locus-tag class description Tlie_0001 PF00308 Bacterial dnaA protein Tlie_0001 PF08299 Bacterial dnaA protein helix-turn-helix Tlie_0001 PF11638 DnaA N-terminal domain Tlie_0002 PF02767 DNA polymerase III beta subunit, central domain Tlie_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Tlie_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Tlie_0003 PF02463 RecF/RecN/SMC N terminal domain Tlie_0004 PF13932 GidA associated domain Tlie_0004 PF01134 Glucose inhibited division protein A Tlie_0008 PF03606 C4-dicarboxylate anaerobic carrier Tlie_0009 PF00872 Transposase, Mutator family Tlie_0010 PF07969 Amidohydrolase family Tlie_0012 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Tlie_0012 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Tlie_0014 PF03553 Na+/H+ antiporter family Tlie_0015 PF02080 TrkA-C domain Tlie_0016 PF03372 Endonuclease/Exonuclease/phosphatase family Tlie_0019 PF07687 Peptidase dimerisation domain Tlie_0019 PF01546 Peptidase family M20/M25/M40 Tlie_0020 PF01177 Asp/Glu/Hydantoin racemase Tlie_0026 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tlie_0028 PF00920 Dehydratase family Tlie_0029 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tlie_0030 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Tlie_0031 PF03480 Bacterial extracellular solute-binding protein, family 7 Tlie_0032 PF00392 Bacterial regulatory proteins, gntR family Tlie_0032 PF07729 FCD domain Tlie_0034 PF12822 ECF transporter, substrate-specific component Tlie_0035 PF00989 PAS fold Tlie_0035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tlie_0035 PF00512 His Kinase A (phospho-acceptor) domain Tlie_0035 PF16736 Single Cache-like Tlie_0036 PF00486 Transcriptional regulatory protein, C terminal Tlie_0036 PF00072 Response regulator receiver domain Tlie_0037 PF01895 PhoU domain Tlie_0038 PF00005 ABC transporter Tlie_0039 PF00528 Binding-protein-dependent transport system inner membrane component Tlie_0040 PF00528 Binding-protein-dependent transport system inner membrane component Tlie_0041 PF12849 PBP superfamily domain Tlie_0045 PF05567 Neisseria PilC beta-propeller domain Tlie_0047 PF00210 Ferritin-like domain Tlie_0048 PF01880 Desulfoferrodoxin Tlie_0048 PF06397 Desulfoferrodoxin, N-terminal domain Tlie_0049 PF00301 Rubredoxin Tlie_0051 PF01206 Sulfurtransferase TusA Tlie_0052 PF02769 AIR synthase related protein, C-terminal domain Tlie_0052 PF00586 AIR synthase related protein, N-terminal domain Tlie_0053 PF00437 Type II/IV secretion system protein Tlie_0054 PF02308 MgtC family Tlie_0055 PF07694 5TMR of 5TMR-LYT Tlie_0055 PF00990 Diguanylate cyclase, GGDEF domain Tlie_0056 PF03699 Uncharacterised protein family (UPF0182) Tlie_0057 PF09335 SNARE associated Golgi protein Tlie_0059 PF03313 Serine dehydratase alpha chain Tlie_0060 PF03315 Serine dehydratase beta chain Tlie_0060 PF01842 ACT domain Tlie_0062 PF08334 Type II secretion system (T2SS), protein G Tlie_0062 PF07963 Prokaryotic N-terminal methylation motif Tlie_0064 PF00072 Response regulator receiver domain Tlie_0066 PF07715 TonB-dependent Receptor Plug Domain Tlie_0066 PF00593 TonB dependent receptor Tlie_0067 PF08497 Radical SAM N-terminal Tlie_0067 PF11842 Domain of unknown function (DUF3362) Tlie_0067 PF04055 Radical SAM superfamily Tlie_0068 PF03963 Flagellar hook capping protein - N-terminal region Tlie_0069 PF07559 Flagellar basal body protein FlaE Tlie_0069 PF00460 Flagella basal body rod protein Tlie_0069 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tlie_0070 PF00669 Bacterial flagellin N-terminal helical region Tlie_0070 PF00700 Bacterial flagellin C-terminal helical region Tlie_0071 PF01312 FlhB HrpN YscU SpaS Family Tlie_0072 PF04545 Sigma-70, region 4 Tlie_0072 PF04539 Sigma-70 region 3 Tlie_0072 PF04542 Sigma-70 region 2 Tlie_0074 PF08345 Flagellar M-ring protein C-terminal Tlie_0074 PF01514 Secretory protein of YscJ/FliF family Tlie_0075 PF14842 FliG N-terminal domain Tlie_0075 PF14841 FliG middle domain Tlie_0075 PF01706 FliG C-terminal domain Tlie_0077 PF18269 T3SS EscN ATPase C-terminal domain Tlie_0077 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tlie_0077 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tlie_0079 PF01464 Transglycosylase SLT domain Tlie_0081 PF00771 FHIPEP family Tlie_0082 PF00691 OmpA family Tlie_0082 PF13677 Membrane MotB of proton-channel complex MotA/MotB Tlie_0084 PF07194 P2 response regulator binding domain Tlie_0084 PF02895 Signal transducing histidine kinase, homodimeric domain Tlie_0084 PF01584 CheW-like domain Tlie_0084 PF01627 Hpt domain Tlie_0084 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tlie_0086 PF01618 MotA/TolQ/ExbB proton channel family Tlie_0089 PF00460 Flagella basal body rod protein Tlie_0090 PF00460 Flagella basal body rod protein Tlie_0090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tlie_0091 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tlie_0091 PF00460 Flagella basal body rod protein Tlie_0092 PF04509 CheC-like family Tlie_0092 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Tlie_0093 PF01739 CheR methyltransferase, SAM binding domain Tlie_0093 PF03705 CheR methyltransferase, all-alpha domain Tlie_0094 PF00448 SRP54-type protein, GTPase domain Tlie_0095 PF10609 NUBPL iron-transfer P-loop NTPase Tlie_0097 PF00072 Response regulator receiver domain Tlie_0098 PF00072 Response regulator receiver domain Tlie_0100 PF00813 FliP family Tlie_0101 PF01313 Bacterial export proteins, family 3 Tlie_0102 PF01311 Bacterial export proteins, family 1 Tlie_0105 PF02154 Flagellar motor switch protein FliM Tlie_0105 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Tlie_0106 PF02743 Cache domain Tlie_0106 PF00672 HAMP domain Tlie_0106 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tlie_0107 PF07196 Flagellin hook IN motif Tlie_0107 PF02465 Flagellar hook-associated protein 2 N-terminus Tlie_0107 PF07195 Flagellar hook-associated protein 2 C-terminus Tlie_0110 PF00460 Flagella basal body rod protein Tlie_0110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tlie_0110 PF00460 Flagella basal body rod protein Tlie_0110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tlie_0112 PF02107 Flagellar L-ring protein Tlie_0113 PF02119 Flagellar P-ring protein Tlie_0116 PF03975 CheD chemotactic sensory transduction Tlie_0117 PF04509 CheC-like family Tlie_0118 PF01339 CheB methylesterase Tlie_0118 PF00072 Response regulator receiver domain Tlie_0122 PF04542 Sigma-70 region 2 Tlie_0122 PF04545 Sigma-70, region 4 Tlie_0122 PF00140 Sigma-70 factor, region 1.2 Tlie_0122 PF04539 Sigma-70 region 3 Tlie_0122 PF03979 Sigma-70 factor, region 1.1 Tlie_0123 PF01584 CheW-like domain Tlie_0130 PF00700 Bacterial flagellin C-terminal helical region Tlie_0130 PF00669 Bacterial flagellin N-terminal helical region Tlie_0130 PF00700 Bacterial flagellin C-terminal helical region Tlie_0130 PF00669 Bacterial flagellin N-terminal helical region Tlie_0132 PF02623 FliW protein Tlie_0135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tlie_0135 PF00460 Flagella basal body rod protein Tlie_0136 PF01584 CheW-like domain Tlie_0137 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tlie_0137 PF00205 Thiamine pyrophosphate enzyme, central domain Tlie_0137 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tlie_0138 PF00180 Isocitrate/isopropylmalate dehydrogenase Tlie_0139 PF00694 Aconitase C-terminal domain Tlie_0140 PF00330 Aconitase family (aconitate hydratase) Tlie_0141 PF08502 LeuA allosteric (dimerisation) domain Tlie_0141 PF00682 HMGL-like Tlie_0142 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Tlie_0142 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Tlie_0143 PF10369 Small subunit of acetolactate synthase Tlie_0145 PF00266 Aminotransferase class-V Tlie_0146 PF00300 Histidine phosphatase superfamily (branch 1) Tlie_0147 PF02654 Cobalamin-5-phosphate synthase Tlie_0148 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Tlie_0149 PF02277 Phosphoribosyltransferase Tlie_0152 PF00950 ABC 3 transport family Tlie_0153 PF00005 ABC transporter Tlie_0154 PF01297 Zinc-uptake complex component A periplasmic Tlie_0156 PF03553 Na+/H+ antiporter family Tlie_0160 PF08240 Alcohol dehydrogenase GroES-like domain Tlie_0160 PF00107 Zinc-binding dehydrogenase Tlie_0161 PF03186 CobD/Cbib protein Tlie_0162 PF00155 Aminotransferase class I and II Tlie_0163 PF00288 GHMP kinases N terminal domain Tlie_0164 PF07685 CobB/CobQ-like glutamine amidotransferase domain Tlie_0165 PF02743 Cache domain Tlie_0165 PF00672 HAMP domain Tlie_0165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tlie_0167 PF01053 Cys/Met metabolism PLP-dependent enzyme Tlie_0168 PF00561 alpha/beta hydrolase fold Tlie_0169 PF16123 Hydroxyacylglutathione hydrolase C-terminus Tlie_0169 PF00753 Metallo-beta-lactamase superfamily Tlie_0171 PF01925 Sulfite exporter TauE/SafE Tlie_0172 PF02581 Thiamine monophosphate synthase Tlie_0173 PF08543 Phosphomethylpyrimidine kinase Tlie_0173 PF02581 Thiamine monophosphate synthase Tlie_0181 PF00072 Response regulator receiver domain Tlie_0181 PF00990 Diguanylate cyclase, GGDEF domain Tlie_0182 PF07729 FCD domain Tlie_0182 PF00392 Bacterial regulatory proteins, gntR family Tlie_0184 PF00682 HMGL-like Tlie_0185 PF00155 Aminotransferase class I and II Tlie_0186 PF00209 Sodium:neurotransmitter symporter family Tlie_0189 PF02261 Aspartate decarboxylase Tlie_0190 PF07694 5TMR of 5TMR-LYT Tlie_0190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tlie_0190 PF06580 Histidine kinase Tlie_0191 PF00072 Response regulator receiver domain Tlie_0191 PF04397 LytTr DNA-binding domain Tlie_0192 PF00936 BMC domain Tlie_0193 PF10662 Ethanolamine utilisation - propanediol utilisation Tlie_0194 PF00936 BMC domain Tlie_0195 PF00936 BMC domain Tlie_0196 PF02286 Dehydratase large subunit Tlie_0197 PF02288 Dehydratase medium subunit Tlie_0198 PF02287 Dehydratase small subunit Tlie_0199 PF18427 DD-reactivating factor swiveling domain Tlie_0199 PF08841 Diol dehydratase reactivase ATPase-like domain Tlie_0201 PF00936 BMC domain Tlie_0202 PF00936 BMC domain Tlie_0203 PF06130 Phosphate propanoyltransferase Tlie_0207 PF03319 Ethanolamine utilisation protein EutN/carboxysome Tlie_0208 PF03928 Haem-degrading Tlie_0209 PF00171 Aldehyde dehydrogenase family Tlie_0210 PF13375 RnfC Barrel sandwich hybrid domain Tlie_0210 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tlie_0210 PF13237 4Fe-4S dicluster domain Tlie_0210 PF10531 SLBB domain Tlie_0212 PF00465 Iron-containing alcohol dehydrogenase Tlie_0217 PF00872 Transposase, Mutator family Tlie_0218 PF07729 FCD domain Tlie_0218 PF00392 Bacterial regulatory proteins, gntR family Tlie_0219 PF03480 Bacterial extracellular solute-binding protein, family 7 Tlie_0221 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tlie_0224 PF02915 Rubrerythrin Tlie_0225 PF00258 Flavodoxin Tlie_0225 PF00753 Metallo-beta-lactamase superfamily Tlie_0234 PF00872 Transposase, Mutator family Tlie_0236 PF03787 RAMP superfamily Tlie_0237 PF17953 CRISPR Csm4 C-terminal domain Tlie_0238 PF03787 RAMP superfamily Tlie_0242 PF00872 Transposase, Mutator family Tlie_0245 PF01867 CRISPR associated protein Cas1 Tlie_0246 PF09827 CRISPR associated protein Cas2 Tlie_0251 PF05173 Dihydrodipicolinate reductase, C-terminus Tlie_0251 PF01113 Dihydrodipicolinate reductase, N-terminus Tlie_0254 PF00072 Response regulator receiver domain Tlie_0254 PF00990 Diguanylate cyclase, GGDEF domain Tlie_0255 PF01487 Type I 3-dehydroquinase Tlie_0257 PF03553 Na+/H+ antiporter family Tlie_0258 PF07729 FCD domain Tlie_0258 PF00392 Bacterial regulatory proteins, gntR family Tlie_0259 PF00689 Cation transporting ATPase, C-terminus Tlie_0259 PF00690 Cation transporter/ATPase, N-terminus Tlie_0267 PF01867 CRISPR associated protein Cas1 Tlie_0268 PF09827 CRISPR associated protein Cas2 Tlie_0270 PF00072 Response regulator receiver domain Tlie_0271 PF01235 Sodium:alanine symporter family Tlie_0272 PF00857 Isochorismatase family Tlie_0272 PF00550 Phosphopantetheine attachment site Tlie_0273 PF00005 ABC transporter Tlie_0276 PF12724 Flavodoxin domain Tlie_0277 PF07286 Protein of unknown function (DUF1445) Tlie_0278 PF03746 LamB/YcsF family Tlie_0279 PF02626 Carboxyltransferase domain, subdomain A and B Tlie_0280 PF02682 Carboxyltransferase domain, subdomain C and D Tlie_0281 PF01566 Natural resistance-associated macrophage protein Tlie_0282 PF00309 Sigma-54 factor, Activator interacting domain (AID) Tlie_0282 PF04552 Sigma-54, DNA binding domain Tlie_0282 PF04963 Sigma-54 factor, core binding domain Tlie_0283 PF00158 Sigma-54 interaction domain Tlie_0283 PF02954 Bacterial regulatory protein, Fis family Tlie_0283 PF00072 Response regulator receiver domain Tlie_0284 PF00989 PAS fold Tlie_0284 PF00512 His Kinase A (phospho-acceptor) domain Tlie_0284 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tlie_0286 PF00155 Aminotransferase class I and II Tlie_0289 PF00581 Rhodanese-like domain Tlie_0290 PF00872 Transposase, Mutator family Tlie_0291 PF02310 B12 binding domain Tlie_0291 PF02965 Vitamin B12 dependent methionine synthase, activation domain Tlie_0291 PF00809 Pterin binding enzyme Tlie_0291 PF02574 Homocysteine S-methyltransferase Tlie_0291 PF02607 B12 binding domain Tlie_0292 PF02219 Methylenetetrahydrofolate reductase Tlie_0293 PF03328 HpcH/HpaI aldolase/citrate lyase family Tlie_0294 PF02867 Ribonucleotide reductase, barrel domain Tlie_0294 PF00317 Ribonucleotide reductase, all-alpha domain Tlie_0294 PF03477 ATP cone domain Tlie_0295 PF04960 Glutaminase Tlie_0296 PF01268 Formate--tetrahydrofolate ligase Tlie_0297 PF00258 Flavodoxin Tlie_0298 PF00501 AMP-binding enzyme Tlie_0298 PF14535 AMP-binding enzyme C-terminal domain Tlie_0300 PF04073 Aminoacyl-tRNA editing domain Tlie_0302 PF08331 Domain of unknown function (DUF1730) Tlie_0306 PF01555 DNA methylase Tlie_0307 PF04556 DpnII restriction endonuclease Tlie_0310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tlie_0312 PF03480 Bacterial extracellular solute-binding protein, family 7 Tlie_0314 PF04011 LemA family Tlie_0315 PF01751 Toprim domain Tlie_0315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tlie_0315 PF00986 DNA gyrase B subunit, carboxyl terminus Tlie_0315 PF00204 DNA gyrase B Tlie_0318 PF12705 PD-(D/E)XK nuclease superfamily Tlie_0318 PF13361 UvrD-like helicase C-terminal domain Tlie_0318 PF00580 UvrD/REP helicase N-terminal domain Tlie_0322 PF07690 Major Facilitator Superfamily Tlie_0325 PF01588 Putative tRNA binding domain Tlie_0327 PF17746 SfsA N-terminal OB domain Tlie_0327 PF03749 Sugar fermentation stimulation protein RE domain Tlie_0328 PF01022 Bacterial regulatory protein, arsR family Tlie_0335 PF07969 Amidohydrolase family Tlie_0336 PF12544 Lysine-2,3-aminomutase Tlie_0336 PF04055 Radical SAM superfamily Tlie_0337 PF01546 Peptidase family M20/M25/M40 Tlie_0337 PF07687 Peptidase dimerisation domain Tlie_0338 PF00474 Sodium:solute symporter family Tlie_0340 PF00872 Transposase, Mutator family Tlie_0342 PF12323 Helix-turn-helix domain Tlie_0342 PF01385 Probable transposase Tlie_0342 PF07282 Putative transposase DNA-binding domain Tlie_0345 PF07690 Major Facilitator Superfamily Tlie_0345 PF00083 Sugar (and other) transporter Tlie_0346 PF01546 Peptidase family M20/M25/M40 Tlie_0348 PF00005 ABC transporter Tlie_0348 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tlie_0349 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tlie_0349 PF00005 ABC transporter Tlie_0350 PF12911 N-terminal TM domain of oligopeptide transport permease C Tlie_0350 PF00528 Binding-protein-dependent transport system inner membrane component Tlie_0351 PF00528 Binding-protein-dependent transport system inner membrane component Tlie_0352 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tlie_0353 PF02811 PHP domain Tlie_0353 PF14716 Helix-hairpin-helix domain Tlie_0353 PF14791 DNA polymerase beta thumb Tlie_0354 PF07883 Cupin domain Tlie_0355 PF07690 Major Facilitator Superfamily Tlie_0356 PF00881 Nitroreductase family Tlie_0357 PF00990 Diguanylate cyclase, GGDEF domain Tlie_0357 PF05230 MASE2 domain Tlie_0358 PF01966 HD domain Tlie_0358 PF01743 Poly A polymerase head domain Tlie_0358 PF12627 Probable RNA and SrmB- binding site of polymerase A Tlie_0361 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Tlie_0361 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Tlie_0362 PF00563 EAL domain Tlie_0362 PF00990 Diguanylate cyclase, GGDEF domain Tlie_0362 PF03707 Bacterial signalling protein N terminal repeat Tlie_0366 PF03600 Citrate transporter Tlie_0367 PF00291 Pyridoxal-phosphate dependent enzyme Tlie_0368 PF06426 Serine acetyltransferase, N-terminal Tlie_0368 PF00132 Bacterial transferase hexapeptide (six repeats) Tlie_0369 PF00491 Arginase family Tlie_0370 PF17391 Urocanase N-terminal domain Tlie_0370 PF17392 Urocanase C-terminal domain Tlie_0370 PF01175 Urocanase Rossmann-like domain Tlie_0371 PF04961 Formiminotransferase-cyclodeaminase Tlie_0372 PF01979 Amidohydrolase family Tlie_0373 PF02971 Formiminotransferase domain Tlie_0373 PF07837 Formiminotransferase domain, N-terminal subdomain Tlie_0374 PF09339 IclR helix-turn-helix domain Tlie_0374 PF01614 Bacterial transcriptional regulator Tlie_0375 PF00378 Enoyl-CoA hydratase/isomerase Tlie_0383 PF00155 Aminotransferase class I and II Tlie_0385 PF01894 Uncharacterised protein family UPF0047 Tlie_0386 PF00982 Glycosyltransferase family 20 Tlie_0387 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Tlie_0390 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tlie_0391 PF01965 DJ-1/PfpI family Tlie_0392 PF00881 Nitroreductase family Tlie_0393 PF03989 DNA gyrase C-terminal domain, beta-propeller Tlie_0393 PF00521 DNA gyrase/topoisomerase IV, subunit A Tlie_0394 PF02666 Phosphatidylserine decarboxylase Tlie_0395 PF01066 CDP-alcohol phosphatidyltransferase Tlie_0396 PF09515 Thiamine transporter protein (Thia_YuaJ) Tlie_0397 PF00291 Pyridoxal-phosphate dependent enzyme Tlie_0400 PF02080 TrkA-C domain Tlie_0400 PF06826 Predicted Permease Membrane Region Tlie_0402 PF02310 B12 binding domain Tlie_0402 PF01642 Methylmalonyl-CoA mutase Tlie_0404 PF01039 Carboxyl transferase domain Tlie_0406 PF00364 Biotin-requiring enzyme Tlie_0407 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Tlie_0408 PF01209 ubiE/COQ5 methyltransferase family Tlie_0410 PF03313 Serine dehydratase alpha chain Tlie_0414 PF00654 Voltage gated chloride channel Tlie_0416 PF01734 Patatin-like phospholipase Tlie_0417 PF03129 Anticodon binding domain Tlie_0417 PF09180 Prolyl-tRNA synthetase, C-terminal Tlie_0417 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tlie_0418 PF01661 Macro domain Tlie_0419 PF01791 DeoC/LacD family aldolase Tlie_0422 PF02811 PHP domain Tlie_0423 PF01212 Beta-eliminating lyase Tlie_0424 PF01523 Putative modulator of DNA gyrase Tlie_0425 PF01520 N-acetylmuramoyl-L-alanine amidase Tlie_0427 PF01138 3' exoribonuclease family, domain 1 Tlie_0427 PF03725 3' exoribonuclease family, domain 2 Tlie_0428 PF01725 Ham1 family Tlie_0429 PF03840 Preprotein translocase SecG subunit Tlie_0431 PF00572 Ribosomal protein L13 Tlie_0432 PF00380 Ribosomal protein S9/S16 Tlie_0433 PF00571 CBS domain Tlie_0433 PF03448 MgtE intracellular N domain Tlie_0433 PF01769 Divalent cation transporter Tlie_0434 PF00440 Bacterial regulatory proteins, tetR family Tlie_0434 PF08361 MAATS-type transcriptional repressor, C-terminal region Tlie_0436 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Tlie_0437 PF00873 AcrB/AcrD/AcrF family Tlie_0440 PF00005 ABC transporter Tlie_0442 PF03144 Elongation factor Tu domain 2 Tlie_0442 PF00009 Elongation factor Tu GTP binding domain Tlie_0442 PF03143 Elongation factor Tu C-terminal domain Tlie_0443 PF00471 Ribosomal protein L33 Tlie_0444 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Tlie_0445 PF00467 KOW motif Tlie_0445 PF02357 Transcription termination factor nusG Tlie_0446 PF00298 Ribosomal protein L11, RNA binding domain Tlie_0446 PF03946 Ribosomal protein L11, N-terminal domain Tlie_0447 PF00687 Ribosomal protein L1p/L10e family Tlie_0448 PF00466 Ribosomal protein L10 Tlie_0449 PF16320 Ribosomal protein L7/L12 dimerisation domain Tlie_0449 PF00542 Ribosomal protein L7/L12 C-terminal domain Tlie_0451 PF07963 Prokaryotic N-terminal methylation motif Tlie_0451 PF00114 Pilin (bacterial filament) Tlie_0456 PF02254 TrkA-N domain Tlie_0456 PF02080 TrkA-C domain Tlie_0456 PF00999 Sodium/hydrogen exchanger family Tlie_0461 PF02086 D12 class N6 adenine-specific DNA methyltransferase Tlie_0463 PF00176 SNF2 family N-terminal domain Tlie_0463 PF00271 Helicase conserved C-terminal domain Tlie_0465 PF09378 HAS barrel domain Tlie_0465 PF01935 Helicase HerA, central domain Tlie_0467 PF12320 Type 5 capsule protein repressor C-terminal domain Tlie_0467 PF00149 Calcineurin-like phosphoesterase Tlie_0471 PF13649 Methyltransferase domain Tlie_0471 PF08241 Methyltransferase domain Tlie_0472 PF02535 ZIP Zinc transporter Tlie_0474 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Tlie_0475 PF03334 Na+/H+ antiporter subunit Tlie_0478 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Tlie_0479 PF00361 Proton-conducting membrane transporter Tlie_0482 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Tlie_0483 PF00528 Binding-protein-dependent transport system inner membrane component Tlie_0484 PF00005 ABC transporter Tlie_0484 PF00571 CBS domain Tlie_0485 PF00528 Binding-protein-dependent transport system inner membrane component Tlie_0486 PF00465 Iron-containing alcohol dehydrogenase Tlie_0487 PF01022 Bacterial regulatory protein, arsR family Tlie_0488 PF00403 Heavy-metal-associated domain Tlie_0489 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Tlie_0489 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Tlie_0491 PF16653 Saccharopine dehydrogenase C-terminal domain Tlie_0491 PF03435 Saccharopine dehydrogenase NADP binding domain Tlie_0492 PF03633 Glycosyl hydrolase family 65, C-terminal domain Tlie_0492 PF03632 Glycosyl hydrolase family 65 central catalytic domain Tlie_0492 PF03636 Glycosyl hydrolase family 65, N-terminal domain Tlie_0492 PF02358 Trehalose-phosphatase Tlie_0493 PF03632 Glycosyl hydrolase family 65 central catalytic domain Tlie_0493 PF03633 Glycosyl hydrolase family 65, C-terminal domain Tlie_0493 PF02358 Trehalose-phosphatase Tlie_0493 PF03636 Glycosyl hydrolase family 65, N-terminal domain Tlie_0494 PF00672 HAMP domain Tlie_0494 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tlie_0494 PF02743 Cache domain Tlie_0495 PF00196 Bacterial regulatory proteins, luxR family Tlie_0495 PF00072 Response regulator receiver domain Tlie_0496 PF00375 Sodium:dicarboxylate symporter family Tlie_0497 PF00872 Transposase, Mutator family Tlie_0498 PF08546 Ketopantoate reductase PanE/ApbA C terminal Tlie_0498 PF02558 Ketopantoate reductase PanE/ApbA Tlie_0500 PF00266 Aminotransferase class-V Tlie_0501 PF01594 AI-2E family transporter Tlie_0502 PF12848 ABC transporter Tlie_0502 PF16326 ABC transporter C-terminal domain Tlie_0502 PF00005 ABC transporter Tlie_0506 PF00883 Cytosol aminopeptidase family, catalytic domain Tlie_0506 PF02789 Cytosol aminopeptidase family, N-terminal domain Tlie_0507 PF10417 C-terminal domain of 1-Cys peroxiredoxin Tlie_0507 PF00578 AhpC/TSA family Tlie_0508 PF10417 C-terminal domain of 1-Cys peroxiredoxin Tlie_0508 PF00578 AhpC/TSA family Tlie_0510 PF01380 SIS domain Tlie_0510 PF01418 Helix-turn-helix domain, rpiR family Tlie_0511 PF02423 Ornithine cyclodeaminase/mu-crystallin family Tlie_0516 PF13380 CoA binding domain Tlie_0517 PF00266 Aminotransferase class-V Tlie_0518 PF01592 NifU-like N terminal domain Tlie_0524 PF10502 Signal peptidase, peptidase S26 Tlie_0525 PF01926 50S ribosome-binding GTPase Tlie_0526 PF01351 Ribonuclease HII Tlie_0527 PF02021 Uncharacterised protein family UPF0102 Tlie_0528 PF01078 Magnesium chelatase, subunit ChlI Tlie_0528 PF13335 Magnesium chelatase, subunit ChlI C-terminal Tlie_0529 PF02481 DNA recombination-mediator protein A Tlie_0529 PF17782 DprA winged helix domain Tlie_0531 PF01131 DNA topoisomerase Tlie_0531 PF01751 Toprim domain Tlie_0531 PF01396 Topoisomerase DNA binding C4 zinc finger Tlie_0532 PF01134 Glucose inhibited division protein A Tlie_0533 PF02899 Phage integrase, N-terminal SAM-like domain Tlie_0533 PF00589 Phage integrase family Tlie_0534 PF00227 Proteasome subunit Tlie_0535 PF00004 ATPase family associated with various cellular activities (AAA) Tlie_0535 PF07724 AAA domain (Cdc48 subfamily) Tlie_0535 PF10431 C-terminal, D2-small domain, of ClpB protein Tlie_0536 PF08222 CodY helix-turn-helix domain Tlie_0536 PF06018 CodY GAF-like domain Tlie_0537 PF03725 3' exoribonuclease family, domain 2 Tlie_0537 PF00575 S1 RNA binding domain Tlie_0537 PF01138 3' exoribonuclease family, domain 1 Tlie_0537 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Tlie_0537 PF00013 KH domain Tlie_0539 PF02541 Ppx/GppA phosphatase family Tlie_0540 PF14698 Argininosuccinate lyase C-terminal Tlie_0540 PF00206 Lyase Tlie_0542 PF00300 Histidine phosphatase superfamily (branch 1) Tlie_0543 PF04542 Sigma-70 region 2 Tlie_0543 PF04539 Sigma-70 region 3 Tlie_0543 PF04545 Sigma-70, region 4 Tlie_0545 PF01103 Surface antigen Tlie_0545 PF07244 Surface antigen variable number repeat Tlie_0547 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Tlie_0547 PF00132 Bacterial transferase hexapeptide (six repeats) Tlie_0548 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Tlie_0549 PF07977 FabA-like domain Tlie_0550 PF00132 Bacterial transferase hexapeptide (six repeats) Tlie_0550 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Tlie_0554 PF02684 Lipid-A-disaccharide synthetase Tlie_0556 PF00664 ABC transporter transmembrane region Tlie_0556 PF00005 ABC transporter Tlie_0557 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Tlie_0558 PF02348 Cytidylyltransferase Tlie_0559 PF00793 DAHP synthetase I family Tlie_0560 PF01380 SIS domain Tlie_0560 PF00571 CBS domain Tlie_0561 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Tlie_0562 PF00465 Iron-containing alcohol dehydrogenase Tlie_0563 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Tlie_0565 PF00534 Glycosyl transferases group 1 Tlie_0565 PF13439 Glycosyltransferase Family 4 Tlie_0569 PF00535 Glycosyl transferase family 2 Tlie_0570 PF00534 Glycosyl transferases group 1 Tlie_0575 PF00365 Phosphofructokinase Tlie_0579 PF00923 Transaldolase/Fructose-6-phosphate aldolase Tlie_0580 PF07498 Rho termination factor, N-terminal domain Tlie_0580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tlie_0580 PF07497 Rho termination factor, RNA-binding domain Tlie_0581 PF01551 Peptidase family M23 Tlie_0582 PF00117 Glutamine amidotransferase class-I Tlie_0582 PF06418 CTP synthase N-terminus Tlie_0587 PF01820 D-ala D-ala ligase N-terminus Tlie_0587 PF07478 D-ala D-ala ligase C-terminus Tlie_0588 PF01272 Transcription elongation factor, GreA/GreB, C-term Tlie_0588 PF03449 Transcription elongation factor, N-terminal Tlie_0589 PF00291 Pyridoxal-phosphate dependent enzyme Tlie_0590 PF08544 GHMP kinases C terminal Tlie_0590 PF00288 GHMP kinases N terminal domain Tlie_0591 PF01842 ACT domain Tlie_0591 PF13840 ACT domain Tlie_0591 PF00696 Amino acid kinase family Tlie_0592 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tlie_0592 PF02774 Semialdehyde dehydrogenase, dimerisation domain Tlie_0594 PF00005 ABC transporter Tlie_0595 PF01750 Hydrogenase maturation protease Tlie_0596 PF03023 Lipid II flippase MurJ Tlie_0599 PF00814 Glycoprotease family Tlie_0600 PF00166 Chaperonin 10 Kd subunit Tlie_0601 PF00118 TCP-1/cpn60 chaperonin family Tlie_0602 PF00958 GMP synthase C terminal domain Tlie_0602 PF00117 Glutamine amidotransferase class-I Tlie_0602 PF02540 NAD synthase Tlie_0603 PF01594 AI-2E family transporter Tlie_0604 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Tlie_0605 PF03030 Inorganic H+ pyrophosphatase Tlie_0606 PF01807 CHC2 zinc finger Tlie_0606 PF08275 DNA primase catalytic core, N-terminal domain Tlie_0606 PF10410 DnaB-helicase binding domain of primase Tlie_0607 PF04542 Sigma-70 region 2 Tlie_0607 PF00140 Sigma-70 factor, region 1.2 Tlie_0607 PF04539 Sigma-70 region 3 Tlie_0607 PF04545 Sigma-70, region 4 Tlie_0607 PF03979 Sigma-70 factor, region 1.1 Tlie_0608 PF01479 S4 domain Tlie_0610 PF02629 CoA binding domain Tlie_0610 PF06971 Putative DNA-binding protein N-terminus Tlie_0611 PF02699 Preprotein translocase subunit Tlie_0612 PF07549 SecD/SecF GG Motif Tlie_0612 PF02355 Protein export membrane protein Tlie_0613 PF02355 Protein export membrane protein Tlie_0613 PF07549 SecD/SecF GG Motif Tlie_0616 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Tlie_0616 PF17768 RecJ OB domain Tlie_0616 PF02272 DHHA1 domain Tlie_0616 PF01368 DHH family Tlie_0617 PF02824 TGS domain Tlie_0617 PF13291 ACT domain Tlie_0617 PF04607 Region found in RelA / SpoT proteins Tlie_0618 PF02580 D-Tyr-tRNA(Tyr) deacylase Tlie_0619 PF00753 Metallo-beta-lactamase superfamily Tlie_0623 PF00905 Penicillin binding protein transpeptidase domain Tlie_0623 PF03717 Penicillin-binding Protein dimerisation domain Tlie_0624 PF03775 Septum formation inhibitor MinC, C-terminal domain Tlie_0625 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tlie_0626 PF03776 Septum formation topological specificity factor MinE Tlie_0627 PF01098 Cell cycle protein Tlie_0630 PF10150 Ribonuclease E/G family Tlie_0631 PF06470 SMC proteins Flexible Hinge Domain Tlie_0631 PF02463 RecF/RecN/SMC N terminal domain Tlie_0633 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tlie_0634 PF01588 Putative tRNA binding domain Tlie_0634 PF08264 Anticodon-binding domain of tRNA Tlie_0634 PF09334 tRNA synthetases class I (M) Tlie_0635 PF01026 TatD related DNase Tlie_0636 PF01702 Queuine tRNA-ribosyltransferase Tlie_0637 PF03481 Putative GTP-binding controlling metal-binding Tlie_0637 PF01300 Telomere recombination Tlie_0638 PF04561 RNA polymerase Rpb2, domain 2 Tlie_0638 PF04565 RNA polymerase Rpb2, domain 3 Tlie_0638 PF10385 RNA polymerase beta subunit external 1 domain Tlie_0638 PF00562 RNA polymerase Rpb2, domain 6 Tlie_0638 PF04560 RNA polymerase Rpb2, domain 7 Tlie_0638 PF04563 RNA polymerase beta subunit Tlie_0639 PF04997 RNA polymerase Rpb1, domain 1 Tlie_0639 PF04998 RNA polymerase Rpb1, domain 5 Tlie_0639 PF05000 RNA polymerase Rpb1, domain 4 Tlie_0639 PF04983 RNA polymerase Rpb1, domain 3 Tlie_0639 PF00623 RNA polymerase Rpb1, domain 2 Tlie_0640 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Tlie_0641 PF00164 Ribosomal protein S12/S23 Tlie_0642 PF00177 Ribosomal protein S7p/S5e Tlie_0643 PF14492 Elongation Factor G, domain II Tlie_0643 PF03764 Elongation factor G, domain IV Tlie_0643 PF00009 Elongation factor Tu GTP binding domain Tlie_0643 PF03144 Elongation factor Tu domain 2 Tlie_0643 PF00679 Elongation factor G C-terminus Tlie_0644 PF03143 Elongation factor Tu C-terminal domain Tlie_0644 PF03144 Elongation factor Tu domain 2 Tlie_0644 PF00009 Elongation factor Tu GTP binding domain Tlie_0645 PF00338 Ribosomal protein S10p/S20e Tlie_0646 PF00297 Ribosomal protein L3 Tlie_0647 PF00573 Ribosomal protein L4/L1 family Tlie_0648 PF00276 Ribosomal protein L23 Tlie_0649 PF00181 Ribosomal Proteins L2, RNA binding domain Tlie_0649 PF03947 Ribosomal Proteins L2, C-terminal domain Tlie_0650 PF00203 Ribosomal protein S19 Tlie_0651 PF00237 Ribosomal protein L22p/L17e Tlie_0652 PF00189 Ribosomal protein S3, C-terminal domain Tlie_0652 PF07650 KH domain Tlie_0653 PF00252 Ribosomal protein L16p/L10e Tlie_0654 PF00831 Ribosomal L29 protein Tlie_0655 PF00366 Ribosomal protein S17 Tlie_0656 PF00238 Ribosomal protein L14p/L23e Tlie_0657 PF00467 KOW motif Tlie_0657 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Tlie_0658 PF00673 ribosomal L5P family C-terminus Tlie_0658 PF00281 Ribosomal protein L5 Tlie_0659 PF00253 Ribosomal protein S14p/S29e Tlie_0660 PF00410 Ribosomal protein S8 Tlie_0661 PF00347 Ribosomal protein L6 Tlie_0662 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Tlie_0663 PF03719 Ribosomal protein S5, C-terminal domain Tlie_0663 PF00333 Ribosomal protein S5, N-terminal domain Tlie_0664 PF00327 Ribosomal protein L30p/L7e Tlie_0665 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Tlie_0666 PF00344 SecY translocase Tlie_0667 PF05191 Adenylate kinase, active site lid Tlie_0668 PF00557 Metallopeptidase family M24 Tlie_0670 PF01176 Translation initiation factor 1A / IF-1 Tlie_0671 PF00444 Ribosomal protein L36 Tlie_0672 PF00416 Ribosomal protein S13/S18 Tlie_0673 PF00411 Ribosomal protein S11 Tlie_0674 PF00163 Ribosomal protein S4/S9 N-terminal domain Tlie_0674 PF01479 S4 domain Tlie_0675 PF01000 RNA polymerase Rpb3/RpoA insert domain Tlie_0675 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Tlie_0675 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Tlie_0676 PF01196 Ribosomal protein L17 Tlie_0677 PF00005 ABC transporter Tlie_0678 PF00005 ABC transporter Tlie_0679 PF02361 Cobalt transport protein Tlie_0680 PF01416 tRNA pseudouridine synthase Tlie_0683 PF00202 Aminotransferase class-III Tlie_0684 PF11283 Protein of unknown function (DUF3084) Tlie_0686 PF00583 Acetyltransferase (GNAT) family Tlie_0687 PF00438 S-adenosylmethionine synthetase, N-terminal domain Tlie_0687 PF02773 S-adenosylmethionine synthetase, C-terminal domain Tlie_0687 PF02772 S-adenosylmethionine synthetase, central domain Tlie_0688 PF00156 Phosphoribosyl transferase domain Tlie_0691 PF00005 ABC transporter Tlie_0692 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tlie_0692 PF00005 ABC transporter Tlie_0693 PF02653 Branched-chain amino acid transport system / permease component Tlie_0693 PF11862 Domain of unknown function (DUF3382) Tlie_0694 PF02653 Branched-chain amino acid transport system / permease component Tlie_0695 PF13458 Periplasmic binding protein Tlie_0699 PF18073 Rubredoxin metal binding domain Tlie_0700 PF01957 NfeD-like C-terminal, partner-binding Tlie_0700 PF01972 Serine dehydrogenase proteinase Tlie_0701 PF01145 SPFH domain / Band 7 family Tlie_0701 PF16200 C-terminal region of band_7 Tlie_0702 PF00133 tRNA synthetases class I (I, L, M and V) Tlie_0702 PF08264 Anticodon-binding domain of tRNA Tlie_0702 PF13603 Leucyl-tRNA synthetase, Domain 2 Tlie_0704 PF01649 Ribosomal protein S20 Tlie_0705 PF13367 PrsW family intramembrane metalloprotease Tlie_0706 PF13307 Helicase C-terminal domain Tlie_0706 PF06733 DEAD_2 Tlie_0709 PF00468 Ribosomal protein L34 Tlie_0710 PF00825 Ribonuclease P Tlie_0711 PF01809 Putative membrane protein insertion efficiency factor Tlie_0712 PF14849 YidC periplasmic domain Tlie_0712 PF02096 60Kd inner membrane protein Tlie_0715 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase Tlie_0716 PF13180 PDZ domain Tlie_0719 PF00872 Transposase, Mutator family Tlie_0721 PF00486 Transcriptional regulatory protein, C terminal Tlie_0721 PF00072 Response regulator receiver domain Tlie_0722 PF00312 Ribosomal protein S15 Tlie_0723 PF00013 KH domain Tlie_0723 PF03725 3' exoribonuclease family, domain 2 Tlie_0723 PF01138 3' exoribonuclease family, domain 1 Tlie_0723 PF00575 S1 RNA binding domain Tlie_0723 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Tlie_0724 PF00692 dUTPase Tlie_0726 PF00209 Sodium:neurotransmitter symporter family Tlie_0728 PF00707 Translation initiation factor IF-3, C-terminal domain Tlie_0728 PF05198 Translation initiation factor IF-3, N-terminal domain Tlie_0729 PF01632 Ribosomal protein L35 Tlie_0730 PF00453 Ribosomal protein L20 Tlie_0731 PF02386 Cation transport protein Tlie_0732 PF02080 TrkA-C domain Tlie_0732 PF02254 TrkA-N domain Tlie_0733 PF01409 tRNA synthetases class II core domain (F) Tlie_0733 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Tlie_0734 PF03147 Ferredoxin-fold anticodon binding domain Tlie_0734 PF03484 tRNA synthetase B5 domain Tlie_0734 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Tlie_0734 PF03483 B3/4 domain Tlie_0734 PF01588 Putative tRNA binding domain Tlie_0738 PF01713 Smr domain Tlie_0738 PF00488 MutS domain V Tlie_0740 PF00313 'Cold-shock' DNA-binding domain Tlie_0741 PF16868 NMT1-like family Tlie_0743 PF01197 Ribosomal protein L31 Tlie_0744 PF02511 Thymidylate synthase complementing protein Tlie_0745 PF07136 Protein of unknown function (DUF1385) Tlie_0746 PF00472 RF-1 domain Tlie_0746 PF03462 PCRF domain Tlie_0747 PF17827 PrmC N-terminal domain Tlie_0747 PF05175 Methyltransferase small domain Tlie_0748 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tlie_0749 PF00294 pfkB family carbohydrate kinase Tlie_0750 PF01451 Low molecular weight phosphotyrosine protein phosphatase Tlie_0751 PF01435 Peptidase family M48 Tlie_0752 PF12169 DNA polymerase III subunits gamma and tau domain III Tlie_0753 PF07733 Bacterial DNA polymerase III alpha NTPase domain Tlie_0753 PF14579 Helix-hairpin-helix motif Tlie_0753 PF02811 PHP domain Tlie_0753 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Tlie_0754 PF02081 Tryptophan RNA-binding attenuator protein Tlie_0755 PF02887 Pyruvate kinase, alpha/beta domain Tlie_0755 PF00224 Pyruvate kinase, barrel domain Tlie_0755 PF00391 PEP-utilising enzyme, mobile domain Tlie_0756 PF00293 NUDIX domain Tlie_0757 PF01261 Xylose isomerase-like TIM barrel Tlie_0758 PF01168 Alanine racemase, N-terminal domain Tlie_0759 PF02457 DisA bacterial checkpoint controller nucleotide-binding Tlie_0761 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tlie_0761 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tlie_0761 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tlie_0761 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tlie_0762 PF00483 Nucleotidyl transferase Tlie_0763 PF01380 SIS domain Tlie_0767 PF12804 MobA-like NTP transferase domain Tlie_0767 PF00132 Bacterial transferase hexapeptide (six repeats) Tlie_0768 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Tlie_0768 PF14572 Phosphoribosyl synthetase-associated domain Tlie_0769 PF01386 Ribosomal L25p family Tlie_0769 PF14693 Ribosomal protein TL5, C-terminal domain Tlie_0770 PF01195 Peptidyl-tRNA hydrolase Tlie_0771 PF00270 DEAD/DEAH box helicase Tlie_0771 PF02559 CarD-like/TRCF domain Tlie_0771 PF03461 TRCF domain Tlie_0771 PF17757 UvrB interaction domain Tlie_0771 PF00271 Helicase conserved C-terminal domain Tlie_0772 PF03819 MazG nucleotide pyrophosphohydrolase domain Tlie_0773 PF00682 HMGL-like Tlie_0773 PF02436 Conserved carboxylase domain Tlie_0773 PF00364 Biotin-requiring enzyme Tlie_0774 PF01106 NifU-like domain Tlie_0775 PF02562 PhoH-like protein Tlie_0776 PF01966 HD domain Tlie_0776 PF07697 7TM-HD extracellular Tlie_0776 PF07698 7TM receptor with intracellular HD hydrolase Tlie_0777 PF02130 Uncharacterized protein family UPF0054 Tlie_0778 PF01595 Cyclin M transmembrane N-terminal domain Tlie_0778 PF03471 Transporter associated domain Tlie_0778 PF00571 CBS domain Tlie_0779 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Tlie_0780 PF07650 KH domain Tlie_0780 PF01926 50S ribosome-binding GTPase Tlie_0782 PF02091 Glycyl-tRNA synthetase alpha subunit Tlie_0783 PF02092 Glycyl-tRNA synthetase beta subunit Tlie_0784 PF03618 Kinase/pyrophosphorylase Tlie_0785 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Tlie_0785 PF02896 PEP-utilising enzyme, TIM barrel domain Tlie_0785 PF00391 PEP-utilising enzyme, mobile domain Tlie_0786 PF13286 Phosphohydrolase-associated domain Tlie_0786 PF01966 HD domain Tlie_0787 PF00905 Penicillin binding protein transpeptidase domain Tlie_0787 PF17092 Penicillin-binding protein OB-like domain Tlie_0787 PF00912 Transglycosylase Tlie_0789 PF02146 Sir2 family Tlie_0790 PF00860 Permease family Tlie_0791 PF00301 Rubredoxin Tlie_0791 PF01613 Flavin reductase like domain Tlie_0794 PF02659 Putative manganese efflux pump Tlie_0796 PF17866 AAA lid domain Tlie_0796 PF00004 ATPase family associated with various cellular activities (AAA) Tlie_0798 PF00072 Response regulator receiver domain Tlie_0800 PF03576 Peptidase family S58 Tlie_0801 PF00196 Bacterial regulatory proteins, luxR family Tlie_0801 PF00072 Response regulator receiver domain Tlie_0802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tlie_0802 PF07730 Histidine kinase Tlie_0803 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Tlie_0804 PF10996 Beta-Casp domain Tlie_0804 PF00753 Metallo-beta-lactamase superfamily Tlie_0804 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Tlie_0806 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Tlie_0806 PF00529 HlyD membrane-fusion protein of T1SS Tlie_0807 PF00873 AcrB/AcrD/AcrF family Tlie_0809 PF00579 tRNA synthetases class I (W and Y) Tlie_0810 PF03279 Bacterial lipid A biosynthesis acyltransferase Tlie_0811 PF01361 Tautomerase enzyme Tlie_0812 PF01926 50S ribosome-binding GTPase Tlie_0812 PF12631 MnmE helical domain Tlie_0812 PF10396 GTP-binding protein TrmE N-terminus Tlie_0813 PF00155 Aminotransferase class I and II Tlie_0814 PF01435 Peptidase family M48 Tlie_0815 PF00266 Aminotransferase class-V Tlie_0816 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tlie_0816 PF01842 ACT domain Tlie_0816 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tlie_0818 PF01676 Metalloenzyme superfamily Tlie_0818 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Tlie_0819 PF01966 HD domain Tlie_0819 PF01336 OB-fold nucleic acid binding domain Tlie_0820 PF01479 S4 domain Tlie_0820 PF00849 RNA pseudouridylate synthase Tlie_0822 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Tlie_0822 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tlie_0823 PF07687 Peptidase dimerisation domain Tlie_0823 PF01546 Peptidase family M20/M25/M40 Tlie_0824 PF13193 AMP-binding enzyme C-terminal domain Tlie_0824 PF00501 AMP-binding enzyme Tlie_0825 PF01467 Cytidylyltransferase-like Tlie_0825 PF00294 pfkB family carbohydrate kinase Tlie_0826 PF00583 Acetyltransferase (GNAT) family Tlie_0826 PF08218 Citrate lyase ligase C-terminal domain Tlie_0827 PF13472 GDSL-like Lipase/Acylhydrolase family Tlie_0829 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Tlie_0829 PF01502 Phosphoribosyl-AMP cyclohydrolase Tlie_0830 PF00977 Histidine biosynthesis protein Tlie_0832 PF00117 Glutamine amidotransferase class-I Tlie_0833 PF00475 Imidazoleglycerol-phosphate dehydratase Tlie_0834 PF01634 ATP phosphoribosyltransferase Tlie_0836 PF00815 Histidinol dehydrogenase Tlie_0837 PF00155 Aminotransferase class I and II Tlie_0838 PF00392 Bacterial regulatory proteins, gntR family Tlie_0838 PF00155 Aminotransferase class I and II Tlie_0841 PF07729 FCD domain Tlie_0841 PF00392 Bacterial regulatory proteins, gntR family Tlie_0842 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Tlie_0845 PF01029 NusB family Tlie_0845 PF01189 16S rRNA methyltransferase RsmB/F Tlie_0846 PF03793 PASTA domain Tlie_0846 PF00069 Protein kinase domain Tlie_0847 PF00834 Ribulose-phosphate 3 epimerase family Tlie_0848 PF13464 Domain of unknown function (DUF4115) Tlie_0849 PF00919 Uncharacterized protein family UPF0004 Tlie_0849 PF18693 TRAM domain Tlie_0849 PF04055 Radical SAM superfamily Tlie_0850 PF04608 Phosphatidylglycerophosphatase A Tlie_0851 PF18146 Damage-inducible protein CinA KH domain Tlie_0851 PF00994 Probable molybdopterin binding domain Tlie_0851 PF02464 Competence-damaged protein Tlie_0852 PF02834 LigT like Phosphoesterase Tlie_0853 PF00154 recA bacterial DNA recombination protein Tlie_0855 PF00437 Type II/IV secretion system protein Tlie_0856 PF00482 Type II secretion system (T2SS), protein F Tlie_0857 PF08334 Type II secretion system (T2SS), protein G Tlie_0857 PF07963 Prokaryotic N-terminal methylation motif Tlie_0862 PF00263 Bacterial type II and III secretion system protein Tlie_0862 PF07660 Secretin and TonB N terminus short domain Tlie_0862 PF03958 Bacterial type II/III secretion system short domain Tlie_0862 PF11741 AMIN domain Tlie_0863 PF09285 Elongation factor P, C-terminal Tlie_0863 PF08207 Elongation factor P (EF-P) KOW-like domain Tlie_0863 PF01132 Elongation factor P (EF-P) OB domain Tlie_0867 PF01029 NusB family Tlie_0868 PF13742 OB-fold nucleic acid binding domain Tlie_0868 PF02601 Exonuclease VII, large subunit Tlie_0869 PF01008 Initiation factor 2 subunit family Tlie_0870 PF05221 S-adenosyl-L-homocysteine hydrolase Tlie_0870 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Tlie_0871 PF01979 Amidohydrolase family Tlie_0872 PF01411 tRNA synthetases class II (A) Tlie_0872 PF02272 DHHA1 domain Tlie_0872 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tlie_0873 PF03652 Holliday junction resolvase Tlie_0874 PF01624 MutS domain I Tlie_0874 PF05188 MutS domain II Tlie_0874 PF05192 MutS domain III Tlie_0874 PF05190 MutS family domain IV Tlie_0874 PF00488 MutS domain V Tlie_0875 PF08676 MutL C terminal dimerisation domain Tlie_0875 PF01119 DNA mismatch repair protein, C-terminal domain Tlie_0877 PF02401 LytB protein Tlie_0878 PF00575 S1 RNA binding domain Tlie_0879 PF01327 Polypeptide deformylase Tlie_0880 PF02911 Formyl transferase, C-terminal domain Tlie_0880 PF00551 Formyl transferase Tlie_0886 PF00293 NUDIX domain Tlie_0887 PF00589 Phage integrase family Tlie_0887 PF02899 Phage integrase, N-terminal SAM-like domain Tlie_0888 PF01048 Phosphorylase superfamily Tlie_0889 PF00591 Glycosyl transferase family, a/b domain Tlie_0889 PF02885 Glycosyl transferase family, helical bundle domain Tlie_0889 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Tlie_0890 PF04545 Sigma-70, region 4 Tlie_0890 PF04542 Sigma-70 region 2 Tlie_0892 PF02608 ABC transporter substrate-binding protein PnrA-like Tlie_0896 PF00156 Phosphoribosyl transferase domain Tlie_0897 PF01406 tRNA synthetases class I (C) catalytic domain Tlie_0897 PF09190 DALR domain Tlie_0898 PF08459 UvrC Helix-hairpin-helix N-terminal Tlie_0898 PF01541 GIY-YIG catalytic domain Tlie_0898 PF02151 UvrB/uvrC motif Tlie_0899 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Tlie_0899 PF01872 RibD C-terminal domain Tlie_0900 PF00677 Lumazine binding domain Tlie_0901 PF00925 GTP cyclohydrolase II Tlie_0901 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Tlie_0902 PF00885 6,7-dimethyl-8-ribityllumazine synthase Tlie_0903 PF02403 Seryl-tRNA synthetase N-terminal domain Tlie_0903 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tlie_0904 PF03808 Glycosyl transferase WecB/TagA/CpsF family Tlie_0905 PF00571 CBS domain Tlie_0907 PF01496 V-type ATPase 116kDa subunit family Tlie_0912 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tlie_0912 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tlie_0912 PF16886 ATPsynthase alpha/beta subunit N-term extension Tlie_0913 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tlie_0913 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tlie_0915 PF02590 Predicted SPOUT methyltransferase Tlie_0916 PF02575 YbaB/EbfC DNA-binding family Tlie_0919 PF02542 YgbB family Tlie_0919 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tlie_0920 PF00478 IMP dehydrogenase / GMP reductase domain Tlie_0920 PF00571 CBS domain Tlie_0921 PF02576 RimP N-terminal domain Tlie_0921 PF17384 RimP C-terminal SH3 domain Tlie_0922 PF00575 S1 RNA binding domain Tlie_0922 PF13184 NusA-like KH domain Tlie_0922 PF08529 NusA N-terminal domain Tlie_0923 PF04296 Protein of unknown function (DUF448) Tlie_0924 PF11987 Translation-initiation factor 2 Tlie_0924 PF00009 Elongation factor Tu GTP binding domain Tlie_0924 PF04760 Translation initiation factor IF-2, N-terminal region Tlie_0926 PF02033 Ribosome-binding factor A Tlie_0927 PF02272 DHHA1 domain Tlie_0927 PF01368 DHH family Tlie_0928 PF01509 TruB family pseudouridylate synthase (N terminal domain) Tlie_0928 PF16198 tRNA pseudouridylate synthase B C-terminal domain Tlie_0929 PF06574 FAD synthetase Tlie_0929 PF01687 Riboflavin kinase Tlie_0933 PF08264 Anticodon-binding domain of tRNA Tlie_0933 PF06827 Zinc finger found in FPG and IleRS Tlie_0933 PF00133 tRNA synthetases class I (I, L, M and V) Tlie_0935 PF00849 RNA pseudouridylate synthase Tlie_0935 PF01479 S4 domain Tlie_0940 PF11734 TilS substrate C-terminal domain Tlie_0940 PF01171 PP-loop family Tlie_0942 PF00004 ATPase family associated with various cellular activities (AAA) Tlie_0942 PF17862 AAA+ lid domain Tlie_0942 PF01434 Peptidase family M41 Tlie_0942 PF06480 FtsH Extracellular Tlie_0943 PF02151 UvrB/uvrC motif Tlie_0943 PF12344 Ultra-violet resistance protein B Tlie_0943 PF17757 UvrB interaction domain Tlie_0943 PF04851 Type III restriction enzyme, res subunit Tlie_0943 PF00271 Helicase conserved C-terminal domain Tlie_0944 PF17760 UvrA interaction domain Tlie_0944 PF17755 UvrA DNA-binding domain Tlie_0945 PF08032 RNA 2'-O ribose methyltransferase substrate binding Tlie_0945 PF00588 SpoU rRNA Methylase family Tlie_0946 PF01648 4'-phosphopantetheinyl transferase superfamily Tlie_0947 PF01256 Carbohydrate kinase Tlie_0947 PF03853 YjeF-related protein N-terminus Tlie_0948 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Tlie_0949 PF00814 Glycoprotease family Tlie_0951 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tlie_0951 PF04324 BFD-like [2Fe-2S] binding domain Tlie_0953 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tlie_0953 PF04324 BFD-like [2Fe-2S] binding domain Tlie_0954 PF01266 FAD dependent oxidoreductase Tlie_0954 PF08669 Glycine cleavage T-protein C-terminal barrel domain Tlie_0954 PF01571 Aminomethyltransferase folate-binding domain Tlie_0954 PF16350 FAD dependent oxidoreductase central domain Tlie_0956 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Tlie_0956 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Tlie_0956 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Tlie_0957 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tlie_0959 PF05958 tRNA (Uracil-5-)-methyltransferase Tlie_0959 PF01938 TRAM domain Tlie_0961 PF01496 V-type ATPase 116kDa subunit family Tlie_0962 PF00137 ATP synthase subunit C Tlie_0963 PF01991 ATP synthase (E/31 kDa) subunit Tlie_0964 PF01992 ATP synthase (C/AC39) subunit Tlie_0966 PF16886 ATPsynthase alpha/beta subunit N-term extension Tlie_0966 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tlie_0966 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tlie_0967 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tlie_0967 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tlie_0968 PF01813 ATP synthase subunit D Tlie_0969 PF02381 MraZ protein, putative antitoxin-like Tlie_0970 PF01795 MraW methylase family Tlie_0972 PF00905 Penicillin binding protein transpeptidase domain Tlie_0972 PF03717 Penicillin-binding Protein dimerisation domain Tlie_0972 PF03793 PASTA domain Tlie_0973 PF02875 Mur ligase family, glutamate ligase domain Tlie_0973 PF08245 Mur ligase middle domain Tlie_0973 PF01225 Mur ligase family, catalytic domain Tlie_0974 PF01225 Mur ligase family, catalytic domain Tlie_0974 PF02875 Mur ligase family, glutamate ligase domain Tlie_0974 PF08245 Mur ligase middle domain Tlie_0975 PF00953 Glycosyl transferase family 4 Tlie_0976 PF02875 Mur ligase family, glutamate ligase domain Tlie_0976 PF08245 Mur ligase middle domain Tlie_0977 PF01098 Cell cycle protein Tlie_0979 PF02875 Mur ligase family, glutamate ligase domain Tlie_0979 PF01225 Mur ligase family, catalytic domain Tlie_0979 PF08245 Mur ligase middle domain Tlie_0980 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Tlie_0980 PF01565 FAD binding domain Tlie_0982 PF02491 SHS2 domain inserted in FTSA Tlie_0983 PF12327 FtsZ family, C-terminal domain Tlie_0983 PF00091 Tubulin/FtsZ family, GTPase domain Tlie_0984 PF04055 Radical SAM superfamily Tlie_0984 PF01938 TRAM domain Tlie_0984 PF00919 Uncharacterized protein family UPF0004 Tlie_0986 PF00994 Probable molybdopterin binding domain Tlie_0986 PF03454 MoeA C-terminal region (domain IV) Tlie_0986 PF03453 MoeA N-terminal region (domain I and II) Tlie_0987 PF12727 PBP superfamily domain Tlie_0987 PF12728 Helix-turn-helix domain Tlie_0988 PF04055 Radical SAM superfamily Tlie_0988 PF06463 Molybdenum Cofactor Synthesis C Tlie_0989 PF01967 MoaC family Tlie_0990 PF01967 MoaC family Tlie_0990 PF00994 Probable molybdopterin binding domain Tlie_0991 PF03668 P-loop ATPase protein family Tlie_0992 PF01933 Uncharacterised protein family UPF0052 Tlie_0993 PF02650 WhiA C-terminal HTH domain Tlie_0993 PF14527 WhiA LAGLIDADG-like domain Tlie_0993 PF10298 WhiA N-terminal LAGLIDADG-like domain Tlie_0995 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Tlie_0995 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Tlie_0996 PF00162 Phosphoglycerate kinase Tlie_0997 PF00121 Triosephosphate isomerase Tlie_0998 PF17763 Glutaminase/Asparaginase C-terminal domain Tlie_0998 PF00710 Asparaginase, N-terminal Tlie_1000 PF03816 Cell envelope-related transcriptional attenuator domain Tlie_1001 PF01467 Cytidylyltransferase-like Tlie_1002 PF01018 GTP1/OBG Tlie_1002 PF09269 Domain of unknown function (DUF1967) Tlie_1002 PF01926 50S ribosome-binding GTPase Tlie_1003 PF01016 Ribosomal L27 protein Tlie_1005 PF00829 Ribosomal prokaryotic L21 protein Tlie_1007 PF02463 RecF/RecN/SMC N terminal domain Tlie_1008 PF01513 ATP-NAD kinase Tlie_1009 PF01728 FtsJ-like methyltransferase Tlie_1009 PF01479 S4 domain Tlie_1010 PF02780 Transketolase, C-terminal domain Tlie_1010 PF02779 Transketolase, pyrimidine binding domain Tlie_1010 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Tlie_1011 PF00348 Polyprenyl synthetase Tlie_1012 PF02609 Exonuclease VII small subunit Tlie_1013 PF00830 Ribosomal L28 family Tlie_1015 PF09397 Ftsk gamma domain Tlie_1015 PF17854 FtsK alpha domain Tlie_1015 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Tlie_1015 PF01580 FtsK/SpoIIIE family Tlie_1016 PF01523 Putative modulator of DNA gyrase Tlie_1017 PF02618 YceG-like family Tlie_1018 PF13458 Periplasmic binding protein Tlie_1019 PF00005 ABC transporter Tlie_1020 PF00005 ABC transporter Tlie_1020 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tlie_1022 PF02653 Branched-chain amino acid transport system / permease component Tlie_1023 PF00221 Aromatic amino acid lyase Tlie_1025 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Tlie_1025 PF01871 AMMECR1 Tlie_1026 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Tlie_1026 PF01871 AMMECR1 Tlie_1028 PF02547 Queuosine biosynthesis protein Tlie_1029 PF04122 Putative cell wall binding repeat 2 Tlie_1029 PF08486 Stage II sporulation protein Tlie_1030 PF11146 Protein of unknown function (DUF2905) Tlie_1031 PF05496 Holliday junction DNA helicase RuvB P-loop domain Tlie_1031 PF05491 RuvB C-terminal winged helix domain Tlie_1031 PF17864 RuvB AAA lid domain Tlie_1032 PF07499 RuvA, C-terminal domain Tlie_1032 PF01330 RuvA N terminal domain Tlie_1033 PF02075 Crossover junction endodeoxyribonuclease RuvC Tlie_1034 PF01709 Transcriptional regulator Tlie_1035 PF02540 NAD synthase Tlie_1036 PF00872 Transposase, Mutator family Tlie_1039 PF08753 NikR C terminal nickel binding domain Tlie_1039 PF01402 Ribbon-helix-helix protein, copG family Tlie_1041 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tlie_1041 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tlie_1043 PF02675 S-adenosylmethionine decarboxylase Tlie_1044 PF00491 Arginase family Tlie_1047 PF04551 GcpE protein Tlie_1048 PF17820 PDZ domain Tlie_1048 PF02163 Peptidase family M50 Tlie_1049 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Tlie_1049 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Tlie_1049 PF13288 DXP reductoisomerase C-terminal domain Tlie_1051 PF01255 Putative undecaprenyl diphosphate synthase Tlie_1052 PF03167 Uracil DNA glycosylase superfamily Tlie_1054 PF00155 Aminotransferase class I and II Tlie_1055 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tlie_1056 PF02350 UDP-N-acetylglucosamine 2-epimerase Tlie_1057 PF00953 Glycosyl transferase family 4 Tlie_1061 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Tlie_1061 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tlie_1063 PF08245 Mur ligase middle domain Tlie_1063 PF02875 Mur ligase family, glutamate ligase domain Tlie_1064 PF08264 Anticodon-binding domain of tRNA Tlie_1064 PF00133 tRNA synthetases class I (I, L, M and V) Tlie_1064 PF10458 Valyl tRNA synthetase tRNA binding arm Tlie_1065 PF01926 50S ribosome-binding GTPase Tlie_1066 PF00004 ATPase family associated with various cellular activities (AAA) Tlie_1066 PF05362 Lon protease (S16) C-terminal proteolytic domain Tlie_1066 PF02190 ATP-dependent protease La (LON) substrate-binding domain Tlie_1067 PF10431 C-terminal, D2-small domain, of ClpB protein Tlie_1067 PF06689 ClpX C4-type zinc finger Tlie_1067 PF07724 AAA domain (Cdc48 subfamily) Tlie_1068 PF00574 Clp protease Tlie_1069 PF05698 Bacterial trigger factor protein (TF) C-terminus Tlie_1069 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Tlie_1069 PF05697 Bacterial trigger factor protein (TF) Tlie_1070 PF01371 Trp repressor protein Tlie_1072 PF00633 Helix-hairpin-helix motif Tlie_1072 PF00730 HhH-GPD superfamily base excision DNA repair protein Tlie_1072 PF10576 Iron-sulfur binding domain of endonuclease III Tlie_1073 PF05362 Lon protease (S16) C-terminal proteolytic domain Tlie_1073 PF13654 AAA domain Tlie_1075 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Tlie_1075 PF12557 Cob(I)alamin adenosyltransferase N terminal Tlie_1076 PF07503 HypF finger Tlie_1076 PF00708 Acylphosphatase Tlie_1076 PF17788 HypF Kae1-like domain Tlie_1076 PF01300 Telomere recombination Tlie_1077 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Tlie_1078 PF10397 Adenylosuccinate lyase C-terminus Tlie_1078 PF00206 Lyase Tlie_1080 PF00448 SRP54-type protein, GTPase domain Tlie_1080 PF02881 SRP54-type protein, helical bundle domain Tlie_1081 PF04468 PSP1 C-terminal conserved region Tlie_1083 PF02223 Thymidylate kinase Tlie_1085 PF00005 ABC transporter Tlie_1085 PF08402 TOBE domain Tlie_1086 PF02405 Permease MlaE Tlie_1089 PF08279 HTH domain Tlie_1089 PF03099 Biotin/lipoate A/B protein ligase family Tlie_1089 PF02237 Biotin protein ligase C terminal domain Tlie_1092 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Tlie_1093 PF01180 Dihydroorotate dehydrogenase Tlie_1094 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Tlie_1095 PF01979 Amidohydrolase family Tlie_1096 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tlie_1096 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tlie_1097 PF00156 Phosphoribosyl transferase domain Tlie_1098 PF00035 Double-stranded RNA binding motif Tlie_1098 PF14622 Ribonuclease-III-like Tlie_1099 PF00109 Beta-ketoacyl synthase, N-terminal domain Tlie_1099 PF02801 Beta-ketoacyl synthase, C-terminal domain Tlie_1100 PF00550 Phosphopantetheine attachment site Tlie_1102 PF00698 Acyl transferase domain Tlie_1103 PF03060 Nitronate monooxygenase Tlie_1104 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Tlie_1104 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Tlie_1105 PF02504 Fatty acid synthesis protein Tlie_1107 PF01783 Ribosomal L32p protein family Tlie_1109 PF00871 Acetokinase family Tlie_1110 PF05636 HIGH Nucleotidyl Transferase Tlie_1111 PF01467 Cytidylyltransferase-like Tlie_1113 PF02390 Putative methyltransferase Tlie_1114 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Tlie_1116 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Tlie_1116 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Tlie_1117 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tlie_1118 PF00398 Ribosomal RNA adenine dimethylase Tlie_1119 PF00216 Bacterial DNA-binding protein Tlie_1120 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Tlie_1120 PF01926 50S ribosome-binding GTPase Tlie_1121 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Tlie_1121 PF17764 3′ DNA-binding domain (3′BD) Tlie_1121 PF18074 Primosomal protein N C-terminal domain Tlie_1121 PF00270 DEAD/DEAH box helicase Tlie_1122 PF02441 Flavoprotein Tlie_1122 PF04127 DNA / pantothenate metabolism flavoprotein Tlie_1124 PF00625 Guanylate kinase Tlie_1125 PF04025 Domain of unknown function (DUF370) Tlie_1126 PF03755 YicC-like family, N-terminal region Tlie_1126 PF08340 Domain of unknown function (DUF1732) Tlie_1127 PF01553 Acyltransferase Tlie_1128 PF02224 Cytidylate kinase Tlie_1129 PF01479 S4 domain Tlie_1129 PF00849 RNA pseudouridylate synthase Tlie_1130 PF04079 Segregation and condensation complex subunit ScpB Tlie_1132 PF00579 tRNA synthetases class I (W and Y) Tlie_1133 PF01784 NIF3 (NGG1p interacting factor 3) Tlie_1135 PF00156 Phosphoribosyl transferase domain Tlie_1135 PF09182 Bacterial purine repressor, N-terminal Tlie_1136 PF00288 GHMP kinases N terminal domain Tlie_1136 PF08544 GHMP kinases C terminal Tlie_1138 PF03144 Elongation factor Tu domain 2 Tlie_1138 PF09105 Elongation factor SelB, winged helix Tlie_1138 PF09106 Elongation factor SelB, winged helix Tlie_1138 PF00009 Elongation factor Tu GTP binding domain Tlie_1138 PF09107 Elongation factor SelB, winged helix Tlie_1139 PF03841 L-seryl-tRNA selenium transferase Tlie_1142 PF06969 HemN C-terminal domain Tlie_1142 PF04055 Radical SAM superfamily Tlie_1143 PF00679 Elongation factor G C-terminus Tlie_1143 PF03144 Elongation factor Tu domain 2 Tlie_1143 PF06421 GTP-binding protein LepA C-terminus Tlie_1143 PF00009 Elongation factor Tu GTP binding domain Tlie_1144 PF01259 SAICAR synthetase Tlie_1145 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Tlie_1147 PF02769 AIR synthase related protein, C-terminal domain Tlie_1147 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Tlie_1147 PF00586 AIR synthase related protein, N-terminal domain Tlie_1148 PF00156 Phosphoribosyl transferase domain Tlie_1149 PF02769 AIR synthase related protein, C-terminal domain Tlie_1149 PF00586 AIR synthase related protein, N-terminal domain Tlie_1150 PF00551 Formyl transferase Tlie_1151 PF02142 MGS-like domain Tlie_1151 PF01808 AICARFT/IMPCHase bienzyme Tlie_1152 PF02843 Phosphoribosylglycinamide synthetase, C domain Tlie_1152 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Tlie_1152 PF02844 Phosphoribosylglycinamide synthetase, N domain Tlie_1153 PF00731 AIR carboxylase Tlie_1156 PF00291 Pyridoxal-phosphate dependent enzyme Tlie_1157 PF02423 Ornithine cyclodeaminase/mu-crystallin family Tlie_1159 PF00742 Homoserine dehydrogenase Tlie_1159 PF03447 Homoserine dehydrogenase, NAD binding domain Tlie_1160 PF00266 Aminotransferase class-V Tlie_1162 PF00465 Iron-containing alcohol dehydrogenase Tlie_1163 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tlie_1163 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tlie_1164 PF01053 Cys/Met metabolism PLP-dependent enzyme Tlie_1166 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tlie_1166 PF01411 tRNA synthetases class II (A) Tlie_1166 PF02272 DHHA1 domain Tlie_1167 PF00708 Acylphosphatase Tlie_1168 PF00764 Arginosuccinate synthase Tlie_1170 PF01975 Survival protein SurE Tlie_1171 PF02163 Peptidase family M50 Tlie_1172 PF12627 Probable RNA and SrmB- binding site of polymerase A Tlie_1172 PF01966 HD domain Tlie_1172 PF01743 Poly A polymerase head domain Tlie_1173 PF01121 Dephospho-CoA kinase Tlie_1174 PF00580 UvrD/REP helicase N-terminal domain Tlie_1174 PF13361 UvrD-like helicase C-terminal domain Tlie_1175 PF02492 CobW/HypB/UreG, nucleotide-binding domain Tlie_1176 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Tlie_1177 PF00384 Molybdopterin oxidoreductase Tlie_1177 PF01568 Molydopterin dinucleotide binding domain Tlie_1177 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tlie_1178 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Tlie_1178 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Tlie_1179 PF00155 Aminotransferase class I and II Tlie_1180 PF00696 Amino acid kinase family Tlie_1181 PF01765 Ribosome recycling factor Tlie_1182 PF00696 Amino acid kinase family Tlie_1183 PF00889 Elongation factor TS Tlie_1184 PF00318 Ribosomal protein S2 Tlie_1185 PF02583 Metal-sensitive transcriptional repressor Tlie_1187 PF14437 MafB19-like deaminase Tlie_1191 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) Tlie_1192 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) Tlie_1193 PF09338 Glycine/sarcosine/betaine reductase component B subunits Tlie_1194 PF13556 PucR C-terminal helix-turn-helix domain Tlie_1194 PF17853 GGDEF-like domain Tlie_1194 PF05651 Putative sugar diacid recognition Tlie_1195 PF00919 Uncharacterized protein family UPF0004 Tlie_1195 PF01938 TRAM domain Tlie_1195 PF04055 Radical SAM superfamily Tlie_1197 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Tlie_1197 PF00476 DNA polymerase family A Tlie_1197 PF01367 5'-3' exonuclease, C-terminal SAM fold Tlie_1198 PF00749 tRNA synthetases class I (E and Q), catalytic domain Tlie_1200 PF00146 NADH dehydrogenase Tlie_1201 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Tlie_1201 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Tlie_1201 PF00374 Nickel-dependent hydrogenase Tlie_1202 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Tlie_1202 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Tlie_1203 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Tlie_1205 PF00361 Proton-conducting membrane transporter Tlie_1206 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Tlie_1208 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Tlie_1208 PF00361 Proton-conducting membrane transporter Tlie_1208 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Tlie_1208 PF13244 Domain of unknown function (DUF4040) Tlie_1211 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Tlie_1212 PF01899 Na+/H+ ion antiporter subunit Tlie_1214 PF00872 Transposase, Mutator family Tlie_1217 PF00474 Sodium:solute symporter family Tlie_1219 PF01544 CorA-like Mg2+ transporter protein Tlie_1220 PF07478 D-ala D-ala ligase C-terminus Tlie_1221 PF00872 Transposase, Mutator family Tlie_1222 PF07478 D-ala D-ala ligase C-terminus Tlie_1222 PF01820 D-ala D-ala ligase N-terminus Tlie_1225 PF01668 SmpB protein Tlie_1226 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Tlie_1226 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Tlie_1231 PF00390 Malic enzyme, N-terminal domain Tlie_1231 PF03949 Malic enzyme, NAD binding domain Tlie_1232 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Tlie_1232 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Tlie_1235 PF08645 Polynucleotide kinase 3 phosphatase Tlie_1236 PF16363 GDP-mannose 4,6 dehydratase Tlie_1237 PF00483 Nucleotidyl transferase Tlie_1238 PF13580 SIS domain Tlie_1239 PF00196 Bacterial regulatory proteins, luxR family Tlie_1239 PF00072 Response regulator receiver domain Tlie_1240 PF01171 PP-loop family Tlie_1241 PF01458 Uncharacterized protein family (UPF0051) Tlie_1242 PF00005 ABC transporter Tlie_1243 PF02548 Ketopantoate hydroxymethyltransferase Tlie_1244 PF02569 Pantoate-beta-alanine ligase Tlie_1245 PF00342 Phosphoglucose isomerase Tlie_1246 PF00462 Glutaredoxin Tlie_1248 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tlie_1248 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tlie_1248 PF00037 4Fe-4S binding domain Tlie_1249 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tlie_1249 PF01568 Molydopterin dinucleotide binding domain Tlie_1249 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tlie_1249 PF00384 Molybdopterin oxidoreductase Tlie_1249 PF00037 4Fe-4S binding domain Tlie_1250 PF03144 Elongation factor Tu domain 2 Tlie_1250 PF00009 Elongation factor Tu GTP binding domain Tlie_1250 PF14492 Elongation Factor G, domain II Tlie_1250 PF03764 Elongation factor G, domain IV Tlie_1250 PF00679 Elongation factor G C-terminus Tlie_1251 PF02637 GatB domain Tlie_1251 PF02934 GatB/GatE catalytic domain Tlie_1252 PF01425 Amidase Tlie_1254 PF12826 Helix-hairpin-helix motif Tlie_1254 PF00533 BRCA1 C Terminus (BRCT) domain Tlie_1254 PF01653 NAD-dependent DNA ligase adenylation domain Tlie_1254 PF03120 NAD-dependent DNA ligase OB-fold domain Tlie_1254 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Tlie_1255 PF00152 tRNA synthetases class II (D, K and N) Tlie_1255 PF01336 OB-fold nucleic acid binding domain Tlie_1256 PF01207 Dihydrouridine synthase (Dus) Tlie_1260 PF00919 Uncharacterized protein family UPF0004 Tlie_1260 PF04055 Radical SAM superfamily Tlie_1260 PF01938 TRAM domain Tlie_1262 PF02142 MGS-like domain Tlie_1262 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Tlie_1262 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tlie_1263 PF00117 Glutamine amidotransferase class-I Tlie_1263 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Tlie_1265 PF13289 SIR2-like domain Tlie_1266 PF08774 VRR-NUC domain Tlie_1266 PF04851 Type III restriction enzyme, res subunit Tlie_1267 PF01555 DNA methylase Tlie_1267 PF18273 Type III R-M EcoP15I C-terminal domain Tlie_1269 PF00176 SNF2 family N-terminal domain Tlie_1269 PF00271 Helicase conserved C-terminal domain Tlie_1271 PF16363 GDP-mannose 4,6 dehydratase Tlie_1272 PF01321 Creatinase/Prolidase N-terminal domain Tlie_1272 PF00557 Metallopeptidase family M24 Tlie_1274 PF02677 Epoxyqueuosine reductase QueH Tlie_1276 PF11849 Domain of unknown function (DUF3369) Tlie_1277 PF03544 Gram-negative bacterial TonB protein C-terminal Tlie_1278 PF02472 Biopolymer transport protein ExbD/TolR Tlie_1279 PF01497 Periplasmic binding protein Tlie_1280 PF01618 MotA/TolQ/ExbB proton channel family Tlie_1281 PF02780 Transketolase, C-terminal domain Tlie_1281 PF02779 Transketolase, pyrimidine binding domain Tlie_1281 PF00456 Transketolase, thiamine diphosphate binding domain Tlie_1282 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Tlie_1282 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Tlie_1283 PF01168 Alanine racemase, N-terminal domain Tlie_1283 PF00842 Alanine racemase, C-terminal domain Tlie_1284 PF01235 Sodium:alanine symporter family Tlie_1285 PF02504 Fatty acid synthesis protein Tlie_1286 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Tlie_1288 PF04723 Glycine reductase complex selenoprotein A Tlie_1289 PF04723 Glycine reductase complex selenoprotein A Tlie_1290 PF09338 Glycine/sarcosine/betaine reductase component B subunits Tlie_1291 PF00085 Thioredoxin Tlie_1294 PF00209 Sodium:neurotransmitter symporter family Tlie_1295 PF00795 Carbon-nitrogen hydrolase Tlie_1296 PF01455 HupF/HypC family Tlie_1297 PF01924 Hydrogenase formation hypA family Tlie_1298 PF02769 AIR synthase related protein, C-terminal domain Tlie_1298 PF00586 AIR synthase related protein, N-terminal domain Tlie_1299 PF13277 YmdB-like protein Tlie_1300 PF01966 HD domain Tlie_1300 PF12072 Domain of unknown function (DUF3552) Tlie_1300 PF00013 KH domain Tlie_1302 PF17191 RecG wedge domain Tlie_1302 PF00271 Helicase conserved C-terminal domain Tlie_1302 PF00270 DEAD/DEAH box helicase Tlie_1303 PF05103 DivIVA protein Tlie_1304 PF01168 Alanine racemase, N-terminal domain Tlie_1306 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tlie_1306 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tlie_1307 PF02649 Type I GTP cyclohydrolase folE2 Tlie_1308 PF01242 6-pyruvoyl tetrahydropterin synthase Tlie_1310 PF00701 Dihydrodipicolinate synthetase family Tlie_1313 PF02347 Glycine cleavage system P-protein Tlie_1314 PF02347 Glycine cleavage system P-protein Tlie_1317 PF00392 Bacterial regulatory proteins, gntR family Tlie_1317 PF07729 FCD domain Tlie_1318 PF00120 Glutamine synthetase, catalytic domain Tlie_1318 PF18318 Glutamine synthetase C-terminal domain Tlie_1318 PF12437 Glutamine synthetase type III N terminal Tlie_1320 PF00772 DnaB-like helicase N terminal domain Tlie_1320 PF03796 DnaB-like helicase C terminal domain Tlie_1321 PF03948 Ribosomal protein L9, C-terminal domain Tlie_1321 PF01281 Ribosomal protein L9, N-terminal domain Tlie_1324 PF00436 Single-strand binding protein family Tlie_1325 PF01250 Ribosomal protein S6 Tlie_1327 PF03485 Arginyl tRNA synthetase N terminal domain Tlie_1327 PF05746 DALR anticodon binding domain Tlie_1327 PF00750 tRNA synthetases class I (R) Tlie_1329 PF02810 SEC-C motif Tlie_1329 PF07517 SecA DEAD-like domain Tlie_1329 PF01043 SecA preprotein cross-linking domain Tlie_1329 PF07516 SecA Wing and Scaffold domain Tlie_1330 PF01212 Beta-eliminating lyase Tlie_1331 PF01066 CDP-alcohol phosphatidyltransferase Tlie_1332 PF00005 ABC transporter Tlie_1333 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tlie_1333 PF00005 ABC transporter Tlie_1334 PF02653 Branched-chain amino acid transport system / permease component Tlie_1334 PF11862 Domain of unknown function (DUF3382) Tlie_1335 PF02653 Branched-chain amino acid transport system / permease component Tlie_1337 PF00872 Transposase, Mutator family Tlie_1338 PF00155 Aminotransferase class I and II Tlie_1341 PF03477 ATP cone domain Tlie_1342 PF09424 Yqey-like protein Tlie_1343 PF01165 Ribosomal protein S21 Tlie_1344 PF01230 HIT domain Tlie_1345 PF01861 Branched-chain polyamine synthase A C-terminal domain Tlie_1346 PF04055 Radical SAM superfamily Tlie_1346 PF00919 Uncharacterized protein family UPF0004 Tlie_1350 PF00012 Hsp70 protein Tlie_1351 PF01025 GrpE Tlie_1352 PF01628 HrcA protein C terminal domain Tlie_1355 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Tlie_1355 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tlie_1355 PF18267 Rubredoxin NAD+ reductase C-terminal domain Tlie_1355 PF04324 BFD-like [2Fe-2S] binding domain Tlie_1356 PF00809 Pterin binding enzyme Tlie_1357 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Tlie_1360 PF00403 Heavy-metal-associated domain Tlie_1364 PF02554 Carbon starvation protein CstA Tlie_1364 PF13722 5TM C-terminal transporter carbon starvation CstA Tlie_1366 PF00709 Adenylosuccinate synthetase Tlie_1367 PF04748 Divergent polysaccharide deacetylase Tlie_1368 PF03572 Peptidase family S41 Tlie_1368 PF13180 PDZ domain Tlie_1369 PF01551 Peptidase family M23 Tlie_1370 PF18075 FtsX extracellular domain Tlie_1370 PF02687 FtsX-like permease family Tlie_1371 PF00005 ABC transporter Tlie_1372 PF02779 Transketolase, pyrimidine binding domain Tlie_1372 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Tlie_1372 PF02780 Transketolase, C-terminal domain Tlie_1373 PF00456 Transketolase, thiamine diphosphate binding domain Tlie_1373 PF02780 Transketolase, C-terminal domain Tlie_1373 PF02779 Transketolase, pyrimidine binding domain Tlie_1376 PF02545 Maf-like protein Tlie_1378 PF02673 Bacitracin resistance protein BacA Tlie_1380 PF00872 Transposase, Mutator family Tlie_1381 PF00753 Metallo-beta-lactamase superfamily Tlie_1381 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Tlie_1381 PF17770 Ribonuclease J C-terminal domain Tlie_1383 PF01139 tRNA-splicing ligase RtcB Tlie_1384 PF02675 S-adenosylmethionine decarboxylase Tlie_1387 PF00924 Mechanosensitive ion channel Tlie_1388 PF01910 Thiamine-binding protein Tlie_1391 PF12544 Lysine-2,3-aminomutase Tlie_1391 PF04055 Radical SAM superfamily Tlie_1392 PF00872 Transposase, Mutator family Tlie_1394 PF08279 HTH domain Tlie_1394 PF02829 3H domain Tlie_1396 PF00474 Sodium:solute symporter family Tlie_1397 PF00596 Class II Aldolase and Adducin N-terminal domain Tlie_1398 PF02567 Phenazine biosynthesis-like protein Tlie_1399 PF05698 Bacterial trigger factor protein (TF) C-terminus Tlie_1401 PF00004 ATPase family associated with various cellular activities (AAA) Tlie_1401 PF07724 AAA domain (Cdc48 subfamily) Tlie_1401 PF10431 C-terminal, D2-small domain, of ClpB protein Tlie_1401 PF17871 AAA lid domain Tlie_1401 PF02861 Clp amino terminal domain, pathogenicity island component Tlie_1402 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain Tlie_1403 PF02151 UvrB/uvrC motif Tlie_1404 PF05848 CtsR N-terminal HTH domain Tlie_1404 PF17727 CtsR C-terminal dimerization domain Tlie_1405 PF02660 Glycerol-3-phosphate acyltransferase Tlie_1406 PF13380 CoA binding domain Tlie_1406 PF13607 Succinyl-CoA ligase like flavodoxin domain Tlie_1406 PF00583 Acetyltransferase (GNAT) family Tlie_1407 PF00465 Iron-containing alcohol dehydrogenase Tlie_1408 PF03734 L,D-transpeptidase catalytic domain Tlie_1408 PF17969 L,D-transpeptidase C-terminal domain Tlie_1410 PF01432 Peptidase family M3 Tlie_1410 PF08439 Oligopeptidase F Tlie_1412 PF00872 Transposase, Mutator family Tlie_1417 PF00849 RNA pseudouridylate synthase Tlie_1417 PF04287 tRNA pseudouridine synthase C Tlie_1420 PF01245 Ribosomal protein L19 Tlie_1421 PF01746 tRNA (Guanine-1)-methyltransferase Tlie_1422 PF05239 PRC-barrel domain Tlie_1422 PF01782 RimM N-terminal domain Tlie_1424 PF00886 Ribosomal protein S16 Tlie_1425 PF00448 SRP54-type protein, GTPase domain Tlie_1425 PF02978 Signal peptide binding domain Tlie_1425 PF02881 SRP54-type protein, helical bundle domain Tlie_1426 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Tlie_1429 PF02386 Cation transport protein Tlie_1430 PF02080 TrkA-C domain Tlie_1430 PF02254 TrkA-N domain Tlie_1432 PF01925 Sulfite exporter TauE/SafE Tlie_1434 PF04073 Aminoacyl-tRNA editing domain Tlie_1434 PF03129 Anticodon binding domain Tlie_1434 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tlie_1436 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase Tlie_1437 PF01381 Helix-turn-helix Tlie_1439 PF01554 MatE Tlie_1440 PF01380 SIS domain Tlie_1440 PF01418 Helix-turn-helix domain, rpiR family Tlie_1441 PF12706 Beta-lactamase superfamily domain Tlie_1443 PF00152 tRNA synthetases class II (D, K and N) Tlie_1443 PF02938 GAD domain Tlie_1443 PF01336 OB-fold nucleic acid binding domain Tlie_1444 PF03129 Anticodon binding domain Tlie_1444 PF13393 Histidyl-tRNA synthetase Tlie_1445 PF04232 Stage V sporulation protein S (SpoVS) Tlie_1446 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Tlie_1446 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Tlie_1447 PF00571 CBS domain Tlie_1447 PF00478 IMP dehydrogenase / GMP reductase domain Tlie_1450 PF01614 Bacterial transcriptional regulator Tlie_1450 PF09339 IclR helix-turn-helix domain Tlie_1451 PF00749 tRNA synthetases class I (E and Q), catalytic domain Tlie_1451 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Tlie_1454 PF03807 NADP oxidoreductase coenzyme F420-dependent Tlie_1454 PF14748 Pyrroline-5-carboxylate reductase dimerisation Tlie_1456 PF02028 BCCT, betaine/carnitine/choline family transporter Tlie_1459 PF09338 Glycine/sarcosine/betaine reductase component B subunits Tlie_1460 PF04723 Glycine reductase complex selenoprotein A Tlie_1461 PF04723 Glycine reductase complex selenoprotein A Tlie_1462 PF00196 Bacterial regulatory proteins, luxR family Tlie_1462 PF00072 Response regulator receiver domain Tlie_1464 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tlie_1464 PF12838 4Fe-4S dicluster domain Tlie_1464 PF00384 Molybdopterin oxidoreductase Tlie_1464 PF01568 Molydopterin dinucleotide binding domain Tlie_1464 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tlie_1465 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tlie_1465 PF00037 4Fe-4S binding domain Tlie_1465 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tlie_1469 PF08443 RimK-like ATP-grasp domain Tlie_1470 PF02774 Semialdehyde dehydrogenase, dimerisation domain Tlie_1470 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tlie_1471 PF00696 Amino acid kinase family Tlie_1472 PF00202 Aminotransferase class-III Tlie_1473 PF01546 Peptidase family M20/M25/M40 Tlie_1475 PF00872 Transposase, Mutator family Tlie_1476 PF00155 Aminotransferase class I and II Tlie_1477 PF02779 Transketolase, pyrimidine binding domain Tlie_1477 PF02780 Transketolase, C-terminal domain Tlie_1478 PF00456 Transketolase, thiamine diphosphate binding domain Tlie_1479 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Tlie_1480 PF00464 Serine hydroxymethyltransferase Tlie_1482 PF18389 TrmO C-terminal domain Tlie_1482 PF01980 tRNA-methyltransferase O Tlie_1483 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Tlie_1484 PF02641 Uncharacterized ACR, COG1993 Tlie_1485 PF16527 Two-component sensor protein CpxA, periplasmic domain Tlie_1485 PF00512 His Kinase A (phospho-acceptor) domain Tlie_1485 PF00672 HAMP domain Tlie_1485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tlie_1486 PF00072 Response regulator receiver domain Tlie_1486 PF00486 Transcriptional regulatory protein, C terminal Tlie_1489 PF00270 DEAD/DEAH box helicase Tlie_1489 PF00271 Helicase conserved C-terminal domain Tlie_1491 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tlie_1491 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tlie_1492 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tlie_1492 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tlie_1492 PF16886 ATPsynthase alpha/beta subunit N-term extension Tlie_1496 PF01496 V-type ATPase 116kDa subunit family Tlie_1499 PF01813 ATP synthase subunit D Tlie_1500 PF07729 FCD domain Tlie_1500 PF00392 Bacterial regulatory proteins, gntR family Tlie_1504 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Tlie_1505 PF03480 Bacterial extracellular solute-binding protein, family 7 Tlie_1506 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Tlie_1506 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Tlie_1507 PF01053 Cys/Met metabolism PLP-dependent enzyme Tlie_1508 PF01037 Lrp/AsnC ligand binding domain Tlie_1509 PF08534 Redoxin Tlie_1510 PF01569 PAP2 superfamily Tlie_1511 PF00872 Transposase, Mutator family Tlie_1512 PF00795 Carbon-nitrogen hydrolase Tlie_1515 PF01923 Cobalamin adenosyltransferase Tlie_1516 PF07729 FCD domain Tlie_1516 PF00392 Bacterial regulatory proteins, gntR family Tlie_1519 PF00004 ATPase family associated with various cellular activities (AAA) Tlie_1519 PF12002 MgsA AAA+ ATPase C terminal Tlie_1519 PF16193 AAA C-terminal domain Tlie_1525 PF06750 Bacterial Peptidase A24 N-terminal domain Tlie_1525 PF01478 Type IV leader peptidase family Tlie_1526 PF00582 Universal stress protein family Tlie_1528 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Tlie_1528 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Tlie_1530 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tlie_1530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Tlie_1531 PF06071 Protein of unknown function (DUF933) Tlie_1531 PF01926 50S ribosome-binding GTPase Tlie_1532 PF00872 Transposase, Mutator family Tlie_1534 PF01475 Ferric uptake regulator family Tlie_1538 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tlie_1540 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tlie_1541 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Tlie_1542 PF03480 Bacterial extracellular solute-binding protein, family 7 Tlie_1543 PF10609 NUBPL iron-transfer P-loop NTPase Tlie_1546 PF02421 Ferrous iron transport protein B Tlie_1546 PF07664 Ferrous iron transport protein B C terminus Tlie_1546 PF17910 FeoB cytosolic helical domain Tlie_1546 PF07670 Nucleoside recognition Tlie_1546 PF04023 FeoA domain Tlie_1547 PF00005 ABC transporter Tlie_1548 PF01032 FecCD transport family Tlie_1549 PF00300 Histidine phosphatase superfamily (branch 1) Tlie_1549 PF13456 Reverse transcriptase-like Tlie_1551 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Tlie_1551 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Tlie_1552 PF03447 Homoserine dehydrogenase, NAD binding domain Tlie_1552 PF00742 Homoserine dehydrogenase Tlie_1552 PF01842 ACT domain Tlie_1553 PF00356 Bacterial regulatory proteins, lacI family Tlie_1554 PF00485 Phosphoribulokinase / Uridine kinase family Tlie_1555 PF00581 Rhodanese-like domain Tlie_1556 PF00528 Binding-protein-dependent transport system inner membrane component Tlie_1557 PF00571 CBS domain Tlie_1557 PF00005 ABC transporter Tlie_1560 PF07729 FCD domain Tlie_1560 PF00392 Bacterial regulatory proteins, gntR family Tlie_1562 PF00330 Aconitase family (aconitate hydratase) Tlie_1563 PF00694 Aconitase C-terminal domain Tlie_1564 PF00330 Aconitase family (aconitate hydratase) Tlie_1565 PF00694 Aconitase C-terminal domain Tlie_1566 PF18324 Hypothetical protein TT1725 Tlie_1566 PF00180 Isocitrate/isopropylmalate dehydrogenase Tlie_1568 PF03328 HpcH/HpaI aldolase/citrate lyase family Tlie_1569 PF04223 Citrate lyase, alpha subunit (CitF) Tlie_1570 PF00271 Helicase conserved C-terminal domain Tlie_1570 PF00270 DEAD/DEAH box helicase Tlie_1570 PF09369 Domain of unknown function (DUF1998) Tlie_1571 PF13482 RNase_H superfamily Tlie_1572 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tlie_1572 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tlie_1572 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tlie_1572 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tlie_1573 PF01370 NAD dependent epimerase/dehydratase family Tlie_1574 PF02901 Pyruvate formate lyase-like Tlie_1574 PF01228 Glycine radical Tlie_1575 PF04055 Radical SAM superfamily Tlie_1576 PF07729 FCD domain Tlie_1576 PF00392 Bacterial regulatory proteins, gntR family Tlie_1577 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tlie_1579 PF03480 Bacterial extracellular solute-binding protein, family 7 Tlie_1580 PF03313 Serine dehydratase alpha chain Tlie_1581 PF02423 Ornithine cyclodeaminase/mu-crystallin family Tlie_1582 PF01266 FAD dependent oxidoreductase Tlie_1583 PF05544 Proline racemase Tlie_1590 PF01565 FAD binding domain Tlie_1590 PF02913 FAD linked oxidases, C-terminal domain Tlie_1591 PF00766 Electron transfer flavoprotein FAD-binding domain Tlie_1591 PF01012 Electron transfer flavoprotein domain Tlie_1592 PF01012 Electron transfer flavoprotein domain Tlie_1594 PF00990 Diguanylate cyclase, GGDEF domain Tlie_1599 PF07724 AAA domain (Cdc48 subfamily) Tlie_1599 PF10431 C-terminal, D2-small domain, of ClpB protein Tlie_1599 PF02861 Clp amino terminal domain, pathogenicity island component Tlie_1599 PF00004 ATPase family associated with various cellular activities (AAA) Tlie_1599 PF17871 AAA lid domain Tlie_1600 PF00226 DnaJ domain Tlie_1600 PF01556 DnaJ C terminal domain Tlie_1601 PF00012 Hsp70 protein Tlie_1603 PF03129 Anticodon binding domain Tlie_1603 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tlie_1603 PF04073 Aminoacyl-tRNA editing domain Tlie_1606 PF00795 Carbon-nitrogen hydrolase Tlie_1607 PF02667 Short chain fatty acid transporter Tlie_1608 PF02515 CoA-transferase family III Tlie_1610 PF07311 Dodecin Tlie_1612 PF00226 DnaJ domain Tlie_1612 PF05099 Tellurite resistance protein TerB Tlie_1615 PF00374 Nickel-dependent hydrogenase Tlie_1616 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Tlie_1617 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tlie_1617 PF00384 Molybdopterin oxidoreductase Tlie_1617 PF01568 Molydopterin dinucleotide binding domain Tlie_1617 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tlie_1617 PF12838 4Fe-4S dicluster domain Tlie_1618 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tlie_1618 PF00037 4Fe-4S binding domain Tlie_1618 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tlie_1622 PF12804 MobA-like NTP transferase domain Tlie_1623 PF01226 Formate/nitrite transporter Tlie_1624 PF14480 DNA polymerase III polC-type N-terminus I Tlie_1624 PF11490 DNA polymerase III polC-type N-terminus II Tlie_1624 PF00929 Exonuclease Tlie_1624 PF07733 Bacterial DNA polymerase III alpha NTPase domain Tlie_1624 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Tlie_1624 PF02811 PHP domain Tlie_1627 PF13581 Histidine kinase-like ATPase domain Tlie_1629 PF00011 Hsp20/alpha crystallin family Tlie_1631 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain Tlie_1631 PF01522 Polysaccharide deacetylase Tlie_1632 PF01734 Patatin-like phospholipase Tlie_1633 PF03747 ADP-ribosylglycohydrolase Tlie_1634 PF03063 Prismane/CO dehydrogenase family Tlie_1635 PF02082 Transcriptional regulator Tlie_1636 PF02321 Outer membrane efflux protein Tlie_1637 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Tlie_1638 PF00005 ABC transporter Tlie_1638 PF12704 MacB-like periplasmic core domain Tlie_1638 PF02687 FtsX-like permease family Tlie_1639 PF02687 FtsX-like permease family Tlie_1639 PF12704 MacB-like periplasmic core domain Tlie_1639 PF00005 ABC transporter Tlie_1643 PF02361 Cobalt transport protein Tlie_1644 PF00005 ABC transporter Tlie_1646 PF00291 Pyridoxal-phosphate dependent enzyme Tlie_1649 PF04029 2-phosphosulpholactate phosphatase Tlie_1654 PF00270 DEAD/DEAH box helicase Tlie_1654 PF00271 Helicase conserved C-terminal domain Tlie_1654 PF08494 DEAD/H associated Tlie_1655 PF01370 NAD dependent epimerase/dehydratase family Tlie_1656 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tlie_1656 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tlie_1658 PF01678 Diaminopimelate epimerase Tlie_1659 PF01678 Diaminopimelate epimerase Tlie_1661 PF00155 Aminotransferase class I and II Tlie_1662 PF01546 Peptidase family M20/M25/M40 Tlie_1663 PF13396 Phospholipase_D-nuclease N-terminal Tlie_1663 PF13091 PLD-like domain Tlie_1666 PF01161 Phosphatidylethanolamine-binding protein Tlie_1667 PF03169 OPT oligopeptide transporter protein Tlie_1669 PF07687 Peptidase dimerisation domain Tlie_1669 PF01546 Peptidase family M20/M25/M40 Tlie_1670 PF00216 Bacterial DNA-binding protein Tlie_1671 PF00291 Pyridoxal-phosphate dependent enzyme Tlie_1672 PF00583 Acetyltransferase (GNAT) family Tlie_1672 PF00795 Carbon-nitrogen hydrolase Tlie_1673 PF00392 Bacterial regulatory proteins, gntR family Tlie_1673 PF07729 FCD domain Tlie_1674 PF03401 Tripartite tricarboxylate transporter family receptor Tlie_1676 PF01970 Tripartite tricarboxylate transporter TctA family Tlie_1677 PF00330 Aconitase family (aconitate hydratase) Tlie_1678 PF00180 Isocitrate/isopropylmalate dehydrogenase Tlie_1679 PF06857 Malonate decarboxylase delta subunit (MdcD) Tlie_1680 PF03328 HpcH/HpaI aldolase/citrate lyase family Tlie_1681 PF04223 Citrate lyase, alpha subunit (CitF) Tlie_1682 PF00313 'Cold-shock' DNA-binding domain Tlie_1683 PF01557 Fumarylacetoacetate (FAA) hydrolase family Tlie_1684 PF01966 HD domain Tlie_1685 PF01966 HD domain Tlie_1685 PF00072 Response regulator receiver domain Tlie_1686 PF01042 Endoribonuclease L-PSP Tlie_1687 PF09370 Phosphoenolpyruvate hydrolase-like Tlie_1692 PF07969 Amidohydrolase family Tlie_1693 PF03480 Bacterial extracellular solute-binding protein, family 7 Tlie_1694 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tlie_1696 PF00291 Pyridoxal-phosphate dependent enzyme Tlie_1698 PF00291 Pyridoxal-phosphate dependent enzyme Tlie_1699 PF00202 Aminotransferase class-III Tlie_1701 PF00871 Acetokinase family Tlie_1702 PF01515 Phosphate acetyl/butaryl transferase Tlie_1703 PF01515 Phosphate acetyl/butaryl transferase Tlie_1704 PF00871 Acetokinase family Tlie_1705 PF01063 Amino-transferase class IV Tlie_1708 PF16868 NMT1-like family Tlie_1711 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Tlie_1711 PF02558 Ketopantoate reductase PanE/ApbA Tlie_1712 PF02423 Ornithine cyclodeaminase/mu-crystallin family Tlie_1714 PF00989 PAS fold Tlie_1714 PF17203 Single cache domain 3 Tlie_1714 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Tlie_1714 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tlie_1715 PF00072 Response regulator receiver domain Tlie_1715 PF08279 HTH domain Tlie_1717 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tlie_1718 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tlie_1718 PF00205 Thiamine pyrophosphate enzyme, central domain Tlie_1718 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tlie_1719 PF01554 MatE Tlie_1721 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Tlie_1721 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Tlie_1722 PF01979 Amidohydrolase family Tlie_1726 PF02608 ABC transporter substrate-binding protein PnrA-like Tlie_1727 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tlie_1727 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tlie_1728 PF01546 Peptidase family M20/M25/M40 Tlie_1728 PF07687 Peptidase dimerisation domain Tlie_1729 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tlie_1731 PF03480 Bacterial extracellular solute-binding protein, family 7 Tlie_1733 PF00464 Serine hydroxymethyltransferase Tlie_1734 PF00291 Pyridoxal-phosphate dependent enzyme Tlie_1735 PF07687 Peptidase dimerisation domain Tlie_1735 PF01546 Peptidase family M20/M25/M40 Tlie_1736 PF01546 Peptidase family M20/M25/M40 Tlie_1736 PF07687 Peptidase dimerisation domain Tlie_1737 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tlie_1737 PF03466 LysR substrate binding domain Tlie_1738 PF12849 PBP superfamily domain Tlie_1739 PF00528 Binding-protein-dependent transport system inner membrane component Tlie_1740 PF00005 ABC transporter Tlie_1740 PF08402 TOBE domain Tlie_1742 PF01546 Peptidase family M20/M25/M40 Tlie_1742 PF07687 Peptidase dimerisation domain Tlie_1743 PF03806 AbgT putative transporter family Tlie_1744 PF01321 Creatinase/Prolidase N-terminal domain Tlie_1744 PF00557 Metallopeptidase family M24 Tlie_1747 PF00005 ABC transporter Tlie_1748 PF12683 Protein of unknown function (DUF3798) Tlie_1749 PF07729 FCD domain Tlie_1749 PF00392 Bacterial regulatory proteins, gntR family Tlie_1750 PF00005 ABC transporter Tlie_1751 PF01032 FecCD transport family Tlie_1753 PF00990 Diguanylate cyclase, GGDEF domain Tlie_1754 PF02423 Ornithine cyclodeaminase/mu-crystallin family Tlie_1755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tlie_1756 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Tlie_1756 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Tlie_1756 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Tlie_1766 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tlie_1766 PF00512 His Kinase A (phospho-acceptor) domain Tlie_1767 PF00486 Transcriptional regulatory protein, C terminal Tlie_1767 PF00072 Response regulator receiver domain Tlie_1773 PF00582 Universal stress protein family Tlie_1774 PF01758 Sodium Bile acid symporter family Tlie_1776 PF01451 Low molecular weight phosphotyrosine protein phosphatase Tlie_1777 PF01022 Bacterial regulatory protein, arsR family Tlie_1778 PF00582 Universal stress protein family Tlie_1782 PF13438 Domain of unknown function (DUF4113) Tlie_1782 PF11799 impB/mucB/samB family C-terminal domain Tlie_1782 PF00817 impB/mucB/samB family Tlie_1786 PF00872 Transposase, Mutator family Tlie_1792 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tlie_1792 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tlie_1792 PF00205 Thiamine pyrophosphate enzyme, central domain Tlie_1793 PF00155 Aminotransferase class I and II Tlie_1794 PF00571 CBS domain Tlie_1794 PF00005 ABC transporter Tlie_1795 PF00528 Binding-protein-dependent transport system inner membrane component Tlie_1798 PF01547 Bacterial extracellular solute-binding protein Tlie_1799 PF00528 Binding-protein-dependent transport system inner membrane component Tlie_1800 PF00005 ABC transporter Tlie_1800 PF17845 FbpC C-terminal regulatory nucleotide binding domain Tlie_1801 PF01174 SNO glutamine amidotransferase family Tlie_1802 PF01680 SOR/SNZ family Tlie_1809 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Tlie_1811 PF02397 Bacterial sugar transferase Tlie_1813 PF02350 UDP-N-acetylglucosamine 2-epimerase Tlie_1821 PF12464 Maltose acetyltransferase Tlie_1821 PF00132 Bacterial transferase hexapeptide (six repeats) Tlie_1825 PF00132 Bacterial transferase hexapeptide (six repeats) Tlie_1826 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Tlie_1826 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Tlie_1826 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Tlie_1827 PF02719 Polysaccharide biosynthesis protein Tlie_1828 PF03023 Lipid II flippase MurJ Tlie_1830 PF00872 Transposase, Mutator family Tlie_1832 PF00474 Sodium:solute symporter family Tlie_1833 PF00694 Aconitase C-terminal domain Tlie_1834 PF00330 Aconitase family (aconitate hydratase) Tlie_1835 PF00682 HMGL-like Tlie_1836 PF02515 CoA-transferase family III Tlie_1838 PF00800 Prephenate dehydratase Tlie_1838 PF01842 ACT domain Tlie_1838 PF01817 Chorismate mutase type II Tlie_1839 PF00290 Tryptophan synthase alpha chain Tlie_1840 PF00291 Pyridoxal-phosphate dependent enzyme Tlie_1841 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Tlie_1842 PF00218 Indole-3-glycerol phosphate synthase Tlie_1843 PF00591 Glycosyl transferase family, a/b domain Tlie_1843 PF02885 Glycosyl transferase family, helical bundle domain Tlie_1844 PF00591 Glycosyl transferase family, a/b domain Tlie_1844 PF02885 Glycosyl transferase family, helical bundle domain Tlie_1844 PF00117 Glutamine amidotransferase class-I Tlie_1845 PF04715 Anthranilate synthase component I, N terminal region Tlie_1845 PF00425 chorismate binding enzyme Tlie_1846 PF00672 HAMP domain Tlie_1846 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tlie_1846 PF02743 Cache domain Tlie_1847 PF00497 Bacterial extracellular solute-binding proteins, family 3 Tlie_1849 PF07690 Major Facilitator Superfamily Tlie_1850 PF01964 Radical SAM ThiC family Tlie_1854 PF00072 Response regulator receiver domain Tlie_1854 PF00990 Diguanylate cyclase, GGDEF domain Tlie_1855 PF00990 Diguanylate cyclase, GGDEF domain Tlie_1855 PF00072 Response regulator receiver domain Tlie_1857 PF00872 Transposase, Mutator family Tlie_1859 PF00390 Malic enzyme, N-terminal domain Tlie_1859 PF03949 Malic enzyme, NAD binding domain Tlie_1860 PF01969 Protein of unknown function DUF111 Tlie_1861 PF00731 AIR carboxylase Tlie_1862 PF02540 NAD synthase Tlie_1863 PF09861 Lactate racemase N-terminal domain Tlie_1865 PF00392 Bacterial regulatory proteins, gntR family Tlie_1865 PF07729 FCD domain Tlie_1868 PF02146 Sir2 family Tlie_1869 PF00892 EamA-like transporter family Tlie_1870 PF02632 BioY family Tlie_1871 PF01293 Phosphoenolpyruvate carboxykinase Tlie_1872 PF01205 Uncharacterized protein family UPF0029 Tlie_1872 PF09186 Domain of unknown function (DUF1949) Tlie_1873 PF01230 HIT domain Tlie_1875 PF02195 ParB-like nuclease domain Tlie_1875 PF17762 HTH domain found in ParB protein Tlie_1876 PF13614 AAA domain Tlie_1877 PF02527 rRNA small subunit methyltransferase G Tlie_1881 PF00291 Pyridoxal-phosphate dependent enzyme Tlie_1883 PF00266 Aminotransferase class-V Tlie_1884 PF12801 4Fe-4S binding domain Tlie_1887 PF00872 Transposase, Mutator family Tlie_1889 PF00171 Aldehyde dehydrogenase family Tlie_1890 PF02080 TrkA-C domain Tlie_1890 PF06826 Predicted Permease Membrane Region Tlie_1891 PF00872 Transposase, Mutator family Tlie_1893 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Tlie_1893 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Tlie_1894 PF01761 3-dehydroquinate synthase Tlie_1894 PF01202 Shikimate kinase Tlie_1895 PF01264 Chorismate synthase Tlie_1896 PF01488 Shikimate / quinate 5-dehydrogenase Tlie_1896 PF08501 Shikimate dehydrogenase substrate binding domain Tlie_1896 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Tlie_1897 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tlie_1898 PF01842 ACT domain Tlie_1898 PF02153 Prephenate dehydrogenase Tlie_1899 PF00793 DAHP synthetase I family Tlie_1899 PF18152 DAHP synthase ferredoxin-like domain Tlie_1902 PF02915 Rubrerythrin Tlie_1903 PF12706 Beta-lactamase superfamily domain Tlie_1905 PF01171 PP-loop family Tlie_1910 PF00202 Aminotransferase class-III Tlie_1911 PF05145 Transition state regulatory protein AbrB Tlie_1914 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Tlie_1914 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain