620c00 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 173 1.2E-31 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Theam_0883 d5c798644ae6934283b1ccf7a7f3b216 230 SUPERFAMILY SSF52540 3 229 2.13E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0883 d5c798644ae6934283b1ccf7a7f3b216 230 SMART SM00382 32 226 1.9E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0883 d5c798644ae6934283b1ccf7a7f3b216 230 Gene3D G3DSA:3.40.50.300 1 230 1.1E-68 T 13-10-2018 Theam_0883 d5c798644ae6934283b1ccf7a7f3b216 230 Pfam PF00005 ABC transporter 23 178 1.4E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_1287 dec9c7b5a2057261c06fe13bdb666856 168 Hamap MF_00109 Shikimate kinase [aroK]. 1 164 25.246 T 13-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Theam_1287 dec9c7b5a2057261c06fe13bdb666856 168 Gene3D G3DSA:3.40.50.300 2 168 1.1E-56 T 13-10-2018 Theam_1287 dec9c7b5a2057261c06fe13bdb666856 168 Pfam PF01202 Shikimate kinase 9 163 2.2E-44 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Theam_1287 dec9c7b5a2057261c06fe13bdb666856 168 SUPERFAMILY SSF52540 3 166 5.09E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1287 dec9c7b5a2057261c06fe13bdb666856 168 PRINTS PR01100 Shikimate kinase family signature 74 83 1.0E-21 T 13-10-2018 Theam_1287 dec9c7b5a2057261c06fe13bdb666856 168 PRINTS PR01100 Shikimate kinase family signature 55 63 1.0E-21 T 13-10-2018 Theam_1287 dec9c7b5a2057261c06fe13bdb666856 168 PRINTS PR01100 Shikimate kinase family signature 95 112 1.0E-21 T 13-10-2018 Theam_1287 dec9c7b5a2057261c06fe13bdb666856 168 PRINTS PR01100 Shikimate kinase family signature 3 18 1.0E-21 T 13-10-2018 Theam_1287 dec9c7b5a2057261c06fe13bdb666856 168 PRINTS PR01100 Shikimate kinase family signature 27 40 1.0E-21 T 13-10-2018 Theam_1390 33098ac225cdc376443944b9cba01dca 193 Pfam PF04670 Gtr1/RagA G protein conserved region 14 131 1.8E-7 T 13-10-2018 IPR006762 Gtr1/RagA G protein GO:0005525 Reactome: R-HSA-1632852|Reactome: R-HSA-165159|Reactome: R-HSA-166208|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-8943724 Theam_1390 33098ac225cdc376443944b9cba01dca 193 SUPERFAMILY SSF52540 10 191 1.6E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1390 33098ac225cdc376443944b9cba01dca 193 PRINTS PR00449 Transforming protein P21 ras signature 13 34 4.8E-6 T 13-10-2018 Theam_1390 33098ac225cdc376443944b9cba01dca 193 PRINTS PR00449 Transforming protein P21 ras signature 132 145 4.8E-6 T 13-10-2018 Theam_1390 33098ac225cdc376443944b9cba01dca 193 PRINTS PR00449 Transforming protein P21 ras signature 165 187 4.8E-6 T 13-10-2018 Theam_1390 33098ac225cdc376443944b9cba01dca 193 PRINTS PR00449 Transforming protein P21 ras signature 65 87 4.8E-6 T 13-10-2018 Theam_1390 33098ac225cdc376443944b9cba01dca 193 Gene3D G3DSA:3.40.50.300 1 193 2.1E-83 T 13-10-2018 Theam_0126 3512ca455da9b73f7959c16601dcdcae 227 Pfam PF04338 Protein of unknown function, DUF481 23 227 1.3E-33 T 13-10-2018 IPR007433 Protein of unknown function DUF481 Theam_1009 51c2ddda6cab36f6690456790d7876ba 260 Pfam PF02405 Permease MlaE 44 253 7.5E-78 T 13-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Theam_1009 51c2ddda6cab36f6690456790d7876ba 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 21 255 1.2E-81 T 13-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Theam_1680 ac0139cb2264467241d35be4b8fd10de 151 Pfam PF02631 RecX family 31 145 6.6E-22 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Theam_1680 ac0139cb2264467241d35be4b8fd10de 151 Hamap MF_01114 Regulatory protein RecX [recX]. 3 150 11.796 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Theam_1680 ac0139cb2264467241d35be4b8fd10de 151 Gene3D G3DSA:1.10.10.10 101 148 2.7E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_1680 ac0139cb2264467241d35be4b8fd10de 151 Gene3D G3DSA:1.10.10.10 55 94 2.4E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0634 a93782bbe554077385be355a9451bf97 192 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 183 1.0E-33 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal Theam_0634 a93782bbe554077385be355a9451bf97 192 SUPERFAMILY SSF53639 7 189 4.51E-42 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Theam_0634 a93782bbe554077385be355a9451bf97 192 Gene3D G3DSA:3.40.225.10 5 192 5.2E-48 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Theam_0634 a93782bbe554077385be355a9451bf97 192 SMART SM01007 10 184 4.8E-38 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal Theam_1481 26dd2cd21cbd0e30f27e3581e8846c90 233 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 2 231 18.034 T 13-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 Theam_1481 26dd2cd21cbd0e30f27e3581e8846c90 233 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 112 228 5.9E-39 T 13-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal Theam_1481 26dd2cd21cbd0e30f27e3581e8846c90 233 SMART SM00028 185 218 0.19 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1481 26dd2cd21cbd0e30f27e3581e8846c90 233 SMART SM00028 148 181 6.6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1481 26dd2cd21cbd0e30f27e3581e8846c90 233 SMART SM00028 111 144 12.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1481 26dd2cd21cbd0e30f27e3581e8846c90 233 Gene3D G3DSA:1.25.40.10 111 233 9.9E-38 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1481 26dd2cd21cbd0e30f27e3581e8846c90 233 Gene3D G3DSA:1.20.5.340 19 94 8.5E-8 T 13-10-2018 Theam_1481 26dd2cd21cbd0e30f27e3581e8846c90 233 Pfam PF13525 Outer membrane lipoprotein 111 228 9.4E-12 T 13-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Theam_1481 26dd2cd21cbd0e30f27e3581e8846c90 233 SUPERFAMILY SSF48452 111 228 9.93E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0129 70d92e41f3c245bcbc1a656906d53e2c 99 SUPERFAMILY SSF47729 1 90 5.59E-34 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Theam_0129 70d92e41f3c245bcbc1a656906d53e2c 99 Pfam PF00216 Bacterial DNA-binding protein 1 88 2.5E-35 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Theam_0129 70d92e41f3c245bcbc1a656906d53e2c 99 Gene3D G3DSA:4.10.520.10 1 93 6.1E-36 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Theam_0129 70d92e41f3c245bcbc1a656906d53e2c 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Theam_0129 70d92e41f3c245bcbc1a656906d53e2c 99 SMART SM00411 1 90 4.3E-42 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Theam_0129 70d92e41f3c245bcbc1a656906d53e2c 99 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.0E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Theam_0129 70d92e41f3c245bcbc1a656906d53e2c 99 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.0E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Theam_0129 70d92e41f3c245bcbc1a656906d53e2c 99 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.0E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Theam_0759 417890dabf7efec54272bf5ce6f0f3b7 400 Gene3D G3DSA:3.10.20.310 15 93 8.6E-17 T 13-10-2018 Theam_0759 417890dabf7efec54272bf5ce6f0f3b7 400 Pfam PF07244 Surface antigen variable number repeat 22 93 3.0E-8 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Theam_1316 d6f26c5a3a9498df4126f7b716ec59bb 249 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Theam_1316 d6f26c5a3a9498df4126f7b716ec59bb 249 Pfam PF05175 Methyltransferase small domain 31 143 4.3E-14 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Theam_1316 d6f26c5a3a9498df4126f7b716ec59bb 249 SUPERFAMILY SSF53335 7 196 3.47E-31 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_1316 d6f26c5a3a9498df4126f7b716ec59bb 249 Gene3D G3DSA:3.40.50.150 6 246 1.8E-61 T 13-10-2018 Theam_1488 f600fd7295a3de2bcc86768aea91028f 471 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 1 459 15.496 T 13-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Theam_1488 f600fd7295a3de2bcc86768aea91028f 471 Pfam PF00361 Proton-conducting membrane transporter 116 405 9.2E-61 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1251 0f6d4126a9ea26a1d61aa16688dc60ab 177 Gene3D G3DSA:3.30.910.20 21 177 1.1E-26 T 13-10-2018 IPR024930 Skp domain superfamily Theam_1251 0f6d4126a9ea26a1d61aa16688dc60ab 177 SUPERFAMILY SSF111384 32 172 3.53E-22 T 13-10-2018 Theam_1251 0f6d4126a9ea26a1d61aa16688dc60ab 177 Pfam PF03938 Outer membrane protein (OmpH-like) 19 169 1.3E-27 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Theam_1251 0f6d4126a9ea26a1d61aa16688dc60ab 177 SMART SM00935 17 172 1.1E-26 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Theam_0649 7c9bf0ec1e2126be7497125db35ed029 502 Gene3D G3DSA:1.10.246.130 233 304 1.0E-5 T 13-10-2018 Theam_0649 7c9bf0ec1e2126be7497125db35ed029 502 SUPERFAMILY SSF56235 2 500 1.02E-115 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Theam_0649 7c9bf0ec1e2126be7497125db35ed029 502 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 406 423 3.1E-55 T 13-10-2018 Theam_0649 7c9bf0ec1e2126be7497125db35ed029 502 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 25 50 3.1E-55 T 13-10-2018 Theam_0649 7c9bf0ec1e2126be7497125db35ed029 502 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 351 369 3.1E-55 T 13-10-2018 Theam_0649 7c9bf0ec1e2126be7497125db35ed029 502 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 329 347 3.1E-55 T 13-10-2018 Theam_0649 7c9bf0ec1e2126be7497125db35ed029 502 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 247 266 3.1E-55 T 13-10-2018 Theam_0649 7c9bf0ec1e2126be7497125db35ed029 502 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 382 397 3.1E-55 T 13-10-2018 Theam_0649 7c9bf0ec1e2126be7497125db35ed029 502 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 101 119 3.1E-55 T 13-10-2018 Theam_0649 7c9bf0ec1e2126be7497125db35ed029 502 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 217 233 3.1E-55 T 13-10-2018 Theam_0649 7c9bf0ec1e2126be7497125db35ed029 502 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 119 138 3.1E-55 T 13-10-2018 Theam_0649 7c9bf0ec1e2126be7497125db35ed029 502 Gene3D G3DSA:3.60.20.40 329 500 6.3E-39 T 13-10-2018 Theam_0649 7c9bf0ec1e2126be7497125db35ed029 502 Pfam PF01019 Gamma-glutamyltranspeptidase 18 496 1.3E-100 T 13-10-2018 Theam_0397 a562c178e449342d8ecf0a70d10e4aba 213 Gene3D G3DSA:3.40.1050.10 37 166 1.2E-7 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Theam_0397 a562c178e449342d8ecf0a70d10e4aba 213 SUPERFAMILY SSF53056 44 163 9.29E-8 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Theam_0397 a562c178e449342d8ecf0a70d10e4aba 213 SMART SM00947 37 173 0.0047 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Theam_0397 a562c178e449342d8ecf0a70d10e4aba 213 Pfam PF00484 Carbonic anhydrase 44 163 9.0E-8 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Theam_1096 a77d3509718aeefb605063988b26eb1a 474 Gene3D G3DSA:3.30.420.480 83 252 2.9E-30 T 13-10-2018 Theam_1096 a77d3509718aeefb605063988b26eb1a 474 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 2 45 1.7E-5 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Theam_1096 a77d3509718aeefb605063988b26eb1a 474 Pfam PF14574 Domain of unknown function (DUF4445) 84 472 7.2E-89 T 13-10-2018 IPR027980 Protein of unknown function DUF4445 Theam_1096 a77d3509718aeefb605063988b26eb1a 474 SUPERFAMILY SSF54292 3 60 2.88E-9 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Theam_1096 a77d3509718aeefb605063988b26eb1a 474 Gene3D G3DSA:3.10.20.30 2 66 1.3E-8 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Theam_1426 73f185c36dab63620358948d316c3b2f 832 SUPERFAMILY SSF56317 592 767 3.01E-6 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Theam_1426 73f185c36dab63620358948d316c3b2f 832 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 6 119 8.5E-11 T 13-10-2018 IPR000477 Reverse transcriptase domain Theam_1263 a3ee4fac513d8e49bccf9ca265f84900 153 Pfam PF13664 Domain of unknown function (DUF4149) 12 103 3.0E-15 T 13-10-2018 IPR025423 Domain of unknown function DUF4149 Theam_0353 2bc15e93529b40f53d1dcfda324e1995 92 SUPERFAMILY SSF54975 4 91 3.27E-30 T 13-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Theam_0353 2bc15e93529b40f53d1dcfda324e1995 92 Gene3D G3DSA:3.30.70.100 1 90 2.6E-33 T 13-10-2018 Theam_0353 2bc15e93529b40f53d1dcfda324e1995 92 PRINTS PR00112 Acylphosphatase signature 26 51 7.3E-5 T 13-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Theam_0353 2bc15e93529b40f53d1dcfda324e1995 92 PRINTS PR00112 Acylphosphatase signature 5 20 7.3E-5 T 13-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Theam_0353 2bc15e93529b40f53d1dcfda324e1995 92 Pfam PF00708 Acylphosphatase 7 90 8.0E-29 T 13-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Theam_0353 2bc15e93529b40f53d1dcfda324e1995 92 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Theam_1284 e028097351eebfd7c6c8a13269ac2b4f 148 SUPERFAMILY SSF102405 2 132 5.95E-34 T 13-10-2018 Theam_1284 e028097351eebfd7c6c8a13269ac2b4f 148 Pfam PF03641 Possible lysine decarboxylase 45 144 1.2E-6 T 13-10-2018 IPR031100 LOG family Theam_1284 e028097351eebfd7c6c8a13269ac2b4f 148 Gene3D G3DSA:3.40.50.450 1 147 1.8E-37 T 13-10-2018 Theam_1284 e028097351eebfd7c6c8a13269ac2b4f 148 TIGRFAM TIGR00725 TIGR00725: TIGR00725 family protein 2 125 2.2E-41 T 13-10-2018 IPR005268 Conserved hypothetical protein CHP00725 Theam_0100 5b92e7bee35b5d0b9a2e68c3ea819ead 120 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 5 103 7.8E-21 T 13-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA Theam_0100 5b92e7bee35b5d0b9a2e68c3ea819ead 120 SUPERFAMILY SSF158622 4 105 1.23E-21 T 13-10-2018 IPR023378 YheA/YmcA-like domain superfamily Theam_0100 5b92e7bee35b5d0b9a2e68c3ea819ead 120 Gene3D G3DSA:1.20.1500.10 1 109 1.0E-24 T 13-10-2018 IPR023378 YheA/YmcA-like domain superfamily Theam_1441 4f1fbe18a1a98600c1c3a042fc77b6f6 259 Pfam PF01311 Bacterial export proteins, family 1 13 243 5.1E-52 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Theam_1441 4f1fbe18a1a98600c1c3a042fc77b6f6 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 8.9E-19 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Theam_1441 4f1fbe18a1a98600c1c3a042fc77b6f6 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 79 98 8.9E-19 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Theam_1441 4f1fbe18a1a98600c1c3a042fc77b6f6 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 200 219 8.9E-19 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Theam_1441 4f1fbe18a1a98600c1c3a042fc77b6f6 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 178 200 8.9E-19 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Theam_0632 bb8bc5c65f3760fa299ce72d7c686838 823 SUPERFAMILY SSF52540 243 453 1.14E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0632 bb8bc5c65f3760fa299ce72d7c686838 823 Pfam PF12705 PD-(D/E)XK nuclease superfamily 571 723 6.3E-13 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Theam_1351 a15d0069609ddc29272d7a5d02460c83 178 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 24 5.1E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1351 a15d0069609ddc29272d7a5d02460c83 178 SUPERFAMILY SSF54523 6 81 1.88E-10 T 13-10-2018 Theam_1351 a15d0069609ddc29272d7a5d02460c83 178 Gene3D G3DSA:3.30.700.10 6 130 3.0E-10 T 13-10-2018 Theam_1351 a15d0069609ddc29272d7a5d02460c83 178 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 1.6E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_0370 f2c7f8e48786a7de2fdc178fb9da2e93 57 Gene3D G3DSA:3.30.50.10 1 57 2.3E-20 T 13-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 Theam_0370 f2c7f8e48786a7de2fdc178fb9da2e93 57 Pfam PF03884 DNA gyrase inhibitor YacG 4 49 5.4E-20 T 13-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 Theam_0370 f2c7f8e48786a7de2fdc178fb9da2e93 57 SUPERFAMILY SSF57716 3 46 1.33E-15 T 13-10-2018 Theam_0370 f2c7f8e48786a7de2fdc178fb9da2e93 57 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 56 14.582 T 13-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 Theam_1288 3cedf918ad6dd5803c376cfd9f828907 298 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 9 285 3.0E-31 T 13-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Theam_0892 a6c76ea4b6c87a32fdf07dd72fbf0d6a 269 SUPERFAMILY SSF143597 39 235 3.53E-64 T 13-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Theam_0892 a6c76ea4b6c87a32fdf07dd72fbf0d6a 269 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 9 245 1.5E-77 T 13-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 Theam_0892 a6c76ea4b6c87a32fdf07dd72fbf0d6a 269 Hamap MF_01499 Diadenylate cyclase [dacA]. 9 249 33.616 T 13-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 Theam_0892 a6c76ea4b6c87a32fdf07dd72fbf0d6a 269 Gene3D G3DSA:3.40.1700.10 97 250 1.1E-60 T 13-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Theam_0892 a6c76ea4b6c87a32fdf07dd72fbf0d6a 269 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 113 231 1.6E-41 T 13-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal Theam_0892 a6c76ea4b6c87a32fdf07dd72fbf0d6a 269 PIRSF PIRSF004793 5 261 1.0E-88 T 13-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 Theam_0670 3589000e4d82f174c7ace72f5313515a 421 TIGRFAM TIGR04370 glyco_rpt_poly: oligosaccharide repeat unit polymerase 35 400 4.0E-29 T 13-10-2018 Theam_1240 f54d0fba8a2d5ea3cbae54350fd15a4b 127 SUPERFAMILY SSF54637 14 118 6.68E-27 T 13-10-2018 IPR029069 HotDog domain superfamily Theam_1240 f54d0fba8a2d5ea3cbae54350fd15a4b 127 Pfam PF03061 Thioesterase superfamily 41 111 3.4E-10 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Theam_1240 f54d0fba8a2d5ea3cbae54350fd15a4b 127 Gene3D G3DSA:3.10.129.10 1 127 2.0E-44 T 13-10-2018 Theam_1656 13d0c1e201b8152250f3deaead6858d3 145 Pfam PF00430 ATP synthase B/B' CF(0) 11 141 2.4E-24 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Theam_1656 13d0c1e201b8152250f3deaead6858d3 145 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 15 143 6.2E-20 T 13-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Theam_1656 13d0c1e201b8152250f3deaead6858d3 145 Hamap MF_01398 ATP synthase subunit b [atpF]. 3 143 12.478 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Theam_0622 6823a61e9585d5949e1ec7c1dae1ad68 173 PIRSF PIRSF005785 6 171 1.0E-42 T 13-10-2018 IPR012091 Peptidase M54, archaemetzincin, archaeal/bacterial GO:0006508|GO:0008237|GO:0008270 Theam_0622 6823a61e9585d5949e1ec7c1dae1ad68 173 Gene3D G3DSA:3.40.390.10 9 169 6.2E-43 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Theam_0622 6823a61e9585d5949e1ec7c1dae1ad68 173 Pfam PF07998 Peptidase family M54 70 165 6.3E-26 T 13-10-2018 IPR012962 Peptidase M54, archaemetzincin GO:0008270 Theam_0622 6823a61e9585d5949e1ec7c1dae1ad68 173 SUPERFAMILY SSF55486 63 159 2.02E-16 T 13-10-2018 Theam_1248 0a66fac29e432e8b91bb70cdd522d73e 283 Gene3D G3DSA:3.20.20.70 34 182 8.1E-13 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1248 0a66fac29e432e8b91bb70cdd522d73e 283 Pfam PF03537 Glycoside-hydrolase family GH114 48 269 2.7E-70 T 13-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain Theam_1248 0a66fac29e432e8b91bb70cdd522d73e 283 SUPERFAMILY SSF51445 55 241 2.11E-41 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Theam_0378 d065ef8e01d843d8d7fdf9061b1e50de 136 SUPERFAMILY SSF54211 6 136 2.58E-42 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Theam_0378 d065ef8e01d843d8d7fdf9061b1e50de 136 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 136 31.072 T 13-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Theam_0378 d065ef8e01d843d8d7fdf9061b1e50de 136 Gene3D G3DSA:3.30.230.10 1 136 8.2E-47 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Theam_0378 d065ef8e01d843d8d7fdf9061b1e50de 136 Pfam PF00380 Ribosomal protein S9/S16 10 136 2.7E-43 T 13-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Theam_0378 d065ef8e01d843d8d7fdf9061b1e50de 136 ProSitePatterns PS00360 Ribosomal protein S9 signature. 75 93 - T 13-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Theam_0928 f5dcd5295d8d1872abafbe91873635ca 555 Gene3D G3DSA:3.40.50.300 32 266 2.6E-32 T 13-10-2018 Theam_0928 f5dcd5295d8d1872abafbe91873635ca 555 SUPERFAMILY SSF52540 29 234 7.92E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0928 f5dcd5295d8d1872abafbe91873635ca 555 Pfam PF00350 Dynamin family 32 189 1.0E-19 T 13-10-2018 IPR022812 Dynamin superfamily Theam_0243 a2fb76b3f49736056daf637378a245ac 100 TIGRFAM TIGR02579 cas_csx3: CRISPR-associated protein, Csx3 family 15 95 3.0E-26 T 13-10-2018 IPR013409 CRISPR-associated protein Csx3 Theam_0243 a2fb76b3f49736056daf637378a245ac 100 Pfam PF09620 CRISPR-associated protein (Cas_csx3) 23 94 1.2E-26 T 13-10-2018 IPR013409 CRISPR-associated protein Csx3 Theam_1073 5f25ea62bcc1a4197eb2920d1fbca2dc 423 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 68 181 2.1E-19 T 13-10-2018 IPR006528 Phage head morphogenesis domain Theam_1073 5f25ea62bcc1a4197eb2920d1fbca2dc 423 Pfam PF04233 Phage Mu protein F like protein 65 180 3.0E-24 T 13-10-2018 IPR006528 Phage head morphogenesis domain Theam_1164 09a29d477a3238b35df1ae5995502d1b 284 Gene3D G3DSA:3.40.50.300 20 216 2.3E-5 T 13-10-2018 Theam_1164 09a29d477a3238b35df1ae5995502d1b 284 SUPERFAMILY SSF52540 26 275 4.18E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1440 b154b5d8674a964f8588bf6ae87e6fc2 347 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 339 6.6E-125 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Theam_1440 b154b5d8674a964f8588bf6ae87e6fc2 347 SUPERFAMILY SSF160544 237 344 3.53E-42 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Theam_1440 b154b5d8674a964f8588bf6ae87e6fc2 347 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 6 344 5.3E-122 T 13-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 Theam_1440 b154b5d8674a964f8588bf6ae87e6fc2 347 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 8 30 2.5E-40 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Theam_1440 b154b5d8674a964f8588bf6ae87e6fc2 347 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 201 219 2.5E-40 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Theam_1440 b154b5d8674a964f8588bf6ae87e6fc2 347 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 265 280 2.5E-40 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Theam_1440 b154b5d8674a964f8588bf6ae87e6fc2 347 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 295 316 2.5E-40 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Theam_1440 b154b5d8674a964f8588bf6ae87e6fc2 347 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 221 238 2.5E-40 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Theam_1440 b154b5d8674a964f8588bf6ae87e6fc2 347 Gene3D G3DSA:3.40.1690.10 211 346 3.9E-56 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Theam_0999 fdf8cb088da68af56f08254b99e93afe 150 Pfam PF13247 4Fe-4S dicluster domain 59 145 2.4E-13 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Theam_0999 fdf8cb088da68af56f08254b99e93afe 150 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 95 106 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Theam_0999 fdf8cb088da68af56f08254b99e93afe 150 SUPERFAMILY SSF54862 14 145 1.34E-34 T 13-10-2018 Theam_0999 fdf8cb088da68af56f08254b99e93afe 150 Gene3D G3DSA:3.30.70.20 28 149 9.3E-26 T 13-10-2018 Theam_1618 7a813ad201ae62180149081ca7aefbb9 245 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 4 140 4.5E-9 T 13-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 Theam_1618 7a813ad201ae62180149081ca7aefbb9 245 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 3 41 5.0E-11 T 13-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal Theam_1052 c4b7a91dab6956ea0e031d44b8cd5f6a 226 Gene3D G3DSA:3.40.50.150 4 208 6.6E-34 T 13-10-2018 Theam_1052 c4b7a91dab6956ea0e031d44b8cd5f6a 226 SUPERFAMILY SSF53335 6 177 1.24E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_1052 c4b7a91dab6956ea0e031d44b8cd5f6a 226 Pfam PF08241 Methyltransferase domain 46 129 4.2E-15 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Theam_0607 d87bec280059d9e933c06caafcca7485 358 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 347 1.1E-48 T 13-10-2018 IPR000160 GGDEF domain Theam_0607 d87bec280059d9e933c06caafcca7485 358 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 189 349 2.1E-53 T 13-10-2018 IPR000160 GGDEF domain Theam_0607 d87bec280059d9e933c06caafcca7485 358 SUPERFAMILY SSF55073 196 348 1.8E-52 T 13-10-2018 IPR029787 Nucleotide cyclase Theam_0607 d87bec280059d9e933c06caafcca7485 358 SMART SM00267 180 351 5.0E-64 T 13-10-2018 IPR000160 GGDEF domain Theam_0607 d87bec280059d9e933c06caafcca7485 358 Gene3D G3DSA:3.30.70.270 180 351 5.6E-59 T 13-10-2018 Theam_0690 9418d3066dc86fc2626bfacced5a56fa 248 Pfam PF01904 Protein of unknown function DUF72 19 230 1.9E-45 T 13-10-2018 IPR002763 Protein of unknown function DUF72 Theam_0690 9418d3066dc86fc2626bfacced5a56fa 248 SUPERFAMILY SSF117396 2 232 2.88E-53 T 13-10-2018 IPR036520 UPF0759 superfamily Theam_0690 9418d3066dc86fc2626bfacced5a56fa 248 Gene3D G3DSA:3.20.20.410 1 235 1.8E-58 T 13-10-2018 IPR036520 UPF0759 superfamily Theam_1590 85035cc7c154fe5e3986ef2e147de91c 190 Gene3D G3DSA:2.30.30.240 113 190 2.6E-19 T 13-10-2018 Theam_1590 85035cc7c154fe5e3986ef2e147de91c 190 Gene3D G3DSA:2.40.30.60 24 110 5.4E-21 T 13-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Theam_1590 85035cc7c154fe5e3986ef2e147de91c 190 SUPERFAMILY SSF50447 25 109 7.42E-18 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Theam_1590 85035cc7c154fe5e3986ef2e147de91c 190 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 25 187 9.6E-47 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Theam_1590 85035cc7c154fe5e3986ef2e147de91c 190 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 24 188 24.468 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Theam_1590 85035cc7c154fe5e3986ef2e147de91c 190 Pfam PF01782 RimM N-terminal domain 27 108 3.9E-19 T 13-10-2018 IPR002676 RimM, N-terminal GO:0006364 Theam_1590 85035cc7c154fe5e3986ef2e147de91c 190 Pfam PF05239 PRC-barrel domain 115 187 8.0E-13 T 13-10-2018 IPR027275 PRC-barrel domain Theam_1590 85035cc7c154fe5e3986ef2e147de91c 190 SUPERFAMILY SSF50346 118 187 4.55E-19 T 13-10-2018 IPR011033 PRC-barrel-like superfamily Theam_1363 c3889118fc7a64958a6e490d794ff8b7 265 Gene3D G3DSA:1.25.40.10 34 80 1.5E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1363 c3889118fc7a64958a6e490d794ff8b7 265 SMART SM00028 45 78 1.9E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1363 c3889118fc7a64958a6e490d794ff8b7 265 SMART SM00028 217 250 34.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1363 c3889118fc7a64958a6e490d794ff8b7 265 SMART SM00028 79 112 5.5E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1363 c3889118fc7a64958a6e490d794ff8b7 265 SMART SM00028 113 146 0.013 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1363 c3889118fc7a64958a6e490d794ff8b7 265 SMART SM00028 149 182 46.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1363 c3889118fc7a64958a6e490d794ff8b7 265 SMART SM00028 183 216 9.5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1363 c3889118fc7a64958a6e490d794ff8b7 265 Pfam PF13181 Tetratricopeptide repeat 220 249 1.3E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1363 c3889118fc7a64958a6e490d794ff8b7 265 Pfam PF13181 Tetratricopeptide repeat 45 78 0.0021 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1363 c3889118fc7a64958a6e490d794ff8b7 265 Gene3D G3DSA:1.25.40.10 81 144 6.1E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1363 c3889118fc7a64958a6e490d794ff8b7 265 Pfam PF13414 TPR repeat 86 127 8.4E-9 T 13-10-2018 Theam_1363 c3889118fc7a64958a6e490d794ff8b7 265 Gene3D G3DSA:1.25.40.10 145 265 4.3E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1363 c3889118fc7a64958a6e490d794ff8b7 265 Pfam PF13174 Tetratricopeptide repeat 189 215 0.042 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1363 c3889118fc7a64958a6e490d794ff8b7 265 SUPERFAMILY SSF81901 48 252 8.11E-32 T 13-10-2018 Theam_1231 afe06360f1860e748d89000da2dfcb77 544 SUPERFAMILY SSF48452 75 195 1.37E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1231 afe06360f1860e748d89000da2dfcb77 544 SUPERFAMILY SSF53955 398 536 1.73E-34 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Theam_1231 afe06360f1860e748d89000da2dfcb77 544 Pfam PF01464 Transglycosylase SLT domain 399 491 2.7E-23 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Theam_1231 afe06360f1860e748d89000da2dfcb77 544 Gene3D G3DSA:1.10.530.10 396 540 3.4E-35 T 13-10-2018 Theam_1231 afe06360f1860e748d89000da2dfcb77 544 Gene3D G3DSA:1.25.40.10 59 273 2.7E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1231 afe06360f1860e748d89000da2dfcb77 544 SMART SM00028 79 112 0.17 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1231 afe06360f1860e748d89000da2dfcb77 544 SMART SM00028 161 194 140.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1165 b31c6bedc63807f317a0ab3177d9b27a 415 Gene3D G3DSA:1.25.40.10 230 410 2.3E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1165 b31c6bedc63807f317a0ab3177d9b27a 415 SUPERFAMILY SSF48452 273 406 6.21E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1165 b31c6bedc63807f317a0ab3177d9b27a 415 Gene3D G3DSA:3.90.550.10 28 192 2.8E-9 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_1165 b31c6bedc63807f317a0ab3177d9b27a 415 SUPERFAMILY SSF53448 43 224 1.0E-12 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0948 3385b3cff4b119d6e4865c9221ee41f2 163 Gene3D G3DSA:3.30.428.10 1 163 8.9E-52 T 13-10-2018 IPR036265 HIT-like superfamily Theam_0948 3385b3cff4b119d6e4865c9221ee41f2 163 SUPERFAMILY SSF54197 1 162 1.86E-38 T 13-10-2018 IPR036265 HIT-like superfamily Theam_0948 3385b3cff4b119d6e4865c9221ee41f2 163 Pfam PF01230 HIT domain 40 130 3.5E-14 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Theam_1029 559b8ed19b9b6353395d24d2d7b636af 647 Pfam PF04458 Protein of unknown function (DUF505) 1 642 1.2E-246 T 13-10-2018 IPR007548 Protein of unknown function DUF505 Theam_1704 339dae5497000099b45bbc341650c526 140 Pfam PF06803 Protein of unknown function (DUF1232) 72 106 1.4E-13 T 13-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 Theam_1295 2aede39f6f1f06574e432d58857e6d80 177 SUPERFAMILY SSF55729 47 167 6.97E-8 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Theam_1295 2aede39f6f1f06574e432d58857e6d80 177 Pfam PF13673 Acetyltransferase (GNAT) domain 81 169 8.8E-7 T 13-10-2018 IPR000182 GNAT domain Theam_1295 2aede39f6f1f06574e432d58857e6d80 177 Gene3D G3DSA:3.40.630.30 30 172 1.4E-5 T 13-10-2018 Theam_1423 56890da4dc76333682126941c4edc6e8 177 SUPERFAMILY SSF52980 6 174 7.51E-32 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Theam_1423 56890da4dc76333682126941c4edc6e8 177 Gene3D G3DSA:3.90.1570.10 3 175 1.2E-22 T 13-10-2018 Theam_1423 56890da4dc76333682126941c4edc6e8 177 Pfam PF05685 Putative restriction endonuclease 12 155 1.2E-28 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Theam_0394 d486111522381cd307639ddbcf1e60c9 159 Pfam PF09622 Putative integral membrane protein (DUF2391) 31 151 6.6E-6 T 13-10-2018 IPR024464 Protein of unknown function DUF2391 Theam_1189 4937820a52253e7c9fa4377f676ea523 219 Gene3D G3DSA:3.40.50.300 3 218 8.8E-82 T 13-10-2018 Theam_1189 4937820a52253e7c9fa4377f676ea523 219 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 211 5.9E-72 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Theam_1189 4937820a52253e7c9fa4377f676ea523 219 Hamap MF_00238 Cytidylate kinase [cmk]. 5 219 32.488 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Theam_1189 4937820a52253e7c9fa4377f676ea523 219 SUPERFAMILY SSF52540 3 217 2.04E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1189 4937820a52253e7c9fa4377f676ea523 219 Pfam PF02224 Cytidylate kinase 7 216 1.5E-74 T 13-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Theam_0089 27ee6f0137306e3e58bfb2049e7cfc46 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 3 236 47.083 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Theam_0089 27ee6f0137306e3e58bfb2049e7cfc46 240 PIRSF PIRSF005650 1 239 2.8E-102 T 13-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Theam_0089 27ee6f0137306e3e58bfb2049e7cfc46 240 Pfam PF00696 Amino acid kinase family 6 215 9.1E-36 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Theam_0089 27ee6f0137306e3e58bfb2049e7cfc46 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 5 235 6.1E-105 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Theam_0089 27ee6f0137306e3e58bfb2049e7cfc46 240 Gene3D G3DSA:3.40.1160.10 2 238 3.6E-87 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Theam_0089 27ee6f0137306e3e58bfb2049e7cfc46 240 SUPERFAMILY SSF53633 3 235 9.43E-79 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Theam_1560 a658d3d7c1fee1cf805bf7ead20a19e5 250 SUPERFAMILY SSF58104 15 211 1.83E-32 T 13-10-2018 Theam_1560 a658d3d7c1fee1cf805bf7ead20a19e5 250 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 85 210 6.2E-20 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Theam_1560 a658d3d7c1fee1cf805bf7ead20a19e5 250 SMART SM00283 10 248 5.4E-4 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Theam_1560 a658d3d7c1fee1cf805bf7ead20a19e5 250 Gene3D G3DSA:1.10.287.950 13 228 2.9E-30 T 13-10-2018 Theam_0671 83e9cffe35c56174382049340a42c6b3 349 Gene3D G3DSA:3.40.50.2000 8 169 4.6E-10 T 13-10-2018 Theam_0671 83e9cffe35c56174382049340a42c6b3 349 SUPERFAMILY SSF53756 12 347 2.72E-78 T 13-10-2018 Theam_0671 83e9cffe35c56174382049340a42c6b3 349 Pfam PF00534 Glycosyl transferases group 1 168 326 3.9E-36 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Theam_0671 83e9cffe35c56174382049340a42c6b3 349 Pfam PF13439 Glycosyltransferase Family 4 96 163 2.1E-9 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Theam_0671 83e9cffe35c56174382049340a42c6b3 349 Gene3D G3DSA:3.40.50.2000 170 347 1.7E-48 T 13-10-2018 Theam_0964 a9e32853b58a585f4580e5db4d8a57c5 327 Pfam PF03747 ADP-ribosylglycohydrolase 10 299 5.1E-42 T 13-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 Theam_0964 a9e32853b58a585f4580e5db4d8a57c5 327 SUPERFAMILY SSF101478 4 320 2.35E-42 T 13-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Theam_0964 a9e32853b58a585f4580e5db4d8a57c5 327 Gene3D G3DSA:1.10.4080.10 2 326 1.1E-48 T 13-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Theam_0396 5f9d4f114cd2209a8db8d11fad5ccfd8 797 SMART SM00304 330 382 4.3E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Theam_0396 5f9d4f114cd2209a8db8d11fad5ccfd8 797 SMART SM00267 384 541 7.1E-16 T 13-10-2018 IPR000160 GGDEF domain Theam_0396 5f9d4f114cd2209a8db8d11fad5ccfd8 797 Pfam PF00563 EAL domain 558 786 2.5E-61 T 13-10-2018 IPR001633 EAL domain Theam_0396 5f9d4f114cd2209a8db8d11fad5ccfd8 797 Gene3D G3DSA:3.20.20.450 553 796 9.4E-70 T 13-10-2018 IPR035919 EAL domain superfamily Theam_0396 5f9d4f114cd2209a8db8d11fad5ccfd8 797 SUPERFAMILY SSF141868 558 795 3.27E-64 T 13-10-2018 IPR035919 EAL domain superfamily Theam_0396 5f9d4f114cd2209a8db8d11fad5ccfd8 797 Pfam PF00990 Diguanylate cyclase, GGDEF domain 396 536 3.2E-18 T 13-10-2018 IPR000160 GGDEF domain Theam_0396 5f9d4f114cd2209a8db8d11fad5ccfd8 797 Gene3D G3DSA:3.30.70.270 389 552 2.5E-26 T 13-10-2018 Theam_0396 5f9d4f114cd2209a8db8d11fad5ccfd8 797 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 393 540 2.0E-11 T 13-10-2018 IPR000160 GGDEF domain Theam_0396 5f9d4f114cd2209a8db8d11fad5ccfd8 797 SUPERFAMILY SSF55073 400 540 2.35E-20 T 13-10-2018 IPR029787 Nucleotide cyclase Theam_0396 5f9d4f114cd2209a8db8d11fad5ccfd8 797 Pfam PF08376 Nitrate and nitrite sensing 62 280 4.6E-6 T 13-10-2018 IPR013587 Nitrate/nitrite sensing protein Theam_0396 5f9d4f114cd2209a8db8d11fad5ccfd8 797 SMART SM00052 552 791 1.5E-60 T 13-10-2018 IPR001633 EAL domain Theam_0943 d1b864f4d2ae57b521a0ebba1a5ac90f 206 Pfam PF01464 Transglycosylase SLT domain 62 163 4.0E-28 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Theam_0943 d1b864f4d2ae57b521a0ebba1a5ac90f 206 SUPERFAMILY SSF53955 59 173 1.92E-41 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Theam_0943 d1b864f4d2ae57b521a0ebba1a5ac90f 206 Gene3D G3DSA:1.10.530.10 43 175 9.0E-40 T 13-10-2018 Theam_1556 2ee8c47897d7443e6e8c00da609fae84 262 SUPERFAMILY SSF53335 4 259 1.51E-36 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_1556 2ee8c47897d7443e6e8c00da609fae84 262 Pfam PF04445 Putative SAM-dependent methyltransferase 84 235 9.8E-11 T 13-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 Theam_1556 2ee8c47897d7443e6e8c00da609fae84 262 Gene3D G3DSA:3.40.50.150 72 261 5.0E-29 T 13-10-2018 Theam_0831 2e3456a4c9199351afa61cbc199325b0 254 Pfam PF03744 6-carboxyhexanoate--CoA ligase 4 243 3.8E-72 T 13-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 Theam_0831 2e3456a4c9199351afa61cbc199325b0 254 ProDom PD017229 LIGASE SYNTHASE BIOTIN MAGNESIUM PIMELOYL-COA 6-CARBOXYHEXANOATE--COA BIOSYNTHESIS 6-CARBOXYHEXANOATE-COA BIOW COA 2 217 2.0E-25 T 13-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 PIRSF PIRSF001438 1 310 2.0E-119 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 SUPERFAMILY SSF53850 1 212 1.99E-84 T 13-10-2018 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 225 296 4.0E-15 T 13-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 SUPERFAMILY SSF54782 218 307 3.4E-20 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 2 298 38.731 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 Gene3D G3DSA:3.30.160.40 220 307 4.0E-18 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 13-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 3 297 2.5E-110 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 Gene3D G3DSA:3.40.190.10 100 199 1.1E-88 T 13-10-2018 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 PRINTS PR00151 Porphobilinogen deaminase signature 73 92 9.2E-50 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 9.2E-50 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 PRINTS PR00151 Porphobilinogen deaminase signature 121 138 9.2E-50 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 PRINTS PR00151 Porphobilinogen deaminase signature 140 157 9.2E-50 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 PRINTS PR00151 Porphobilinogen deaminase signature 42 62 9.2E-50 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 Gene3D G3DSA:3.40.190.10 3 207 1.1E-88 T 13-10-2018 Theam_0506 6c24636cf135b2bdffba38f40598015d 311 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 3 209 1.2E-82 T 13-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Theam_0588 7495a5f04e1363045cef942dcdec6da4 129 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 125 1.1E-19 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Theam_0588 7495a5f04e1363045cef942dcdec6da4 129 Gene3D G3DSA:3.30.420.270 64 123 2.8E-8 T 13-10-2018 Theam_0444 92d115c66fb997ba894ccd11a1da3b53 467 Gene3D G3DSA:3.40.50.720 2 137 1.1E-29 T 13-10-2018 Theam_0444 92d115c66fb997ba894ccd11a1da3b53 467 Pfam PF02080 TrkA-C domain 151 214 2.7E-11 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Theam_0444 92d115c66fb997ba894ccd11a1da3b53 467 Gene3D G3DSA:3.30.70.1450 141 220 7.2E-12 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Theam_0444 92d115c66fb997ba894ccd11a1da3b53 467 SUPERFAMILY SSF52402 345 461 3.43E-10 T 13-10-2018 Theam_0444 92d115c66fb997ba894ccd11a1da3b53 467 Gene3D G3DSA:3.40.50.12370 300 459 1.3E-7 T 13-10-2018 Theam_0444 92d115c66fb997ba894ccd11a1da3b53 467 SUPERFAMILY SSF116726 149 216 9.94E-11 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Theam_0444 92d115c66fb997ba894ccd11a1da3b53 467 SUPERFAMILY SSF51735 1 140 1.6E-23 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0444 92d115c66fb997ba894ccd11a1da3b53 467 PRINTS PR00335 TrkA potassium uptake protein signature 18 32 2.8E-10 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Theam_0444 92d115c66fb997ba894ccd11a1da3b53 467 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.8E-10 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Theam_0444 92d115c66fb997ba894ccd11a1da3b53 467 PRINTS PR00335 TrkA potassium uptake protein signature 54 64 2.8E-10 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Theam_0444 92d115c66fb997ba894ccd11a1da3b53 467 PRINTS PR00335 TrkA potassium uptake protein signature 78 92 2.8E-10 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Theam_0444 92d115c66fb997ba894ccd11a1da3b53 467 Pfam PF02254 TrkA-N domain 4 120 7.7E-24 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Theam_0977 ebfba87c9fcb1d80df42e5438e1297e9 685 SUPERFAMILY SSF88713 7 432 6.23E-73 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Theam_0977 ebfba87c9fcb1d80df42e5438e1297e9 685 Pfam PF03065 Glycosyl hydrolase family 57 11 444 7.6E-74 T 13-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 Theam_0977 ebfba87c9fcb1d80df42e5438e1297e9 685 Gene3D G3DSA:3.20.110.20 182 478 7.0E-18 T 13-10-2018 Theam_0531 36bb6f55892a4c4849e74e0bb08ef682 221 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 5 160 6.7E-34 T 13-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Theam_0531 36bb6f55892a4c4849e74e0bb08ef682 221 Gene3D G3DSA:3.40.50.300 1 170 2.5E-44 T 13-10-2018 Theam_0531 36bb6f55892a4c4849e74e0bb08ef682 221 SUPERFAMILY SSF52540 2 135 5.73E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0531 36bb6f55892a4c4849e74e0bb08ef682 221 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 5 137 9.9E-33 T 13-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Theam_0576 a20f44328eacbb276f03e17eb5fd2723 270 Pfam PF13489 Methyltransferase domain 57 205 9.8E-13 T 13-10-2018 Theam_0576 a20f44328eacbb276f03e17eb5fd2723 270 SUPERFAMILY SSF53335 49 207 1.4E-24 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_0576 a20f44328eacbb276f03e17eb5fd2723 270 Gene3D G3DSA:3.40.50.150 51 222 1.2E-29 T 13-10-2018 Theam_0500 7da0957fa689c6cb052730f882e69803 78 Pfam PF17209 Hfq protein 3 66 1.3E-29 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Theam_0500 7da0957fa689c6cb052730f882e69803 78 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 61 24.689 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Theam_0500 7da0957fa689c6cb052730f882e69803 78 SUPERFAMILY SSF50182 2 66 1.9E-21 T 13-10-2018 IPR010920 LSM domain superfamily Theam_0500 7da0957fa689c6cb052730f882e69803 78 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 1 61 7.2E-29 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Theam_0500 7da0957fa689c6cb052730f882e69803 78 Gene3D G3DSA:2.30.30.100 1 78 2.5E-29 T 13-10-2018 Theam_1092 524e3086dfcaf10d1cfff2c8e1f5e6b9 658 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 177 642 2.3E-77 T 13-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH Theam_1092 524e3086dfcaf10d1cfff2c8e1f5e6b9 658 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 33 165 6.1E-29 T 13-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH Theam_0647 1b05c15184848783feb064eeea4654ae 380 Gene3D G3DSA:1.20.1530.20 4 372 1.6E-51 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily Theam_0647 1b05c15184848783feb064eeea4654ae 380 Pfam PF00999 Sodium/hydrogen exchanger family 9 357 5.5E-39 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Theam_1293 65143923ae156c908d06bec6c4c7f191 268 SUPERFAMILY SSF52467 2 262 1.31E-79 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Theam_1293 65143923ae156c908d06bec6c4c7f191 268 Pfam PF02146 Sir2 family 19 217 6.6E-50 T 13-10-2018 IPR003000 Sirtuin family GO:0070403 Theam_1293 65143923ae156c908d06bec6c4c7f191 268 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 12 267 56.49 T 13-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 Theam_1293 65143923ae156c908d06bec6c4c7f191 268 Gene3D G3DSA:3.30.1600.10 28 187 1.1E-81 T 13-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily Theam_1293 65143923ae156c908d06bec6c4c7f191 268 Gene3D G3DSA:3.40.50.1220 12 260 1.1E-81 T 13-10-2018 Theam_0981 3373e267a71b7e57f0d99f029d795b37 199 SMART SM00959 9 51 4.4E-5 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Theam_0981 3373e267a71b7e57f0d99f029d795b37 199 Pfam PF07498 Rho termination factor, N-terminal domain 9 45 9.8E-8 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Theam_0981 3373e267a71b7e57f0d99f029d795b37 199 SUPERFAMILY SSF68912 7 44 5.89E-6 T 13-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Theam_0234 5bd70879af1f4a61d673b90f8165908d 299 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 262 2.9E-124 T 13-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Theam_0234 5bd70879af1f4a61d673b90f8165908d 299 Gene3D G3DSA:3.90.550.10 1 289 1.5E-89 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0234 5bd70879af1f4a61d673b90f8165908d 299 SUPERFAMILY SSF53448 3 272 1.42E-65 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Theam_0234 5bd70879af1f4a61d673b90f8165908d 299 Pfam PF00483 Nucleotidyl transferase 4 263 2.8E-29 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Theam_1482 b9145fa3343064a0f088936bbc9a1b5b 357 SUPERFAMILY SSF51412 11 338 1.22E-58 T 13-10-2018 Theam_1482 b9145fa3343064a0f088936bbc9a1b5b 357 Gene3D G3DSA:3.20.20.70 9 354 8.5E-81 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1482 b9145fa3343064a0f088936bbc9a1b5b 357 Pfam PF03060 Nitronate monooxygenase 13 341 3.2E-61 T 13-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Theam_0580 3f707152465c43c6cd4ef7ab2c0fe762 281 Pfam PF04321 RmlD substrate binding domain 2 275 9.0E-77 T 13-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Theam_0580 3f707152465c43c6cd4ef7ab2c0fe762 281 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 275 1.1E-74 T 13-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Theam_0580 3f707152465c43c6cd4ef7ab2c0fe762 281 Gene3D G3DSA:3.90.25.10 158 271 3.0E-82 T 13-10-2018 Theam_0580 3f707152465c43c6cd4ef7ab2c0fe762 281 SUPERFAMILY SSF51735 2 275 2.98E-74 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Theam_0580 3f707152465c43c6cd4ef7ab2c0fe762 281 Gene3D G3DSA:3.40.50.720 4 265 3.0E-82 T 13-10-2018 Theam_1809 1224487944122b681eeb26fc0fd84935 258 SUPERFAMILY SSF52833 123 245 7.66E-14 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Theam_1809 1224487944122b681eeb26fc0fd84935 258 Pfam PF13098 Thioredoxin-like domain 125 246 1.6E-7 T 13-10-2018 IPR012336 Thioredoxin-like fold Theam_1809 1224487944122b681eeb26fc0fd84935 258 Gene3D G3DSA:3.40.30.10 124 256 4.2E-18 T 13-10-2018 Theam_0798 aa611d7ff250a153135aeee6738e6633 223 Pfam PF01596 O-methyltransferase 26 218 4.4E-28 T 13-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 Theam_0798 aa611d7ff250a153135aeee6738e6633 223 Gene3D G3DSA:3.40.50.150 13 221 3.5E-47 T 13-10-2018 Theam_0798 aa611d7ff250a153135aeee6738e6633 223 SUPERFAMILY SSF53335 38 218 6.0E-29 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Theam_0403 af81cf750f1a3743f1f5c4ff2f1a255c 168 Gene3D G3DSA:3.30.1330.70 19 134 2.2E-7 T 13-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 Theam_0403 af81cf750f1a3743f1f5c4ff2f1a255c 168 SUPERFAMILY SSF103084 36 133 6.93E-11 T 13-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 Theam_0403 af81cf750f1a3743f1f5c4ff2f1a255c 168 Pfam PF05866 Endodeoxyribonuclease RusA 34 115 7.2E-7 T 13-10-2018 IPR008822 Holliday junction resolvase RusA-like GO:0000287|GO:0006281|GO:0006310 Theam_1419 d280b45e2df84c9ba44f9b74d69fe956 162 SUPERFAMILY SSF52402 2 153 9.21E-12 T 13-10-2018 Theam_1419 d280b45e2df84c9ba44f9b74d69fe956 162 Pfam PF00582 Universal stress protein family 3 152 1.8E-9 T 13-10-2018 IPR006016 UspA Theam_1419 d280b45e2df84c9ba44f9b74d69fe956 162 Gene3D G3DSA:3.40.50.620 1 161 1.6E-14 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Theam_0513 e6951f5ec261035a349bb3384d9c547a 387 SUPERFAMILY SSF53187 150 374 2.45E-45 T 13-10-2018 Theam_0513 e6951f5ec261035a349bb3384d9c547a 387 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 152 371 9.0E-45 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Theam_0513 e6951f5ec261035a349bb3384d9c547a 387 SMART SM00646 217 371 5.3E-22 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Theam_0513 e6951f5ec261035a349bb3384d9c547a 387 Gene3D G3DSA:3.40.630.40 142 382 1.3E-58 T 13-10-2018 Theam_0513 e6951f5ec261035a349bb3384d9c547a 387 Gene3D G3DSA:2.60.40.3500 20 136 2.9E-6 T 13-10-2018 Theam_1681 afb657da74db738a98e0ea003bf99988 445 Gene3D G3DSA:1.10.101.10 374 443 2.8E-10 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Theam_1681 afb657da74db738a98e0ea003bf99988 445 SUPERFAMILY SSF47090 374 442 6.02E-13 T 13-10-2018 IPR036365 PGBD-like superfamily Theam_1681 afb657da74db738a98e0ea003bf99988 445 Pfam PF01471 Putative peptidoglycan binding domain 390 440 8.1E-9 T 13-10-2018 IPR002477 Peptidoglycan binding-like Theam_1357 3c514fd510d9f6365d72acbeac484f03 174 Pfam PF04390 Lipopolysaccharide-assembly 30 158 1.7E-10 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Theam_1445 eb0963825a21cf599887aa17627d3c5a 170 Pfam PF03748 Flagellar basal body-associated protein FliL 73 168 1.5E-26 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Theam_0388 3ee5b4c9299a470c1221321ae02aa1ca 108 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 23 1.0E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_0388 3ee5b4c9299a470c1221321ae02aa1ca 108 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 23 2.9E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_1639 83ee61da4b8f311ede55d9df66b10012 343 SUPERFAMILY SSF88713 21 288 8.04E-21 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Theam_1639 83ee61da4b8f311ede55d9df66b10012 343 Pfam PF01522 Polysaccharide deacetylase 48 158 3.4E-14 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Theam_0680 4b613371d6049235e4dc72d3649eb075 173 Gene3D G3DSA:1.20.5.340 15 93 4.6E-5 T 13-10-2018 Theam_0680 4b613371d6049235e4dc72d3649eb075 173 SUPERFAMILY SSF57997 20 159 4.25E-6 T 13-10-2018 Theam_1241 a25bb068be789b431131b0d42aafa85f 197 ProDom PD105539 COIL PRECURSOR AQ_678 COILED SIGNAL 18 196 4.0E-18 T 13-10-2018 Theam_0585 46536d7f6f2c39e37bfa36c8331d3e6b 184 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 41 172 3.5E-14 T 13-10-2018 IPR010181 CGCAxxGCC motif Theam_0585 46536d7f6f2c39e37bfa36c8331d3e6b 184 SUPERFAMILY SSF48695 25 177 5.02E-19 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_0147 ef1decd23a754e05199896528ea0de33 287 Gene3D G3DSA:3.40.50.970 18 286 7.8E-118 T 13-10-2018 Theam_0147 ef1decd23a754e05199896528ea0de33 287 SUPERFAMILY SSF52518 20 284 3.87E-98 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Theam_0147 ef1decd23a754e05199896528ea0de33 287 ProSitePatterns PS00801 Transketolase signature 1. 29 49 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Theam_0147 ef1decd23a754e05199896528ea0de33 287 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 29 284 2.3E-68 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Theam_0668 e37232d087b89e6210adee8036e3309e 278 SUPERFAMILY SSF52540 2 277 1.39E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0668 e37232d087b89e6210adee8036e3309e 278 Pfam PF00685 Sulfotransferase domain 4 191 1.4E-12 T 13-10-2018 IPR000863 Sulfotransferase domain GO:0008146 Theam_0739 5862ebf24620640ada88f349581d4de7 319 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 201 214 - T 13-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0739 5862ebf24620640ada88f349581d4de7 319 Pfam PF00146 NADH dehydrogenase 8 311 6.3E-113 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0739 5862ebf24620640ada88f349581d4de7 319 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 4 318 23.236 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0739 5862ebf24620640ada88f349581d4de7 319 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 46 61 - T 13-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0857 7424907e39774a15b4c8786ab7513ff5 323 Pfam PF06463 Molybdenum Cofactor Synthesis C 178 302 2.7E-31 T 13-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0857 7424907e39774a15b4c8786ab7513ff5 323 Pfam PF13353 4Fe-4S single cluster domain 12 115 6.5E-10 T 13-10-2018 Theam_0857 7424907e39774a15b4c8786ab7513ff5 323 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 3 323 7.9E-110 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0857 7424907e39774a15b4c8786ab7513ff5 323 Gene3D G3DSA:3.20.20.70 1 323 7.5E-88 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0857 7424907e39774a15b4c8786ab7513ff5 323 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 11 22 - T 13-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0857 7424907e39774a15b4c8786ab7513ff5 323 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 1 323 35.713 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Theam_0857 7424907e39774a15b4c8786ab7513ff5 323 Pfam PF04055 Radical SAM superfamily 9 172 1.2E-29 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0857 7424907e39774a15b4c8786ab7513ff5 323 SUPERFAMILY SSF102114 4 273 6.02E-72 T 13-10-2018 Theam_0857 7424907e39774a15b4c8786ab7513ff5 323 SMART SM00729 5 210 4.7E-12 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Theam_1677 adeb2ec915f065f978cd61c1fd432aba 148 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 7 147 43.108 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Theam_1677 adeb2ec915f065f978cd61c1fd432aba 148 Gene3D G3DSA:3.40.140.10 1 148 1.3E-56 T 13-10-2018 Theam_1677 adeb2ec915f065f978cd61c1fd432aba 148 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 90 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Theam_1677 adeb2ec915f065f978cd61c1fd432aba 148 Pfam PF14437 MafB19-like deaminase 7 147 6.1E-36 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Theam_1677 adeb2ec915f065f978cd61c1fd432aba 148 SUPERFAMILY SSF53927 3 144 3.51E-50 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Theam_0816 d4d79e1912e01e139d7187e394f8bae4 234 Hamap MF_00801 Endonuclease V [nfi]. 4 221 33.156 T 13-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 Theam_0816 d4d79e1912e01e139d7187e394f8bae4 234 Pfam PF04493 Endonuclease V 14 211 6.4E-72 T 13-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 Theam_0816 d4d79e1912e01e139d7187e394f8bae4 234 Gene3D G3DSA:3.30.2170.10 1 227 2.7E-77 T 13-10-2018 Theam_1185 761ba0dbd9c931f03dd445700acf0759 196 Gene3D G3DSA:2.50.20.10 25 195 1.7E-30 T 13-10-2018 Theam_1185 761ba0dbd9c931f03dd445700acf0759 196 SUPERFAMILY SSF89392 28 191 9.02E-23 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Theam_1185 761ba0dbd9c931f03dd445700acf0759 196 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 30 192 2.2E-25 T 13-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like Theam_0350 e29d0c7db566f3fe0d64364963460675 119 Gene3D G3DSA:3.30.450.30 1 119 1.8E-5 T 13-10-2018 Theam_0150 49f99be52d5f9c04ea2b549c1c23d994 207 Pfam PF12697 Alpha/beta hydrolase family 5 201 4.0E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Theam_0150 49f99be52d5f9c04ea2b549c1c23d994 207 Gene3D G3DSA:3.40.50.1820 1 205 7.7E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Theam_0150 49f99be52d5f9c04ea2b549c1c23d994 207 SUPERFAMILY SSF53474 2 202 8.78E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Theam_0866 8cce129ba62e357232418af5482fb5b9 361 Pfam PF12698 ABC-2 family transporter protein 36 353 1.3E-30 T 13-10-2018 Theam_1137 469cbef50b1081c15943b30712fad881 163 Pfam PF01618 MotA/TolQ/ExbB proton channel family 49 146 3.1E-22 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Theam_0870 2ecca436d0a56a53ed98bf6bdfe79ebe 236 Pfam PF03787 RAMP superfamily 16 219 1.3E-19 T 13-10-2018 IPR005537 CRISPR type III-associated RAMP protein Theam_0870 2ecca436d0a56a53ed98bf6bdfe79ebe 236 TIGRFAM TIGR02582 cas7_TM1809: CRISPR type III-A/MTUBE-associated RAMP protein Csm3 10 220 3.7E-51 T 13-10-2018 IPR013412 CRISPR-associated RAMP Csm3 Theam_0105 9a9185e2b0206be0a94b480abdb15083 124 SMART SM00960 7 99 1.1E-13 T 13-10-2018 IPR004942 Roadblock/LAMTOR2 domain Theam_0105 9a9185e2b0206be0a94b480abdb15083 124 SUPERFAMILY SSF103196 3 123 4.71E-23 T 13-10-2018 Theam_0105 9a9185e2b0206be0a94b480abdb15083 124 Gene3D G3DSA:3.30.450.30 1 124 5.0E-26 T 13-10-2018 Theam_0105 9a9185e2b0206be0a94b480abdb15083 124 Pfam PF03259 Roadblock/LC7 domain 21 98 2.4E-8 T 13-10-2018 IPR004942 Roadblock/LAMTOR2 domain Theam_1399 a59c2d9dad79db2901e869f7bfd389e1 414 SUPERFAMILY SSF48452 3 69 9.96E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1399 a59c2d9dad79db2901e869f7bfd389e1 414 Pfam PF13181 Tetratricopeptide repeat 249 274 0.19 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1399 a59c2d9dad79db2901e869f7bfd389e1 414 Pfam PF13181 Tetratricopeptide repeat 180 211 2.1E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1399 a59c2d9dad79db2901e869f7bfd389e1 414 Pfam PF13181 Tetratricopeptide repeat 44 69 1.3E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1399 a59c2d9dad79db2901e869f7bfd389e1 414 Gene3D G3DSA:1.25.40.10 77 399 1.1E-44 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1399 a59c2d9dad79db2901e869f7bfd389e1 414 SUPERFAMILY SSF48452 82 386 4.17E-26 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1399 a59c2d9dad79db2901e869f7bfd389e1 414 Gene3D G3DSA:1.25.40.10 1 76 1.2E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_1399 a59c2d9dad79db2901e869f7bfd389e1 414 SMART SM00028 78 111 18.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1399 a59c2d9dad79db2901e869f7bfd389e1 414 SMART SM00028 179 212 0.02 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1399 a59c2d9dad79db2901e869f7bfd389e1 414 SMART SM00028 283 316 74.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1399 a59c2d9dad79db2901e869f7bfd389e1 414 SMART SM00028 112 145 190.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1399 a59c2d9dad79db2901e869f7bfd389e1 414 SMART SM00028 43 76 0.014 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1399 a59c2d9dad79db2901e869f7bfd389e1 414 SMART SM00028 247 280 1.8 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1399 a59c2d9dad79db2901e869f7bfd389e1 414 SMART SM00028 213 246 46.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Theam_1491 af179cea40dd2b96c8a7ba90a8115f55 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 92 6.8E-16 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Theam_1491 af179cea40dd2b96c8a7ba90a8115f55 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 102 15.62 T 13-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 Theam_0419 a083c2e64aff3a1bd8ac9f7878d6264c 300 Pfam PF13414 TPR repeat 212 239 8.5E-9 T 13-10-2018 Theam_0419 a083c2e64aff3a1bd8ac9f7878d6264c 300 SUPERFAMILY SSF48452 208 286 5.41E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0419 a083c2e64aff3a1bd8ac9f7878d6264c 300 Gene3D G3DSA:1.25.40.10 204 292 1.1E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Theam_0072 74cf8f6124ea420f70098d8ba8aade62 345 Pfam PF09002 Domain of unknown function (DUF1887) 185 306 6.0E-9 T 13-10-2018 IPR015093 Protein of unknown function DUF1887 Theam_0072 74cf8f6124ea420f70098d8ba8aade62 345 Gene3D G3DSA:3.40.1350.10 192 342 1.2E-14 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Theam_0072 74cf8f6124ea420f70098d8ba8aade62 345 SUPERFAMILY SSF52980 4 324 2.33E-21 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Theam_1473 d7df7aa190c3fafd14a0ca88dd31e42c 198 SUPERFAMILY SSF52833 46 191 4.5E-35 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Theam_1473 d7df7aa190c3fafd14a0ca88dd31e42c 198 Pfam PF00578 AhpC/TSA family 46 165 1.4E-16 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Theam_1473 d7df7aa190c3fafd14a0ca88dd31e42c 198 Gene3D G3DSA:3.40.30.10 16 196 8.0E-42 T 13-10-2018 Theam_1473 d7df7aa190c3fafd14a0ca88dd31e42c 198 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Theam_0069 e09f3396e76d2d230b7a656367d75c66 126 SUPERFAMILY SSF52821 18 109 1.0E-16 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Theam_0069 e09f3396e76d2d230b7a656367d75c66 126 Gene3D G3DSA:3.40.250.10 17 115 1.8E-13 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Theam_0069 e09f3396e76d2d230b7a656367d75c66 126 SMART SM00450 22 118 1.2E-7 T 13-10-2018 IPR001763 Rhodanese-like domain Theam_0095 512feadd7da09b6c81c01e24b9afc20a 408 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 263 280 1.7E-4 T 13-10-2018 IPR010177 Doubled CXXCH motif Theam_0095 512feadd7da09b6c81c01e24b9afc20a 408 SUPERFAMILY SSF48695 29 405 2.04E-15 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_0865 9844cf13974442608a658e7ea0e63ce2 368 Pfam PF12698 ABC-2 family transporter protein 23 359 1.3E-41 T 13-10-2018 Theam_0482 5a9f8a5ef6645a94084ab2d774aa0665 619 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 111 157 3.3E-10 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0482 5a9f8a5ef6645a94084ab2d774aa0665 619 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 255 276 2.1E-25 T 13-10-2018 Theam_0482 5a9f8a5ef6645a94084ab2d774aa0665 619 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 344 356 2.1E-25 T 13-10-2018 Theam_0482 5a9f8a5ef6645a94084ab2d774aa0665 619 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 117 142 2.1E-25 T 13-10-2018 Theam_0482 5a9f8a5ef6645a94084ab2d774aa0665 619 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 277 303 2.1E-25 T 13-10-2018 Theam_0482 5a9f8a5ef6645a94084ab2d774aa0665 619 Pfam PF00361 Proton-conducting membrane transporter 171 437 5.8E-46 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0152 f0c9fe6b5ff0f2303d3939d362370abd 262 Gene3D G3DSA:2.120.10.30 23 249 1.3E-17 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Theam_0152 f0c9fe6b5ff0f2303d3939d362370abd 262 SUPERFAMILY SSF101898 35 237 6.28E-28 T 13-10-2018 Theam_1674 86d01ba0c3046b7529ae23a60bd6ea2d 117 SUPERFAMILY SSF46785 31 103 5.46E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Theam_0667 a546894c8a88f0bff005dc2ebb8872c8 402 Pfam PF01943 Polysaccharide biosynthesis protein 3 264 7.1E-15 T 13-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Theam_0667 a546894c8a88f0bff005dc2ebb8872c8 402 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 316 396 3.5E-8 T 13-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Theam_1620 fbddd47a62c67621347adfa55bd5573d 174 Pfam PF01930 Domain of unknown function DUF83 17 172 2.3E-49 T 13-10-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 Theam_1620 fbddd47a62c67621347adfa55bd5573d 174 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 17 171 5.4E-24 T 13-10-2018 IPR013343 CRISPR-associated protein Cas4 Theam_1620 fbddd47a62c67621347adfa55bd5573d 174 Gene3D G3DSA:3.90.320.10 5 173 2.0E-7 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Theam_0372 347ace2f050c8e3539af84ad31d98972 167 Pfam PF06195 Protein of unknown function (DUF996) 27 150 2.1E-16 T 13-10-2018 IPR010397 Protein of unknown function DUF996 Theam_0225 2413bad4fb0ce250bf19f9432fcbccce 223 SUPERFAMILY SSF46894 154 220 4.25E-9 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Theam_0225 2413bad4fb0ce250bf19f9432fcbccce 223 Gene3D G3DSA:1.10.10.10 128 221 5.6E-9 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Theam_0225 2413bad4fb0ce250bf19f9432fcbccce 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 219 2.8E-5 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Theam_0225 2413bad4fb0ce250bf19f9432fcbccce 223 SMART SM00862 147 219 5.6E-7 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Theam_1205 70c8447ad96bf3a5849dcd03517d6e90 98 SUPERFAMILY SSF102829 6 91 4.97E-12 T 13-10-2018 IPR036192 Cell division protein ZapA-like superfamily Theam_1205 70c8447ad96bf3a5849dcd03517d6e90 98 Pfam PF05164 Cell division protein ZapA 7 84 6.8E-13 T 13-10-2018 IPR007838 Cell division protein ZapA-like Theam_0763 6c10a6d9b2999de2587ca92a086f4afe 319 Pfam PF02562 PhoH-like protein 108 311 4.9E-96 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 Theam_0763 6c10a6d9b2999de2587ca92a086f4afe 319 Gene3D G3DSA:3.40.50.300 105 311 1.1E-77 T 13-10-2018 Theam_0763 6c10a6d9b2999de2587ca92a086f4afe 319 SUPERFAMILY SSF52540 43 288 3.7E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1385 6871e0a29d44686608d7b0e60822b515 449 PRINTS PR01005 Flagellar hook-associated protein signature 150 174 3.1E-12 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Theam_1385 6871e0a29d44686608d7b0e60822b515 449 PRINTS PR01005 Flagellar hook-associated protein signature 208 226 3.1E-12 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Theam_1385 6871e0a29d44686608d7b0e60822b515 449 PRINTS PR01005 Flagellar hook-associated protein signature 117 137 3.1E-12 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Theam_1385 6871e0a29d44686608d7b0e60822b515 449 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 3.1E-12 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Theam_1385 6871e0a29d44686608d7b0e60822b515 449 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 447 1.0E-96 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Theam_1385 6871e0a29d44686608d7b0e60822b515 449 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 391 447 1.6E-14 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Theam_1385 6871e0a29d44686608d7b0e60822b515 449 SUPERFAMILY SSF64518 126 446 2.22E-20 T 13-10-2018 Theam_0745 87ad062f36e529e58f2542c50453dc01 482 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 6 466 4.2E-116 T 13-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Theam_0745 87ad062f36e529e58f2542c50453dc01 482 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 3 467 16.856 T 13-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Theam_0745 87ad062f36e529e58f2542c50453dc01 482 Pfam PF00361 Proton-conducting membrane transporter 124 418 9.1E-62 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_0543 21604db80750a97f915dd36fb0dcee93 428 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 383 6.6E-63 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Theam_0543 21604db80750a97f915dd36fb0dcee93 428 Gene3D G3DSA:2.40.160.60 22 428 9.4E-92 T 13-10-2018 Theam_0543 21604db80750a97f915dd36fb0dcee93 428 SUPERFAMILY SSF56935 25 428 1.05E-68 T 13-10-2018 Theam_0387 a46d98583fb097c22bf21ea13d4cff06 186 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 31 8.2E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_0387 a46d98583fb097c22bf21ea13d4cff06 186 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_0387 a46d98583fb097c22bf21ea13d4cff06 186 SUPERFAMILY SSF54523 11 72 6.51E-6 T 13-10-2018 Theam_0387 a46d98583fb097c22bf21ea13d4cff06 186 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 2.5E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Theam_0552 c9e60a06af4042b80d087ebf6423f75e 194 Pfam PF04368 Protein of unknown function (DUF507) 5 185 2.1E-38 T 13-10-2018 IPR007463 Protein of unknown function DUF507 Theam_0662 fa931597ea27b88ced0e99ac62552398 510 Pfam PF03772 Competence protein 156 399 1.7E-22 T 13-10-2018 IPR004477 ComEC/Rec2-related protein Theam_0662 fa931597ea27b88ced0e99ac62552398 510 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 177 323 4.7E-12 T 13-10-2018 IPR004477 ComEC/Rec2-related protein Theam_0768 839fde79eb641a74708b1c65e4079116 309 Pfam PF13394 4Fe-4S single cluster domain 27 130 1.5E-5 T 13-10-2018 Theam_0768 839fde79eb641a74708b1c65e4079116 309 Pfam PF04055 Radical SAM superfamily 23 184 9.0E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Theam_0768 839fde79eb641a74708b1c65e4079116 309 SUPERFAMILY SSF102114 21 222 2.22E-28 T 13-10-2018 Theam_0768 839fde79eb641a74708b1c65e4079116 309 Gene3D G3DSA:3.20.20.70 18 239 2.6E-25 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_1616 fb16e179890bb9af3c20b59c69d04aca 547 TIGRFAM TIGR01908 cas_CXXC_CXXC: CRISPR-associated protein Cas8b1/Cst1, subtype I-B/TNEAP 201 502 5.0E-36 T 13-10-2018 IPR010180 CRISPR-associated protein, CXXC-CXXC Theam_0620 78336ab9d52c6cb230cc1fada16f3560 180 Gene3D G3DSA:3.40.50.300 1 170 6.8E-56 T 13-10-2018 Theam_0620 78336ab9d52c6cb230cc1fada16f3560 180 Hamap MF_00796 Nucleoside-triphosphatase . 1 172 24.965 T 13-10-2018 IPR004948 Nucleoside-triphosphatase, THEP1 type GO:0098519 KEGG: 00230+3.6.1.15|KEGG: 00730+3.6.1.15|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Theam_0620 78336ab9d52c6cb230cc1fada16f3560 180 SUPERFAMILY SSF52540 3 168 8.42E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0620 78336ab9d52c6cb230cc1fada16f3560 180 Pfam PF03266 NTPase 2 165 6.4E-50 T 13-10-2018 IPR004948 Nucleoside-triphosphatase, THEP1 type GO:0098519 KEGG: 00230+3.6.1.15|KEGG: 00730+3.6.1.15|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Theam_0504 9ec150890c1a16511c4245877622f9d6 90 Pfam PF04316 Anti-sigma-28 factor, FlgM 51 84 2.6E-7 T 13-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal Theam_0504 9ec150890c1a16511c4245877622f9d6 90 SUPERFAMILY SSF101498 27 86 5.1E-9 T 13-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily Theam_0273 5e212658fd73e8719cd66c01cdf8b153 121 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 8 121 1.9E-41 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0273 5e212658fd73e8719cd66c01cdf8b153 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 5 121 5.4E-48 T 13-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Theam_0273 5e212658fd73e8719cd66c01cdf8b153 121 Gene3D G3DSA:3.30.420.100 4 121 1.4E-46 T 13-10-2018 Theam_0273 5e212658fd73e8719cd66c01cdf8b153 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 5 121 29.38 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Theam_0273 5e212658fd73e8719cd66c01cdf8b153 121 SUPERFAMILY SSF53137 6 119 1.94E-53 T 13-10-2018 Theam_0923 32f84f75e64ea910d74e2c5494b43066 256 Pfam PF03649 Uncharacterised protein family (UPF0014) 11 248 2.4E-35 T 13-10-2018 IPR005226 UPF0014 family Theam_1500 a6ff06c9c4518c7a6eccfbf9b6a1afef 280 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 12 275 3.3E-88 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Theam_1500 a6ff06c9c4518c7a6eccfbf9b6a1afef 280 SUPERFAMILY SSF161098 20 269 6.64E-32 T 13-10-2018 IPR035906 MetI-like superfamily Theam_1500 a6ff06c9c4518c7a6eccfbf9b6a1afef 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 273 1.2E-26 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Theam_1500 a6ff06c9c4518c7a6eccfbf9b6a1afef 280 Gene3D G3DSA:1.10.3720.10 60 276 5.8E-30 T 13-10-2018 IPR035906 MetI-like superfamily Theam_1281 0819af4c89064392acb6fd89f1d2b64f 385 Pfam PF04286 Protein of unknown function (DUF445) 9 384 3.7E-54 T 13-10-2018 IPR007383 Protein of unknown function DUF445 Theam_0200 748d0da081c96027208ccb6c4c225fc0 206 SUPERFAMILY SSF140663 105 204 1.83E-25 T 13-10-2018 IPR023203 TTHA0068-like superfamily Theam_0200 748d0da081c96027208ccb6c4c225fc0 206 Gene3D G3DSA:1.20.58.500 107 200 8.9E-20 T 13-10-2018 Theam_0200 748d0da081c96027208ccb6c4c225fc0 206 Pfam PF03745 Domain of unknown function (DUF309) 111 165 2.0E-17 T 13-10-2018 IPR005500 Protein of unknown function DUF309 Theam_1108 a896a206439334193e776bada3ffd80a 209 Pfam PF01618 MotA/TolQ/ExbB proton channel family 70 193 1.1E-31 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Theam_1161 25663cae35b9f105bd3b2f0aaebc034b 116 Gene3D G3DSA:3.30.160.170 15 112 8.2E-18 T 13-10-2018 IPR035924 FlaG-like superfamily Theam_1161 25663cae35b9f105bd3b2f0aaebc034b 116 Pfam PF03646 FlaG protein 21 114 1.5E-27 T 13-10-2018 IPR005186 FlaG protein Theam_1161 25663cae35b9f105bd3b2f0aaebc034b 116 SUPERFAMILY SSF160214 18 116 9.29E-27 T 13-10-2018 IPR035924 FlaG-like superfamily Theam_1322 fb9c3fa056f443032faa5fa1dd0811d6 289 Pfam PF10938 YfdX protein 53 191 3.9E-29 T 13-10-2018 IPR021236 Uncharacterised protein family YfdX Theam_0684 15c9c74369f812a619abde02b54012a4 552 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 390 511 1.2E-30 T 13-10-2018 IPR025299 CstA, C-terminal domain Theam_0684 15c9c74369f812a619abde02b54012a4 552 Pfam PF02554 Carbon starvation protein CstA 3 373 4.0E-122 T 13-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 Theam_1331 46881ce98ab41be3a9827dc90d559227 290 Pfam PF01972 Serine dehydrogenase proteinase 10 280 1.3E-126 T 13-10-2018 IPR002825 Peptidase S49, serine-peptidase prokaryotes GO:0016021 Theam_1331 46881ce98ab41be3a9827dc90d559227 290 Gene3D G3DSA:3.90.226.10 64 261 3.7E-23 T 13-10-2018 Theam_1331 46881ce98ab41be3a9827dc90d559227 290 SUPERFAMILY SSF52096 11 243 4.81E-29 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Theam_0564 26f074a8c52c72d24422a95e01c38443 359 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 20 308 3.7E-74 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Theam_0564 26f074a8c52c72d24422a95e01c38443 359 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 26 307 4.3E-47 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Theam_0564 26f074a8c52c72d24422a95e01c38443 359 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 4 333 25.232 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Theam_1650 804329166fb06aaf1d6e79ee36182a54 68 Gene3D G3DSA:3.10.20.30 2 68 2.8E-10 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Theam_1650 804329166fb06aaf1d6e79ee36182a54 68 SUPERFAMILY SSF54285 19 65 1.2E-8 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Theam_1524 7030767425ddaab9737c35bd5c3a4777 199 SUPERFAMILY SSF49478 36 93 7.85E-9 T 13-10-2018 Theam_1524 7030767425ddaab9737c35bd5c3a4777 199 Gene3D G3DSA:2.60.40.10 24 132 4.6E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold Theam_0227 575d24d5b76ed5d970ef5ea95e314587 381 Pfam PF00266 Aminotransferase class-V 8 344 3.4E-47 T 13-10-2018 IPR000192 Aminotransferase class V domain Theam_0227 575d24d5b76ed5d970ef5ea95e314587 381 SUPERFAMILY SSF53383 7 362 1.21E-101 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Theam_0227 575d24d5b76ed5d970ef5ea95e314587 381 Gene3D G3DSA:3.90.1150.10 12 371 1.4E-134 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Theam_0227 575d24d5b76ed5d970ef5ea95e314587 381 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 184 204 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Theam_0227 575d24d5b76ed5d970ef5ea95e314587 381 PIRSF PIRSF000524 1 380 4.6E-135 T 13-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Theam_0227 575d24d5b76ed5d970ef5ea95e314587 381 Gene3D G3DSA:3.40.640.10 17 259 1.4E-134 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Theam_0113 eed9973e96273d30cc4e19e052818591 202 Pfam PF00025 ADP-ribosylation factor family 68 155 1.5E-6 T 13-10-2018 IPR006689 Small GTPase superfamily, ARF/SAR type GO:0005525 Theam_0113 eed9973e96273d30cc4e19e052818591 202 Gene3D G3DSA:3.40.50.300 1 191 5.6E-61 T 13-10-2018 Theam_0113 eed9973e96273d30cc4e19e052818591 202 SUPERFAMILY SSF52540 10 186 1.15E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0796 2ceb22ac4af22f3a2ed2c73b46046987 372 Gene3D G3DSA:2.160.20.10 41 355 1.6E-39 T 13-10-2018 IPR012334 Pectin lyase fold Theam_0796 2ceb22ac4af22f3a2ed2c73b46046987 372 SUPERFAMILY SSF51126 47 335 8.17E-40 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Theam_0796 2ceb22ac4af22f3a2ed2c73b46046987 372 Pfam PF07602 Protein of unknown function (DUF1565) 54 344 5.6E-10 T 13-10-2018 IPR011459 Domain of unknown function DUF1565 Theam_1136 5d1d0b508d6ad15f5e812a12f1376ff8 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 135 4.5E-23 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Theam_1136 5d1d0b508d6ad15f5e812a12f1376ff8 142 Gene3D G3DSA:3.30.420.270 63 132 3.2E-9 T 13-10-2018 Theam_0519 ff722a9911d2e598063d3092060f0387 560 Gene3D G3DSA:3.40.50.300 13 108 5.0E-48 T 13-10-2018 Theam_0519 ff722a9911d2e598063d3092060f0387 560 Gene3D G3DSA:3.40.50.300 229 313 3.3E-36 T 13-10-2018 Theam_0519 ff722a9911d2e598063d3092060f0387 560 Gene3D G3DSA:1.10.8.10 109 132 5.0E-48 T 13-10-2018 Theam_0519 ff722a9911d2e598063d3092060f0387 560 SMART SM00382 51 314 1.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_0519 ff722a9911d2e598063d3092060f0387 560 Pfam PF07728 AAA domain (dynein-related subfamily) 54 89 1.9E-5 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Theam_0519 ff722a9911d2e598063d3092060f0387 560 SUPERFAMILY SSF52540 19 379 4.33E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0519 ff722a9911d2e598063d3092060f0387 560 Pfam PF07724 AAA domain (Cdc48 subfamily) 229 310 1.7E-11 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Theam_1149 15dd4102f2d551f5784b2dcc3fb329b3 321 SUPERFAMILY SSF55874 199 309 1.66E-11 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_1149 15dd4102f2d551f5784b2dcc3fb329b3 321 Gene3D G3DSA:3.30.565.10 183 313 1.6E-7 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Theam_1149 15dd4102f2d551f5784b2dcc3fb329b3 321 SMART SM00387 237 320 0.006 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Theam_0204 b6892af6e2c9f5fbc54531778b1b2424 486 Pfam PF05226 CHASE2 domain 113 315 1.9E-7 T 13-10-2018 IPR007890 CHASE2 Theam_1304 fca6fd8dd9a6fa56a19aba3f8913a7d7 181 Gene3D G3DSA:3.40.50.1010 10 173 8.9E-48 T 13-10-2018 Theam_1304 fca6fd8dd9a6fa56a19aba3f8913a7d7 181 Pfam PF01936 NYN domain 18 170 2.1E-33 T 13-10-2018 IPR021139 NYN domain, limkain-b1-type Theam_0503 ab3c5bcbeea66948ed1f5364a1db1678 92 Gene3D G3DSA:3.40.1690.10 3 83 2.9E-28 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Theam_0503 ab3c5bcbeea66948ed1f5364a1db1678 92 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 78 1.3E-22 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Theam_0503 ab3c5bcbeea66948ed1f5364a1db1678 92 SUPERFAMILY SSF160544 4 81 4.84E-26 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Theam_1742 7b772c433d21054bb72adb7749faa0c5 309 Gene3D G3DSA:3.30.420.40 7 303 1.2E-36 T 13-10-2018 Theam_1742 7b772c433d21054bb72adb7749faa0c5 309 Gene3D G3DSA:3.30.420.40 154 289 1.2E-36 T 13-10-2018 Theam_1742 7b772c433d21054bb72adb7749faa0c5 309 SUPERFAMILY SSF53067 157 305 4.49E-17 T 13-10-2018 Theam_1742 7b772c433d21054bb72adb7749faa0c5 309 SUPERFAMILY SSF53067 7 151 2.27E-8 T 13-10-2018 Theam_1623 642173ade14b5db9eaf90c13bab676aa 272 Pfam PF01881 CRISPR associated protein Cas6 123 270 2.4E-27 T 13-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Theam_1623 642173ade14b5db9eaf90c13bab676aa 272 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 39 269 5.9E-30 T 13-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Theam_1623 642173ade14b5db9eaf90c13bab676aa 272 Gene3D G3DSA:3.30.70.1900 153 272 1.5E-13 T 13-10-2018 Theam_1349 bf691250bf59561021d1dc002bb93bd9 266 Pfam PF12679 ABC-2 family transporter protein 37 266 4.8E-8 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Theam_0197 5c15b1e890cfed760ad9c68bd21b180b 322 SUPERFAMILY SSF51621 39 272 9.42E-48 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Theam_0197 5c15b1e890cfed760ad9c68bd21b180b 322 PIRSF PIRSF015582 28 321 2.2E-62 T 13-10-2018 IPR011206 Citrate lyase beta subunit-like Theam_0197 5c15b1e890cfed760ad9c68bd21b180b 322 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 40 259 1.7E-33 T 13-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Theam_0197 5c15b1e890cfed760ad9c68bd21b180b 322 Gene3D G3DSA:3.20.20.60 31 321 9.7E-73 T 13-10-2018 Theam_0771 e7bb272cd665c70f76feefaa06a3726e 99 Pfam PF02033 Ribosome-binding factor A 5 93 5.6E-20 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Theam_0771 e7bb272cd665c70f76feefaa06a3726e 99 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 99 18.574 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Theam_0771 e7bb272cd665c70f76feefaa06a3726e 99 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 2 92 6.9E-21 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Theam_0771 e7bb272cd665c70f76feefaa06a3726e 99 Gene3D G3DSA:3.30.300.20 1 97 5.7E-23 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Theam_0771 e7bb272cd665c70f76feefaa06a3726e 99 SUPERFAMILY SSF89919 2 93 2.62E-20 T 13-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Theam_0771 e7bb272cd665c70f76feefaa06a3726e 99 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 7 91 3.0E-12 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Theam_0400 fe8aeb3d596df09cb0bb0046c1db847b 374 Pfam PF05552 Conserved TM helix 173 220 2.2E-7 T 13-10-2018 IPR008910 Conserved TM helix Theam_0400 fe8aeb3d596df09cb0bb0046c1db847b 374 Pfam PF05552 Conserved TM helix 83 131 2.0E-13 T 13-10-2018 IPR008910 Conserved TM helix Theam_0561 cf9c0059ed06418afb97f0f5253b4e46 290 SUPERFAMILY SSF52540 12 270 2.4E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_0561 cf9c0059ed06418afb97f0f5253b4e46 290 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 13 251 3.2E-56 T 13-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 Theam_0561 cf9c0059ed06418afb97f0f5253b4e46 290 Gene3D G3DSA:3.40.50.300 2 288 8.0E-61 T 13-10-2018 Theam_0561 cf9c0059ed06418afb97f0f5253b4e46 290 Pfam PF02374 Anion-transporting ATPase 10 254 9.3E-53 T 13-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Theam_1033 eb030a9193fd2025b771b6ef2d14370d 303 Pfam PF01435 Peptidase family M48 66 285 3.6E-38 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Theam_1033 eb030a9193fd2025b771b6ef2d14370d 303 Gene3D G3DSA:3.30.2010.10 60 150 1.6E-30 T 13-10-2018 Theam_1033 eb030a9193fd2025b771b6ef2d14370d 303 Hamap MF_00188 Protease HtpX [htpX]. 5 285 29.042 T 13-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 Theam_1575 ff2f1ca391f944997800f019a6171985 272 SUPERFAMILY SSF51261 105 268 8.5E-54 T 13-10-2018 IPR011055 Duplicated hybrid motif Theam_1575 ff2f1ca391f944997800f019a6171985 272 Gene3D G3DSA:2.70.70.10 117 271 4.4E-49 T 13-10-2018 IPR011055 Duplicated hybrid motif Theam_1575 ff2f1ca391f944997800f019a6171985 272 Pfam PF01551 Peptidase family M23 170 264 1.0E-33 T 13-10-2018 IPR016047 Peptidase M23 Theam_0247 36d6daa0cca59e57bda677cd75d30718 284 Gene3D G3DSA:2.70.40.10 146 284 6.3E-28 T 13-10-2018 IPR036157 dUTPase-like superfamily Theam_0247 36d6daa0cca59e57bda677cd75d30718 284 SUPERFAMILY SSF51283 149 284 7.46E-25 T 13-10-2018 IPR036157 dUTPase-like superfamily Theam_0247 36d6daa0cca59e57bda677cd75d30718 284 Pfam PF00692 dUTPase 162 284 1.1E-7 T 13-10-2018 IPR029054 dUTPase-like Theam_0882 d547daff65b832fa6d9571870f0ec695 396 Pfam PF12704 MacB-like periplasmic core domain 20 207 4.5E-23 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Theam_0882 d547daff65b832fa6d9571870f0ec695 396 Pfam PF02687 FtsX-like permease family 301 388 4.7E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Theam_1684 2c01c2ff0f2fd200a2c71c8af323f4b0 1376 Gene3D G3DSA:1.10.1130.10 499 609 3.2E-6 T 13-10-2018 Theam_1684 2c01c2ff0f2fd200a2c71c8af323f4b0 1376 SUPERFAMILY SSF48695 28 621 1.18E-12 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_1270 d2f16c396841f21a84ddf1b4a7879e4f 283 Gene3D G3DSA:3.40.50.11800 50 129 2.0E-6 T 13-10-2018 Theam_1270 d2f16c396841f21a84ddf1b4a7879e4f 283 Pfam PF02754 Cysteine-rich domain 148 237 1.3E-12 T 13-10-2018 IPR004017 Cysteine-rich domain Theam_1270 d2f16c396841f21a84ddf1b4a7879e4f 283 Pfam PF02754 Cysteine-rich domain 4 85 9.6E-12 T 13-10-2018 IPR004017 Cysteine-rich domain Theam_1767 155095954a2557d4461a5aa03b2bb385 229 Pfam PF07505 Protein of unknown function (DUF5131) 2 187 4.1E-36 T 13-10-2018 IPR011101 Protein of unknown function DUF5131 Theam_0086 86748833fa28991c71c55bfaf69582c0 182 SUPERFAMILY SSF117074 23 181 4.97E-23 T 13-10-2018 Theam_0961 f4f4af5dd9a22f49bb612c786e98b38f 251 SUPERFAMILY SSF57414 37 89 2.82E-6 T 13-10-2018 Theam_0961 f4f4af5dd9a22f49bb612c786e98b38f 251 Gene3D G3DSA:3.50.4.10 26 94 2.0E-5 T 13-10-2018 Theam_1126 f5f6a506fff626efded995d370bc14f7 116 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 113 5.1E-28 T 13-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Theam_1126 f5f6a506fff626efded995d370bc14f7 116 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 115 19.962 T 13-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Theam_1126 f5f6a506fff626efded995d370bc14f7 116 Gene3D G3DSA:3.30.2320.80 1 116 2.4E-31 T 13-10-2018 Theam_1126 f5f6a506fff626efded995d370bc14f7 116 PIRSF PIRSF004761 1 116 1.5E-30 T 13-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Theam_0131 81fcdd3292c98ffd2127e3f03cd03764 80 Pfam PF02325 YGGT family 8 76 6.6E-13 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 Theam_0320 7886b38022b228c6077704866bf6f7f8 115 Pfam PF13488 Glycine zipper 31 72 5.0E-6 T 13-10-2018 IPR039567 Glycine zipper domain Theam_0454 566aa537738fbc0cd7cbce5838249027 356 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 56 1.5E-7 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Theam_0454 566aa537738fbc0cd7cbce5838249027 356 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 165 354 7.2E-30 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Theam_0454 566aa537738fbc0cd7cbce5838249027 356 SUPERFAMILY SSF161098 142 340 1.1E-25 T 13-10-2018 IPR035906 MetI-like superfamily Theam_0454 566aa537738fbc0cd7cbce5838249027 356 Gene3D G3DSA:1.10.3720.10 137 356 3.6E-22 T 13-10-2018 IPR035906 MetI-like superfamily Theam_0956 f14e120738e3535f5d9aded67ad680d6 284 Pfam PF13189 Cytidylate kinase-like family 76 264 1.2E-36 T 13-10-2018 Theam_0956 f14e120738e3535f5d9aded67ad680d6 284 Gene3D G3DSA:3.40.50.300 71 280 4.7E-39 T 13-10-2018 Theam_0451 b29e3a614aa1b514ca3342625f1fe539 207 Gene3D G3DSA:1.20.120.1760 7 203 8.5E-33 T 13-10-2018 Theam_0451 b29e3a614aa1b514ca3342625f1fe539 207 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 90 5.5E-13 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Theam_0193 94bf9a08c13343e4cd393360bdbc0f55 300 SUPERFAMILY SSF81345 11 294 2.48E-49 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Theam_0193 94bf9a08c13343e4cd393360bdbc0f55 300 Pfam PF01032 FecCD transport family 25 294 1.1E-55 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Theam_0193 94bf9a08c13343e4cd393360bdbc0f55 300 Gene3D G3DSA:1.10.3470.10 1 296 1.9E-59 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Theam_0959 ce04d968815d0307f410771519cb82f9 385 Pfam PF01098 Cell cycle protein 8 366 2.6E-81 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Theam_1361 283d24fc42d7c334e92f1a3c430e4e0c 83 Pfam PF11127 Protein of unknown function (DUF2892) 13 66 1.1E-9 T 13-10-2018 IPR021309 Protein of unknown function DUF2892 Theam_0936 2e8d19627f5a924b674f512d29b9ed47 342 Gene3D G3DSA:3.40.50.20 14 122 4.8E-6 T 13-10-2018 Theam_0936 2e8d19627f5a924b674f512d29b9ed47 342 Gene3D G3DSA:3.30.1490.20 123 168 1.2E-6 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Theam_0936 2e8d19627f5a924b674f512d29b9ed47 342 Gene3D G3DSA:3.30.470.20 200 316 1.1E-11 T 13-10-2018 Theam_0936 2e8d19627f5a924b674f512d29b9ed47 342 SUPERFAMILY SSF56059 129 338 1.15E-30 T 13-10-2018 Theam_0936 2e8d19627f5a924b674f512d29b9ed47 342 Pfam PF02655 ATP-grasp domain 189 280 9.8E-7 T 13-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 Theam_1495 0d0e9115453c37f599bdc7fb0b4f920f 389 SUPERFAMILY SSF56762 44 389 2.35E-102 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1495 0d0e9115453c37f599bdc7fb0b4f920f 389 Gene3D G3DSA:1.10.645.20 31 389 6.4E-119 T 13-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1495 0d0e9115453c37f599bdc7fb0b4f920f 389 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 315 389 1.4E-23 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1495 0d0e9115453c37f599bdc7fb0b4f920f 389 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 146 311 1.8E-50 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Theam_1442 723a3761af1ee3bfed8a6af4560e5fde 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.4E-19 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Theam_1442 723a3761af1ee3bfed8a6af4560e5fde 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.4E-19 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Theam_1442 723a3761af1ee3bfed8a6af4560e5fde 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.4E-19 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Theam_1442 723a3761af1ee3bfed8a6af4560e5fde 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.2E-26 T 13-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 Theam_1442 723a3761af1ee3bfed8a6af4560e5fde 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 4.9E-27 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Theam_1442 723a3761af1ee3bfed8a6af4560e5fde 89 PIRSF PIRSF004669 1 89 7.2E-29 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Theam_0986 65c4310a647d79ff7abeaaa0ebc28f5f 565 Pfam PF03415 Clostripain family 200 489 2.0E-50 T 13-10-2018 IPR005077 Peptidase C11, clostripain Theam_0986 65c4310a647d79ff7abeaaa0ebc28f5f 565 Gene3D G3DSA:3.40.50.11970 189 294 6.9E-14 T 13-10-2018 Theam_1564 e22915b131d2727c13a60efdc938aec9 355 Pfam PF03734 L,D-transpeptidase catalytic domain 93 223 1.2E-18 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Theam_1564 e22915b131d2727c13a60efdc938aec9 355 SUPERFAMILY SSF141523 93 224 1.44E-14 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Theam_1564 e22915b131d2727c13a60efdc938aec9 355 SUPERFAMILY SSF54427 238 350 1.31E-5 T 13-10-2018 IPR032710 NTF2-like domain superfamily Theam_1564 e22915b131d2727c13a60efdc938aec9 355 Gene3D G3DSA:2.40.440.10 64 258 1.3E-13 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Theam_1553 23fb8ca534fa48c08033fbc8f503a38e 355 Gene3D G3DSA:3.40.50.1010 67 187 3.4E-6 T 13-10-2018 Theam_0447 91f4ed736f8e7d4ad991c040f799d9ee 111 TIGRFAM TIGR00332 neela_ferrous: desulfoferrodoxin ferrous iron-binding domain 10 104 1.2E-22 T 13-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 Theam_0447 91f4ed736f8e7d4ad991c040f799d9ee 111 SUPERFAMILY SSF49367 9 103 2.49E-28 T 13-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 Theam_0447 91f4ed736f8e7d4ad991c040f799d9ee 111 Gene3D G3DSA:2.60.40.730 2 109 8.6E-33 T 13-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 Theam_0447 91f4ed736f8e7d4ad991c040f799d9ee 111 Pfam PF01880 Desulfoferrodoxin 10 102 3.1E-31 T 13-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 Theam_0322 e2cf6dc7e9f9781539aaaeea3f19515d 144 SUPERFAMILY SSF141694 2 40 4.18E-7 T 13-10-2018 Theam_0322 e2cf6dc7e9f9781539aaaeea3f19515d 144 Pfam PF01954 Protein of unknown function DUF104 2 33 8.3E-5 T 13-10-2018 IPR008203 Uncharacterised protein family UPF0165 Theam_1374 0b763d093ce649d399bc76fc5f3b4591 68 Gene3D G3DSA:1.10.3910.10 5 68 2.5E-9 T 13-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Theam_1374 0b763d093ce649d399bc76fc5f3b4591 68 SUPERFAMILY SSF140683 6 66 1.31E-5 T 13-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Theam_0603 92a89f592655cb9fc23ced820a99edc5 281 Pfam PF05681 Fumarate hydratase (Fumerase) 11 279 2.9E-119 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Theam_0603 92a89f592655cb9fc23ced820a99edc5 281 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 9 279 2.9E-108 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Theam_0541 e574a5ca48339011b736647dd1f7d5a5 51 Gene3D G3DSA:2.20.28.10 1 46 8.4E-6 T 13-10-2018 Theam_0541 e574a5ca48339011b736647dd1f7d5a5 51 Pfam PF09723 Zinc ribbon domain 1 39 4.2E-11 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Theam_1350 a795f998530fde44761e9453793bd01b 292 Pfam PF00005 ABC transporter 26 166 3.1E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Theam_1350 a795f998530fde44761e9453793bd01b 292 SUPERFAMILY SSF52540 3 228 6.88E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Theam_1350 a795f998530fde44761e9453793bd01b 292 SMART SM00382 34 215 3.6E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Theam_1350 a795f998530fde44761e9453793bd01b 292 Gene3D G3DSA:3.40.50.300 2 234 5.5E-50 T 13-10-2018 Theam_1347 e1c09dd6b10ac87778b9a2b31fdd30c4 648 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 7 637 12.546 T 13-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 Theam_1347 e1c09dd6b10ac87778b9a2b31fdd30c4 648 Pfam PF04453 Organic solvent tolerance protein 264 543 1.1E-11 T 13-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 Theam_1338 ec138d2dcf869b92b579fff429a91778 123 Gene3D G3DSA:3.30.420.130 1 123 6.8E-27 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Theam_1338 ec138d2dcf869b92b579fff429a91778 123 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 17 107 1.8E-19 T 13-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Theam_1338 ec138d2dcf869b92b579fff429a91778 123 SUPERFAMILY SSF53146 1 122 4.19E-25 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Theam_0430 c6f9c6a18c0dd180be61d0f82ff12cdd 362 Gene3D G3DSA:3.40.1280.30 95 218 6.3E-6 T 13-10-2018 IPR038459 tRNA methyltransferase TRM10-type domain superfamily Theam_0685 519bf3f9292236f4e5cca3f2e539a3ce 115 Pfam PF11823 Protein of unknown function (DUF3343) 37 103 7.3E-12 T 13-10-2018 IPR021778 Domain of unknown function DUF3343 Theam_0413 e68c6b245c2c6f870e614d8237e3dbda 392 Gene3D G3DSA:1.20.1530.20 2 371 2.2E-55 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily Theam_0413 e68c6b245c2c6f870e614d8237e3dbda 392 Pfam PF00999 Sodium/hydrogen exchanger family 10 358 2.9E-46 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Theam_0886 95d79d68c44a1d8fb4919185f238bb47 148 Pfam PF01986 Domain of unknown function DUF123 25 114 9.0E-26 T 13-10-2018 IPR002837 Protein of unknown function DUF123 Theam_1815 cab7d9cb11c3acc98347de88167d8898 65 Pfam PF11211 Protein of unknown function (DUF2997) 7 51 2.0E-15 T 13-10-2018 IPR021375 Protein of unknown function DUF2997 Theam_0727 b1c0dcd21b0e5c476b6ad36cfc65cd34 200 SUPERFAMILY SSF52833 2 188 1.43E-58 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Theam_0727 b1c0dcd21b0e5c476b6ad36cfc65cd34 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 183 8.7E-8 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Theam_0727 b1c0dcd21b0e5c476b6ad36cfc65cd34 200 Pfam PF00578 AhpC/TSA family 4 135 5.2E-37 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Theam_0727 b1c0dcd21b0e5c476b6ad36cfc65cd34 200 Gene3D G3DSA:3.40.30.10 1 189 1.6E-63 T 13-10-2018 Theam_0727 b1c0dcd21b0e5c476b6ad36cfc65cd34 200 PIRSF PIRSF000239 1 198 5.9E-49 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Theam_1155 0841bbe70698cc2da12c354a0f854ec5 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 3 146 6.1E-9 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Theam_1155 0841bbe70698cc2da12c354a0f854ec5 183 SUPERFAMILY SSF56300 1 167 1.46E-21 T 13-10-2018 Theam_1155 0841bbe70698cc2da12c354a0f854ec5 183 Gene3D G3DSA:3.60.21.10 1 182 8.4E-43 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Theam_0679 0b93c513aa651b47dc1fdf3e9cc206a8 171 Pfam PF10756 Bacterial PH domain 61 108 4.7E-8 T 13-10-2018 IPR019692 Protein of unknown function DUF2581 Theam_1453 d416b1d07eee93269f4c5cf7e6931008 124 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 4 121 6.9E-19 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Theam_1453 d416b1d07eee93269f4c5cf7e6931008 124 PIRSF PIRSF002889 1 124 1.5E-21 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Theam_1051 6b282d69fc04e1148eaa2ccb658553bb 375 Pfam PF09376 NurA domain 55 350 2.3E-34 T 13-10-2018 IPR018977 NurA domain Theam_1051 6b282d69fc04e1148eaa2ccb658553bb 375 SMART SM00933 54 350 7.6E-24 T 13-10-2018 IPR018977 NurA domain Theam_0891 65707556af57e5722750489bfd69f158 209 Gene3D G3DSA:2.170.120.30 28 136 2.8E-6 T 13-10-2018 Theam_1415 44d6a8b145e4c2de347e1247afb75856 444 SUPERFAMILY SSF69322 74 436 1.44E-5 T 13-10-2018 Theam_1462 605c8ec2162d7fa834c05837fa004a4e 231 Hamap MF_00415 Flagellar L-ring protein [flgH]. 6 229 25.031 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Theam_1462 605c8ec2162d7fa834c05837fa004a4e 231 Pfam PF02107 Flagellar L-ring protein 49 230 7.7E-56 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Theam_1462 605c8ec2162d7fa834c05837fa004a4e 231 PRINTS PR01008 Flagellar L-ring protein signature 192 206 2.4E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Theam_1462 605c8ec2162d7fa834c05837fa004a4e 231 PRINTS PR01008 Flagellar L-ring protein signature 69 81 2.4E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Theam_1462 605c8ec2162d7fa834c05837fa004a4e 231 PRINTS PR01008 Flagellar L-ring protein signature 171 187 2.4E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Theam_1462 605c8ec2162d7fa834c05837fa004a4e 231 PRINTS PR01008 Flagellar L-ring protein signature 208 222 2.4E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Theam_1462 605c8ec2162d7fa834c05837fa004a4e 231 PRINTS PR01008 Flagellar L-ring protein signature 145 160 2.4E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Theam_0477 d37940bfbf9f1e92f237ae69b7733947 100 SUPERFAMILY SSF48695 12 85 3.83E-8 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_1183 26f372fd650ac9cc69455dd56a6f8a2e 216 SUPERFAMILY SSF55620 1 213 1.73E-32 T 13-10-2018 Theam_1183 26f372fd650ac9cc69455dd56a6f8a2e 216 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 214 1.2E-32 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Theam_1183 26f372fd650ac9cc69455dd56a6f8a2e 216 Gene3D G3DSA:3.30.479.10 1 216 2.9E-63 T 13-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 Theam_1160 769e7da651336515cfdedf4932e10ce7 449 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 227 427 5.2E-23 T 13-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Theam_1160 769e7da651336515cfdedf4932e10ce7 449 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 14 109 2.1E-15 T 13-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 Theam_1469 a1bd6b168969b670c731d2a25597e52b 167 Pfam PF03350 Uncharacterized protein family, UPF0114 12 134 1.3E-35 T 13-10-2018 IPR005134 Uncharacterised protein family UPF0114 Theam_1469 a1bd6b168969b670c731d2a25597e52b 167 PIRSF PIRSF026509 1 167 2.5E-48 T 13-10-2018 IPR005134 Uncharacterised protein family UPF0114 Theam_0782 fa63d90ce5a43f0edbe991e92f22ac96 291 SUPERFAMILY SSF48695 189 285 6.49E-5 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_0782 fa63d90ce5a43f0edbe991e92f22ac96 291 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 69 109 1.4E-4 T 13-10-2018 IPR010177 Doubled CXXCH motif Theam_0782 fa63d90ce5a43f0edbe991e92f22ac96 291 SUPERFAMILY SSF48695 28 226 1.4E-17 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Theam_0808 0bb2d0faa293c922626fe71ed93f2ec9 456 Pfam PF16933 Putative exopolysaccharide Exporter (EPS-E) 1 453 3.4E-129 T 13-10-2018 IPR031617 Putative exopolysaccharide exporter Theam_1097 441333ffbc26bea89bb9b5b484140dcf 84 Pfam PF16256 Domain of unknown function (DUF4911) 13 65 5.9E-11 T 13-10-2018 IPR032587 Protein of unknown function DUF4911 Theam_1258 2060b3cc2d67a2113e6b0e53e5faebd1 353 Pfam PF01594 AI-2E family transporter 10 337 1.8E-58 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like Theam_0571 badc405dea867fde9c7d5456e332819b 221 Pfam PF14681 Uracil phosphoribosyltransferase 14 204 7.3E-52 T 13-10-2018 Theam_0571 badc405dea867fde9c7d5456e332819b 221 Gene3D G3DSA:3.40.50.2020 5 204 3.1E-60 T 13-10-2018 Theam_0571 badc405dea867fde9c7d5456e332819b 221 SUPERFAMILY SSF53271 9 201 3.55E-47 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Theam_0342 3e1571af7dcbe3885f3047a52cca2942 1031 TIGRFAM TIGR02682 cas_csx11: CRISPR-associated protein, Csx11 family 5 1027 1.6E-200 T 13-10-2018 IPR014055 CRISPR-associated protein, Csx11 Theam_1278 df63483285f5ad0a07d311820ecf2ea9 443 Pfam PF00939 Sodium:sulfate symporter transmembrane region 8 435 6.2E-52 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Theam_1278 df63483285f5ad0a07d311820ecf2ea9 443 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 389 405 - T 13-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 Theam_1278 df63483285f5ad0a07d311820ecf2ea9 443 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 30 435 1.4E-104 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Theam_1243 2f69c8ee60b8fc536c1fe644086df20d 159 Pfam PF10947 Protein of unknown function (DUF2628) 27 98 1.2E-9 T 13-10-2018 IPR024399 Protein of unknown function DUF2628 Theam_1820 100d07b246172832980faed9e0ac01de 354 Gene3D G3DSA:3.90.320.10 2 235 1.8E-12 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Theam_1664 8d5e005547d0d5abb89df12ebe0f254e 441 Gene3D G3DSA:1.20.1740.10 1 437 2.0E-106 T 13-10-2018 Theam_1664 8d5e005547d0d5abb89df12ebe0f254e 441 PIRSF PIRSF006060 1 435 1.3E-59 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Theam_1664 8d5e005547d0d5abb89df12ebe0f254e 441 Pfam PF13520 Amino acid permease 8 409 2.2E-32 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Theam_0203 b9484ec61222f7cefd9229fec01c5fef 401 Pfam PF01435 Peptidase family M48 150 391 3.0E-9 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Theam_1290 43224b436b0aaa9cc08f6855da0c92cd 520 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 60 219 4.5E-21 T 13-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Theam_0907 c57b20186ab205b6bcabedb154eb5eec 375 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 366 1.7E-105 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Theam_0907 c57b20186ab205b6bcabedb154eb5eec 375 SUPERFAMILY SSF56796 1 373 1.09E-106 T 13-10-2018 Theam_0907 c57b20186ab205b6bcabedb154eb5eec 375 Gene3D G3DSA:3.40.50.1970 1 183 5.1E-54 T 13-10-2018 Theam_0907 c57b20186ab205b6bcabedb154eb5eec 375 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Theam_0907 c57b20186ab205b6bcabedb154eb5eec 375 Gene3D G3DSA:1.20.1090.10 184 374 1.8E-54 T 13-10-2018 Theam_0901 f7a936aa95c37fb917ec65ce9c094a83 202 Pfam PF04350 Pilus assembly protein, PilO 47 171 3.5E-15 T 13-10-2018 IPR007445 Pilus assembly protein, PilO Theam_0901 f7a936aa95c37fb917ec65ce9c094a83 202 Gene3D G3DSA:3.30.70.60 91 201 6.1E-11 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Theam_0025 d5506c59462f1d493700e62d53b2ec9a 373 Pfam PF17236 Family of unknown function (DUF5309) 151 366 5.8E-25 T 13-10-2018 IPR035198 Protein of unknown function DUF5309 Theam_1728 2845ffca04f3fc3aa49d7106ec3bbbba 282 Pfam PF11306 Protein of unknown function (DUF3108) 22 249 7.1E-37 T 13-10-2018 IPR021457 Protein of unknown function DUF3108 Theam_0830 0568e4754248cb2c7b120b3e9f2acfad 124 Pfam PF04519 Polymer-forming cytoskeletal 17 111 7.5E-24 T 13-10-2018 IPR007607 Bactofilin A/B Theam_1694 423186bbffa49cfe1ea8586a6c6d9fe9 321 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 89 311 1.6E-23 T 13-10-2018 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 Theam_1209 d4e05e0e6d366ea06cfeb85fd491cb43 295 Pfam PF03547 Membrane transport protein 155 286 4.0E-16 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Theam_1209 d4e05e0e6d366ea06cfeb85fd491cb43 295 Pfam PF03547 Membrane transport protein 8 144 1.3E-9 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Theam_0712 9d506b202b676ff4aa503bf31455e048 459 SUPERFAMILY SSF51569 87 448 5.49E-64 T 13-10-2018 Theam_0712 9d506b202b676ff4aa503bf31455e048 459 Gene3D G3DSA:3.20.20.70 76 409 2.6E-48 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Theam_0712 9d506b202b676ff4aa503bf31455e048 459 Pfam PF01116 Fructose-bisphosphate aldolase class-II 88 384 2.1E-13 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Theam_1795 a271640e12b724bb66dc2649c83e7b48 705 Pfam PF03415 Clostripain family 283 482 1.3E-20 T 13-10-2018 IPR005077 Peptidase C11, clostripain Theam_1011 195f6622f3a3ad63adffdfef843c0fda 528 Pfam PF02470 MlaD protein 40 114 3.4E-17 T 13-10-2018 IPR003399 Mce/MlaD Theam_1449 4a1d2ab8a17cf4b06d43bf42a2588a18 213 SUPERFAMILY SSF58113 28 148 4.45E-5 T 13-10-2018 Theam_0435 b86bb86efd0fdbdd97bf44bcf17393a8 211 Pfam PF09335 SNARE associated Golgi protein 54 170 4.5E-18 T 13-10-2018 IPR032816 SNARE associated Golgi protein Theam_0696 8c8e7450377feddb04e36bbe60bb6628 52 Pfam PF01920 Prefoldin subunit 8 51 4.3E-7 T 13-10-2018 IPR002777 Prefoldin beta-like GO:0006457|GO:0016272|GO:0051082 Reactome: R-HSA-389957 Theam_0696 8c8e7450377feddb04e36bbe60bb6628 52 SUPERFAMILY SSF46579 7 50 8.11E-8 T 13-10-2018 Theam_0696 8c8e7450377feddb04e36bbe60bb6628 52 Gene3D G3DSA:1.10.287.370 1 52 1.2E-6 T 13-10-2018 IPR009053 Prefoldin Theam_1787 9c6aaaf7b072a67a5365c3ac7fec1d5d 276 Pfam PF06586 TraK protein 142 249 1.2E-7 T 13-10-2018 IPR010563 Pilus assembly TraK Theam_1779 f167b34ca628cdfff6dd8b9e871e74c6 163 Pfam PF10130 PIN domain 53 145 3.6E-6 T 13-10-2018 IPR002716 PIN domain Theam_1483 a5ecfcee9a17c7126c36e792cc3fdf7e 163 Pfam PF04463 Protein of unknown function (DUF523) 5 151 1.4E-37 T 13-10-2018 IPR007553 Domain of unknown function DUF523 Theam_0415 37d3447c94853ace7af3673a243f0e92 201 Pfam PF11845 Protein of unknown function (DUF3365) 9 194 5.5E-28 T 13-10-2018 IPR021796 Protein of unknown function DUF3365 Theam_1153 1995a3a1bdcedccf053947e7e6c01020 176 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 12 170 3.5E-6 T 13-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related Theam_0030 e1a0b001d7125d55ce0af98e48196ef6 186 Gene3D G3DSA:1.10.10.60 137 180 4.4E-6 T 13-10-2018 Theam_1601 404e44bd286df61564409d3c2c3eaaf2 192 Pfam PF09335 SNARE associated Golgi protein 27 147 1.0E-12 T 13-10-2018 IPR032816 SNARE associated Golgi protein Theam_0535 24eac0145f701ec25db9841067913981 77 Gene3D G3DSA:1.20.58.660 2 77 1.4E-9 T 13-10-2018 Theam_0535 24eac0145f701ec25db9841067913981 77 Pfam PF04325 Protein of unknown function (DUF465) 18 66 3.6E-11 T 13-10-2018 IPR007420 Protein of unknown function DUF465 Theam_0590 34ed22cb91817cccf0a31f8b33293087 260 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 4 260 1.7E-43 T 13-10-2018 IPR026387 Outer membrane protein Theam_0107 f27610ed98c59e81e9458713d4466a49 208 Pfam PF02163 Peptidase family M50 129 161 2.9E-7 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Theam_0594 77b9148574a6655fec23ac6890d5ae56 424 Pfam PF04932 O-Antigen ligase 194 357 1.6E-12 T 13-10-2018 IPR007016 O-antigen ligase-related Theam_1786 a20da3197eb76a8dbf564f63a0d56f46 415 Pfam PF03743 Bacterial conjugation TrbI-like protein 192 393 1.9E-11 T 13-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Theam_1039 780fc622eff513e2ab4ff480f94c43f7 412 Pfam PF01554 MatE 9 161 2.0E-18 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Theam_1039 780fc622eff513e2ab4ff480f94c43f7 412 Pfam PF01554 MatE 221 373 4.0E-8 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Theam_0341 f671675e958523578885fc1a9f9b3f3b 395 Pfam PF03787 RAMP superfamily 22 377 2.5E-24 T 13-10-2018 IPR005537 CRISPR type III-associated RAMP protein Theam_1047 af7d2226912bf2846e694ff89dbfdfa7 108 Pfam PF10114 Sensory domain found in PocR 10 102 1.4E-6 T 13-10-2018 IPR018771 PocR domain Theam_0792 b5a8405345eda3b91fd6e658cbdafe7a 609 Pfam PF05036 Sporulation related domain 25 93 3.7E-8 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Theam_0792 b5a8405345eda3b91fd6e658cbdafe7a 609 Gene3D G3DSA:2.40.160.100 243 607 3.5E-69 T 13-10-2018 Theam_0417 63d746413b5cbbd7df0d6fa3643f5143 304 Pfam PF04468 PSP1 C-terminal conserved region 70 153 1.5E-22 T 13-10-2018 IPR007557 PSP1, C-terminal Theam_0395 d4c9acb9280cca81fbdb94136295cbef 226 SUPERFAMILY SSF52833 102 216 1.01E-5 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Theam_0167 3f5a329181a2da2e0d21157a6885073b 380 Pfam PF09511 RNA ligase 47 241 7.7E-25 T 13-10-2018 IPR019039 RNA ligase T4 Rnl1, N-terminal Theam_0818 b236848d01505220036b0b34e1476203 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 343 1.1E-53 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Theam_0092 ea0d3e2c83fdcd4972edee5527243542 518 Pfam PF02538 Hydantoinase B/oxoprolinase 3 517 3.7E-199 T 13-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998