Tlie_0668 f31ff86efce547b35c2ae6bc26c50e46 256 SUPERFAMILY SSF55920 4 254 6.28E-80 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Tlie_0668 f31ff86efce547b35c2ae6bc26c50e46 256 Pfam PF00557 Metallopeptidase family M24 12 246 2.5E-45 T 14-10-2018 IPR000994 Peptidase M24 Tlie_0668 f31ff86efce547b35c2ae6bc26c50e46 256 Hamap MF_01974 Methionine aminopeptidase [map]. 2 255 38.578 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tlie_0668 f31ff86efce547b35c2ae6bc26c50e46 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 1.1E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tlie_0668 f31ff86efce547b35c2ae6bc26c50e46 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 166 178 1.1E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tlie_0668 f31ff86efce547b35c2ae6bc26c50e46 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 73 86 1.1E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tlie_0668 f31ff86efce547b35c2ae6bc26c50e46 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 197 209 1.1E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tlie_0668 f31ff86efce547b35c2ae6bc26c50e46 256 Gene3D G3DSA:3.90.230.10 1 254 2.2E-94 T 14-10-2018 Tlie_0668 f31ff86efce547b35c2ae6bc26c50e46 256 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 172 190 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tlie_0668 f31ff86efce547b35c2ae6bc26c50e46 256 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 253 1.9E-90 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tlie_0472 160f0727dbfe76b48a8f72e0a9c6cb4e 271 Pfam PF02535 ZIP Zinc transporter 123 266 7.5E-15 T 14-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 Tlie_0837 4b75104f6fbc2a826c79ea5f793d2652 362 Gene3D G3DSA:3.90.1150.10 17 357 2.1E-88 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_0837 4b75104f6fbc2a826c79ea5f793d2652 362 Pfam PF00155 Aminotransferase class I and II 20 356 3.1E-38 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tlie_0837 4b75104f6fbc2a826c79ea5f793d2652 362 Gene3D G3DSA:3.40.640.10 42 261 2.1E-88 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0837 4b75104f6fbc2a826c79ea5f793d2652 362 SUPERFAMILY SSF53383 16 359 2.09E-61 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0837 4b75104f6fbc2a826c79ea5f793d2652 362 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 211 220 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Tlie_1600 2eef0d4a0da28918dd966d6edfbc5e9f 306 SUPERFAMILY SSF46565 2 72 3.53E-35 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Tlie_1600 2eef0d4a0da28918dd966d6edfbc5e9f 306 PRINTS PR00625 DnaJ domain signature 61 80 3.0E-26 T 14-10-2018 IPR001623 DnaJ domain Tlie_1600 2eef0d4a0da28918dd966d6edfbc5e9f 306 PRINTS PR00625 DnaJ domain signature 25 40 3.0E-26 T 14-10-2018 IPR001623 DnaJ domain Tlie_1600 2eef0d4a0da28918dd966d6edfbc5e9f 306 PRINTS PR00625 DnaJ domain signature 41 61 3.0E-26 T 14-10-2018 IPR001623 DnaJ domain Tlie_1600 2eef0d4a0da28918dd966d6edfbc5e9f 306 PRINTS PR00625 DnaJ domain signature 7 25 3.0E-26 T 14-10-2018 IPR001623 DnaJ domain Tlie_1600 2eef0d4a0da28918dd966d6edfbc5e9f 306 Gene3D G3DSA:2.60.260.20 131 202 4.9E-21 T 14-10-2018 Tlie_1600 2eef0d4a0da28918dd966d6edfbc5e9f 306 Pfam PF00226 DnaJ domain 5 66 7.1E-29 T 14-10-2018 IPR001623 DnaJ domain Tlie_1600 2eef0d4a0da28918dd966d6edfbc5e9f 306 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 14-10-2018 IPR018253 DnaJ domain, conserved site Tlie_1600 2eef0d4a0da28918dd966d6edfbc5e9f 306 SMART SM00271 4 61 1.1E-32 T 14-10-2018 IPR001623 DnaJ domain Tlie_1600 2eef0d4a0da28918dd966d6edfbc5e9f 306 SUPERFAMILY SSF49493 209 293 2.09E-21 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Tlie_1600 2eef0d4a0da28918dd966d6edfbc5e9f 306 Gene3D G3DSA:1.10.287.110 2 122 1.5E-38 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Tlie_1600 2eef0d4a0da28918dd966d6edfbc5e9f 306 Pfam PF01556 DnaJ C terminal domain 135 282 9.6E-39 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal Tlie_1600 2eef0d4a0da28918dd966d6edfbc5e9f 306 SUPERFAMILY SSF49493 129 216 4.06E-18 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Tlie_1600 2eef0d4a0da28918dd966d6edfbc5e9f 306 Gene3D G3DSA:2.60.260.20 204 303 2.2E-29 T 14-10-2018 Tlie_0687 065435d54fb5c1745be69985a8ddfce7 400 SUPERFAMILY SSF55973 4 110 8.24E-45 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tlie_0687 065435d54fb5c1745be69985a8ddfce7 400 SUPERFAMILY SSF55973 245 396 6.67E-63 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tlie_0687 065435d54fb5c1745be69985a8ddfce7 400 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 396 8.2E-170 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tlie_0687 065435d54fb5c1745be69985a8ddfce7 400 PIRSF PIRSF000497 1 398 6.5E-164 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tlie_0687 065435d54fb5c1745be69985a8ddfce7 400 Pfam PF02772 S-adenosylmethionine synthetase, central domain 127 243 2.2E-45 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tlie_0687 065435d54fb5c1745be69985a8ddfce7 400 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 271 279 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tlie_0687 065435d54fb5c1745be69985a8ddfce7 400 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 1.7E-41 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tlie_0687 065435d54fb5c1745be69985a8ddfce7 400 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 397 55.464 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tlie_0687 065435d54fb5c1745be69985a8ddfce7 400 SUPERFAMILY SSF55973 122 244 1.77E-48 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tlie_0687 065435d54fb5c1745be69985a8ddfce7 400 Gene3D G3DSA:3.30.300.10 6 245 1.9E-165 T 14-10-2018 Tlie_0687 065435d54fb5c1745be69985a8ddfce7 400 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 245 385 2.7E-63 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tlie_0687 065435d54fb5c1745be69985a8ddfce7 400 Gene3D G3DSA:3.30.300.10 12 282 1.9E-165 T 14-10-2018 Tlie_0687 065435d54fb5c1745be69985a8ddfce7 400 Gene3D G3DSA:3.30.300.10 103 388 1.9E-165 T 14-10-2018 Tlie_0687 065435d54fb5c1745be69985a8ddfce7 400 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 128 138 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tlie_0102 f02278cbcf152a300ec68403d66a2910 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 79 98 9.8E-23 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tlie_0102 f02278cbcf152a300ec68403d66a2910 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 9.8E-23 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tlie_0102 f02278cbcf152a300ec68403d66a2910 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 17 38 9.8E-23 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tlie_0102 f02278cbcf152a300ec68403d66a2910 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 9.8E-23 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tlie_0102 f02278cbcf152a300ec68403d66a2910 258 Pfam PF01311 Bacterial export proteins, family 1 10 237 4.1E-53 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tlie_1544 e821c8b1abe1a18726990ed0aac137f0 109 Gene3D G3DSA:3.30.420.130 3 109 2.4E-23 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Tlie_1544 e821c8b1abe1a18726990ed0aac137f0 109 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 15 105 8.0E-18 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Tlie_1544 e821c8b1abe1a18726990ed0aac137f0 109 SUPERFAMILY SSF53146 5 106 1.27E-19 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Tlie_0605 e057d724f746db4e4b6ee3214647156f 652 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 3 652 25.123 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tlie_0605 e057d724f746db4e4b6ee3214647156f 652 PIRSF PIRSF001265 1 652 1.6E-267 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tlie_0605 e057d724f746db4e4b6ee3214647156f 652 Pfam PF03030 Inorganic H+ pyrophosphatase 14 648 3.4E-271 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tlie_0605 e057d724f746db4e4b6ee3214647156f 652 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 7 652 7.2E-259 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tlie_0157 50642401d41003defa4329bf575e755a 414 Gene3D G3DSA:3.30.360.10 142 353 1.9E-78 T 14-10-2018 Tlie_0157 50642401d41003defa4329bf575e755a 414 Gene3D G3DSA:3.40.50.720 6 399 1.9E-78 T 14-10-2018 Tlie_0157 50642401d41003defa4329bf575e755a 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 141 397 2.7E-45 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 Tlie_0157 50642401d41003defa4329bf575e755a 414 SUPERFAMILY SSF55347 142 328 1.9E-27 T 14-10-2018 Tlie_0157 50642401d41003defa4329bf575e755a 414 SUPERFAMILY SSF51735 3 156 4.27E-10 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0157 50642401d41003defa4329bf575e755a 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 6 137 6.2E-15 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 Tlie_0186 78b86f5b433f3dd6182941bc3e1e77dc 456 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 390 410 2.3E-18 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_0186 78b86f5b433f3dd6182941bc3e1e77dc 456 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 21 42 2.3E-18 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_0186 78b86f5b433f3dd6182941bc3e1e77dc 456 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 50 69 2.3E-18 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_0186 78b86f5b433f3dd6182941bc3e1e77dc 456 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 94 120 2.3E-18 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_0186 78b86f5b433f3dd6182941bc3e1e77dc 456 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 37 51 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_0186 78b86f5b433f3dd6182941bc3e1e77dc 456 SUPERFAMILY SSF161070 13 451 1.83E-143 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 Tlie_0186 78b86f5b433f3dd6182941bc3e1e77dc 456 Pfam PF00209 Sodium:neurotransmitter symporter family 159 451 2.3E-43 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_0186 78b86f5b433f3dd6182941bc3e1e77dc 456 Pfam PF00209 Sodium:neurotransmitter symporter family 13 130 6.0E-31 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_0425 02e15a205ee67f70ee21538fab24647a 530 SUPERFAMILY SSF53187 308 528 1.38E-45 T 14-10-2018 Tlie_0425 02e15a205ee67f70ee21538fab24647a 530 Gene3D G3DSA:3.40.630.40 297 530 3.0E-66 T 14-10-2018 Tlie_0425 02e15a205ee67f70ee21538fab24647a 530 SMART SM00646 368 525 1.6E-32 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Tlie_0425 02e15a205ee67f70ee21538fab24647a 530 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 310 525 7.0E-49 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Tlie_1354 3bc13ead4985a1f5cd1539197b06f7a0 216 PIRSF PIRSF000709 3 185 8.9E-17 T 14-10-2018 Tlie_1354 3bc13ead4985a1f5cd1539197b06f7a0 216 SMART SM00855 9 164 1.5E-18 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tlie_1354 3bc13ead4985a1f5cd1539197b06f7a0 216 Gene3D G3DSA:3.40.50.1240 8 215 8.8E-59 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Tlie_1354 3bc13ead4985a1f5cd1539197b06f7a0 216 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 10 198 3.2E-55 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tlie_1354 3bc13ead4985a1f5cd1539197b06f7a0 216 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 12 21 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Tlie_1354 3bc13ead4985a1f5cd1539197b06f7a0 216 SUPERFAMILY SSF53254 8 210 3.67E-54 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Tlie_0753 cba0d373167ae5a61fd3a4591e5ed1b5 1137 Gene3D G3DSA:1.10.150.870 766 872 1.3E-7 T 14-10-2018 Tlie_0753 cba0d373167ae5a61fd3a4591e5ed1b5 1137 Gene3D G3DSA:3.20.20.140 1 275 1.2E-106 T 14-10-2018 Tlie_0753 cba0d373167ae5a61fd3a4591e5ed1b5 1137 SUPERFAMILY SSF89550 5 265 3.14E-34 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tlie_0753 cba0d373167ae5a61fd3a4591e5ed1b5 1137 Pfam PF14579 Helix-hairpin-helix motif 796 884 1.0E-26 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_0753 cba0d373167ae5a61fd3a4591e5ed1b5 1137 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1015 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_0753 cba0d373167ae5a61fd3a4591e5ed1b5 1137 Pfam PF02811 PHP domain 7 175 1.3E-50 T 14-10-2018 IPR004013 PHP domain GO:0003824 Tlie_0753 cba0d373167ae5a61fd3a4591e5ed1b5 1137 SMART SM00481 6 73 7.1E-26 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Tlie_0753 cba0d373167ae5a61fd3a4591e5ed1b5 1137 Gene3D G3DSA:1.10.10.1600 431 507 5.1E-25 T 14-10-2018 Tlie_0753 cba0d373167ae5a61fd3a4591e5ed1b5 1137 Pfam PF01336 OB-fold nucleic acid binding domain 980 1051 3.0E-8 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Tlie_0753 cba0d373167ae5a61fd3a4591e5ed1b5 1137 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 297 721 2.3E-179 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_1396 d0dbad7f3e099178b3b672d89761c872 480 Pfam PF00474 Sodium:solute symporter family 35 422 2.5E-38 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Tlie_1396 d0dbad7f3e099178b3b672d89761c872 480 Gene3D G3DSA:1.20.1730.10 22 477 3.3E-62 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Tlie_1454 3c935bb023ecf7944f53f9170e69e85c 275 PIRSF PIRSF000193 5 264 3.6E-70 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Tlie_1454 3c935bb023ecf7944f53f9170e69e85c 275 SUPERFAMILY SSF48179 156 264 3.57E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tlie_1454 3c935bb023ecf7944f53f9170e69e85c 275 Gene3D G3DSA:1.10.3730.10 160 262 2.1E-34 T 14-10-2018 Tlie_1454 3c935bb023ecf7944f53f9170e69e85c 275 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 8 260 5.1E-72 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Tlie_1454 3c935bb023ecf7944f53f9170e69e85c 275 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 157 259 7.5E-33 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Tlie_1454 3c935bb023ecf7944f53f9170e69e85c 275 SUPERFAMILY SSF51735 7 154 6.69E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1454 3c935bb023ecf7944f53f9170e69e85c 275 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 6 261 24.468 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Tlie_1454 3c935bb023ecf7944f53f9170e69e85c 275 Gene3D G3DSA:3.40.50.720 1 159 2.6E-42 T 14-10-2018 Tlie_1454 3c935bb023ecf7944f53f9170e69e85c 275 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 8 94 1.3E-17 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Tlie_0617 0730f6bffaf57a0351e2316e570d7779 775 Gene3D G3DSA:1.10.3210.10 49 242 4.5E-78 T 14-10-2018 Tlie_0617 0730f6bffaf57a0351e2316e570d7779 775 SMART SM00954 287 397 1.4E-63 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 Tlie_0617 0730f6bffaf57a0351e2316e570d7779 775 Pfam PF13328 HD domain 78 227 5.3E-46 T 14-10-2018 IPR003607 HD/PDEase domain Tlie_0617 0730f6bffaf57a0351e2316e570d7779 775 SUPERFAMILY SSF55021 699 774 4.16E-7 T 14-10-2018 Tlie_0617 0730f6bffaf57a0351e2316e570d7779 775 Pfam PF13291 ACT domain 698 774 1.9E-18 T 14-10-2018 IPR002912 ACT domain Tlie_0617 0730f6bffaf57a0351e2316e570d7779 775 SUPERFAMILY SSF81301 233 443 1.8E-63 T 14-10-2018 Tlie_0617 0730f6bffaf57a0351e2316e570d7779 775 SMART SM00471 93 205 4.4E-7 T 14-10-2018 IPR003607 HD/PDEase domain Tlie_0617 0730f6bffaf57a0351e2316e570d7779 775 Gene3D G3DSA:3.10.20.30 432 506 9.7E-33 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Tlie_0617 0730f6bffaf57a0351e2316e570d7779 775 SUPERFAMILY SSF109604 55 241 1.73E-69 T 14-10-2018 Tlie_0617 0730f6bffaf57a0351e2316e570d7779 775 Gene3D G3DSA:3.30.70.260 698 775 2.2E-14 T 14-10-2018 Tlie_0617 0730f6bffaf57a0351e2316e570d7779 775 SUPERFAMILY SSF81271 426 498 1.64E-24 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Tlie_0617 0730f6bffaf57a0351e2316e570d7779 775 Pfam PF02824 TGS domain 439 498 2.0E-22 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Tlie_0617 0730f6bffaf57a0351e2316e570d7779 775 Gene3D G3DSA:3.30.460.10 245 376 7.9E-52 T 14-10-2018 Tlie_0617 0730f6bffaf57a0351e2316e570d7779 775 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 78 773 4.0E-236 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 Tlie_0617 0730f6bffaf57a0351e2316e570d7779 775 Pfam PF04607 Region found in RelA / SpoT proteins 287 397 5.5E-37 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 Tlie_1177 b5fd3ba979096068252faceee0b8621c 628 Gene3D G3DSA:3.40.50.740 72 462 5.3E-73 T 14-10-2018 Tlie_1177 b5fd3ba979096068252faceee0b8621c 628 SMART SM00926 2 58 1.4E-10 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1177 b5fd3ba979096068252faceee0b8621c 628 Gene3D G3DSA:2.20.25.90 1 63 4.6E-8 T 14-10-2018 Tlie_1177 b5fd3ba979096068252faceee0b8621c 628 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 6 56 5.7E-6 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1177 b5fd3ba979096068252faceee0b8621c 628 Gene3D G3DSA:3.30.2070.10 416 496 5.3E-73 T 14-10-2018 Tlie_1177 b5fd3ba979096068252faceee0b8621c 628 Gene3D G3DSA:2.40.40.20 541 628 2.6E-6 T 14-10-2018 Tlie_1177 b5fd3ba979096068252faceee0b8621c 628 Gene3D G3DSA:3.40.228.10 134 499 5.3E-73 T 14-10-2018 Tlie_1177 b5fd3ba979096068252faceee0b8621c 628 SUPERFAMILY SSF50692 524 627 7.46E-12 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tlie_1177 b5fd3ba979096068252faceee0b8621c 628 SUPERFAMILY SSF53706 3 489 4.32E-98 T 14-10-2018 Tlie_1177 b5fd3ba979096068252faceee0b8621c 628 Pfam PF00384 Molybdopterin oxidoreductase 366 457 1.5E-6 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1177 b5fd3ba979096068252faceee0b8621c 628 Pfam PF00384 Molybdopterin oxidoreductase 61 322 1.9E-19 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1177 b5fd3ba979096068252faceee0b8621c 628 Pfam PF01568 Molydopterin dinucleotide binding domain 531 618 4.4E-9 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Tlie_1009 f47b2e63752b868e3f514b9e0ded95bc 276 SUPERFAMILY SSF55174 6 62 2.8E-12 T 14-10-2018 Tlie_1009 f47b2e63752b868e3f514b9e0ded95bc 276 Gene3D G3DSA:3.10.290.10 2 64 4.6E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tlie_1009 f47b2e63752b868e3f514b9e0ded95bc 276 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 7 239 4.3E-75 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 Tlie_1009 f47b2e63752b868e3f514b9e0ded95bc 276 SMART SM00363 6 68 5.0E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_1009 f47b2e63752b868e3f514b9e0ded95bc 276 SUPERFAMILY SSF53335 60 247 1.16E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_1009 f47b2e63752b868e3f514b9e0ded95bc 276 PIRSF PIRSF005578 2 265 1.8E-97 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 Tlie_1009 f47b2e63752b868e3f514b9e0ded95bc 276 Pfam PF01479 S4 domain 6 50 1.0E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_1009 f47b2e63752b868e3f514b9e0ded95bc 276 Gene3D G3DSA:3.40.50.150 65 275 2.4E-79 T 14-10-2018 Tlie_1009 f47b2e63752b868e3f514b9e0ded95bc 276 Pfam PF01728 FtsJ-like methyltransferase 62 243 1.2E-19 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Tlie_1673 0f4d4a7c5cd97edc25318588bda3e316 232 SMART SM00895 88 212 2.2E-23 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_1673 0f4d4a7c5cd97edc25318588bda3e316 232 PRINTS PR00598 Bacterial regulatory protein MarR family signature 103 123 1.7E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tlie_1673 0f4d4a7c5cd97edc25318588bda3e316 232 PRINTS PR00598 Bacterial regulatory protein MarR family signature 39 55 1.7E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tlie_1673 0f4d4a7c5cd97edc25318588bda3e316 232 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 71 1.7E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tlie_1673 0f4d4a7c5cd97edc25318588bda3e316 232 Gene3D G3DSA:1.10.10.10 15 79 4.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1673 0f4d4a7c5cd97edc25318588bda3e316 232 SUPERFAMILY SSF48008 84 217 3.4E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_1673 0f4d4a7c5cd97edc25318588bda3e316 232 Pfam PF07729 FCD domain 88 211 2.9E-29 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_1673 0f4d4a7c5cd97edc25318588bda3e316 232 Gene3D G3DSA:1.20.120.530 81 221 2.1E-31 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_1673 0f4d4a7c5cd97edc25318588bda3e316 232 SMART SM00345 20 78 1.3E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1673 0f4d4a7c5cd97edc25318588bda3e316 232 SUPERFAMILY SSF46785 14 96 9.12E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1673 0f4d4a7c5cd97edc25318588bda3e316 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 1.9E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1673 0f4d4a7c5cd97edc25318588bda3e316 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 1.9E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1673 0f4d4a7c5cd97edc25318588bda3e316 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 78 6.5E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0182 347c19f280d8e9887d4354aca3973732 221 Gene3D G3DSA:1.10.10.10 1 69 2.9E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0182 347c19f280d8e9887d4354aca3973732 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 68 5.6E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0182 347c19f280d8e9887d4354aca3973732 221 SMART SM00345 10 68 1.9E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0182 347c19f280d8e9887d4354aca3973732 221 SUPERFAMILY SSF46785 6 72 1.34E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_0182 347c19f280d8e9887d4354aca3973732 221 SUPERFAMILY SSF48008 74 215 1.18E-11 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0182 347c19f280d8e9887d4354aca3973732 221 Pfam PF07729 FCD domain 79 207 1.3E-10 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_0182 347c19f280d8e9887d4354aca3973732 221 Gene3D G3DSA:1.20.120.530 72 217 1.3E-12 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_1073 cb5a1e49971341ca35f00f5465a19535 837 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 667 770 3.2E-8 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Tlie_1073 cb5a1e49971341ca35f00f5465a19535 837 SUPERFAMILY SSF54211 582 775 7.21E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_1073 cb5a1e49971341ca35f00f5465a19535 837 Gene3D G3DSA:3.40.50.300 212 469 1.4E-59 T 14-10-2018 Tlie_1073 cb5a1e49971341ca35f00f5465a19535 837 Gene3D G3DSA:3.40.50.300 5 164 4.8E-25 T 14-10-2018 Tlie_1073 cb5a1e49971341ca35f00f5465a19535 837 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 664 683 1.4E-9 T 14-10-2018 Tlie_1073 cb5a1e49971341ca35f00f5465a19535 837 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 694 713 1.4E-9 T 14-10-2018 Tlie_1073 cb5a1e49971341ca35f00f5465a19535 837 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 583 599 1.4E-9 T 14-10-2018 Tlie_1073 cb5a1e49971341ca35f00f5465a19535 837 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 724 742 1.4E-9 T 14-10-2018 Tlie_1073 cb5a1e49971341ca35f00f5465a19535 837 Pfam PF13654 AAA domain 26 557 1.8E-201 T 14-10-2018 Tlie_1073 cb5a1e49971341ca35f00f5465a19535 837 Gene3D G3DSA:1.10.8.60 470 555 2.4E-11 T 14-10-2018 Tlie_1073 cb5a1e49971341ca35f00f5465a19535 837 Gene3D G3DSA:3.30.230.10 558 785 3.4E-99 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.6E-48 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 313 82.248 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 SUPERFAMILY SSF53671 4 314 3.27E-106 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 310 1.8E-58 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.1E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 PRINTS PR00102 Ornithine carbamoyltransferase signature 291 302 1.1E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.1E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.1E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 1.1E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 277 300 4.2E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 4.2E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.2E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 274 4.2E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 Gene3D G3DSA:3.40.50.1370 151 299 1.2E-128 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 312 5.3E-136 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tlie_1041 0a0c5d1b2d9b75e557b2cf81f44dd17d 315 Gene3D G3DSA:3.40.50.1370 5 309 1.2E-128 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tlie_1855 9ec4da0e5800e6ed45bd9f7700e59914 470 SMART SM00267 299 465 4.2E-52 T 14-10-2018 IPR000160 GGDEF domain Tlie_1855 9ec4da0e5800e6ed45bd9f7700e59914 470 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 312 464 4.4E-46 T 14-10-2018 IPR000160 GGDEF domain Tlie_1855 9ec4da0e5800e6ed45bd9f7700e59914 470 Gene3D G3DSA:3.30.70.270 310 467 3.6E-53 T 14-10-2018 Tlie_1855 9ec4da0e5800e6ed45bd9f7700e59914 470 SUPERFAMILY SSF55073 315 464 2.88E-44 T 14-10-2018 IPR029787 Nucleotide cyclase Tlie_1855 9ec4da0e5800e6ed45bd9f7700e59914 470 Pfam PF00990 Diguanylate cyclase, GGDEF domain 312 461 3.7E-45 T 14-10-2018 IPR000160 GGDEF domain Tlie_1855 9ec4da0e5800e6ed45bd9f7700e59914 470 Pfam PF05228 CHASE4 domain 65 198 1.4E-17 T 14-10-2018 IPR007892 CHASE4 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 SMART SM00279 174 209 1.6E-13 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 SMART SM00482 607 814 3.3E-81 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 SUPERFAMILY SSF56672 440 848 4.89E-127 T 14-10-2018 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 173 263 1.1E-28 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 PRINTS PR00868 DNA-polymerase family A (pol I) signature 735 746 1.5E-61 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 PRINTS PR00868 DNA-polymerase family A (pol I) signature 676 701 1.5E-61 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 PRINTS PR00868 DNA-polymerase family A (pol I) signature 797 810 1.5E-61 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 PRINTS PR00868 DNA-polymerase family A (pol I) signature 599 614 1.5E-61 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 PRINTS PR00868 DNA-polymerase family A (pol I) signature 767 783 1.5E-61 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 PRINTS PR00868 DNA-polymerase family A (pol I) signature 622 645 1.5E-61 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 PRINTS PR00868 DNA-polymerase family A (pol I) signature 576 598 1.5E-61 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 PRINTS PR00868 DNA-polymerase family A (pol I) signature 713 724 1.5E-61 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 PRINTS PR00868 DNA-polymerase family A (pol I) signature 652 665 1.5E-61 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 Gene3D G3DSA:1.20.1060.10 461 579 1.7E-33 T 14-10-2018 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 Gene3D G3DSA:3.40.50.1010 6 266 6.6E-91 T 14-10-2018 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 Gene3D G3DSA:1.10.150.20 631 774 1.3E-89 T 14-10-2018 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 Gene3D G3DSA:3.30.420.10 306 460 1.4E-8 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 Pfam PF00476 DNA polymerase family A 470 848 6.5E-126 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 Gene3D G3DSA:3.30.70.370 585 845 1.3E-89 T 14-10-2018 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 SUPERFAMILY SSF88723 4 171 1.01E-47 T 14-10-2018 IPR029060 PIN-like domain superfamily Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 SUPERFAMILY SSF47807 173 282 4.19E-29 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 SMART SM00475 3 260 1.8E-116 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 171 3.0E-47 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 Gene3D G3DSA:1.10.150.20 175 247 6.6E-91 T 14-10-2018 Tlie_1197 a7797f9e7831ba23d10e0a3102d9318c 849 ProSitePatterns PS00447 DNA polymerase family A signature. 676 695 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_0997 61fb0303b25bdfda9c09823769749174 270 SUPERFAMILY SSF51351 8 266 1.31E-81 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0997 61fb0303b25bdfda9c09823769749174 270 ProSitePatterns PS00171 Triosephosphate isomerase active site. 182 192 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0997 61fb0303b25bdfda9c09823769749174 270 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 7 266 50.419 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0997 61fb0303b25bdfda9c09823769749174 270 Gene3D G3DSA:3.20.20.70 1 269 2.7E-91 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0997 61fb0303b25bdfda9c09823769749174 270 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 41 257 1.1E-49 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0997 61fb0303b25bdfda9c09823769749174 270 Pfam PF00121 Triosephosphate isomerase 10 263 1.6E-81 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 Gene3D G3DSA:3.30.230.10 325 444 9.8E-19 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 SUPERFAMILY SSF54211 245 441 2.16E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 TIGRFAM TIGR00416 sms: DNA repair protein RadA 3 440 3.0E-145 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 Pfam PF13481 AAA domain 63 212 3.2E-16 T 14-10-2018 Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 SMART SM00382 82 234 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 Hamap MF_01498 DNA repair protein RadA [radA]. 22 444 38.525 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 Pfam PF13541 Subunit ChlI of Mg-chelatase 337 418 6.3E-8 T 14-10-2018 Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 Gene3D G3DSA:3.40.50.300 55 269 3.3E-39 T 14-10-2018 Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 PRINTS PR01874 DNA repair protein radA signature 11 35 7.8E-82 T 14-10-2018 Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 PRINTS PR01874 DNA repair protein radA signature 164 188 7.8E-82 T 14-10-2018 Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 PRINTS PR01874 DNA repair protein radA signature 238 264 7.8E-82 T 14-10-2018 Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 PRINTS PR01874 DNA repair protein radA signature 203 231 7.8E-82 T 14-10-2018 Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 PRINTS PR01874 DNA repair protein radA signature 312 335 7.8E-82 T 14-10-2018 Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 PRINTS PR01874 DNA repair protein radA signature 116 133 7.8E-82 T 14-10-2018 Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 PRINTS PR01874 DNA repair protein radA signature 74 102 7.8E-82 T 14-10-2018 Tlie_0699 ffe9694db722d131094f228dc2b3be84 445 SUPERFAMILY SSF52540 48 260 4.05E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1338 ac98e1bdc7443464e3b0402ba169bdb3 396 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Tlie_1338 ac98e1bdc7443464e3b0402ba169bdb3 396 Gene3D G3DSA:3.90.1150.10 38 386 4.4E-147 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1338 ac98e1bdc7443464e3b0402ba169bdb3 396 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 11 395 6.7E-182 T 14-10-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type Tlie_1338 ac98e1bdc7443464e3b0402ba169bdb3 396 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 26 385 5.5E-132 T 14-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Tlie_1338 ac98e1bdc7443464e3b0402ba169bdb3 396 SUPERFAMILY SSF53383 7 394 7.53E-124 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1338 ac98e1bdc7443464e3b0402ba169bdb3 396 Pfam PF00155 Aminotransferase class I and II 43 384 3.4E-71 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tlie_1338 ac98e1bdc7443464e3b0402ba169bdb3 396 Gene3D G3DSA:3.40.640.10 58 293 4.4E-147 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR00418 DNA topoisomerase II family signature 115 129 2.9E-71 T 14-10-2018 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR00418 DNA topoisomerase II family signature 421 435 2.9E-71 T 14-10-2018 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR00418 DNA topoisomerase II family signature 37 52 2.9E-71 T 14-10-2018 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR00418 DNA topoisomerase II family signature 72 85 2.9E-71 T 14-10-2018 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR00418 DNA topoisomerase II family signature 269 282 2.9E-71 T 14-10-2018 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR00418 DNA topoisomerase II family signature 525 537 2.9E-71 T 14-10-2018 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR00418 DNA topoisomerase II family signature 567 583 2.9E-71 T 14-10-2018 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR00418 DNA topoisomerase II family signature 487 503 2.9E-71 T 14-10-2018 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR00418 DNA topoisomerase II family signature 505 522 2.9E-71 T 14-10-2018 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 563 624 2.4E-29 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 Gene3D G3DSA:3.40.50.670 400 635 8.3E-111 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 Pfam PF01751 Toprim domain 420 531 3.7E-19 T 14-10-2018 IPR006171 TOPRIM domain Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 Gene3D G3DSA:3.30.230.10 221 399 1.8E-67 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 8 635 3.5E-300 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 SMART SM00387 33 177 1.9E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 SUPERFAMILY SSF56719 395 629 3.14E-94 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 5 635 90.87 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 Gene3D G3DSA:3.30.565.10 4 220 5.6E-91 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 175 3.5E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 SMART SM00433 37 628 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 Pfam PF00204 DNA gyrase B 222 391 1.3E-56 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 SUPERFAMILY SSF55874 7 219 3.8E-71 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 SUPERFAMILY SSF54211 222 392 1.71E-55 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR01159 DNA gyrase subunit B signature 197 210 2.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR01159 DNA gyrase subunit B signature 604 620 2.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR01159 DNA gyrase subunit B signature 375 395 2.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR01159 DNA gyrase subunit B signature 313 329 2.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR01159 DNA gyrase subunit B signature 588 600 2.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR01159 DNA gyrase subunit B signature 471 480 2.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR01159 DNA gyrase subunit B signature 8 18 2.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR01159 DNA gyrase subunit B signature 182 197 2.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR01159 DNA gyrase subunit B signature 361 375 2.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tlie_0315 54c2a47093d64eee33a13eac5f1b3fe6 635 PRINTS PR01159 DNA gyrase subunit B signature 221 243 2.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tlie_1632 c2e9dff4c78cc3a18121f4665ac9812d 300 Gene3D G3DSA:3.40.1090.10 1 81 3.4E-23 T 14-10-2018 Tlie_1632 c2e9dff4c78cc3a18121f4665ac9812d 300 Gene3D G3DSA:3.40.1090.10 82 249 4.2E-8 T 14-10-2018 Tlie_1632 c2e9dff4c78cc3a18121f4665ac9812d 300 Pfam PF01734 Patatin-like phospholipase 6 193 8.7E-19 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Tlie_1632 c2e9dff4c78cc3a18121f4665ac9812d 300 SUPERFAMILY SSF52151 2 251 1.46E-44 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Tlie_0936 b658313eae16aba2de567ec4cb6a35c1 557 Gene3D G3DSA:2.30.310.10 5 167 2.8E-23 T 14-10-2018 Tlie_0936 b658313eae16aba2de567ec4cb6a35c1 557 Pfam PF05670 Domain of unknown function (DUF814) 439 525 4.5E-20 T 14-10-2018 IPR008532 Domain of unknown function DUF814 Tlie_0936 b658313eae16aba2de567ec4cb6a35c1 557 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 8 429 1.6E-51 T 14-10-2018 Tlie_1742 e6c7bd7ff31bf85375e424dbe568e5ac 423 Pfam PF07687 Peptidase dimerisation domain 220 308 1.5E-10 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Tlie_1742 e6c7bd7ff31bf85375e424dbe568e5ac 423 Gene3D G3DSA:3.40.630.10 2 287 2.1E-81 T 14-10-2018 Tlie_1742 e6c7bd7ff31bf85375e424dbe568e5ac 423 Gene3D G3DSA:3.40.630.10 288 423 3.7E-13 T 14-10-2018 Tlie_1742 e6c7bd7ff31bf85375e424dbe568e5ac 423 SUPERFAMILY SSF55031 218 321 4.19E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tlie_1742 e6c7bd7ff31bf85375e424dbe568e5ac 423 PIRSF PIRSF005962 1 423 2.5E-111 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Tlie_1742 e6c7bd7ff31bf85375e424dbe568e5ac 423 Pfam PF01546 Peptidase family M20/M25/M40 101 416 5.8E-27 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tlie_1742 e6c7bd7ff31bf85375e424dbe568e5ac 423 SUPERFAMILY SSF53187 3 420 1.01E-61 T 14-10-2018 Tlie_1742 e6c7bd7ff31bf85375e424dbe568e5ac 423 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 6 407 5.9E-91 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Tlie_1332 d5814082b2b80e339013c72283cc8b75 234 SMART SM00382 26 228 3.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1332 d5814082b2b80e339013c72283cc8b75 234 Pfam PF00005 ABC transporter 17 162 1.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1332 d5814082b2b80e339013c72283cc8b75 234 PIRSF PIRSF039137 1 234 3.3E-117 T 14-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 Tlie_1332 d5814082b2b80e339013c72283cc8b75 234 Gene3D G3DSA:3.40.50.300 1 234 2.4E-67 T 14-10-2018 Tlie_1332 d5814082b2b80e339013c72283cc8b75 234 SUPERFAMILY SSF52540 2 232 3.55E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1332 d5814082b2b80e339013c72283cc8b75 234 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0728 a452927040293e22a60ac54f75443583 195 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 10 79 6.4E-30 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Tlie_0728 a452927040293e22a60ac54f75443583 195 Gene3D G3DSA:3.10.20.80 5 78 2.0E-31 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Tlie_0728 a452927040293e22a60ac54f75443583 195 ProSitePatterns PS00938 Initiation factor 3 signature. 61 74 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 Tlie_0728 a452927040293e22a60ac54f75443583 195 Gene3D G3DSA:3.30.110.10 79 174 1.8E-34 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Tlie_0728 a452927040293e22a60ac54f75443583 195 SUPERFAMILY SSF55200 87 172 6.54E-31 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Tlie_0728 a452927040293e22a60ac54f75443583 195 SUPERFAMILY SSF54364 8 81 1.96E-27 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Tlie_0728 a452927040293e22a60ac54f75443583 195 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 2 173 28.736 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Tlie_0728 a452927040293e22a60ac54f75443583 195 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 87 170 2.5E-34 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Tlie_0728 a452927040293e22a60ac54f75443583 195 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 10 171 3.6E-59 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Tlie_0897 c0896d549db7c60bb18b1de9351fd7a1 476 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 4.5E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Tlie_0897 c0896d549db7c60bb18b1de9351fd7a1 476 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 4.5E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Tlie_0897 c0896d549db7c60bb18b1de9351fd7a1 476 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 192 210 4.5E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Tlie_0897 c0896d549db7c60bb18b1de9351fd7a1 476 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 223 244 4.5E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Tlie_0897 c0896d549db7c60bb18b1de9351fd7a1 476 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 473 3.1E-177 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Tlie_0897 c0896d549db7c60bb18b1de9351fd7a1 476 SUPERFAMILY SSF47323 336 473 4.05E-33 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0897 c0896d549db7c60bb18b1de9351fd7a1 476 Pfam PF09190 DALR domain 353 409 2.5E-11 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Tlie_0897 c0896d549db7c60bb18b1de9351fd7a1 476 Gene3D G3DSA:1.20.120.640 308 474 3.0E-37 T 14-10-2018 Tlie_0897 c0896d549db7c60bb18b1de9351fd7a1 476 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 474 39.164 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Tlie_0897 c0896d549db7c60bb18b1de9351fd7a1 476 SMART SM00840 353 415 9.9E-9 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Tlie_0897 c0896d549db7c60bb18b1de9351fd7a1 476 Gene3D G3DSA:3.40.50.620 1 306 3.2E-139 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_0897 c0896d549db7c60bb18b1de9351fd7a1 476 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 19 312 3.2E-135 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Tlie_0897 c0896d549db7c60bb18b1de9351fd7a1 476 SUPERFAMILY SSF52374 5 312 4.1E-103 T 14-10-2018 Tlie_1167 6fc8bd6afbe502511034e60771d543bb 92 Pfam PF00708 Acylphosphatase 7 90 3.9E-26 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tlie_1167 6fc8bd6afbe502511034e60771d543bb 92 PRINTS PR00112 Acylphosphatase signature 5 20 2.5E-6 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tlie_1167 6fc8bd6afbe502511034e60771d543bb 92 PRINTS PR00112 Acylphosphatase signature 26 51 2.5E-6 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tlie_1167 6fc8bd6afbe502511034e60771d543bb 92 Gene3D G3DSA:3.30.70.100 1 92 5.3E-30 T 14-10-2018 Tlie_1167 6fc8bd6afbe502511034e60771d543bb 92 SUPERFAMILY SSF54975 4 91 1.05E-27 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tlie_1167 6fc8bd6afbe502511034e60771d543bb 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tlie_0929 22ef658922f2166de8aa373126b238f0 306 Pfam PF06574 FAD synthetase 2 148 6.0E-35 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Tlie_0929 22ef658922f2166de8aa373126b238f0 306 SMART SM00904 165 290 3.2E-46 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Tlie_0929 22ef658922f2166de8aa373126b238f0 306 PIRSF PIRSF004491 1 297 1.8E-89 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Tlie_0929 22ef658922f2166de8aa373126b238f0 306 SUPERFAMILY SSF52374 2 161 2.85E-24 T 14-10-2018 Tlie_0929 22ef658922f2166de8aa373126b238f0 306 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 4 288 1.6E-63 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Tlie_0929 22ef658922f2166de8aa373126b238f0 306 Gene3D G3DSA:2.40.30.30 168 302 4.6E-40 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Tlie_0929 22ef658922f2166de8aa373126b238f0 306 Pfam PF01687 Riboflavin kinase 166 287 4.7E-34 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Tlie_0929 22ef658922f2166de8aa373126b238f0 306 SUPERFAMILY SSF82114 157 293 2.62E-41 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Tlie_0929 22ef658922f2166de8aa373126b238f0 306 Gene3D G3DSA:3.40.50.620 1 167 1.3E-43 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1305 d0d4b9fd217f1cd6a130fab580b5fccb 318 Gene3D G3DSA:2.40.420.20 248 313 7.8E-8 T 14-10-2018 Tlie_1305 d0d4b9fd217f1cd6a130fab580b5fccb 318 Gene3D G3DSA:2.40.50.100 151 175 7.8E-8 T 14-10-2018 Tlie_1305 d0d4b9fd217f1cd6a130fab580b5fccb 318 Gene3D G3DSA:2.40.30.170 176 247 7.8E-8 T 14-10-2018 Tlie_0980 46682a359ce1bb3bbe7adeb73fe117ac 311 Gene3D G3DSA:3.30.465.10 95 219 3.1E-32 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Tlie_0980 46682a359ce1bb3bbe7adeb73fe117ac 311 Pfam PF01565 FAD binding domain 37 168 5.5E-25 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Tlie_0980 46682a359ce1bb3bbe7adeb73fe117ac 311 SUPERFAMILY SSF56176 17 197 2.7E-40 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Tlie_0980 46682a359ce1bb3bbe7adeb73fe117ac 311 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 311 71.376 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0980 46682a359ce1bb3bbe7adeb73fe117ac 311 SUPERFAMILY SSF56194 202 304 1.83E-29 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0980 46682a359ce1bb3bbe7adeb73fe117ac 311 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 28 303 3.6E-57 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0980 46682a359ce1bb3bbe7adeb73fe117ac 311 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 211 302 2.6E-23 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0980 46682a359ce1bb3bbe7adeb73fe117ac 311 Gene3D G3DSA:3.30.43.10 4 88 3.6E-21 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Tlie_0980 46682a359ce1bb3bbe7adeb73fe117ac 311 Gene3D G3DSA:3.90.78.10 220 306 2.7E-28 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0408 ca4eed521a59da570eb85afdedcc4ed4 199 Gene3D G3DSA:3.40.50.150 5 193 2.3E-33 T 14-10-2018 Tlie_0408 ca4eed521a59da570eb85afdedcc4ed4 199 Pfam PF08241 Methyltransferase domain 44 139 3.4E-20 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Tlie_0408 ca4eed521a59da570eb85afdedcc4ed4 199 SUPERFAMILY SSF53335 6 190 3.95E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_0951 972dbcc6a7ee317dff4e4bc5d0de55c1 369 Gene3D G3DSA:3.50.50.60 158 351 1.8E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0951 972dbcc6a7ee317dff4e4bc5d0de55c1 369 Gene3D G3DSA:3.50.50.60 4 150 3.2E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0951 972dbcc6a7ee317dff4e4bc5d0de55c1 369 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 248 262 9.6E-17 T 14-10-2018 Tlie_0951 972dbcc6a7ee317dff4e4bc5d0de55c1 369 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 183 9.6E-17 T 14-10-2018 Tlie_0951 972dbcc6a7ee317dff4e4bc5d0de55c1 369 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 294 301 9.6E-17 T 14-10-2018 Tlie_0951 972dbcc6a7ee317dff4e4bc5d0de55c1 369 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 9.6E-17 T 14-10-2018 Tlie_0951 972dbcc6a7ee317dff4e4bc5d0de55c1 369 SUPERFAMILY SSF51905 6 323 1.87E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0951 972dbcc6a7ee317dff4e4bc5d0de55c1 369 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 313 3.4E-40 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tlie_0951 972dbcc6a7ee317dff4e4bc5d0de55c1 369 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 279 301 2.2E-24 T 14-10-2018 Tlie_0951 972dbcc6a7ee317dff4e4bc5d0de55c1 369 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 2.2E-24 T 14-10-2018 Tlie_0951 972dbcc6a7ee317dff4e4bc5d0de55c1 369 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 247 263 2.2E-24 T 14-10-2018 Tlie_0951 972dbcc6a7ee317dff4e4bc5d0de55c1 369 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 2.2E-24 T 14-10-2018 Tlie_0951 972dbcc6a7ee317dff4e4bc5d0de55c1 369 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.2E-24 T 14-10-2018 Tlie_1029 2e200da378c81b8beaa781464ebeb870 457 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 122 455 7.4E-75 T 14-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 Tlie_1029 2e200da378c81b8beaa781464ebeb870 457 Pfam PF08486 Stage II sporulation protein 118 207 2.5E-27 T 14-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Tlie_0740 6e0e882ccfab790305aca480487d743d 67 PRINTS PR00050 Cold shock protein signature 5 20 7.8E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tlie_0740 6e0e882ccfab790305aca480487d743d 67 PRINTS PR00050 Cold shock protein signature 40 58 7.8E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tlie_0740 6e0e882ccfab790305aca480487d743d 67 PRINTS PR00050 Cold shock protein signature 25 34 7.8E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tlie_0740 6e0e882ccfab790305aca480487d743d 67 PIRSF PIRSF002599 1 67 1.2E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 Tlie_0740 6e0e882ccfab790305aca480487d743d 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 34 - T 14-10-2018 IPR019844 Cold-shock conserved site Tlie_0740 6e0e882ccfab790305aca480487d743d 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.9E-31 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tlie_0740 6e0e882ccfab790305aca480487d743d 67 SUPERFAMILY SSF50249 3 66 5.14E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0740 6e0e882ccfab790305aca480487d743d 67 Gene3D G3DSA:2.40.50.140 3 66 1.7E-30 T 14-10-2018 Tlie_0740 6e0e882ccfab790305aca480487d743d 67 SMART SM00357 4 67 1.5E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Tlie_1884 b63e92d61a118bdb6c8f2230a31fdb5a 452 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 246 257 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_1884 b63e92d61a118bdb6c8f2230a31fdb5a 452 Pfam PF12801 4Fe-4S binding domain 43 64 180.0 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_1884 b63e92d61a118bdb6c8f2230a31fdb5a 452 Pfam PF12801 4Fe-4S binding domain 172 211 9.2E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_1884 b63e92d61a118bdb6c8f2230a31fdb5a 452 Pfam PF12801 4Fe-4S binding domain 66 110 2.4E-15 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_1884 b63e92d61a118bdb6c8f2230a31fdb5a 452 SUPERFAMILY SSF54862 79 259 2.89E-18 T 14-10-2018 Tlie_1860 9d4d44cfe238d24e689f2a460c2c559a 387 Pfam PF01969 Protein of unknown function DUF111 4 374 2.9E-142 T 14-10-2018 IPR002822 Nickel insertion protein Tlie_1860 9d4d44cfe238d24e689f2a460c2c559a 387 TIGRFAM TIGR00299 TIGR00299: TIGR00299 family protein 3 371 7.3E-121 T 14-10-2018 IPR002822 Nickel insertion protein Tlie_1860 9d4d44cfe238d24e689f2a460c2c559a 387 Hamap MF_01074 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel insertion protein [larC]. 1 385 38.73 T 14-10-2018 IPR002822 Nickel insertion protein Tlie_1860 9d4d44cfe238d24e689f2a460c2c559a 387 Gene3D G3DSA:3.30.70.1380 235 325 1.2E-16 T 14-10-2018 Tlie_1321 b66038ecc8401530d3b8e3f95902abab 148 SUPERFAMILY SSF55653 58 147 4.84E-22 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Tlie_1321 b66038ecc8401530d3b8e3f95902abab 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 1.3E-23 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1321 b66038ecc8401530d3b8e3f95902abab 148 SUPERFAMILY SSF55658 1 57 8.2E-18 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Tlie_1321 b66038ecc8401530d3b8e3f95902abab 148 Gene3D G3DSA:3.10.430.100 63 148 3.0E-23 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Tlie_1321 b66038ecc8401530d3b8e3f95902abab 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1321 b66038ecc8401530d3b8e3f95902abab 148 Gene3D G3DSA:3.40.5.10 1 62 3.9E-24 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1321 b66038ecc8401530d3b8e3f95902abab 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 3.7E-24 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal Tlie_1321 b66038ecc8401530d3b8e3f95902abab 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 2.4E-38 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1321 b66038ecc8401530d3b8e3f95902abab 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.629 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0076 8ec544209e6bd6673e509d220cb624d5 285 Pfam PF02108 Flagellar assembly protein FliH 142 269 9.2E-16 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Tlie_0987 02e4b512bb3d19857a201adf064bfa8a 638 Gene3D G3DSA:2.170.190.11 56 136 8.2E-78 T 14-10-2018 Tlie_0987 02e4b512bb3d19857a201adf064bfa8a 638 SUPERFAMILY SSF63867 337 408 4.25E-6 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_0987 02e4b512bb3d19857a201adf064bfa8a 638 Pfam PF12727 PBP superfamily domain 444 619 7.2E-55 T 14-10-2018 IPR024370 PBP domain Tlie_0987 02e4b512bb3d19857a201adf064bfa8a 638 Gene3D G3DSA:3.40.190.10 500 598 7.0E-8 T 14-10-2018 Tlie_0987 02e4b512bb3d19857a201adf064bfa8a 638 SMART SM00852 175 316 1.0E-26 T 14-10-2018 IPR001453 MoaB/Mog domain Tlie_0987 02e4b512bb3d19857a201adf064bfa8a 638 Gene3D G3DSA:3.90.105.10 40 169 8.2E-78 T 14-10-2018 Tlie_0987 02e4b512bb3d19857a201adf064bfa8a 638 SUPERFAMILY SSF53850 486 634 4.75E-13 T 14-10-2018 Tlie_0987 02e4b512bb3d19857a201adf064bfa8a 638 Pfam PF00994 Probable molybdopterin binding domain 177 314 9.1E-20 T 14-10-2018 IPR001453 MoaB/Mog domain Tlie_0987 02e4b512bb3d19857a201adf064bfa8a 638 Gene3D G3DSA:3.40.980.10 170 314 8.2E-78 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tlie_0987 02e4b512bb3d19857a201adf064bfa8a 638 Pfam PF03453 MoeA N-terminal region (domain I and II) 10 162 3.3E-35 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_0987 02e4b512bb3d19857a201adf064bfa8a 638 Gene3D G3DSA:2.40.340.10 331 407 1.8E-7 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_0987 02e4b512bb3d19857a201adf064bfa8a 638 SUPERFAMILY SSF53218 173 316 1.1E-28 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tlie_0987 02e4b512bb3d19857a201adf064bfa8a 638 SUPERFAMILY SSF63882 9 169 4.06E-38 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 Gene3D G3DSA:3.40.50.300 155 348 9.9E-78 T 14-10-2018 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 SUPERFAMILY SSF52540 553 860 2.06E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 638 656 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 SUPERFAMILY SSF52540 163 552 3.78E-103 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 775 855 2.9E-24 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 97 151 4.6E-11 T 14-10-2018 IPR004176 Clp, N-terminal Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.0E-12 T 14-10-2018 IPR004176 Clp, N-terminal Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 300 312 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 Gene3D G3DSA:1.10.8.60 775 869 1.4E-27 T 14-10-2018 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 SUPERFAMILY SSF81923 4 162 1.96E-39 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 209 322 8.8E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 682 700 1.1E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 608 626 1.1E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 715 729 1.1E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 653 671 1.1E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 Pfam PF07724 AAA domain (Cdc48 subfamily) 603 768 7.2E-57 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 Gene3D G3DSA:3.40.50.300 557 773 1.0E-88 T 14-10-2018 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 SMART SM00382 604 761 7.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 SMART SM00382 204 348 8.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 Gene3D G3DSA:1.10.1780.10 1 154 1.4E-35 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 Gene3D G3DSA:3.40.50.300 349 551 3.5E-73 T 14-10-2018 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 864 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 Tlie_1599 2ff6aaf305ee87081f477482f313198d 870 SMART SM01086 775 864 1.2E-33 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 SUPERFAMILY SSF53223 1 122 5.37E-43 T 14-10-2018 Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 Gene3D G3DSA:3.40.50.10860 8 275 2.9E-122 T 14-10-2018 Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 SUPERFAMILY SSF51735 123 280 1.57E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 280 8.6E-75 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 Gene3D G3DSA:3.40.50.720 6 258 2.9E-122 T 14-10-2018 Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 41.477 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 1.1E-43 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 2.6E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 2.6E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 2.6E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 2.6E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 2.6E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 2.6E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tlie_1721 1f9a36d36d94627e705a0ae02e3f778f 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 2.6E-88 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tlie_1562 852593798b7bb79b2ed01a05cbb28da3 426 PRINTS PR00415 Aconitase family signature 114 127 7.5E-16 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1562 852593798b7bb79b2ed01a05cbb28da3 426 PRINTS PR00415 Aconitase family signature 190 203 7.5E-16 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1562 852593798b7bb79b2ed01a05cbb28da3 426 PRINTS PR00415 Aconitase family signature 300 311 7.5E-16 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1562 852593798b7bb79b2ed01a05cbb28da3 426 PRINTS PR00415 Aconitase family signature 128 143 7.5E-16 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1562 852593798b7bb79b2ed01a05cbb28da3 426 PRINTS PR00415 Aconitase family signature 204 217 7.5E-16 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1562 852593798b7bb79b2ed01a05cbb28da3 426 PRINTS PR00415 Aconitase family signature 358 371 7.5E-16 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1562 852593798b7bb79b2ed01a05cbb28da3 426 SUPERFAMILY SSF53732 1 424 1.44E-108 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Tlie_1562 852593798b7bb79b2ed01a05cbb28da3 426 Pfam PF00330 Aconitase family (aconitate hydratase) 74 416 4.0E-77 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1562 852593798b7bb79b2ed01a05cbb28da3 426 Gene3D G3DSA:3.30.499.20 4 274 2.9E-83 T 14-10-2018 Tlie_1562 852593798b7bb79b2ed01a05cbb28da3 426 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 423 7.3E-131 T 14-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Tlie_1562 852593798b7bb79b2ed01a05cbb28da3 426 Gene3D G3DSA:3.30.499.10 277 426 8.4E-48 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Tlie_1562 852593798b7bb79b2ed01a05cbb28da3 426 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 422 1.5E-133 T 14-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 ProSitePatterns PS00163 Fumarate lyases signature. 273 282 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 Hamap MF_00006 Argininosuccinate lyase [argH]. 1 451 39.725 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 PRINTS PR00145 Argininosuccinate lyase family signature 273 289 1.3E-55 T 14-10-2018 Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 PRINTS PR00145 Argininosuccinate lyase family signature 140 160 1.3E-55 T 14-10-2018 Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 PRINTS PR00145 Argininosuccinate lyase family signature 191 207 1.3E-55 T 14-10-2018 Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 PRINTS PR00145 Argininosuccinate lyase family signature 99 121 1.3E-55 T 14-10-2018 Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 PRINTS PR00145 Argininosuccinate lyase family signature 229 253 1.3E-55 T 14-10-2018 Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 PRINTS PR00145 Argininosuccinate lyase family signature 308 327 1.3E-55 T 14-10-2018 Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 Pfam PF14698 Argininosuccinate lyase C-terminal 361 429 2.2E-21 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 SUPERFAMILY SSF48557 4 456 2.36E-133 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 Gene3D G3DSA:1.20.200.10 117 446 2.0E-175 T 14-10-2018 Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 Gene3D G3DSA:1.10.275.10 23 227 2.0E-175 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 Pfam PF00206 Lyase 4 298 6.3E-62 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 TIGRFAM TIGR00838 argH: argininosuccinate lyase 1 448 9.2E-170 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 PRINTS PR00149 Fumarate lyase superfamily signature 100 118 1.1E-25 T 14-10-2018 IPR000362 Fumarate lyase family Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 PRINTS PR00149 Fumarate lyase superfamily signature 145 163 1.1E-25 T 14-10-2018 IPR000362 Fumarate lyase family Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 PRINTS PR00149 Fumarate lyase superfamily signature 229 256 1.1E-25 T 14-10-2018 IPR000362 Fumarate lyase family Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 PRINTS PR00149 Fumarate lyase superfamily signature 273 289 1.1E-25 T 14-10-2018 IPR000362 Fumarate lyase family Tlie_0540 1e0020579615118b34d81565dbe39ebe 469 Gene3D G3DSA:1.10.40.30 358 430 2.0E-175 T 14-10-2018 Tlie_1772 c48f100d8d8b7144ef0e70be6b445460 290 Gene3D G3DSA:3.40.50.620 136 282 1.8E-21 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1772 c48f100d8d8b7144ef0e70be6b445460 290 SUPERFAMILY SSF52402 3 130 2.76E-14 T 14-10-2018 Tlie_1772 c48f100d8d8b7144ef0e70be6b445460 290 Gene3D G3DSA:3.40.50.620 1 135 6.4E-20 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1772 c48f100d8d8b7144ef0e70be6b445460 290 Pfam PF00582 Universal stress protein family 1 128 1.1E-7 T 14-10-2018 IPR006016 UspA Tlie_1772 c48f100d8d8b7144ef0e70be6b445460 290 Pfam PF00582 Universal stress protein family 140 281 2.6E-17 T 14-10-2018 IPR006016 UspA Tlie_1772 c48f100d8d8b7144ef0e70be6b445460 290 PRINTS PR01438 Universal stress protein signature 139 157 5.5E-7 T 14-10-2018 IPR006015 Universal stress protein A Tlie_1772 c48f100d8d8b7144ef0e70be6b445460 290 PRINTS PR01438 Universal stress protein signature 241 253 5.5E-7 T 14-10-2018 IPR006015 Universal stress protein A Tlie_1772 c48f100d8d8b7144ef0e70be6b445460 290 PRINTS PR01438 Universal stress protein signature 259 281 5.5E-7 T 14-10-2018 IPR006015 Universal stress protein A Tlie_1772 c48f100d8d8b7144ef0e70be6b445460 290 SUPERFAMILY SSF52402 140 281 6.53E-20 T 14-10-2018 Tlie_0335 ad6b485ec3e48c4b7921d50f3ad72de5 539 Gene3D G3DSA:3.20.20.140 63 487 5.3E-126 T 14-10-2018 Tlie_0335 ad6b485ec3e48c4b7921d50f3ad72de5 539 SUPERFAMILY SSF51556 62 487 3.4E-30 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tlie_0335 ad6b485ec3e48c4b7921d50f3ad72de5 539 SUPERFAMILY SSF51338 5 73 2.66E-8 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tlie_0335 ad6b485ec3e48c4b7921d50f3ad72de5 539 Gene3D G3DSA:3.10.310.70 81 199 5.3E-126 T 14-10-2018 Tlie_0335 ad6b485ec3e48c4b7921d50f3ad72de5 539 Pfam PF07969 Amidohydrolase family 54 526 1.1E-91 T 14-10-2018 IPR013108 Amidohydrolase 3 Tlie_0335 ad6b485ec3e48c4b7921d50f3ad72de5 539 Gene3D G3DSA:2.30.40.10 8 501 5.3E-126 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tlie_0361 162bf3deddb666b1e387b42ba9b15e0b 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 157 1.1E-48 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tlie_0361 162bf3deddb666b1e387b42ba9b15e0b 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 3 320 35.13 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tlie_0361 162bf3deddb666b1e387b42ba9b15e0b 339 SUPERFAMILY SSF51735 5 176 5.3E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0361 162bf3deddb666b1e387b42ba9b15e0b 339 SUPERFAMILY SSF48179 177 329 8.33E-53 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tlie_0361 162bf3deddb666b1e387b42ba9b15e0b 339 Gene3D G3DSA:1.10.1040.10 187 334 1.1E-49 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Tlie_0361 162bf3deddb666b1e387b42ba9b15e0b 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 57 84 2.9E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tlie_0361 162bf3deddb666b1e387b42ba9b15e0b 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 236 253 2.9E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tlie_0361 162bf3deddb666b1e387b42ba9b15e0b 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 7 24 2.9E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tlie_0361 162bf3deddb666b1e387b42ba9b15e0b 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 131 151 2.9E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tlie_0361 162bf3deddb666b1e387b42ba9b15e0b 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 171 195 2.9E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tlie_0361 162bf3deddb666b1e387b42ba9b15e0b 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 196 220 2.9E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tlie_0361 162bf3deddb666b1e387b42ba9b15e0b 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 178 317 8.2E-51 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tlie_0361 162bf3deddb666b1e387b42ba9b15e0b 339 Gene3D G3DSA:3.40.50.720 1 185 1.0E-62 T 14-10-2018 Tlie_0361 162bf3deddb666b1e387b42ba9b15e0b 339 PIRSF PIRSF000114 1 330 6.1E-102 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tlie_0826 18b4e3d15c53f051a61403c42578621e 353 SUPERFAMILY SSF52374 156 335 1.3E-23 T 14-10-2018 Tlie_0826 18b4e3d15c53f051a61403c42578621e 353 SMART SM00764 150 334 4.1E-92 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 Tlie_0826 18b4e3d15c53f051a61403c42578621e 353 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 18 335 1.3E-88 T 14-10-2018 IPR005216 Citrate lyase ligase GO:0008771 Tlie_0826 18b4e3d15c53f051a61403c42578621e 353 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 151 334 5.0E-52 T 14-10-2018 Tlie_0826 18b4e3d15c53f051a61403c42578621e 353 PIRSF PIRSF005751 6 351 4.1E-107 T 14-10-2018 IPR005216 Citrate lyase ligase GO:0008771 Tlie_0826 18b4e3d15c53f051a61403c42578621e 353 Pfam PF08218 Citrate lyase ligase C-terminal domain 151 334 3.1E-70 T 14-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 Tlie_0826 18b4e3d15c53f051a61403c42578621e 353 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 158 207 2.4E-7 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Tlie_0826 18b4e3d15c53f051a61403c42578621e 353 Gene3D G3DSA:3.40.50.620 156 350 7.0E-22 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_0826 18b4e3d15c53f051a61403c42578621e 353 SUPERFAMILY SSF55729 11 137 3.61E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tlie_0826 18b4e3d15c53f051a61403c42578621e 353 Gene3D G3DSA:3.40.630.30 3 143 3.0E-5 T 14-10-2018 Tlie_1162 926175183d3a8cee4030dce0b37432e0 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 374 1.3E-119 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Tlie_1162 926175183d3a8cee4030dce0b37432e0 385 Gene3D G3DSA:3.40.50.1970 2 187 2.8E-61 T 14-10-2018 Tlie_1162 926175183d3a8cee4030dce0b37432e0 385 Gene3D G3DSA:1.20.1090.10 189 383 2.7E-62 T 14-10-2018 Tlie_1162 926175183d3a8cee4030dce0b37432e0 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 176 204 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Tlie_1162 926175183d3a8cee4030dce0b37432e0 385 SUPERFAMILY SSF56796 4 382 4.06E-123 T 14-10-2018 Tlie_0560 eef4c99c486904bce9182e8a1be4ea9a 335 Gene3D G3DSA:3.10.580.10 207 332 2.0E-47 T 14-10-2018 Tlie_0560 eef4c99c486904bce9182e8a1be4ea9a 335 Pfam PF01380 SIS domain 53 181 1.1E-27 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Tlie_0560 eef4c99c486904bce9182e8a1be4ea9a 335 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 56 325 3.5E-94 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Tlie_0560 eef4c99c486904bce9182e8a1be4ea9a 335 Pfam PF00571 CBS domain 221 269 1.7E-8 T 14-10-2018 IPR000644 CBS domain Tlie_0560 eef4c99c486904bce9182e8a1be4ea9a 335 Pfam PF00571 CBS domain 281 332 3.7E-9 T 14-10-2018 IPR000644 CBS domain Tlie_0560 eef4c99c486904bce9182e8a1be4ea9a 335 Gene3D G3DSA:3.40.50.10490 14 206 7.9E-62 T 14-10-2018 Tlie_0560 eef4c99c486904bce9182e8a1be4ea9a 335 PIRSF PIRSF004692 7 335 2.9E-125 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Tlie_0560 eef4c99c486904bce9182e8a1be4ea9a 335 SUPERFAMILY SSF53697 19 335 9.79E-62 T 14-10-2018 Tlie_0560 eef4c99c486904bce9182e8a1be4ea9a 335 SMART SM00116 287 334 1.1E-4 T 14-10-2018 IPR000644 CBS domain Tlie_0560 eef4c99c486904bce9182e8a1be4ea9a 335 SMART SM00116 221 269 1.3E-4 T 14-10-2018 IPR000644 CBS domain Tlie_1099 5075ffb064d5f372d998642315c4ac9b 414 PIRSF PIRSF000447 1 414 2.9E-167 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Tlie_1099 5075ffb064d5f372d998642315c4ac9b 414 Gene3D G3DSA:3.40.47.10 1 253 4.5E-95 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Tlie_1099 5075ffb064d5f372d998642315c4ac9b 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 367 6.3E-36 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Tlie_1099 5075ffb064d5f372d998642315c4ac9b 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Tlie_1099 5075ffb064d5f372d998642315c4ac9b 414 SMART SM00825 Beta-ketoacyl synthase 4 414 5.1E-14 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Tlie_1099 5075ffb064d5f372d998642315c4ac9b 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 245 6.2E-59 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Tlie_1099 5075ffb064d5f372d998642315c4ac9b 414 SUPERFAMILY SSF53901 212 412 1.08E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Tlie_1099 5075ffb064d5f372d998642315c4ac9b 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 409 8.4E-176 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Tlie_1099 5075ffb064d5f372d998642315c4ac9b 414 Gene3D G3DSA:3.40.47.10 255 401 1.4E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Tlie_1099 5075ffb064d5f372d998642315c4ac9b 414 SUPERFAMILY SSF53901 2 250 4.39E-78 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Tlie_0650 53bc74c2928f9add37bb1cec09b3c169 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.3E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0650 53bc74c2928f9add37bb1cec09b3c169 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.3E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0650 53bc74c2928f9add37bb1cec09b3c169 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.3E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0650 53bc74c2928f9add37bb1cec09b3c169 93 PIRSF PIRSF002144 1 93 3.2E-34 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0650 53bc74c2928f9add37bb1cec09b3c169 93 Gene3D G3DSA:3.30.860.10 1 93 2.3E-40 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0650 53bc74c2928f9add37bb1cec09b3c169 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 90 6.9E-46 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Tlie_0650 53bc74c2928f9add37bb1cec09b3c169 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.932 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0650 53bc74c2928f9add37bb1cec09b3c169 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0650 53bc74c2928f9add37bb1cec09b3c169 93 SUPERFAMILY SSF54570 3 84 6.8E-36 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0650 53bc74c2928f9add37bb1cec09b3c169 93 Pfam PF00203 Ribosomal protein S19 3 83 5.4E-37 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_1801 28d546a819c1cad2a4b0544aac97e98e 189 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 2 184 2.6E-74 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tlie_1801 28d546a819c1cad2a4b0544aac97e98e 189 SUPERFAMILY SSF52317 3 187 2.44E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_1801 28d546a819c1cad2a4b0544aac97e98e 189 PIRSF PIRSF005639 1 189 5.6E-69 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tlie_1801 28d546a819c1cad2a4b0544aac97e98e 189 Gene3D G3DSA:3.40.50.880 1 189 6.4E-66 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_1801 28d546a819c1cad2a4b0544aac97e98e 189 Pfam PF01174 SNO glutamine amidotransferase family 5 185 3.2E-62 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tlie_1801 28d546a819c1cad2a4b0544aac97e98e 189 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 3 185 35.692 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tlie_0410 368ea1ce8a28eb56ee150ca0f672a998 426 PIRSF PIRSF006054 1 423 3.3E-113 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 Tlie_0410 368ea1ce8a28eb56ee150ca0f672a998 426 Pfam PF03313 Serine dehydratase alpha chain 138 417 1.4E-48 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Tlie_0410 368ea1ce8a28eb56ee150ca0f672a998 426 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 1 422 32.095 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 Tlie_0739 bb0a564ecb08ef32c8001523b77d630e 246 Gene3D G3DSA:3.40.50.1860 113 226 1.0E-6 T 14-10-2018 Tlie_0739 bb0a564ecb08ef32c8001523b77d630e 246 Gene3D G3DSA:3.40.50.1860 57 112 1.0E-6 T 14-10-2018 Tlie_0362 7c30ae3595a3b0acb2d4194cb58868d3 598 SUPERFAMILY SSF55073 444 592 4.87E-41 T 14-10-2018 IPR029787 Nucleotide cyclase Tlie_0362 7c30ae3595a3b0acb2d4194cb58868d3 598 SUPERFAMILY SSF55781 167 311 3.05E-5 T 14-10-2018 Tlie_0362 7c30ae3595a3b0acb2d4194cb58868d3 598 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 437 593 3.2E-44 T 14-10-2018 IPR000160 GGDEF domain Tlie_0362 7c30ae3595a3b0acb2d4194cb58868d3 598 Gene3D G3DSA:3.30.70.270 433 597 2.0E-48 T 14-10-2018 Tlie_0362 7c30ae3595a3b0acb2d4194cb58868d3 598 SMART SM00267 429 597 1.1E-39 T 14-10-2018 IPR000160 GGDEF domain Tlie_0362 7c30ae3595a3b0acb2d4194cb58868d3 598 Pfam PF00990 Diguanylate cyclase, GGDEF domain 440 592 1.6E-41 T 14-10-2018 IPR000160 GGDEF domain Tlie_0362 7c30ae3595a3b0acb2d4194cb58868d3 598 SUPERFAMILY SSF55781 24 157 3.34E-7 T 14-10-2018 Tlie_0362 7c30ae3595a3b0acb2d4194cb58868d3 598 Gene3D G3DSA:3.30.450.40 6 159 4.7E-5 T 14-10-2018 IPR029016 GAF-like domain superfamily Tlie_0362 7c30ae3595a3b0acb2d4194cb58868d3 598 SUPERFAMILY SSF55781 287 423 4.14E-5 T 14-10-2018 Tlie_1446 bfe024a794dc0c91ec1968f840af594a 613 Gene3D G3DSA:1.10.569.10 240 425 1.3E-129 T 14-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Tlie_1446 bfe024a794dc0c91ec1968f840af594a 613 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 234 604 2.6E-119 T 14-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1446 bfe024a794dc0c91ec1968f840af594a 613 SUPERFAMILY SSF48310 215 607 6.15E-108 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1446 bfe024a794dc0c91ec1968f840af594a 613 Gene3D G3DSA:3.60.9.10 1 211 2.6E-77 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_1446 bfe024a794dc0c91ec1968f840af594a 613 SUPERFAMILY SSF56228 1 211 2.22E-67 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_1446 bfe024a794dc0c91ec1968f840af594a 613 SMART SM00790 4 208 2.5E-97 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1446 bfe024a794dc0c91ec1968f840af594a 613 Gene3D G3DSA:1.10.599.10 239 604 1.3E-129 T 14-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Tlie_1446 bfe024a794dc0c91ec1968f840af594a 613 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 6 206 2.3E-73 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1173 e936ef183cd8a181ccd91ed4a6a4d57a 296 Pfam PF03091 CutA1 divalent ion tolerance protein 200 292 9.6E-25 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 Tlie_1173 e936ef183cd8a181ccd91ed4a6a4d57a 296 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 182 1.7E-26 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Tlie_1173 e936ef183cd8a181ccd91ed4a6a4d57a 296 SUPERFAMILY SSF54913 199 294 8.53E-26 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Tlie_1173 e936ef183cd8a181ccd91ed4a6a4d57a 296 Gene3D G3DSA:3.40.50.300 1 194 2.0E-47 T 14-10-2018 Tlie_1173 e936ef183cd8a181ccd91ed4a6a4d57a 296 SUPERFAMILY SSF52540 1 186 3.06E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1173 e936ef183cd8a181ccd91ed4a6a4d57a 296 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 192 19.852 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Tlie_1173 e936ef183cd8a181ccd91ed4a6a4d57a 296 Pfam PF01121 Dephospho-CoA kinase 3 176 3.4E-32 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Tlie_1173 e936ef183cd8a181ccd91ed4a6a4d57a 296 Gene3D G3DSA:3.30.70.120 195 296 1.9E-26 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tlie_0928 9f70caac774075c1268a5600fc03a062 312 Gene3D G3DSA:3.30.2350.10 1 235 4.6E-72 T 14-10-2018 Tlie_0928 9f70caac774075c1268a5600fc03a062 312 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 3 214 6.6E-61 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0928 9f70caac774075c1268a5600fc03a062 312 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 175 2.4E-44 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Tlie_0928 9f70caac774075c1268a5600fc03a062 312 SUPERFAMILY SSF55120 2 219 2.24E-62 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0928 9f70caac774075c1268a5600fc03a062 312 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 176 216 5.9E-12 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Tlie_0928 9f70caac774075c1268a5600fc03a062 312 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 299 15.083 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0251 e6bc2f54f06e65088ef728ae4963f250 266 Gene3D G3DSA:3.30.360.10 129 232 5.0E-49 T 14-10-2018 Tlie_0251 e6bc2f54f06e65088ef728ae4963f250 266 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 130 256 3.0E-25 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tlie_0251 e6bc2f54f06e65088ef728ae4963f250 266 SUPERFAMILY SSF55347 129 229 2.4E-9 T 14-10-2018 Tlie_0251 e6bc2f54f06e65088ef728ae4963f250 266 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 126 2.1E-22 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tlie_0251 e6bc2f54f06e65088ef728ae4963f250 266 SUPERFAMILY SSF51735 1 152 8.4E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0251 e6bc2f54f06e65088ef728ae4963f250 266 PIRSF PIRSF000161 1 266 2.6E-40 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tlie_0251 e6bc2f54f06e65088ef728ae4963f250 266 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 256 2.0E-39 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tlie_0251 e6bc2f54f06e65088ef728ae4963f250 266 Gene3D G3DSA:3.40.50.720 5 256 5.0E-49 T 14-10-2018 Tlie_0888 e9f3478bb53cd8648b7d2d532aedc3a2 277 SUPERFAMILY SSF53167 2 275 7.37E-91 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Tlie_0888 e9f3478bb53cd8648b7d2d532aedc3a2 277 Gene3D G3DSA:3.40.50.1580 1 272 2.0E-108 T 14-10-2018 Tlie_0888 e9f3478bb53cd8648b7d2d532aedc3a2 277 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 25 270 7.2E-97 T 14-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Tlie_0888 e9f3478bb53cd8648b7d2d532aedc3a2 277 PIRSF PIRSF000477 1 272 1.4E-103 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Tlie_0888 e9f3478bb53cd8648b7d2d532aedc3a2 277 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 25 269 2.2E-97 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Tlie_0888 e9f3478bb53cd8648b7d2d532aedc3a2 277 Pfam PF01048 Phosphorylase superfamily 23 269 9.5E-50 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Tlie_1718 fdeb2c45a2805ec5fcda7b8e11e7ed67 585 Gene3D G3DSA:3.40.50.1220 202 368 3.6E-40 T 14-10-2018 Tlie_1718 fdeb2c45a2805ec5fcda7b8e11e7ed67 585 Gene3D G3DSA:3.40.50.970 9 195 3.0E-51 T 14-10-2018 Tlie_1718 fdeb2c45a2805ec5fcda7b8e11e7ed67 585 SUPERFAMILY SSF52518 15 187 2.26E-45 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1718 fdeb2c45a2805ec5fcda7b8e11e7ed67 585 SUPERFAMILY SSF52467 168 370 2.5E-39 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Tlie_1718 fdeb2c45a2805ec5fcda7b8e11e7ed67 585 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 209 345 3.7E-31 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Tlie_1718 fdeb2c45a2805ec5fcda7b8e11e7ed67 585 SUPERFAMILY SSF52518 382 572 6.08E-44 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1718 fdeb2c45a2805ec5fcda7b8e11e7ed67 585 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 447 466 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Tlie_1718 fdeb2c45a2805ec5fcda7b8e11e7ed67 585 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 17 184 3.1E-49 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Tlie_1718 fdeb2c45a2805ec5fcda7b8e11e7ed67 585 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 416 555 3.2E-27 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tlie_1718 fdeb2c45a2805ec5fcda7b8e11e7ed67 585 Gene3D G3DSA:3.40.50.970 369 574 1.5E-44 T 14-10-2018 Tlie_1660 ae3b3d6634db9304127c03fde05909b5 383 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 220 233 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Tlie_1660 ae3b3d6634db9304127c03fde05909b5 383 Gene3D G3DSA:3.90.1150.10 15 363 1.9E-121 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1660 ae3b3d6634db9304127c03fde05909b5 383 Gene3D G3DSA:3.40.640.10 56 272 1.9E-121 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1660 ae3b3d6634db9304127c03fde05909b5 383 SUPERFAMILY SSF53383 48 371 1.58E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1660 ae3b3d6634db9304127c03fde05909b5 383 Pfam PF00155 Aminotransferase class I and II 49 363 3.7E-46 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tlie_0553 0589fb21e3af8666576041894f71f202 267 Gene3D G3DSA:3.40.50.20 2 130 2.8E-13 T 14-10-2018 Tlie_0553 0589fb21e3af8666576041894f71f202 267 Pfam PF06230 Protein of unknown function (DUF1009) 60 264 2.5E-67 T 14-10-2018 IPR010415 Protein of unknown function DUF1009 KEGG: 00540+3.6.1.54 Tlie_0553 0589fb21e3af8666576041894f71f202 267 Gene3D G3DSA:3.40.140.80 131 267 4.0E-47 T 14-10-2018 Tlie_0433 851b3106c48e79173607fb11741224f0 450 Gene3D G3DSA:1.10.357.20 271 449 1.5E-54 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Tlie_0433 851b3106c48e79173607fb11741224f0 450 SUPERFAMILY SSF161093 278 448 3.53E-46 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Tlie_0433 851b3106c48e79173607fb11741224f0 450 Pfam PF01769 Divalent cation transporter 320 441 2.2E-28 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Tlie_0433 851b3106c48e79173607fb11741224f0 450 Pfam PF00571 CBS domain 201 252 4.5E-12 T 14-10-2018 IPR000644 CBS domain Tlie_0433 851b3106c48e79173607fb11741224f0 450 Pfam PF00571 CBS domain 134 192 2.1E-6 T 14-10-2018 IPR000644 CBS domain Tlie_0433 851b3106c48e79173607fb11741224f0 450 Gene3D G3DSA:1.25.60.10 4 129 1.2E-30 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily Tlie_0433 851b3106c48e79173607fb11741224f0 450 Pfam PF03448 MgtE intracellular N domain 31 130 4.3E-28 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Tlie_0433 851b3106c48e79173607fb11741224f0 450 SUPERFAMILY SSF54631 133 273 3.41E-37 T 14-10-2018 Tlie_0433 851b3106c48e79173607fb11741224f0 450 SMART SM00924 31 134 5.8E-33 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Tlie_0433 851b3106c48e79173607fb11741224f0 450 TIGRFAM TIGR00400 mgtE: magnesium transporter 10 449 6.8E-152 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 Tlie_0433 851b3106c48e79173607fb11741224f0 450 SUPERFAMILY SSF158791 8 130 5.36E-30 T 14-10-2018 Tlie_0433 851b3106c48e79173607fb11741224f0 450 Gene3D G3DSA:3.10.580.10 132 258 2.6E-47 T 14-10-2018 Tlie_0433 851b3106c48e79173607fb11741224f0 450 SMART SM00116 141 194 5.8 T 14-10-2018 IPR000644 CBS domain Tlie_0433 851b3106c48e79173607fb11741224f0 450 SMART SM00116 205 253 7.3E-12 T 14-10-2018 IPR000644 CBS domain Tlie_1699 3d3a4195bbbee91ef4125ee0ba484844 463 Gene3D G3DSA:3.90.1150.10 20 440 1.5E-140 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1699 3d3a4195bbbee91ef4125ee0ba484844 463 Gene3D G3DSA:3.40.640.10 73 342 1.5E-140 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1699 3d3a4195bbbee91ef4125ee0ba484844 463 SUPERFAMILY SSF53383 34 445 9.94E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1699 3d3a4195bbbee91ef4125ee0ba484844 463 PIRSF PIRSF000521 19 144 3.8E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tlie_1699 3d3a4195bbbee91ef4125ee0ba484844 463 PIRSF PIRSF000521 137 447 6.8E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tlie_1699 3d3a4195bbbee91ef4125ee0ba484844 463 Pfam PF00202 Aminotransferase class-III 37 441 2.8E-107 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tlie_0367 6437b64516fd34fee4103ad7acd74ba0 306 Gene3D G3DSA:3.40.50.1100 45 146 2.3E-113 T 14-10-2018 Tlie_0367 6437b64516fd34fee4103ad7acd74ba0 306 TIGRFAM TIGR01136 cysKM: cysteine synthase 11 305 1.2E-116 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Tlie_0367 6437b64516fd34fee4103ad7acd74ba0 306 Gene3D G3DSA:3.40.50.1100 12 301 2.3E-113 T 14-10-2018 Tlie_0367 6437b64516fd34fee4103ad7acd74ba0 306 SUPERFAMILY SSF53686 10 304 6.42E-95 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tlie_0367 6437b64516fd34fee4103ad7acd74ba0 306 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 35 48 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Tlie_0367 6437b64516fd34fee4103ad7acd74ba0 306 TIGRFAM TIGR01139 cysK: cysteine synthase A 11 304 1.4E-118 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Tlie_0367 6437b64516fd34fee4103ad7acd74ba0 306 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 12 293 1.7E-63 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tlie_1747 9f3cf2c923429c3a614f322d837a7ca7 531 Pfam PF00005 ABC transporter 292 451 1.6E-12 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1747 9f3cf2c923429c3a614f322d837a7ca7 531 SMART SM00382 300 512 2.4 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1747 9f3cf2c923429c3a614f322d837a7ca7 531 SMART SM00382 30 236 1.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1747 9f3cf2c923429c3a614f322d837a7ca7 531 ProSitePatterns PS00211 ABC transporters family signature. 424 438 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_1747 9f3cf2c923429c3a614f322d837a7ca7 531 Gene3D G3DSA:3.40.50.300 2 255 6.2E-51 T 14-10-2018 Tlie_1747 9f3cf2c923429c3a614f322d837a7ca7 531 SUPERFAMILY SSF52540 4 243 3.97E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1747 9f3cf2c923429c3a614f322d837a7ca7 531 Gene3D G3DSA:3.40.50.300 272 515 2.9E-37 T 14-10-2018 Tlie_1747 9f3cf2c923429c3a614f322d837a7ca7 531 SUPERFAMILY SSF52540 279 509 1.19E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1747 9f3cf2c923429c3a614f322d837a7ca7 531 Pfam PF00005 ABC transporter 21 187 7.5E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0921 bc989f36d5f848b33b6a4fa3dcccd678 174 Pfam PF02576 RimP N-terminal domain 13 85 1.4E-21 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Tlie_0921 bc989f36d5f848b33b6a4fa3dcccd678 174 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 11 154 21.471 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Tlie_0921 bc989f36d5f848b33b6a4fa3dcccd678 174 SUPERFAMILY SSF74942 86 153 8.37E-13 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Tlie_0921 bc989f36d5f848b33b6a4fa3dcccd678 174 Gene3D G3DSA:3.30.300.70 5 82 3.2E-20 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily Tlie_0921 bc989f36d5f848b33b6a4fa3dcccd678 174 Pfam PF17384 RimP C-terminal SH3 domain 88 153 4.0E-12 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Tlie_0921 bc989f36d5f848b33b6a4fa3dcccd678 174 SUPERFAMILY SSF75420 10 85 7.32E-18 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily Tlie_0309 923cdab0b03cfa39e602c3f1dd6532bf 461 Pfam PF01134 Glucose inhibited division protein A 393 460 2.2E-4 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Tlie_0309 923cdab0b03cfa39e602c3f1dd6532bf 461 Gene3D G3DSA:3.50.50.60 398 461 1.0E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0309 923cdab0b03cfa39e602c3f1dd6532bf 461 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 44 2.6E-7 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tlie_0309 923cdab0b03cfa39e602c3f1dd6532bf 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.0E-7 T 14-10-2018 Tlie_0309 923cdab0b03cfa39e602c3f1dd6532bf 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 414 436 2.0E-7 T 14-10-2018 Tlie_0309 923cdab0b03cfa39e602c3f1dd6532bf 461 SUPERFAMILY SSF51905 1 460 2.57E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0309 923cdab0b03cfa39e602c3f1dd6532bf 461 PIRSF PIRSF038984 2 106 2.8E-16 T 14-10-2018 IPR028348 FAD dependent protein Tlie_0309 923cdab0b03cfa39e602c3f1dd6532bf 461 PIRSF PIRSF038984 126 461 1.1E-28 T 14-10-2018 IPR028348 FAD dependent protein Tlie_0309 923cdab0b03cfa39e602c3f1dd6532bf 461 Gene3D G3DSA:3.50.50.60 1 100 2.1E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0309 923cdab0b03cfa39e602c3f1dd6532bf 461 Gene3D G3DSA:3.50.50.60 123 229 1.4E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1012 4017450c2f7ffac03d28ac4abdcb7d48 77 Gene3D G3DSA:1.10.287.1040 1 75 5.6E-19 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 Tlie_1012 4017450c2f7ffac03d28ac4abdcb7d48 77 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 3 42 1.0E-5 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Tlie_1012 4017450c2f7ffac03d28ac4abdcb7d48 77 PIRSF PIRSF006488 1 74 3.8E-19 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Tlie_1012 4017450c2f7ffac03d28ac4abdcb7d48 77 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 2 58 6.7E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Tlie_1012 4017450c2f7ffac03d28ac4abdcb7d48 77 Pfam PF02609 Exonuclease VII small subunit 3 53 5.1E-19 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Tlie_1012 4017450c2f7ffac03d28ac4abdcb7d48 77 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 2 62 13.701 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Tlie_1012 4017450c2f7ffac03d28ac4abdcb7d48 77 SUPERFAMILY SSF116842 1 64 2.09E-17 T 14-10-2018 Tlie_0678 727f648ad5ef6edd64ab6ff20f2b3bb0 280 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0678 727f648ad5ef6edd64ab6ff20f2b3bb0 280 SUPERFAMILY SSF52540 3 232 2.15E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0678 727f648ad5ef6edd64ab6ff20f2b3bb0 280 Pfam PF00005 ABC transporter 23 172 1.9E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0678 727f648ad5ef6edd64ab6ff20f2b3bb0 280 SMART SM00382 32 220 1.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0678 727f648ad5ef6edd64ab6ff20f2b3bb0 280 Gene3D G3DSA:3.40.50.300 1 257 1.6E-69 T 14-10-2018 Tlie_1366 f0f8210026904aa5232a9a707b59a678 428 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 428 183.585 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tlie_1366 f0f8210026904aa5232a9a707b59a678 428 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 8 424 2.2E-159 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tlie_1366 f0f8210026904aa5232a9a707b59a678 428 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 134 145 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tlie_1366 f0f8210026904aa5232a9a707b59a678 428 Pfam PF00709 Adenylosuccinate synthetase 8 424 1.4E-174 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tlie_1366 f0f8210026904aa5232a9a707b59a678 428 SUPERFAMILY SSF52540 6 425 4.14E-162 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1366 f0f8210026904aa5232a9a707b59a678 428 SMART SM00788 5 425 6.2E-255 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tlie_1366 f0f8210026904aa5232a9a707b59a678 428 Gene3D G3DSA:3.90.170.10 268 427 5.7E-68 T 14-10-2018 Tlie_1366 f0f8210026904aa5232a9a707b59a678 428 Gene3D G3DSA:1.10.300.10 102 202 1.4E-96 T 14-10-2018 Tlie_1366 f0f8210026904aa5232a9a707b59a678 428 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 12 19 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tlie_1366 f0f8210026904aa5232a9a707b59a678 428 Gene3D G3DSA:3.40.440.10 8 257 1.4E-96 T 14-10-2018 Tlie_0610 095b0d0ee0b683b587e774022afbed5f 210 SUPERFAMILY SSF46785 5 75 2.18E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_0610 095b0d0ee0b683b587e774022afbed5f 210 Gene3D G3DSA:1.10.10.10 1 73 1.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0610 095b0d0ee0b683b587e774022afbed5f 210 SUPERFAMILY SSF51735 79 204 1.53E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0610 095b0d0ee0b683b587e774022afbed5f 210 Pfam PF06971 Putative DNA-binding protein N-terminus 2 50 6.0E-20 T 14-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 Tlie_0610 095b0d0ee0b683b587e774022afbed5f 210 SMART SM00881 75 178 9.9E-14 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Tlie_0610 095b0d0ee0b683b587e774022afbed5f 210 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 1 207 31.464 T 14-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 Tlie_0610 095b0d0ee0b683b587e774022afbed5f 210 Gene3D G3DSA:3.40.50.720 74 205 2.3E-42 T 14-10-2018 Tlie_0610 095b0d0ee0b683b587e774022afbed5f 210 Pfam PF02629 CoA binding domain 81 175 7.6E-22 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Tlie_1074 38432c20439720f1294a938b5f3d106b 351 Gene3D G3DSA:3.40.50.620 1 204 1.7E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1074 38432c20439720f1294a938b5f3d106b 351 Gene3D G3DSA:2.40.30.10 268 347 3.8E-12 T 14-10-2018 Tlie_1074 38432c20439720f1294a938b5f3d106b 351 SUPERFAMILY SSF52402 3 237 3.09E-37 T 14-10-2018 Tlie_1074 38432c20439720f1294a938b5f3d106b 351 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4 342 7.9E-77 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Tlie_1074 38432c20439720f1294a938b5f3d106b 351 Pfam PF03054 tRNA methyl transferase 4 342 1.2E-85 T 14-10-2018 Tlie_1074 38432c20439720f1294a938b5f3d106b 351 Gene3D G3DSA:2.30.30.280 208 266 1.1E-17 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Tlie_0536 fd44d496ee02df5f4245b8bd689ed6fc 276 Pfam PF08222 CodY helix-turn-helix domain 217 272 1.9E-30 T 14-10-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal Tlie_0536 fd44d496ee02df5f4245b8bd689ed6fc 276 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 23 272 2.3E-89 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 Tlie_0536 fd44d496ee02df5f4245b8bd689ed6fc 276 Pfam PF06018 CodY GAF-like domain 23 196 1.1E-47 T 14-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 Tlie_0536 fd44d496ee02df5f4245b8bd689ed6fc 276 Gene3D G3DSA:1.10.10.10 179 275 6.1E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0536 fd44d496ee02df5f4245b8bd689ed6fc 276 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 18 276 98.796 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 Tlie_0536 fd44d496ee02df5f4245b8bd689ed6fc 276 SUPERFAMILY SSF55781 47 185 1.73E-9 T 14-10-2018 Tlie_0536 fd44d496ee02df5f4245b8bd689ed6fc 276 Gene3D G3DSA:3.30.450.40 13 178 6.7E-50 T 14-10-2018 IPR029016 GAF-like domain superfamily Tlie_0536 fd44d496ee02df5f4245b8bd689ed6fc 276 PIRSF PIRSF011572 20 275 7.4E-92 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 Tlie_0536 fd44d496ee02df5f4245b8bd689ed6fc 276 SUPERFAMILY SSF46785 186 273 6.08E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-45 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.1E-45 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.1E-45 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.1E-45 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.1E-45 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-45 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.1E-45 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.1E-45 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 Gene3D G3DSA:3.30.70.1430 555 663 0.0 T 14-10-2018 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 SUPERFAMILY SSF82866 804 1026 4.71E-55 T 14-10-2018 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 Pfam PF00873 AcrB/AcrD/AcrF family 5 1022 2.3E-263 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 SUPERFAMILY SSF82714 182 264 7.06E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 Gene3D G3DSA:3.30.2090.10 712 805 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 Gene3D G3DSA:1.20.1640.10 501 1019 0.0 T 14-10-2018 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 SUPERFAMILY SSF82693 554 657 3.14E-12 T 14-10-2018 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 SUPERFAMILY SSF82714 713 801 2.75E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 SUPERFAMILY SSF82693 136 323 2.59E-20 T 14-10-2018 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 Gene3D G3DSA:3.30.70.1430 40 813 0.0 T 14-10-2018 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 Gene3D G3DSA:3.30.70.1440 664 862 0.0 T 14-10-2018 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 Gene3D G3DSA:1.20.1640.10 10 500 0.0 T 14-10-2018 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 SUPERFAMILY SSF82693 40 131 2.09E-22 T 14-10-2018 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 Gene3D G3DSA:3.30.2090.10 177 267 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 SUPERFAMILY SSF82866 288 487 9.42E-42 T 14-10-2018 Tlie_0437 147a8dcdd0e6c0bc702489222e512330 1039 Gene3D G3DSA:3.30.70.1320 132 325 0.0 T 14-10-2018 Tlie_0720 4a12fd2c3637bfe02e05e89a898e0e6b 488 Pfam PF00512 His Kinase A (phospho-acceptor) domain 273 335 4.1E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tlie_0720 4a12fd2c3637bfe02e05e89a898e0e6b 488 SUPERFAMILY SSF55874 327 477 1.7E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0720 4a12fd2c3637bfe02e05e89a898e0e6b 488 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 478 3.7E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_0720 4a12fd2c3637bfe02e05e89a898e0e6b 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 2.7E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_0720 4a12fd2c3637bfe02e05e89a898e0e6b 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 2.7E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_0720 4a12fd2c3637bfe02e05e89a898e0e6b 488 Gene3D G3DSA:3.30.565.10 334 483 1.3E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0720 4a12fd2c3637bfe02e05e89a898e0e6b 488 SMART SM00387 380 487 9.1E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_0720 4a12fd2c3637bfe02e05e89a898e0e6b 488 SMART SM00388 270 336 2.3E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tlie_0720 4a12fd2c3637bfe02e05e89a898e0e6b 488 SUPERFAMILY SSF47384 254 335 7.19E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tlie_0720 4a12fd2c3637bfe02e05e89a898e0e6b 488 Gene3D G3DSA:1.10.287.130 219 333 5.6E-16 T 14-10-2018 Tlie_0986 982f519594b1f62c4c9484ac0b36b806 411 SUPERFAMILY SSF63882 9 182 3.53E-47 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_0986 982f519594b1f62c4c9484ac0b36b806 411 Pfam PF03454 MoeA C-terminal region (domain IV) 349 411 1.8E-12 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_0986 982f519594b1f62c4c9484ac0b36b806 411 SUPERFAMILY SSF63867 344 411 9.03E-15 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_0986 982f519594b1f62c4c9484ac0b36b806 411 Gene3D G3DSA:3.40.980.10 184 328 9.4E-86 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tlie_0986 982f519594b1f62c4c9484ac0b36b806 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 12 176 3.5E-35 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_0986 982f519594b1f62c4c9484ac0b36b806 411 Pfam PF00994 Probable molybdopterin binding domain 188 326 6.6E-25 T 14-10-2018 IPR001453 MoaB/Mog domain Tlie_0986 982f519594b1f62c4c9484ac0b36b806 411 Gene3D G3DSA:2.40.340.10 347 411 3.3E-16 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_0986 982f519594b1f62c4c9484ac0b36b806 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 185 324 4.2E-26 T 14-10-2018 IPR001453 MoaB/Mog domain Tlie_0986 982f519594b1f62c4c9484ac0b36b806 411 Gene3D G3DSA:3.90.105.10 33 183 9.4E-86 T 14-10-2018 Tlie_0986 982f519594b1f62c4c9484ac0b36b806 411 SMART SM00852 188 330 4.1E-30 T 14-10-2018 IPR001453 MoaB/Mog domain Tlie_0986 982f519594b1f62c4c9484ac0b36b806 411 Gene3D G3DSA:2.170.190.11 54 150 9.4E-86 T 14-10-2018 Tlie_0986 982f519594b1f62c4c9484ac0b36b806 411 SUPERFAMILY SSF53218 185 333 8.25E-32 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tlie_0993 80518acd47b88402f22697aade4710fc 303 Pfam PF02650 WhiA C-terminal HTH domain 203 285 5.1E-23 T 14-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal Tlie_0993 80518acd47b88402f22697aade4710fc 303 Gene3D G3DSA:1.10.10.10 198 288 2.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0993 80518acd47b88402f22697aade4710fc 303 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 146 285 1.1E-24 T 14-10-2018 IPR033981 Sporulation regulator WhiA-like Tlie_0730 32dc91c9f93b16dd34dd4a10ce9f2b44 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 5.0E-5 T 14-10-2018 Tlie_0730 32dc91c9f93b16dd34dd4a10ce9f2b44 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.181 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0730 32dc91c9f93b16dd34dd4a10ce9f2b44 119 Pfam PF00453 Ribosomal protein L20 3 109 4.2E-44 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0730 32dc91c9f93b16dd34dd4a10ce9f2b44 119 SUPERFAMILY SSF74731 2 117 3.14E-45 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0730 32dc91c9f93b16dd34dd4a10ce9f2b44 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 6.3E-36 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0730 32dc91c9f93b16dd34dd4a10ce9f2b44 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 6.3E-36 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0730 32dc91c9f93b16dd34dd4a10ce9f2b44 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 6.3E-36 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0730 32dc91c9f93b16dd34dd4a10ce9f2b44 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0730 32dc91c9f93b16dd34dd4a10ce9f2b44 119 Gene3D G3DSA:1.10.1900.20 56 118 8.0E-30 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0730 32dc91c9f93b16dd34dd4a10ce9f2b44 119 Gene3D G3DSA:1.10.720.90 2 55 6.1E-19 T 14-10-2018 Tlie_0730 32dc91c9f93b16dd34dd4a10ce9f2b44 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.6E-44 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0757 9ba8ea960b7a1b53070cd5a4cbd292bb 280 SUPERFAMILY SSF51658 3 276 1.3E-79 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Tlie_0757 9ba8ea960b7a1b53070cd5a4cbd292bb 280 Gene3D G3DSA:3.20.20.150 1 278 1.3E-92 T 14-10-2018 Tlie_0757 9ba8ea960b7a1b53070cd5a4cbd292bb 280 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 275 1.1E-85 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Tlie_0757 9ba8ea960b7a1b53070cd5a4cbd292bb 280 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 213 229 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Tlie_0757 9ba8ea960b7a1b53070cd5a4cbd292bb 280 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 67 75 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Tlie_0757 9ba8ea960b7a1b53070cd5a4cbd292bb 280 Pfam PF01261 Xylose isomerase-like TIM barrel 24 237 1.1E-29 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Tlie_0757 9ba8ea960b7a1b53070cd5a4cbd292bb 280 SMART SM00518 3 278 2.2E-89 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Tlie_0757 9ba8ea960b7a1b53070cd5a4cbd292bb 280 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 278 38.948 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Tlie_0757 9ba8ea960b7a1b53070cd5a4cbd292bb 280 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 173 180 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Tlie_0276 1a4a4ae5124348c2d6db4e95de569ae6 190 SUPERFAMILY SSF52218 1 188 2.17E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tlie_0276 1a4a4ae5124348c2d6db4e95de569ae6 190 Pfam PF03358 NADPH-dependent FMN reductase 1 156 1.4E-29 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Tlie_0276 1a4a4ae5124348c2d6db4e95de569ae6 190 Gene3D G3DSA:3.40.50.360 1 187 7.5E-40 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tlie_0422 86d3c750c5307289e5ef0a179a5cfe99 273 Gene3D G3DSA:3.20.20.140 4 246 1.0E-82 T 14-10-2018 Tlie_0422 86d3c750c5307289e5ef0a179a5cfe99 273 SMART SM00481 4 69 1.4E-20 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Tlie_0422 86d3c750c5307289e5ef0a179a5cfe99 273 Pfam PF02811 PHP domain 5 67 9.6E-12 T 14-10-2018 IPR004013 PHP domain GO:0003824 Tlie_0422 86d3c750c5307289e5ef0a179a5cfe99 273 Gene3D G3DSA:1.10.150.650 94 165 1.0E-82 T 14-10-2018 Tlie_0422 86d3c750c5307289e5ef0a179a5cfe99 273 SUPERFAMILY SSF89550 2 253 8.63E-42 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tlie_0107 44d07928d5420ee04f6f7447ec022354 481 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 224 459 3.0E-38 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Tlie_0107 44d07928d5420ee04f6f7447ec022354 481 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 111 3.0E-16 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 Tlie_0464 63de8dc3ed99822a38527629ad80a9dc 414 Pfam PF13289 SIR2-like domain 151 316 1.2E-23 T 14-10-2018 IPR039444 SIR2-like domain Tlie_1895 88af4eab7eaf7b166e022ec814de0d1b 393 Pfam PF01264 Chorismate synthase 4 363 4.5E-105 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tlie_1895 88af4eab7eaf7b166e022ec814de0d1b 393 PIRSF PIRSF001456 1 385 3.0E-112 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tlie_1895 88af4eab7eaf7b166e022ec814de0d1b 393 ProSitePatterns PS00789 Chorismate synthase signature 3. 337 353 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tlie_1895 88af4eab7eaf7b166e022ec814de0d1b 393 Hamap MF_00300 Chorismate synthase [aroC]. 4 370 32.565 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tlie_1895 88af4eab7eaf7b166e022ec814de0d1b 393 ProSitePatterns PS00787 Chorismate synthase signature 1. 10 25 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tlie_1895 88af4eab7eaf7b166e022ec814de0d1b 393 Gene3D G3DSA:3.60.150.10 3 393 8.3E-136 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tlie_1895 88af4eab7eaf7b166e022ec814de0d1b 393 ProSitePatterns PS00788 Chorismate synthase signature 2. 132 148 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tlie_1895 88af4eab7eaf7b166e022ec814de0d1b 393 SUPERFAMILY SSF103263 4 384 4.71E-125 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tlie_1895 88af4eab7eaf7b166e022ec814de0d1b 393 TIGRFAM TIGR00033 aroC: chorismate synthase 4 368 7.3E-107 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tlie_1435 84f8ea89ba6b6863d7ab9f0dcf73f5fd 159 SMART SM00529 26 125 1.3E-19 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 Tlie_1435 84f8ea89ba6b6863d7ab9f0dcf73f5fd 159 Gene3D G3DSA:1.10.10.10 5 135 9.5E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1435 84f8ea89ba6b6863d7ab9f0dcf73f5fd 159 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 66 133 4.8E-16 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 Tlie_1435 84f8ea89ba6b6863d7ab9f0dcf73f5fd 159 SUPERFAMILY SSF47979 65 142 4.32E-14 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 Tlie_1435 84f8ea89ba6b6863d7ab9f0dcf73f5fd 159 SUPERFAMILY SSF46785 4 64 7.0E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1435 84f8ea89ba6b6863d7ab9f0dcf73f5fd 159 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 4 59 2.3E-15 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 Tlie_1490 c33421cff6a3c5a3e7496659ccc19cdd 147 PRINTS PR01438 Universal stress protein signature 123 145 2.5E-13 T 14-10-2018 IPR006015 Universal stress protein A Tlie_1490 c33421cff6a3c5a3e7496659ccc19cdd 147 PRINTS PR01438 Universal stress protein signature 1 14 2.5E-13 T 14-10-2018 IPR006015 Universal stress protein A Tlie_1490 c33421cff6a3c5a3e7496659ccc19cdd 147 PRINTS PR01438 Universal stress protein signature 105 117 2.5E-13 T 14-10-2018 IPR006015 Universal stress protein A Tlie_1490 c33421cff6a3c5a3e7496659ccc19cdd 147 SUPERFAMILY SSF52402 1 144 1.74E-33 T 14-10-2018 Tlie_1490 c33421cff6a3c5a3e7496659ccc19cdd 147 Pfam PF00582 Universal stress protein family 1 143 8.2E-33 T 14-10-2018 IPR006016 UspA Tlie_1490 c33421cff6a3c5a3e7496659ccc19cdd 147 Gene3D G3DSA:3.40.50.620 1 145 2.8E-34 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_0706 34e3c8245ff29458f1d2457f7f5c7c39 638 Gene3D G3DSA:3.40.50.300 30 264 3.4E-39 T 14-10-2018 Tlie_0706 34e3c8245ff29458f1d2457f7f5c7c39 638 SUPERFAMILY SSF52540 462 627 9.26E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0706 34e3c8245ff29458f1d2457f7f5c7c39 638 Pfam PF04851 Type III restriction enzyme, res subunit 31 237 1.9E-8 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Tlie_0706 34e3c8245ff29458f1d2457f7f5c7c39 638 SMART SM00491 490 617 1.0E-15 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Tlie_0706 34e3c8245ff29458f1d2457f7f5c7c39 638 Pfam PF13307 Helicase C-terminal domain 474 627 2.6E-25 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Tlie_0706 34e3c8245ff29458f1d2457f7f5c7c39 638 Gene3D G3DSA:3.40.50.300 448 634 3.5E-29 T 14-10-2018 Tlie_0706 34e3c8245ff29458f1d2457f7f5c7c39 638 SMART SM00488 30 279 0.0074 T 14-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 Tlie_0706 34e3c8245ff29458f1d2457f7f5c7c39 638 SUPERFAMILY SSF52540 16 611 4.88E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0706 34e3c8245ff29458f1d2457f7f5c7c39 638 SMART SM00487 28 282 5.2E-6 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tlie_1725 a4b832e3176499a64b124ea433648d1e 537 SMART SM00382 57 245 7.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1725 a4b832e3176499a64b124ea433648d1e 537 SMART SM00382 313 518 9.7 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1725 a4b832e3176499a64b124ea433648d1e 537 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_1725 a4b832e3176499a64b124ea433648d1e 537 Gene3D G3DSA:3.40.50.300 283 525 4.4E-34 T 14-10-2018 Tlie_1725 a4b832e3176499a64b124ea433648d1e 537 SUPERFAMILY SSF52540 286 518 2.3E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1725 a4b832e3176499a64b124ea433648d1e 537 SUPERFAMILY SSF52540 33 258 5.83E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1725 a4b832e3176499a64b124ea433648d1e 537 Pfam PF00005 ABC transporter 305 456 3.1E-13 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1725 a4b832e3176499a64b124ea433648d1e 537 Gene3D G3DSA:3.40.50.300 20 277 1.6E-59 T 14-10-2018 Tlie_1725 a4b832e3176499a64b124ea433648d1e 537 Pfam PF00005 ABC transporter 50 197 1.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1554 1c4e1e11d7434822ac78ade6295b4c76 545 SUPERFAMILY SSF55186 64 214 7.72E-21 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Tlie_1554 1c4e1e11d7434822ac78ade6295b4c76 545 SUPERFAMILY SSF52540 282 543 6.95E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1554 1c4e1e11d7434822ac78ade6295b4c76 545 Gene3D G3DSA:3.30.980.10 65 202 2.0E-14 T 14-10-2018 Tlie_1554 1c4e1e11d7434822ac78ade6295b4c76 545 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 284 481 1.7E-19 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Tlie_1554 1c4e1e11d7434822ac78ade6295b4c76 545 Gene3D G3DSA:3.40.50.300 222 490 1.2E-53 T 14-10-2018 Tlie_1554 1c4e1e11d7434822ac78ade6295b4c76 545 PRINTS PR00988 Uridine kinase signature 359 374 1.9E-7 T 14-10-2018 Tlie_1554 1c4e1e11d7434822ac78ade6295b4c76 545 PRINTS PR00988 Uridine kinase signature 282 299 1.9E-7 T 14-10-2018 Tlie_1554 1c4e1e11d7434822ac78ade6295b4c76 545 PRINTS PR00988 Uridine kinase signature 314 325 1.9E-7 T 14-10-2018 Tlie_1554 1c4e1e11d7434822ac78ade6295b4c76 545 SMART SM00382 281 451 8.3E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1582 7624d465e2efc54ff96eb6d96a761bef 381 Gene3D G3DSA:3.30.9.10 88 315 1.8E-117 T 14-10-2018 Tlie_1582 7624d465e2efc54ff96eb6d96a761bef 381 Pfam PF01266 FAD dependent oxidoreductase 7 351 1.9E-68 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Tlie_1582 7624d465e2efc54ff96eb6d96a761bef 381 SUPERFAMILY SSF51905 6 375 1.86E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1582 7624d465e2efc54ff96eb6d96a761bef 381 Gene3D G3DSA:3.50.50.60 7 357 1.8E-117 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1582 7624d465e2efc54ff96eb6d96a761bef 381 SUPERFAMILY SSF54373 222 313 3.04E-6 T 14-10-2018 Tlie_0675 4858f22239a1f5bed90853784addc659 339 Gene3D G3DSA:3.30.1360.10 11 215 2.9E-80 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0675 4858f22239a1f5bed90853784addc659 339 SUPERFAMILY SSF55257 6 223 1.08E-29 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0675 4858f22239a1f5bed90853784addc659 339 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 252 315 1.5E-20 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0675 4858f22239a1f5bed90853784addc659 339 SMART SM00662 17 224 6.0E-84 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0675 4858f22239a1f5bed90853784addc659 339 SUPERFAMILY SSF47789 258 322 1.96E-19 T 14-10-2018 Tlie_0675 4858f22239a1f5bed90853784addc659 339 SUPERFAMILY SSF56553 47 168 2.09E-37 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0675 4858f22239a1f5bed90853784addc659 339 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 17 321 8.2E-107 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0675 4858f22239a1f5bed90853784addc659 339 Gene3D G3DSA:1.10.150.20 231 339 9.4E-26 T 14-10-2018 Tlie_0675 4858f22239a1f5bed90853784addc659 339 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 23 215 8.1E-22 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0675 4858f22239a1f5bed90853784addc659 339 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 56 146 4.1E-21 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0675 4858f22239a1f5bed90853784addc659 339 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 323 34.084 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0675 4858f22239a1f5bed90853784addc659 339 Gene3D G3DSA:2.170.120.12 47 167 2.9E-80 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0675 4858f22239a1f5bed90853784addc659 339 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 262 322 6.0E-12 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0191 1916b3bd5a08f41ebc56364f56cb854d 533 Pfam PF00072 Response regulator receiver domain 12 124 6.2E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0191 1916b3bd5a08f41ebc56364f56cb854d 533 SUPERFAMILY SSF52172 7 135 1.57E-26 T 14-10-2018 IPR011006 CheY-like superfamily Tlie_0191 1916b3bd5a08f41ebc56364f56cb854d 533 SMART SM00448 9 123 3.6E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0191 1916b3bd5a08f41ebc56364f56cb854d 533 Pfam PF12833 Helix-turn-helix domain 453 530 1.1E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Tlie_0191 1916b3bd5a08f41ebc56364f56cb854d 533 Gene3D G3DSA:3.40.50.2300 2 144 6.3E-24 T 14-10-2018 Tlie_0191 1916b3bd5a08f41ebc56364f56cb854d 533 SUPERFAMILY SSF46689 483 531 1.65E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0191 1916b3bd5a08f41ebc56364f56cb854d 533 SMART SM00342 446 528 6.2E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Tlie_0191 1916b3bd5a08f41ebc56364f56cb854d 533 Gene3D G3DSA:1.10.10.60 478 532 1.5E-11 T 14-10-2018 Tlie_0191 1916b3bd5a08f41ebc56364f56cb854d 533 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 483 524 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Tlie_0191 1916b3bd5a08f41ebc56364f56cb854d 533 Gene3D G3DSA:1.10.10.60 429 477 1.4E-12 T 14-10-2018 Tlie_0749 35ee74a9aa361e800c276c4d29ce1a9e 310 Gene3D G3DSA:3.40.1190.20 1 309 6.6E-82 T 14-10-2018 IPR029056 Ribokinase-like Tlie_0749 35ee74a9aa361e800c276c4d29ce1a9e 310 PIRSF PIRSF000535 1 309 1.8E-66 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Tlie_0749 35ee74a9aa361e800c276c4d29ce1a9e 310 SUPERFAMILY SSF53613 1 287 1.5E-52 T 14-10-2018 IPR029056 Ribokinase-like Tlie_0749 35ee74a9aa361e800c276c4d29ce1a9e 310 Pfam PF00294 pfkB family carbohydrate kinase 27 280 1.0E-35 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Tlie_0749 35ee74a9aa361e800c276c4d29ce1a9e 310 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 306 1.3E-75 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 145 6.9E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 SUPERFAMILY SSF52540 9 231 1.5E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 SUPERFAMILY SSF50465 304 399 5.76E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 Pfam PF00009 Elongation factor Tu GTP binding domain 10 206 3.3E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 399 3.3E-222 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 Pfam PF03144 Elongation factor Tu domain 2 230 299 3.5E-20 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 Pfam PF03143 Elongation factor Tu C-terminal domain 304 398 2.4E-32 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 SUPERFAMILY SSF50447 210 307 1.75E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 400 60.845 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 Gene3D G3DSA:2.40.30.10 211 340 1.5E-56 T 14-10-2018 Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 Gene3D G3DSA:2.40.30.10 344 399 4.4E-28 T 14-10-2018 Tlie_0442 e37425f593d759f9e00c62a60ce7e5b3 400 Gene3D G3DSA:3.40.50.300 1 208 3.3E-71 T 14-10-2018 Tlie_0879 bd838ff6835eb28b638c31d39ad9f837 162 PIRSF PIRSF004749 1 162 8.7E-53 T 14-10-2018 IPR023635 Peptide deformylase Tlie_0879 bd838ff6835eb28b638c31d39ad9f837 162 Pfam PF01327 Polypeptide deformylase 5 149 2.1E-47 T 14-10-2018 IPR023635 Peptide deformylase Tlie_0879 bd838ff6835eb28b638c31d39ad9f837 162 Hamap MF_00163 Peptide deformylase [def]. 2 159 28.648 T 14-10-2018 IPR023635 Peptide deformylase Tlie_0879 bd838ff6835eb28b638c31d39ad9f837 162 Gene3D G3DSA:3.90.45.10 1 162 4.8E-58 T 14-10-2018 IPR036821 Peptide deformylase superfamily Tlie_0879 bd838ff6835eb28b638c31d39ad9f837 162 SUPERFAMILY SSF56420 3 160 1.57E-55 T 14-10-2018 IPR036821 Peptide deformylase superfamily Tlie_0879 bd838ff6835eb28b638c31d39ad9f837 162 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 157 2.0E-48 T 14-10-2018 IPR023635 Peptide deformylase Tlie_0879 bd838ff6835eb28b638c31d39ad9f837 162 PRINTS PR01576 Peptide deformylase signature 33 62 2.0E-33 T 14-10-2018 IPR023635 Peptide deformylase Tlie_0879 bd838ff6835eb28b638c31d39ad9f837 162 PRINTS PR01576 Peptide deformylase signature 98 116 2.0E-33 T 14-10-2018 IPR023635 Peptide deformylase Tlie_0879 bd838ff6835eb28b638c31d39ad9f837 162 PRINTS PR01576 Peptide deformylase signature 86 97 2.0E-33 T 14-10-2018 IPR023635 Peptide deformylase Tlie_0879 bd838ff6835eb28b638c31d39ad9f837 162 PRINTS PR01576 Peptide deformylase signature 117 146 2.0E-33 T 14-10-2018 IPR023635 Peptide deformylase Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 Pfam PF00384 Molybdopterin oxidoreductase 279 652 2.9E-14 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 Gene3D G3DSA:3.40.228.10 354 547 1.3E-16 T 14-10-2018 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 SUPERFAMILY SSF54862 77 214 2.64E-34 T 14-10-2018 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 Gene3D G3DSA:3.30.70.20 130 210 4.3E-19 T 14-10-2018 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 SMART SM00926 222 277 1.4E-8 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 Gene3D G3DSA:3.40.50.740 558 658 5.1E-12 T 14-10-2018 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 SUPERFAMILY SSF53706 224 659 6.81E-59 T 14-10-2018 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 Pfam PF13187 4Fe-4S dicluster domain 147 207 2.5E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 Gene3D G3DSA:3.40.50.740 284 550 1.3E-16 T 14-10-2018 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 Gene3D G3DSA:3.10.20.740 3 125 4.8E-41 T 14-10-2018 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 Gene3D G3DSA:2.20.25.90 224 271 5.0E-13 T 14-10-2018 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 227 244 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 SUPERFAMILY SSF54292 4 76 3.09E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 124 1.4E-13 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 SMART SM00929 85 125 4.4E-14 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 224 268 5.0E-12 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 78 9.0E-22 T 14-10-2018 Tlie_1617 c6dcad9fe70934454c8be9b9ef9ff825 690 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 192 203 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_0853 124c78255122be6868d13bfe157f49f9 374 Gene3D G3DSA:3.40.50.300 33 276 1.8E-77 T 14-10-2018 Tlie_0853 124c78255122be6868d13bfe157f49f9 374 SUPERFAMILY SSF54752 281 334 2.09E-16 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Tlie_0853 124c78255122be6868d13bfe157f49f9 374 SUPERFAMILY SSF52540 13 276 4.99E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0853 124c78255122be6868d13bfe157f49f9 374 PRINTS PR00142 RecA protein signature 100 129 7.3E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tlie_0853 124c78255122be6868d13bfe157f49f9 374 PRINTS PR00142 RecA protein signature 134 163 7.3E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tlie_0853 124c78255122be6868d13bfe157f49f9 374 PRINTS PR00142 RecA protein signature 306 323 7.3E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tlie_0853 124c78255122be6868d13bfe157f49f9 374 PRINTS PR00142 RecA protein signature 252 281 7.3E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tlie_0853 124c78255122be6868d13bfe157f49f9 374 PRINTS PR00142 RecA protein signature 172 201 7.3E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tlie_0853 124c78255122be6868d13bfe157f49f9 374 PRINTS PR00142 RecA protein signature 219 247 7.3E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tlie_0853 124c78255122be6868d13bfe157f49f9 374 Gene3D G3DSA:3.30.250.10 278 336 1.9E-21 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Tlie_0853 124c78255122be6868d13bfe157f49f9 374 SMART SM00382 64 237 2.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0853 124c78255122be6868d13bfe157f49f9 374 Hamap MF_00268 Protein RecA [recA]. 12 338 46.617 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tlie_0853 124c78255122be6868d13bfe157f49f9 374 Pfam PF00154 recA bacterial DNA recombination protein 15 276 4.3E-120 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tlie_0853 124c78255122be6868d13bfe157f49f9 374 ProSitePatterns PS00321 recA signature. 222 230 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Tlie_0853 124c78255122be6868d13bfe157f49f9 374 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 12 333 1.2E-146 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 PRINTS PR00819 CbxX/CfqX superfamily signature 17 31 2.2E-42 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 PRINTS PR00819 CbxX/CfqX superfamily signature 236 248 2.2E-42 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 PRINTS PR00819 CbxX/CfqX superfamily signature 96 110 2.2E-42 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 PRINTS PR00819 CbxX/CfqX superfamily signature 58 73 2.2E-42 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 PRINTS PR00819 CbxX/CfqX superfamily signature 179 198 2.2E-42 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 PRINTS PR00819 CbxX/CfqX superfamily signature 141 153 2.2E-42 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 PRINTS PR00819 CbxX/CfqX superfamily signature 110 129 2.2E-42 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 PRINTS PR00819 CbxX/CfqX superfamily signature 162 179 2.2E-42 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 SUPERFAMILY SSF52540 18 274 3.1E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 SUPERFAMILY SSF48452 368 564 2.53E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 Gene3D G3DSA:3.40.50.300 4 191 3.0E-45 T 14-10-2018 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 SUPERFAMILY SSF48452 462 839 7.96E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 SMART SM00382 55 194 2.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 Gene3D G3DSA:1.25.40.10 489 616 4.7E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 Gene3D G3DSA:1.10.8.60 192 274 3.1E-17 T 14-10-2018 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 60 191 9.2E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 SMART SM00028 507 540 1.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 SMART SM00028 787 820 190.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 SMART SM00028 334 366 82.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 SMART SM00028 575 608 310.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 SMART SM00028 541 574 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 SMART SM00028 398 431 38.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0796 0b2a98af1ad9d932907cee7eabb735ce 885 Gene3D G3DSA:1.25.40.10 275 435 3.6E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_0456 46fa18099609266e46f0fde498c02280 631 Pfam PF00999 Sodium/hydrogen exchanger family 12 389 1.5E-45 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Tlie_0456 46fa18099609266e46f0fde498c02280 631 Pfam PF02254 TrkA-N domain 415 522 5.5E-5 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Tlie_0456 46fa18099609266e46f0fde498c02280 631 SUPERFAMILY SSF116726 547 622 3.79E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tlie_0456 46fa18099609266e46f0fde498c02280 631 Gene3D G3DSA:3.30.70.1450 543 623 1.7E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tlie_0456 46fa18099609266e46f0fde498c02280 631 Gene3D G3DSA:1.20.1530.20 8 405 1.0E-54 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Tlie_0456 46fa18099609266e46f0fde498c02280 631 Pfam PF02080 TrkA-C domain 555 622 1.8E-12 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Tlie_0456 46fa18099609266e46f0fde498c02280 631 SUPERFAMILY SSF51735 412 545 6.4E-8 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0456 46fa18099609266e46f0fde498c02280 631 Gene3D G3DSA:3.40.50.720 412 524 1.1E-5 T 14-10-2018 Tlie_1089 bc3bed05e6a9caa0047fbed44a19e047 335 SUPERFAMILY SSF46785 3 63 2.42E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1089 bc3bed05e6a9caa0047fbed44a19e047 335 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 90 328 5.5E-57 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tlie_1089 bc3bed05e6a9caa0047fbed44a19e047 335 SUPERFAMILY SSF55681 76 266 2.65E-51 T 14-10-2018 Tlie_1089 bc3bed05e6a9caa0047fbed44a19e047 335 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 10 329 32.236 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 Tlie_1089 bc3bed05e6a9caa0047fbed44a19e047 335 Gene3D G3DSA:1.10.10.10 2 65 3.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1089 bc3bed05e6a9caa0047fbed44a19e047 335 Pfam PF08279 HTH domain 9 62 3.2E-18 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Tlie_1089 bc3bed05e6a9caa0047fbed44a19e047 335 Gene3D G3DSA:3.30.930.10 76 281 7.9E-55 T 14-10-2018 Tlie_1089 bc3bed05e6a9caa0047fbed44a19e047 335 Gene3D G3DSA:2.30.30.100 283 330 1.6E-7 T 14-10-2018 Tlie_1089 bc3bed05e6a9caa0047fbed44a19e047 335 Pfam PF03099 Biotin/lipoate A/B protein ligase family 94 217 4.0E-16 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Tlie_1089 bc3bed05e6a9caa0047fbed44a19e047 335 Pfam PF02237 Biotin protein ligase C terminal domain 283 328 1.5E-6 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tlie_1087 4b163aaf6eac466578cb9b2d4afb9e02 584 Pfam PF05580 SpoIVB peptidase S55 25 115 3.4E-12 T 14-10-2018 IPR008763 Peptidase S55, SpoIVB Tlie_1087 4b163aaf6eac466578cb9b2d4afb9e02 584 SUPERFAMILY SSF50494 28 138 5.4E-5 T 14-10-2018 IPR009003 Peptidase S1, PA clan Tlie_1634 8d7090bb6ae22d0fbbace813efac63e8 548 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 547 4.9E-236 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Tlie_1634 8d7090bb6ae22d0fbbace813efac63e8 548 Gene3D G3DSA:1.20.1270.20 1 138 3.7E-49 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Tlie_1634 8d7090bb6ae22d0fbbace813efac63e8 548 Pfam PF03063 Prismane/CO dehydrogenase family 1 544 1.2E-167 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Tlie_1634 8d7090bb6ae22d0fbbace813efac63e8 548 Gene3D G3DSA:3.40.50.2030 379 547 4.2E-63 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Tlie_1634 8d7090bb6ae22d0fbbace813efac63e8 548 PIRSF PIRSF000076 1 548 1.7E-234 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Tlie_1634 8d7090bb6ae22d0fbbace813efac63e8 548 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 548 21.114 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Tlie_1634 8d7090bb6ae22d0fbbace813efac63e8 548 Gene3D G3DSA:1.20.1270.20 148 231 1.7E-27 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Tlie_1634 8d7090bb6ae22d0fbbace813efac63e8 548 SUPERFAMILY SSF56821 1 547 1.24E-195 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Tlie_1634 8d7090bb6ae22d0fbbace813efac63e8 548 Gene3D G3DSA:3.40.50.2030 233 378 2.7E-68 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Tlie_0166 384b34ee9634ab118e2422f957aa38c2 299 SUPERFAMILY SSF103473 96 220 7.59E-7 T 14-10-2018 IPR036259 MFS transporter superfamily Tlie_1310 fe3f493d445fd127589254798a79d793 305 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 17 294 4.2E-65 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tlie_1310 fe3f493d445fd127589254798a79d793 305 SMART SM01130 8 298 1.5E-98 T 14-10-2018 IPR002220 DapA-like GO:0016829 Tlie_1310 fe3f493d445fd127589254798a79d793 305 Pfam PF00701 Dihydrodipicolinate synthetase family 9 292 8.4E-73 T 14-10-2018 IPR002220 DapA-like GO:0016829 Tlie_1310 fe3f493d445fd127589254798a79d793 305 SUPERFAMILY SSF51569 8 295 1.15E-91 T 14-10-2018 Tlie_1310 fe3f493d445fd127589254798a79d793 305 PIRSF PIRSF001365 5 304 1.5E-83 T 14-10-2018 IPR002220 DapA-like GO:0016829 Tlie_1310 fe3f493d445fd127589254798a79d793 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 42 63 5.4E-16 T 14-10-2018 IPR002220 DapA-like GO:0016829 Tlie_1310 fe3f493d445fd127589254798a79d793 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 137 154 5.4E-16 T 14-10-2018 IPR002220 DapA-like GO:0016829 Tlie_1310 fe3f493d445fd127589254798a79d793 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 78 96 5.4E-16 T 14-10-2018 IPR002220 DapA-like GO:0016829 Tlie_1310 fe3f493d445fd127589254798a79d793 305 Gene3D G3DSA:3.20.20.70 3 296 8.7E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1310 fe3f493d445fd127589254798a79d793 305 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 142 172 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Tlie_0101 36a32a702c66d7b8791f47a88a62b6bc 88 Pfam PF01313 Bacterial export proteins, family 3 8 75 1.2E-20 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tlie_0101 36a32a702c66d7b8791f47a88a62b6bc 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 17 38 6.2E-12 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tlie_0101 36a32a702c66d7b8791f47a88a62b6bc 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 53 75 6.2E-12 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tlie_0101 36a32a702c66d7b8791f47a88a62b6bc 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 38 53 6.2E-12 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 Gene3D G3DSA:3.90.640.10 201 288 1.6E-118 T 14-10-2018 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 SUPERFAMILY SSF53067 162 355 2.2E-67 T 14-10-2018 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 Gene3D G3DSA:3.30.420.40 95 349 1.6E-118 T 14-10-2018 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 Pfam PF00012 Hsp70 protein 78 575 2.3E-214 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 Gene3D G3DSA:3.30.420.40 2 77 2.3E-28 T 14-10-2018 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 Gene3D G3DSA:3.30.420.40 160 335 1.6E-118 T 14-10-2018 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 167 180 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 575 3.8E-279 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 Gene3D G3DSA:2.60.34.10 350 478 1.1E-58 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 606 35.941 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 SUPERFAMILY SSF100920 357 512 1.31E-60 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 SUPERFAMILY SSF100934 479 578 2.62E-16 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 Gene3D G3DSA:3.30.30.30 78 94 1.6E-118 T 14-10-2018 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 SUPERFAMILY SSF53067 2 159 5.83E-60 T 14-10-2018 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 Gene3D G3DSA:1.20.1270.10 479 579 9.7E-23 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 PRINTS PR00301 70kDa heat shock protein signature 173 183 2.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 PRINTS PR00301 70kDa heat shock protein signature 307 323 2.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 PRINTS PR00301 70kDa heat shock protein signature 442 458 2.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 PRINTS PR00301 70kDa heat shock protein signature 114 134 2.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 PRINTS PR00301 70kDa heat shock protein signature 361 380 2.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 PRINTS PR00301 70kDa heat shock protein signature 338 358 2.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.1E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 310 324 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Tlie_1350 8e54bdfdafd70e1b3b49f0a655c70fde 609 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Tlie_1653 73a6839c3d8938d2308a6f0b35888f98 297 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 42 265 5.8E-27 T 14-10-2018 IPR005079 Peptidase C45 Tlie_1653 73a6839c3d8938d2308a6f0b35888f98 297 SUPERFAMILY SSF56235 40 163 5.02E-9 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tlie_1653 73a6839c3d8938d2308a6f0b35888f98 297 Gene3D G3DSA:3.60.60.10 30 295 1.7E-72 T 14-10-2018 Tlie_0064 64ef4ac67273a0f18f2ad6200dbc5bb0 635 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 234 2.4E-24 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Tlie_0064 64ef4ac67273a0f18f2ad6200dbc5bb0 635 SUPERFAMILY SSF109604 451 622 2.3E-39 T 14-10-2018 Tlie_0064 64ef4ac67273a0f18f2ad6200dbc5bb0 635 Gene3D G3DSA:1.10.3210.10 441 631 8.4E-69 T 14-10-2018 Tlie_0064 64ef4ac67273a0f18f2ad6200dbc5bb0 635 TIGRFAM TIGR00277 HDIG: HDIG domain 459 551 2.5E-11 T 14-10-2018 IPR006675 HDIG domain Tlie_0064 64ef4ac67273a0f18f2ad6200dbc5bb0 635 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 302 423 3.6E-17 T 14-10-2018 IPR000014 PAS domain Tlie_0064 64ef4ac67273a0f18f2ad6200dbc5bb0 635 SMART SM00471 457 592 3.4E-12 T 14-10-2018 IPR003607 HD/PDEase domain Tlie_0064 64ef4ac67273a0f18f2ad6200dbc5bb0 635 SMART SM00091 304 372 2.5E-10 T 14-10-2018 IPR000014 PAS domain Tlie_0064 64ef4ac67273a0f18f2ad6200dbc5bb0 635 SUPERFAMILY SSF53850 29 248 8.93E-39 T 14-10-2018 Tlie_0064 64ef4ac67273a0f18f2ad6200dbc5bb0 635 Gene3D G3DSA:3.30.450.20 294 440 2.5E-22 T 14-10-2018 Tlie_0064 64ef4ac67273a0f18f2ad6200dbc5bb0 635 Pfam PF01966 HD domain 461 583 4.5E-23 T 14-10-2018 IPR006674 HD domain Tlie_0064 64ef4ac67273a0f18f2ad6200dbc5bb0 635 Gene3D G3DSA:3.40.190.10 28 234 1.6E-28 T 14-10-2018 Tlie_0064 64ef4ac67273a0f18f2ad6200dbc5bb0 635 Gene3D G3DSA:3.40.190.10 111 205 1.6E-28 T 14-10-2018 Tlie_0064 64ef4ac67273a0f18f2ad6200dbc5bb0 635 SUPERFAMILY SSF55785 292 415 1.55E-20 T 14-10-2018 IPR035965 PAS domain superfamily Tlie_0064 64ef4ac67273a0f18f2ad6200dbc5bb0 635 Pfam PF08448 PAS fold 310 417 4.0E-13 T 14-10-2018 IPR013656 PAS fold-4 Tlie_0064 64ef4ac67273a0f18f2ad6200dbc5bb0 635 SMART SM00062 28 250 5.8E-24 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Tlie_0983 1633346ff9e810ccac43dd8b8f79b6cf 378 SMART SM00864 17 209 1.2E-104 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tlie_0983 1633346ff9e810ccac43dd8b8f79b6cf 378 SMART SM00865 211 329 1.4E-45 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Tlie_0983 1633346ff9e810ccac43dd8b8f79b6cf 378 SUPERFAMILY SSF55307 208 323 7.55E-42 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Tlie_0983 1633346ff9e810ccac43dd8b8f79b6cf 378 Gene3D G3DSA:3.40.50.1440 8 224 9.3E-80 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Tlie_0983 1633346ff9e810ccac43dd8b8f79b6cf 378 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 328 2.4E-124 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Tlie_0983 1633346ff9e810ccac43dd8b8f79b6cf 378 Pfam PF12327 FtsZ family, C-terminal domain 226 320 1.2E-27 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Tlie_0983 1633346ff9e810ccac43dd8b8f79b6cf 378 SUPERFAMILY SSF52490 17 212 6.93E-68 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Tlie_0983 1633346ff9e810ccac43dd8b8f79b6cf 378 Gene3D G3DSA:3.30.1330.20 225 349 1.6E-35 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 Tlie_0983 1633346ff9e810ccac43dd8b8f79b6cf 378 PRINTS PR00423 Cell division protein FtsZ signature 193 215 9.0E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tlie_0983 1633346ff9e810ccac43dd8b8f79b6cf 378 PRINTS PR00423 Cell division protein FtsZ signature 102 122 9.0E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tlie_0983 1633346ff9e810ccac43dd8b8f79b6cf 378 PRINTS PR00423 Cell division protein FtsZ signature 130 151 9.0E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tlie_0983 1633346ff9e810ccac43dd8b8f79b6cf 378 PRINTS PR00423 Cell division protein FtsZ signature 216 237 9.0E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tlie_0983 1633346ff9e810ccac43dd8b8f79b6cf 378 ProSitePatterns PS01135 FtsZ protein signature 2. 101 122 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Tlie_0983 1633346ff9e810ccac43dd8b8f79b6cf 378 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 13 356 38.094 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Tlie_0983 1633346ff9e810ccac43dd8b8f79b6cf 378 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 18 177 4.6E-40 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tlie_0828 c8e52e56b878d77e80a0f0cbae9e1eb8 280 Gene3D G3DSA:3.40.50.1000 157 270 2.9E-11 T 14-10-2018 IPR023214 HAD superfamily Tlie_0828 c8e52e56b878d77e80a0f0cbae9e1eb8 280 SUPERFAMILY SSF56784 2 255 1.17E-18 T 14-10-2018 IPR036412 HAD-like superfamily Tlie_0828 c8e52e56b878d77e80a0f0cbae9e1eb8 280 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 169 241 8.4E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tlie_0828 c8e52e56b878d77e80a0f0cbae9e1eb8 280 Pfam PF13419 Haloacid dehalogenase-like hydrolase 169 243 2.1E-5 T 14-10-2018 Tlie_1317 6ddb16669a16744d41340ad70da52c0e 216 SMART SM00345 15 73 5.5E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1317 6ddb16669a16744d41340ad70da52c0e 216 SMART SM00895 83 208 1.1E-18 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_1317 6ddb16669a16744d41340ad70da52c0e 216 Gene3D G3DSA:1.20.120.530 77 215 1.6E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_1317 6ddb16669a16744d41340ad70da52c0e 216 Gene3D G3DSA:1.10.10.10 8 73 3.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1317 6ddb16669a16744d41340ad70da52c0e 216 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 8.0E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1317 6ddb16669a16744d41340ad70da52c0e 216 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 8.0E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1317 6ddb16669a16744d41340ad70da52c0e 216 SUPERFAMILY SSF46785 9 77 1.66E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1317 6ddb16669a16744d41340ad70da52c0e 216 Pfam PF07729 FCD domain 83 207 4.8E-24 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_1317 6ddb16669a16744d41340ad70da52c0e 216 SUPERFAMILY SSF48008 79 213 1.73E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_1317 6ddb16669a16744d41340ad70da52c0e 216 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 72 2.2E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1862 e136f29e799c43cb2cbf71d0f8da25d6 287 SUPERFAMILY SSF52402 30 234 3.75E-39 T 14-10-2018 Tlie_1862 e136f29e799c43cb2cbf71d0f8da25d6 287 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 18 274 1.1E-79 T 14-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 Tlie_1862 e136f29e799c43cb2cbf71d0f8da25d6 287 Gene3D G3DSA:3.40.50.620 12 181 8.1E-27 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1862 e136f29e799c43cb2cbf71d0f8da25d6 287 Pfam PF02540 NAD synthase 20 97 2.2E-7 T 14-10-2018 IPR022310 NAD/GMP synthase Tlie_1862 e136f29e799c43cb2cbf71d0f8da25d6 287 PIRSF PIRSF006661 13 284 3.7E-101 T 14-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 Tlie_1194 53a16f1fd298d90488ecd66834614ab9 391 Pfam PF13556 PucR C-terminal helix-turn-helix domain 329 383 2.4E-13 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Tlie_1194 53a16f1fd298d90488ecd66834614ab9 391 Gene3D G3DSA:1.10.10.2840 262 390 1.5E-13 T 14-10-2018 Tlie_1194 53a16f1fd298d90488ecd66834614ab9 391 Pfam PF05651 Putative sugar diacid recognition 3 132 5.1E-39 T 14-10-2018 IPR008599 Putative sugar diacid recognition Tlie_0223 1507da59c01319fadf97c28faba310a8 405 SUPERFAMILY SSF46689 20 121 6.81E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0223 1507da59c01319fadf97c28faba310a8 405 SUPERFAMILY SSF53098 178 330 1.11E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_1524 e79bf37cd39480471868b257fe1fd8c6 265 SUPERFAMILY SSF53474 20 237 9.1E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Tlie_1524 e79bf37cd39480471868b257fe1fd8c6 265 Gene3D G3DSA:3.40.50.1820 11 239 4.7E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Tlie_1524 e79bf37cd39480471868b257fe1fd8c6 265 Pfam PF12146 Serine aminopeptidase, S33 33 159 7.6E-7 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Tlie_1227 f332c897165a2fb3f5a6be2526db4109 65 SUPERFAMILY SSF54285 2 65 2.04E-15 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Tlie_1227 f332c897165a2fb3f5a6be2526db4109 65 Pfam PF02597 ThiS family 2 65 2.8E-9 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Tlie_1227 f332c897165a2fb3f5a6be2526db4109 65 Gene3D G3DSA:3.10.20.30 1 65 2.3E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Tlie_1227 f332c897165a2fb3f5a6be2526db4109 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 2 65 7.6E-15 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis Tlie_1641 122a4d6d7c79c862e53cc8d34ad88b78 197 Gene3D G3DSA:1.10.1760.20 1 194 6.7E-40 T 14-10-2018 Tlie_1641 122a4d6d7c79c862e53cc8d34ad88b78 197 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 192 2.1E-47 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 Tlie_0135 d19eab96b425c0b0192cccd9876f1809 263 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 2.3E-115 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 Tlie_0135 d19eab96b425c0b0192cccd9876f1809 263 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 7.8E-25 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tlie_0135 d19eab96b425c0b0192cccd9876f1809 263 SUPERFAMILY SSF117143 92 222 4.32E-38 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Tlie_0135 d19eab96b425c0b0192cccd9876f1809 263 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 2.6E-48 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Tlie_0135 d19eab96b425c0b0192cccd9876f1809 263 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 3.2E-34 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Tlie_0135 d19eab96b425c0b0192cccd9876f1809 263 Pfam PF00460 Flagella basal body rod protein 5 35 1.6E-13 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tlie_0135 d19eab96b425c0b0192cccd9876f1809 263 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Tlie_0620 ea1229e632609b3406b820264d9440da 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 300 326 3.1E-46 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tlie_0620 ea1229e632609b3406b820264d9440da 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 68 91 3.1E-46 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tlie_0620 ea1229e632609b3406b820264d9440da 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 187 207 3.1E-46 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tlie_0620 ea1229e632609b3406b820264d9440da 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 48 66 3.1E-46 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tlie_0620 ea1229e632609b3406b820264d9440da 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 132 151 3.1E-46 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tlie_0620 ea1229e632609b3406b820264d9440da 347 Gene3D G3DSA:3.30.420.40 154 317 2.4E-120 T 14-10-2018 Tlie_0620 ea1229e632609b3406b820264d9440da 347 SMART SM00268 6 347 0.0017 T 14-10-2018 IPR004000 Actin family Tlie_0620 ea1229e632609b3406b820264d9440da 347 SUPERFAMILY SSF53067 5 148 1.04E-32 T 14-10-2018 Tlie_0620 ea1229e632609b3406b820264d9440da 347 Gene3D G3DSA:3.30.420.40 9 327 2.4E-120 T 14-10-2018 Tlie_0620 ea1229e632609b3406b820264d9440da 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 5 336 1.0E-125 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tlie_0620 ea1229e632609b3406b820264d9440da 347 Pfam PF06723 MreB/Mbl protein 7 336 1.3E-126 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tlie_0620 ea1229e632609b3406b820264d9440da 347 Gene3D G3DSA:3.90.640.10 186 259 2.4E-120 T 14-10-2018 Tlie_0620 ea1229e632609b3406b820264d9440da 347 SUPERFAMILY SSF53067 149 334 1.3E-47 T 14-10-2018 Tlie_0901 b4a1f04e81e7143f7de8e25826880b25 412 Gene3D G3DSA:3.40.50.10990 210 385 1.4E-73 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Tlie_0901 b4a1f04e81e7143f7de8e25826880b25 412 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 6 203 9.7E-81 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tlie_0901 b4a1f04e81e7143f7de8e25826880b25 412 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 5 207 40.287 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tlie_0901 b4a1f04e81e7143f7de8e25826880b25 412 SUPERFAMILY SSF142695 208 384 1.57E-70 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Tlie_0901 b4a1f04e81e7143f7de8e25826880b25 412 PIRSF PIRSF001259 5 411 1.1E-186 T 14-10-2018 Tlie_0901 b4a1f04e81e7143f7de8e25826880b25 412 Pfam PF00925 GTP cyclohydrolase II 213 381 8.4E-72 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Tlie_0901 b4a1f04e81e7143f7de8e25826880b25 412 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 213 405 4.1E-76 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Tlie_0901 b4a1f04e81e7143f7de8e25826880b25 412 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 208 407 40.178 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Tlie_0901 b4a1f04e81e7143f7de8e25826880b25 412 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 11 202 2.2E-90 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tlie_0901 b4a1f04e81e7143f7de8e25826880b25 412 SUPERFAMILY SSF55821 6 206 5.04E-89 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Tlie_0901 b4a1f04e81e7143f7de8e25826880b25 412 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 6 403 55.848 T 14-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Tlie_0901 b4a1f04e81e7143f7de8e25826880b25 412 Gene3D G3DSA:3.90.870.10 1 209 8.4E-96 T 14-10-2018 Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 SMART SM00304 175 230 1.1E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 SUPERFAMILY SSF158472 176 227 5.75E-8 T 14-10-2018 Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 Gene3D G3DSA:1.10.287.130 237 296 6.7E-11 T 14-10-2018 Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 SUPERFAMILY SSF47384 216 294 4.12E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 SMART SM00387 341 454 1.7E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 Gene3D G3DSA:3.30.565.10 302 455 6.8E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 294 6.5E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 SMART SM00388 231 295 3.3E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 2.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 451 2.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 2.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 407 2.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 Pfam PF00672 HAMP domain 176 222 6.9E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 453 2.0E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 Gene3D G3DSA:1.20.1480.50 147 236 1.1E-14 T 14-10-2018 Tlie_1485 909ef1994d3230ab37dcdc7934fd2831 455 SUPERFAMILY SSF55874 285 452 1.31E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_1005 ad7df955d3dc451b8bf9c4996ff8eb6f 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 104 26.94 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1005 ad7df955d3dc451b8bf9c4996ff8eb6f 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 102 4.1E-39 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1005 ad7df955d3dc451b8bf9c4996ff8eb6f 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 9.8E-37 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1005 ad7df955d3dc451b8bf9c4996ff8eb6f 104 SUPERFAMILY SSF141091 1 103 1.7E-35 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0954 c3240b7ad8cdf7cf2a0e5f8823000a97 383 Gene3D G3DSA:3.50.50.60 9 357 5.7E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0954 c3240b7ad8cdf7cf2a0e5f8823000a97 383 Pfam PF01266 FAD dependent oxidoreductase 8 352 1.4E-67 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Tlie_0954 c3240b7ad8cdf7cf2a0e5f8823000a97 383 SUPERFAMILY SSF51905 7 378 1.0E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0954 c3240b7ad8cdf7cf2a0e5f8823000a97 383 Gene3D G3DSA:3.30.9.10 88 313 5.7E-116 T 14-10-2018 Tlie_0954 c3240b7ad8cdf7cf2a0e5f8823000a97 383 SUPERFAMILY SSF54373 226 314 4.02E-6 T 14-10-2018 Tlie_1665 bdfe1be169a3dbc267deebada97c9403 294 SUPERFAMILY SSF103481 193 292 9.55E-16 T 14-10-2018 Tlie_1665 bdfe1be169a3dbc267deebada97c9403 294 Pfam PF00892 EamA-like transporter family 12 144 7.8E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tlie_1665 bdfe1be169a3dbc267deebada97c9403 294 Pfam PF00892 EamA-like transporter family 155 288 8.7E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tlie_1665 bdfe1be169a3dbc267deebada97c9403 294 SUPERFAMILY SSF103481 43 146 1.28E-11 T 14-10-2018 Tlie_0870 3f047eb3ce2629ab46d718d16804f932 410 SUPERFAMILY SSF51735 181 343 1.98E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0870 3f047eb3ce2629ab46d718d16804f932 410 Gene3D G3DSA:3.40.50.720 183 342 5.3E-164 T 14-10-2018 Tlie_0870 3f047eb3ce2629ab46d718d16804f932 410 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 4 410 1.3E-173 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tlie_0870 3f047eb3ce2629ab46d718d16804f932 410 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 203 219 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tlie_0870 3f047eb3ce2629ab46d718d16804f932 410 SUPERFAMILY SSF52283 4 409 1.87E-82 T 14-10-2018 Tlie_0870 3f047eb3ce2629ab46d718d16804f932 410 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 135 405 4.7E-21 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tlie_0870 3f047eb3ce2629ab46d718d16804f932 410 PIRSF PIRSF001109 2 410 1.9E-171 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tlie_0870 3f047eb3ce2629ab46d718d16804f932 410 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 6 132 2.2E-29 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tlie_0870 3f047eb3ce2629ab46d718d16804f932 410 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 181 341 2.0E-52 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tlie_0870 3f047eb3ce2629ab46d718d16804f932 410 Gene3D G3DSA:3.40.50.1480 4 401 5.3E-164 T 14-10-2018 Tlie_0870 3f047eb3ce2629ab46d718d16804f932 410 SMART SM00997 181 342 4.0E-103 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tlie_0870 3f047eb3ce2629ab46d718d16804f932 410 SMART SM00996 4 410 4.4E-116 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tlie_0863 5fb42a2a586145ca1cdd6ea5a5d8405a 190 SUPERFAMILY SSF50249 69 129 9.42E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0863 5fb42a2a586145ca1cdd6ea5a5d8405a 190 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Tlie_0863 5fb42a2a586145ca1cdd6ea5a5d8405a 190 PIRSF PIRSF005901 3 189 2.1E-70 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP Tlie_0863 5fb42a2a586145ca1cdd6ea5a5d8405a 190 Gene3D G3DSA:2.40.50.140 68 130 1.7E-23 T 14-10-2018 Tlie_0863 5fb42a2a586145ca1cdd6ea5a5d8405a 190 Pfam PF09285 Elongation factor P, C-terminal 132 187 5.2E-26 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Tlie_0863 5fb42a2a586145ca1cdd6ea5a5d8405a 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 124 7.2E-22 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Tlie_0863 5fb42a2a586145ca1cdd6ea5a5d8405a 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 63 1.6E-21 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like Tlie_0863 5fb42a2a586145ca1cdd6ea5a5d8405a 190 Gene3D G3DSA:2.30.30.30 4 66 9.2E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Tlie_0863 5fb42a2a586145ca1cdd6ea5a5d8405a 190 SUPERFAMILY SSF50104 5 66 1.56E-16 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tlie_0863 5fb42a2a586145ca1cdd6ea5a5d8405a 190 Hamap MF_00141 Elongation factor P [efp]. 4 188 46.945 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Tlie_0863 5fb42a2a586145ca1cdd6ea5a5d8405a 190 SMART SM00841 132 187 3.0E-32 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Tlie_0863 5fb42a2a586145ca1cdd6ea5a5d8405a 190 SMART SM01185 70 124 9.2E-25 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Tlie_0863 5fb42a2a586145ca1cdd6ea5a5d8405a 190 TIGRFAM TIGR00038 efp: translation elongation factor P 6 188 6.6E-74 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Tlie_0863 5fb42a2a586145ca1cdd6ea5a5d8405a 190 Gene3D G3DSA:2.40.50.140 131 188 3.6E-27 T 14-10-2018 Tlie_0863 5fb42a2a586145ca1cdd6ea5a5d8405a 190 SUPERFAMILY SSF50249 132 188 1.03E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 Gene3D G3DSA:3.40.120.10 266 348 1.4E-54 T 14-10-2018 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 Gene3D G3DSA:3.40.120.10 9 164 1.4E-48 T 14-10-2018 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 243 258 5.3E-15 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 102 116 5.3E-15 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 183 202 5.3E-15 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 Gene3D G3DSA:3.40.120.10 185 371 1.4E-54 T 14-10-2018 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 10 140 1.1E-42 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 Gene3D G3DSA:3.30.310.50 379 456 2.0E-23 T 14-10-2018 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 386 450 1.7E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 11 450 5.5E-146 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 7.1E-26 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 SUPERFAMILY SSF55957 368 452 1.19E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 SUPERFAMILY SSF53738 267 374 6.28E-27 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 SUPERFAMILY SSF53738 8 190 5.49E-44 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 167 263 2.7E-13 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 7 453 38.182 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_0761 cb66db7b258a0b857bb7b796680d6e85 457 SUPERFAMILY SSF53738 167 265 3.69E-20 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_1259 f7d268b11b2c76f2c2fc93ee9802e997 235 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 169 233 3.1E-24 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain Tlie_1259 f7d268b11b2c76f2c2fc93ee9802e997 235 Pfam PF12836 Helix-hairpin-helix motif 170 232 7.8E-27 T 14-10-2018 Tlie_1259 f7d268b11b2c76f2c2fc93ee9802e997 235 Gene3D G3DSA:1.10.150.320 157 232 3.8E-27 T 14-10-2018 Tlie_1259 f7d268b11b2c76f2c2fc93ee9802e997 235 Pfam PF10531 SLBB domain 82 126 1.6E-11 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1259 f7d268b11b2c76f2c2fc93ee9802e997 235 Gene3D G3DSA:3.10.560.10 64 124 1.6E-7 T 14-10-2018 Tlie_1259 f7d268b11b2c76f2c2fc93ee9802e997 235 SMART SM00278 211 230 0.0022 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tlie_1259 f7d268b11b2c76f2c2fc93ee9802e997 235 SMART SM00278 181 200 1.2E-4 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tlie_1259 f7d268b11b2c76f2c2fc93ee9802e997 235 SUPERFAMILY SSF47781 164 234 1.56E-31 T 14-10-2018 IPR010994 RuvA domain 2-like Tlie_1508 cc8d0c1141d6bdbac69da9cc0df8ee08 153 Pfam PF01037 Lrp/AsnC ligand binding domain 85 144 4.2E-7 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Tlie_1508 cc8d0c1141d6bdbac69da9cc0df8ee08 153 Gene3D G3DSA:1.10.10.10 12 62 2.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1508 cc8d0c1141d6bdbac69da9cc0df8ee08 153 SUPERFAMILY SSF54909 74 148 1.3E-9 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Tlie_1508 cc8d0c1141d6bdbac69da9cc0df8ee08 153 Gene3D G3DSA:3.30.70.920 63 149 3.2E-14 T 14-10-2018 Tlie_1508 cc8d0c1141d6bdbac69da9cc0df8ee08 153 Pfam PF13404 AsnC-type helix-turn-helix domain 12 53 3.8E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Tlie_1508 cc8d0c1141d6bdbac69da9cc0df8ee08 153 SUPERFAMILY SSF46785 11 72 1.85E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1508 cc8d0c1141d6bdbac69da9cc0df8ee08 153 SMART SM00344 12 119 5.6E-31 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Tlie_1508 cc8d0c1141d6bdbac69da9cc0df8ee08 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Tlie_1508 cc8d0c1141d6bdbac69da9cc0df8ee08 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 5.1E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Tlie_1508 cc8d0c1141d6bdbac69da9cc0df8ee08 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 5.1E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Tlie_1508 cc8d0c1141d6bdbac69da9cc0df8ee08 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 5.1E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Tlie_1159 8d060a1acacf90f14447165414e25152 342 Gene3D G3DSA:3.30.360.10 158 319 9.3E-106 T 14-10-2018 Tlie_1159 8d060a1acacf90f14447165414e25152 342 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 203 225 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Tlie_1159 8d060a1acacf90f14447165414e25152 342 SUPERFAMILY SSF55347 158 316 2.75E-41 T 14-10-2018 Tlie_1159 8d060a1acacf90f14447165414e25152 342 PIRSF PIRSF036497 1 342 9.6E-88 T 14-10-2018 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Tlie_1159 8d060a1acacf90f14447165414e25152 342 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 7 150 2.7E-7 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Tlie_1159 8d060a1acacf90f14447165414e25152 342 Gene3D G3DSA:3.40.50.720 4 327 9.3E-106 T 14-10-2018 Tlie_1159 8d060a1acacf90f14447165414e25152 342 Pfam PF00742 Homoserine dehydrogenase 158 335 1.2E-54 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Tlie_1159 8d060a1acacf90f14447165414e25152 342 SUPERFAMILY SSF51735 1 179 6.97E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1809 49e20a7224afd676a576012ef2624e52 383 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 20 377 2.3E-97 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Tlie_1809 49e20a7224afd676a576012ef2624e52 383 PIRSF PIRSF000390 4 383 7.8E-108 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Tlie_1809 49e20a7224afd676a576012ef2624e52 383 Gene3D G3DSA:3.40.640.10 1 252 1.2E-86 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1809 49e20a7224afd676a576012ef2624e52 383 Gene3D G3DSA:3.90.1150.10 254 382 1.4E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1809 49e20a7224afd676a576012ef2624e52 383 SUPERFAMILY SSF53383 7 382 2.23E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1556 e9ae2d3038bbddbe3f737f864beb1a1f 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 276 1.3E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tlie_1556 e9ae2d3038bbddbe3f737f864beb1a1f 284 Gene3D G3DSA:1.10.3720.10 87 278 3.9E-34 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_1556 e9ae2d3038bbddbe3f737f864beb1a1f 284 SUPERFAMILY SSF161098 87 271 1.83E-40 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_0733 6c0f1edbb3508a9d508923e6ef6141ed 361 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 27 358 44.439 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Tlie_0733 6c0f1edbb3508a9d508923e6ef6141ed 361 SUPERFAMILY SSF46589 33 117 2.77E-19 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Tlie_0733 6c0f1edbb3508a9d508923e6ef6141ed 361 Pfam PF01409 tRNA synthetases class II core domain (F) 111 355 3.2E-97 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Tlie_0733 6c0f1edbb3508a9d508923e6ef6141ed 361 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 57 355 4.5E-98 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Tlie_0733 6c0f1edbb3508a9d508923e6ef6141ed 361 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 39 100 2.8E-23 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Tlie_0733 6c0f1edbb3508a9d508923e6ef6141ed 361 Gene3D G3DSA:3.30.930.10 28 356 1.6E-114 T 14-10-2018 Tlie_0733 6c0f1edbb3508a9d508923e6ef6141ed 361 SUPERFAMILY SSF55681 111 354 1.9E-76 T 14-10-2018 Tlie_1690 4f83c5e7e776a59c9978e6ba98f82951 109 Gene3D G3DSA:2.60.120.10 1 109 1.6E-28 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Tlie_1690 4f83c5e7e776a59c9978e6ba98f82951 109 SUPERFAMILY SSF51182 22 102 2.04E-20 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Tlie_1690 4f83c5e7e776a59c9978e6ba98f82951 109 Pfam PF07883 Cupin domain 35 97 3.3E-12 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Tlie_0072 dfce6b3a93c26daf53baf4eb8a09a535 268 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 67 80 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0072 dfce6b3a93c26daf53baf4eb8a09a535 268 PIRSF PIRSF000770 37 267 7.0E-33 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0072 dfce6b3a93c26daf53baf4eb8a09a535 268 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 40 260 1.3E-56 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Tlie_0072 dfce6b3a93c26daf53baf4eb8a09a535 268 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 230 256 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0072 dfce6b3a93c26daf53baf4eb8a09a535 268 Gene3D G3DSA:1.10.1740.10 24 110 6.3E-23 T 14-10-2018 Tlie_0072 dfce6b3a93c26daf53baf4eb8a09a535 268 Gene3D G3DSA:1.20.140.160 111 262 9.2E-34 T 14-10-2018 Tlie_0072 dfce6b3a93c26daf53baf4eb8a09a535 268 Pfam PF04545 Sigma-70, region 4 209 256 5.5E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Tlie_0072 dfce6b3a93c26daf53baf4eb8a09a535 268 SUPERFAMILY SSF88659 177 262 9.53E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tlie_0072 dfce6b3a93c26daf53baf4eb8a09a535 268 Pfam PF04542 Sigma-70 region 2 40 112 4.3E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tlie_0072 dfce6b3a93c26daf53baf4eb8a09a535 268 PRINTS PR00046 Major sigma-70 factor signature 245 256 3.4E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0072 dfce6b3a93c26daf53baf4eb8a09a535 268 PRINTS PR00046 Major sigma-70 factor signature 67 80 3.4E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0072 dfce6b3a93c26daf53baf4eb8a09a535 268 PRINTS PR00046 Major sigma-70 factor signature 230 245 3.4E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0072 dfce6b3a93c26daf53baf4eb8a09a535 268 PRINTS PR00046 Major sigma-70 factor signature 213 225 3.4E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0072 dfce6b3a93c26daf53baf4eb8a09a535 268 SUPERFAMILY SSF88946 31 112 1.88E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tlie_0072 dfce6b3a93c26daf53baf4eb8a09a535 268 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 37 260 2.4E-40 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tlie_1683 5ad5fcf20103bd8dda77ffc8ba3750a1 253 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 58 252 2.4E-62 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Tlie_1683 5ad5fcf20103bd8dda77ffc8ba3750a1 253 Gene3D G3DSA:3.90.850.10 35 253 4.8E-82 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Tlie_1683 5ad5fcf20103bd8dda77ffc8ba3750a1 253 SUPERFAMILY SSF56529 47 252 6.67E-77 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 822 20.018 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 SMART SM00958 228 341 1.9E-64 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 Gene3D G3DSA:3.90.1440.10 229 351 3.1E-178 T 14-10-2018 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 SMART SM00957 6 385 1.1E-270 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 Gene3D G3DSA:1.10.3060.10 615 822 2.9E-61 T 14-10-2018 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 SUPERFAMILY SSF52540 400 612 2.48E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 Pfam PF02810 SEC-C motif 876 894 5.0E-10 T 14-10-2018 IPR004027 SEC-C motif Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 Gene3D G3DSA:3.10.450.50 851 895 1.0E-8 T 14-10-2018 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 Pfam PF07516 SecA Wing and Scaffold domain 612 819 2.3E-59 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 ProSitePatterns PS01312 SecA family signature. 483 498 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 Pfam PF07517 SecA DEAD-like domain 11 385 2.7E-130 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 SUPERFAMILY SSF52540 12 398 5.69E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 Gene3D G3DSA:3.40.50.300 400 613 2.0E-94 T 14-10-2018 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 807 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 SUPERFAMILY SSF81767 227 351 1.29E-43 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 Pfam PF01043 SecA preprotein cross-linking domain 233 341 7.3E-40 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 SUPERFAMILY SSF81886 614 884 2.35E-67 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 Gene3D G3DSA:3.40.50.300 22 398 3.1E-178 T 14-10-2018 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 PRINTS PR00906 SecA protein signature 63 87 1.2E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 PRINTS PR00906 SecA protein signature 359 376 1.2E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 PRINTS PR00906 SecA protein signature 101 115 1.2E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 PRINTS PR00906 SecA protein signature 117 127 1.2E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 PRINTS PR00906 SecA protein signature 170 190 1.2E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 PRINTS PR00906 SecA protein signature 396 409 1.2E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tlie_1329 746cf5b2c3a161fc0a295603b698b152 895 PRINTS PR00906 SecA protein signature 322 344 1.2E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tlie_0539 8fb5c0b830fb77d78176813dff898405 302 SUPERFAMILY SSF53067 5 127 3.67E-18 T 14-10-2018 Tlie_0539 8fb5c0b830fb77d78176813dff898405 302 Pfam PF02541 Ppx/GppA phosphatase family 51 279 4.4E-26 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Tlie_0539 8fb5c0b830fb77d78176813dff898405 302 Gene3D G3DSA:3.30.420.40 2 126 1.0E-18 T 14-10-2018 Tlie_0539 8fb5c0b830fb77d78176813dff898405 302 Gene3D G3DSA:3.30.420.150 130 292 8.2E-28 T 14-10-2018 Tlie_0539 8fb5c0b830fb77d78176813dff898405 302 SUPERFAMILY SSF53067 132 283 3.75E-23 T 14-10-2018 Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 TIGRFAM TIGR01069 mutS2: MutS2 family protein 6 781 1.8E-172 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 Gene3D G3DSA:3.40.50.300 293 597 4.7E-74 T 14-10-2018 Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 SMART SM00534 326 511 2.5E-57 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 SUPERFAMILY SSF52540 290 510 3.18E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 SUPERFAMILY SSF48334 23 286 1.44E-15 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 Gene3D G3DSA:1.10.1420.10 146 226 1.8E-5 T 14-10-2018 Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 SMART SM00463 704 782 6.5E-13 T 14-10-2018 IPR002625 Smr domain Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 SMART SM00533 11 314 4.8E-7 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 PIRSF PIRSF005814 1 782 6.3E-199 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 Gene3D G3DSA:3.30.1370.110 697 782 4.1E-21 T 14-10-2018 Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 408 424 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 Pfam PF00488 MutS domain V 329 510 1.9E-29 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 Pfam PF01713 Smr domain 709 782 1.2E-16 T 14-10-2018 IPR002625 Smr domain Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 4 781 18.031 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 SUPERFAMILY SSF160443 709 781 5.1E-8 T 14-10-2018 IPR036063 Smr domain superfamily Tlie_0738 0e5a8622cb8fb917cda107814cf6d2e2 782 Gene3D G3DSA:1.10.1420.10 23 281 1.8E-5 T 14-10-2018 Tlie_0949 bb85e4eb7c5ec7cfd48cc1987b11469e 223 Pfam PF00814 Glycoprotease family 34 155 1.9E-18 T 14-10-2018 IPR000905 Gcp-like domain Tlie_0949 bb85e4eb7c5ec7cfd48cc1987b11469e 223 Gene3D G3DSA:3.30.420.40 5 217 6.2E-30 T 14-10-2018 Tlie_0949 bb85e4eb7c5ec7cfd48cc1987b11469e 223 Gene3D G3DSA:3.30.420.40 96 187 6.2E-30 T 14-10-2018 Tlie_0949 bb85e4eb7c5ec7cfd48cc1987b11469e 223 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 7 216 1.3E-31 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Tlie_0949 bb85e4eb7c5ec7cfd48cc1987b11469e 223 SUPERFAMILY SSF53067 4 104 1.64E-20 T 14-10-2018 Tlie_0394 cc730f3f70cf7ddfe41661dd21d4773f 210 Pfam PF02666 Phosphatidylserine decarboxylase 38 200 1.7E-29 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Tlie_0394 cc730f3f70cf7ddfe41661dd21d4773f 210 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 14 203 2.3E-54 T 14-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Tlie_0394 cc730f3f70cf7ddfe41661dd21d4773f 210 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 2 205 31.224 T 14-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Tlie_0697 74d56b257b8d86b412ab67f454489a99 165 SUPERFAMILY SSF103165 5 164 2.09E-70 T 14-10-2018 IPR036902 Ta1353-like superfamily Tlie_0697 74d56b257b8d86b412ab67f454489a99 165 Pfam PF04008 Adenosine specific kinase 10 164 6.0E-75 T 14-10-2018 IPR007153 Adenosine specific kinase Tlie_0697 74d56b257b8d86b412ab67f454489a99 165 Gene3D G3DSA:3.40.1520.10 1 165 1.1E-76 T 14-10-2018 IPR036902 Ta1353-like superfamily Tlie_0252 0f6665e00125ea97987811c1d2654907 113 SUPERFAMILY SSF75169 5 97 3.87E-13 T 14-10-2018 IPR027396 DsrEFH-like Tlie_0252 0f6665e00125ea97987811c1d2654907 113 Gene3D G3DSA:3.40.1260.10 2 113 4.4E-46 T 14-10-2018 IPR027396 DsrEFH-like Tlie_0252 0f6665e00125ea97987811c1d2654907 113 Pfam PF02635 DsrE/DsrF-like family 10 112 1.3E-7 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Tlie_1647 a033cfbe06ac504454e0a5b88fd8adca 321 Pfam PF16916 Dimerisation domain of Zinc Transporter 227 304 5.0E-22 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Tlie_1647 a033cfbe06ac504454e0a5b88fd8adca 321 SUPERFAMILY SSF161111 16 224 2.88E-51 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Tlie_1647 a033cfbe06ac504454e0a5b88fd8adca 321 Gene3D G3DSA:1.20.1510.10 19 223 7.7E-59 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Tlie_1647 a033cfbe06ac504454e0a5b88fd8adca 321 Gene3D G3DSA:3.30.70.1350 224 306 1.7E-20 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Tlie_1647 a033cfbe06ac504454e0a5b88fd8adca 321 Pfam PF01545 Cation efflux family 24 223 2.1E-47 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Tlie_1647 a033cfbe06ac504454e0a5b88fd8adca 321 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 21 305 1.9E-67 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Tlie_1647 a033cfbe06ac504454e0a5b88fd8adca 321 SUPERFAMILY SSF160240 226 306 6.02E-20 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Tlie_0809 b6dadb785e75045da2bb366442525e38 426 Pfam PF01479 S4 domain 362 404 6.9E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0809 b6dadb785e75045da2bb366442525e38 426 SMART SM00363 360 417 8.0E-4 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0809 b6dadb785e75045da2bb366442525e38 426 SUPERFAMILY SSF52374 4 327 8.75E-102 T 14-10-2018 Tlie_0809 b6dadb785e75045da2bb366442525e38 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 3.5E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Tlie_0809 b6dadb785e75045da2bb366442525e38 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 3.5E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Tlie_0809 b6dadb785e75045da2bb366442525e38 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 3.5E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Tlie_0809 b6dadb785e75045da2bb366442525e38 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 220 232 3.5E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Tlie_0809 b6dadb785e75045da2bb366442525e38 426 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0809 b6dadb785e75045da2bb366442525e38 426 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 421 7.8E-122 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Tlie_0809 b6dadb785e75045da2bb366442525e38 426 Gene3D G3DSA:1.10.240.10 227 331 5.8E-41 T 14-10-2018 Tlie_0809 b6dadb785e75045da2bb366442525e38 426 SUPERFAMILY SSF55174 333 422 1.7E-17 T 14-10-2018 Tlie_0809 b6dadb785e75045da2bb366442525e38 426 Gene3D G3DSA:3.10.290.10 332 425 1.2E-25 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tlie_0809 b6dadb785e75045da2bb366442525e38 426 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 3 425 43.589 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 Tlie_0809 b6dadb785e75045da2bb366442525e38 426 Gene3D G3DSA:3.40.50.620 1 226 6.3E-87 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_0809 b6dadb785e75045da2bb366442525e38 426 Pfam PF00579 tRNA synthetases class I (W and Y) 33 327 2.4E-83 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0673 09b90e016a40b4bb7c1f2a4ea54981a4 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 3.6E-58 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0673 09b90e016a40b4bb7c1f2a4ea54981a4 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 33.531 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Tlie_0673 09b90e016a40b4bb7c1f2a4ea54981a4 130 Pfam PF00411 Ribosomal protein S11 20 129 7.4E-49 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Tlie_0673 09b90e016a40b4bb7c1f2a4ea54981a4 130 PIRSF PIRSF002131 1 130 1.3E-53 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Tlie_0673 09b90e016a40b4bb7c1f2a4ea54981a4 130 SUPERFAMILY SSF53137 15 130 2.09E-49 T 14-10-2018 Tlie_0673 09b90e016a40b4bb7c1f2a4ea54981a4 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site Tlie_0673 09b90e016a40b4bb7c1f2a4ea54981a4 130 Gene3D G3DSA:3.30.420.80 2 130 2.6E-55 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Tlie_0105 98ef7fb92472d75f14d2111950324e8c 326 Gene3D G3DSA:3.40.1550.10 42 228 1.0E-53 T 14-10-2018 IPR028976 CheC-like superfamily Tlie_0105 98ef7fb92472d75f14d2111950324e8c 326 PRINTS PR00955 Flagellar motor switch protein FliM signature 87 103 7.8E-23 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tlie_0105 98ef7fb92472d75f14d2111950324e8c 326 PRINTS PR00955 Flagellar motor switch protein FliM signature 112 131 7.8E-23 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tlie_0105 98ef7fb92472d75f14d2111950324e8c 326 PRINTS PR00955 Flagellar motor switch protein FliM signature 209 227 7.8E-23 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tlie_0105 98ef7fb92472d75f14d2111950324e8c 326 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 7.8E-23 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tlie_0105 98ef7fb92472d75f14d2111950324e8c 326 SUPERFAMILY SSF103039 42 227 6.19E-21 T 14-10-2018 IPR028976 CheC-like superfamily Tlie_0105 98ef7fb92472d75f14d2111950324e8c 326 PIRSF PIRSF002888 2 326 2.6E-90 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tlie_0105 98ef7fb92472d75f14d2111950324e8c 326 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 321 7.1E-15 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) Tlie_0105 98ef7fb92472d75f14d2111950324e8c 326 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 319 2.7E-92 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tlie_0105 98ef7fb92472d75f14d2111950324e8c 326 SUPERFAMILY SSF101801 248 324 1.83E-12 T 14-10-2018 IPR036429 SpoA-like superfamily Tlie_0105 98ef7fb92472d75f14d2111950324e8c 326 Pfam PF02154 Flagellar motor switch protein FliM 36 226 5.9E-61 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tlie_0562 f935e4d96317b165e56b0225daf6a3c0 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 377 4.7E-121 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Tlie_0562 f935e4d96317b165e56b0225daf6a3c0 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Tlie_0562 f935e4d96317b165e56b0225daf6a3c0 387 Gene3D G3DSA:1.20.1090.10 184 386 8.6E-69 T 14-10-2018 Tlie_0562 f935e4d96317b165e56b0225daf6a3c0 387 SUPERFAMILY SSF56796 5 386 9.68E-127 T 14-10-2018 Tlie_0562 f935e4d96317b165e56b0225daf6a3c0 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Tlie_0562 f935e4d96317b165e56b0225daf6a3c0 387 Gene3D G3DSA:3.40.50.1970 1 183 3.1E-60 T 14-10-2018 Tlie_0637 955893b5bfc17068839745d0200fc3d4 327 Gene3D G3DSA:3.90.870.10 2 211 4.1E-82 T 14-10-2018 Tlie_0637 955893b5bfc17068839745d0200fc3d4 327 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 10 206 1.7E-67 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 Tlie_0637 955893b5bfc17068839745d0200fc3d4 327 PIRSF PIRSF004930 1 327 8.2E-114 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 Tlie_0637 955893b5bfc17068839745d0200fc3d4 327 Gene3D G3DSA:3.40.50.11030 212 327 1.0E-17 T 14-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily Tlie_0637 955893b5bfc17068839745d0200fc3d4 327 Pfam PF03481 Putative GTP-binding controlling metal-binding 203 326 1.4E-18 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain Tlie_0637 955893b5bfc17068839745d0200fc3d4 327 SUPERFAMILY SSF55821 6 209 4.58E-68 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Tlie_0637 955893b5bfc17068839745d0200fc3d4 327 Pfam PF01300 Telomere recombination 23 198 2.7E-58 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 Tlie_0030 9062a45fdf956ba878d65b6bc03e1d22 170 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 40 168 1.2E-30 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Tlie_0240 37d86d88a75cc9956e71c50ff96514cf 256 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 57 252 6.3E-25 T 14-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Tlie_0240 37d86d88a75cc9956e71c50ff96514cf 256 Pfam PF01881 CRISPR associated protein Cas6 105 253 5.6E-32 T 14-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Tlie_0240 37d86d88a75cc9956e71c50ff96514cf 256 Gene3D G3DSA:3.30.70.1890 2 129 1.5E-13 T 14-10-2018 Tlie_0240 37d86d88a75cc9956e71c50ff96514cf 256 Gene3D G3DSA:3.30.70.1900 135 255 4.0E-29 T 14-10-2018 Tlie_0240 37d86d88a75cc9956e71c50ff96514cf 256 PIRSF PIRSF005054 4 256 1.6E-45 T 14-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Tlie_0657 e15dd5314e3ce789b6b7e20e490d9e83 108 ProSitePatterns PS01108 Ribosomal protein L24 signature. 9 26 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0657 e15dd5314e3ce789b6b7e20e490d9e83 108 Gene3D G3DSA:2.30.30.30 1 104 2.0E-43 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Tlie_0657 e15dd5314e3ce789b6b7e20e490d9e83 108 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 99 21.423 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0657 e15dd5314e3ce789b6b7e20e490d9e83 108 SUPERFAMILY SSF50104 2 104 8.17E-39 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tlie_0657 e15dd5314e3ce789b6b7e20e490d9e83 108 Pfam PF00467 KOW motif 8 39 1.8E-9 T 14-10-2018 IPR005824 KOW Tlie_0657 e15dd5314e3ce789b6b7e20e490d9e83 108 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 105 5.5E-39 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0657 e15dd5314e3ce789b6b7e20e490d9e83 108 SMART SM00739 5 32 7.6E-8 T 14-10-2018 IPR005824 KOW Tlie_0657 e15dd5314e3ce789b6b7e20e490d9e83 108 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 41 105 3.6E-30 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0093 8de038553cc66ff604d2cd1f54bcec47 276 PRINTS PR00996 Glutamate methyltransferase family signature 136 152 5.0E-32 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tlie_0093 8de038553cc66ff604d2cd1f54bcec47 276 PRINTS PR00996 Glutamate methyltransferase family signature 222 245 5.0E-32 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tlie_0093 8de038553cc66ff604d2cd1f54bcec47 276 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 5.0E-32 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tlie_0093 8de038553cc66ff604d2cd1f54bcec47 276 PRINTS PR00996 Glutamate methyltransferase family signature 203 217 5.0E-32 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tlie_0093 8de038553cc66ff604d2cd1f54bcec47 276 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 5.0E-32 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tlie_0093 8de038553cc66ff604d2cd1f54bcec47 276 PRINTS PR00996 Glutamate methyltransferase family signature 67 79 5.0E-32 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tlie_0093 8de038553cc66ff604d2cd1f54bcec47 276 Pfam PF03705 CheR methyltransferase, all-alpha domain 11 60 2.2E-13 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Tlie_0093 8de038553cc66ff604d2cd1f54bcec47 276 Gene3D G3DSA:1.10.155.10 4 72 1.4E-5 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Tlie_0093 8de038553cc66ff604d2cd1f54bcec47 276 Pfam PF01739 CheR methyltransferase, SAM binding domain 74 250 5.6E-55 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Tlie_0093 8de038553cc66ff604d2cd1f54bcec47 276 Gene3D G3DSA:3.40.50.150 73 264 2.9E-61 T 14-10-2018 Tlie_0093 8de038553cc66ff604d2cd1f54bcec47 276 SUPERFAMILY SSF53335 74 255 2.04E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_0093 8de038553cc66ff604d2cd1f54bcec47 276 SUPERFAMILY SSF47757 9 73 3.4E-12 T 14-10-2018 Tlie_0093 8de038553cc66ff604d2cd1f54bcec47 276 SMART SM00138 9 264 4.5E-80 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tlie_0645 6d26de2757d736eaa769bd4020e064fb 101 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 2 101 27.491 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0645 6d26de2757d736eaa769bd4020e064fb 101 ProSitePatterns PS00361 Ribosomal protein S10 signature. 28 43 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0645 6d26de2757d736eaa769bd4020e064fb 101 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 3 100 4.2E-46 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0645 6d26de2757d736eaa769bd4020e064fb 101 Pfam PF00338 Ribosomal protein S10p/S20e 6 100 1.2E-36 T 14-10-2018 IPR027486 Ribosomal protein S10 domain Tlie_0645 6d26de2757d736eaa769bd4020e064fb 101 SMART SM01403 6 100 1.3E-57 T 14-10-2018 IPR027486 Ribosomal protein S10 domain Tlie_0645 6d26de2757d736eaa769bd4020e064fb 101 PRINTS PR00971 Ribosomal protein S10 family signature 39 54 1.2E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0645 6d26de2757d736eaa769bd4020e064fb 101 PRINTS PR00971 Ribosomal protein S10 family signature 4 17 1.2E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0645 6d26de2757d736eaa769bd4020e064fb 101 PRINTS PR00971 Ribosomal protein S10 family signature 60 74 1.2E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0645 6d26de2757d736eaa769bd4020e064fb 101 SUPERFAMILY SSF54999 4 101 4.97E-39 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Tlie_0645 6d26de2757d736eaa769bd4020e064fb 101 Gene3D G3DSA:3.30.70.600 2 101 2.7E-39 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Tlie_1114 9fb799d4fa8ea033b9f32d7710ad4120 190 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 4 188 1.3E-62 T 14-10-2018 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 Tlie_1114 9fb799d4fa8ea033b9f32d7710ad4120 190 SUPERFAMILY SSF53323 4 188 1.09E-44 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tlie_1114 9fb799d4fa8ea033b9f32d7710ad4120 190 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 13 185 2.0E-35 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Tlie_1114 9fb799d4fa8ea033b9f32d7710ad4120 190 Gene3D G3DSA:3.40.920.10 2 189 1.6E-64 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tlie_1237 e50a418cc4cd1b4bbc40124e06e9a29a 246 Pfam PF00483 Nucleotidyl transferase 6 234 3.3E-23 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Tlie_1237 e50a418cc4cd1b4bbc40124e06e9a29a 246 Gene3D G3DSA:3.90.550.10 3 237 2.9E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_1237 e50a418cc4cd1b4bbc40124e06e9a29a 246 SUPERFAMILY SSF53448 5 236 1.21E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_0185 3ba576050ac3fc8cedac524c47319a5a 385 Pfam PF00155 Aminotransferase class I and II 27 376 4.3E-62 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tlie_0185 3ba576050ac3fc8cedac524c47319a5a 385 Gene3D G3DSA:3.40.640.10 58 278 5.0E-126 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0185 3ba576050ac3fc8cedac524c47319a5a 385 Gene3D G3DSA:3.90.1150.10 22 375 5.0E-126 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_0185 3ba576050ac3fc8cedac524c47319a5a 385 SUPERFAMILY SSF53383 3 382 2.69E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0185 3ba576050ac3fc8cedac524c47319a5a 385 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 228 241 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 SMART SM00838 410 498 0.0019 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 SUPERFAMILY SSF52540 3 209 1.95E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 Gene3D G3DSA:2.40.50.250 497 613 2.3E-122 T 14-10-2018 Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 SUPERFAMILY SSF54980 317 401 4.75E-12 T 14-10-2018 IPR035647 EF-G domain III/V-like Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 Gene3D G3DSA:3.30.70.240 403 496 2.3E-122 T 14-10-2018 Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 141 5.2E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 SUPERFAMILY SSF54980 413 527 1.1E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 SUPERFAMILY SSF50447 183 306 3.3E-27 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 Pfam PF03144 Elongation factor Tu domain 2 221 301 4.2E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 Gene3D G3DSA:2.40.30.10 201 312 5.8E-25 T 14-10-2018 Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 PRINTS PR00315 GTP-binding elongation factor signature 53 61 3.3E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 PRINTS PR00315 GTP-binding elongation factor signature 9 22 3.3E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 PRINTS PR00315 GTP-binding elongation factor signature 73 83 3.3E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 PRINTS PR00315 GTP-binding elongation factor signature 89 100 3.3E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 PRINTS PR00315 GTP-binding elongation factor signature 125 134 3.3E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 613 7.5E-249 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 Pfam PF00679 Elongation factor G C-terminus 411 494 2.7E-22 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 Pfam PF00009 Elongation factor Tu GTP binding domain 6 197 3.1E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 Gene3D G3DSA:3.40.50.300 4 200 1.0E-62 T 14-10-2018 Tlie_1593 3266c7b220eaf1cd49d69d1f0cca76b8 625 Gene3D G3DSA:3.30.70.870 320 604 2.3E-122 T 14-10-2018 Tlie_0964 883708dcc34338bf75fc339af6497a62 337 Gene3D G3DSA:1.20.1690.10 184 294 2.5E-43 T 14-10-2018 IPR035067 V-type ATPase subunit c Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0964 883708dcc34338bf75fc339af6497a62 337 Gene3D G3DSA:1.20.1690.10 82 183 2.5E-43 T 14-10-2018 IPR035067 V-type ATPase subunit c Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0964 883708dcc34338bf75fc339af6497a62 337 Pfam PF01992 ATP synthase (C/AC39) subunit 11 330 1.1E-51 T 14-10-2018 IPR002843 ATPase, V0 complex, c/d subunit Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0964 883708dcc34338bf75fc339af6497a62 337 SUPERFAMILY SSF103486 7 334 2.48E-42 T 14-10-2018 IPR036079 V-type ATP synthase subunit C-like Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0964 883708dcc34338bf75fc339af6497a62 337 Gene3D G3DSA:1.10.132.50 7 327 2.5E-43 T 14-10-2018 Tlie_1555 304f807d8b89d3486ec83e052d93e9c3 335 SMART SM00450 187 306 8.1E-20 T 14-10-2018 IPR001763 Rhodanese-like domain Tlie_1555 304f807d8b89d3486ec83e052d93e9c3 335 SMART SM00450 45 165 2.6E-18 T 14-10-2018 IPR001763 Rhodanese-like domain Tlie_1555 304f807d8b89d3486ec83e052d93e9c3 335 Gene3D G3DSA:3.40.250.10 33 183 3.1E-34 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Tlie_1555 304f807d8b89d3486ec83e052d93e9c3 335 Gene3D G3DSA:3.40.250.10 188 319 1.3E-33 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Tlie_1555 304f807d8b89d3486ec83e052d93e9c3 335 SUPERFAMILY SSF52821 187 311 3.27E-35 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Tlie_1555 304f807d8b89d3486ec83e052d93e9c3 335 Pfam PF00581 Rhodanese-like domain 192 301 1.5E-16 T 14-10-2018 IPR001763 Rhodanese-like domain Tlie_1555 304f807d8b89d3486ec83e052d93e9c3 335 Pfam PF00581 Rhodanese-like domain 48 162 5.0E-18 T 14-10-2018 IPR001763 Rhodanese-like domain Tlie_1555 304f807d8b89d3486ec83e052d93e9c3 335 SUPERFAMILY SSF52821 44 173 5.5E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Tlie_1346 dc73f473638de8c4aec0f1ecfead9462 442 Gene3D G3DSA:3.80.30.20 149 382 1.4E-76 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tlie_1346 dc73f473638de8c4aec0f1ecfead9462 442 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 155 175 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Tlie_1346 dc73f473638de8c4aec0f1ecfead9462 442 Gene3D G3DSA:3.40.50.12160 9 136 1.0E-18 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Tlie_1346 dc73f473638de8c4aec0f1ecfead9462 442 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 10 436 4.8E-117 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Tlie_1346 dc73f473638de8c4aec0f1ecfead9462 442 SMART SM00729 151 366 4.9E-52 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tlie_1346 dc73f473638de8c4aec0f1ecfead9462 442 Pfam PF04055 Radical SAM superfamily 156 325 8.4E-23 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_1346 dc73f473638de8c4aec0f1ecfead9462 442 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 13 424 3.8E-122 T 14-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 Tlie_1346 dc73f473638de8c4aec0f1ecfead9462 442 Pfam PF00919 Uncharacterized protein family UPF0004 10 98 1.4E-19 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Tlie_1346 dc73f473638de8c4aec0f1ecfead9462 442 SUPERFAMILY SSF102114 132 371 3.4E-54 T 14-10-2018 Tlie_0940 b184fdc33cba8dda7771ae33c0fa515b 467 Pfam PF01171 PP-loop family 31 208 2.2E-51 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Tlie_0940 b184fdc33cba8dda7771ae33c0fa515b 467 SUPERFAMILY SSF52402 10 217 1.41E-53 T 14-10-2018 Tlie_0940 b184fdc33cba8dda7771ae33c0fa515b 467 Gene3D G3DSA:3.40.50.620 10 218 5.2E-64 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_0940 b184fdc33cba8dda7771ae33c0fa515b 467 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 12 347 23.791 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Tlie_0940 b184fdc33cba8dda7771ae33c0fa515b 467 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 31 212 6.1E-55 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 641 1.4E-208 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 SUPERFAMILY SSF47323 652 929 2.06E-69 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 SUPERFAMILY SSF52374 4 649 4.83E-158 T 14-10-2018 Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 Pfam PF08264 Anticodon-binding domain of tRNA 685 843 5.1E-34 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 527 540 2.6E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 235 258 2.6E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 2.6E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 398 413 2.6E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 2.6E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 Gene3D G3DSA:3.90.740.10 196 405 8.8E-255 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 Gene3D G3DSA:1.10.730.20 640 929 3.1E-94 T 14-10-2018 Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 928 20.56 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 Gene3D G3DSA:3.40.50.620 26 629 8.8E-255 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 16 841 1.3E-301 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tlie_0933 541d4ad5a0c5c344e574d3741381def4 930 SUPERFAMILY SSF50677 205 400 2.72E-50 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tlie_1826 7138e574d36747b2bcf114268b462b62 438 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 215 305 1.7E-29 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tlie_1826 7138e574d36747b2bcf114268b462b62 438 SUPERFAMILY SSF48179 214 311 6.8E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tlie_1826 7138e574d36747b2bcf114268b462b62 438 Gene3D G3DSA:3.40.50.720 213 435 1.7E-63 T 14-10-2018 Tlie_1826 7138e574d36747b2bcf114268b462b62 438 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 19 423 2.6E-126 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Tlie_1826 7138e574d36747b2bcf114268b462b62 438 Gene3D G3DSA:3.40.50.720 2 211 2.3E-64 T 14-10-2018 Tlie_1826 7138e574d36747b2bcf114268b462b62 438 PIRSF PIRSF500136 7 437 1.8E-159 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 Tlie_1826 7138e574d36747b2bcf114268b462b62 438 SUPERFAMILY SSF52413 318 425 3.92E-24 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Tlie_1826 7138e574d36747b2bcf114268b462b62 438 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 19 197 1.0E-42 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tlie_1826 7138e574d36747b2bcf114268b462b62 438 PIRSF PIRSF000124 18 432 2.0E-60 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Tlie_1826 7138e574d36747b2bcf114268b462b62 438 SMART SM00984 332 427 4.1E-28 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tlie_1826 7138e574d36747b2bcf114268b462b62 438 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 332 425 5.4E-21 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tlie_1826 7138e574d36747b2bcf114268b462b62 438 SUPERFAMILY SSF51735 19 208 2.12E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1260 b467f9cb3997a60bbd3cdac7c3ccb965 441 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Tlie_1260 b467f9cb3997a60bbd3cdac7c3ccb965 441 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 434 4.3E-137 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Tlie_1260 b467f9cb3997a60bbd3cdac7c3ccb965 441 Pfam PF01938 TRAM domain 376 436 2.2E-11 T 14-10-2018 IPR002792 TRAM domain Tlie_1260 b467f9cb3997a60bbd3cdac7c3ccb965 441 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 438 60.119 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Tlie_1260 b467f9cb3997a60bbd3cdac7c3ccb965 441 Pfam PF00919 Uncharacterized protein family UPF0004 4 102 3.8E-25 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Tlie_1260 b467f9cb3997a60bbd3cdac7c3ccb965 441 Gene3D G3DSA:3.40.50.12160 3 132 2.5E-27 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Tlie_1260 b467f9cb3997a60bbd3cdac7c3ccb965 441 Pfam PF04055 Radical SAM superfamily 150 320 1.1E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_1260 b467f9cb3997a60bbd3cdac7c3ccb965 441 SUPERFAMILY SSF102114 141 372 3.53E-61 T 14-10-2018 Tlie_1260 b467f9cb3997a60bbd3cdac7c3ccb965 441 Gene3D G3DSA:3.80.30.20 144 377 3.5E-89 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tlie_1260 b467f9cb3997a60bbd3cdac7c3ccb965 441 SMART SM00729 146 364 3.0E-58 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tlie_1260 b467f9cb3997a60bbd3cdac7c3ccb965 441 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 436 8.0E-133 T 14-10-2018 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 132 152 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 Gene3D G3DSA:3.50.50.60 7 300 2.1E-117 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 289 3.3E-55 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 Gene3D G3DSA:3.50.50.60 119 241 2.1E-117 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 5 301 3.6E-118 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 SUPERFAMILY SSF51905 2 299 1.45E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 1.5E-38 T 14-10-2018 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 1.5E-38 T 14-10-2018 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 276 1.5E-38 T 14-10-2018 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.5E-38 T 14-10-2018 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.5E-38 T 14-10-2018 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 230 251 4.8E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 38 53 4.8E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 192 208 4.8E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 125 137 4.8E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 140 164 4.8E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 103 111 4.8E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 264 282 4.8E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 58 68 4.8E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tlie_0748 f0fcf8f902a1b359b485e2257a4328ee 396 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 4.8E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tlie_0225 0b28e54f694a1e812cd010616bf9b84f 401 ProSitePatterns PS00201 Flavodoxin signature. 259 275 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Tlie_0225 0b28e54f694a1e812cd010616bf9b84f 401 SMART SM00849 37 228 4.5E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tlie_0225 0b28e54f694a1e812cd010616bf9b84f 401 SUPERFAMILY SSF56281 14 285 5.9E-40 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_0225 0b28e54f694a1e812cd010616bf9b84f 401 SUPERFAMILY SSF52218 256 398 3.44E-36 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tlie_0225 0b28e54f694a1e812cd010616bf9b84f 401 PIRSF PIRSF005243 2 401 3.1E-128 T 14-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 Tlie_0225 0b28e54f694a1e812cd010616bf9b84f 401 Gene3D G3DSA:3.40.50.360 255 401 7.4E-38 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tlie_0225 0b28e54f694a1e812cd010616bf9b84f 401 Pfam PF00258 Flavodoxin 259 382 3.8E-11 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Tlie_0225 0b28e54f694a1e812cd010616bf9b84f 401 Gene3D G3DSA:3.60.15.10 5 250 2.4E-82 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_1244 95b2bf4173bfc470dca46a2cae7ddfe7 281 Gene3D G3DSA:3.40.50.620 2 177 3.2E-78 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1244 95b2bf4173bfc470dca46a2cae7ddfe7 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 279 8.6E-110 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Tlie_1244 95b2bf4173bfc470dca46a2cae7ddfe7 281 Pfam PF02569 Pantoate-beta-alanine ligase 2 277 1.0E-107 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Tlie_1244 95b2bf4173bfc470dca46a2cae7ddfe7 281 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 40.595 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Tlie_1244 95b2bf4173bfc470dca46a2cae7ddfe7 281 SUPERFAMILY SSF52374 1 279 1.82E-109 T 14-10-2018 Tlie_1244 95b2bf4173bfc470dca46a2cae7ddfe7 281 Gene3D G3DSA:3.30.1300.10 178 277 3.7E-33 T 14-10-2018 Tlie_0082 347d24573fb5992f4b746a217c46e413 239 Pfam PF00691 OmpA family 127 226 4.0E-19 T 14-10-2018 IPR006665 OmpA-like domain Tlie_0082 347d24573fb5992f4b746a217c46e413 239 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 54 3.6E-19 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain Tlie_0082 347d24573fb5992f4b746a217c46e413 239 Gene3D G3DSA:3.30.1330.60 75 237 9.2E-44 T 14-10-2018 IPR036737 OmpA-like domain superfamily Tlie_0082 347d24573fb5992f4b746a217c46e413 239 SUPERFAMILY SSF103088 116 232 1.7E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily Tlie_0431 3762a721e0ba34d3e96d9414f45404e5 143 Pfam PF00572 Ribosomal protein L13 17 139 5.7E-52 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Tlie_0431 3762a721e0ba34d3e96d9414f45404e5 143 PIRSF PIRSF002181 1 143 1.2E-46 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Tlie_0431 3762a721e0ba34d3e96d9414f45404e5 143 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 142 1.3E-56 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0431 3762a721e0ba34d3e96d9414f45404e5 143 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 18 142 26.072 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Tlie_0431 3762a721e0ba34d3e96d9414f45404e5 143 Gene3D G3DSA:3.90.1180.10 4 143 7.0E-58 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Tlie_0431 3762a721e0ba34d3e96d9414f45404e5 143 SUPERFAMILY SSF52161 5 140 1.83E-55 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Tlie_0297 b3cfc00129862c396b5639e88b8b6fac 277 SUPERFAMILY SSF52218 3 118 1.71E-19 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tlie_0297 b3cfc00129862c396b5639e88b8b6fac 277 Pfam PF12724 Flavodoxin domain 5 90 1.1E-7 T 14-10-2018 IPR026816 Flavodoxin domain Tlie_0297 b3cfc00129862c396b5639e88b8b6fac 277 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Tlie_0297 b3cfc00129862c396b5639e88b8b6fac 277 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 202 213 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_0297 b3cfc00129862c396b5639e88b8b6fac 277 SUPERFAMILY SSF54862 193 253 4.89E-18 T 14-10-2018 Tlie_0297 b3cfc00129862c396b5639e88b8b6fac 277 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 232 243 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_0297 b3cfc00129862c396b5639e88b8b6fac 277 Gene3D G3DSA:3.30.70.20 192 254 2.7E-13 T 14-10-2018 Tlie_0297 b3cfc00129862c396b5639e88b8b6fac 277 Pfam PF14697 4Fe-4S dicluster domain 197 247 4.1E-9 T 14-10-2018 Tlie_0297 b3cfc00129862c396b5639e88b8b6fac 277 Gene3D G3DSA:3.40.50.360 3 129 2.3E-19 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 Gene3D G3DSA:1.10.150.20 511 592 2.2E-29 T 14-10-2018 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 SMART SM00532 5 446 5.8E-263 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 SMART SM00292 599 676 4.8E-16 T 14-10-2018 IPR001357 BRCT domain Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 Hamap MF_01588 DNA ligase [ligA]. 4 673 51.215 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 Gene3D G3DSA:1.10.287.610 1 72 7.3E-31 T 14-10-2018 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 Gene3D G3DSA:3.40.50.10190 598 679 5.5E-29 T 14-10-2018 IPR036420 BRCT domain superfamily Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 Pfam PF12826 Helix-hairpin-helix motif 517 579 1.1E-23 T 14-10-2018 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 SMART SM00278 444 463 670.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 SMART SM00278 518 537 260.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 SMART SM00278 550 569 0.24 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 432 2.3E-10 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 Gene3D G3DSA:2.20.70.80 391 427 4.1E-12 T 14-10-2018 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 330 345 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 SUPERFAMILY SSF50249 316 399 1.16E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 SUPERFAMILY SSF52113 599 676 6.54E-21 T 14-10-2018 IPR036420 BRCT domain superfamily Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 PIRSF PIRSF001604 1 677 1.8E-256 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 Gene3D G3DSA:2.40.50.140 317 389 4.3E-31 T 14-10-2018 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 Pfam PF14520 Helix-hairpin-helix domain 447 506 3.1E-5 T 14-10-2018 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 6 317 5.0E-126 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 669 3.4E-256 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 321 396 1.7E-33 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 Gene3D G3DSA:3.30.470.90 73 316 2.4E-96 T 14-10-2018 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 Gene3D G3DSA:1.10.150.20 430 510 4.1E-24 T 14-10-2018 Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 SUPERFAMILY SSF47781 403 590 9.85E-58 T 14-10-2018 IPR010994 RuvA domain 2-like Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 600 671 6.8E-16 T 14-10-2018 IPR001357 BRCT domain Tlie_1254 743eef37140629cfdeba1ba83ba3c952 682 SUPERFAMILY SSF56091 4 315 2.7E-118 T 14-10-2018 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 SMART SM00889 480 598 1.8E-75 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 Pfam PF00679 Elongation factor G C-terminus 600 686 2.0E-32 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 SUPERFAMILY SSF50447 265 404 8.17E-36 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 Gene3D G3DSA:3.30.230.10 484 687 3.0E-97 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 Pfam PF00009 Elongation factor Tu GTP binding domain 11 282 1.5E-69 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 182 1.1E-32 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 SMART SM00838 600 687 1.8E-58 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 Gene3D G3DSA:2.40.30.10 294 405 2.3E-41 T 14-10-2018 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 Hamap MF_00054_B Elongation factor G [fusA]. 8 690 111.652 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 SUPERFAMILY SSF52540 9 282 2.31E-111 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 SUPERFAMILY SSF54211 479 599 1.72E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 SUPERFAMILY SSF54980 404 481 1.4E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 PRINTS PR00315 GTP-binding elongation factor signature 60 68 3.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 PRINTS PR00315 GTP-binding elongation factor signature 132 141 3.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 PRINTS PR00315 GTP-binding elongation factor signature 80 90 3.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 PRINTS PR00315 GTP-binding elongation factor signature 96 107 3.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 SUPERFAMILY SSF54980 603 689 8.15E-32 T 14-10-2018 IPR035647 EF-G domain III/V-like Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 Gene3D G3DSA:3.30.70.240 604 674 3.0E-97 T 14-10-2018 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 TIGRFAM TIGR00484 EF-G: translation elongation factor G 8 690 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 Pfam PF03764 Elongation factor G, domain IV 479 598 1.1E-50 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 Pfam PF14492 Elongation Factor G, domain II 404 478 1.3E-34 T 14-10-2018 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 Gene3D G3DSA:3.40.50.300 5 293 2.8E-112 T 14-10-2018 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 Pfam PF03144 Elongation factor Tu domain 2 324 391 8.5E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tlie_0643 66e477412edbcaac149d3c38e4faf1e7 690 Gene3D G3DSA:3.30.70.870 406 483 4.5E-34 T 14-10-2018 Tlie_1031 19e0d42632f2ebeed6cd3cd6e43887a5 345 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 331 1.0E-21 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Tlie_1031 19e0d42632f2ebeed6cd3cd6e43887a5 345 Gene3D G3DSA:3.40.50.300 21 183 7.9E-40 T 14-10-2018 Tlie_1031 19e0d42632f2ebeed6cd3cd6e43887a5 345 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 237 5.2E-108 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Tlie_1031 19e0d42632f2ebeed6cd3cd6e43887a5 345 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 328 3.3E-136 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Tlie_1031 19e0d42632f2ebeed6cd3cd6e43887a5 345 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 255 328 1.4E-31 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Tlie_1031 19e0d42632f2ebeed6cd3cd6e43887a5 345 SMART SM00382 53 184 9.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1031 19e0d42632f2ebeed6cd3cd6e43887a5 345 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 345 156.201 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Tlie_1031 19e0d42632f2ebeed6cd3cd6e43887a5 345 SUPERFAMILY SSF52540 21 252 2.72E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1031 19e0d42632f2ebeed6cd3cd6e43887a5 345 Gene3D G3DSA:1.10.8.60 184 258 1.3E-27 T 14-10-2018 Tlie_1031 19e0d42632f2ebeed6cd3cd6e43887a5 345 SUPERFAMILY SSF46785 258 331 2.52E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1031 19e0d42632f2ebeed6cd3cd6e43887a5 345 Gene3D G3DSA:1.10.10.10 259 337 1.8E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0015 7e4280dc01dbf2d390d7840ea12dccb9 340 Pfam PF02080 TrkA-C domain 260 327 2.7E-13 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Tlie_0015 7e4280dc01dbf2d390d7840ea12dccb9 340 Gene3D G3DSA:1.10.287.70 8 85 5.4E-13 T 14-10-2018 Tlie_0015 7e4280dc01dbf2d390d7840ea12dccb9 340 SUPERFAMILY SSF116726 239 326 7.59E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tlie_0015 7e4280dc01dbf2d390d7840ea12dccb9 340 Pfam PF02254 TrkA-N domain 110 224 1.1E-30 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Tlie_0015 7e4280dc01dbf2d390d7840ea12dccb9 340 SUPERFAMILY SSF81324 10 129 2.88E-16 T 14-10-2018 Tlie_0015 7e4280dc01dbf2d390d7840ea12dccb9 340 Pfam PF07885 Ion channel 14 85 1.1E-8 T 14-10-2018 IPR013099 Potassium channel domain Tlie_0015 7e4280dc01dbf2d390d7840ea12dccb9 340 Gene3D G3DSA:3.30.70.1450 258 331 4.3E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tlie_0015 7e4280dc01dbf2d390d7840ea12dccb9 340 SUPERFAMILY SSF51735 105 248 6.83E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0015 7e4280dc01dbf2d390d7840ea12dccb9 340 Gene3D G3DSA:3.40.50.720 104 254 3.6E-36 T 14-10-2018 Tlie_1195 ae0aef2db3a7c57a9d6737ee35bc5862 425 SMART SM00729 186 396 1.1E-19 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tlie_1195 ae0aef2db3a7c57a9d6737ee35bc5862 425 Pfam PF04055 Radical SAM superfamily 193 357 6.6E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_1195 ae0aef2db3a7c57a9d6737ee35bc5862 425 SUPERFAMILY SSF52242 99 168 3.14E-7 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tlie_1195 ae0aef2db3a7c57a9d6737ee35bc5862 425 Gene3D G3DSA:3.80.30.20 186 401 2.2E-20 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tlie_1195 ae0aef2db3a7c57a9d6737ee35bc5862 425 Pfam PF02310 B12 binding domain 34 163 2.2E-8 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tlie_1195 ae0aef2db3a7c57a9d6737ee35bc5862 425 SUPERFAMILY SSF102114 177 387 3.14E-30 T 14-10-2018 Tlie_1576 87207a76db0a5594a7a52ff74c77bbc6 233 SUPERFAMILY SSF48008 80 206 6.8E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_1576 87207a76db0a5594a7a52ff74c77bbc6 233 SUPERFAMILY SSF46785 10 78 1.61E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1576 87207a76db0a5594a7a52ff74c77bbc6 233 Gene3D G3DSA:1.20.120.530 77 213 2.2E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_1576 87207a76db0a5594a7a52ff74c77bbc6 233 SMART SM00895 84 209 1.0E-8 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_1576 87207a76db0a5594a7a52ff74c77bbc6 233 Pfam PF07729 FCD domain 86 205 6.8E-18 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_1576 87207a76db0a5594a7a52ff74c77bbc6 233 Gene3D G3DSA:1.10.10.10 8 75 2.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1576 87207a76db0a5594a7a52ff74c77bbc6 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 9.5E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1576 87207a76db0a5594a7a52ff74c77bbc6 233 SMART SM00345 16 74 5.2E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0019 dcf9b7e94e39563b54e2d2505ad1626c 390 SUPERFAMILY SSF53187 11 388 1.51E-67 T 14-10-2018 Tlie_0019 dcf9b7e94e39563b54e2d2505ad1626c 390 Gene3D G3DSA:3.40.630.10 21 377 2.9E-106 T 14-10-2018 Tlie_0019 dcf9b7e94e39563b54e2d2505ad1626c 390 Gene3D G3DSA:3.30.70.360 186 304 2.9E-106 T 14-10-2018 Tlie_0019 dcf9b7e94e39563b54e2d2505ad1626c 390 SUPERFAMILY SSF55031 186 285 1.05E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tlie_0019 dcf9b7e94e39563b54e2d2505ad1626c 390 Pfam PF07687 Peptidase dimerisation domain 182 288 5.6E-25 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Tlie_0019 dcf9b7e94e39563b54e2d2505ad1626c 390 Pfam PF01546 Peptidase family M20/M25/M40 79 385 1.3E-38 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tlie_0019 dcf9b7e94e39563b54e2d2505ad1626c 390 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 16 378 2.3E-86 T 14-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase Tlie_0876 dacbfaafc786d0ecec99c26842bee3e4 316 Pfam PF01715 IPP transferase 42 285 1.7E-71 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Tlie_0876 dacbfaafc786d0ecec99c26842bee3e4 316 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 308 27.866 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Tlie_0876 dacbfaafc786d0ecec99c26842bee3e4 316 Gene3D G3DSA:1.10.20.140 116 189 1.9E-93 T 14-10-2018 Tlie_0876 dacbfaafc786d0ecec99c26842bee3e4 316 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 296 2.7E-84 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Tlie_0876 dacbfaafc786d0ecec99c26842bee3e4 316 SUPERFAMILY SSF52540 10 155 2.64E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0876 dacbfaafc786d0ecec99c26842bee3e4 316 Gene3D G3DSA:3.40.50.300 13 292 1.9E-93 T 14-10-2018 Tlie_0333 0e3c6a68fa98278cc2559f73b0f91208 381 SUPERFAMILY SSF103473 16 380 8.89E-42 T 14-10-2018 IPR036259 MFS transporter superfamily Tlie_0333 0e3c6a68fa98278cc2559f73b0f91208 381 Gene3D G3DSA:1.20.1250.20 10 378 9.3E-34 T 14-10-2018 Tlie_0333 0e3c6a68fa98278cc2559f73b0f91208 381 ProSitePatterns PS00217 Sugar transport proteins signature 2. 297 322 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Tlie_0333 0e3c6a68fa98278cc2559f73b0f91208 381 Pfam PF03209 PUCC protein 272 348 1.3E-4 T 14-10-2018 IPR004896 PucC-related Tlie_0333 0e3c6a68fa98278cc2559f73b0f91208 381 Pfam PF07690 Major Facilitator Superfamily 16 224 1.9E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tlie_1722 da812e1e93554a3a1d25b40cbf4850b2 454 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 5 448 2.8E-135 T 14-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 Tlie_1722 da812e1e93554a3a1d25b40cbf4850b2 454 SUPERFAMILY SSF51556 52 377 2.58E-90 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tlie_1722 da812e1e93554a3a1d25b40cbf4850b2 454 Pfam PF01979 Amidohydrolase family 48 430 2.8E-25 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tlie_1722 da812e1e93554a3a1d25b40cbf4850b2 454 Gene3D G3DSA:2.30.40.10 7 447 1.3E-154 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tlie_1722 da812e1e93554a3a1d25b40cbf4850b2 454 Gene3D G3DSA:3.20.20.140 52 374 1.3E-154 T 14-10-2018 Tlie_1722 da812e1e93554a3a1d25b40cbf4850b2 454 SUPERFAMILY SSF51338 1 76 4.32E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tlie_1722 da812e1e93554a3a1d25b40cbf4850b2 454 SUPERFAMILY SSF51338 351 449 7.62E-34 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tlie_0032 c87c2a55bb4dd4a4bfce27006dca3487 230 Gene3D G3DSA:1.20.120.530 91 228 2.0E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0032 c87c2a55bb4dd4a4bfce27006dca3487 230 SMART SM00345 8 68 8.9E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0032 c87c2a55bb4dd4a4bfce27006dca3487 230 Gene3D G3DSA:1.10.10.10 2 70 1.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0032 c87c2a55bb4dd4a4bfce27006dca3487 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0032 c87c2a55bb4dd4a4bfce27006dca3487 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.3E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0032 c87c2a55bb4dd4a4bfce27006dca3487 230 Pfam PF07729 FCD domain 93 222 1.9E-23 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_0032 c87c2a55bb4dd4a4bfce27006dca3487 230 SUPERFAMILY SSF46785 7 72 7.23E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_0032 c87c2a55bb4dd4a4bfce27006dca3487 230 SUPERFAMILY SSF48008 91 227 7.32E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0032 c87c2a55bb4dd4a4bfce27006dca3487 230 SMART SM00895 93 223 5.2E-22 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_0032 c87c2a55bb4dd4a4bfce27006dca3487 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 3.5E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 Pfam PF00122 E1-E2 ATPase 112 304 3.0E-49 T 14-10-2018 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 Gene3D G3DSA:3.40.1110.10 334 540 7.2E-286 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 SUPERFAMILY SSF56784 322 736 4.92E-54 T 14-10-2018 IPR036412 HAD-like superfamily Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 SUPERFAMILY SSF81665 4 913 1.96E-106 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 Pfam PF00690 Cation transporter/ATPase, N-terminus 5 72 8.1E-24 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 SMART SM00831 4 77 6.8E-28 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 565 8.3E-36 T 14-10-2018 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 533 544 8.3E-36 T 14-10-2018 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 324 338 8.3E-36 T 14-10-2018 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 162 176 8.3E-36 T 14-10-2018 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 638 657 8.3E-36 T 14-10-2018 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 662 674 8.3E-36 T 14-10-2018 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 Gene3D G3DSA:2.70.150.10 20 227 7.2E-286 T 14-10-2018 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 Gene3D G3DSA:3.40.50.1000 321 683 7.2E-286 T 14-10-2018 IPR023214 HAD superfamily Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 Gene3D G3DSA:1.20.1110.10 55 907 7.2E-286 T 14-10-2018 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 871 891 4.6E-16 T 14-10-2018 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 458 476 4.6E-16 T 14-10-2018 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 244 266 4.6E-16 T 14-10-2018 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 78 98 4.6E-16 T 14-10-2018 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 317 338 4.6E-16 T 14-10-2018 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 SUPERFAMILY SSF81660 331 537 6.32E-54 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 209 345 5.2E-23 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 608 718 1.0E-27 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 Pfam PF13246 Cation transport ATPase (P-type) 389 472 1.1E-14 T 14-10-2018 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 Pfam PF00689 Cation transporting ATPase, C-terminus 727 909 1.8E-33 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 326 332 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 SUPERFAMILY SSF81653 116 223 6.8E-30 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Tlie_0259 34ef8ec433ed953400c4b2bbec9f8078 917 Pfam PF00702 haloacid dehalogenase-like hydrolase 477 651 2.2E-15 T 14-10-2018 Tlie_1776 eb65c4efa40179d92ae4bacf988fd2b2 143 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 135 7.1E-23 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Tlie_1776 eb65c4efa40179d92ae4bacf988fd2b2 143 SMART SM00226 5 138 2.6E-52 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Tlie_1776 eb65c4efa40179d92ae4bacf988fd2b2 143 Gene3D G3DSA:3.40.50.2300 2 139 3.6E-53 T 14-10-2018 Tlie_1776 eb65c4efa40179d92ae4bacf988fd2b2 143 SUPERFAMILY SSF52788 5 136 4.06E-46 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Tlie_0919 612db5778fcf748e878cd763790264f0 384 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 216 3.8E-40 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Tlie_0919 612db5778fcf748e878cd763790264f0 384 Pfam PF02542 YgbB family 225 379 9.5E-50 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tlie_0919 612db5778fcf748e878cd763790264f0 384 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 224 381 28.867 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tlie_0919 612db5778fcf748e878cd763790264f0 384 Gene3D G3DSA:3.30.1330.50 222 384 3.0E-56 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tlie_0919 612db5778fcf748e878cd763790264f0 384 SUPERFAMILY SSF69765 224 381 1.57E-48 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tlie_0919 612db5778fcf748e878cd763790264f0 384 SUPERFAMILY SSF53448 5 216 3.47E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_0919 612db5778fcf748e878cd763790264f0 384 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 258 273 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tlie_0919 612db5778fcf748e878cd763790264f0 384 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 225 380 6.0E-48 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tlie_0919 612db5778fcf748e878cd763790264f0 384 Gene3D G3DSA:3.90.550.10 1 219 1.6E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 SUPERFAMILY SSF50447 455 554 3.54E-20 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 Gene3D G3DSA:3.30.980.10 565 699 1.6E-47 T 14-10-2018 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 SUPERFAMILY SSF101353 244 461 4.32E-63 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 Gene3D G3DSA:3.30.930.10 3 240 3.2E-107 T 14-10-2018 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 SUPERFAMILY SSF55186 554 715 4.84E-47 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 PRINTS PR00980 Alanyl-tRNA synthetase signature 72 83 5.3E-33 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 5.3E-33 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 PRINTS PR00980 Alanyl-tRNA synthetase signature 197 208 5.3E-33 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 PRINTS PR00980 Alanyl-tRNA synthetase signature 224 237 5.3E-33 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 5.3E-33 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 Pfam PF01411 tRNA synthetases class II (A) 8 556 7.3E-214 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 Gene3D G3DSA:3.30.54.20 626 679 1.6E-47 T 14-10-2018 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 Pfam PF02272 DHHA1 domain 736 873 2.4E-19 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 Gene3D G3DSA:2.40.30.130 450 554 3.9E-10 T 14-10-2018 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 SMART SM00863 655 698 1.2E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 697 8.3E-17 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 171.642 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 Gene3D G3DSA:3.10.310.40 765 875 4.5E-28 T 14-10-2018 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 SUPERFAMILY SSF55681 6 240 3.98E-100 T 14-10-2018 Tlie_0872 01fe45ba72c39ec62941034f166ac577 879 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 856 2.3E-299 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tlie_0568 ad2d21907738c2b70023dc7ee91157c4 332 Gene3D G3DSA:3.40.50.2000 2 147 1.5E-20 T 14-10-2018 Tlie_0568 ad2d21907738c2b70023dc7ee91157c4 332 Gene3D G3DSA:3.40.50.2000 151 332 4.6E-41 T 14-10-2018 Tlie_0568 ad2d21907738c2b70023dc7ee91157c4 332 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 78 306 2.4E-28 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Tlie_0568 ad2d21907738c2b70023dc7ee91157c4 332 SUPERFAMILY SSF53756 9 330 4.39E-72 T 14-10-2018 Tlie_0502 26fcd4ac13f4f2e05a140421ec002490 646 Pfam PF16326 ABC transporter C-terminal domain 575 636 6.4E-8 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Tlie_0502 26fcd4ac13f4f2e05a140421ec002490 646 Gene3D G3DSA:3.40.50.300 4 281 1.5E-63 T 14-10-2018 Tlie_0502 26fcd4ac13f4f2e05a140421ec002490 646 Pfam PF00005 ABC transporter 336 467 1.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0502 26fcd4ac13f4f2e05a140421ec002490 646 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0502 26fcd4ac13f4f2e05a140421ec002490 646 Pfam PF00005 ABC transporter 18 186 1.3E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0502 26fcd4ac13f4f2e05a140421ec002490 646 SUPERFAMILY SSF52540 308 519 6.8E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0502 26fcd4ac13f4f2e05a140421ec002490 646 SMART SM00382 26 231 2.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0502 26fcd4ac13f4f2e05a140421ec002490 646 SMART SM00382 345 512 4.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0502 26fcd4ac13f4f2e05a140421ec002490 646 Pfam PF12848 ABC transporter 225 301 2.3E-20 T 14-10-2018 IPR032781 ABC-transporter extension domain Tlie_0502 26fcd4ac13f4f2e05a140421ec002490 646 SUPERFAMILY SSF52540 2 245 1.0E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0502 26fcd4ac13f4f2e05a140421ec002490 646 Gene3D G3DSA:3.40.50.300 284 548 6.2E-64 T 14-10-2018 Tlie_0502 26fcd4ac13f4f2e05a140421ec002490 646 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_1154 cfe9e2a53d4eb8fc385a80f7e97475a2 312 Gene3D G3DSA:3.80.30.20 41 299 2.3E-11 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tlie_1154 cfe9e2a53d4eb8fc385a80f7e97475a2 312 Pfam PF16199 Radical_SAM C-terminal domain 216 297 6.7E-23 T 14-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 Tlie_1154 cfe9e2a53d4eb8fc385a80f7e97475a2 312 SMART SM00729 22 254 3.1E-24 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tlie_1154 cfe9e2a53d4eb8fc385a80f7e97475a2 312 Pfam PF04055 Radical SAM superfamily 29 209 4.3E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_1154 cfe9e2a53d4eb8fc385a80f7e97475a2 312 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 5 308 8.4E-74 T 14-10-2018 IPR005911 Protein YhcC-like GO:0051536 Tlie_1154 cfe9e2a53d4eb8fc385a80f7e97475a2 312 SUPERFAMILY SSF102114 30 265 1.7E-35 T 14-10-2018 Tlie_0862 1739472b452b2670ca7819d81ef1feb6 595 PRINTS PR00811 Bacterial general secretion pathway protein D signature 421 445 3.1E-16 T 14-10-2018 IPR001775 GspD/PilQ family Tlie_0862 1739472b452b2670ca7819d81ef1feb6 595 PRINTS PR00811 Bacterial general secretion pathway protein D signature 549 567 3.1E-16 T 14-10-2018 IPR001775 GspD/PilQ family Tlie_0862 1739472b452b2670ca7819d81ef1feb6 595 PRINTS PR00811 Bacterial general secretion pathway protein D signature 337 347 3.1E-16 T 14-10-2018 IPR001775 GspD/PilQ family Tlie_0862 1739472b452b2670ca7819d81ef1feb6 595 SMART SM00965 216 265 0.0047 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Tlie_0862 1739472b452b2670ca7819d81ef1feb6 595 Gene3D G3DSA:3.55.50.30 164 279 2.5E-17 T 14-10-2018 Tlie_0862 1739472b452b2670ca7819d81ef1feb6 595 Pfam PF00263 Bacterial type II and III secretion system protein 425 584 2.3E-40 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 635 657 1.1E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 764 788 1.1E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 SMART SM00928 442 487 1.0E-22 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 SUPERFAMILY SSF52833 6 98 2.8E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 SUPERFAMILY SSF140490 438 539 7.85E-37 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 Gene3D G3DSA:3.50.50.60 754 875 1.7E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 455 466 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 7 83 2.7E-7 T 14-10-2018 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 Gene3D G3DSA:3.50.50.60 630 753 1.1E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 SUPERFAMILY SSF142019 112 353 2.75E-96 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 537 619 3.8E-21 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 Gene3D G3DSA:3.10.20.600 345 439 6.1E-30 T 14-10-2018 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 444 527 2.0E-31 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 925 947 9.1E-16 T 14-10-2018 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 768 786 9.1E-16 T 14-10-2018 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 636 655 9.1E-16 T 14-10-2018 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 Gene3D G3DSA:3.40.30.10 6 102 3.4E-28 T 14-10-2018 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 Gene3D G3DSA:3.40.50.11540 166 344 1.1E-81 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 SUPERFAMILY SSF51971 634 906 3.12E-56 T 14-10-2018 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 Gene3D G3DSA:3.50.50.60 881 973 6.8E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 161 332 2.5E-47 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 Pfam PF10531 SLBB domain 356 404 1.8E-7 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 Gene3D G3DSA:1.20.1440.230 440 540 8.4E-32 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 SUPERFAMILY SSF142984 355 437 3.53E-22 T 14-10-2018 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 635 960 4.5E-34 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tlie_1465 631ac19b9921cc54a64d444a27128af6 1046 SUPERFAMILY SSF46548 544 643 5.75E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tlie_1312 667a0f4689e42bf3c63776f3bce71697 377 Pfam PF01513 ATP-NAD kinase 7 374 1.3E-50 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Tlie_1312 667a0f4689e42bf3c63776f3bce71697 377 Gene3D G3DSA:3.40.50.10330 69 177 2.0E-5 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Tlie_1312 667a0f4689e42bf3c63776f3bce71697 377 PIRSF PIRSF016907 4 377 1.6E-129 T 14-10-2018 IPR011386 Putative ATP-NAD kinase Tlie_1312 667a0f4689e42bf3c63776f3bce71697 377 SUPERFAMILY SSF111331 6 174 6.1E-7 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 Gene3D G3DSA:1.10.460.10 147 565 1.1E-153 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 678 695 0.54 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 637 675 1.3E-15 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 592 631 1.9E-9 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 Gene3D G3DSA:3.40.50.140 10 146 6.1E-49 T 14-10-2018 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 SUPERFAMILY SSF57783 635 670 5.44E-5 T 14-10-2018 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 Gene3D G3DSA:2.70.20.10 196 471 1.1E-153 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 Gene3D G3DSA:1.10.290.10 270 405 1.1E-153 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 Pfam PF01751 Toprim domain 16 122 1.0E-26 T 14-10-2018 IPR006171 TOPRIM domain Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 299 322 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 SMART SM00436 116 204 1.0E-42 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 SUPERFAMILY SSF56712 15 605 1.44E-181 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 Pfam PF01131 DNA topoisomerase 140 562 1.2E-124 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 17 631 3.5E-228 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 Hamap MF_00952 DNA topoisomerase 1 [topA]. 15 662 52.232 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 SMART SM00437 262 525 4.1E-109 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 SMART SM00493 15 115 4.1E-31 T 14-10-2018 IPR006171 TOPRIM domain Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 313 322 1.1E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 1.1E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 487 501 1.1E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 89 102 1.1E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tlie_0531 03f6ff3db860ca9aadc37a04a8c9d444 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 174 192 1.1E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tlie_1014 fe0dfb880db5af2bc55b4d7067240971 241 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 173 233 8.3E-6 T 14-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tlie_1014 fe0dfb880db5af2bc55b4d7067240971 241 Gene3D G3DSA:3.40.50.10240 23 240 2.9E-47 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tlie_1014 fe0dfb880db5af2bc55b4d7067240971 241 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 26 234 6.0E-39 T 14-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tlie_1014 fe0dfb880db5af2bc55b4d7067240971 241 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 51 141 3.2E-16 T 14-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tlie_1014 fe0dfb880db5af2bc55b4d7067240971 241 SUPERFAMILY SSF63999 18 145 2.49E-25 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 Gene3D G3DSA:3.40.50.620 32 576 2.3E-269 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 Gene3D G3DSA:2.30.210.10 577 590 2.3E-269 T 14-10-2018 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 529 551 1.4E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 490 508 1.4E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 167 1.4E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 125 142 1.4E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 1.4E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 1.4E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 562 572 1.4E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 Gene3D G3DSA:1.10.730.10 601 761 3.2E-50 T 14-10-2018 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 SUPERFAMILY SSF50677 225 418 3.03E-47 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 3 576 4.5E-276 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 SUPERFAMILY SSF47323 622 825 1.42E-33 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 406 2.2E-70 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 Gene3D G3DSA:3.90.740.10 227 418 2.3E-269 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 421 620 1.0E-24 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 12 171 8.5E-26 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 824 23.577 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 Gene3D G3DSA:3.10.20.590 765 824 5.8E-18 T 14-10-2018 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 Pfam PF08264 Anticodon-binding domain of tRNA 664 786 3.4E-18 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Tlie_0702 2112455e6489e3049ebd59e651ef329d 826 SUPERFAMILY SSF52374 3 628 2.71E-158 T 14-10-2018 Tlie_1711 beab69defd3a8c3ec2b96f7afd69c944 360 Pfam PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain 184 330 1.3E-45 T 14-10-2018 IPR003421 Opine dehydrogenase GO:0016491|GO:0050662|GO:0055114 Tlie_1711 beab69defd3a8c3ec2b96f7afd69c944 360 SUPERFAMILY SSF48179 186 359 6.8E-42 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tlie_1711 beab69defd3a8c3ec2b96f7afd69c944 360 SUPERFAMILY SSF51735 1 105 2.94E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1711 beab69defd3a8c3ec2b96f7afd69c944 360 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 104 4.1E-8 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tlie_1711 beab69defd3a8c3ec2b96f7afd69c944 360 Gene3D G3DSA:1.10.1040.10 194 349 3.0E-53 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Tlie_1711 beab69defd3a8c3ec2b96f7afd69c944 360 Gene3D G3DSA:3.40.50.720 1 193 9.8E-70 T 14-10-2018 Tlie_1463 244638ba8fcf4353b436f9e8777a4e75 373 Pfam PF08448 PAS fold 48 132 1.1E-5 T 14-10-2018 IPR013656 PAS fold-4 Tlie_1463 244638ba8fcf4353b436f9e8777a4e75 373 Gene3D G3DSA:3.30.565.10 227 366 5.7E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_1463 244638ba8fcf4353b436f9e8777a4e75 373 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 342 1.7E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1463 244638ba8fcf4353b436f9e8777a4e75 373 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 361 1.7E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1463 244638ba8fcf4353b436f9e8777a4e75 373 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 317 1.7E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1463 244638ba8fcf4353b436f9e8777a4e75 373 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 272 363 1.3E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_1463 244638ba8fcf4353b436f9e8777a4e75 373 SUPERFAMILY SSF55785 50 143 2.54E-10 T 14-10-2018 IPR035965 PAS domain superfamily Tlie_1463 244638ba8fcf4353b436f9e8777a4e75 373 Gene3D G3DSA:3.30.450.20 7 146 1.6E-14 T 14-10-2018 Tlie_1463 244638ba8fcf4353b436f9e8777a4e75 373 SUPERFAMILY SSF55874 238 362 2.62E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_1463 244638ba8fcf4353b436f9e8777a4e75 373 SMART SM00387 267 364 1.8E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_0070 ee75d208ec83443b7a386c74da870d91 974 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 3 184 2.6E-50 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 Tlie_0070 ee75d208ec83443b7a386c74da870d91 974 SUPERFAMILY SSF64518 3 456 4.84E-39 T 14-10-2018 Tlie_0070 ee75d208ec83443b7a386c74da870d91 974 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 2.5E-17 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Tlie_0070 ee75d208ec83443b7a386c74da870d91 974 Gene3D G3DSA:1.20.58.1830 941 963 2.4E-6 T 14-10-2018 Tlie_0070 ee75d208ec83443b7a386c74da870d91 974 Gene3D G3DSA:2.170.280.10 851 878 2.4E-6 T 14-10-2018 Tlie_0070 ee75d208ec83443b7a386c74da870d91 974 Pfam PF00700 Bacterial flagellin C-terminal helical region 892 973 3.5E-11 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Tlie_0070 ee75d208ec83443b7a386c74da870d91 974 Gene3D G3DSA:1.20.1330.10 41 235 2.0E-38 T 14-10-2018 Tlie_0070 ee75d208ec83443b7a386c74da870d91 974 Gene3D G3DSA:1.20.1330.10 879 935 2.4E-6 T 14-10-2018 Tlie_0070 ee75d208ec83443b7a386c74da870d91 974 SUPERFAMILY SSF64518 709 973 1.29E-21 T 14-10-2018 Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 Gene3D G3DSA:3.40.50.11540 155 333 4.9E-84 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 Gene3D G3DSA:3.10.20.600 334 428 1.7E-31 T 14-10-2018 Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 570 581 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 Gene3D G3DSA:3.30.70.20 535 585 1.2E-12 T 14-10-2018 Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 SUPERFAMILY SSF54862 529 587 5.42E-16 T 14-10-2018 Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 Pfam PF10531 SLBB domain 345 394 7.6E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 Pfam PF14697 4Fe-4S dicluster domain 534 586 6.1E-10 T 14-10-2018 Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 SUPERFAMILY SSF142984 343 426 2.48E-24 T 14-10-2018 Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 Gene3D G3DSA:3.40.30.10 5 96 4.3E-16 T 14-10-2018 Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 Gene3D G3DSA:1.20.1440.230 429 530 2.3E-35 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 151 321 1.5E-49 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 432 516 5.3E-34 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 540 551 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 SUPERFAMILY SSF140490 427 528 1.29E-38 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 SMART SM00928 431 476 1.2E-22 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 SUPERFAMILY SSF142019 106 342 1.57E-95 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1248 7747fa34f23466a646e0f8a72fb2d52a 588 SUPERFAMILY SSF52833 2 94 5.26E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tlie_0521 9f4baad27d11660ad2c3732b744e4b01 619 Gene3D G3DSA:3.40.50.970 1 185 1.1E-50 T 14-10-2018 Tlie_0521 9f4baad27d11660ad2c3732b744e4b01 619 SUPERFAMILY SSF54862 534 611 1.42E-14 T 14-10-2018 Tlie_0521 9f4baad27d11660ad2c3732b744e4b01 619 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 540 7.6E-23 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tlie_0521 9f4baad27d11660ad2c3732b744e4b01 619 SUPERFAMILY SSF52922 238 300 1.05E-6 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_0521 9f4baad27d11660ad2c3732b744e4b01 619 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 16 213 5.6E-12 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Tlie_0521 9f4baad27d11660ad2c3732b744e4b01 619 SUPERFAMILY SSF52518 2 214 4.91E-53 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_0521 9f4baad27d11660ad2c3732b744e4b01 619 Gene3D G3DSA:3.40.50.970 377 550 7.0E-17 T 14-10-2018 Tlie_0521 9f4baad27d11660ad2c3732b744e4b01 619 Gene3D G3DSA:3.30.70.20 558 613 1.5E-11 T 14-10-2018 Tlie_0521 9f4baad27d11660ad2c3732b744e4b01 619 SUPERFAMILY SSF52518 362 555 9.29E-27 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_0521 9f4baad27d11660ad2c3732b744e4b01 619 PIRSF PIRSF006439 1 618 3.3E-216 T 14-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 Tlie_0521 9f4baad27d11660ad2c3732b744e4b01 619 Pfam PF00037 4Fe-4S binding domain 590 611 2.9E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_0521 9f4baad27d11660ad2c3732b744e4b01 619 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 596 607 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_0521 9f4baad27d11660ad2c3732b744e4b01 619 TIGRFAM TIGR03336 IOR_alpha: indolepyruvate ferredoxin oxidoreductase, alpha subunit 4 611 1.4E-210 T 14-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 Tlie_1851 cd9e8261f1fdacf0c0fd54c66f593185 259 TIGRFAM TIGR00292 TIGR00292: thiazole biosynthesis enzyme 6 259 4.8E-94 T 14-10-2018 IPR002922 Thiazole biosynthetic enzyme Thi4 family Tlie_1851 cd9e8261f1fdacf0c0fd54c66f593185 259 SUPERFAMILY SSF51905 3 254 4.21E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1851 cd9e8261f1fdacf0c0fd54c66f593185 259 Pfam PF01946 Thi4 family 9 240 2.9E-77 T 14-10-2018 Tlie_1851 cd9e8261f1fdacf0c0fd54c66f593185 259 Gene3D G3DSA:3.50.50.60 1 259 3.9E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1851 cd9e8261f1fdacf0c0fd54c66f593185 259 Hamap MF_00304 Thiamine thiazole synthase [thi4]. 3 259 41.534 T 14-10-2018 IPR022828 Thiazole biosynthetic enzyme, prokaryotic Tlie_1851 cd9e8261f1fdacf0c0fd54c66f593185 259 PRINTS PR00419 Adrenodoxin reductase family signature 27 49 1.3E-6 T 14-10-2018 Tlie_1851 cd9e8261f1fdacf0c0fd54c66f593185 259 PRINTS PR00419 Adrenodoxin reductase family signature 50 63 1.3E-6 T 14-10-2018 Tlie_0222 ddb3f9b6a8124b484a6be9bbd246c3c0 305 Gene3D G3DSA:3.20.20.60 1 295 9.2E-106 T 14-10-2018 Tlie_0222 ddb3f9b6a8124b484a6be9bbd246c3c0 305 ProSitePatterns PS00161 Isocitrate lyase signature. 117 122 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 Tlie_0222 ddb3f9b6a8124b484a6be9bbd246c3c0 305 SUPERFAMILY SSF51621 2 290 1.48E-92 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tlie_0222 ddb3f9b6a8124b484a6be9bbd246c3c0 305 Pfam PF13714 Phosphoenolpyruvate phosphomutase 7 253 2.8E-49 T 14-10-2018 Tlie_0117 e862b57cb9cb71bb68a62a99b7df8984 204 Gene3D G3DSA:3.40.1550.10 1 203 3.3E-51 T 14-10-2018 IPR028976 CheC-like superfamily Tlie_0117 e862b57cb9cb71bb68a62a99b7df8984 204 Pfam PF04509 CheC-like family 106 140 1.1E-5 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 Tlie_0117 e862b57cb9cb71bb68a62a99b7df8984 204 Pfam PF04509 CheC-like family 5 38 2.0E-9 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 Tlie_0117 e862b57cb9cb71bb68a62a99b7df8984 204 SUPERFAMILY SSF103039 1 203 8.11E-42 T 14-10-2018 IPR028976 CheC-like superfamily Tlie_0099 f6decd7da4bd23353d2331c9232c43b9 166 SUPERFAMILY SSF103039 46 160 2.09E-17 T 14-10-2018 IPR028976 CheC-like superfamily Tlie_0099 f6decd7da4bd23353d2331c9232c43b9 166 Gene3D G3DSA:3.40.1550.10 6 163 1.5E-24 T 14-10-2018 IPR028976 CheC-like superfamily Tlie_0099 f6decd7da4bd23353d2331c9232c43b9 166 Pfam PF13690 Chemotaxis phosphatase CheX 48 141 1.5E-13 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain Tlie_1865 5dc357e778f8fe73f3fa8ed407d8d3cb 65 SMART SM00345 8 64 9.1E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1865 5dc357e778f8fe73f3fa8ed407d8d3cb 65 SUPERFAMILY SSF46785 6 64 1.56E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1865 5dc357e778f8fe73f3fa8ed407d8d3cb 65 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 1.4E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1865 5dc357e778f8fe73f3fa8ed407d8d3cb 65 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 1.4E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1865 5dc357e778f8fe73f3fa8ed407d8d3cb 65 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 64 1.7E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1865 5dc357e778f8fe73f3fa8ed407d8d3cb 65 Gene3D G3DSA:1.10.10.10 3 65 6.8E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0848 6839b5967bad7eb45656baa73fe099a5 293 Gene3D G3DSA:1.10.260.40 2 106 1.3E-20 T 14-10-2018 Tlie_0848 6839b5967bad7eb45656baa73fe099a5 293 Pfam PF13464 Domain of unknown function (DUF4115) 213 281 4.6E-16 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 Tlie_0848 6839b5967bad7eb45656baa73fe099a5 293 Pfam PF13413 Helix-turn-helix domain 16 69 1.6E-16 T 14-10-2018 Tlie_0328 4200ccb868e47fac0039eb0baace6a98 109 SMART SM00418 15 96 1.7E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tlie_0328 4200ccb868e47fac0039eb0baace6a98 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 3.4E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tlie_0328 4200ccb868e47fac0039eb0baace6a98 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 3.4E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tlie_0328 4200ccb868e47fac0039eb0baace6a98 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 3.4E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tlie_0328 4200ccb868e47fac0039eb0baace6a98 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 3.4E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tlie_0328 4200ccb868e47fac0039eb0baace6a98 109 Gene3D G3DSA:1.10.10.10 3 104 5.3E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0328 4200ccb868e47fac0039eb0baace6a98 109 SUPERFAMILY SSF46785 3 93 2.37E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_0328 4200ccb868e47fac0039eb0baace6a98 109 Pfam PF12840 Helix-turn-helix domain 15 73 4.5E-14 T 14-10-2018 Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 147 270 5.8E-20 T 14-10-2018 IPR000014 PAS domain Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 271 397 1.9E-18 T 14-10-2018 IPR000014 PAS domain Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 142 1.4E-23 T 14-10-2018 IPR000014 PAS domain Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 SUPERFAMILY SSF55781 386 556 5.61E-6 T 14-10-2018 Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 SUPERFAMILY SSF55785 26 137 5.96E-23 T 14-10-2018 IPR035965 PAS domain superfamily Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 Gene3D G3DSA:3.30.450.20 21 148 4.2E-26 T 14-10-2018 Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 Gene3D G3DSA:3.30.450.20 149 273 2.8E-26 T 14-10-2018 Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 SUPERFAMILY SSF55785 260 388 3.7E-23 T 14-10-2018 IPR035965 PAS domain superfamily Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 SUPERFAMILY SSF55785 134 261 9.83E-26 T 14-10-2018 IPR035965 PAS domain superfamily Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 SMART SM00086 348 390 13.0 T 14-10-2018 IPR001610 PAC motif Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 SMART SM00086 222 263 24.0 T 14-10-2018 IPR001610 PAC motif Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 SMART SM00086 96 137 130.0 T 14-10-2018 IPR001610 PAC motif Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 Gene3D G3DSA:3.30.450.20 274 401 4.8E-21 T 14-10-2018 Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 Pfam PF08448 PAS fold 287 391 4.0E-12 T 14-10-2018 IPR013656 PAS fold-4 Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 Pfam PF08448 PAS fold 155 263 1.2E-14 T 14-10-2018 IPR013656 PAS fold-4 Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 Pfam PF00989 PAS fold 23 123 1.3E-13 T 14-10-2018 IPR013767 PAS fold GO:0006355 Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 Gene3D G3DSA:3.30.450.40 402 563 9.1E-6 T 14-10-2018 IPR029016 GAF-like domain superfamily Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 SMART SM00091 22 88 1.9E-10 T 14-10-2018 IPR000014 PAS domain Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 SMART SM00091 149 216 1.6E-8 T 14-10-2018 IPR000014 PAS domain Tlie_0061 7ae92394b74d7e9440751ddddc8c552c 571 SMART SM00091 275 341 3.9E-8 T 14-10-2018 IPR000014 PAS domain Tlie_1389 40f59f9978dcc1e711cb365a88beb9cf 504 Pfam PF03553 Na+/H+ antiporter family 162 482 9.5E-47 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Tlie_1389 40f59f9978dcc1e711cb365a88beb9cf 504 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 10 487 7.3E-132 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 Tlie_0069 2363ca9ac8b89e74e4a0fea516e1f9be 642 SUPERFAMILY SSF117143 357 602 3.01E-40 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Tlie_0069 2363ca9ac8b89e74e4a0fea516e1f9be 642 Gene3D G3DSA:2.60.98.20 371 523 1.5E-9 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily Tlie_0069 2363ca9ac8b89e74e4a0fea516e1f9be 642 SUPERFAMILY SSF117143 92 271 8.11E-24 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Tlie_0069 2363ca9ac8b89e74e4a0fea516e1f9be 642 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 562 639 2.9E-20 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tlie_0069 2363ca9ac8b89e74e4a0fea516e1f9be 642 Pfam PF00460 Flagella basal body rod protein 8 35 8.0E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tlie_0069 2363ca9ac8b89e74e4a0fea516e1f9be 642 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 392 623 1.4E-46 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Tlie_0069 2363ca9ac8b89e74e4a0fea516e1f9be 642 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 274 3.0E-36 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Tlie_0069 2363ca9ac8b89e74e4a0fea516e1f9be 642 Pfam PF07559 Flagellar basal body protein FlaE 399 522 2.6E-15 T 14-10-2018 IPR011491 Flagellar hook protein FlgE Tlie_0069 2363ca9ac8b89e74e4a0fea516e1f9be 642 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Tlie_0806 bc726e14c14da1ba14f3dc8c35c4301f 354 Gene3D G3DSA:2.40.30.170 62 280 2.0E-51 T 14-10-2018 Tlie_0806 bc726e14c14da1ba14f3dc8c35c4301f 354 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 349 7.8E-49 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tlie_0806 bc726e14c14da1ba14f3dc8c35c4301f 354 Gene3D G3DSA:2.40.420.20 281 349 2.0E-51 T 14-10-2018 Tlie_0806 bc726e14c14da1ba14f3dc8c35c4301f 354 SUPERFAMILY SSF111369 63 267 4.45E-21 T 14-10-2018 Tlie_0806 bc726e14c14da1ba14f3dc8c35c4301f 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 267 7.2E-11 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tlie_0806 bc726e14c14da1ba14f3dc8c35c4301f 354 Gene3D G3DSA:2.40.50.100 73 201 2.0E-51 T 14-10-2018 Tlie_0806 bc726e14c14da1ba14f3dc8c35c4301f 354 Gene3D G3DSA:1.10.287.470 108 167 2.0E-51 T 14-10-2018 Tlie_1476 56282a08003f918709776156bd86c7c8 398 SUPERFAMILY SSF53383 24 397 6.12E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1476 56282a08003f918709776156bd86c7c8 398 Gene3D G3DSA:3.40.640.10 64 285 5.8E-107 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1476 56282a08003f918709776156bd86c7c8 398 Pfam PF00155 Aminotransferase class I and II 43 390 9.3E-53 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tlie_1476 56282a08003f918709776156bd86c7c8 398 Gene3D G3DSA:3.90.1150.10 27 393 5.8E-107 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1324 d6e64c17becdc28b22b90ab4b15765d3 163 SUPERFAMILY SSF50249 3 118 2.91E-44 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_1324 d6e64c17becdc28b22b90ab4b15765d3 163 Pfam PF00436 Single-strand binding protein family 5 108 8.6E-34 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Tlie_1324 d6e64c17becdc28b22b90ab4b15765d3 163 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 31.877 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Tlie_1324 d6e64c17becdc28b22b90ab4b15765d3 163 Gene3D G3DSA:2.40.50.140 1 125 3.4E-41 T 14-10-2018 Tlie_1324 d6e64c17becdc28b22b90ab4b15765d3 163 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 116 1.9E-37 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 SUPERFAMILY SSF50447 557 653 5.89E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 Gene3D G3DSA:3.40.50.300 152 326 5.5E-75 T 14-10-2018 Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 314 1.2E-35 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 2.6E-19 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 Gene3D G3DSA:1.10.10.2480 1 68 8.9E-21 T 14-10-2018 Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 Pfam PF11987 Translation-initiation factor 2 441 545 7.7E-40 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 SUPERFAMILY SSF50447 330 410 3.53E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 Pfam PF00009 Elongation factor Tu GTP binding domain 159 316 2.8E-35 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 Gene3D G3DSA:2.40.30.10 557 654 1.2E-35 T 14-10-2018 Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 Gene3D G3DSA:2.40.30.10 327 445 1.3E-40 T 14-10-2018 Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 SUPERFAMILY SSF52156 436 562 9.15E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 Gene3D G3DSA:3.40.50.10050 449 556 4.1E-41 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 ProSitePatterns PS01176 Initiation factor 2 signature. 606 628 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 SUPERFAMILY SSF52540 151 327 2.06E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 75 655 4.0E-243 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Tlie_0924 4c680db847b2fa7abe12cb5c607f9794 656 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 653 16.807 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Tlie_1580 324d786f135d446eed4ede2ff5d16cd3 518 Pfam PF03313 Serine dehydratase alpha chain 259 502 2.9E-53 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Tlie_1580 324d786f135d446eed4ede2ff5d16cd3 518 Pfam PF03315 Serine dehydratase beta chain 16 78 7.6E-6 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Tlie_1580 324d786f135d446eed4ede2ff5d16cd3 518 SUPERFAMILY SSF143548 20 140 3.01E-15 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Tlie_1580 324d786f135d446eed4ede2ff5d16cd3 518 Gene3D G3DSA:3.30.1330.90 14 141 4.4E-9 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 PRINTS PR00097 Anthranilate synthase component II signature 83 94 9.3E-6 T 14-10-2018 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 PRINTS PR00097 Anthranilate synthase component II signature 56 65 9.3E-6 T 14-10-2018 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 PRINTS PR00097 Anthranilate synthase component II signature 172 185 9.3E-6 T 14-10-2018 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 Gene3D G3DSA:3.40.50.620 204 398 1.0E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_0602 084825e6e142cb25d58b6b481680a923 518 PRINTS PR00096 Glutamine amidotransferase superfamily signature 56 65 4.3E-7 T 14-10-2018 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 PRINTS PR00096 Glutamine amidotransferase superfamily signature 83 94 4.3E-7 T 14-10-2018 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 4.3E-7 T 14-10-2018 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 518 1.8E-146 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 12 200 5.9E-71 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 Gene3D G3DSA:3.40.50.880 5 200 9.6E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_0602 084825e6e142cb25d58b6b481680a923 518 Pfam PF00117 Glutamine amidotransferase class-I 14 195 3.8E-43 T 14-10-2018 IPR017926 Glutamine amidotransferase Tlie_0602 084825e6e142cb25d58b6b481680a923 518 SUPERFAMILY SSF52402 188 439 1.15E-56 T 14-10-2018 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 9 518 53.084 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 83 99 7.8E-7 T 14-10-2018 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 12 26 7.8E-7 T 14-10-2018 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 53 67 7.8E-7 T 14-10-2018 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 Pfam PF00958 GMP synthase C terminal domain 426 517 1.2E-43 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 SUPERFAMILY SSF52317 10 232 7.34E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_0602 084825e6e142cb25d58b6b481680a923 518 Pfam PF02540 NAD synthase 210 289 1.7E-9 T 14-10-2018 IPR022310 NAD/GMP synthase Tlie_0602 084825e6e142cb25d58b6b481680a923 518 SUPERFAMILY SSF54810 398 518 5.1E-51 T 14-10-2018 Tlie_0602 084825e6e142cb25d58b6b481680a923 518 Gene3D G3DSA:3.30.300.10 399 518 4.2E-53 T 14-10-2018 Tlie_1863 c7397572b0017814613317b9fb58b3dc 420 Gene3D G3DSA:3.90.226.30 6 411 7.7E-145 T 14-10-2018 Tlie_1863 c7397572b0017814613317b9fb58b3dc 420 Pfam PF09861 Domain of unknown function (DUF2088) 7 204 1.6E-64 T 14-10-2018 IPR018657 LarA-like, N-terminal GO:0050043 KEGG: 00620+5.1.2.1 Tlie_1863 c7397572b0017814613317b9fb58b3dc 420 SUPERFAMILY SSF53335 226 334 1.4E-5 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_1863 c7397572b0017814613317b9fb58b3dc 420 Gene3D G3DSA:3.40.50.11440 29 267 7.7E-145 T 14-10-2018 Tlie_0528 1a7044939665ad0da14af07b43faf1f2 503 SUPERFAMILY SSF54211 5 164 5.69E-28 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_0528 1a7044939665ad0da14af07b43faf1f2 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 283 297 4.0E-6 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Tlie_0528 1a7044939665ad0da14af07b43faf1f2 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 335 347 4.0E-6 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Tlie_0528 1a7044939665ad0da14af07b43faf1f2 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 205 220 4.0E-6 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Tlie_0528 1a7044939665ad0da14af07b43faf1f2 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 311 324 4.0E-6 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Tlie_0528 1a7044939665ad0da14af07b43faf1f2 503 SUPERFAMILY SSF52540 186 495 2.35E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0528 1a7044939665ad0da14af07b43faf1f2 503 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 399 494 2.9E-28 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Tlie_0528 1a7044939665ad0da14af07b43faf1f2 503 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 9 494 1.1E-156 T 14-10-2018 IPR004482 Mg chelatase-related protein Tlie_0528 1a7044939665ad0da14af07b43faf1f2 503 Pfam PF13541 Subunit ChlI of Mg-chelatase 19 137 5.0E-35 T 14-10-2018 Tlie_0528 1a7044939665ad0da14af07b43faf1f2 503 Gene3D G3DSA:3.30.230.10 11 163 7.0E-8 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tlie_0528 1a7044939665ad0da14af07b43faf1f2 503 Gene3D G3DSA:3.40.50.300 186 499 7.8E-56 T 14-10-2018 Tlie_0528 1a7044939665ad0da14af07b43faf1f2 503 SMART SM00382 206 386 3.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0528 1a7044939665ad0da14af07b43faf1f2 503 Pfam PF01078 Magnesium chelatase, subunit ChlI 186 389 2.2E-87 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 SMART SM00534 602 791 4.6E-109 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 Gene3D G3DSA:1.10.1420.10 265 551 8.4E-89 T 14-10-2018 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 Gene3D G3DSA:1.10.1420.10 380 495 8.4E-89 T 14-10-2018 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 SUPERFAMILY SSF55271 5 114 1.83E-38 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 9 852 5.9E-263 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 PIRSF PIRSF037677 398 817 1.6E-107 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 PIRSF PIRSF037677 235 366 2.2E-26 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 PIRSF PIRSF037677 2 143 4.6E-20 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 Gene3D G3DSA:3.40.1170.10 2 120 1.3E-44 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 SMART SM00533 278 583 1.2E-91 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 Gene3D G3DSA:3.40.50.300 560 834 2.7E-98 T 14-10-2018 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 Pfam PF05190 MutS family domain IV 420 507 2.5E-28 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 683 699 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 Pfam PF05188 MutS domain II 127 251 3.7E-12 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 9 847 22.855 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 Pfam PF05192 MutS domain III 268 551 4.6E-40 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 Pfam PF00488 MutS domain V 606 793 2.3E-79 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 SUPERFAMILY SSF53150 125 277 2.49E-21 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 Gene3D G3DSA:3.30.420.110 126 258 2.7E-19 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 Pfam PF01624 MutS domain I 10 116 9.6E-39 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 SUPERFAMILY SSF48334 266 558 2.09E-80 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Tlie_0874 14523b389193f4d8babea25ab0f4fea6 862 SUPERFAMILY SSF52540 559 795 2.9E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0719 932bbcc4ba83516d5eef08c705702179 157 Pfam PF00872 Transposase, Mutator family 17 127 1.5E-35 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_0820 6d45ac64a70ddece208ca8c61f060790 318 Gene3D G3DSA:3.10.290.10 1 67 2.6E-8 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tlie_0820 6d45ac64a70ddece208ca8c61f060790 318 Pfam PF00849 RNA pseudouridylate synthase 93 240 5.8E-30 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0820 6d45ac64a70ddece208ca8c61f060790 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 10 306 2.6E-63 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0820 6d45ac64a70ddece208ca8c61f060790 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0820 6d45ac64a70ddece208ca8c61f060790 318 SUPERFAMILY SSF55120 80 313 6.88E-59 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0820 6d45ac64a70ddece208ca8c61f060790 318 Gene3D G3DSA:3.30.2350.10 85 310 1.3E-58 T 14-10-2018 Tlie_0122 bb8b56f41f145ef325859702569813b4 336 Gene3D G3DSA:1.10.601.10 53 168 1.0E-28 T 14-10-2018 Tlie_0122 bb8b56f41f145ef325859702569813b4 336 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 123 136 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0122 bb8b56f41f145ef325859702569813b4 336 SUPERFAMILY SSF88659 247 323 1.96E-8 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tlie_0122 bb8b56f41f145ef325859702569813b4 336 Pfam PF04542 Sigma-70 region 2 98 168 8.8E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tlie_0122 bb8b56f41f145ef325859702569813b4 336 SUPERFAMILY SSF88946 55 167 4.4E-31 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tlie_0122 bb8b56f41f145ef325859702569813b4 336 PRINTS PR00046 Major sigma-70 factor signature 309 320 3.7E-9 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0122 bb8b56f41f145ef325859702569813b4 336 PRINTS PR00046 Major sigma-70 factor signature 272 284 3.7E-9 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0122 bb8b56f41f145ef325859702569813b4 336 PRINTS PR00046 Major sigma-70 factor signature 123 136 3.7E-9 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0122 bb8b56f41f145ef325859702569813b4 336 PRINTS PR00046 Major sigma-70 factor signature 294 309 3.7E-9 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0122 bb8b56f41f145ef325859702569813b4 336 PRINTS PR00046 Major sigma-70 factor signature 147 155 3.7E-9 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0122 bb8b56f41f145ef325859702569813b4 336 Pfam PF00140 Sigma-70 factor, region 1.2 62 85 2.1E-8 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tlie_0122 bb8b56f41f145ef325859702569813b4 336 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 88 322 4.1E-20 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tlie_0122 bb8b56f41f145ef325859702569813b4 336 Gene3D G3DSA:1.10.10.10 249 328 4.6E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1220 f061f46867968c06fab5eaab7cde7295 352 Gene3D G3DSA:3.30.470.20 112 342 1.1E-53 T 14-10-2018 Tlie_1220 f061f46867968c06fab5eaab7cde7295 352 Pfam PF07478 D-ala D-ala ligase C-terminus 135 338 2.7E-29 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_1220 f061f46867968c06fab5eaab7cde7295 352 SUPERFAMILY SSF56059 123 335 3.35E-36 T 14-10-2018 Tlie_1220 f061f46867968c06fab5eaab7cde7295 352 SUPERFAMILY SSF52440 40 123 2.65E-9 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tlie_1220 f061f46867968c06fab5eaab7cde7295 352 Gene3D G3DSA:3.30.1490.20 138 209 1.1E-53 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tlie_0755 0000b791a130355d547af835c3166f3a 602 Gene3D G3DSA:3.40.1380.20 342 473 2.3E-39 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tlie_0755 0000b791a130355d547af835c3166f3a 602 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tlie_0755 0000b791a130355d547af835c3166f3a 602 SUPERFAMILY SSF51621 2 341 9.07E-101 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tlie_0755 0000b791a130355d547af835c3166f3a 602 Gene3D G3DSA:3.20.20.60 6 332 1.1E-141 T 14-10-2018 Tlie_0755 0000b791a130355d547af835c3166f3a 602 Pfam PF02887 Pyruvate kinase, alpha/beta domain 358 471 1.6E-32 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tlie_0755 0000b791a130355d547af835c3166f3a 602 Gene3D G3DSA:3.50.30.10 475 585 7.2E-34 T 14-10-2018 Tlie_0755 0000b791a130355d547af835c3166f3a 602 Pfam PF00224 Pyruvate kinase, barrel domain 3 337 2.6E-132 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tlie_0755 0000b791a130355d547af835c3166f3a 602 PRINTS PR01050 Pyruvate kinase family signature 244 268 7.8E-73 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tlie_0755 0000b791a130355d547af835c3166f3a 602 PRINTS PR01050 Pyruvate kinase family signature 294 312 7.8E-73 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tlie_0755 0000b791a130355d547af835c3166f3a 602 PRINTS PR01050 Pyruvate kinase family signature 60 76 7.8E-73 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tlie_0755 0000b791a130355d547af835c3166f3a 602 PRINTS PR01050 Pyruvate kinase family signature 217 243 7.8E-73 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tlie_0755 0000b791a130355d547af835c3166f3a 602 PRINTS PR01050 Pyruvate kinase family signature 269 293 7.8E-73 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tlie_0755 0000b791a130355d547af835c3166f3a 602 PRINTS PR01050 Pyruvate kinase family signature 187 201 7.8E-73 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tlie_0755 0000b791a130355d547af835c3166f3a 602 PRINTS PR01050 Pyruvate kinase family signature 313 329 7.8E-73 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tlie_0755 0000b791a130355d547af835c3166f3a 602 Gene3D G3DSA:2.40.33.10 72 168 1.1E-141 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tlie_0755 0000b791a130355d547af835c3166f3a 602 SUPERFAMILY SSF52009 469 583 1.16E-28 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Tlie_0755 0000b791a130355d547af835c3166f3a 602 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 473 5.5E-173 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tlie_0755 0000b791a130355d547af835c3166f3a 602 SUPERFAMILY SSF52935 323 474 3.92E-40 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tlie_0755 0000b791a130355d547af835c3166f3a 602 SUPERFAMILY SSF50800 71 167 5.41E-25 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Tlie_0755 0000b791a130355d547af835c3166f3a 602 Pfam PF00391 PEP-utilising enzyme, mobile domain 506 576 3.5E-21 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Tlie_1153 25e84d4a35d2d04ce8c745f5e1b6294e 172 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 157 29.825 T 14-10-2018 IPR033747 Class I PurE Tlie_1153 25e84d4a35d2d04ce8c745f5e1b6294e 172 PIRSF PIRSF001338 1 164 6.9E-63 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Tlie_1153 25e84d4a35d2d04ce8c745f5e1b6294e 172 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 158 3.0E-56 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Tlie_1153 25e84d4a35d2d04ce8c745f5e1b6294e 172 Gene3D G3DSA:3.40.50.7700 1 161 2.9E-64 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Tlie_1153 25e84d4a35d2d04ce8c745f5e1b6294e 172 Pfam PF00731 AIR carboxylase 6 151 6.6E-59 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Tlie_1153 25e84d4a35d2d04ce8c745f5e1b6294e 172 SUPERFAMILY SSF52255 4 162 8.11E-57 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Tlie_1153 25e84d4a35d2d04ce8c745f5e1b6294e 172 SMART SM01001 4 153 3.3E-78 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Tlie_1097 3339ca5060bdba2193ae0ac007c8ecbf 180 SUPERFAMILY SSF53271 7 171 2.23E-43 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tlie_1097 3339ca5060bdba2193ae0ac007c8ecbf 180 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 4 177 35.99 T 14-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Tlie_1097 3339ca5060bdba2193ae0ac007c8ecbf 180 Gene3D G3DSA:3.40.50.2020 1 180 6.9E-60 T 14-10-2018 Tlie_1097 3339ca5060bdba2193ae0ac007c8ecbf 180 Pfam PF00156 Phosphoribosyl transferase domain 10 162 1.1E-20 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 SUPERFAMILY SSF142019 110 351 1.29E-99 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 453 464 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 159 331 3.0E-50 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 441 525 5.2E-34 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 Gene3D G3DSA:3.30.70.20 541 597 1.6E-15 T 14-10-2018 Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 Gene3D G3DSA:1.20.1440.230 438 540 1.6E-36 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 579 590 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 Gene3D G3DSA:3.40.30.10 4 100 5.0E-32 T 14-10-2018 Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 SMART SM00928 440 485 1.8E-25 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 Gene3D G3DSA:3.40.50.11540 164 342 7.0E-85 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 Pfam PF00037 4Fe-4S binding domain 544 565 2.4E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 Pfam PF00037 4Fe-4S binding domain 572 594 1.0E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 SUPERFAMILY SSF140490 436 538 2.75E-40 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 Gene3D G3DSA:3.10.20.600 343 437 8.4E-34 T 14-10-2018 Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 SUPERFAMILY SSF52833 4 94 1.45E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 SUPERFAMILY SSF54862 545 595 4.89E-15 T 14-10-2018 Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 5 81 6.8E-10 T 14-10-2018 Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 Pfam PF10531 SLBB domain 354 403 3.2E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1618 d9677b1f28da74535f0d1cce47f2dec3 597 SUPERFAMILY SSF142984 352 435 1.83E-25 T 14-10-2018 Tlie_1488 6c7d55d762ef5142d35fe8dd470af397 197 Gene3D G3DSA:2.50.20.10 23 194 6.0E-9 T 14-10-2018 Tlie_1488 6c7d55d762ef5142d35fe8dd470af397 197 SUPERFAMILY SSF89392 26 193 9.42E-10 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Tlie_1488 6c7d55d762ef5142d35fe8dd470af397 197 Pfam PF14371 Domain of unknown function (DUF4412) 34 150 4.9E-12 T 14-10-2018 IPR025524 Domain of unknown function DUF4412 Tlie_0856 002781e8c5f22a4ec0edb4ad504ed997 403 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 164 192 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 Tlie_0856 002781e8c5f22a4ec0edb4ad504ed997 403 Gene3D G3DSA:1.20.81.30 60 171 4.2E-27 T 14-10-2018 Tlie_0856 002781e8c5f22a4ec0edb4ad504ed997 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 1.2E-16 T 14-10-2018 IPR003004 GspF/PilC family Tlie_0856 002781e8c5f22a4ec0edb4ad504ed997 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 367 381 1.2E-16 T 14-10-2018 IPR003004 GspF/PilC family Tlie_0856 002781e8c5f22a4ec0edb4ad504ed997 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 402 1.2E-16 T 14-10-2018 IPR003004 GspF/PilC family Tlie_0856 002781e8c5f22a4ec0edb4ad504ed997 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 164 192 1.2E-16 T 14-10-2018 IPR003004 GspF/PilC family Tlie_0856 002781e8c5f22a4ec0edb4ad504ed997 403 Gene3D G3DSA:1.20.81.30 255 367 3.3E-25 T 14-10-2018 Tlie_0856 002781e8c5f22a4ec0edb4ad504ed997 403 Pfam PF00482 Type II secretion system (T2SS), protein F 71 192 2.3E-29 T 14-10-2018 IPR018076 Type II secretion system F domain Tlie_0856 002781e8c5f22a4ec0edb4ad504ed997 403 Pfam PF00482 Type II secretion system (T2SS), protein F 274 394 2.2E-25 T 14-10-2018 IPR018076 Type II secretion system F domain Tlie_1691 b3e7c90c54cd8ec2e1cfe4e5991f25cf 397 Pfam PF07687 Peptidase dimerisation domain 193 276 1.5E-5 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Tlie_1691 b3e7c90c54cd8ec2e1cfe4e5991f25cf 397 Gene3D G3DSA:3.40.630.10 19 368 1.1E-38 T 14-10-2018 Tlie_1691 b3e7c90c54cd8ec2e1cfe4e5991f25cf 397 Pfam PF01546 Peptidase family M20/M25/M40 88 390 1.0E-8 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tlie_1691 b3e7c90c54cd8ec2e1cfe4e5991f25cf 397 SUPERFAMILY SSF55031 194 288 1.42E-6 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tlie_1691 b3e7c90c54cd8ec2e1cfe4e5991f25cf 397 Gene3D G3DSA:3.30.70.360 175 291 1.1E-38 T 14-10-2018 Tlie_1691 b3e7c90c54cd8ec2e1cfe4e5991f25cf 397 SUPERFAMILY SSF53187 8 392 7.94E-22 T 14-10-2018 Tlie_0013 2160d26c43b08a75d9661b00a7b2e163 222 Gene3D G3DSA:1.20.120.530 100 220 2.1E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0013 2160d26c43b08a75d9661b00a7b2e163 222 SMART SM00895 106 219 5.3E-14 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_0013 2160d26c43b08a75d9661b00a7b2e163 222 SUPERFAMILY SSF48008 104 216 7.06E-16 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0013 2160d26c43b08a75d9661b00a7b2e163 222 Pfam PF08461 Ribonuclease R winged-helix domain 14 76 2.1E-11 T 14-10-2018 IPR013668 Ribonuclease R winged-helix domain Tlie_0013 2160d26c43b08a75d9661b00a7b2e163 222 Pfam PF07729 FCD domain 106 217 1.5E-16 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_0013 2160d26c43b08a75d9661b00a7b2e163 222 SUPERFAMILY SSF46785 10 67 1.36E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1265 d2373b5102fa2481fb043e5de63df822 1273 Pfam PF13289 SIR2-like domain 123 272 1.5E-18 T 14-10-2018 IPR039444 SIR2-like domain Tlie_1265 d2373b5102fa2481fb043e5de63df822 1273 SUPERFAMILY SSF52467 21 177 6.07E-9 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Tlie_0406 9aa39e80e4c47faee8f4e43f8d558e4b 135 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 91 108 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tlie_0406 9aa39e80e4c47faee8f4e43f8d558e4b 135 Gene3D G3DSA:2.40.50.100 58 134 4.7E-28 T 14-10-2018 Tlie_0406 9aa39e80e4c47faee8f4e43f8d558e4b 135 SUPERFAMILY SSF51230 55 134 2.49E-25 T 14-10-2018 IPR011053 Single hybrid motif Tlie_0406 9aa39e80e4c47faee8f4e43f8d558e4b 135 Pfam PF00364 Biotin-requiring enzyme 68 134 3.6E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Tlie_1281 97976d362c87101c3b1ad75f2995f7eb 649 ProSitePatterns PS00801 Transketolase signature 1. 33 53 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tlie_1281 97976d362c87101c3b1ad75f2995f7eb 649 SUPERFAMILY SSF52518 18 285 2.46E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1281 97976d362c87101c3b1ad75f2995f7eb 649 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 27 288 1.1E-42 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tlie_1281 97976d362c87101c3b1ad75f2995f7eb 649 SUPERFAMILY SSF52518 326 503 8.96E-35 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1281 97976d362c87101c3b1ad75f2995f7eb 649 Pfam PF02780 Transketolase, C-terminal domain 521 639 1.5E-17 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Tlie_1281 97976d362c87101c3b1ad75f2995f7eb 649 Gene3D G3DSA:3.40.50.970 312 510 3.7E-46 T 14-10-2018 Tlie_1281 97976d362c87101c3b1ad75f2995f7eb 649 SUPERFAMILY SSF52922 515 648 1.31E-21 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_1281 97976d362c87101c3b1ad75f2995f7eb 649 Gene3D G3DSA:3.40.50.920 521 649 2.1E-25 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_1281 97976d362c87101c3b1ad75f2995f7eb 649 Pfam PF02779 Transketolase, pyrimidine binding domain 356 501 1.9E-17 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tlie_1281 97976d362c87101c3b1ad75f2995f7eb 649 SMART SM00861 332 502 4.0E-27 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tlie_1281 97976d362c87101c3b1ad75f2995f7eb 649 Gene3D G3DSA:3.40.50.970 16 311 2.9E-80 T 14-10-2018 Tlie_0145 9baf3cc6c8841f0988a421773e0c5eb5 429 Hamap MF_01970 Kynureninase [kynU]. 1 413 38.936 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Tlie_0145 9baf3cc6c8841f0988a421773e0c5eb5 429 TIGRFAM TIGR01814 kynureninase: kynureninase 11 414 3.4E-114 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Tlie_0145 9baf3cc6c8841f0988a421773e0c5eb5 429 PIRSF PIRSF038800 3 421 5.9E-148 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Tlie_0145 9baf3cc6c8841f0988a421773e0c5eb5 429 Gene3D G3DSA:3.40.640.10 45 314 3.2E-140 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0145 9baf3cc6c8841f0988a421773e0c5eb5 429 SUPERFAMILY SSF53383 8 414 3.41E-78 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0145 9baf3cc6c8841f0988a421773e0c5eb5 429 Pfam PF00266 Aminotransferase class-V 79 334 1.9E-17 T 14-10-2018 IPR000192 Aminotransferase class V domain Tlie_0145 9baf3cc6c8841f0988a421773e0c5eb5 429 Gene3D G3DSA:3.90.1150.10 14 413 3.2E-140 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_0984 6ba80bb105be142f0b28b58517b9713a 495 Pfam PF04055 Radical SAM superfamily 234 394 5.8E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_0984 6ba80bb105be142f0b28b58517b9713a 495 Gene3D G3DSA:3.80.30.20 230 445 2.8E-25 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tlie_0984 6ba80bb105be142f0b28b58517b9713a 495 SUPERFAMILY SSF102114 218 441 9.29E-34 T 14-10-2018 Tlie_0984 6ba80bb105be142f0b28b58517b9713a 495 SMART SM00729 230 439 4.9E-27 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tlie_0984 6ba80bb105be142f0b28b58517b9713a 495 Pfam PF02310 B12 binding domain 45 158 3.1E-7 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tlie_0202 9ef5d1384d67163f1c3e4541fe6ac150 105 SUPERFAMILY SSF143414 4 92 8.89E-32 T 14-10-2018 IPR037233 CcmK-like superfamily Tlie_0202 9ef5d1384d67163f1c3e4541fe6ac150 105 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 48 1.0E-12 T 14-10-2018 Tlie_0202 9ef5d1384d67163f1c3e4541fe6ac150 105 SMART SM00877 4 80 4.4E-36 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0202 9ef5d1384d67163f1c3e4541fe6ac150 105 Pfam PF00936 BMC domain 5 80 6.1E-28 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0202 9ef5d1384d67163f1c3e4541fe6ac150 105 Gene3D G3DSA:3.30.70.1710 1 104 1.5E-40 T 14-10-2018 Tlie_0886 705686c28c11880520db5d8c685bb04e 180 PRINTS PR00502 NUDIX hydrolase family signature 88 103 9.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Tlie_0886 705686c28c11880520db5d8c685bb04e 180 PRINTS PR00502 NUDIX hydrolase family signature 74 88 9.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Tlie_0886 705686c28c11880520db5d8c685bb04e 180 Pfam PF00293 NUDIX domain 44 161 1.1E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Tlie_0886 705686c28c11880520db5d8c685bb04e 180 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Tlie_0886 705686c28c11880520db5d8c685bb04e 180 SUPERFAMILY SSF55811 10 176 2.17E-49 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Tlie_0886 705686c28c11880520db5d8c685bb04e 180 Gene3D G3DSA:3.90.79.10 6 179 3.2E-54 T 14-10-2018 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 SUPERFAMILY SSF46955 426 479 1.92E-10 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 Gene3D G3DSA:3.50.40.10 202 404 7.0E-65 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 Pfam PF03483 B3/4 domain 219 388 9.4E-53 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 SMART SM00873 218 391 2.1E-64 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 Gene3D G3DSA:3.30.56.10 4 184 1.5E-49 T 14-10-2018 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 Gene3D G3DSA:3.30.930.10 491 698 2.9E-53 T 14-10-2018 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 SUPERFAMILY SSF55681 471 696 1.31E-45 T 14-10-2018 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 795 36.269 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 Pfam PF03147 Ferredoxin-fold anticodon binding domain 709 796 4.8E-26 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 SUPERFAMILY SSF50249 41 192 2.16E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 SUPERFAMILY SSF56037 216 394 1.44E-54 T 14-10-2018 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 Gene3D G3DSA:3.30.70.380 710 800 1.2E-26 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 799 2.4E-201 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 Pfam PF01588 Putative tRNA binding domain 46 147 9.7E-12 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 Gene3D G3DSA:3.30.56.10 407 478 5.3E-15 T 14-10-2018 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 SUPERFAMILY SSF54991 706 796 3.92E-25 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 Pfam PF03484 tRNA synthetase B5 domain 429 475 2.3E-11 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 Gene3D G3DSA:2.40.50.140 40 156 1.5E-49 T 14-10-2018 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 SMART SM00874 407 475 9.4E-14 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Tlie_0734 8809c3b477b7a9c4d3ae587f8038aefe 800 SMART SM00896 709 800 4.9E-31 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Tlie_1615 6a99ffea01b46626c3f6e74f1c0d1cc1 475 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 441 450 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Tlie_1615 6a99ffea01b46626c3f6e74f1c0d1cc1 475 Gene3D G3DSA:1.10.645.10 3 450 2.1E-105 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1615 6a99ffea01b46626c3f6e74f1c0d1cc1 475 SUPERFAMILY SSF56762 4 450 4.58E-124 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1615 6a99ffea01b46626c3f6e74f1c0d1cc1 475 Pfam PF00374 Nickel-dependent hydrogenase 268 450 1.1E-10 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Tlie_1615 6a99ffea01b46626c3f6e74f1c0d1cc1 475 Pfam PF00374 Nickel-dependent hydrogenase 42 119 1.7E-19 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Tlie_1615 6a99ffea01b46626c3f6e74f1c0d1cc1 475 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 42 67 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Tlie_1838 ac7aefe2123f9348e8c43876e05a3ed6 364 PIRSF PIRSF001500 2 362 3.4E-97 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Tlie_1838 ac7aefe2123f9348e8c43876e05a3ed6 364 Gene3D G3DSA:3.40.190.10 173 257 1.8E-51 T 14-10-2018 Tlie_1838 ac7aefe2123f9348e8c43876e05a3ed6 364 Gene3D G3DSA:3.30.70.260 273 362 6.8E-22 T 14-10-2018 Tlie_1838 ac7aefe2123f9348e8c43876e05a3ed6 364 SUPERFAMILY SSF53850 90 271 1.41E-49 T 14-10-2018 Tlie_1838 ac7aefe2123f9348e8c43876e05a3ed6 364 Gene3D G3DSA:3.40.190.10 94 266 1.8E-51 T 14-10-2018 Tlie_1838 ac7aefe2123f9348e8c43876e05a3ed6 364 SUPERFAMILY SSF48600 7 89 1.4E-15 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Tlie_1838 ac7aefe2123f9348e8c43876e05a3ed6 364 Gene3D G3DSA:1.20.59.10 2 92 4.3E-16 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Tlie_1838 ac7aefe2123f9348e8c43876e05a3ed6 364 Pfam PF01817 Chorismate mutase type II 13 87 1.9E-17 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Tlie_1838 ac7aefe2123f9348e8c43876e05a3ed6 364 Pfam PF00800 Prephenate dehydratase 91 268 1.4E-55 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Tlie_1838 ac7aefe2123f9348e8c43876e05a3ed6 364 SMART SM00830 13 89 8.4E-19 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Tlie_1838 ac7aefe2123f9348e8c43876e05a3ed6 364 SUPERFAMILY SSF55021 279 359 2.09E-19 T 14-10-2018 Tlie_1147 b2ff56ebe789b4b0f5f68c9a0a6aaea7 717 Pfam PF00586 AIR synthase related protein, N-terminal domain 443 546 1.5E-15 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Tlie_1147 b2ff56ebe789b4b0f5f68c9a0a6aaea7 717 Pfam PF00586 AIR synthase related protein, N-terminal domain 77 179 1.1E-21 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Tlie_1147 b2ff56ebe789b4b0f5f68c9a0a6aaea7 717 Pfam PF02769 AIR synthase related protein, C-terminal domain 191 344 2.8E-30 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Tlie_1147 b2ff56ebe789b4b0f5f68c9a0a6aaea7 717 SUPERFAMILY SSF56042 189 415 4.04E-50 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tlie_1147 b2ff56ebe789b4b0f5f68c9a0a6aaea7 717 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 717 239.568 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tlie_1147 b2ff56ebe789b4b0f5f68c9a0a6aaea7 717 SUPERFAMILY SSF56042 558 716 1.38E-18 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tlie_1147 b2ff56ebe789b4b0f5f68c9a0a6aaea7 717 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 8 673 1.6E-247 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tlie_1147 b2ff56ebe789b4b0f5f68c9a0a6aaea7 717 SUPERFAMILY SSF55326 26 186 5.98E-47 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tlie_1147 b2ff56ebe789b4b0f5f68c9a0a6aaea7 717 Gene3D G3DSA:3.30.1330.10 376 549 7.7E-49 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tlie_1147 b2ff56ebe789b4b0f5f68c9a0a6aaea7 717 Gene3D G3DSA:3.90.650.10 558 717 6.0E-14 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tlie_1147 b2ff56ebe789b4b0f5f68c9a0a6aaea7 717 PIRSF PIRSF001587 1 715 1.7E-259 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tlie_1147 b2ff56ebe789b4b0f5f68c9a0a6aaea7 717 SUPERFAMILY SSF55326 384 552 9.55E-40 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tlie_1147 b2ff56ebe789b4b0f5f68c9a0a6aaea7 717 Gene3D G3DSA:3.30.1330.10 35 182 2.4E-124 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tlie_1147 b2ff56ebe789b4b0f5f68c9a0a6aaea7 717 Gene3D G3DSA:3.90.650.10 19 346 2.4E-124 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tlie_1536 354b4877f875a5d7bac6c2631403582c 110 SUPERFAMILY SSF53146 1 110 1.44E-31 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Tlie_1536 354b4877f875a5d7bac6c2631403582c 110 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 9 96 1.3E-23 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Tlie_1536 354b4877f875a5d7bac6c2631403582c 110 Gene3D G3DSA:3.30.420.130 1 104 3.3E-30 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Tlie_0306 6b2889eed9eee7db57f3bffe4f38ec58 285 Gene3D G3DSA:3.40.50.150 10 280 7.7E-73 T 14-10-2018 Tlie_0306 6b2889eed9eee7db57f3bffe4f38ec58 285 Pfam PF01555 DNA methylase 29 249 2.2E-60 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Tlie_0306 6b2889eed9eee7db57f3bffe4f38ec58 285 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 236 256 4.6E-37 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tlie_0306 6b2889eed9eee7db57f3bffe4f38ec58 285 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 28 42 4.6E-37 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tlie_0306 6b2889eed9eee7db57f3bffe4f38ec58 285 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 76 96 4.6E-37 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tlie_0306 6b2889eed9eee7db57f3bffe4f38ec58 285 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 194 211 4.6E-37 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tlie_0306 6b2889eed9eee7db57f3bffe4f38ec58 285 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 213 231 4.6E-37 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tlie_0306 6b2889eed9eee7db57f3bffe4f38ec58 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 32 38 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tlie_0306 6b2889eed9eee7db57f3bffe4f38ec58 285 SUPERFAMILY SSF53335 5 258 2.99E-69 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_0818 e26b0260d506930bcefef1468e3c6904 404 PIRSF PIRSF006392 15 400 3.8E-113 T 14-10-2018 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0818 e26b0260d506930bcefef1468e3c6904 404 Pfam PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 52 221 9.4E-44 T 14-10-2018 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0818 e26b0260d506930bcefef1468e3c6904 404 Gene3D G3DSA:3.30.70.2130 93 234 8.4E-86 T 14-10-2018 Tlie_0818 e26b0260d506930bcefef1468e3c6904 404 Gene3D G3DSA:3.40.720.10 21 389 8.4E-86 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Tlie_0818 e26b0260d506930bcefef1468e3c6904 404 SUPERFAMILY SSF53649 18 368 2.19E-24 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Tlie_0818 e26b0260d506930bcefef1468e3c6904 404 Pfam PF01676 Metalloenzyme superfamily 19 391 1.1E-27 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Tlie_0818 e26b0260d506930bcefef1468e3c6904 404 TIGRFAM TIGR00306 apgM: phosphoglycerate mutase (2,3-diphosphoglycerate-independent), archaeal form 21 393 6.0E-80 T 14-10-2018 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0896 0dd70eb06365418f77cc61c9411de845 163 Pfam PF00156 Phosphoribosyl transferase domain 16 151 1.8E-17 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tlie_0896 0dd70eb06365418f77cc61c9411de845 163 Gene3D G3DSA:3.40.50.2020 9 160 1.7E-41 T 14-10-2018 Tlie_0896 0dd70eb06365418f77cc61c9411de845 163 SUPERFAMILY SSF53271 6 156 5.79E-34 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tlie_1282 86b10da3cd94b76ac8b312d3d8a78c3d 371 SUPERFAMILY SSF51735 137 303 4.21E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1282 86b10da3cd94b76ac8b312d3d8a78c3d 371 Gene3D G3DSA:3.40.50.720 3 353 3.0E-139 T 14-10-2018 Tlie_1282 86b10da3cd94b76ac8b312d3d8a78c3d 371 Gene3D G3DSA:3.40.50.720 130 305 3.0E-139 T 14-10-2018 Tlie_1282 86b10da3cd94b76ac8b312d3d8a78c3d 371 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 2.0E-154 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 Tlie_1282 86b10da3cd94b76ac8b312d3d8a78c3d 371 SUPERFAMILY SSF52283 1 360 2.04E-64 T 14-10-2018 Tlie_1282 86b10da3cd94b76ac8b312d3d8a78c3d 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.6E-45 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Tlie_1282 86b10da3cd94b76ac8b312d3d8a78c3d 371 PIRSF PIRSF000183 1 371 3.1E-158 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 Tlie_1282 86b10da3cd94b76ac8b312d3d8a78c3d 371 SMART SM01002 149 297 3.0E-81 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Tlie_1282 86b10da3cd94b76ac8b312d3d8a78c3d 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 4.8E-80 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Tlie_1282 86b10da3cd94b76ac8b312d3d8a78c3d 371 SMART SM01003 4 137 9.0E-77 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Tlie_0106 35e08c27715a00a9810b894cd6543ba9 660 Pfam PF00672 HAMP domain 305 352 1.8E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tlie_0106 35e08c27715a00a9810b894cd6543ba9 660 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 455 611 4.4E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tlie_0106 35e08c27715a00a9810b894cd6543ba9 660 Gene3D G3DSA:3.30.450.20 144 284 7.0E-31 T 14-10-2018 Tlie_0106 35e08c27715a00a9810b894cd6543ba9 660 Pfam PF02743 Cache domain 34 266 1.9E-30 T 14-10-2018 IPR033479 Double Cache domain 1 Tlie_0106 35e08c27715a00a9810b894cd6543ba9 660 SMART SM00283 377 659 2.3E-61 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tlie_0106 35e08c27715a00a9810b894cd6543ba9 660 Gene3D G3DSA:1.10.287.950 387 659 1.1E-64 T 14-10-2018 Tlie_0106 35e08c27715a00a9810b894cd6543ba9 660 SUPERFAMILY SSF58104 323 659 1.48E-64 T 14-10-2018 Tlie_0106 35e08c27715a00a9810b894cd6543ba9 660 SMART SM00304 303 355 1.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tlie_0106 35e08c27715a00a9810b894cd6543ba9 660 SMART SM00304 565 621 18.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tlie_0883 fe40759679037a1ba052566f38bc8a97 349 SUPERFAMILY SSF52922 239 348 5.89E-26 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_0883 fe40759679037a1ba052566f38bc8a97 349 Gene3D G3DSA:3.40.50.970 1 188 4.5E-62 T 14-10-2018 Tlie_0883 fe40759679037a1ba052566f38bc8a97 349 Gene3D G3DSA:3.40.50.920 236 349 8.2E-26 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_0883 fe40759679037a1ba052566f38bc8a97 349 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 247 341 1.6E-26 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Tlie_0883 fe40759679037a1ba052566f38bc8a97 349 SUPERFAMILY SSF52518 1 235 4.37E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_0883 fe40759679037a1ba052566f38bc8a97 349 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 14 230 1.5E-51 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Tlie_1594 f2107c5e96710fd93c67fa229651fc1d 302 SMART SM00091 8 78 7.3E-7 T 14-10-2018 IPR000014 PAS domain Tlie_1594 f2107c5e96710fd93c67fa229651fc1d 302 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 129 5.7E-15 T 14-10-2018 IPR000014 PAS domain Tlie_1594 f2107c5e96710fd93c67fa229651fc1d 302 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 298 1.8E-45 T 14-10-2018 IPR000160 GGDEF domain Tlie_1594 f2107c5e96710fd93c67fa229651fc1d 302 SMART SM00267 131 302 3.6E-61 T 14-10-2018 IPR000160 GGDEF domain Tlie_1594 f2107c5e96710fd93c67fa229651fc1d 302 SUPERFAMILY SSF55785 7 120 6.46E-23 T 14-10-2018 IPR035965 PAS domain superfamily Tlie_1594 f2107c5e96710fd93c67fa229651fc1d 302 Gene3D G3DSA:3.30.450.20 5 139 1.9E-24 T 14-10-2018 Tlie_1594 f2107c5e96710fd93c67fa229651fc1d 302 Pfam PF08448 PAS fold 15 127 6.9E-14 T 14-10-2018 IPR013656 PAS fold-4 Tlie_1594 f2107c5e96710fd93c67fa229651fc1d 302 Gene3D G3DSA:3.30.70.270 140 301 2.1E-55 T 14-10-2018 Tlie_1594 f2107c5e96710fd93c67fa229651fc1d 302 SUPERFAMILY SSF55073 147 300 2.67E-46 T 14-10-2018 IPR029787 Nucleotide cyclase Tlie_1594 f2107c5e96710fd93c67fa229651fc1d 302 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 138 301 2.4E-47 T 14-10-2018 IPR000160 GGDEF domain Tlie_1612 e318795e5d653e88aa172385fa0b230a 128 SMART SM00271 62 127 1.9E-17 T 14-10-2018 IPR001623 DnaJ domain Tlie_1612 e318795e5d653e88aa172385fa0b230a 128 PRINTS PR00625 DnaJ domain signature 107 127 1.4E-11 T 14-10-2018 IPR001623 DnaJ domain Tlie_1612 e318795e5d653e88aa172385fa0b230a 128 PRINTS PR00625 DnaJ domain signature 65 83 1.4E-11 T 14-10-2018 IPR001623 DnaJ domain Tlie_1612 e318795e5d653e88aa172385fa0b230a 128 PRINTS PR00625 DnaJ domain signature 83 98 1.4E-11 T 14-10-2018 IPR001623 DnaJ domain Tlie_1612 e318795e5d653e88aa172385fa0b230a 128 Pfam PF00226 DnaJ domain 63 124 1.1E-13 T 14-10-2018 IPR001623 DnaJ domain Tlie_1612 e318795e5d653e88aa172385fa0b230a 128 SUPERFAMILY SSF46565 50 126 1.83E-21 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Tlie_1612 e318795e5d653e88aa172385fa0b230a 128 Gene3D G3DSA:1.10.287.110 53 127 8.7E-16 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Tlie_1846 f27cb3755d25f2fe8c8fad4e8d8c5884 723 SMART SM00304 337 392 1.1E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tlie_1846 f27cb3755d25f2fe8c8fad4e8d8c5884 723 SMART SM00283 414 696 7.7E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tlie_1846 f27cb3755d25f2fe8c8fad4e8d8c5884 723 SUPERFAMILY SSF58104 366 696 1.06E-61 T 14-10-2018 Tlie_1846 f27cb3755d25f2fe8c8fad4e8d8c5884 723 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 500 647 7.7E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tlie_1846 f27cb3755d25f2fe8c8fad4e8d8c5884 723 Pfam PF00672 HAMP domain 337 386 1.9E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tlie_1846 f27cb3755d25f2fe8c8fad4e8d8c5884 723 Pfam PF16591 Helical bimodular sensor domain 179 301 7.5E-8 T 14-10-2018 IPR032255 Helical bimodular sensor domain Tlie_1846 f27cb3755d25f2fe8c8fad4e8d8c5884 723 Gene3D G3DSA:1.10.287.950 388 696 5.7E-62 T 14-10-2018 Tlie_1101 e2a49b49ccecf256a0e11d9fc7ea9ee0 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 4.9E-5 T 14-10-2018 Tlie_1101 e2a49b49ccecf256a0e11d9fc7ea9ee0 248 SUPERFAMILY SSF51735 4 247 4.76E-93 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1101 e2a49b49ccecf256a0e11d9fc7ea9ee0 248 Gene3D G3DSA:3.40.50.720 5 247 3.0E-89 T 14-10-2018 Tlie_1101 e2a49b49ccecf256a0e11d9fc7ea9ee0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.6E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1101 e2a49b49ccecf256a0e11d9fc7ea9ee0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.6E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1101 e2a49b49ccecf256a0e11d9fc7ea9ee0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.6E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1101 e2a49b49ccecf256a0e11d9fc7ea9ee0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.6E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1101 e2a49b49ccecf256a0e11d9fc7ea9ee0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.6E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1101 e2a49b49ccecf256a0e11d9fc7ea9ee0 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.6E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1101 e2a49b49ccecf256a0e11d9fc7ea9ee0 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 8.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1101 e2a49b49ccecf256a0e11d9fc7ea9ee0 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 8.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1101 e2a49b49ccecf256a0e11d9fc7ea9ee0 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 8.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1101 e2a49b49ccecf256a0e11d9fc7ea9ee0 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 245 1.1E-107 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Tlie_1101 e2a49b49ccecf256a0e11d9fc7ea9ee0 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 4.3E-72 T 14-10-2018 Tlie_0067 1e0f735cb0a261dad1465cb79bae9bfa 630 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 7 564 1.7E-261 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 Tlie_0067 1e0f735cb0a261dad1465cb79bae9bfa 630 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 6 565 52.583 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 Tlie_0067 1e0f735cb0a261dad1465cb79bae9bfa 630 Pfam PF08497 Radical SAM N-terminal 7 302 3.8E-132 T 14-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal Tlie_0067 1e0f735cb0a261dad1465cb79bae9bfa 630 SMART SM00729 299 550 9.2E-10 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tlie_0067 1e0f735cb0a261dad1465cb79bae9bfa 630 SUPERFAMILY SSF102114 303 545 1.28E-13 T 14-10-2018 Tlie_0067 1e0f735cb0a261dad1465cb79bae9bfa 630 Gene3D G3DSA:3.80.30.20 298 560 2.2E-14 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tlie_0067 1e0f735cb0a261dad1465cb79bae9bfa 630 Pfam PF04055 Radical SAM superfamily 304 510 2.1E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_0067 1e0f735cb0a261dad1465cb79bae9bfa 630 Pfam PF11842 Domain of unknown function (DUF3362) 518 626 5.6E-34 T 14-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal Tlie_0955 b5b1569091702f0af2e9d02a3b9b8c8e 68 Pfam PF12838 4Fe-4S dicluster domain 14 56 5.5E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_0955 b5b1569091702f0af2e9d02a3b9b8c8e 68 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 45 56 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_0955 b5b1569091702f0af2e9d02a3b9b8c8e 68 SUPERFAMILY SSF54862 6 63 1.28E-15 T 14-10-2018 Tlie_0955 b5b1569091702f0af2e9d02a3b9b8c8e 68 Gene3D G3DSA:3.30.70.20 39 68 5.2E-5 T 14-10-2018 Tlie_0955 b5b1569091702f0af2e9d02a3b9b8c8e 68 Gene3D G3DSA:3.30.70.20 2 38 1.4E-6 T 14-10-2018 Tlie_0767 09b559a0bf35d4273b7b6e8976d956ee 464 SUPERFAMILY SSF53448 8 308 1.44E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_0767 09b559a0bf35d4273b7b6e8976d956ee 464 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 321 355 3.7E-5 T 14-10-2018 IPR001451 Hexapeptide repeat Tlie_0767 09b559a0bf35d4273b7b6e8976d956ee 464 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 291 2.8E-4 T 14-10-2018 IPR001451 Hexapeptide repeat Tlie_0767 09b559a0bf35d4273b7b6e8976d956ee 464 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 399 433 8.5E-9 T 14-10-2018 IPR001451 Hexapeptide repeat Tlie_0767 09b559a0bf35d4273b7b6e8976d956ee 464 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 8 458 3.7E-158 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Tlie_0767 09b559a0bf35d4273b7b6e8976d956ee 464 Gene3D G3DSA:3.90.550.10 1 231 3.2E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_0767 09b559a0bf35d4273b7b6e8976d956ee 464 Gene3D G3DSA:2.160.10.10 233 460 9.3E-67 T 14-10-2018 Tlie_0767 09b559a0bf35d4273b7b6e8976d956ee 464 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 456 36.519 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Tlie_0767 09b559a0bf35d4273b7b6e8976d956ee 464 Pfam PF00483 Nucleotidyl transferase 8 212 3.2E-21 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Tlie_0767 09b559a0bf35d4273b7b6e8976d956ee 464 SUPERFAMILY SSF51161 263 445 6.39E-50 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 161 328 7.0E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 Gene3D G3DSA:2.40.240.60 363 435 8.4E-19 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 365 432 1.2E-14 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 SUPERFAMILY SSF52540 152 334 8.77E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.5E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 SUPERFAMILY SSF82051 2 158 8.76E-58 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 6.6E-134 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 Gene3D G3DSA:3.40.50.300 159 344 9.6E-53 T 14-10-2018 Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 Hamap MF_01454 GTPase Obg [obg]. 2 335 46.3 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 Pfam PF01018 GTP1/OBG 4 158 4.3E-63 T 14-10-2018 IPR006169 GTP1/OBG domain Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.4E-31 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 1.4E-31 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.4E-31 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 1.4E-31 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 SUPERFAMILY SSF102741 371 434 1.83E-14 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 Gene3D G3DSA:2.70.210.12 1 158 6.9E-63 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 Pfam PF09269 Domain of unknown function (DUF1967) 366 432 1.7E-18 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 Tlie_1002 9b0b8d7e1086a46d23916c3ec5f6fba0 441 PIRSF PIRSF002401 1 380 7.0E-139 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type Tlie_1659 17f5abd228634451f156a75b20ad0d7d 273 Gene3D G3DSA:3.10.310.10 4 268 2.2E-70 T 14-10-2018 Tlie_1659 17f5abd228634451f156a75b20ad0d7d 273 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 272 28.363 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tlie_1659 17f5abd228634451f156a75b20ad0d7d 273 SUPERFAMILY SSF54506 128 270 6.28E-24 T 14-10-2018 Tlie_1659 17f5abd228634451f156a75b20ad0d7d 273 Pfam PF01678 Diaminopimelate epimerase 5 121 4.1E-29 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tlie_1659 17f5abd228634451f156a75b20ad0d7d 273 Pfam PF01678 Diaminopimelate epimerase 145 262 4.6E-12 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tlie_1659 17f5abd228634451f156a75b20ad0d7d 273 SUPERFAMILY SSF54506 3 123 1.55E-34 T 14-10-2018 Tlie_1659 17f5abd228634451f156a75b20ad0d7d 273 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 270 5.1E-60 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tlie_1659 17f5abd228634451f156a75b20ad0d7d 273 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tlie_1659 17f5abd228634451f156a75b20ad0d7d 273 Gene3D G3DSA:3.10.310.10 115 259 2.2E-70 T 14-10-2018 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 SMART SM00863 164 213 2.6E-26 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 Gene3D G3DSA:3.40.50.800 526 629 3.4E-36 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 SUPERFAMILY SSF52954 523 625 9.51E-32 T 14-10-2018 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 PRINTS PR01047 Threonyl-tRNA synthetase signature 356 379 2.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 PRINTS PR01047 Threonyl-tRNA synthetase signature 458 486 2.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 PRINTS PR01047 Threonyl-tRNA synthetase signature 501 514 2.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 PRINTS PR01047 Threonyl-tRNA synthetase signature 528 540 2.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 PRINTS PR01047 Threonyl-tRNA synthetase signature 323 351 2.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 SUPERFAMILY SSF55186 60 235 1.83E-66 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 62 628 36.019 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 164 213 8.1E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 SUPERFAMILY SSF55681 237 520 1.4E-97 T 14-10-2018 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 68 624 3.8E-228 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 Gene3D G3DSA:3.30.930.10 217 525 5.0E-131 T 14-10-2018 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 Gene3D G3DSA:3.30.54.20 126 181 1.0E-66 T 14-10-2018 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 Pfam PF03129 Anticodon binding domain 535 624 4.5E-25 T 14-10-2018 IPR004154 Anticodon-binding Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 315 523 1.2E-38 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0727 7b6e57c5248b5a76d40a0eb6793f0dc0 630 Gene3D G3DSA:3.30.980.10 65 216 1.0E-66 T 14-10-2018 Tlie_0020 6eccffce586d419d75fb391022c606ec 231 Gene3D G3DSA:3.40.50.1860 104 215 1.5E-74 T 14-10-2018 Tlie_0020 6eccffce586d419d75fb391022c606ec 231 SUPERFAMILY SSF53681 118 228 6.41E-27 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tlie_0020 6eccffce586d419d75fb391022c606ec 231 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 8.6E-57 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tlie_0020 6eccffce586d419d75fb391022c606ec 231 Gene3D G3DSA:3.40.50.1860 2 222 1.5E-74 T 14-10-2018 Tlie_0020 6eccffce586d419d75fb391022c606ec 231 TIGRFAM TIGR00035 asp_race: aspartate racemase 3 224 1.3E-55 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 Tlie_0020 6eccffce586d419d75fb391022c606ec 231 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 193 203 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tlie_0020 6eccffce586d419d75fb391022c606ec 231 SUPERFAMILY SSF53681 2 114 1.44E-25 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tlie_1341 1d107dfde527aade29f6c481ab976fb1 158 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 157 72.727 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Tlie_1341 1d107dfde527aade29f6c481ab976fb1 158 Pfam PF03477 ATP cone domain 52 137 2.4E-15 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Tlie_1341 1d107dfde527aade29f6c481ab976fb1 158 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.2E-59 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Tlie_0003 af71831fd0ad035b9a9c9cfa3c0cc9b6 353 Gene3D G3DSA:3.40.50.300 6 330 7.9E-65 T 14-10-2018 Tlie_0003 af71831fd0ad035b9a9c9cfa3c0cc9b6 353 SUPERFAMILY SSF52540 1 349 5.27E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0003 af71831fd0ad035b9a9c9cfa3c0cc9b6 353 ProSitePatterns PS00617 RecF protein signature 1. 115 135 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Tlie_0003 af71831fd0ad035b9a9c9cfa3c0cc9b6 353 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 353 55.01 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Tlie_0003 af71831fd0ad035b9a9c9cfa3c0cc9b6 353 Gene3D G3DSA:1.20.1050.90 118 295 7.9E-65 T 14-10-2018 Tlie_0003 af71831fd0ad035b9a9c9cfa3c0cc9b6 353 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 331 3.1E-56 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Tlie_0003 af71831fd0ad035b9a9c9cfa3c0cc9b6 353 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 331 8.7E-19 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Tlie_0649 e7d4b4f9e77c16f9780a68d6e42eaf36 275 Gene3D G3DSA:2.40.50.140 1 114 3.3E-48 T 14-10-2018 Tlie_0649 e7d4b4f9e77c16f9780a68d6e42eaf36 275 PIRSF PIRSF002158 9 275 5.6E-101 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0649 e7d4b4f9e77c16f9780a68d6e42eaf36 275 SMART SM01382 124 252 1.7E-91 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Tlie_0649 e7d4b4f9e77c16f9780a68d6e42eaf36 275 SUPERFAMILY SSF50249 3 125 4.11E-54 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0649 e7d4b4f9e77c16f9780a68d6e42eaf36 275 SUPERFAMILY SSF50104 126 272 2.53E-61 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tlie_0649 e7d4b4f9e77c16f9780a68d6e42eaf36 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 48.745 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Tlie_0649 e7d4b4f9e77c16f9780a68d6e42eaf36 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 4.6E-133 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Tlie_0649 e7d4b4f9e77c16f9780a68d6e42eaf36 275 SMART SM01383 42 118 5.7E-46 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0649 e7d4b4f9e77c16f9780a68d6e42eaf36 275 Gene3D G3DSA:4.10.950.10 197 274 1.4E-34 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0649 e7d4b4f9e77c16f9780a68d6e42eaf36 275 Gene3D G3DSA:2.30.30.30 118 196 6.1E-34 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Tlie_0649 e7d4b4f9e77c16f9780a68d6e42eaf36 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.5E-57 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Tlie_0649 e7d4b4f9e77c16f9780a68d6e42eaf36 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.3E-33 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1017 68388946f46a5dc59b33ec03a1493a55 348 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 15 339 9.6E-58 T 14-10-2018 IPR003770 Endolytic murein transglycosylase Tlie_1017 68388946f46a5dc59b33ec03a1493a55 348 Pfam PF02618 YceG-like family 50 338 2.3E-64 T 14-10-2018 IPR003770 Endolytic murein transglycosylase Tlie_1017 68388946f46a5dc59b33ec03a1493a55 348 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 6 342 26.373 T 14-10-2018 IPR003770 Endolytic murein transglycosylase Tlie_0206 53a7595d5a54a5dd47d141595759ad44 100 Gene3D G3DSA:3.30.70.1710 3 99 4.2E-29 T 14-10-2018 Tlie_0206 53a7595d5a54a5dd47d141595759ad44 100 SUPERFAMILY SSF143414 45 96 2.75E-7 T 14-10-2018 IPR037233 CcmK-like superfamily Tlie_0206 53a7595d5a54a5dd47d141595759ad44 100 Pfam PF00936 BMC domain 45 94 2.6E-9 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0206 53a7595d5a54a5dd47d141595759ad44 100 SMART SM00877 35 100 0.0082 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_1069 1d6f17b346aa5a01cbd2d3822a8f7140 457 SUPERFAMILY SSF54534 89 247 7.86E-13 T 14-10-2018 Tlie_1069 1d6f17b346aa5a01cbd2d3822a8f7140 457 Gene3D G3DSA:1.10.3120.10 252 442 2.9E-37 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Tlie_1069 1d6f17b346aa5a01cbd2d3822a8f7140 457 Gene3D G3DSA:3.10.50.40 154 251 2.2E-10 T 14-10-2018 Tlie_1069 1d6f17b346aa5a01cbd2d3822a8f7140 457 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 271 431 1.6E-27 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Tlie_1069 1d6f17b346aa5a01cbd2d3822a8f7140 457 SUPERFAMILY SSF102735 5 131 2.75E-31 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Tlie_1069 1d6f17b346aa5a01cbd2d3822a8f7140 457 PIRSF PIRSF003095 1 454 2.0E-80 T 14-10-2018 IPR005215 Trigger factor GO:0015031 Tlie_1069 1d6f17b346aa5a01cbd2d3822a8f7140 457 TIGRFAM TIGR00115 tig: trigger factor 13 430 1.2E-88 T 14-10-2018 IPR005215 Trigger factor GO:0015031 Tlie_1069 1d6f17b346aa5a01cbd2d3822a8f7140 457 Pfam PF05697 Bacterial trigger factor protein (TF) 7 144 7.6E-36 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Tlie_1069 1d6f17b346aa5a01cbd2d3822a8f7140 457 Hamap MF_00303 Trigger factor [tig]. 1 437 17.306 T 14-10-2018 IPR005215 Trigger factor GO:0015031 Tlie_1069 1d6f17b346aa5a01cbd2d3822a8f7140 457 SUPERFAMILY SSF109998 257 444 1.7E-30 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily Tlie_1069 1d6f17b346aa5a01cbd2d3822a8f7140 457 Gene3D G3DSA:3.30.70.1050 2 130 8.4E-32 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 SUPERFAMILY SSF50465 304 399 5.76E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 399 2.3E-222 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.2E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 145 7.6E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 400 60.842 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 Pfam PF00009 Elongation factor Tu GTP binding domain 10 206 3.5E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 Pfam PF03143 Elongation factor Tu C-terminal domain 304 398 2.4E-32 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 SUPERFAMILY SSF52540 9 231 1.61E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 Pfam PF03144 Elongation factor Tu domain 2 230 299 3.5E-20 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 SUPERFAMILY SSF50447 210 307 1.75E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 Gene3D G3DSA:2.40.30.10 211 340 1.5E-56 T 14-10-2018 Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 Gene3D G3DSA:2.40.30.10 344 399 4.4E-28 T 14-10-2018 Tlie_0644 c1bbc181d725bfe5e03cf21e619877a3 400 Gene3D G3DSA:3.40.50.300 1 208 6.4E-71 T 14-10-2018 Tlie_1320 5ca88dbaab068f7f45492f1d1671c1b7 451 Gene3D G3DSA:1.10.860.10 2 162 4.5E-56 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Tlie_1320 5ca88dbaab068f7f45492f1d1671c1b7 451 Gene3D G3DSA:3.40.50.300 163 446 5.7E-101 T 14-10-2018 Tlie_1320 5ca88dbaab068f7f45492f1d1671c1b7 451 SUPERFAMILY SSF48024 8 119 1.7E-34 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Tlie_1320 5ca88dbaab068f7f45492f1d1671c1b7 451 Pfam PF03796 DnaB-like helicase C terminal domain 186 445 1.6E-105 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Tlie_1320 5ca88dbaab068f7f45492f1d1671c1b7 451 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 10 446 2.6E-164 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Tlie_1320 5ca88dbaab068f7f45492f1d1671c1b7 451 Pfam PF00772 DnaB-like helicase N terminal domain 10 111 4.5E-33 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Tlie_1320 5ca88dbaab068f7f45492f1d1671c1b7 451 SUPERFAMILY SSF52540 184 438 2.08E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0047 fdc559cbac66394d110ffc6ef857218a 173 Pfam PF00210 Ferritin-like domain 8 144 4.6E-44 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Tlie_0047 fdc559cbac66394d110ffc6ef857218a 173 Gene3D G3DSA:1.20.1260.10 1 170 2.1E-55 T 14-10-2018 IPR012347 Ferritin-like Tlie_0047 fdc559cbac66394d110ffc6ef857218a 173 SUPERFAMILY SSF47240 1 161 1.63E-61 T 14-10-2018 IPR009078 Ferritin-like superfamily Tlie_1914 baa5171f99afa34ce742f1545f788d66 601 SUPERFAMILY SSF48310 211 601 1.28E-138 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1914 baa5171f99afa34ce742f1545f788d66 601 Gene3D G3DSA:1.10.599.10 240 601 3.3E-147 T 14-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Tlie_1914 baa5171f99afa34ce742f1545f788d66 601 SUPERFAMILY SSF56228 6 207 2.62E-74 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_1914 baa5171f99afa34ce742f1545f788d66 601 Gene3D G3DSA:1.10.569.10 242 428 3.3E-147 T 14-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Tlie_1914 baa5171f99afa34ce742f1545f788d66 601 Gene3D G3DSA:3.60.9.10 2 209 4.7E-89 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_1914 baa5171f99afa34ce742f1545f788d66 601 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 6 204 1.4E-79 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1914 baa5171f99afa34ce742f1545f788d66 601 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 221 601 4.3E-138 T 14-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1914 baa5171f99afa34ce742f1545f788d66 601 SMART SM00790 3 206 2.0E-116 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_0208 45c1a62ead0978c0eaf3057408f7ca56 340 Gene3D G3DSA:3.30.450.150 203 339 2.0E-48 T 14-10-2018 IPR038084 GlcG-like domain superfamily Tlie_0208 45c1a62ead0978c0eaf3057408f7ca56 340 Gene3D G3DSA:1.20.1200.10 13 190 2.1E-33 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Tlie_0208 45c1a62ead0978c0eaf3057408f7ca56 340 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 170 1.4E-32 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Tlie_0208 45c1a62ead0978c0eaf3057408f7ca56 340 SUPERFAMILY SSF89028 2 172 1.51E-33 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Tlie_0208 45c1a62ead0978c0eaf3057408f7ca56 340 Pfam PF01923 Cobalamin adenosyltransferase 3 168 8.6E-39 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Tlie_0208 45c1a62ead0978c0eaf3057408f7ca56 340 SUPERFAMILY SSF143744 206 335 4.05E-39 T 14-10-2018 IPR038084 GlcG-like domain superfamily Tlie_0208 45c1a62ead0978c0eaf3057408f7ca56 340 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 182 3.0E-14 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Tlie_0208 45c1a62ead0978c0eaf3057408f7ca56 340 Pfam PF03928 Haem-degrading 211 334 3.1E-33 T 14-10-2018 IPR005624 Haem-degrading Tlie_1472 19715906163cf9ff567af3aee6c6fbfe 374 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 200 237 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tlie_1472 19715906163cf9ff567af3aee6c6fbfe 374 PIRSF PIRSF000521 85 146 7.0E-4 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tlie_1472 19715906163cf9ff567af3aee6c6fbfe 374 PIRSF PIRSF000521 10 112 1.0E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tlie_1472 19715906163cf9ff567af3aee6c6fbfe 374 PIRSF PIRSF000521 153 373 9.0E-26 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tlie_1472 19715906163cf9ff567af3aee6c6fbfe 374 Gene3D G3DSA:3.90.1150.10 12 363 2.2E-107 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1472 19715906163cf9ff567af3aee6c6fbfe 374 SUPERFAMILY SSF53383 7 371 3.84E-94 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1472 19715906163cf9ff567af3aee6c6fbfe 374 Pfam PF00202 Aminotransferase class-III 11 370 5.3E-91 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tlie_1472 19715906163cf9ff567af3aee6c6fbfe 374 Gene3D G3DSA:3.40.640.10 45 281 2.2E-107 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1150 8f7f4368180e4656aceccef139fe6be1 197 Gene3D G3DSA:3.40.50.170 1 196 1.7E-73 T 14-10-2018 Tlie_1150 8f7f4368180e4656aceccef139fe6be1 197 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 186 1.0E-64 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Tlie_1150 8f7f4368180e4656aceccef139fe6be1 197 SUPERFAMILY SSF53328 4 187 9.94E-57 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tlie_1150 8f7f4368180e4656aceccef139fe6be1 197 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 186 30.962 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Tlie_1150 8f7f4368180e4656aceccef139fe6be1 197 Pfam PF00551 Formyl transferase 4 180 2.7E-54 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tlie_1150 8f7f4368180e4656aceccef139fe6be1 197 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 132 155 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tlie_0195 b8d22126f72d3f6a830ff03a572765b7 268 SUPERFAMILY SSF143414 183 254 3.53E-11 T 14-10-2018 IPR037233 CcmK-like superfamily Tlie_0195 b8d22126f72d3f6a830ff03a572765b7 268 PIRSF PIRSF012290 23 268 2.3E-88 T 14-10-2018 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0031469 Tlie_0195 b8d22126f72d3f6a830ff03a572765b7 268 Gene3D G3DSA:3.30.70.1810 58 150 4.5E-39 T 14-10-2018 Tlie_0195 b8d22126f72d3f6a830ff03a572765b7 268 SUPERFAMILY SSF143414 77 155 2.22E-8 T 14-10-2018 IPR037233 CcmK-like superfamily Tlie_0195 b8d22126f72d3f6a830ff03a572765b7 268 SMART SM00877 183 259 3.0E-14 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0195 b8d22126f72d3f6a830ff03a572765b7 268 SMART SM00877 77 159 1.7E-8 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0195 b8d22126f72d3f6a830ff03a572765b7 268 Gene3D G3DSA:3.30.70.1810 151 242 4.5E-39 T 14-10-2018 Tlie_0195 b8d22126f72d3f6a830ff03a572765b7 268 TIGRFAM TIGR04501 microcomp_PduB: microcompartment protein PduB 44 268 2.8E-117 T 14-10-2018 IPR030984 Microcompartment protein PduB GO:0005198 Tlie_0195 b8d22126f72d3f6a830ff03a572765b7 268 Pfam PF00936 BMC domain 184 250 3.5E-13 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0195 b8d22126f72d3f6a830ff03a572765b7 268 Pfam PF00936 BMC domain 78 147 1.1E-8 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_1100 4ea442502665df284d39427b3e5ec285 83 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 36 78 0.002 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Tlie_1100 4ea442502665df284d39427b3e5ec285 83 Gene3D G3DSA:1.10.1200.10 1 81 3.3E-29 T 14-10-2018 IPR036736 ACP-like superfamily Tlie_1100 4ea442502665df284d39427b3e5ec285 83 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 22.183 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Tlie_1100 4ea442502665df284d39427b3e5ec285 83 Pfam PF00550 Phosphopantetheine attachment site 9 75 1.5E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Tlie_1100 4ea442502665df284d39427b3e5ec285 83 ProSitePatterns PS00012 Phosphopantetheine attachment site. 34 49 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Tlie_1100 4ea442502665df284d39427b3e5ec285 83 SUPERFAMILY SSF47336 1 79 6.54E-24 T 14-10-2018 IPR036736 ACP-like superfamily Tlie_1100 4ea442502665df284d39427b3e5ec285 83 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 3 78 9.5E-34 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Tlie_1116 b96bae7f048b95a95e093f29b7a402b2 388 SUPERFAMILY SSF52518 6 251 3.78E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1116 b96bae7f048b95a95e093f29b7a402b2 388 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 16 239 2.5E-67 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Tlie_1116 b96bae7f048b95a95e093f29b7a402b2 388 SUPERFAMILY SSF52922 253 375 8.42E-32 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_1116 b96bae7f048b95a95e093f29b7a402b2 388 Gene3D G3DSA:3.40.50.970 1 252 3.5E-91 T 14-10-2018 Tlie_1116 b96bae7f048b95a95e093f29b7a402b2 388 Gene3D G3DSA:3.40.50.920 253 387 5.0E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_1116 b96bae7f048b95a95e093f29b7a402b2 388 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 262 364 1.6E-28 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Tlie_1695 9956b27af6349a2a13c42227bd2e3819 187 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 159 2.2E-18 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Tlie_1279 5873c1ae23617de6adece32b4c062560 299 Pfam PF01497 Periplasmic binding protein 40 269 1.1E-27 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Tlie_1279 5873c1ae23617de6adece32b4c062560 299 SUPERFAMILY SSF53807 34 287 1.49E-42 T 14-10-2018 Tlie_1279 5873c1ae23617de6adece32b4c062560 299 Gene3D G3DSA:3.40.50.1980 158 289 4.6E-19 T 14-10-2018 Tlie_1279 5873c1ae23617de6adece32b4c062560 299 Gene3D G3DSA:3.40.50.1980 27 154 1.8E-21 T 14-10-2018 Tlie_0280 86ba4bbf431c8872a37617be6472d01f 249 Gene3D G3DSA:3.30.1360.40 9 90 5.1E-24 T 14-10-2018 Tlie_0280 86ba4bbf431c8872a37617be6472d01f 249 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 9 208 4.1E-81 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Tlie_0280 86ba4bbf431c8872a37617be6472d01f 249 Gene3D G3DSA:2.40.100.10 94 233 1.3E-60 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Tlie_0280 86ba4bbf431c8872a37617be6472d01f 249 SUPERFAMILY SSF50891 95 225 1.29E-50 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Tlie_0280 86ba4bbf431c8872a37617be6472d01f 249 SUPERFAMILY SSF160467 9 100 1.83E-21 T 14-10-2018 Tlie_0280 86ba4bbf431c8872a37617be6472d01f 249 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 14 217 4.0E-68 T 14-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Tlie_0280 86ba4bbf431c8872a37617be6472d01f 249 SMART SM00796 8 209 5.0E-108 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Tlie_1231 2fa45ea29d8130f045313a29dc175feb 414 Pfam PF00390 Malic enzyme, N-terminal domain 24 148 9.6E-18 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Tlie_1231 2fa45ea29d8130f045313a29dc175feb 414 SMART SM00919 161 384 6.1E-78 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Tlie_1231 2fa45ea29d8130f045313a29dc175feb 414 SMART SM01274 16 149 2.8E-53 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Tlie_1231 2fa45ea29d8130f045313a29dc175feb 414 SUPERFAMILY SSF53223 9 159 3.53E-43 T 14-10-2018 Tlie_1231 2fa45ea29d8130f045313a29dc175feb 414 Gene3D G3DSA:3.40.50.720 159 410 1.0E-67 T 14-10-2018 Tlie_1231 2fa45ea29d8130f045313a29dc175feb 414 PIRSF PIRSF000106 36 412 2.2E-64 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Tlie_1231 2fa45ea29d8130f045313a29dc175feb 414 Gene3D G3DSA:3.40.50.10380 3 158 5.5E-58 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Tlie_1231 2fa45ea29d8130f045313a29dc175feb 414 SUPERFAMILY SSF51735 161 407 1.55E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1231 2fa45ea29d8130f045313a29dc175feb 414 Pfam PF03949 Malic enzyme, NAD binding domain 163 383 6.0E-21 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Tlie_0373 2b8446a9e3961bdb3188f9fa0c78152d 305 SMART SM01221 182 296 1.6E-65 T 14-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_0373 2b8446a9e3961bdb3188f9fa0c78152d 305 Pfam PF02971 Formiminotransferase domain 182 284 1.1E-26 T 14-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_0373 2b8446a9e3961bdb3188f9fa0c78152d 305 TIGRFAM TIGR02024 FtcD: glutamate formiminotransferase 3 298 3.7E-123 T 14-10-2018 IPR004227 Formiminotransferase catalytic domain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_0373 2b8446a9e3961bdb3188f9fa0c78152d 305 Pfam PF07837 Formiminotransferase domain, N-terminal subdomain 5 180 7.3E-70 T 14-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Tlie_0373 2b8446a9e3961bdb3188f9fa0c78152d 305 Gene3D G3DSA:3.30.70.670 183 303 8.9E-36 T 14-10-2018 IPR037070 Formiminotransferase, C-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_0373 2b8446a9e3961bdb3188f9fa0c78152d 305 SUPERFAMILY SSF55116 4 180 7.59E-66 T 14-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Tlie_0373 2b8446a9e3961bdb3188f9fa0c78152d 305 SUPERFAMILY SSF55116 182 298 1.36E-41 T 14-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Tlie_0373 2b8446a9e3961bdb3188f9fa0c78152d 305 SMART SM01222 4 181 8.3E-102 T 14-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Tlie_0373 2b8446a9e3961bdb3188f9fa0c78152d 305 Gene3D G3DSA:3.30.990.10 2 182 5.9E-68 T 14-10-2018 IPR037064 Formiminotransferase, N-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Tlie_1558 ef24cfd1f303c6d6d4279efcee810efc 338 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 310 2.3E-50 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Tlie_1558 ef24cfd1f303c6d6d4279efcee810efc 338 Gene3D G3DSA:3.40.190.100 115 245 8.4E-56 T 14-10-2018 Tlie_1558 ef24cfd1f303c6d6d4279efcee810efc 338 Gene3D G3DSA:3.40.190.10 32 320 8.4E-56 T 14-10-2018 Tlie_1558 ef24cfd1f303c6d6d4279efcee810efc 338 SUPERFAMILY SSF53850 27 323 3.47E-66 T 14-10-2018 Tlie_0488 f08192b421aee5a0be98da693a567033 729 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 423 429 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Tlie_0488 f08192b421aee5a0be98da693a567033 729 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 171 720 3.8E-163 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tlie_0488 f08192b421aee5a0be98da693a567033 729 Pfam PF00122 E1-E2 ATPase 221 399 7.1E-45 T 14-10-2018 Tlie_0488 f08192b421aee5a0be98da693a567033 729 Gene3D G3DSA:3.40.50.1000 402 671 1.8E-75 T 14-10-2018 IPR023214 HAD superfamily Tlie_0488 f08192b421aee5a0be98da693a567033 729 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 171 722 2.3E-146 T 14-10-2018 Tlie_0488 f08192b421aee5a0be98da693a567033 729 Gene3D G3DSA:3.30.70.100 10 79 1.3E-8 T 14-10-2018 Tlie_0488 f08192b421aee5a0be98da693a567033 729 SUPERFAMILY SSF56784 419 719 2.47E-49 T 14-10-2018 IPR036412 HAD-like superfamily Tlie_0488 f08192b421aee5a0be98da693a567033 729 Gene3D G3DSA:2.70.150.20 212 324 2.9E-28 T 14-10-2018 Tlie_0488 f08192b421aee5a0be98da693a567033 729 Pfam PF00403 Heavy-metal-associated domain 17 58 3.9E-7 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Tlie_0488 f08192b421aee5a0be98da693a567033 729 PRINTS PR00941 Cadmium-transporting ATPase signature 25 46 3.6E-9 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tlie_0488 f08192b421aee5a0be98da693a567033 729 PRINTS PR00941 Cadmium-transporting ATPase signature 304 318 3.6E-9 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tlie_0488 f08192b421aee5a0be98da693a567033 729 PRINTS PR00941 Cadmium-transporting ATPase signature 204 224 3.6E-9 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tlie_0488 f08192b421aee5a0be98da693a567033 729 PRINTS PR00941 Cadmium-transporting ATPase signature 285 301 3.6E-9 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tlie_0488 f08192b421aee5a0be98da693a567033 729 PRINTS PR00941 Cadmium-transporting ATPase signature 14 23 3.6E-9 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tlie_0488 f08192b421aee5a0be98da693a567033 729 Pfam PF00702 haloacid dehalogenase-like hydrolase 417 628 4.4E-29 T 14-10-2018 Tlie_0488 f08192b421aee5a0be98da693a567033 729 SUPERFAMILY SSF81653 222 319 1.01E-21 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Tlie_0488 f08192b421aee5a0be98da693a567033 729 SUPERFAMILY SSF81665 164 718 7.85E-10 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Tlie_0488 f08192b421aee5a0be98da693a567033 729 Gene3D G3DSA:3.40.1110.10 432 546 1.8E-75 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Tlie_0488 f08192b421aee5a0be98da693a567033 729 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 191 698 3.8E-70 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tlie_0488 f08192b421aee5a0be98da693a567033 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 654 3.5E-18 T 14-10-2018 Tlie_0488 f08192b421aee5a0be98da693a567033 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 618 637 3.5E-18 T 14-10-2018 Tlie_0488 f08192b421aee5a0be98da693a567033 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 421 435 3.5E-18 T 14-10-2018 Tlie_0488 f08192b421aee5a0be98da693a567033 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 269 283 3.5E-18 T 14-10-2018 Tlie_0488 f08192b421aee5a0be98da693a567033 729 SUPERFAMILY SSF55008 13 76 4.71E-10 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Tlie_1364 fb685072fd7eca50f2c45c91f75dbee7 539 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 375 489 1.5E-28 T 14-10-2018 IPR025299 CstA, C-terminal domain Tlie_1364 fb685072fd7eca50f2c45c91f75dbee7 539 Pfam PF02554 Carbon starvation protein CstA 5 344 9.1E-114 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 Tlie_0461 4ea05f876706888ed253bc10119b83cd 1174 SUPERFAMILY SSF53335 713 913 1.59E-10 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_0461 4ea05f876706888ed253bc10119b83cd 1174 Pfam PF06634 Protein of unknown function (DUF1156) 56 103 2.0E-4 T 14-10-2018 IPR009537 Domain of unknown function DUF1156 Tlie_0461 4ea05f876706888ed253bc10119b83cd 1174 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 726 732 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tlie_0461 4ea05f876706888ed253bc10119b83cd 1174 SUPERFAMILY SSF53335 130 170 3.83E-9 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_0461 4ea05f876706888ed253bc10119b83cd 1174 Gene3D G3DSA:3.40.50.150 75 189 2.5E-8 T 14-10-2018 Tlie_1421 82bbdfd42c6c3ed23a46d4d9b0dcd14e 416 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 2 222 6.2E-88 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Tlie_1421 82bbdfd42c6c3ed23a46d4d9b0dcd14e 416 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 289 91.559 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Tlie_1421 82bbdfd42c6c3ed23a46d4d9b0dcd14e 416 SUPERFAMILY SSF75217 2 229 9.16E-88 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Tlie_1421 82bbdfd42c6c3ed23a46d4d9b0dcd14e 416 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 24 218 6.6E-58 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Tlie_1421 82bbdfd42c6c3ed23a46d4d9b0dcd14e 416 Gene3D G3DSA:1.10.1270.20 170 243 2.6E-26 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Tlie_1421 82bbdfd42c6c3ed23a46d4d9b0dcd14e 416 Gene3D G3DSA:3.40.1280.10 1 169 2.9E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tlie_1703 9e223731861442b424297559a9be3022 301 Pfam PF01515 Phosphate acetyl/butaryl transferase 81 295 3.8E-44 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Tlie_1703 9e223731861442b424297559a9be3022 301 SUPERFAMILY SSF53659 15 299 2.51E-60 T 14-10-2018 Tlie_1703 9e223731861442b424297559a9be3022 301 PIRSF PIRSF000428 3 301 1.3E-79 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Tlie_1703 9e223731861442b424297559a9be3022 301 Gene3D G3DSA:3.40.718.10 5 300 2.8E-99 T 14-10-2018 Tlie_0798 a83c2cf2ab0ff03ed0fc79ba3c9c473e 354 SMART SM00471 187 322 2.3E-9 T 14-10-2018 IPR003607 HD/PDEase domain Tlie_0798 a83c2cf2ab0ff03ed0fc79ba3c9c473e 354 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 36 155 3.6E-22 T 14-10-2018 IPR000014 PAS domain Tlie_0798 a83c2cf2ab0ff03ed0fc79ba3c9c473e 354 SMART SM00091 34 100 1.8E-7 T 14-10-2018 IPR000014 PAS domain Tlie_0798 a83c2cf2ab0ff03ed0fc79ba3c9c473e 354 SUPERFAMILY SSF109604 181 349 1.66E-37 T 14-10-2018 Tlie_0798 a83c2cf2ab0ff03ed0fc79ba3c9c473e 354 Gene3D G3DSA:3.30.450.20 31 165 1.7E-23 T 14-10-2018 Tlie_0798 a83c2cf2ab0ff03ed0fc79ba3c9c473e 354 Pfam PF13487 HD domain 242 304 1.3E-20 T 14-10-2018 Tlie_0798 a83c2cf2ab0ff03ed0fc79ba3c9c473e 354 Gene3D G3DSA:1.10.3210.10 166 352 5.0E-65 T 14-10-2018 Tlie_0798 a83c2cf2ab0ff03ed0fc79ba3c9c473e 354 SUPERFAMILY SSF55785 39 151 8.9E-23 T 14-10-2018 IPR035965 PAS domain superfamily Tlie_0798 a83c2cf2ab0ff03ed0fc79ba3c9c473e 354 Pfam PF13426 PAS domain 45 147 3.1E-12 T 14-10-2018 IPR000014 PAS domain Tlie_0957 6db48eec02c58c30a8f1ea9095bad876 275 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 52 199 4.7E-38 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tlie_0957 6db48eec02c58c30a8f1ea9095bad876 275 SUPERFAMILY SSF52518 15 265 3.46E-77 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_0957 6db48eec02c58c30a8f1ea9095bad876 275 Gene3D G3DSA:3.40.50.970 81 248 2.9E-31 T 14-10-2018 Tlie_1250 0a2848db50882d74daac89224fd5275e 693 Gene3D G3DSA:3.30.230.10 479 682 3.1E-97 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tlie_1250 0a2848db50882d74daac89224fd5275e 693 SMART SM00838 595 682 3.2E-51 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Tlie_1250 0a2848db50882d74daac89224fd5275e 693 SUPERFAMILY SSF54980 595 689 4.41E-30 T 14-10-2018 IPR035647 EF-G domain III/V-like Tlie_1250 0a2848db50882d74daac89224fd5275e 693 Gene3D G3DSA:2.40.30.10 290 400 2.5E-30 T 14-10-2018 Tlie_1250 0a2848db50882d74daac89224fd5275e 693 Pfam PF03144 Elongation factor Tu domain 2 319 386 1.3E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tlie_1250 0a2848db50882d74daac89224fd5275e 693 PRINTS PR00315 GTP-binding elongation factor signature 93 104 4.0E-7 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1250 0a2848db50882d74daac89224fd5275e 693 PRINTS PR00315 GTP-binding elongation factor signature 77 87 4.0E-7 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1250 0a2848db50882d74daac89224fd5275e 693 PRINTS PR00315 GTP-binding elongation factor signature 129 138 4.0E-7 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1250 0a2848db50882d74daac89224fd5275e 693 PRINTS PR00315 GTP-binding elongation factor signature 57 65 4.0E-7 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1250 0a2848db50882d74daac89224fd5275e 693 PRINTS PR00315 GTP-binding elongation factor signature 11 24 4.0E-7 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1250 0a2848db50882d74daac89224fd5275e 693 Pfam PF14492 Elongation Factor G, domain II 399 472 1.7E-29 T 14-10-2018 Tlie_1250 0a2848db50882d74daac89224fd5275e 693 Gene3D G3DSA:3.30.70.240 599 669 3.1E-97 T 14-10-2018 Tlie_1250 0a2848db50882d74daac89224fd5275e 693 Gene3D G3DSA:3.40.50.300 5 289 4.1E-81 T 14-10-2018 Tlie_1250 0a2848db50882d74daac89224fd5275e 693 Gene3D G3DSA:3.30.70.870 401 478 1.4E-25 T 14-10-2018 Tlie_1250 0a2848db50882d74daac89224fd5275e 693 SMART SM00889 475 593 4.5E-72 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Tlie_1250 0a2848db50882d74daac89224fd5275e 693 SUPERFAMILY SSF50447 263 399 3.26E-27 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tlie_1250 0a2848db50882d74daac89224fd5275e 693 Pfam PF00009 Elongation factor Tu GTP binding domain 8 279 2.1E-39 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1250 0a2848db50882d74daac89224fd5275e 693 SUPERFAMILY SSF54211 474 594 3.79E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_1250 0a2848db50882d74daac89224fd5275e 693 SUPERFAMILY SSF52540 6 279 7.12E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1250 0a2848db50882d74daac89224fd5275e 693 TIGRFAM TIGR00484 EF-G: translation elongation factor G 7 686 8.0E-227 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tlie_1250 0a2848db50882d74daac89224fd5275e 693 Pfam PF00679 Elongation factor G C-terminus 595 681 1.4E-31 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Tlie_1250 0a2848db50882d74daac89224fd5275e 693 SUPERFAMILY SSF54980 399 477 3.56E-22 T 14-10-2018 IPR035647 EF-G domain III/V-like Tlie_1250 0a2848db50882d74daac89224fd5275e 693 Pfam PF03764 Elongation factor G, domain IV 474 593 1.0E-46 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Tlie_0947 38cfb6878dc866e9f0a16512d6cff16c 521 Pfam PF03853 YjeF-related protein N-terminus 26 192 8.1E-45 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Tlie_0947 38cfb6878dc866e9f0a16512d6cff16c 521 Gene3D G3DSA:3.40.50.10260 2 214 4.5E-60 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Tlie_0947 38cfb6878dc866e9f0a16512d6cff16c 521 Gene3D G3DSA:3.40.1190.20 230 513 9.4E-66 T 14-10-2018 IPR029056 Ribokinase-like Tlie_0947 38cfb6878dc866e9f0a16512d6cff16c 521 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 233 514 19.311 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Tlie_0947 38cfb6878dc866e9f0a16512d6cff16c 521 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 237 509 3.2E-53 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Tlie_0947 38cfb6878dc866e9f0a16512d6cff16c 521 SUPERFAMILY SSF64153 2 211 9.02E-58 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Tlie_0947 38cfb6878dc866e9f0a16512d6cff16c 521 SUPERFAMILY SSF53613 237 509 3.27E-53 T 14-10-2018 IPR029056 Ribokinase-like Tlie_0947 38cfb6878dc866e9f0a16512d6cff16c 521 PIRSF PIRSF017184 1 516 9.6E-109 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 Tlie_0947 38cfb6878dc866e9f0a16512d6cff16c 521 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 5 213 23.614 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Tlie_0947 38cfb6878dc866e9f0a16512d6cff16c 521 Pfam PF01256 Carbohydrate kinase 256 505 1.5E-43 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Tlie_0947 38cfb6878dc866e9f0a16512d6cff16c 521 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 7 206 2.2E-44 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Tlie_0786 8ecf0caf388e50afb586ee28514cde19 354 SMART SM00471 74 212 1.4E-12 T 14-10-2018 IPR003607 HD/PDEase domain Tlie_0786 8ecf0caf388e50afb586ee28514cde19 354 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 41 172 2.0E-51 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 Tlie_0786 8ecf0caf388e50afb586ee28514cde19 354 Pfam PF13286 Phosphohydrolase-associated domain 253 335 1.6E-16 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain Tlie_0786 8ecf0caf388e50afb586ee28514cde19 354 Pfam PF01966 HD domain 78 202 4.1E-16 T 14-10-2018 IPR006674 HD domain Tlie_0786 8ecf0caf388e50afb586ee28514cde19 354 SUPERFAMILY SSF109604 30 342 6.28E-77 T 14-10-2018 Tlie_0786 8ecf0caf388e50afb586ee28514cde19 354 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 18 337 30.108 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 Tlie_0786 8ecf0caf388e50afb586ee28514cde19 354 Gene3D G3DSA:1.10.3210.10 4 338 2.4E-108 T 14-10-2018 Tlie_0505 c1b28574df2609c86fd4267fea0a047d 1489 Gene3D G3DSA:3.30.420.40 102 262 1.5E-32 T 14-10-2018 Tlie_0505 c1b28574df2609c86fd4267fea0a047d 1489 Gene3D G3DSA:3.30.420.40 450 600 3.6E-57 T 14-10-2018 Tlie_0505 c1b28574df2609c86fd4267fea0a047d 1489 SUPERFAMILY SSF53067 4 277 2.16E-14 T 14-10-2018 Tlie_0505 c1b28574df2609c86fd4267fea0a047d 1489 SUPERFAMILY SSF53067 340 614 8.19E-27 T 14-10-2018 Tlie_0505 c1b28574df2609c86fd4267fea0a047d 1489 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 726 934 4.9E-36 T 14-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 Tlie_0505 c1b28574df2609c86fd4267fea0a047d 1489 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 994 1196 7.1E-11 T 14-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit Tlie_0505 c1b28574df2609c86fd4267fea0a047d 1489 Gene3D G3DSA:3.30.420.40 341 614 3.6E-57 T 14-10-2018 Tlie_0505 c1b28574df2609c86fd4267fea0a047d 1489 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 341 614 1.0E-18 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Tlie_0505 c1b28574df2609c86fd4267fea0a047d 1489 Gene3D G3DSA:3.30.420.40 6 277 1.5E-32 T 14-10-2018 Tlie_0034 8921f5fcb5ede8afc69205cf5f31d967 181 Gene3D G3DSA:1.10.1760.20 3 178 3.1E-42 T 14-10-2018 Tlie_0034 8921f5fcb5ede8afc69205cf5f31d967 181 PIRSF PIRSF037778 1 179 4.6E-35 T 14-10-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 Tlie_0034 8921f5fcb5ede8afc69205cf5f31d967 181 Pfam PF12822 ECF transporter, substrate-specific component 7 169 2.9E-15 T 14-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 Tlie_1538 ba8bea98de7e36e39adb7571f7f99ebf 291 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_1538 ba8bea98de7e36e39adb7571f7f99ebf 291 Pfam PF14697 4Fe-4S dicluster domain 63 116 5.6E-10 T 14-10-2018 Tlie_1538 ba8bea98de7e36e39adb7571f7f99ebf 291 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 267 9.1E-20 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tlie_1538 ba8bea98de7e36e39adb7571f7f99ebf 291 Gene3D G3DSA:3.30.70.20 55 139 5.2E-14 T 14-10-2018 Tlie_1538 ba8bea98de7e36e39adb7571f7f99ebf 291 SUPERFAMILY SSF52540 3 265 4.78E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1226 b2249632a7808a27d691d5f5d52a47b4 722 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 258 703 1.6E-110 T 14-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1226 b2249632a7808a27d691d5f5d52a47b4 722 SUPERFAMILY SSF48310 670 705 2.35E-7 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1226 b2249632a7808a27d691d5f5d52a47b4 722 SUPERFAMILY SSF56228 19 240 4.97E-41 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_1226 b2249632a7808a27d691d5f5d52a47b4 722 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 23 238 1.0E-50 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1226 b2249632a7808a27d691d5f5d52a47b4 722 SUPERFAMILY SSF48310 262 667 2.09E-64 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1226 b2249632a7808a27d691d5f5d52a47b4 722 Gene3D G3DSA:3.60.9.10 19 242 7.5E-54 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_1226 b2249632a7808a27d691d5f5d52a47b4 722 SMART SM00790 21 241 1.7E-35 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 482 1.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 1.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 1.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 444 1.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 SMART SM00073 3 99 1.5E-23 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 Pfam PF01584 CheW-like domain 533 658 9.1E-23 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 Gene3D G3DSA:1.10.287.560 280 340 4.7E-20 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 Gene3D G3DSA:2.30.30.40 528 654 1.1E-36 T 14-10-2018 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 SUPERFAMILY SSF47226 2 124 6.28E-28 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 Pfam PF01627 Hpt domain 10 102 8.0E-16 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 SMART SM00260 520 659 2.3E-25 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 281 339 5.2E-16 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 Gene3D G3DSA:3.30.565.10 341 527 1.5E-59 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 SUPERFAMILY SSF55874 343 525 7.73E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 389 526 1.4E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 SUPERFAMILY SSF47384 281 341 9.02E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 SUPERFAMILY SSF50341 527 657 1.01E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 SMART SM01231 280 340 9.5E-20 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 Gene3D G3DSA:1.20.120.160 1 142 3.8E-33 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 Gene3D G3DSA:3.30.70.1110 152 236 2.0E-17 T 14-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 Pfam PF07194 P2 response regulator binding domain 156 234 1.5E-19 T 14-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 Gene3D G3DSA:2.40.50.180 551 613 1.1E-36 T 14-10-2018 Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 SMART SM00387 385 528 1.9E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_0084 63ad2337cf7f5ab5b6fba491b3a95557 661 SUPERFAMILY SSF55052 155 234 3.92E-17 T 14-10-2018 IPR035891 CheY-binding domain of CheA Tlie_0998 c0e3dfd0a5759b2a410d95e4072a7001 342 SUPERFAMILY SSF53774 3 333 1.02E-92 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 Tlie_0998 c0e3dfd0a5759b2a410d95e4072a7001 342 PIRSF PIRSF500176 2 328 5.0E-91 T 14-10-2018 Tlie_0998 c0e3dfd0a5759b2a410d95e4072a7001 342 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 331 5.4E-89 T 14-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 Tlie_0998 c0e3dfd0a5759b2a410d95e4072a7001 342 Gene3D G3DSA:3.40.50.1170 2 202 8.1E-63 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 Tlie_0998 c0e3dfd0a5759b2a410d95e4072a7001 342 Pfam PF00710 Asparaginase, N-terminal 4 189 6.7E-56 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 Tlie_0998 c0e3dfd0a5759b2a410d95e4072a7001 342 PIRSF PIRSF001220 1 330 8.4E-88 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Tlie_0998 c0e3dfd0a5759b2a410d95e4072a7001 342 SMART SM00870 4 319 3.6E-105 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Tlie_0998 c0e3dfd0a5759b2a410d95e4072a7001 342 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 7 15 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 Tlie_0998 c0e3dfd0a5759b2a410d95e4072a7001 342 Gene3D G3DSA:3.40.50.40 203 338 3.3E-41 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 Tlie_0998 c0e3dfd0a5759b2a410d95e4072a7001 342 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 4.3E-12 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Tlie_0998 c0e3dfd0a5759b2a410d95e4072a7001 342 PRINTS PR00139 Asparaginase/glutaminase family signature 80 98 4.3E-12 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Tlie_0998 c0e3dfd0a5759b2a410d95e4072a7001 342 PRINTS PR00139 Asparaginase/glutaminase family signature 256 274 4.3E-12 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Tlie_0998 c0e3dfd0a5759b2a410d95e4072a7001 342 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 81 91 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 Tlie_0580 8d520c2690f846c457b83ab661b87d30 482 SMART SM00959 73 115 1.5E-10 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Tlie_0580 8d520c2690f846c457b83ab661b87d30 482 SUPERFAMILY SSF50249 119 191 1.54E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0580 8d520c2690f846c457b83ab661b87d30 482 SUPERFAMILY SSF68912 70 113 9.81E-9 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Tlie_0580 8d520c2690f846c457b83ab661b87d30 482 Hamap MF_01884 Transcription termination factor Rho [rho]. 69 482 206.401 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Tlie_0580 8d520c2690f846c457b83ab661b87d30 482 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 222 426 2.4E-20 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0580 8d520c2690f846c457b83ab661b87d30 482 Pfam PF07497 Rho termination factor, RNA-binding domain 121 191 7.7E-28 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Tlie_0580 8d520c2690f846c457b83ab661b87d30 482 Gene3D G3DSA:1.10.720.10 65 113 3.3E-11 T 14-10-2018 Tlie_0580 8d520c2690f846c457b83ab661b87d30 482 TIGRFAM TIGR00767 rho: transcription termination factor Rho 71 480 2.9E-198 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Tlie_0580 8d520c2690f846c457b83ab661b87d30 482 SUPERFAMILY SSF52540 158 434 2.92E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0580 8d520c2690f846c457b83ab661b87d30 482 SMART SM00382 233 418 2.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0580 8d520c2690f846c457b83ab661b87d30 482 Pfam PF07498 Rho termination factor, N-terminal domain 73 112 1.2E-11 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Tlie_0580 8d520c2690f846c457b83ab661b87d30 482 Gene3D G3DSA:2.40.50.140 114 189 1.5E-27 T 14-10-2018 Tlie_0580 8d520c2690f846c457b83ab661b87d30 482 SMART SM00357 120 184 8.1E-15 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Tlie_0580 8d520c2690f846c457b83ab661b87d30 482 Gene3D G3DSA:3.40.50.300 197 480 2.5E-128 T 14-10-2018 Tlie_0181 c6897905ccd53addfd12f4f52ce8e95d 302 SUPERFAMILY SSF55073 147 300 3.84E-46 T 14-10-2018 IPR029787 Nucleotide cyclase Tlie_0181 c6897905ccd53addfd12f4f52ce8e95d 302 Pfam PF00989 PAS fold 9 119 7.9E-15 T 14-10-2018 IPR013767 PAS fold GO:0006355 Tlie_0181 c6897905ccd53addfd12f4f52ce8e95d 302 SMART SM00267 131 302 4.8E-58 T 14-10-2018 IPR000160 GGDEF domain Tlie_0181 c6897905ccd53addfd12f4f52ce8e95d 302 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 131 4.0E-18 T 14-10-2018 IPR000014 PAS domain Tlie_0181 c6897905ccd53addfd12f4f52ce8e95d 302 Gene3D G3DSA:3.30.70.270 139 301 7.7E-53 T 14-10-2018 Tlie_0181 c6897905ccd53addfd12f4f52ce8e95d 302 Gene3D G3DSA:3.30.450.20 5 138 1.2E-26 T 14-10-2018 Tlie_0181 c6897905ccd53addfd12f4f52ce8e95d 302 SMART SM00091 8 76 6.4E-7 T 14-10-2018 IPR000014 PAS domain Tlie_0181 c6897905ccd53addfd12f4f52ce8e95d 302 SUPERFAMILY SSF55785 7 118 9.6E-24 T 14-10-2018 IPR035965 PAS domain superfamily Tlie_0181 c6897905ccd53addfd12f4f52ce8e95d 302 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 298 7.6E-45 T 14-10-2018 IPR000160 GGDEF domain Tlie_0181 c6897905ccd53addfd12f4f52ce8e95d 302 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 138 301 5.3E-46 T 14-10-2018 IPR000160 GGDEF domain Tlie_0779 9714a11131216a0872b6c63d1ec5f93b 142 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 13 134 2.2E-37 T 14-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 Tlie_0779 9714a11131216a0872b6c63d1ec5f93b 142 Gene3D G3DSA:3.40.140.10 3 137 1.3E-43 T 14-10-2018 Tlie_0779 9714a11131216a0872b6c63d1ec5f93b 142 SUPERFAMILY SSF53927 9 134 1.07E-38 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tlie_0779 9714a11131216a0872b6c63d1ec5f93b 142 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 12 105 3.9E-14 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Tlie_0779 9714a11131216a0872b6c63d1ec5f93b 142 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 101 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 Gene3D G3DSA:3.40.50.261 393 555 5.8E-49 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 SUPERFAMILY SSF51735 261 398 2.79E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 416 552 5.5E-45 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 SMART SM00881 268 362 1.7E-27 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 Pfam PF13549 ATP-grasp domain 740 946 9.5E-46 T 14-10-2018 Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 Gene3D G3DSA:3.30.1490.20 763 833 3.2E-53 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 Pfam PF00551 Formyl transferase 14 192 2.0E-12 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 SUPERFAMILY SSF52210 393 552 3.66E-37 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 SUPERFAMILY SSF52210 558 709 2.09E-30 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 Gene3D G3DSA:3.40.50.720 263 391 4.1E-36 T 14-10-2018 Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 SUPERFAMILY SSF56059 749 948 1.88E-27 T 14-10-2018 Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 Gene3D G3DSA:3.30.470.20 750 946 3.2E-53 T 14-10-2018 Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 SUPERFAMILY SSF53328 13 205 5.23E-20 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 Pfam PF13380 CoA binding domain 272 396 3.6E-17 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 Gene3D G3DSA:3.40.50.261 556 716 3.5E-41 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tlie_0183 a5b8c8fd408b2987de33f9f4038a31aa 951 Gene3D G3DSA:3.40.50.170 7 241 9.4E-28 T 14-10-2018 Tlie_1345 0d634a4426da428b0d1dfd875d82c6c1 356 Pfam PF01861 Protein of unknown function DUF43 115 355 4.6E-94 T 14-10-2018 IPR002723 N(4)-bis(aminopropyl)spermidine synthase, C-terminal Tlie_1345 0d634a4426da428b0d1dfd875d82c6c1 356 Gene3D G3DSA:3.40.50.150 109 332 3.8E-74 T 14-10-2018 Tlie_1345 0d634a4426da428b0d1dfd875d82c6c1 356 Hamap MF_01947 N(4)-bis(aminopropyl)spermidine synthase [bpsA]. 21 356 49.64 T 14-10-2018 IPR014435 N(4)-bis(aminopropyl)spermidine synthase GO:0006596|GO:0016765 Tlie_1345 0d634a4426da428b0d1dfd875d82c6c1 356 SUPERFAMILY SSF53335 171 235 1.45E-11 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_1345 0d634a4426da428b0d1dfd875d82c6c1 356 Gene3D G3DSA:1.10.10.10 7 89 3.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1345 0d634a4426da428b0d1dfd875d82c6c1 356 PIRSF PIRSF005895 2 356 2.4E-128 T 14-10-2018 IPR014435 N(4)-bis(aminopropyl)spermidine synthase GO:0006596|GO:0016765 Tlie_0352 3ebab0500c079a58f98b4d7da0a91504 561 Gene3D G3DSA:3.40.190.10 329 561 1.2E-47 T 14-10-2018 Tlie_0352 3ebab0500c079a58f98b4d7da0a91504 561 SUPERFAMILY SSF53850 362 560 7.42E-44 T 14-10-2018 Tlie_0352 3ebab0500c079a58f98b4d7da0a91504 561 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 406 560 3.8E-27 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Tlie_0352 3ebab0500c079a58f98b4d7da0a91504 561 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 42 264 5.5E-34 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Tlie_0352 3ebab0500c079a58f98b4d7da0a91504 561 SUPERFAMILY SSF53850 41 345 3.32E-65 T 14-10-2018 Tlie_0352 3ebab0500c079a58f98b4d7da0a91504 561 Gene3D G3DSA:3.10.105.10 97 323 2.3E-51 T 14-10-2018 Tlie_0352 3ebab0500c079a58f98b4d7da0a91504 561 PIRSF PIRSF002741 352 561 2.3E-33 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Tlie_0352 3ebab0500c079a58f98b4d7da0a91504 561 PIRSF PIRSF002741 37 353 2.7E-54 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Tlie_1877 bc8ffea7dc448169da74f16d5a9148a2 237 Gene3D G3DSA:3.40.50.150 7 231 2.1E-56 T 14-10-2018 Tlie_1877 bc8ffea7dc448169da74f16d5a9148a2 237 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 205 9.5E-35 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Tlie_1877 bc8ffea7dc448169da74f16d5a9148a2 237 SUPERFAMILY SSF53335 23 227 9.93E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_1877 bc8ffea7dc448169da74f16d5a9148a2 237 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 15 209 20.69 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Tlie_1877 bc8ffea7dc448169da74f16d5a9148a2 237 Pfam PF02527 rRNA small subunit methyltransferase G 24 198 9.0E-38 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Tlie_0094 230a539165f2f7053d545860be7167c4 392 SMART SM00382 194 336 2.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0094 230a539165f2f7053d545860be7167c4 392 SMART SM00962 195 386 1.0E-29 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tlie_0094 230a539165f2f7053d545860be7167c4 392 Pfam PF00448 SRP54-type protein, GTPase domain 197 382 4.2E-34 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tlie_0094 230a539165f2f7053d545860be7167c4 392 Gene3D G3DSA:3.40.50.300 195 374 9.5E-49 T 14-10-2018 Tlie_0094 230a539165f2f7053d545860be7167c4 392 SUPERFAMILY SSF52540 195 385 3.44E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1062 dd411a67a2579eb8efee948b36a7e11d 250 SUPERFAMILY SSF64438 61 237 2.56E-33 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Tlie_1062 dd411a67a2579eb8efee948b36a7e11d 250 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 49 235 1.1E-31 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Tlie_1062 dd411a67a2579eb8efee948b36a7e11d 250 Gene3D G3DSA:3.60.140.10 45 245 9.3E-38 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Tlie_0695 d0786833e1ca341daeba16cf0965af4f 384 Gene3D G3DSA:3.40.50.2300 29 343 7.7E-92 T 14-10-2018 Tlie_0695 d0786833e1ca341daeba16cf0965af4f 384 Gene3D G3DSA:3.40.50.2300 151 281 7.7E-92 T 14-10-2018 Tlie_0695 d0786833e1ca341daeba16cf0965af4f 384 SUPERFAMILY SSF53822 28 378 2.19E-83 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Tlie_0695 d0786833e1ca341daeba16cf0965af4f 384 Pfam PF13458 Periplasmic binding protein 28 343 2.6E-61 T 14-10-2018 IPR028081 Leucine-binding protein domain Tlie_0695 d0786833e1ca341daeba16cf0965af4f 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 50 66 1.8E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tlie_0695 d0786833e1ca341daeba16cf0965af4f 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 285 298 1.8E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tlie_0695 d0786833e1ca341daeba16cf0965af4f 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 28 44 1.8E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tlie_0695 d0786833e1ca341daeba16cf0965af4f 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 69 87 1.8E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tlie_0278 c7a8169480cafdc259eed6f18db33048 257 Pfam PF03746 LamB/YcsF family 4 242 3.2E-105 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Tlie_0278 c7a8169480cafdc259eed6f18db33048 257 SUPERFAMILY SSF88713 2 253 7.23E-102 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Tlie_0278 c7a8169480cafdc259eed6f18db33048 257 Gene3D G3DSA:3.20.20.370 2 256 1.3E-109 T 14-10-2018 Tlie_0278 c7a8169480cafdc259eed6f18db33048 257 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 46.928 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Tlie_1616 9965ba24d7c6ca5c3d73967189275c63 179 Gene3D G3DSA:3.40.50.700 2 178 1.7E-40 T 14-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Tlie_1616 9965ba24d7c6ca5c3d73967189275c63 179 SUPERFAMILY SSF56770 3 177 5.36E-38 T 14-10-2018 Tlie_1616 9965ba24d7c6ca5c3d73967189275c63 179 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 14 161 3.7E-30 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1548 f26af2f788ed97711633287e0f54846a 329 SUPERFAMILY SSF81345 5 327 5.23E-66 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tlie_1548 f26af2f788ed97711633287e0f54846a 329 Pfam PF01032 FecCD transport family 19 327 1.4E-76 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Tlie_1548 f26af2f788ed97711633287e0f54846a 329 Gene3D G3DSA:1.10.3470.10 6 329 5.4E-84 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tlie_0365 66224a37821b166d131f3f36c7224df1 377 Pfam PF00515 Tetratricopeptide repeat 301 333 6.4E-7 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 SUPERFAMILY SSF48452 219 355 7.21E-37 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 SMART SM00028 334 367 440.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 SMART SM00028 198 231 0.041 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 SMART SM00028 62 95 0.0053 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 SMART SM00028 232 265 0.012 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 SMART SM00028 300 333 1.0E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 SMART SM00028 96 129 1.2E-7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 SMART SM00028 164 197 9.8E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 SMART SM00028 130 163 1.2E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 SMART SM00028 266 299 0.078 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 SMART SM00028 28 61 0.03 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 Pfam PF13181 Tetratricopeptide repeat 267 297 0.07 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 Pfam PF13181 Tetratricopeptide repeat 232 264 0.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 Pfam PF13414 TPR repeat 41 76 1.6E-8 T 14-10-2018 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 Pfam PF13414 TPR repeat 171 212 1.0E-9 T 14-10-2018 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 SUPERFAMILY SSF48452 27 200 1.14E-42 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 Gene3D G3DSA:1.25.40.10 25 100 1.3E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 Pfam PF13432 Tetratricopeptide repeat 102 164 5.5E-11 T 14-10-2018 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 Gene3D G3DSA:1.25.40.10 285 372 4.7E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 Gene3D G3DSA:1.25.40.10 191 284 1.5E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_0365 66224a37821b166d131f3f36c7224df1 377 Gene3D G3DSA:1.25.40.10 101 190 5.2E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_0428 80120e03b71edaaccb24a31a380540f9 215 Pfam PF01725 Ham1 family 7 190 4.9E-47 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Tlie_0428 80120e03b71edaaccb24a31a380540f9 215 Hamap MF_01405 dITP/XTP pyrophosphatase. 5 195 41.788 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Tlie_0428 80120e03b71edaaccb24a31a380540f9 215 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 6 193 2.4E-46 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Tlie_0428 80120e03b71edaaccb24a31a380540f9 215 SUPERFAMILY SSF52972 4 193 6.8E-56 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Tlie_0428 80120e03b71edaaccb24a31a380540f9 215 Gene3D G3DSA:3.90.950.10 3 198 4.8E-59 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Tlie_0262 cccc0c6d44c05730a5cffa4e068ee1e8 135 Pfam PF09484 CRISPR-associated protein TM1802 (cas_TM1802) 4 112 3.0E-14 T 14-10-2018 IPR013389 CRISPR-associated protein Cas8b Tlie_1912 d91a152d1be3f06cb3199895afd155fc 373 SMART SM00729 21 228 0.002 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tlie_1912 d91a152d1be3f06cb3199895afd155fc 373 SUPERFAMILY SSF102114 21 333 1.83E-49 T 14-10-2018 Tlie_1912 d91a152d1be3f06cb3199895afd155fc 373 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 27 38 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_1912 d91a152d1be3f06cb3199895afd155fc 373 Pfam PF04055 Radical SAM superfamily 26 187 1.2E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_1912 d91a152d1be3f06cb3199895afd155fc 373 Gene3D G3DSA:3.20.20.70 16 308 7.1E-41 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1912 d91a152d1be3f06cb3199895afd155fc 373 Pfam PF13186 Iron-sulfur cluster-binding domain 250 327 3.1E-12 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tlie_1912 d91a152d1be3f06cb3199895afd155fc 373 Pfam PF13353 4Fe-4S single cluster domain 28 110 3.1E-6 T 14-10-2018 Tlie_1912 d91a152d1be3f06cb3199895afd155fc 373 TIGRFAM TIGR04317 W_rSAM_matur: tungsten cofactor oxidoreducase radical SAM maturase 19 363 2.1E-151 T 14-10-2018 IPR027604 Tungsten cofactor oxidoreducase radical SAM maturase Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 224 268 6.4E-10 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 Pfam PF00384 Molybdopterin oxidoreductase 278 399 1.4E-9 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 Pfam PF00384 Molybdopterin oxidoreductase 488 564 2.0E-8 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 Gene3D G3DSA:2.20.25.90 218 273 2.9E-11 T 14-10-2018 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 Gene3D G3DSA:3.40.228.10 340 404 1.4E-6 T 14-10-2018 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 Gene3D G3DSA:3.40.50.740 471 568 1.6E-13 T 14-10-2018 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 SUPERFAMILY SSF54292 5 77 6.06E-18 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 SUPERFAMILY SSF54862 80 210 1.05E-32 T 14-10-2018 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 Gene3D G3DSA:3.30.70.20 130 210 1.2E-21 T 14-10-2018 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 2.5E-18 T 14-10-2018 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 SMART SM00929 86 126 2.0E-15 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 SMART SM00926 221 274 1.6E-7 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 Gene3D G3DSA:3.10.20.740 4 126 3.6E-38 T 14-10-2018 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 Gene3D G3DSA:3.40.50.740 282 339 1.4E-6 T 14-10-2018 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 87 125 2.0E-14 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 Pfam PF13187 4Fe-4S dicluster domain 148 206 2.4E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 SUPERFAMILY SSF53706 223 565 1.27E-54 T 14-10-2018 Tlie_1464 2b2413de25ef3b47bccf8375c32779ec 568 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 192 203 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_0116 46ed7f5e94078ffc0571acb81a657096 175 Gene3D G3DSA:3.30.1330.200 15 174 7.5E-50 T 14-10-2018 IPR038592 CheD-like superfamily Tlie_0116 46ed7f5e94078ffc0571acb81a657096 175 SUPERFAMILY SSF64438 18 170 1.1E-42 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Tlie_0116 46ed7f5e94078ffc0571acb81a657096 175 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 14 171 25.305 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Tlie_0116 46ed7f5e94078ffc0571acb81a657096 175 Pfam PF03975 CheD chemotactic sensory transduction 61 167 9.5E-34 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Tlie_0029 8da2f81358542bdc2c1ddd281524cb78 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 414 1.1E-109 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tlie_0029 8da2f81358542bdc2c1ddd281524cb78 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 420 3.6E-121 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_0029 8da2f81358542bdc2c1ddd281524cb78 428 PIRSF PIRSF006066 1 426 3.2E-147 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_1774 3a32d9e3e984945a366de6e3c2e3c6a2 357 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 7 347 2.2E-122 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Tlie_1774 3a32d9e3e984945a366de6e3c2e3c6a2 357 Gene3D G3DSA:1.20.1530.20 3 349 1.3E-25 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Tlie_1774 3a32d9e3e984945a366de6e3c2e3c6a2 357 Pfam PF01758 Sodium Bile acid symporter family 52 260 1.2E-55 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Tlie_1774 3a32d9e3e984945a366de6e3c2e3c6a2 357 PIRSF PIRSF005508 1 357 2.9E-126 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Tlie_0831 6b76ca09339e401c9ca2ae108cb69cbb 240 Pfam PF00977 Histidine biosynthesis protein 3 228 2.3E-64 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Tlie_0831 6b76ca09339e401c9ca2ae108cb69cbb 240 Gene3D G3DSA:3.20.20.70 3 240 1.4E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0831 6b76ca09339e401c9ca2ae108cb69cbb 240 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 236 30.601 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Tlie_0831 6b76ca09339e401c9ca2ae108cb69cbb 240 SUPERFAMILY SSF51366 1 235 7.4E-60 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tlie_1777 2d1175be5063b8c10f0d8dcf786f41bd 201 SUPERFAMILY SSF46785 5 105 9.04E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1777 2d1175be5063b8c10f0d8dcf786f41bd 201 Gene3D G3DSA:3.40.30.10 112 187 2.2E-20 T 14-10-2018 Tlie_1777 2d1175be5063b8c10f0d8dcf786f41bd 201 Pfam PF12840 Helix-turn-helix domain 9 67 3.0E-14 T 14-10-2018 Tlie_1777 2d1175be5063b8c10f0d8dcf786f41bd 201 SUPERFAMILY SSF52833 114 188 7.61E-11 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tlie_1777 2d1175be5063b8c10f0d8dcf786f41bd 201 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 1.9E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tlie_1777 2d1175be5063b8c10f0d8dcf786f41bd 201 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 1.9E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tlie_1777 2d1175be5063b8c10f0d8dcf786f41bd 201 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 1.9E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tlie_1777 2d1175be5063b8c10f0d8dcf786f41bd 201 Pfam PF13192 Thioredoxin domain 114 187 7.0E-17 T 14-10-2018 IPR012336 Thioredoxin-like fold Tlie_1777 2d1175be5063b8c10f0d8dcf786f41bd 201 SMART SM00418 10 91 5.0E-22 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tlie_1777 2d1175be5063b8c10f0d8dcf786f41bd 201 Gene3D G3DSA:1.10.10.10 2 100 1.7E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1275 8790e8ba0607b5cc7631fa9817f64dad 257 Gene3D G3DSA:3.10.330.20 1 63 1.5E-17 T 14-10-2018 Tlie_1275 8790e8ba0607b5cc7631fa9817f64dad 257 SUPERFAMILY SSF53335 1 251 1.4E-68 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_1275 8790e8ba0607b5cc7631fa9817f64dad 257 Pfam PF08704 tRNA methyltransferase complex GCD14 subunit 58 237 1.4E-36 T 14-10-2018 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 MetaCyc: PWY-6829 Tlie_1275 8790e8ba0607b5cc7631fa9817f64dad 257 Gene3D G3DSA:3.40.50.150 66 256 1.0E-67 T 14-10-2018 Tlie_1275 8790e8ba0607b5cc7631fa9817f64dad 257 PIRSF PIRSF017269 1 256 9.0E-83 T 14-10-2018 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 MetaCyc: PWY-6829 Tlie_0307 51f2f3ae51ec3a1448bef6edfbaa1e5d 300 Pfam PF04556 DpnII restriction endonuclease 16 295 4.8E-98 T 14-10-2018 IPR007637 Restriction endonuclease, type II, DpmII-like GO:0003677|GO:0009036|GO:0009307 Tlie_0307 51f2f3ae51ec3a1448bef6edfbaa1e5d 300 PIRSF PIRSF016080 10 298 2.0E-93 T 14-10-2018 IPR021191 Restriction endonuclease, type II, DpmII GO:0003677|GO:0009036|GO:0009307 Tlie_1701 703926f6be768ebf4c0bf17adecd1bec 358 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 180 197 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1701 703926f6be768ebf4c0bf17adecd1bec 358 Hamap MF_00542 Probable butyrate kinase [buk]. 1 358 160.99 T 14-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Tlie_1701 703926f6be768ebf4c0bf17adecd1bec 358 SUPERFAMILY SSF53067 3 174 2.78E-63 T 14-10-2018 Tlie_1701 703926f6be768ebf4c0bf17adecd1bec 358 PIRSF PIRSF036458 1 357 2.9E-160 T 14-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Tlie_1701 703926f6be768ebf4c0bf17adecd1bec 358 Gene3D G3DSA:3.30.420.40 138 333 1.5E-155 T 14-10-2018 Tlie_1701 703926f6be768ebf4c0bf17adecd1bec 358 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1701 703926f6be768ebf4c0bf17adecd1bec 358 PRINTS PR00471 Acetate kinase family signature 180 201 4.2E-15 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1701 703926f6be768ebf4c0bf17adecd1bec 358 PRINTS PR00471 Acetate kinase family signature 275 288 4.2E-15 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1701 703926f6be768ebf4c0bf17adecd1bec 358 PRINTS PR00471 Acetate kinase family signature 5 16 4.2E-15 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1701 703926f6be768ebf4c0bf17adecd1bec 358 PRINTS PR00471 Acetate kinase family signature 298 314 4.2E-15 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1701 703926f6be768ebf4c0bf17adecd1bec 358 Gene3D G3DSA:3.30.420.40 4 356 1.5E-155 T 14-10-2018 Tlie_1701 703926f6be768ebf4c0bf17adecd1bec 358 SUPERFAMILY SSF53067 124 349 2.65E-55 T 14-10-2018 Tlie_1701 703926f6be768ebf4c0bf17adecd1bec 358 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 4 354 2.1E-157 T 14-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Tlie_1701 703926f6be768ebf4c0bf17adecd1bec 358 Pfam PF00871 Acetokinase family 5 351 1.3E-68 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_0021 ae7afe21332f9030aacb1473f42045b7 240 SUPERFAMILY SSF56507 71 158 1.03E-5 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tlie_1570 42bc3298ea61970c8c95a2b4dff2aabf 793 Pfam PF00271 Helicase conserved C-terminal domain 328 430 2.0E-14 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_1570 42bc3298ea61970c8c95a2b4dff2aabf 793 SUPERFAMILY SSF52540 68 285 8.1E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1570 42bc3298ea61970c8c95a2b4dff2aabf 793 SUPERFAMILY SSF52540 111 488 1.58E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1570 42bc3298ea61970c8c95a2b4dff2aabf 793 SMART SM00487 93 298 1.7E-33 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tlie_1570 42bc3298ea61970c8c95a2b4dff2aabf 793 Pfam PF09369 Domain of unknown function (DUF1998) 690 769 6.8E-16 T 14-10-2018 IPR018973 DEAD/DEAH-box helicase, putative Tlie_1570 42bc3298ea61970c8c95a2b4dff2aabf 793 SMART SM00490 348 432 4.6E-15 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_1570 42bc3298ea61970c8c95a2b4dff2aabf 793 Gene3D G3DSA:3.40.50.300 307 531 6.2E-24 T 14-10-2018 Tlie_1570 42bc3298ea61970c8c95a2b4dff2aabf 793 Pfam PF00270 DEAD/DEAH box helicase 99 271 2.4E-27 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tlie_1570 42bc3298ea61970c8c95a2b4dff2aabf 793 Gene3D G3DSA:3.40.50.300 76 286 3.7E-46 T 14-10-2018 Tlie_1182 7332d8230d10814fae35035906fc17b3 265 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 29 261 4.9E-96 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Tlie_1182 7332d8230d10814fae35035906fc17b3 265 PIRSF PIRSF005650 25 265 2.8E-93 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Tlie_1182 7332d8230d10814fae35035906fc17b3 265 Gene3D G3DSA:3.40.1160.10 20 265 5.3E-83 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tlie_1182 7332d8230d10814fae35035906fc17b3 265 SUPERFAMILY SSF53633 27 260 2.88E-71 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tlie_1182 7332d8230d10814fae35035906fc17b3 265 Hamap MF_01220_B Uridylate kinase [pyrH]. 27 261 42.923 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Tlie_1182 7332d8230d10814fae35035906fc17b3 265 Pfam PF00696 Amino acid kinase family 30 239 6.2E-35 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 237 264 4.0E-49 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 139 159 4.0E-49 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 171 185 4.0E-49 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 203 217 4.0E-49 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 400 419 4.0E-49 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 Pfam PF00308 Bacterial dnaA protein 106 323 1.3E-100 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 Gene3D G3DSA:1.10.8.60 272 340 3.4E-26 T 14-10-2018 Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 Gene3D G3DSA:3.40.50.300 90 270 1.3E-54 T 14-10-2018 Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 SUPERFAMILY SSF52540 106 317 3.13E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 SUPERFAMILY SSF48295 337 440 8.37E-33 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 351 419 6.5E-28 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 ProSitePatterns PS01008 DnaA protein signature. 400 419 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 440 1.5E-166 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 Gene3D G3DSA:1.10.1750.10 341 440 4.8E-33 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 SMART SM00760 350 419 1.9E-34 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 437 31.673 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 SMART SM00382 138 266 1.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 Gene3D G3DSA:3.30.300.180 2 80 9.2E-11 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily Tlie_0001 c83b44fc14a552a0de464be6bda46e52 440 Pfam PF11638 DnaA N-terminal domain 7 68 1.6E-6 T 14-10-2018 IPR024633 DnaA N-terminal domain Tlie_0421 1899a301b9215817af45697214c36c48 348 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 7 150 1.2E-10 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Tlie_0421 1899a301b9215817af45697214c36c48 348 PIRSF PIRSF036497 1 345 1.9E-71 T 14-10-2018 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Tlie_0421 1899a301b9215817af45697214c36c48 348 SUPERFAMILY SSF55347 159 322 4.58E-32 T 14-10-2018 Tlie_0421 1899a301b9215817af45697214c36c48 348 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 204 226 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Tlie_0421 1899a301b9215817af45697214c36c48 348 SUPERFAMILY SSF51735 1 172 4.96E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0421 1899a301b9215817af45697214c36c48 348 Pfam PF00742 Homoserine dehydrogenase 159 336 4.3E-41 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Tlie_0421 1899a301b9215817af45697214c36c48 348 Gene3D G3DSA:3.40.50.720 3 337 6.2E-79 T 14-10-2018 Tlie_0421 1899a301b9215817af45697214c36c48 348 Gene3D G3DSA:3.30.360.10 170 320 6.2E-79 T 14-10-2018 Tlie_1468 c09573c6fd4893644a1b5f7a284b9877 55 TIGRFAM TIGR01206 lysW: lysine biosynthesis protein LysW 1 55 3.1E-17 T 14-10-2018 IPR005906 Lysine biosynthesis protein LysW Tlie_1468 c09573c6fd4893644a1b5f7a284b9877 55 Gene3D G3DSA:2.20.28.160 3 55 9.9E-20 T 14-10-2018 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 Pfam PF00162 Phosphoglycerate kinase 10 385 7.2E-145 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 SUPERFAMILY SSF53748 3 393 6.6E-144 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 6.0E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 PRINTS PR00477 Phosphoglycerate kinase family signature 312 337 6.0E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 PRINTS PR00477 Phosphoglycerate kinase family signature 371 388 6.0E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 6.0E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 PRINTS PR00477 Phosphoglycerate kinase family signature 348 359 6.0E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 6.0E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 6.0E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 6.0E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 6.0E-78 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 Gene3D G3DSA:3.40.50.1260 169 385 3.4E-148 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 PIRSF PIRSF000724 1 395 2.1E-139 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 Gene3D G3DSA:3.40.50.1260 11 392 3.4E-148 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0996 52d2e0c9e600cc689be50b162b265a07 395 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 395 38.464 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_1797 f6edc1b4378e0960771707e17840a68d 623 Gene3D G3DSA:3.60.9.10 1 211 5.1E-76 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_1797 f6edc1b4378e0960771707e17840a68d 623 Gene3D G3DSA:1.10.569.10 242 432 1.5E-122 T 14-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Tlie_1797 f6edc1b4378e0960771707e17840a68d 623 SMART SM00790 4 207 3.7E-99 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1797 f6edc1b4378e0960771707e17840a68d 623 SUPERFAMILY SSF56228 2 208 7.46E-69 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_1797 f6edc1b4378e0960771707e17840a68d 623 Gene3D G3DSA:1.10.599.10 241 613 1.5E-122 T 14-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Tlie_1797 f6edc1b4378e0960771707e17840a68d 623 SUPERFAMILY SSF48310 211 616 3.27E-108 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1797 f6edc1b4378e0960771707e17840a68d 623 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 220 613 1.3E-117 T 14-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1797 f6edc1b4378e0960771707e17840a68d 623 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 8 206 1.5E-73 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1631 d2aaff0851bb4f44110bac896a578c77 239 Gene3D G3DSA:3.20.20.370 29 231 1.0E-70 T 14-10-2018 Tlie_1631 d2aaff0851bb4f44110bac896a578c77 239 Pfam PF01522 Polysaccharide deacetylase 39 160 8.4E-35 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Tlie_1631 d2aaff0851bb4f44110bac896a578c77 239 SUPERFAMILY SSF88713 28 229 1.89E-63 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Tlie_1717 296875d2e521617583bde72901da71d0 622 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 12 612 3.0E-195 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ Tlie_1717 296875d2e521617583bde72901da71d0 622 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 110 542 2.2E-88 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tlie_1652 855b54e11201968667b87cc1eda8e2ad 601 Gene3D G3DSA:1.50.10.20 287 526 5.2E-8 T 14-10-2018 Tlie_1652 855b54e11201968667b87cc1eda8e2ad 601 SUPERFAMILY SSF48208 220 507 1.19E-18 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Tlie_0595 d7c5c0f1f01d1f751e5fa607f5fef260 158 Pfam PF01750 Hydrogenase maturation protease 36 139 2.8E-11 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tlie_0595 d7c5c0f1f01d1f751e5fa607f5fef260 158 SUPERFAMILY SSF53163 4 141 7.85E-29 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily Tlie_0595 d7c5c0f1f01d1f751e5fa607f5fef260 158 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 6 141 3.9E-29 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tlie_0595 d7c5c0f1f01d1f751e5fa607f5fef260 158 PRINTS PR00446 Hydrogen uptake protein signature 58 68 2.6E-7 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tlie_0595 d7c5c0f1f01d1f751e5fa607f5fef260 158 PRINTS PR00446 Hydrogen uptake protein signature 5 17 2.6E-7 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tlie_0595 d7c5c0f1f01d1f751e5fa607f5fef260 158 PRINTS PR00446 Hydrogen uptake protein signature 17 28 2.6E-7 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tlie_0595 d7c5c0f1f01d1f751e5fa607f5fef260 158 PRINTS PR00446 Hydrogen uptake protein signature 69 85 2.6E-7 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tlie_0595 d7c5c0f1f01d1f751e5fa607f5fef260 158 Gene3D G3DSA:3.40.50.1450 2 148 3.2E-37 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily Tlie_1251 57ca5540da36143e714a1b3d3d994cca 488 Gene3D G3DSA:1.10.10.410 424 488 4.9E-16 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Tlie_1251 57ca5540da36143e714a1b3d3d994cca 488 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 152 166 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 Tlie_1251 57ca5540da36143e714a1b3d3d994cca 488 Gene3D G3DSA:1.10.150.380 304 408 1.7E-23 T 14-10-2018 Tlie_1251 57ca5540da36143e714a1b3d3d994cca 488 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 4 486 8.2E-171 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Tlie_1251 57ca5540da36143e714a1b3d3d994cca 488 Pfam PF02637 GatB domain 335 486 1.2E-29 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Tlie_1251 57ca5540da36143e714a1b3d3d994cca 488 SUPERFAMILY SSF89095 304 406 1.44E-23 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Tlie_1251 57ca5540da36143e714a1b3d3d994cca 488 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 4 487 35.953 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Tlie_1251 57ca5540da36143e714a1b3d3d994cca 488 SMART SM00845 335 486 1.2E-31 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Tlie_1251 57ca5540da36143e714a1b3d3d994cca 488 SUPERFAMILY SSF55931 8 303 4.32E-115 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Tlie_1251 57ca5540da36143e714a1b3d3d994cca 488 Pfam PF02934 GatB/GatE catalytic domain 7 296 3.6E-113 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 Tlie_1843 98813f6a46fc04764cefd510e60df593 342 Gene3D G3DSA:1.20.970.10 4 67 4.9E-23 T 14-10-2018 Tlie_1843 98813f6a46fc04764cefd510e60df593 342 Gene3D G3DSA:3.40.1030.10 69 341 8.3E-102 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_1843 98813f6a46fc04764cefd510e60df593 342 SUPERFAMILY SSF47648 2 65 2.88E-18 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_1843 98813f6a46fc04764cefd510e60df593 342 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 329 2.8E-119 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Tlie_1843 98813f6a46fc04764cefd510e60df593 342 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 332 36.114 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Tlie_1843 98813f6a46fc04764cefd510e60df593 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 63 4.3E-19 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_1843 98813f6a46fc04764cefd510e60df593 342 SUPERFAMILY SSF52418 72 335 2.09E-90 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_1843 98813f6a46fc04764cefd510e60df593 342 Pfam PF00591 Glycosyl transferase family, a/b domain 73 323 6.9E-89 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_1495 a0c5a7403bae8c85ffabdf3e13d9ad6f 137 Pfam PF00137 ATP synthase subunit C 75 133 1.2E-15 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Tlie_1495 a0c5a7403bae8c85ffabdf3e13d9ad6f 137 PRINTS PR00124 ATP synthase C subunit signature 109 134 2.4E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tlie_1495 a0c5a7403bae8c85ffabdf3e13d9ad6f 137 PRINTS PR00124 ATP synthase C subunit signature 71 90 2.4E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tlie_1495 a0c5a7403bae8c85ffabdf3e13d9ad6f 137 Gene3D G3DSA:1.20.120.610 37 136 1.0E-10 T 14-10-2018 Tlie_1495 a0c5a7403bae8c85ffabdf3e13d9ad6f 137 SUPERFAMILY SSF81333 69 135 1.11E-12 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 PIRSF PIRSF000853 4 881 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 Pfam PF00391 PEP-utilising enzyme, mobile domain 421 502 2.8E-28 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 Gene3D G3DSA:3.20.20.60 531 879 1.5E-150 T 14-10-2018 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 Gene3D G3DSA:1.20.80.30 112 199 5.5E-97 T 14-10-2018 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 Gene3D G3DSA:3.30.470.20 245 342 4.1E-43 T 14-10-2018 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 Gene3D G3DSA:1.10.189.10 346 528 1.2E-76 T 14-10-2018 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 303 357 9.6E-12 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 20 289 2.1E-45 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 518 877 3.9E-94 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 Gene3D G3DSA:3.50.30.10 384 508 1.2E-76 T 14-10-2018 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 SUPERFAMILY SSF51621 511 879 2.64E-120 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 449 460 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 768 786 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 Gene3D G3DSA:3.30.1490.20 13 244 5.5E-97 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 5 879 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 SUPERFAMILY SSF56059 3 379 1.09E-140 T 14-10-2018 Tlie_0785 2d072dbe0c7d110b97519bd6a34530da 883 SUPERFAMILY SSF52009 387 511 4.71E-39 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Tlie_1072 b5bd4c066a5ae0b0cd67100378a99088 244 SMART SM00478 60 217 9.3E-34 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Tlie_1072 b5bd4c066a5ae0b0cd67100378a99088 244 SMART SM00525 218 238 0.0047 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Tlie_1072 b5bd4c066a5ae0b0cd67100378a99088 244 PIRSF PIRSF001435 20 243 8.1E-49 T 14-10-2018 Tlie_1072 b5bd4c066a5ae0b0cd67100378a99088 244 SUPERFAMILY SSF48150 22 239 4.87E-53 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Tlie_1072 b5bd4c066a5ae0b0cd67100378a99088 244 Gene3D G3DSA:1.10.340.30 44 163 7.0E-62 T 14-10-2018 Tlie_1072 b5bd4c066a5ae0b0cd67100378a99088 244 Gene3D G3DSA:1.10.1670.10 42 235 7.0E-62 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Tlie_1072 b5bd4c066a5ae0b0cd67100378a99088 244 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 56 200 9.8E-18 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Tlie_1072 b5bd4c066a5ae0b0cd67100378a99088 244 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 219 235 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Tlie_0419 65162e3edc0f4072cc5473179147c841 245 PIRSF PIRSF001357 24 245 2.5E-59 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Tlie_0419 65162e3edc0f4072cc5473179147c841 245 SMART SM01133 30 242 3.7E-59 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Tlie_0419 65162e3edc0f4072cc5473179147c841 245 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 29 244 26.14 T 14-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 Tlie_0419 65162e3edc0f4072cc5473179147c841 245 Gene3D G3DSA:3.20.20.70 3 244 4.8E-69 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0419 65162e3edc0f4072cc5473179147c841 245 Pfam PF01791 DeoC/LacD family aldolase 35 219 1.3E-9 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Tlie_0419 65162e3edc0f4072cc5473179147c841 245 SUPERFAMILY SSF51569 28 241 2.3E-59 T 14-10-2018 Tlie_0419 65162e3edc0f4072cc5473179147c841 245 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 34 239 1.5E-53 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Tlie_0857 8134f500f77559539dbf7e479f756081 155 SUPERFAMILY SSF54523 13 112 3.65E-17 T 14-10-2018 Tlie_0857 8134f500f77559539dbf7e479f756081 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 48 66 9.7E-9 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tlie_0857 8134f500f77559539dbf7e479f756081 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 12 37 9.7E-9 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tlie_0857 8134f500f77559539dbf7e479f756081 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 5.5E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0857 8134f500f77559539dbf7e479f756081 155 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 33 2.9E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0857 8134f500f77559539dbf7e479f756081 155 Gene3D G3DSA:3.30.700.10 13 150 5.3E-18 T 14-10-2018 Tlie_0857 8134f500f77559539dbf7e479f756081 155 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0922 f1e41654c90850338808168ef9855385 367 Pfam PF13184 NusA-like KH domain 234 300 1.2E-25 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Tlie_0922 f1e41654c90850338808168ef9855385 367 Gene3D G3DSA:2.40.50.140 139 202 6.5E-19 T 14-10-2018 Tlie_0922 f1e41654c90850338808168ef9855385 367 SMART SM00316 137 204 3.4E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tlie_0922 f1e41654c90850338808168ef9855385 367 Gene3D G3DSA:3.30.1480.10 4 132 3.2E-38 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Tlie_0922 f1e41654c90850338808168ef9855385 367 SUPERFAMILY SSF69705 6 130 2.49E-35 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Tlie_0922 f1e41654c90850338808168ef9855385 367 Gene3D G3DSA:3.30.300.20 203 281 7.9E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Tlie_0922 f1e41654c90850338808168ef9855385 367 Pfam PF08529 NusA N-terminal domain 8 128 1.7E-34 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Tlie_0922 f1e41654c90850338808168ef9855385 367 SUPERFAMILY SSF54814 204 281 7.19E-28 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Tlie_0922 f1e41654c90850338808168ef9855385 367 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 8 347 1.3E-121 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Tlie_0922 f1e41654c90850338808168ef9855385 367 Gene3D G3DSA:3.30.300.20 283 363 1.1E-27 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Tlie_0922 f1e41654c90850338808168ef9855385 367 SUPERFAMILY SSF54814 283 347 7.19E-16 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Tlie_0922 f1e41654c90850338808168ef9855385 367 SUPERFAMILY SSF50249 136 203 5.74E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0922 f1e41654c90850338808168ef9855385 367 SMART SM00322 234 305 2.7 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Tlie_0922 f1e41654c90850338808168ef9855385 367 SMART SM00322 306 363 0.0032 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Tlie_0922 f1e41654c90850338808168ef9855385 367 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 5 366 28.788 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Tlie_1151 5fd9509f78e4ca36fb84c5b344fbfebc 509 Gene3D G3DSA:3.40.50.1380 1 197 1.4E-77 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Tlie_1151 5fd9509f78e4ca36fb84c5b344fbfebc 509 SMART SM00798 134 444 5.1E-117 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tlie_1151 5fd9509f78e4ca36fb84c5b344fbfebc 509 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 509 36.636 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tlie_1151 5fd9509f78e4ca36fb84c5b344fbfebc 509 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 442 1.9E-95 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tlie_1151 5fd9509f78e4ca36fb84c5b344fbfebc 509 SUPERFAMILY SSF52335 3 193 8.24E-63 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Tlie_1151 5fd9509f78e4ca36fb84c5b344fbfebc 509 PIRSF PIRSF000414 1 509 7.8E-180 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tlie_1151 5fd9509f78e4ca36fb84c5b344fbfebc 509 Gene3D G3DSA:3.40.140.20 390 509 1.6E-42 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tlie_1151 5fd9509f78e4ca36fb84c5b344fbfebc 509 SUPERFAMILY SSF53927 211 509 3.41E-98 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tlie_1151 5fd9509f78e4ca36fb84c5b344fbfebc 509 Gene3D G3DSA:3.40.140.20 207 359 5.8E-54 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tlie_1151 5fd9509f78e4ca36fb84c5b344fbfebc 509 Pfam PF02142 MGS-like domain 15 129 1.1E-22 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Tlie_1151 5fd9509f78e4ca36fb84c5b344fbfebc 509 SMART SM00851 15 129 6.3E-43 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Tlie_0053 1df93898f19da46f9caf781dc148b662 402 Gene3D G3DSA:3.40.50.300 152 401 3.1E-92 T 14-10-2018 Tlie_0053 1df93898f19da46f9caf781dc148b662 402 Gene3D G3DSA:3.30.450.90 46 151 1.3E-24 T 14-10-2018 Tlie_0053 1df93898f19da46f9caf781dc148b662 402 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 52 391 6.4E-128 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Tlie_0053 1df93898f19da46f9caf781dc148b662 402 Pfam PF00437 Type II/IV secretion system protein 61 311 3.3E-41 T 14-10-2018 IPR001482 Type II/IV secretion system protein Tlie_0053 1df93898f19da46f9caf781dc148b662 402 SMART SM00382 173 298 1.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0053 1df93898f19da46f9caf781dc148b662 402 SUPERFAMILY SSF52540 52 385 2.94E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1035 4294488cd5568a7ca5877dec5cf5daf9 243 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 4 240 50.426 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 Tlie_1035 4294488cd5568a7ca5877dec5cf5daf9 243 TIGRFAM TIGR00552 nadE: NAD+ synthetase 10 238 2.3E-75 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Tlie_1035 4294488cd5568a7ca5877dec5cf5daf9 243 Gene3D G3DSA:3.40.50.620 2 242 1.7E-76 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1035 4294488cd5568a7ca5877dec5cf5daf9 243 SUPERFAMILY SSF52402 4 240 1.06E-69 T 14-10-2018 Tlie_1035 4294488cd5568a7ca5877dec5cf5daf9 243 Pfam PF02540 NAD synthase 10 237 1.1E-68 T 14-10-2018 IPR022310 NAD/GMP synthase Tlie_0823 efdb1d370137f69e3db3a3d56a02ce6c 396 Pfam PF07687 Peptidase dimerisation domain 200 290 1.4E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Tlie_0823 efdb1d370137f69e3db3a3d56a02ce6c 396 Gene3D G3DSA:3.30.70.360 195 309 2.0E-119 T 14-10-2018 Tlie_0823 efdb1d370137f69e3db3a3d56a02ce6c 396 Gene3D G3DSA:3.40.630.10 25 381 2.0E-119 T 14-10-2018 Tlie_0823 efdb1d370137f69e3db3a3d56a02ce6c 396 PIRSF PIRSF005962 11 396 4.0E-111 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Tlie_0823 efdb1d370137f69e3db3a3d56a02ce6c 396 SUPERFAMILY SSF55031 198 310 3.93E-27 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tlie_0823 efdb1d370137f69e3db3a3d56a02ce6c 396 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 25 385 3.4E-98 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Tlie_0823 efdb1d370137f69e3db3a3d56a02ce6c 396 Pfam PF01546 Peptidase family M20/M25/M40 86 392 3.1E-31 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tlie_0823 efdb1d370137f69e3db3a3d56a02ce6c 396 SUPERFAMILY SSF53187 13 394 1.29E-72 T 14-10-2018 Tlie_1462 58953a6dd938a02ae1448fc8691ba4ea 219 SUPERFAMILY SSF46894 151 217 1.63E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tlie_1462 58953a6dd938a02ae1448fc8691ba4ea 219 SUPERFAMILY SSF52172 6 138 5.83E-31 T 14-10-2018 IPR011006 CheY-like superfamily Tlie_1462 58953a6dd938a02ae1448fc8691ba4ea 219 SMART SM00448 6 119 8.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_1462 58953a6dd938a02ae1448fc8691ba4ea 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 3.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_1462 58953a6dd938a02ae1448fc8691ba4ea 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 3.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_1462 58953a6dd938a02ae1448fc8691ba4ea 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 3.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_1462 58953a6dd938a02ae1448fc8691ba4ea 219 SMART SM00421 153 210 3.5E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_1462 58953a6dd938a02ae1448fc8691ba4ea 219 Gene3D G3DSA:3.40.50.12740 6 216 8.3E-63 T 14-10-2018 Tlie_1462 58953a6dd938a02ae1448fc8691ba4ea 219 Pfam PF00072 Response regulator receiver domain 8 120 8.9E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_1462 58953a6dd938a02ae1448fc8691ba4ea 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_1462 58953a6dd938a02ae1448fc8691ba4ea 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 210 7.9E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_0444 f2d34feb7a2b6bc5e6bcc811e76f46b1 60 Gene3D G3DSA:1.20.5.1030 1 58 6.5E-21 T 14-10-2018 IPR038379 SecE superfamily Tlie_0444 f2d34feb7a2b6bc5e6bcc811e76f46b1 60 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 56 8.0E-19 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tlie_0444 f2d34feb7a2b6bc5e6bcc811e76f46b1 60 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 7 35 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tlie_0444 f2d34feb7a2b6bc5e6bcc811e76f46b1 60 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 12.325 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tlie_0444 f2d34feb7a2b6bc5e6bcc811e76f46b1 60 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 59 2.4E-18 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Tlie_0596 940bd0870957358a4d11195d4702b7e9 520 PIRSF PIRSF002869 3 513 3.9E-128 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_0596 940bd0870957358a4d11195d4702b7e9 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 7 507 2.8E-113 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_0596 940bd0870957358a4d11195d4702b7e9 520 Pfam PF03023 MviN-like protein 33 467 1.6E-101 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_0596 940bd0870957358a4d11195d4702b7e9 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 8 466 17.975 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_0596 940bd0870957358a4d11195d4702b7e9 520 PRINTS PR01806 Virulence factor MviN signature 160 181 7.1E-48 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_0596 940bd0870957358a4d11195d4702b7e9 520 PRINTS PR01806 Virulence factor MviN signature 57 73 7.1E-48 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_0596 940bd0870957358a4d11195d4702b7e9 520 PRINTS PR01806 Virulence factor MviN signature 358 377 7.1E-48 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_0596 940bd0870957358a4d11195d4702b7e9 520 PRINTS PR01806 Virulence factor MviN signature 261 287 7.1E-48 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_0596 940bd0870957358a4d11195d4702b7e9 520 PRINTS PR01806 Virulence factor MviN signature 38 57 7.1E-48 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_0596 940bd0870957358a4d11195d4702b7e9 520 PRINTS PR01806 Virulence factor MviN signature 136 160 7.1E-48 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_0596 940bd0870957358a4d11195d4702b7e9 520 PRINTS PR01806 Virulence factor MviN signature 410 427 7.1E-48 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 SUPERFAMILY SSF50677 198 349 8.11E-57 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 SUPERFAMILY SSF47323 581 833 3.55E-63 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 886 15.857 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 SUPERFAMILY SSF46589 821 885 3.5E-13 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 TIGRFAM TIGR00422 valS: valine--tRNA ligase 10 868 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 SUPERFAMILY SSF52374 9 579 4.56E-148 T 14-10-2018 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 PRINTS PR00986 Valyl-tRNA synthetase signature 353 366 1.9E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 PRINTS PR00986 Valyl-tRNA synthetase signature 237 254 1.9E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 PRINTS PR00986 Valyl-tRNA synthetase signature 451 472 1.9E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 PRINTS PR00986 Valyl-tRNA synthetase signature 482 500 1.9E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 1.9E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 Gene3D G3DSA:3.40.50.620 28 531 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 20 569 7.1E-214 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 Pfam PF08264 Anticodon-binding domain of tRNA 612 757 1.2E-40 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 Gene3D G3DSA:3.90.740.10 181 350 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 Gene3D G3DSA:1.10.287.380 814 885 4.6E-17 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 821 884 9.7E-14 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Tlie_1064 9d3d2460acbd0e176868610bfdf4d379 886 Gene3D G3DSA:1.10.730.10 10 747 0.0 T 14-10-2018 Tlie_1799 41bb1554d0f1b4d59abaac7d4c3a79ea 531 SUPERFAMILY SSF161098 13 250 4.69E-40 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_1799 41bb1554d0f1b4d59abaac7d4c3a79ea 531 Gene3D G3DSA:1.10.3720.10 278 520 1.9E-27 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_1799 41bb1554d0f1b4d59abaac7d4c3a79ea 531 Gene3D G3DSA:1.10.3720.10 10 258 1.2E-46 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_1799 41bb1554d0f1b4d59abaac7d4c3a79ea 531 SUPERFAMILY SSF161098 278 510 1.83E-31 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_1799 41bb1554d0f1b4d59abaac7d4c3a79ea 531 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 339 511 1.2E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tlie_1799 41bb1554d0f1b4d59abaac7d4c3a79ea 531 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 258 2.1E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tlie_0358 add0afc8971daefd7f1dcb6935c0b2a6 420 SUPERFAMILY SSF81301 5 122 2.18E-29 T 14-10-2018 Tlie_0358 add0afc8971daefd7f1dcb6935c0b2a6 420 Gene3D G3DSA:1.10.3090.10 127 403 1.4E-28 T 14-10-2018 Tlie_0358 add0afc8971daefd7f1dcb6935c0b2a6 420 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 155 208 7.2E-6 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Tlie_0358 add0afc8971daefd7f1dcb6935c0b2a6 420 Gene3D G3DSA:3.30.460.10 2 126 4.9E-32 T 14-10-2018 Tlie_0358 add0afc8971daefd7f1dcb6935c0b2a6 420 SUPERFAMILY SSF81891 127 415 3.01E-34 T 14-10-2018 Tlie_0358 add0afc8971daefd7f1dcb6935c0b2a6 420 Pfam PF01743 Poly A polymerase head domain 22 126 1.9E-20 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Tlie_0358 add0afc8971daefd7f1dcb6935c0b2a6 420 Pfam PF01966 HD domain 233 327 2.2E-10 T 14-10-2018 IPR006674 HD domain Tlie_1168 c3cdf96a0ed188744073613c4d6cf49f 413 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 396 53.227 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tlie_1168 c3cdf96a0ed188744073613c4d6cf49f 413 Pfam PF00764 Arginosuccinate synthase 7 390 4.6E-166 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tlie_1168 c3cdf96a0ed188744073613c4d6cf49f 413 Gene3D G3DSA:3.90.1260.10 174 401 6.9E-93 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tlie_1168 c3cdf96a0ed188744073613c4d6cf49f 413 Gene3D G3DSA:3.40.50.620 1 173 3.6E-66 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1168 c3cdf96a0ed188744073613c4d6cf49f 413 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tlie_1168 c3cdf96a0ed188744073613c4d6cf49f 413 SUPERFAMILY SSF69864 170 396 1.02E-92 T 14-10-2018 Tlie_1168 c3cdf96a0ed188744073613c4d6cf49f 413 SUPERFAMILY SSF52402 3 203 5.45E-50 T 14-10-2018 Tlie_1168 c3cdf96a0ed188744073613c4d6cf49f 413 TIGRFAM TIGR00032 argG: argininosuccinate synthase 5 394 3.6E-159 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tlie_1553 939caa510b419169d7ae0982c524dc8b 274 SUPERFAMILY SSF53822 60 169 9.64E-12 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Tlie_1553 939caa510b419169d7ae0982c524dc8b 274 SMART SM00354 2 72 8.1E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Tlie_1553 939caa510b419169d7ae0982c524dc8b 274 SUPERFAMILY SSF47413 2 60 5.93E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tlie_1553 939caa510b419169d7ae0982c524dc8b 274 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 8.2E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Tlie_1553 939caa510b419169d7ae0982c524dc8b 274 Gene3D G3DSA:3.40.50.2300 56 165 4.2E-15 T 14-10-2018 Tlie_1553 939caa510b419169d7ae0982c524dc8b 274 Gene3D G3DSA:1.10.260.40 1 55 2.1E-23 T 14-10-2018 Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 Gene3D G3DSA:1.10.1780.10 1 150 7.1E-53 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 SMART SM01086 725 814 3.7E-37 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 Gene3D G3DSA:3.40.50.300 479 724 1.0E-97 T 14-10-2018 Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 725 805 2.5E-27 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 Gene3D G3DSA:1.10.8.60 725 820 7.3E-29 T 14-10-2018 Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 Pfam PF02151 UvrB/uvrC motif 427 462 2.2E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 596 614 3.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 551 569 3.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 625 643 3.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 658 672 3.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 143 2.1E-15 T 14-10-2018 IPR004176 Clp, N-terminal Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 68 6.1E-18 T 14-10-2018 IPR004176 Clp, N-terminal Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 Pfam PF07724 AAA domain (Cdc48 subfamily) 546 719 1.3E-55 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 Gene3D G3DSA:3.40.50.300 161 353 2.7E-73 T 14-10-2018 Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 215 344 2.0E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 Gene3D G3DSA:3.40.50.300 354 478 1.8E-38 T 14-10-2018 Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 SMART SM00382 547 687 4.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 SMART SM00382 210 350 1.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 SUPERFAMILY SSF81923 5 144 3.43E-29 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 SUPERFAMILY SSF52540 496 814 5.58E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1401 6d6eeaedbe085302fdaff20fa5ec09d1 820 SUPERFAMILY SSF52540 171 482 2.0E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0416 f65f1d1e516a3bb7edf41b7913289754 705 Pfam PF01734 Patatin-like phospholipase 36 226 1.0E-27 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Tlie_0416 f65f1d1e516a3bb7edf41b7913289754 705 Gene3D G3DSA:3.40.1090.10 27 134 5.1E-24 T 14-10-2018 Tlie_0416 f65f1d1e516a3bb7edf41b7913289754 705 Gene3D G3DSA:3.40.1090.10 140 278 5.0E-22 T 14-10-2018 Tlie_0416 f65f1d1e516a3bb7edf41b7913289754 705 SUPERFAMILY SSF52151 34 312 7.06E-49 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Tlie_0563 98688455609dbc1cab7c10706a6eaaa5 403 Gene3D G3DSA:3.40.640.10 1 251 1.6E-86 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0563 98688455609dbc1cab7c10706a6eaaa5 403 Gene3D G3DSA:3.90.1150.10 252 401 1.1E-28 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_0563 98688455609dbc1cab7c10706a6eaaa5 403 SUPERFAMILY SSF53383 2 333 1.53E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0563 98688455609dbc1cab7c10706a6eaaa5 403 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 38 329 8.1E-87 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Tlie_0091 f9764a488f3f7f431129690e08ba4cdf 253 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 135 1.4E-33 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Tlie_0091 f9764a488f3f7f431129690e08ba4cdf 253 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 232 2.8E-22 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Tlie_0091 f9764a488f3f7f431129690e08ba4cdf 253 SUPERFAMILY SSF117143 92 212 3.92E-27 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Tlie_0091 f9764a488f3f7f431129690e08ba4cdf 253 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 179 248 2.5E-17 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tlie_0091 f9764a488f3f7f431129690e08ba4cdf 253 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 231 3.3E-54 T 14-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 Tlie_0091 f9764a488f3f7f431129690e08ba4cdf 253 Pfam PF00460 Flagella basal body rod protein 9 34 8.4E-9 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tlie_0091 f9764a488f3f7f431129690e08ba4cdf 253 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Tlie_0768 c5c2cf141da93644e47b264fdb7f9720 322 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Tlie_0768 c5c2cf141da93644e47b264fdb7f9720 322 Pfam PF14572 Phosphoribosyl synthetase-associated domain 213 322 3.1E-28 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Tlie_0768 c5c2cf141da93644e47b264fdb7f9720 322 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 124 2.3E-48 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Tlie_0768 c5c2cf141da93644e47b264fdb7f9720 322 Gene3D G3DSA:3.40.50.2020 151 298 3.5E-122 T 14-10-2018 Tlie_0768 c5c2cf141da93644e47b264fdb7f9720 322 SMART SM01400 8 124 1.5E-78 T 14-10-2018 Tlie_0768 c5c2cf141da93644e47b264fdb7f9720 322 SUPERFAMILY SSF53271 73 313 2.09E-63 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tlie_0768 c5c2cf141da93644e47b264fdb7f9720 322 Gene3D G3DSA:3.40.50.2020 11 310 3.5E-122 T 14-10-2018 Tlie_0768 c5c2cf141da93644e47b264fdb7f9720 322 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 8 322 3.1E-119 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Tlie_0768 c5c2cf141da93644e47b264fdb7f9720 322 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 8 322 49.48 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Tlie_0284 5d8282d90a22fdb706361f59cb2cf852 418 Gene3D G3DSA:3.30.565.10 267 415 1.3E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0284 5d8282d90a22fdb706361f59cb2cf852 418 SUPERFAMILY SSF55874 256 413 5.11E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0284 5d8282d90a22fdb706361f59cb2cf852 418 SMART SM00387 308 413 2.7E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_0284 5d8282d90a22fdb706361f59cb2cf852 418 Gene3D G3DSA:1.10.287.130 196 264 2.5E-15 T 14-10-2018 Tlie_0284 5d8282d90a22fdb706361f59cb2cf852 418 SMART SM00388 202 266 7.2E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tlie_0284 5d8282d90a22fdb706361f59cb2cf852 418 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 308 411 1.8E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_0284 5d8282d90a22fdb706361f59cb2cf852 418 Gene3D G3DSA:1.20.1480.50 101 195 1.1E-9 T 14-10-2018 Tlie_0284 5d8282d90a22fdb706361f59cb2cf852 418 Pfam PF00512 His Kinase A (phospho-acceptor) domain 202 263 5.8E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tlie_0284 5d8282d90a22fdb706361f59cb2cf852 418 SUPERFAMILY SSF158472 136 187 1.14E-5 T 14-10-2018 Tlie_0284 5d8282d90a22fdb706361f59cb2cf852 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 360 4.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_0284 5d8282d90a22fdb706361f59cb2cf852 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 393 4.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_0284 5d8282d90a22fdb706361f59cb2cf852 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 374 4.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_0284 5d8282d90a22fdb706361f59cb2cf852 418 SUPERFAMILY SSF47384 195 263 2.35E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tlie_1316 8f293c9fb4d7e2a8f14e3b99dcedf892 263 Gene3D G3DSA:3.40.50.720 14 261 2.4E-81 T 14-10-2018 Tlie_1316 8f293c9fb4d7e2a8f14e3b99dcedf892 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 1.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1316 8f293c9fb4d7e2a8f14e3b99dcedf892 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 1.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1316 8f293c9fb4d7e2a8f14e3b99dcedf892 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 1.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1316 8f293c9fb4d7e2a8f14e3b99dcedf892 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 5.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1316 8f293c9fb4d7e2a8f14e3b99dcedf892 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 5.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1316 8f293c9fb4d7e2a8f14e3b99dcedf892 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 5.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1316 8f293c9fb4d7e2a8f14e3b99dcedf892 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 5.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1316 8f293c9fb4d7e2a8f14e3b99dcedf892 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 24 41 5.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1316 8f293c9fb4d7e2a8f14e3b99dcedf892 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 5.4E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1316 8f293c9fb4d7e2a8f14e3b99dcedf892 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Tlie_1316 8f293c9fb4d7e2a8f14e3b99dcedf892 263 SUPERFAMILY SSF51735 21 260 9.58E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1316 8f293c9fb4d7e2a8f14e3b99dcedf892 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 29 257 4.0E-65 T 14-10-2018 Tlie_1257 109e857d3e6d9262428bef041ecbfdd8 260 SUPERFAMILY SSF53067 124 253 2.73E-38 T 14-10-2018 Tlie_1257 109e857d3e6d9262428bef041ecbfdd8 260 Gene3D G3DSA:3.30.420.40 90 260 6.3E-60 T 14-10-2018 Tlie_1257 109e857d3e6d9262428bef041ecbfdd8 260 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 249 5.1E-65 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Tlie_1257 109e857d3e6d9262428bef041ecbfdd8 260 Gene3D G3DSA:3.30.420.40 1 88 3.8E-27 T 14-10-2018 Tlie_1257 109e857d3e6d9262428bef041ecbfdd8 260 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 254 33.375 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Tlie_1257 109e857d3e6d9262428bef041ecbfdd8 260 Pfam PF03309 Type III pantothenate kinase 3 205 3.7E-62 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Tlie_1257 109e857d3e6d9262428bef041ecbfdd8 260 SUPERFAMILY SSF53067 2 122 5.68E-30 T 14-10-2018 Tlie_0254 5169200392fb359be96482be48a0ac13 476 Pfam PF00990 Diguanylate cyclase, GGDEF domain 308 459 8.1E-42 T 14-10-2018 IPR000160 GGDEF domain Tlie_0254 5169200392fb359be96482be48a0ac13 476 Gene3D G3DSA:3.30.70.270 301 463 3.8E-49 T 14-10-2018 Tlie_0254 5169200392fb359be96482be48a0ac13 476 SMART SM00065 161 304 6.5E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tlie_0254 5169200392fb359be96482be48a0ac13 476 Pfam PF13185 GAF domain 162 293 1.3E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tlie_0254 5169200392fb359be96482be48a0ac13 476 SMART SM00267 296 464 4.3E-47 T 14-10-2018 IPR000160 GGDEF domain Tlie_0254 5169200392fb359be96482be48a0ac13 476 SUPERFAMILY SSF55073 312 458 2.51E-40 T 14-10-2018 IPR029787 Nucleotide cyclase Tlie_0254 5169200392fb359be96482be48a0ac13 476 Gene3D G3DSA:3.30.450.40 133 294 2.2E-23 T 14-10-2018 IPR029016 GAF-like domain superfamily Tlie_0254 5169200392fb359be96482be48a0ac13 476 SUPERFAMILY SSF55781 134 291 3.05E-23 T 14-10-2018 Tlie_0254 5169200392fb359be96482be48a0ac13 476 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 306 460 5.6E-45 T 14-10-2018 IPR000160 GGDEF domain Tlie_1266 9bd75c14663631720f69c73c92a0baf8 1010 Pfam PF04851 Type III restriction enzyme, res subunit 10 250 2.3E-12 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Tlie_1266 9bd75c14663631720f69c73c92a0baf8 1010 Gene3D G3DSA:3.40.50.300 69 268 8.5E-11 T 14-10-2018 Tlie_1266 9bd75c14663631720f69c73c92a0baf8 1010 SUPERFAMILY SSF52540 10 275 3.59E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1266 9bd75c14663631720f69c73c92a0baf8 1010 SUPERFAMILY SSF52540 88 575 1.93E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1266 9bd75c14663631720f69c73c92a0baf8 1010 Gene3D G3DSA:3.40.50.300 389 603 3.7E-9 T 14-10-2018 Tlie_1834 358b5fdd33d14cc1f2e422722cc7b089 420 Pfam PF00330 Aconitase family (aconitate hydratase) 79 411 1.7E-97 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1834 358b5fdd33d14cc1f2e422722cc7b089 420 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 5 417 6.3E-165 T 14-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 Tlie_1834 358b5fdd33d14cc1f2e422722cc7b089 420 Gene3D G3DSA:3.30.499.20 5 269 7.5E-99 T 14-10-2018 Tlie_1834 358b5fdd33d14cc1f2e422722cc7b089 420 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 4 417 4.8E-156 T 14-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Tlie_1834 358b5fdd33d14cc1f2e422722cc7b089 420 PRINTS PR00415 Aconitase family signature 203 216 3.6E-18 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1834 358b5fdd33d14cc1f2e422722cc7b089 420 PRINTS PR00415 Aconitase family signature 189 202 3.6E-18 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1834 358b5fdd33d14cc1f2e422722cc7b089 420 PRINTS PR00415 Aconitase family signature 352 365 3.6E-18 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1834 358b5fdd33d14cc1f2e422722cc7b089 420 PRINTS PR00415 Aconitase family signature 127 142 3.6E-18 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1834 358b5fdd33d14cc1f2e422722cc7b089 420 PRINTS PR00415 Aconitase family signature 113 126 3.6E-18 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1834 358b5fdd33d14cc1f2e422722cc7b089 420 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 4 419 46.424 T 14-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Tlie_1834 358b5fdd33d14cc1f2e422722cc7b089 420 ProSitePatterns PS00450 Aconitase family signature 1. 292 308 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Tlie_1834 358b5fdd33d14cc1f2e422722cc7b089 420 SUPERFAMILY SSF53732 2 419 2.49E-138 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Tlie_1834 358b5fdd33d14cc1f2e422722cc7b089 420 Gene3D G3DSA:3.30.499.10 272 417 2.3E-53 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 SMART SM01058 390 481 1.3E-18 T 14-10-2018 IPR003711 CarD-like/TRCF domain Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 SMART SM00490 731 815 4.1E-17 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 SUPERFAMILY SSF141259 389 453 7.98E-12 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 Gene3D G3DSA:3.90.1150.50 903 1011 1.1E-17 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 SUPERFAMILY SSF52540 688 894 5.45E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 Gene3D G3DSA:3.40.50.300 447 686 8.2E-207 T 14-10-2018 Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 SUPERFAMILY SSF52540 26 273 1.99E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 35 1002 23.349 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 SUPERFAMILY SSF52540 440 688 2.23E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 Gene3D G3DSA:3.30.2060.10 124 207 1.1E-26 T 14-10-2018 Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 SUPERFAMILY SSF143517 898 1009 1.15E-18 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 Pfam PF02559 CarD-like/TRCF domain 390 480 3.0E-16 T 14-10-2018 IPR003711 CarD-like/TRCF domain Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 SMART SM00487 505 695 5.4E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 Gene3D G3DSA:2.30.30.840 388 446 8.2E-207 T 14-10-2018 Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 Pfam PF00271 Helicase conserved C-terminal domain 709 814 2.3E-15 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 Gene3D G3DSA:3.40.50.300 387 894 8.2E-207 T 14-10-2018 Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 Pfam PF00270 DEAD/DEAH box helicase 511 645 4.0E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 Pfam PF03461 TRCF domain 910 990 7.6E-14 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Tlie_0771 9fe96d9ad6fe82c6f047879f61645342 1041 SMART SM00982 907 1002 1.7E-7 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Tlie_1107 e626d76ee4d813810ba2e2043eff8336 68 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 57 19.408 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1107 e626d76ee4d813810ba2e2043eff8336 68 SUPERFAMILY SSF57829 1 58 1.04E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Tlie_1107 e626d76ee4d813810ba2e2043eff8336 68 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 57 6.9E-21 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1107 e626d76ee4d813810ba2e2043eff8336 68 Pfam PF01783 Ribosomal L32p protein family 2 58 8.0E-24 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0624 6cb0e076353a93e9745a3f3764ca8dae 216 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 7 214 7.1E-28 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Tlie_0624 6cb0e076353a93e9745a3f3764ca8dae 216 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 113 211 1.7E-30 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 Tlie_0624 6cb0e076353a93e9745a3f3764ca8dae 216 SUPERFAMILY SSF63848 111 214 3.01E-28 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 Tlie_0624 6cb0e076353a93e9745a3f3764ca8dae 216 Gene3D G3DSA:2.160.20.70 108 216 1.9E-34 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 Tlie_0624 6cb0e076353a93e9745a3f3764ca8dae 216 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 6 215 19.206 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Tlie_1122 d10ec5c0cfc145bd16c2b606bb33ba60 408 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 193 376 1.3E-72 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Tlie_1122 d10ec5c0cfc145bd16c2b606bb33ba60 408 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 8 400 1.0E-128 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Tlie_1122 d10ec5c0cfc145bd16c2b606bb33ba60 408 Gene3D G3DSA:3.40.50.1950 5 189 1.0E-50 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tlie_1122 d10ec5c0cfc145bd16c2b606bb33ba60 408 Pfam PF02441 Flavoprotein 11 185 1.1E-37 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Tlie_1122 d10ec5c0cfc145bd16c2b606bb33ba60 408 SUPERFAMILY SSF102645 191 403 5.62E-74 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Tlie_1122 d10ec5c0cfc145bd16c2b606bb33ba60 408 SUPERFAMILY SSF52507 6 184 1.57E-50 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tlie_1122 d10ec5c0cfc145bd16c2b606bb33ba60 408 Gene3D G3DSA:3.40.50.10300 190 406 1.4E-77 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Tlie_1236 e4ec413313ef1e4f1cb942b6e1b6d4cc 321 Gene3D G3DSA:3.90.25.10 184 305 2.8E-75 T 14-10-2018 Tlie_1236 e4ec413313ef1e4f1cb942b6e1b6d4cc 321 SUPERFAMILY SSF51735 1 315 4.65E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1236 e4ec413313ef1e4f1cb942b6e1b6d4cc 321 Gene3D G3DSA:3.40.50.720 5 299 2.8E-75 T 14-10-2018 Tlie_1236 e4ec413313ef1e4f1cb942b6e1b6d4cc 321 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 309 1.7E-55 T 14-10-2018 IPR016040 NAD(P)-binding domain Tlie_0804 b4f932af8067ef39b57e5cba63da270a 537 SUPERFAMILY SSF56281 1 459 1.06E-130 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_0804 b4f932af8067ef39b57e5cba63da270a 537 Gene3D G3DSA:3.60.15.10 6 433 6.1E-142 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_0804 b4f932af8067ef39b57e5cba63da270a 537 Pfam PF16661 Metallo-beta-lactamase superfamily domain 18 169 1.4E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tlie_0804 b4f932af8067ef39b57e5cba63da270a 537 SMART SM01027 251 376 5.2E-54 T 14-10-2018 IPR022712 Beta-Casp domain Tlie_0804 b4f932af8067ef39b57e5cba63da270a 537 Gene3D G3DSA:3.40.50.10890 219 402 6.1E-142 T 14-10-2018 Tlie_0804 b4f932af8067ef39b57e5cba63da270a 537 Pfam PF10996 Beta-Casp domain 251 376 2.0E-26 T 14-10-2018 IPR022712 Beta-Casp domain Tlie_0804 b4f932af8067ef39b57e5cba63da270a 537 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 390 451 4.4E-16 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Tlie_0804 b4f932af8067ef39b57e5cba63da270a 537 SMART SM00849 13 238 7.9E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tlie_1068 4d855f27c14b73499990137a73025c79 192 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 89 100 - T 14-10-2018 IPR018215 ClpP, Ser active site Tlie_1068 4d855f27c14b73499990137a73025c79 192 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 111 124 - T 14-10-2018 IPR033135 ClpP, histidine active site Tlie_1068 4d855f27c14b73499990137a73025c79 192 SUPERFAMILY SSF52096 9 190 1.65E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tlie_1068 4d855f27c14b73499990137a73025c79 192 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 2 191 3.1E-101 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tlie_1068 4d855f27c14b73499990137a73025c79 192 Gene3D G3DSA:3.90.226.10 1 192 1.7E-83 T 14-10-2018 Tlie_1068 4d855f27c14b73499990137a73025c79 192 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 2 192 44.302 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tlie_1068 4d855f27c14b73499990137a73025c79 192 Pfam PF00574 Clp protease 12 191 1.4E-87 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Tlie_1068 4d855f27c14b73499990137a73025c79 192 PRINTS PR00127 Clp protease catalytic subunit P signature 58 78 5.0E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tlie_1068 4d855f27c14b73499990137a73025c79 192 PRINTS PR00127 Clp protease catalytic subunit P signature 110 129 5.0E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tlie_1068 4d855f27c14b73499990137a73025c79 192 PRINTS PR00127 Clp protease catalytic subunit P signature 89 106 5.0E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tlie_1068 4d855f27c14b73499990137a73025c79 192 PRINTS PR00127 Clp protease catalytic subunit P signature 167 186 5.0E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tlie_1068 4d855f27c14b73499990137a73025c79 192 PRINTS PR00127 Clp protease catalytic subunit P signature 18 33 5.0E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tlie_0060 f95222fbb42c828def48cd11324333fb 220 SUPERFAMILY SSF55021 134 206 9.87E-13 T 14-10-2018 Tlie_0060 f95222fbb42c828def48cd11324333fb 220 Pfam PF01842 ACT domain 148 204 1.6E-7 T 14-10-2018 IPR002912 ACT domain Tlie_0060 f95222fbb42c828def48cd11324333fb 220 PIRSF PIRSF036692 2 217 7.7E-75 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Tlie_0060 f95222fbb42c828def48cd11324333fb 220 Gene3D G3DSA:3.30.70.260 136 214 8.0E-13 T 14-10-2018 Tlie_0060 f95222fbb42c828def48cd11324333fb 220 Gene3D G3DSA:3.30.1330.90 10 132 2.0E-18 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Tlie_0060 f95222fbb42c828def48cd11324333fb 220 SUPERFAMILY SSF143548 16 133 6.54E-28 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Tlie_0060 f95222fbb42c828def48cd11324333fb 220 Pfam PF03315 Serine dehydratase beta chain 10 79 5.0E-11 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Tlie_0060 f95222fbb42c828def48cd11324333fb 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 5 203 6.8E-57 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Tlie_0495 c33d18fca0afe1f3c1498bda3a972932 212 SUPERFAMILY SSF52172 1 134 1.99E-27 T 14-10-2018 IPR011006 CheY-like superfamily Tlie_0495 c33d18fca0afe1f3c1498bda3a972932 212 SMART SM00421 148 205 7.7E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_0495 c33d18fca0afe1f3c1498bda3a972932 212 SMART SM00448 2 116 1.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0495 c33d18fca0afe1f3c1498bda3a972932 212 SUPERFAMILY SSF46894 146 210 2.07E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tlie_0495 c33d18fca0afe1f3c1498bda3a972932 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 1.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_0495 c33d18fca0afe1f3c1498bda3a972932 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 1.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_0495 c33d18fca0afe1f3c1498bda3a972932 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 1.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_0495 c33d18fca0afe1f3c1498bda3a972932 212 Gene3D G3DSA:3.40.50.12740 2 210 4.2E-57 T 14-10-2018 Tlie_0495 c33d18fca0afe1f3c1498bda3a972932 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 202 6.0E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_0495 c33d18fca0afe1f3c1498bda3a972932 212 Pfam PF00072 Response regulator receiver domain 4 116 1.4E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0495 c33d18fca0afe1f3c1498bda3a972932 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_0403 c8ad4c67a1352594e1526a605c010959 134 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 117 5.3E-27 T 14-10-2018 Tlie_0403 c8ad4c67a1352594e1526a605c010959 134 SUPERFAMILY SSF54593 5 133 4.97E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Tlie_0403 c8ad4c67a1352594e1526a605c010959 134 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 6 132 1.7E-53 T 14-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 Tlie_0403 c8ad4c67a1352594e1526a605c010959 134 Gene3D G3DSA:3.10.180.10 5 133 5.7E-44 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Tlie_0612 575eeee72583cfcba67c81b0b73bd2c9 461 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 32 448 1.8E-141 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Tlie_0612 575eeee72583cfcba67c81b0b73bd2c9 461 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 4 461 42.052 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Tlie_0612 575eeee72583cfcba67c81b0b73bd2c9 461 Gene3D G3DSA:3.30.70.3400 32 119 7.6E-29 T 14-10-2018 Tlie_0612 575eeee72583cfcba67c81b0b73bd2c9 461 Gene3D G3DSA:3.30.1360.200 143 272 1.1E-41 T 14-10-2018 Tlie_0612 575eeee72583cfcba67c81b0b73bd2c9 461 Pfam PF02355 Protein export membrane protein 282 451 5.2E-20 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Tlie_0612 575eeee72583cfcba67c81b0b73bd2c9 461 PRINTS PR00702 Acriflavin resistance protein family signature 350 374 1.7E-10 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0612 575eeee72583cfcba67c81b0b73bd2c9 461 PRINTS PR00702 Acriflavin resistance protein family signature 425 448 1.7E-10 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0612 575eeee72583cfcba67c81b0b73bd2c9 461 PRINTS PR00702 Acriflavin resistance protein family signature 297 320 1.7E-10 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0612 575eeee72583cfcba67c81b0b73bd2c9 461 SUPERFAMILY SSF82866 258 454 1.7E-44 T 14-10-2018 Tlie_0612 575eeee72583cfcba67c81b0b73bd2c9 461 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 211 441 6.5E-81 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tlie_0612 575eeee72583cfcba67c81b0b73bd2c9 461 Gene3D G3DSA:1.20.1640.10 273 460 5.5E-14 T 14-10-2018 Tlie_0074 53e9f24bdb9301134f998650c4bdafee 513 Gene3D G3DSA:3.30.300.30 121 219 3.1E-13 T 14-10-2018 Tlie_0074 53e9f24bdb9301134f998650c4bdafee 513 PIRSF PIRSF004862 481 513 0.17 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tlie_0074 53e9f24bdb9301134f998650c4bdafee 513 PIRSF PIRSF004862 1 490 1.9E-135 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tlie_0074 53e9f24bdb9301134f998650c4bdafee 513 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 8 413 2.1E-90 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tlie_0074 53e9f24bdb9301134f998650c4bdafee 513 Pfam PF01514 Secretory protein of YscJ/FliF family 30 219 5.4E-70 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF Tlie_0074 53e9f24bdb9301134f998650c4bdafee 513 PRINTS PR01009 Flagellar M-ring protein signature 271 289 1.7E-29 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tlie_0074 53e9f24bdb9301134f998650c4bdafee 513 PRINTS PR01009 Flagellar M-ring protein signature 195 213 1.7E-29 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tlie_0074 53e9f24bdb9301134f998650c4bdafee 513 PRINTS PR01009 Flagellar M-ring protein signature 152 166 1.7E-29 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tlie_0074 53e9f24bdb9301134f998650c4bdafee 513 PRINTS PR01009 Flagellar M-ring protein signature 346 370 1.7E-29 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tlie_0074 53e9f24bdb9301134f998650c4bdafee 513 PRINTS PR01009 Flagellar M-ring protein signature 120 138 1.7E-29 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tlie_0074 53e9f24bdb9301134f998650c4bdafee 513 Pfam PF08345 Flagellar M-ring protein C-terminal 258 409 2.9E-34 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal Tlie_1080 8a256a9a8a0e3fcc228e50b1423e71f2 302 Gene3D G3DSA:1.20.120.140 5 300 1.7E-98 T 14-10-2018 Tlie_1080 8a256a9a8a0e3fcc228e50b1423e71f2 302 SMART SM00962 101 302 2.2E-96 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tlie_1080 8a256a9a8a0e3fcc228e50b1423e71f2 302 Gene3D G3DSA:3.40.50.300 101 290 1.7E-98 T 14-10-2018 Tlie_1080 8a256a9a8a0e3fcc228e50b1423e71f2 302 SUPERFAMILY SSF52540 97 301 4.13E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1080 8a256a9a8a0e3fcc228e50b1423e71f2 302 SMART SM00382 100 280 1.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1080 8a256a9a8a0e3fcc228e50b1423e71f2 302 SMART SM00963 6 85 7.8E-10 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tlie_1080 8a256a9a8a0e3fcc228e50b1423e71f2 302 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 28 302 55.5 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Tlie_1080 8a256a9a8a0e3fcc228e50b1423e71f2 302 SUPERFAMILY SSF47364 11 88 9.72E-14 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Tlie_1080 8a256a9a8a0e3fcc228e50b1423e71f2 302 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 31 301 2.3E-100 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Tlie_1080 8a256a9a8a0e3fcc228e50b1423e71f2 302 Pfam PF02881 SRP54-type protein, helical bundle domain 19 81 4.6E-11 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tlie_1080 8a256a9a8a0e3fcc228e50b1423e71f2 302 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 275 288 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tlie_1080 8a256a9a8a0e3fcc228e50b1423e71f2 302 Pfam PF00448 SRP54-type protein, GTPase domain 102 301 5.7E-71 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tlie_1583 870e43fb0d451145a3dd27641b7ef212 336 Pfam PF05544 Proline racemase 9 332 6.4E-111 T 14-10-2018 IPR008794 Proline racemase family Tlie_1583 870e43fb0d451145a3dd27641b7ef212 336 Gene3D G3DSA:3.10.310.10 145 310 1.7E-121 T 14-10-2018 Tlie_1583 870e43fb0d451145a3dd27641b7ef212 336 Gene3D G3DSA:3.10.310.10 9 333 1.7E-121 T 14-10-2018 Tlie_1583 870e43fb0d451145a3dd27641b7ef212 336 PIRSF PIRSF029792 1 335 1.3E-116 T 14-10-2018 IPR008794 Proline racemase family Tlie_1583 870e43fb0d451145a3dd27641b7ef212 336 SUPERFAMILY SSF54506 1 332 1.88E-102 T 14-10-2018 Tlie_1519 37d4d75b7690cfe49afb22b5047a41be 439 Pfam PF12002 MgsA AAA+ ATPase C terminal 276 429 1.8E-56 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal Tlie_1519 37d4d75b7690cfe49afb22b5047a41be 439 SUPERFAMILY SSF48019 261 431 1.87E-62 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Tlie_1519 37d4d75b7690cfe49afb22b5047a41be 439 Gene3D G3DSA:3.40.50.300 12 173 3.7E-42 T 14-10-2018 Tlie_1519 37d4d75b7690cfe49afb22b5047a41be 439 Gene3D G3DSA:1.20.272.10 250 353 5.1E-42 T 14-10-2018 Tlie_1519 37d4d75b7690cfe49afb22b5047a41be 439 Gene3D G3DSA:1.10.8.60 175 248 5.5E-15 T 14-10-2018 Tlie_1519 37d4d75b7690cfe49afb22b5047a41be 439 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 63 169 2.9E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tlie_1519 37d4d75b7690cfe49afb22b5047a41be 439 Gene3D G3DSA:1.10.3710.10 357 436 1.7E-16 T 14-10-2018 Tlie_1519 37d4d75b7690cfe49afb22b5047a41be 439 SMART SM00382 58 174 1.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1519 37d4d75b7690cfe49afb22b5047a41be 439 SUPERFAMILY SSF52540 20 244 7.77E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1519 37d4d75b7690cfe49afb22b5047a41be 439 Pfam PF16193 AAA C-terminal domain 199 275 2.1E-22 T 14-10-2018 IPR032423 AAA C-terminal domain Tlie_0884 37d567651e608be1ad435241404b8cc8 252 Gene3D G3DSA:3.40.50.970 77 241 1.4E-21 T 14-10-2018 Tlie_0884 37d567651e608be1ad435241404b8cc8 252 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 55 212 7.2E-23 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tlie_0884 37d567651e608be1ad435241404b8cc8 252 SUPERFAMILY SSF52518 18 246 1.18E-56 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1710 0326acd3d1cd99fb2b07879e3cc87da7 665 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 34 637 1.5E-217 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ Tlie_1710 0326acd3d1cd99fb2b07879e3cc87da7 665 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 130 564 1.1E-101 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tlie_1420 5341a089a3ef7d2083889e44f963cb4d 116 Gene3D G3DSA:2.30.30.790 3 114 2.4E-15 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1420 5341a089a3ef7d2083889e44f963cb4d 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.669 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1420 5341a089a3ef7d2083889e44f963cb4d 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1420 5341a089a3ef7d2083889e44f963cb4d 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 5 113 1.0E-49 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1420 5341a089a3ef7d2083889e44f963cb4d 116 SUPERFAMILY SSF50104 4 114 7.22E-49 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tlie_1420 5341a089a3ef7d2083889e44f963cb4d 116 Pfam PF01245 Ribosomal protein L19 5 113 2.8E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1420 5341a089a3ef7d2083889e44f963cb4d 116 PRINTS PR00061 Ribosomal protein L19 signature 88 113 6.2E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1420 5341a089a3ef7d2083889e44f963cb4d 116 PRINTS PR00061 Ribosomal protein L19 signature 34 63 6.2E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1420 5341a089a3ef7d2083889e44f963cb4d 116 PRINTS PR00061 Ribosomal protein L19 signature 4 33 6.2E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1420 5341a089a3ef7d2083889e44f963cb4d 116 PIRSF PIRSF002191 1 116 4.0E-54 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0090 c3409d3a3d3ba59563737c74d870a020 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Tlie_0090 c3409d3a3d3ba59563737c74d870a020 135 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 82 131 1.6E-12 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tlie_0090 c3409d3a3d3ba59563737c74d870a020 135 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 1.1E-50 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 Tlie_0090 c3409d3a3d3ba59563737c74d870a020 135 Pfam PF00460 Flagella basal body rod protein 7 34 5.2E-8 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tlie_0484 7d3df6b537e6216a553bccb7fb51be5a 353 Gene3D G3DSA:3.40.50.300 3 268 3.0E-70 T 14-10-2018 Tlie_0484 7d3df6b537e6216a553bccb7fb51be5a 353 SMART SM00382 30 217 6.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0484 7d3df6b537e6216a553bccb7fb51be5a 353 SUPERFAMILY SSF54631 303 351 3.54E-5 T 14-10-2018 Tlie_0484 7d3df6b537e6216a553bccb7fb51be5a 353 SUPERFAMILY SSF52540 5 244 1.08E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0484 7d3df6b537e6216a553bccb7fb51be5a 353 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0484 7d3df6b537e6216a553bccb7fb51be5a 353 Pfam PF00005 ABC transporter 21 167 1.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1278 14419b79e6023196cbea268cdf837996 131 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 126 1.2E-23 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Tlie_1278 14419b79e6023196cbea268cdf837996 131 Gene3D G3DSA:3.30.420.270 56 123 2.4E-10 T 14-10-2018 Tlie_0912 b9c66a1c41a0558e4e8b5aa3ad406d3c 587 SUPERFAMILY SSF47917 448 526 6.54E-16 T 14-10-2018 Tlie_0912 b9c66a1c41a0558e4e8b5aa3ad406d3c 587 SUPERFAMILY SSF52540 185 438 3.13E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0912 b9c66a1c41a0558e4e8b5aa3ad406d3c 587 Gene3D G3DSA:2.40.50.100 116 184 6.8E-162 T 14-10-2018 Tlie_0912 b9c66a1c41a0558e4e8b5aa3ad406d3c 587 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 9 69 6.1E-11 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0912 b9c66a1c41a0558e4e8b5aa3ad406d3c 587 Gene3D G3DSA:3.40.50.300 74 434 6.8E-162 T 14-10-2018 Tlie_0912 b9c66a1c41a0558e4e8b5aa3ad406d3c 587 Gene3D G3DSA:2.40.30.20 1 72 1.7E-23 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0912 b9c66a1c41a0558e4e8b5aa3ad406d3c 587 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 2 582 46.066 T 14-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0912 b9c66a1c41a0558e4e8b5aa3ad406d3c 587 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 211 433 2.1E-90 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0912 b9c66a1c41a0558e4e8b5aa3ad406d3c 587 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 86 202 1.0E-24 T 14-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0912 b9c66a1c41a0558e4e8b5aa3ad406d3c 587 Gene3D G3DSA:1.10.1140.10 435 585 1.2E-29 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0912 b9c66a1c41a0558e4e8b5aa3ad406d3c 587 SUPERFAMILY SSF50615 2 71 8.63E-9 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0591 aef6ed4ab484427342ab7644860dbeaa 404 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tlie_0591 aef6ed4ab484427342ab7644860dbeaa 404 PIRSF PIRSF000726 54 404 9.1E-106 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tlie_0591 aef6ed4ab484427342ab7644860dbeaa 404 PIRSF PIRSF000726 1 62 1.9E-14 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tlie_0591 aef6ed4ab484427342ab7644860dbeaa 404 Gene3D G3DSA:3.30.70.260 253 399 1.1E-46 T 14-10-2018 Tlie_0591 aef6ed4ab484427342ab7644860dbeaa 404 Gene3D G3DSA:3.40.1160.10 1 252 9.8E-85 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tlie_0591 aef6ed4ab484427342ab7644860dbeaa 404 Gene3D G3DSA:3.30.70.260 259 336 1.1E-46 T 14-10-2018 Tlie_0591 aef6ed4ab484427342ab7644860dbeaa 404 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 400 2.6E-105 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tlie_0591 aef6ed4ab484427342ab7644860dbeaa 404 Pfam PF00696 Amino acid kinase family 3 230 5.5E-51 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Tlie_0591 aef6ed4ab484427342ab7644860dbeaa 404 SUPERFAMILY SSF53633 4 242 2.23E-68 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tlie_0591 aef6ed4ab484427342ab7644860dbeaa 404 Pfam PF13840 ACT domain 338 397 1.0E-11 T 14-10-2018 IPR027795 CASTOR, ACT domain Tlie_0591 aef6ed4ab484427342ab7644860dbeaa 404 SUPERFAMILY SSF55021 327 402 5.89E-20 T 14-10-2018 Tlie_0591 aef6ed4ab484427342ab7644860dbeaa 404 SUPERFAMILY SSF55021 247 323 7.02E-14 T 14-10-2018 Tlie_1127 bbdc8a9448fe7f27609facd63691b66d 216 SMART SM00563 41 155 9.5E-36 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Tlie_1127 bbdc8a9448fe7f27609facd63691b66d 216 Pfam PF01553 Acyltransferase 33 152 2.4E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Tlie_1127 bbdc8a9448fe7f27609facd63691b66d 216 SUPERFAMILY SSF69593 6 213 3.14E-46 T 14-10-2018 Tlie_1754 d3a72993bbf467a5767602c64556aada 327 PIRSF PIRSF001439 2 327 5.9E-60 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Tlie_1754 d3a72993bbf467a5767602c64556aada 327 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 7 319 3.6E-59 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Tlie_1754 d3a72993bbf467a5767602c64556aada 327 SUPERFAMILY SSF51735 3 326 3.82E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1754 d3a72993bbf467a5767602c64556aada 327 Gene3D G3DSA:3.40.50.720 128 301 2.2E-87 T 14-10-2018 Tlie_1754 d3a72993bbf467a5767602c64556aada 327 Gene3D G3DSA:3.30.1780.10 8 323 2.2E-87 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 Tlie_1047 2dbd026a420ff34bede82ba3c2e0b33c 352 PIRSF PIRSF004640 1 352 1.6E-109 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Tlie_1047 2dbd026a420ff34bede82ba3c2e0b33c 352 Gene3D G3DSA:3.30.413.10 259 352 4.6E-25 T 14-10-2018 Tlie_1047 2dbd026a420ff34bede82ba3c2e0b33c 352 Gene3D G3DSA:3.20.20.20 2 258 3.5E-82 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tlie_1047 2dbd026a420ff34bede82ba3c2e0b33c 352 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 4 350 27.295 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Tlie_1047 2dbd026a420ff34bede82ba3c2e0b33c 352 SUPERFAMILY SSF56014 262 350 8.29E-10 T 14-10-2018 Tlie_1047 2dbd026a420ff34bede82ba3c2e0b33c 352 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 7 346 3.4E-94 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Tlie_1047 2dbd026a420ff34bede82ba3c2e0b33c 352 SUPERFAMILY SSF51717 36 210 4.39E-11 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tlie_1047 2dbd026a420ff34bede82ba3c2e0b33c 352 Pfam PF04551 GcpE protein 10 350 8.5E-108 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Tlie_0829 9783fb40d6090b5bcd0543ae2790abb0 213 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 117 203 18.942 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Tlie_0829 9783fb40d6090b5bcd0543ae2790abb0 213 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 6 208 35.682 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 Tlie_0829 9783fb40d6090b5bcd0543ae2790abb0 213 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 121 206 6.4E-16 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Tlie_0829 9783fb40d6090b5bcd0543ae2790abb0 213 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 4 107 29.344 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Tlie_0829 9783fb40d6090b5bcd0543ae2790abb0 213 Gene3D G3DSA:3.10.20.400 1 94 2.9E-38 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Tlie_0829 9783fb40d6090b5bcd0543ae2790abb0 213 SUPERFAMILY SSF141734 5 109 2.35E-45 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Tlie_0829 9783fb40d6090b5bcd0543ae2790abb0 213 SUPERFAMILY SSF101386 119 208 8.5E-22 T 14-10-2018 Tlie_0829 9783fb40d6090b5bcd0543ae2790abb0 213 Gene3D G3DSA:1.10.287.1080 117 209 1.0E-26 T 14-10-2018 Tlie_0829 9783fb40d6090b5bcd0543ae2790abb0 213 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 53 103 1.0E-17 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Tlie_0829 9783fb40d6090b5bcd0543ae2790abb0 213 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 103 1.6E-32 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Tlie_0829 9783fb40d6090b5bcd0543ae2790abb0 213 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 120 203 6.3E-28 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Tlie_0154 bb4eec12ad594a2eea318817832f0316 313 SUPERFAMILY SSF53807 31 304 3.43E-79 T 14-10-2018 Tlie_0154 bb4eec12ad594a2eea318817832f0316 313 Gene3D G3DSA:3.40.50.1980 203 305 2.3E-34 T 14-10-2018 Tlie_0154 bb4eec12ad594a2eea318817832f0316 313 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 284 6.9E-60 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Tlie_0154 bb4eec12ad594a2eea318817832f0316 313 Gene3D G3DSA:3.40.50.1980 31 200 1.1E-47 T 14-10-2018 Tlie_0875 e23024eff6ed3f2ec7e9653d0418947b 574 Pfam PF08676 MutL C terminal dimerisation domain 391 527 4.1E-13 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Tlie_0875 e23024eff6ed3f2ec7e9653d0418947b 574 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 119 1.1E-11 T 14-10-2018 Tlie_0875 e23024eff6ed3f2ec7e9653d0418947b 574 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site Tlie_0875 e23024eff6ed3f2ec7e9653d0418947b 574 Gene3D G3DSA:3.30.565.10 3 214 3.9E-59 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0875 e23024eff6ed3f2ec7e9653d0418947b 574 Gene3D G3DSA:2.30.42.20 393 573 3.9E-32 T 14-10-2018 Tlie_0875 e23024eff6ed3f2ec7e9653d0418947b 574 Gene3D G3DSA:3.30.1370.100 434 524 3.9E-32 T 14-10-2018 Tlie_0875 e23024eff6ed3f2ec7e9653d0418947b 574 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 571 20.309 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 Tlie_0875 e23024eff6ed3f2ec7e9653d0418947b 574 SUPERFAMILY SSF55874 3 210 2.62E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0875 e23024eff6ed3f2ec7e9653d0418947b 574 Gene3D G3DSA:3.30.230.10 224 329 2.0E-14 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tlie_0875 e23024eff6ed3f2ec7e9653d0418947b 574 SUPERFAMILY SSF118116 390 573 3.27E-29 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily Tlie_0875 e23024eff6ed3f2ec7e9653d0418947b 574 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 242 320 2.5E-14 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Tlie_0875 e23024eff6ed3f2ec7e9653d0418947b 574 SMART SM01340 208 321 6.7E-8 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Tlie_0875 e23024eff6ed3f2ec7e9653d0418947b 574 SMART SM00853 392 531 8.5E-14 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Tlie_0875 e23024eff6ed3f2ec7e9653d0418947b 574 SUPERFAMILY SSF54211 227 320 2.16E-12 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_0552 23b985430b356cad664521e748985e05 369 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 10 365 5.1E-73 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 Tlie_0552 23b985430b356cad664521e748985e05 369 Pfam PF03739 Predicted permease YjgP/YjgQ family 13 364 3.1E-91 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Tlie_0037 543041234653349cfa1d0cc0dcfa68cc 238 Gene3D G3DSA:1.20.58.220 8 114 6.0E-31 T 14-10-2018 IPR038078 PhoU-like domain superfamily Tlie_0037 543041234653349cfa1d0cc0dcfa68cc 238 SUPERFAMILY SSF109755 8 222 1.15E-66 T 14-10-2018 Tlie_0037 543041234653349cfa1d0cc0dcfa68cc 238 Gene3D G3DSA:1.20.58.220 115 234 1.0E-40 T 14-10-2018 IPR038078 PhoU-like domain superfamily Tlie_0037 543041234653349cfa1d0cc0dcfa68cc 238 Pfam PF01895 PhoU domain 23 109 4.3E-19 T 14-10-2018 IPR026022 PhoU domain Tlie_0037 543041234653349cfa1d0cc0dcfa68cc 238 Pfam PF01895 PhoU domain 125 209 6.5E-23 T 14-10-2018 IPR026022 PhoU domain Tlie_0037 543041234653349cfa1d0cc0dcfa68cc 238 PIRSF PIRSF003107 5 223 7.7E-68 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Tlie_0037 543041234653349cfa1d0cc0dcfa68cc 238 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 9 219 2.2E-65 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Tlie_1313 29b6cdc783c4117c321c17a947116f0f 529 Pfam PF00266 Aminotransferase class-V 156 300 1.5E-7 T 14-10-2018 IPR000192 Aminotransferase class V domain Tlie_1313 29b6cdc783c4117c321c17a947116f0f 529 Gene3D G3DSA:3.40.640.10 100 371 1.1E-72 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1313 29b6cdc783c4117c321c17a947116f0f 529 SUPERFAMILY SSF53383 41 499 1.57E-86 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 Gene3D G3DSA:3.40.50.300 4 189 8.5E-76 T 14-10-2018 Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 Gene3D G3DSA:3.30.70.2570 484 558 7.8E-32 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 SUPERFAMILY SSF50447 169 292 1.77E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 Hamap MF_00071 Elongation factor 4 [lepA]. 1 602 287.279 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 PRINTS PR00315 GTP-binding elongation factor signature 10 23 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 PRINTS PR00315 GTP-binding elongation factor signature 53 61 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 Pfam PF03144 Elongation factor Tu domain 2 209 279 1.9E-11 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 SUPERFAMILY SSF52540 5 209 5.44E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 178 1.6E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 Gene3D G3DSA:2.40.30.10 190 289 3.6E-37 T 14-10-2018 Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 SMART SM00838 402 490 0.0056 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 Gene3D G3DSA:3.30.70.870 290 371 1.8E-34 T 14-10-2018 Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 Pfam PF00009 Elongation factor Tu GTP binding domain 7 186 3.5E-55 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 Pfam PF06421 GTP-binding protein LepA C-terminus 493 598 6.3E-49 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 Gene3D G3DSA:3.30.70.3380 372 482 1.2E-38 T 14-10-2018 Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 SUPERFAMILY SSF54980 296 374 1.26E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 Pfam PF00679 Elongation factor G C-terminus 403 490 4.9E-22 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 TIGRFAM TIGR01393 lepA: elongation factor 4 7 600 1.8E-298 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 Tlie_1143 edc482ae7ce8d8d3688485c2c8ddccbb 605 SUPERFAMILY SSF54980 403 498 4.08E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like Tlie_0963 5ad1519e1ef2475544d843e6495de9fe 193 Gene3D G3DSA:3.30.2320.30 81 191 2.1E-14 T 14-10-2018 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0963 5ad1519e1ef2475544d843e6495de9fe 193 Hamap MF_00311 V-type proton ATPase subunit E [atpE]. 1 192 11.132 T 14-10-2018 IPR002842 V-type ATPase subunit E GO:0015991|GO:0033178|GO:0046961 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0963 5ad1519e1ef2475544d843e6495de9fe 193 Pfam PF01991 ATP synthase (E/31 kDa) subunit 9 191 2.2E-11 T 14-10-2018 IPR002842 V-type ATPase subunit E GO:0015991|GO:0033178|GO:0046961 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0963 5ad1519e1ef2475544d843e6495de9fe 193 SUPERFAMILY SSF160527 82 191 7.06E-17 T 14-10-2018 Tlie_0797 d00ccb7b566bebfea45b16070b9edec0 190 SUPERFAMILY SSF109604 18 133 5.02E-19 T 14-10-2018 Tlie_0797 d00ccb7b566bebfea45b16070b9edec0 190 Gene3D G3DSA:1.10.3210.10 2 156 1.6E-11 T 14-10-2018 Tlie_0797 d00ccb7b566bebfea45b16070b9edec0 190 TIGRFAM TIGR00277 HDIG: HDIG domain 17 90 3.7E-14 T 14-10-2018 IPR006675 HDIG domain Tlie_0797 d00ccb7b566bebfea45b16070b9edec0 190 Pfam PF01966 HD domain 22 91 5.9E-8 T 14-10-2018 IPR006674 HD domain Tlie_0707 20a74bbb1c7bab2fbb4a17c7cacd82c7 451 Pfam PF00665 Integrase core domain 143 271 2.7E-9 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tlie_0707 20a74bbb1c7bab2fbb4a17c7cacd82c7 451 SUPERFAMILY SSF53098 143 303 7.28E-16 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_0707 20a74bbb1c7bab2fbb4a17c7cacd82c7 451 Gene3D G3DSA:3.30.420.10 129 314 1.7E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tlie_0707 20a74bbb1c7bab2fbb4a17c7cacd82c7 451 SUPERFAMILY SSF46689 14 118 2.15E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0707 20a74bbb1c7bab2fbb4a17c7cacd82c7 451 Pfam PF13518 Helix-turn-helix domain 18 66 5.6E-7 T 14-10-2018 Tlie_1385 929a208df48f34d2072f6e301573617a 387 SUPERFAMILY SSF53098 178 330 1.0E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_1385 929a208df48f34d2072f6e301573617a 387 SUPERFAMILY SSF46689 20 121 6.09E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_1905 48465d0b06748566fea949e6fb6bba45 318 SUPERFAMILY SSF52402 39 246 1.76E-39 T 14-10-2018 Tlie_1905 48465d0b06748566fea949e6fb6bba45 318 PIRSF PIRSF004976 12 315 1.8E-71 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 Tlie_1905 48465d0b06748566fea949e6fb6bba45 318 Pfam PF01171 PP-loop family 63 234 2.2E-14 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Tlie_1905 48465d0b06748566fea949e6fb6bba45 318 Gene3D G3DSA:3.40.50.620 15 317 1.1E-68 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1352 96edc043983fab70ddf1617930f27bb6 342 SUPERFAMILY SSF55781 71 334 4.9E-39 T 14-10-2018 Tlie_1352 96edc043983fab70ddf1617930f27bb6 342 Gene3D G3DSA:3.30.450.40 107 333 6.0E-29 T 14-10-2018 IPR029016 GAF-like domain superfamily Tlie_1352 96edc043983fab70ddf1617930f27bb6 342 SUPERFAMILY SSF46785 1 80 2.77E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1352 96edc043983fab70ddf1617930f27bb6 342 Pfam PF01628 HrcA protein C terminal domain 104 322 2.5E-44 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 Tlie_1352 96edc043983fab70ddf1617930f27bb6 342 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 333 4.7E-76 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Tlie_1352 96edc043983fab70ddf1617930f27bb6 342 Gene3D G3DSA:3.30.390.60 128 228 6.0E-29 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Tlie_1352 96edc043983fab70ddf1617930f27bb6 342 Gene3D G3DSA:1.10.10.10 1 84 8.9E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1352 96edc043983fab70ddf1617930f27bb6 342 PIRSF PIRSF005485 1 339 7.0E-83 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Tlie_1352 96edc043983fab70ddf1617930f27bb6 342 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 329 24.312 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Tlie_0414 5e5bd3f2d508cb4c7a19c5f5eba7ddbe 468 Gene3D G3DSA:1.10.3080.10 19 415 4.3E-69 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Tlie_0414 5e5bd3f2d508cb4c7a19c5f5eba7ddbe 468 SUPERFAMILY SSF81340 18 412 6.28E-85 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Tlie_0414 5e5bd3f2d508cb4c7a19c5f5eba7ddbe 468 Pfam PF00654 Voltage gated chloride channel 68 400 1.2E-67 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Tlie_0414 5e5bd3f2d508cb4c7a19c5f5eba7ddbe 468 PRINTS PR00762 Chloride channel signature 351 367 2.9E-12 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Tlie_0414 5e5bd3f2d508cb4c7a19c5f5eba7ddbe 468 PRINTS PR00762 Chloride channel signature 161 180 2.9E-12 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Tlie_0414 5e5bd3f2d508cb4c7a19c5f5eba7ddbe 468 PRINTS PR00762 Chloride channel signature 110 129 2.9E-12 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Tlie_1893 2bbc5d6b9208160abed140b4b701d6e5 503 SUPERFAMILY SSF100950 5 224 2.09E-72 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Tlie_1893 2bbc5d6b9208160abed140b4b701d6e5 503 Gene3D G3DSA:3.40.1080.20 338 480 6.5E-44 T 14-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily Tlie_1893 2bbc5d6b9208160abed140b4b701d6e5 503 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 12 217 2.1E-35 T 14-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 Tlie_1893 2bbc5d6b9208160abed140b4b701d6e5 503 Gene3D G3DSA:3.30.750.70 255 320 1.2E-5 T 14-10-2018 Tlie_1893 2bbc5d6b9208160abed140b4b701d6e5 503 Gene3D G3DSA:3.40.1080.10 9 173 3.7E-16 T 14-10-2018 Tlie_1893 2bbc5d6b9208160abed140b4b701d6e5 503 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 12 498 1.9E-227 T 14-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 Tlie_1893 2bbc5d6b9208160abed140b4b701d6e5 503 SUPERFAMILY SSF100950 227 499 7.96E-82 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Tlie_1893 2bbc5d6b9208160abed140b4b701d6e5 503 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 322 465 1.5E-45 T 14-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain Tlie_1183 b6fdab8af4a2a764ce009fc79de7ce4c 197 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tlie_1183 b6fdab8af4a2a764ce009fc79de7ce4c 197 Pfam PF00889 Elongation factor TS 27 197 1.7E-42 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Tlie_1183 b6fdab8af4a2a764ce009fc79de7ce4c 197 SUPERFAMILY SSF54713 56 197 2.62E-53 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Tlie_1183 b6fdab8af4a2a764ce009fc79de7ce4c 197 Gene3D G3DSA:1.10.8.10 1 55 4.7E-25 T 14-10-2018 Tlie_1183 b6fdab8af4a2a764ce009fc79de7ce4c 197 Gene3D G3DSA:1.10.286.20 111 155 7.4E-59 T 14-10-2018 Tlie_1183 b6fdab8af4a2a764ce009fc79de7ce4c 197 Gene3D G3DSA:3.30.479.20 59 196 7.4E-59 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Tlie_1183 b6fdab8af4a2a764ce009fc79de7ce4c 197 Hamap MF_00050 Elongation factor Ts [tsf]. 1 197 48.102 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tlie_1183 b6fdab8af4a2a764ce009fc79de7ce4c 197 ProSitePatterns PS01127 Elongation factor Ts signature 2. 76 86 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tlie_1183 b6fdab8af4a2a764ce009fc79de7ce4c 197 SUPERFAMILY SSF46934 1 55 2.32E-19 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 Tlie_1183 b6fdab8af4a2a764ce009fc79de7ce4c 197 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 96 1.3E-36 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tlie_0817 4e0a3d7a203af9e277b9913d4cd2d18d 210 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 4 180 1.9E-49 T 14-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Tlie_0817 4e0a3d7a203af9e277b9913d4cd2d18d 210 SUPERFAMILY SSF53254 1 197 1.73E-60 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Tlie_0817 4e0a3d7a203af9e277b9913d4cd2d18d 210 Gene3D G3DSA:3.40.50.1240 1 200 2.6E-65 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Tlie_0817 4e0a3d7a203af9e277b9913d4cd2d18d 210 PIRSF PIRSF000709 2 192 7.0E-21 T 14-10-2018 Tlie_0817 4e0a3d7a203af9e277b9913d4cd2d18d 210 SMART SM00855 2 155 3.5E-23 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tlie_0817 4e0a3d7a203af9e277b9913d4cd2d18d 210 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 190 4.6E-62 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tlie_1447 32838b76a4462412e8f94bb5f62a14d7 152 SMART SM00116 96 143 5.0E-4 T 14-10-2018 IPR000644 CBS domain Tlie_1447 32838b76a4462412e8f94bb5f62a14d7 152 SMART SM00116 10 58 1.7E-10 T 14-10-2018 IPR000644 CBS domain Tlie_1447 32838b76a4462412e8f94bb5f62a14d7 152 SUPERFAMILY SSF54631 1 142 1.15E-33 T 14-10-2018 Tlie_1447 32838b76a4462412e8f94bb5f62a14d7 152 Gene3D G3DSA:3.10.580.10 1 151 1.7E-32 T 14-10-2018 Tlie_1447 32838b76a4462412e8f94bb5f62a14d7 152 Pfam PF00571 CBS domain 89 143 2.3E-7 T 14-10-2018 IPR000644 CBS domain Tlie_1447 32838b76a4462412e8f94bb5f62a14d7 152 Pfam PF00571 CBS domain 3 57 4.2E-13 T 14-10-2018 IPR000644 CBS domain Tlie_0975 a39d74f9370d81a2b62c2ad995e33829 323 ProSitePatterns PS01348 MraY family signature 2. 165 176 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tlie_0975 a39d74f9370d81a2b62c2ad995e33829 323 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 50 62 7.1E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tlie_0975 a39d74f9370d81a2b62c2ad995e33829 323 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 20 314 3.5E-63 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tlie_0975 a39d74f9370d81a2b62c2ad995e33829 323 ProSitePatterns PS01347 MraY family signature 1. 50 62 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tlie_0975 a39d74f9370d81a2b62c2ad995e33829 323 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 6 317 18.582 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tlie_0975 a39d74f9370d81a2b62c2ad995e33829 323 Pfam PF00953 Glycosyl transferase family 4 90 243 1.7E-32 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Tlie_1733 b1d7f51210ba37c22ed6903c3d632314 420 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 223 239 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tlie_1733 b1d7f51210ba37c22ed6903c3d632314 420 Gene3D G3DSA:3.40.640.10 38 288 2.0E-187 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1733 b1d7f51210ba37c22ed6903c3d632314 420 SUPERFAMILY SSF53383 7 417 4.17E-184 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1733 b1d7f51210ba37c22ed6903c3d632314 420 PIRSF PIRSF000412 4 419 3.6E-171 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tlie_1733 b1d7f51210ba37c22ed6903c3d632314 420 Gene3D G3DSA:3.90.1150.10 11 393 2.0E-187 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1733 b1d7f51210ba37c22ed6903c3d632314 420 Pfam PF00464 Serine hydroxymethyltransferase 10 384 5.3E-173 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tlie_1733 b1d7f51210ba37c22ed6903c3d632314 420 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 8 416 54.305 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tlie_1590 ef422e03ffe25e5773293789431dfcee 471 Gene3D G3DSA:3.30.465.10 104 224 9.1E-40 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Tlie_1590 ef422e03ffe25e5773293789431dfcee 471 Gene3D G3DSA:1.10.45.10 430 470 1.1E-11 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Tlie_1590 ef422e03ffe25e5773293789431dfcee 471 Gene3D G3DSA:3.30.70.2190 229 343 6.7E-7 T 14-10-2018 Tlie_1590 ef422e03ffe25e5773293789431dfcee 471 SUPERFAMILY SSF56176 9 225 1.26E-67 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Tlie_1590 ef422e03ffe25e5773293789431dfcee 471 Pfam PF02913 FAD linked oxidases, C-terminal domain 227 469 1.1E-59 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Tlie_1590 ef422e03ffe25e5773293789431dfcee 471 Pfam PF01565 FAD binding domain 51 188 2.9E-38 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Tlie_1590 ef422e03ffe25e5773293789431dfcee 471 Gene3D G3DSA:3.30.70.2740 348 429 3.2E-16 T 14-10-2018 Tlie_1590 ef422e03ffe25e5773293789431dfcee 471 Gene3D G3DSA:3.30.43.10 2 102 2.5E-27 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Tlie_1590 ef422e03ffe25e5773293789431dfcee 471 SUPERFAMILY SSF55103 232 470 1.6E-59 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Tlie_0057 1f3937661aaf20a2fe4b32460fe6f51b 201 Pfam PF09335 SNARE associated Golgi protein 34 160 1.6E-22 T 14-10-2018 IPR032816 SNARE associated Golgi protein Tlie_0927 bde3a5a32baf4950acc83f57640901b6 330 SUPERFAMILY SSF64182 19 304 8.89E-53 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily Tlie_0927 bde3a5a32baf4950acc83f57640901b6 330 Gene3D G3DSA:3.90.1640.10 1 201 3.2E-44 T 14-10-2018 Tlie_0927 bde3a5a32baf4950acc83f57640901b6 330 Pfam PF02272 DHHA1 domain 238 314 9.8E-10 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Tlie_0927 bde3a5a32baf4950acc83f57640901b6 330 Pfam PF01368 DHH family 19 159 5.8E-8 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tlie_0927 bde3a5a32baf4950acc83f57640901b6 330 Gene3D G3DSA:3.10.310.30 204 324 8.5E-29 T 14-10-2018 Tlie_1267 d3e547558251badafdfb54efcff5d227 634 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 126 132 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tlie_1267 d3e547558251badafdfb54efcff5d227 634 SUPERFAMILY SSF53335 91 442 1.69E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_1267 d3e547558251badafdfb54efcff5d227 634 Pfam PF01555 DNA methylase 123 426 2.1E-37 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Tlie_1267 d3e547558251badafdfb54efcff5d227 634 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 123 135 3.1E-15 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tlie_1267 d3e547558251badafdfb54efcff5d227 634 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 384 406 3.1E-15 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tlie_1267 d3e547558251badafdfb54efcff5d227 634 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 186 205 3.1E-15 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tlie_1267 d3e547558251badafdfb54efcff5d227 634 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 407 421 3.1E-15 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tlie_1267 d3e547558251badafdfb54efcff5d227 634 PIRSF PIRSF015855 3 633 1.6E-185 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tlie_1353 457765bb203ef033b535e4b83c17f8f3 451 Pfam PF00665 Integrase core domain 143 271 3.6E-9 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tlie_1353 457765bb203ef033b535e4b83c17f8f3 451 SUPERFAMILY SSF46689 14 118 1.72E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_1353 457765bb203ef033b535e4b83c17f8f3 451 Gene3D G3DSA:3.30.420.10 129 314 4.3E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tlie_1353 457765bb203ef033b535e4b83c17f8f3 451 SUPERFAMILY SSF53098 143 303 1.31E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_1353 457765bb203ef033b535e4b83c17f8f3 451 Pfam PF13518 Helix-turn-helix domain 18 66 4.0E-7 T 14-10-2018 Tlie_0293 8e2a5f0af5ceb5f03d80290eb8a20f0d 254 Gene3D G3DSA:3.20.20.60 1 254 4.7E-81 T 14-10-2018 Tlie_0293 8e2a5f0af5ceb5f03d80290eb8a20f0d 254 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 235 2.9E-33 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Tlie_0293 8e2a5f0af5ceb5f03d80290eb8a20f0d 254 SUPERFAMILY SSF51621 2 251 1.43E-70 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tlie_1812 93e2e39119839ee8e407fb9357bb51b2 409 Gene3D G3DSA:3.40.50.2000 13 219 5.3E-29 T 14-10-2018 Tlie_1812 93e2e39119839ee8e407fb9357bb51b2 409 Gene3D G3DSA:3.40.50.2000 220 390 8.0E-21 T 14-10-2018 Tlie_1812 93e2e39119839ee8e407fb9357bb51b2 409 Pfam PF13439 Glycosyltransferase Family 4 22 208 9.0E-23 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tlie_1812 93e2e39119839ee8e407fb9357bb51b2 409 Pfam PF13692 Glycosyl transferases group 1 224 368 3.9E-10 T 14-10-2018 Tlie_1812 93e2e39119839ee8e407fb9357bb51b2 409 SUPERFAMILY SSF53756 21 407 1.73E-52 T 14-10-2018 Tlie_0354 4757ddf3755fc581a36b48667d27b6c5 116 SUPERFAMILY SSF51182 30 113 1.43E-21 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Tlie_0354 4757ddf3755fc581a36b48667d27b6c5 116 Gene3D G3DSA:2.60.120.10 2 115 3.5E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Tlie_0354 4757ddf3755fc581a36b48667d27b6c5 116 Pfam PF07883 Cupin domain 46 113 2.3E-17 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Tlie_0089 fd40a8bed9eb6ae5bdfd909d3bcd0d17 135 PIRSF PIRSF002889 3 135 1.4E-31 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Tlie_0089 fd40a8bed9eb6ae5bdfd909d3bcd0d17 135 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 90 132 5.1E-5 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tlie_0089 fd40a8bed9eb6ae5bdfd909d3bcd0d17 135 Pfam PF00460 Flagella basal body rod protein 16 37 1.1E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tlie_0089 fd40a8bed9eb6ae5bdfd909d3bcd0d17 135 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 18 132 9.1E-25 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Tlie_0970 47652e2e097a304f4f2b966a4ec383ab 303 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 293 4.5E-84 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Tlie_0970 47652e2e097a304f4f2b966a4ec383ab 303 Gene3D G3DSA:1.10.150.170 111 218 5.8E-98 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Tlie_0970 47652e2e097a304f4f2b966a4ec383ab 303 PIRSF PIRSF004486 1 295 2.6E-95 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Tlie_0970 47652e2e097a304f4f2b966a4ec383ab 303 SUPERFAMILY SSF53335 4 293 1.48E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_0970 47652e2e097a304f4f2b966a4ec383ab 303 Pfam PF01795 MraW methylase family 2 293 2.5E-94 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Tlie_0970 47652e2e097a304f4f2b966a4ec383ab 303 SUPERFAMILY SSF81799 112 215 8.5E-32 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Tlie_0970 47652e2e097a304f4f2b966a4ec383ab 303 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 297 33.686 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Tlie_0970 47652e2e097a304f4f2b966a4ec383ab 303 Gene3D G3DSA:3.40.50.150 4 293 5.8E-98 T 14-10-2018 Tlie_1185 25040ea262320c1b1264cd4b61806e30 109 Gene3D G3DSA:1.20.58.1000 14 95 2.0E-24 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Tlie_1185 25040ea262320c1b1264cd4b61806e30 109 Pfam PF02583 Metal-sensitive transcriptional repressor 16 90 5.0E-25 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 Pfam PF00158 Sigma-54 interaction domain 139 304 4.8E-63 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 Gene3D G3DSA:3.40.50.2300 3 122 4.5E-27 T 14-10-2018 Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 SUPERFAMILY SSF46689 384 452 8.24E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 Pfam PF00072 Response regulator receiver domain 6 114 1.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 SMART SM00448 2 114 4.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 Gene3D G3DSA:3.40.50.300 124 308 4.5E-58 T 14-10-2018 Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 Pfam PF02954 Bacterial regulatory protein, Fis family 409 449 3.8E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 SMART SM00382 159 300 4.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 Gene3D G3DSA:1.10.8.60 309 374 4.1E-19 T 14-10-2018 Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 SUPERFAMILY SSF52540 137 382 2.32E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 SUPERFAMILY SSF52172 1 183 1.1E-33 T 14-10-2018 IPR011006 CheY-like superfamily Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 Gene3D G3DSA:1.10.10.60 379 452 1.1E-18 T 14-10-2018 Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 452 6.6E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tlie_0283 e7dd9201fa616f5b7e4dacb9fd46b032 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 415 432 6.6E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 4.3E-24 T 14-10-2018 Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 4.3E-24 T 14-10-2018 Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 4.3E-24 T 14-10-2018 Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 4.3E-24 T 14-10-2018 Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 4.3E-24 T 14-10-2018 Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 Gene3D G3DSA:3.50.50.60 120 448 1.0E-166 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 Pfam PF00581 Rhodanese-like domain 463 555 3.7E-10 T 14-10-2018 IPR001763 Rhodanese-like domain Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 Gene3D G3DSA:3.50.50.60 2 348 1.0E-166 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 299 1.1E-60 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 SUPERFAMILY SSF52821 459 555 1.44E-20 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 341 441 1.1E-15 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 4.4E-14 T 14-10-2018 Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 183 4.4E-14 T 14-10-2018 Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 258 4.4E-14 T 14-10-2018 Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 395 410 4.4E-14 T 14-10-2018 Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 285 292 4.4E-14 T 14-10-2018 Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 SUPERFAMILY SSF51905 1 324 1.94E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 SMART SM00450 463 561 2.6E-8 T 14-10-2018 IPR001763 Rhodanese-like domain Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 Gene3D G3DSA:3.40.250.10 463 562 8.7E-19 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Tlie_1656 09cb89d935c80c8d94bd21957bd4b0f4 562 SUPERFAMILY SSF55424 331 454 1.89E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 165 727 5.3E-164 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 SUPERFAMILY SSF81665 154 440 5.75E-12 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 SUPERFAMILY SSF56784 445 726 1.0E-57 T 14-10-2018 IPR036412 HAD-like superfamily Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 Gene3D G3DSA:2.70.150.20 219 331 2.2E-37 T 14-10-2018 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 447 461 1.8E-26 T 14-10-2018 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 645 1.8E-26 T 14-10-2018 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 573 583 1.8E-26 T 14-10-2018 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 649 661 1.8E-26 T 14-10-2018 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 276 290 1.8E-26 T 14-10-2018 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 551 562 1.8E-26 T 14-10-2018 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 Gene3D G3DSA:3.40.50.1000 428 678 1.2E-71 T 14-10-2018 IPR023214 HAD superfamily Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 SUPERFAMILY SSF81653 230 326 1.02E-26 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 Pfam PF00702 haloacid dehalogenase-like hydrolase 445 640 6.1E-37 T 14-10-2018 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 Gene3D G3DSA:3.40.1110.10 458 558 1.2E-71 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 198 380 2.4E-21 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 391 715 7.5E-64 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 SUPERFAMILY SSF55008 19 91 2.75E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 449 455 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 ProSitePatterns PS01047 Heavy-metal-associated domain. 27 56 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 Gene3D G3DSA:3.30.70.100 10 95 1.1E-18 T 14-10-2018 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 598 614 2.7E-12 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 626 642 2.7E-12 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 657 682 2.7E-12 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 Pfam PF00403 Heavy-metal-associated domain 25 84 1.8E-12 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Tlie_1360 129e5451ed73571d55f1cadc77c22694 735 Pfam PF00122 E1-E2 ATPase 226 424 5.1E-52 T 14-10-2018 Tlie_0834 1595f1446c8e8e75460c1f6734ff9eb9 214 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 210 43.541 T 14-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Tlie_0834 1595f1446c8e8e75460c1f6734ff9eb9 214 Pfam PF01634 ATP phosphoribosyltransferase 49 200 1.2E-43 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Tlie_0834 1595f1446c8e8e75460c1f6734ff9eb9 214 Gene3D G3DSA:3.40.190.10 90 178 5.1E-63 T 14-10-2018 Tlie_0834 1595f1446c8e8e75460c1f6734ff9eb9 214 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 145 166 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 Tlie_0834 1595f1446c8e8e75460c1f6734ff9eb9 214 SUPERFAMILY SSF53850 1 204 1.39E-53 T 14-10-2018 Tlie_0834 1595f1446c8e8e75460c1f6734ff9eb9 214 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 185 2.6E-52 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Tlie_0834 1595f1446c8e8e75460c1f6734ff9eb9 214 Gene3D G3DSA:3.40.190.10 4 194 5.1E-63 T 14-10-2018 Tlie_0470 7fe23103f237930ad02988de633c306f 169 SUPERFAMILY SSF47240 6 156 1.65E-24 T 14-10-2018 IPR009078 Ferritin-like superfamily Tlie_0470 7fe23103f237930ad02988de633c306f 169 Pfam PF02915 Rubrerythrin 6 150 3.9E-14 T 14-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Tlie_0470 7fe23103f237930ad02988de633c306f 169 Gene3D G3DSA:1.20.1260.10 1 157 6.2E-30 T 14-10-2018 IPR012347 Ferritin-like Tlie_1802 bf81c7170f9eac03e95197608817e8c7 291 PIRSF PIRSF029271 1 291 3.3E-154 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tlie_1802 bf81c7170f9eac03e95197608817e8c7 291 SUPERFAMILY SSF51366 17 263 2.82E-68 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tlie_1802 bf81c7170f9eac03e95197608817e8c7 291 Pfam PF01680 SOR/SNZ family 6 211 1.5E-109 T 14-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tlie_1802 bf81c7170f9eac03e95197608817e8c7 291 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 8 291 2.4E-147 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tlie_1802 bf81c7170f9eac03e95197608817e8c7 291 Gene3D G3DSA:3.20.20.70 1 291 7.5E-151 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1802 bf81c7170f9eac03e95197608817e8c7 291 ProSitePatterns PS01235 PdxS/SNZ family signature. 204 222 - T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tlie_1802 bf81c7170f9eac03e95197608817e8c7 291 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 3 291 53.81 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tlie_1854 62e3eca48ca45ba7e952102fd4a1b571 433 Pfam PF00989 PAS fold 146 240 9.5E-10 T 14-10-2018 IPR013767 PAS fold GO:0006355 Tlie_1854 62e3eca48ca45ba7e952102fd4a1b571 433 SMART SM00267 263 431 2.7E-62 T 14-10-2018 IPR000160 GGDEF domain Tlie_1854 62e3eca48ca45ba7e952102fd4a1b571 433 Gene3D G3DSA:3.40.50.2300 13 135 2.4E-21 T 14-10-2018 Tlie_1854 62e3eca48ca45ba7e952102fd4a1b571 433 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 270 4.7E-18 T 14-10-2018 IPR000014 PAS domain Tlie_1854 62e3eca48ca45ba7e952102fd4a1b571 433 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 273 430 9.7E-54 T 14-10-2018 IPR000160 GGDEF domain Tlie_1854 62e3eca48ca45ba7e952102fd4a1b571 433 SUPERFAMILY SSF55785 132 261 9.95E-16 T 14-10-2018 IPR035965 PAS domain superfamily Tlie_1854 62e3eca48ca45ba7e952102fd4a1b571 433 Gene3D G3DSA:3.30.70.270 265 431 8.0E-58 T 14-10-2018 Tlie_1854 62e3eca48ca45ba7e952102fd4a1b571 433 Pfam PF00072 Response regulator receiver domain 16 124 1.5E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_1854 62e3eca48ca45ba7e952102fd4a1b571 433 Gene3D G3DSA:3.30.450.20 136 264 2.2E-20 T 14-10-2018 Tlie_1854 62e3eca48ca45ba7e952102fd4a1b571 433 SMART SM00448 14 126 8.5E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_1854 62e3eca48ca45ba7e952102fd4a1b571 433 Pfam PF00990 Diguanylate cyclase, GGDEF domain 275 426 1.5E-45 T 14-10-2018 IPR000160 GGDEF domain Tlie_1854 62e3eca48ca45ba7e952102fd4a1b571 433 SUPERFAMILY SSF55073 279 430 6.83E-48 T 14-10-2018 IPR029787 Nucleotide cyclase Tlie_1854 62e3eca48ca45ba7e952102fd4a1b571 433 SUPERFAMILY SSF52172 15 147 2.28E-23 T 14-10-2018 IPR011006 CheY-like superfamily Tlie_1854 62e3eca48ca45ba7e952102fd4a1b571 433 SMART SM00091 144 211 8.9E-11 T 14-10-2018 IPR000014 PAS domain Tlie_0149 f845eb5ab7e5a2870244144bdc90de20 349 Pfam PF02277 Phosphoribosyltransferase 9 344 4.1E-141 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tlie_0149 f845eb5ab7e5a2870244144bdc90de20 349 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 13 344 4.8E-140 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tlie_0149 f845eb5ab7e5a2870244144bdc90de20 349 SUPERFAMILY SSF52733 3 345 2.75E-124 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tlie_0149 f845eb5ab7e5a2870244144bdc90de20 349 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 11 346 37.038 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tlie_0149 f845eb5ab7e5a2870244144bdc90de20 349 Gene3D G3DSA:3.40.50.10210 55 327 8.9E-140 T 14-10-2018 Tlie_0149 f845eb5ab7e5a2870244144bdc90de20 349 Gene3D G3DSA:1.10.1610.10 9 334 8.9E-140 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tlie_0763 2f91b886a990c77b4a4ae0c574f678d1 610 SUPERFAMILY SSF56235 2 236 1.97E-69 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tlie_0763 2f91b886a990c77b4a4ae0c574f678d1 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.4E-242 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Tlie_0763 2f91b886a990c77b4a4ae0c574f678d1 610 Pfam PF01380 SIS domain 293 414 1.5E-24 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Tlie_0763 2f91b886a990c77b4a4ae0c574f678d1 610 Pfam PF01380 SIS domain 465 590 2.3E-23 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Tlie_0763 2f91b886a990c77b4a4ae0c574f678d1 610 Gene3D G3DSA:3.40.50.10490 249 609 6.2E-139 T 14-10-2018 Tlie_0763 2f91b886a990c77b4a4ae0c574f678d1 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 38.943 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Tlie_0763 2f91b886a990c77b4a4ae0c574f678d1 610 Gene3D G3DSA:3.40.50.10490 448 595 6.2E-139 T 14-10-2018 Tlie_0763 2f91b886a990c77b4a4ae0c574f678d1 610 SUPERFAMILY SSF53697 246 610 1.39E-101 T 14-10-2018 Tlie_0763 2f91b886a990c77b4a4ae0c574f678d1 610 Gene3D G3DSA:3.60.20.10 2 242 3.1E-75 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tlie_0763 2f91b886a990c77b4a4ae0c574f678d1 610 Pfam PF13522 Glutamine amidotransferase domain 55 193 5.7E-21 T 14-10-2018 Tlie_1626 9c57bdc3d6d26e9d5fa0f7ac792c9bcf 444 Gene3D G3DSA:3.20.20.20 367 437 1.8E-10 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tlie_1626 9c57bdc3d6d26e9d5fa0f7ac792c9bcf 444 Pfam PF13237 4Fe-4S dicluster domain 5 51 2.4E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_1626 9c57bdc3d6d26e9d5fa0f7ac792c9bcf 444 Pfam PF04060 Putative Fe-S cluster 376 408 4.5E-12 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 Tlie_1626 9c57bdc3d6d26e9d5fa0f7ac792c9bcf 444 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 90 302 2.0E-24 T 14-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal Tlie_1626 9c57bdc3d6d26e9d5fa0f7ac792c9bcf 444 SUPERFAMILY SSF53920 40 304 2.88E-31 T 14-10-2018 IPR009016 Iron hydrogenase Tlie_1626 9c57bdc3d6d26e9d5fa0f7ac792c9bcf 444 SUPERFAMILY SSF54862 7 61 1.68E-15 T 14-10-2018 Tlie_1626 9c57bdc3d6d26e9d5fa0f7ac792c9bcf 444 Gene3D G3DSA:3.30.70.20 6 71 2.4E-12 T 14-10-2018 Tlie_1626 9c57bdc3d6d26e9d5fa0f7ac792c9bcf 444 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 12 23 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_1626 9c57bdc3d6d26e9d5fa0f7ac792c9bcf 444 Gene3D G3DSA:3.40.950.20 111 340 3.4E-18 T 14-10-2018 Tlie_1187 510f3a7c8d4766d692d2087d2243fb19 151 SUPERFAMILY SSF53927 6 149 7.36E-55 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tlie_1187 510f3a7c8d4766d692d2087d2243fb19 151 Gene3D G3DSA:3.40.140.10 2 151 3.0E-61 T 14-10-2018 Tlie_1187 510f3a7c8d4766d692d2087d2243fb19 151 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 9 150 45.641 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Tlie_1187 510f3a7c8d4766d692d2087d2243fb19 151 Pfam PF14437 MafB19-like deaminase 6 150 1.3E-34 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Tlie_1187 510f3a7c8d4766d692d2087d2243fb19 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 91 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Tlie_0077 c4a0593f6cb78508854e180aad8eb89a 447 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 94 2.9E-4 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0077 c4a0593f6cb78508854e180aad8eb89a 447 Gene3D G3DSA:3.40.50.12240 17 440 7.7E-156 T 14-10-2018 Tlie_0077 c4a0593f6cb78508854e180aad8eb89a 447 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 360 2.9E-77 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0077 c4a0593f6cb78508854e180aad8eb89a 447 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 351 360 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0077 c4a0593f6cb78508854e180aad8eb89a 447 SMART SM00382 163 344 1.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0077 c4a0593f6cb78508854e180aad8eb89a 447 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 26 437 4.3E-200 T 14-10-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0077 c4a0593f6cb78508854e180aad8eb89a 447 SUPERFAMILY SSF52540 98 365 1.15E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0077 c4a0593f6cb78508854e180aad8eb89a 447 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 11 437 7.3E-190 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0613 32308f99b3dcbaa818b9ae7097c8f978 291 Gene3D G3DSA:1.20.1640.10 94 291 2.6E-11 T 14-10-2018 Tlie_0613 32308f99b3dcbaa818b9ae7097c8f978 291 SUPERFAMILY SSF82866 94 287 5.89E-41 T 14-10-2018 Tlie_0613 32308f99b3dcbaa818b9ae7097c8f978 291 Pfam PF02355 Protein export membrane protein 101 285 4.0E-67 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Tlie_0613 32308f99b3dcbaa818b9ae7097c8f978 291 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 90 273 1.4E-54 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tlie_0613 32308f99b3dcbaa818b9ae7097c8f978 291 PRINTS PR01755 Bacterial translocase SecF protein signature 35 50 4.0E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tlie_0613 32308f99b3dcbaa818b9ae7097c8f978 291 PRINTS PR01755 Bacterial translocase SecF protein signature 144 158 4.0E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tlie_0613 32308f99b3dcbaa818b9ae7097c8f978 291 PRINTS PR01755 Bacterial translocase SecF protein signature 224 239 4.0E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tlie_0613 32308f99b3dcbaa818b9ae7097c8f978 291 PRINTS PR01755 Bacterial translocase SecF protein signature 192 210 4.0E-30 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tlie_0613 32308f99b3dcbaa818b9ae7097c8f978 291 Pfam PF07549 SecD/SecF GG Motif 31 52 5.4E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Tlie_0613 32308f99b3dcbaa818b9ae7097c8f978 291 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 8 287 28.361 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Tlie_0613 32308f99b3dcbaa818b9ae7097c8f978 291 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 36 276 1.4E-78 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Tlie_0210 48005b3a6f793c0d2d017ab09add4059 444 SUPERFAMILY SSF142984 159 226 1.57E-12 T 14-10-2018 Tlie_0210 48005b3a6f793c0d2d017ab09add4059 444 Pfam PF10531 SLBB domain 160 206 2.6E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_0210 48005b3a6f793c0d2d017ab09add4059 444 Gene3D G3DSA:3.10.20.600 152 223 1.5E-5 T 14-10-2018 Tlie_0210 48005b3a6f793c0d2d017ab09add4059 444 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 12 147 1.9E-38 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_0210 48005b3a6f793c0d2d017ab09add4059 444 Gene3D G3DSA:3.40.50.11540 16 105 4.6E-14 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_0210 48005b3a6f793c0d2d017ab09add4059 444 SUPERFAMILY SSF142019 3 165 8.37E-41 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_0210 48005b3a6f793c0d2d017ab09add4059 444 PIRSF PIRSF036408 2 441 1.2E-146 T 14-10-2018 IPR017054 Propanediol utilization protein, PduS, predicted Tlie_0210 48005b3a6f793c0d2d017ab09add4059 444 Pfam PF13375 RnfC Barrel sandwich hybrid domain 378 434 4.8E-11 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Tlie_0210 48005b3a6f793c0d2d017ab09add4059 444 SUPERFAMILY SSF46548 226 329 1.03E-10 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tlie_0210 48005b3a6f793c0d2d017ab09add4059 444 Pfam PF13534 4Fe-4S dicluster domain 250 312 7.7E-9 T 14-10-2018 Tlie_0746 3a00776ef4403073196269109807841a 357 SMART SM00937 65 178 4.4E-62 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Tlie_0746 3a00776ef4403073196269109807841a 357 Gene3D G3DSA:3.30.70.1660 111 341 5.3E-102 T 14-10-2018 Tlie_0746 3a00776ef4403073196269109807841a 357 SUPERFAMILY SSF75620 10 352 1.83E-141 T 14-10-2018 Tlie_0746 3a00776ef4403073196269109807841a 357 Pfam PF03462 PCRF domain 11 203 2.4E-77 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Tlie_0746 3a00776ef4403073196269109807841a 357 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 356 41.694 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Tlie_0746 3a00776ef4403073196269109807841a 357 Gene3D G3DSA:3.30.160.20 210 296 5.3E-102 T 14-10-2018 Tlie_0746 3a00776ef4403073196269109807841a 357 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 356 1.1E-170 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Tlie_0746 3a00776ef4403073196269109807841a 357 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 227 243 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Tlie_0746 3a00776ef4403073196269109807841a 357 Pfam PF00472 RF-1 domain 211 320 7.2E-44 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Tlie_0746 3a00776ef4403073196269109807841a 357 Gene3D G3DSA:1.20.58.410 2 102 2.7E-6 T 14-10-2018 Tlie_0849 26a674ec0f970428d2ed469df246e12f 438 Gene3D G3DSA:3.80.30.20 133 369 1.7E-68 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tlie_0849 26a674ec0f970428d2ed469df246e12f 438 SMART SM00729 134 355 1.1E-34 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tlie_0849 26a674ec0f970428d2ed469df246e12f 438 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 138 158 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Tlie_0849 26a674ec0f970428d2ed469df246e12f 438 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 431 1.1E-102 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Tlie_0849 26a674ec0f970428d2ed469df246e12f 438 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 431 1.0E-120 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Tlie_0849 26a674ec0f970428d2ed469df246e12f 438 Gene3D G3DSA:3.40.50.12160 4 128 3.3E-36 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Tlie_0849 26a674ec0f970428d2ed469df246e12f 438 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 4 433 52.684 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Tlie_0849 26a674ec0f970428d2ed469df246e12f 438 Pfam PF04055 Radical SAM superfamily 140 313 9.1E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_0849 26a674ec0f970428d2ed469df246e12f 438 Gene3D G3DSA:2.40.50.140 370 438 9.5E-17 T 14-10-2018 Tlie_0849 26a674ec0f970428d2ed469df246e12f 438 SUPERFAMILY SSF102114 133 364 3.14E-50 T 14-10-2018 Tlie_0849 26a674ec0f970428d2ed469df246e12f 438 Pfam PF00919 Uncharacterized protein family UPF0004 5 102 1.3E-25 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Tlie_0842 e034e28d6791a410752d7894f5879288 376 Gene3D G3DSA:3.40.640.10 2 243 6.9E-86 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0842 e034e28d6791a410752d7894f5879288 376 SUPERFAMILY SSF53383 18 374 1.05E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0842 e034e28d6791a410752d7894f5879288 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 19 371 1.6E-117 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Tlie_0842 e034e28d6791a410752d7894f5879288 376 Gene3D G3DSA:3.90.1150.10 244 375 9.9E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_0842 e034e28d6791a410752d7894f5879288 376 PIRSF PIRSF000390 6 375 2.9E-106 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Tlie_0587 909732af42103360c8e7c97680e8bac2 319 Pfam PF07478 D-ala D-ala ligase C-terminus 110 311 1.1E-52 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0587 909732af42103360c8e7c97680e8bac2 319 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 257 285 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0587 909732af42103360c8e7c97680e8bac2 319 Gene3D G3DSA:3.30.1490.20 117 188 2.0E-72 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tlie_0587 909732af42103360c8e7c97680e8bac2 319 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 8 314 1.5E-85 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0587 909732af42103360c8e7c97680e8bac2 319 SMART SM01209 101 282 0.003 T 14-10-2018 Tlie_0587 909732af42103360c8e7c97680e8bac2 319 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 69 80 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0587 909732af42103360c8e7c97680e8bac2 319 Pfam PF01820 D-ala D-ala ligase N-terminus 8 92 3.2E-19 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0587 909732af42103360c8e7c97680e8bac2 319 Gene3D G3DSA:3.40.50.20 1 90 2.6E-26 T 14-10-2018 Tlie_0587 909732af42103360c8e7c97680e8bac2 319 SUPERFAMILY SSF56059 102 312 6.54E-50 T 14-10-2018 Tlie_0587 909732af42103360c8e7c97680e8bac2 319 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 7 315 33.588 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0587 909732af42103360c8e7c97680e8bac2 319 SUPERFAMILY SSF52440 7 102 2.11E-24 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tlie_0587 909732af42103360c8e7c97680e8bac2 319 PIRSF PIRSF039102 4 52 1.8E-8 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0587 909732af42103360c8e7c97680e8bac2 319 PIRSF PIRSF039102 47 319 5.2E-80 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0587 909732af42103360c8e7c97680e8bac2 319 Gene3D G3DSA:3.30.470.20 91 311 2.0E-72 T 14-10-2018 Tlie_0608 5dfe7e537b75585b821bf9af83b720ec 92 SUPERFAMILY SSF55174 1 72 4.97E-20 T 14-10-2018 Tlie_0608 5dfe7e537b75585b821bf9af83b720ec 92 SMART SM00363 1 69 2.1E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0608 5dfe7e537b75585b821bf9af83b720ec 92 PIRSF PIRSF038881 1 87 2.3E-26 T 14-10-2018 IPR025490 RNA-binding protein, HP1423 type Tlie_0608 5dfe7e537b75585b821bf9af83b720ec 92 Pfam PF01479 S4 domain 1 47 5.4E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0608 5dfe7e537b75585b821bf9af83b720ec 92 Gene3D G3DSA:3.10.290.10 1 87 7.6E-24 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tlie_1271 7ee87fc57ec3eff0b113479a00396d77 324 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 322 2.9E-131 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Tlie_1271 7ee87fc57ec3eff0b113479a00396d77 324 SUPERFAMILY SSF51735 2 322 4.57E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1271 7ee87fc57ec3eff0b113479a00396d77 324 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 251 2.5E-60 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Tlie_1271 7ee87fc57ec3eff0b113479a00396d77 324 Gene3D G3DSA:3.90.25.10 171 305 1.9E-127 T 14-10-2018 Tlie_1271 7ee87fc57ec3eff0b113479a00396d77 324 Gene3D G3DSA:3.40.50.720 2 251 1.9E-127 T 14-10-2018 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 Gene3D G3DSA:2.30.42.10 378 469 2.6E-18 T 14-10-2018 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 SUPERFAMILY SSF50156 382 469 4.34E-18 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 379 439 5.0E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 Pfam PF13365 Trypsin-like peptidase domain 99 234 1.2E-38 T 14-10-2018 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 Gene3D G3DSA:2.40.10.120 43 264 6.1E-84 T 14-10-2018 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 45 467 1.3E-143 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 Gene3D G3DSA:2.30.42.10 268 366 9.6E-28 T 14-10-2018 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 SUPERFAMILY SSF50494 20 279 1.04E-70 T 14-10-2018 IPR009003 Peptidase S1, PA clan Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 Pfam PF13180 PDZ domain 270 359 7.7E-19 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 SUPERFAMILY SSF50156 243 366 1.02E-23 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 SMART SM00228 270 352 2.9E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 SMART SM00228 380 461 3.0E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 PRINTS PR00834 HtrA/DegQ protease family signature 129 149 3.6E-53 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 PRINTS PR00834 HtrA/DegQ protease family signature 310 322 3.6E-53 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 PRINTS PR00834 HtrA/DegQ protease family signature 227 244 3.6E-53 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 PRINTS PR00834 HtrA/DegQ protease family signature 108 120 3.6E-53 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 PRINTS PR00834 HtrA/DegQ protease family signature 205 222 3.6E-53 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tlie_0716 ee7ac8a0169f2fbb54167ee191a805cc 470 PRINTS PR00834 HtrA/DegQ protease family signature 169 193 3.6E-53 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tlie_1740 1331758358e2b2948ee3cd9ac5a965e6 340 SUPERFAMILY SSF50331 221 337 1.76E-15 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Tlie_1740 1331758358e2b2948ee3cd9ac5a965e6 340 SUPERFAMILY SSF52540 5 220 4.49E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1740 1331758358e2b2948ee3cd9ac5a965e6 340 SMART SM00382 29 272 2.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1740 1331758358e2b2948ee3cd9ac5a965e6 340 Gene3D G3DSA:2.40.50.140 225 336 1.3E-12 T 14-10-2018 Tlie_1740 1331758358e2b2948ee3cd9ac5a965e6 340 Gene3D G3DSA:3.40.50.300 1 224 8.9E-56 T 14-10-2018 Tlie_1740 1331758358e2b2948ee3cd9ac5a965e6 340 Pfam PF00005 ABC transporter 23 164 2.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1740 1331758358e2b2948ee3cd9ac5a965e6 340 Gene3D G3DSA:2.40.50.100 260 334 1.3E-12 T 14-10-2018 Tlie_1740 1331758358e2b2948ee3cd9ac5a965e6 340 Pfam PF03459 TOBE domain 275 336 1.4E-8 T 14-10-2018 IPR005116 Transport-associated OB, type 1 Tlie_1794 4a76b5dbbb39e2aa1e819f2256d12c18 377 Gene3D G3DSA:3.40.50.300 1 241 1.1E-72 T 14-10-2018 Tlie_1794 4a76b5dbbb39e2aa1e819f2256d12c18 377 SUPERFAMILY SSF54631 257 362 1.01E-11 T 14-10-2018 Tlie_1794 4a76b5dbbb39e2aa1e819f2256d12c18 377 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_1794 4a76b5dbbb39e2aa1e819f2256d12c18 377 SUPERFAMILY SSF52540 1 240 9.49E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1794 4a76b5dbbb39e2aa1e819f2256d12c18 377 SMART SM00382 27 214 1.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1794 4a76b5dbbb39e2aa1e819f2256d12c18 377 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 14 360 3.7E-112 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 Tlie_1794 4a76b5dbbb39e2aa1e819f2256d12c18 377 Pfam PF00005 ABC transporter 19 164 1.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1794 4a76b5dbbb39e2aa1e819f2256d12c18 377 Gene3D G3DSA:3.10.580.10 253 366 7.2E-9 T 14-10-2018 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 SUPERFAMILY SSF52335 931 1046 6.8E-21 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 Gene3D G3DSA:3.40.50.20 2 117 7.8E-43 T 14-10-2018 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 9 1043 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 539 8.4E-19 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 704 718 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 Gene3D G3DSA:3.40.50.20 517 657 7.3E-50 T 14-10-2018 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 Gene3D G3DSA:3.30.470.20 662 923 1.7E-91 T 14-10-2018 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 130 333 1.9E-65 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 668 868 1.1E-34 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 Pfam PF02142 MGS-like domain 953 1033 2.4E-11 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 SUPERFAMILY SSF56059 668 927 6.19E-83 T 14-10-2018 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 Gene3D G3DSA:3.30.470.20 120 402 3.9E-109 T 14-10-2018 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 Gene3D G3DSA:1.10.1030.10 405 510 5.0E-14 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 Gene3D G3DSA:3.30.1490.20 681 750 1.7E-91 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 SMART SM01096 420 540 1.3E-13 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 SUPERFAMILY SSF52440 552 669 2.16E-42 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 SUPERFAMILY SSF52440 7 128 4.6E-44 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 832 839 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 SMART SM00851 951 1034 5.3E-13 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 Gene3D G3DSA:3.40.50.1380 933 1050 1.3E-25 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 SUPERFAMILY SSF48108 396 545 5.36E-25 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 SUPERFAMILY SSF56059 130 400 5.48E-98 T 14-10-2018 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.2E-58 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 49 59 2.2E-58 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 169 181 2.2E-58 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 20 34 2.2E-58 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 240 257 2.2E-58 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 205 224 2.2E-58 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 2.2E-58 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1262 902ae18c2fc9d91e11404d2a2a12ea48 1050 SMART SM01209 674 835 0.003 T 14-10-2018 Tlie_0081 613bedd08a5bdc9e29f6768715c13ed9 702 PIRSF PIRSF005419 2 702 3.8E-258 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tlie_0081 613bedd08a5bdc9e29f6768715c13ed9 702 Gene3D G3DSA:1.10.490.80 602 701 2.1E-17 T 14-10-2018 Tlie_0081 613bedd08a5bdc9e29f6768715c13ed9 702 Gene3D G3DSA:1.10.8.540 511 599 1.0E-24 T 14-10-2018 Tlie_0081 613bedd08a5bdc9e29f6768715c13ed9 702 Pfam PF00771 FHIPEP family 27 692 1.6E-263 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tlie_0081 613bedd08a5bdc9e29f6768715c13ed9 702 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 16 701 1.4E-256 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 Tlie_0081 613bedd08a5bdc9e29f6768715c13ed9 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 152 170 3.0E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tlie_0081 613bedd08a5bdc9e29f6768715c13ed9 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 233 247 3.0E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tlie_0081 613bedd08a5bdc9e29f6768715c13ed9 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 182 199 3.0E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tlie_0081 613bedd08a5bdc9e29f6768715c13ed9 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 133 149 3.0E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tlie_0081 613bedd08a5bdc9e29f6768715c13ed9 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 3.0E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tlie_0081 613bedd08a5bdc9e29f6768715c13ed9 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 3.0E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tlie_0081 613bedd08a5bdc9e29f6768715c13ed9 702 Gene3D G3DSA:3.40.30.60 367 510 5.4E-55 T 14-10-2018 Tlie_0459 1b3483c43080db855fbf8a325324e499 929 SUPERFAMILY SSF52540 51 329 6.92E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0459 1b3483c43080db855fbf8a325324e499 929 Pfam PF04465 Protein of unknown function (DUF499) 157 344 1.3E-6 T 14-10-2018 IPR007555 Protein of unknown function DUF499 Tlie_0966 e695b59f1224faae88be1633aa5b4f0a 599 Gene3D G3DSA:3.40.50.300 75 438 1.3E-178 T 14-10-2018 Tlie_0966 e695b59f1224faae88be1633aa5b4f0a 599 SUPERFAMILY SSF50615 7 74 1.1E-10 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0966 e695b59f1224faae88be1633aa5b4f0a 599 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 215 438 2.8E-94 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0966 e695b59f1224faae88be1633aa5b4f0a 599 Gene3D G3DSA:2.40.50.100 119 188 1.3E-178 T 14-10-2018 Tlie_0966 e695b59f1224faae88be1633aa5b4f0a 599 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 429 438 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0966 e695b59f1224faae88be1633aa5b4f0a 599 SUPERFAMILY SSF47917 453 542 4.45E-23 T 14-10-2018 Tlie_0966 e695b59f1224faae88be1633aa5b4f0a 599 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 4 589 51.951 T 14-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0966 e695b59f1224faae88be1633aa5b4f0a 599 Gene3D G3DSA:1.10.1140.10 439 594 3.1E-53 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0966 e695b59f1224faae88be1633aa5b4f0a 599 SUPERFAMILY SSF52540 150 443 4.39E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0966 e695b59f1224faae88be1633aa5b4f0a 599 Gene3D G3DSA:2.40.30.20 1 74 4.6E-30 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0966 e695b59f1224faae88be1633aa5b4f0a 599 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 87 206 6.2E-46 T 14-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0966 e695b59f1224faae88be1633aa5b4f0a 599 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 9 71 2.0E-13 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_1149 740b440805aa5bf8b80dce00f19f20c7 329 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 327 1.4E-28 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Tlie_1149 740b440805aa5bf8b80dce00f19f20c7 329 Gene3D G3DSA:3.30.1330.10 2 163 3.0E-59 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tlie_1149 740b440805aa5bf8b80dce00f19f20c7 329 SUPERFAMILY SSF55326 3 162 2.09E-45 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tlie_1149 740b440805aa5bf8b80dce00f19f20c7 329 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 329 39.449 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tlie_1149 740b440805aa5bf8b80dce00f19f20c7 329 SUPERFAMILY SSF56042 164 327 1.24E-48 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tlie_1149 740b440805aa5bf8b80dce00f19f20c7 329 Gene3D G3DSA:3.90.650.10 164 329 2.3E-57 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tlie_1149 740b440805aa5bf8b80dce00f19f20c7 329 Pfam PF00586 AIR synthase related protein, N-terminal domain 54 157 1.3E-16 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Tlie_1149 740b440805aa5bf8b80dce00f19f20c7 329 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 328 6.1E-121 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tlie_0439 75cd3cce49dc1d4bec2952721bfbdbd3 417 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 294 372 6.2E-18 T 14-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain Tlie_0439 75cd3cce49dc1d4bec2952721bfbdbd3 417 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 181 260 1.2E-8 T 14-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain Tlie_0345 2a5a61cfe71511fde33a6ed3de089de6 389 Pfam PF07690 Major Facilitator Superfamily 18 352 5.0E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tlie_0345 2a5a61cfe71511fde33a6ed3de089de6 389 Gene3D G3DSA:1.20.1250.20 211 388 3.0E-12 T 14-10-2018 Tlie_0345 2a5a61cfe71511fde33a6ed3de089de6 389 SUPERFAMILY SSF103473 11 387 2.35E-41 T 14-10-2018 IPR036259 MFS transporter superfamily Tlie_0345 2a5a61cfe71511fde33a6ed3de089de6 389 Gene3D G3DSA:1.20.1250.20 11 191 4.3E-16 T 14-10-2018 Tlie_1152 0b2e6c0025384f2daea02e272d00c5fd 427 SUPERFAMILY SSF51246 327 420 4.63E-30 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Tlie_1152 0b2e6c0025384f2daea02e272d00c5fd 427 Gene3D G3DSA:3.90.600.10 328 426 5.2E-36 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tlie_1152 0b2e6c0025384f2daea02e272d00c5fd 427 SMART SM01210 328 422 3.0E-47 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tlie_1152 0b2e6c0025384f2daea02e272d00c5fd 427 SUPERFAMILY SSF56059 102 320 5.72E-56 T 14-10-2018 Tlie_1152 0b2e6c0025384f2daea02e272d00c5fd 427 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 420 1.6E-29 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tlie_1152 0b2e6c0025384f2daea02e272d00c5fd 427 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 2.6E-155 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tlie_1152 0b2e6c0025384f2daea02e272d00c5fd 427 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 39.38 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tlie_1152 0b2e6c0025384f2daea02e272d00c5fd 427 SMART SM01209 101 294 2.4E-106 T 14-10-2018 Tlie_1152 0b2e6c0025384f2daea02e272d00c5fd 427 SUPERFAMILY SSF52440 1 101 2.88E-32 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tlie_1152 0b2e6c0025384f2daea02e272d00c5fd 427 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 294 1.2E-66 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tlie_1152 0b2e6c0025384f2daea02e272d00c5fd 427 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 1.1E-32 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tlie_1152 0b2e6c0025384f2daea02e272d00c5fd 427 Gene3D G3DSA:3.40.50.20 2 93 3.6E-32 T 14-10-2018 Tlie_1152 0b2e6c0025384f2daea02e272d00c5fd 427 Gene3D G3DSA:3.30.1490.20 120 188 1.3E-18 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tlie_1152 0b2e6c0025384f2daea02e272d00c5fd 427 Gene3D G3DSA:3.30.470.20 189 325 2.0E-53 T 14-10-2018 Tlie_0423 abafb0d5061880f787c9e3bfbb61224b 344 Gene3D G3DSA:3.40.640.10 1 248 7.2E-88 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0423 abafb0d5061880f787c9e3bfbb61224b 344 PIRSF PIRSF017617 1 343 1.2E-130 T 14-10-2018 IPR023603 Threonine aldolase Tlie_0423 abafb0d5061880f787c9e3bfbb61224b 344 Pfam PF01212 Beta-eliminating lyase 5 286 9.2E-93 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Tlie_0423 abafb0d5061880f787c9e3bfbb61224b 344 Gene3D G3DSA:3.90.1150.10 249 341 5.6E-26 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_0423 abafb0d5061880f787c9e3bfbb61224b 344 SUPERFAMILY SSF53383 4 338 3.54E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0112 d2f8f47c74c8426f7232afebf07b8fbb 191 PRINTS PR01008 Flagellar L-ring protein signature 107 122 6.6E-16 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Tlie_0112 d2f8f47c74c8426f7232afebf07b8fbb 191 PRINTS PR01008 Flagellar L-ring protein signature 154 168 6.6E-16 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Tlie_0112 d2f8f47c74c8426f7232afebf07b8fbb 191 PRINTS PR01008 Flagellar L-ring protein signature 133 149 6.6E-16 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Tlie_0112 d2f8f47c74c8426f7232afebf07b8fbb 191 PRINTS PR01008 Flagellar L-ring protein signature 41 53 6.6E-16 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Tlie_0112 d2f8f47c74c8426f7232afebf07b8fbb 191 PRINTS PR01008 Flagellar L-ring protein signature 170 184 6.6E-16 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Tlie_0112 d2f8f47c74c8426f7232afebf07b8fbb 191 Pfam PF02107 Flagellar L-ring protein 24 190 7.9E-47 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Tlie_0189 e995bdd8f14f2906b064f50099261cda 117 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 116 5.0E-35 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Tlie_0189 e995bdd8f14f2906b064f50099261cda 117 Gene3D G3DSA:2.40.40.20 1 117 8.4E-55 T 14-10-2018 Tlie_0189 e995bdd8f14f2906b064f50099261cda 117 PIRSF PIRSF006246 1 117 1.5E-54 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Tlie_0189 e995bdd8f14f2906b064f50099261cda 117 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 2 115 7.1E-52 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Tlie_0189 e995bdd8f14f2906b064f50099261cda 117 SUPERFAMILY SSF50692 2 115 1.06E-49 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tlie_0189 e995bdd8f14f2906b064f50099261cda 117 Pfam PF02261 Aspartate decarboxylase 2 113 9.1E-54 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Tlie_0189 e995bdd8f14f2906b064f50099261cda 117 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 117 69.851 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Tlie_1383 96211c4228da2eba2d88eab683aa8753 390 SUPERFAMILY SSF103365 3 388 1.96E-84 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Tlie_1383 96211c4228da2eba2d88eab683aa8753 390 Pfam PF01139 tRNA-splicing ligase RtcB 18 387 4.0E-64 T 14-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Tlie_1383 96211c4228da2eba2d88eab683aa8753 390 Gene3D G3DSA:3.90.1860.10 1 388 1.2E-75 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Tlie_1315 0085f049da3d13ac645a8f5532f895d5 254 SUPERFAMILY SSF51735 10 253 1.37E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1315 0085f049da3d13ac645a8f5532f895d5 254 Gene3D G3DSA:3.40.50.720 1 254 4.7E-85 T 14-10-2018 Tlie_1315 0085f049da3d13ac645a8f5532f895d5 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 252 3.0E-70 T 14-10-2018 Tlie_1315 0085f049da3d13ac645a8f5532f895d5 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.0E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1315 0085f049da3d13ac645a8f5532f895d5 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.0E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1315 0085f049da3d13ac645a8f5532f895d5 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.0E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1315 0085f049da3d13ac645a8f5532f895d5 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.0E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1315 0085f049da3d13ac645a8f5532f895d5 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.0E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1315 0085f049da3d13ac645a8f5532f895d5 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.0E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1315 0085f049da3d13ac645a8f5532f895d5 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1315 0085f049da3d13ac645a8f5532f895d5 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1315 0085f049da3d13ac645a8f5532f895d5 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tlie_1315 0085f049da3d13ac645a8f5532f895d5 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Tlie_1315 0085f049da3d13ac645a8f5532f895d5 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 178 0.0025 T 14-10-2018 Tlie_1036 fb3e3ac67ae657baf10947d719489202 407 Pfam PF00872 Transposase, Mutator family 1 378 1.1E-131 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_1887 fb3e3ac67ae657baf10947d719489202 407 Pfam PF00872 Transposase, Mutator family 1 378 1.1E-131 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_1857 fb3e3ac67ae657baf10947d719489202 407 Pfam PF00872 Transposase, Mutator family 1 378 1.1E-131 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_0497 fb3e3ac67ae657baf10947d719489202 407 Pfam PF00872 Transposase, Mutator family 1 378 1.1E-131 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_1475 fb3e3ac67ae657baf10947d719489202 407 Pfam PF00872 Transposase, Mutator family 1 378 1.1E-131 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_1511 fb3e3ac67ae657baf10947d719489202 407 Pfam PF00872 Transposase, Mutator family 1 378 1.1E-131 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_1830 fb3e3ac67ae657baf10947d719489202 407 Pfam PF00872 Transposase, Mutator family 1 378 1.1E-131 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_0340 fb3e3ac67ae657baf10947d719489202 407 Pfam PF00872 Transposase, Mutator family 1 378 1.1E-131 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_0217 fb3e3ac67ae657baf10947d719489202 407 Pfam PF00872 Transposase, Mutator family 1 378 1.1E-131 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_0290 fb3e3ac67ae657baf10947d719489202 407 Pfam PF00872 Transposase, Mutator family 1 378 1.1E-131 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_1734 f74cc97a5fd76cbdc1dc4bd037d9c34d 415 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 79 379 4.6E-71 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tlie_1734 f74cc97a5fd76cbdc1dc4bd037d9c34d 415 SUPERFAMILY SSF53686 5 397 1.44E-94 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tlie_1734 f74cc97a5fd76cbdc1dc4bd037d9c34d 415 Gene3D G3DSA:3.40.50.1100 66 385 3.3E-114 T 14-10-2018 Tlie_1734 f74cc97a5fd76cbdc1dc4bd037d9c34d 415 PIRSF PIRSF038945 45 410 1.3E-90 T 14-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 Tlie_1734 f74cc97a5fd76cbdc1dc4bd037d9c34d 415 Gene3D G3DSA:3.40.50.1100 113 209 3.3E-114 T 14-10-2018 Tlie_1734 f74cc97a5fd76cbdc1dc4bd037d9c34d 415 TIGRFAM TIGR00260 thrC: threonine synthase 61 386 2.9E-69 T 14-10-2018 IPR004450 Threonine synthase-like Tlie_0926 adeeaf992b33f99497c5fb538fd5a214 125 Pfam PF02033 Ribosome-binding factor A 5 107 3.8E-26 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Tlie_0926 adeeaf992b33f99497c5fb538fd5a214 125 SUPERFAMILY SSF89919 1 110 7.46E-28 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Tlie_0926 adeeaf992b33f99497c5fb538fd5a214 125 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 94 1.0E-16 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Tlie_0926 adeeaf992b33f99497c5fb538fd5a214 125 ProSitePatterns PS01319 Ribosome-binding factor A signature. 73 94 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 Tlie_0926 adeeaf992b33f99497c5fb538fd5a214 125 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 112 1.2E-25 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Tlie_0926 adeeaf992b33f99497c5fb538fd5a214 125 Gene3D G3DSA:3.30.300.20 1 116 4.5E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Tlie_0926 adeeaf992b33f99497c5fb538fd5a214 125 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 107 23.836 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Tlie_1067 2ddf0161def0d0d2b55306b73989966b 441 Gene3D G3DSA:1.10.8.60 333 440 1.2E-35 T 14-10-2018 Tlie_1067 2ddf0161def0d0d2b55306b73989966b 441 Gene3D G3DSA:3.30.50.30 6 55 5.2E-20 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Tlie_1067 2ddf0161def0d0d2b55306b73989966b 441 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 15 427 8.6E-192 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Tlie_1067 2ddf0161def0d0d2b55306b73989966b 441 SMART SM01086 334 430 3.8E-27 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Tlie_1067 2ddf0161def0d0d2b55306b73989966b 441 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 334 406 2.3E-13 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Tlie_1067 2ddf0161def0d0d2b55306b73989966b 441 Pfam PF07724 AAA domain (Cdc48 subfamily) 132 328 1.7E-48 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tlie_1067 2ddf0161def0d0d2b55306b73989966b 441 SMART SM00994 15 54 3.5E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Tlie_1067 2ddf0161def0d0d2b55306b73989966b 441 Gene3D G3DSA:3.40.50.300 76 332 8.7E-107 T 14-10-2018 Tlie_1067 2ddf0161def0d0d2b55306b73989966b 441 Pfam PF06689 ClpX C4-type zinc finger 17 52 2.5E-18 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Tlie_1067 2ddf0161def0d0d2b55306b73989966b 441 SMART SM00382 131 292 1.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1067 2ddf0161def0d0d2b55306b73989966b 441 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 433 50.762 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Tlie_1067 2ddf0161def0d0d2b55306b73989966b 441 SUPERFAMILY SSF52540 81 415 3.8E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1067 2ddf0161def0d0d2b55306b73989966b 441 SUPERFAMILY SSF57716 16 51 2.0E-10 T 14-10-2018 Tlie_0045 79665bd3672e5b9fa1266395cfbababe 1231 Pfam PF05567 Neisseria PilC beta-propeller domain 719 1004 7.4E-28 T 14-10-2018 IPR008707 PilC beta-propeller domain Tlie_0045 79665bd3672e5b9fa1266395cfbababe 1231 SMART SM00564 1111 1153 26.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Tlie_0045 79665bd3672e5b9fa1266395cfbababe 1231 SMART SM00564 920 964 510.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Tlie_0045 79665bd3672e5b9fa1266395cfbababe 1231 SMART SM00564 811 848 540.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Tlie_0045 79665bd3672e5b9fa1266395cfbababe 1231 SMART SM00564 730 762 16.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Tlie_0045 79665bd3672e5b9fa1266395cfbababe 1231 SUPERFAMILY SSF50998 735 1162 2.04E-10 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Tlie_0045 79665bd3672e5b9fa1266395cfbababe 1231 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 32 53 1.3E-4 T 14-10-2018 IPR001434 Domain of unknown function DUF11 Tlie_1157 341a849be0769c0d31858cc7d4cfc51b 331 PIRSF PIRSF001439 1 331 1.6E-81 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Tlie_1157 341a849be0769c0d31858cc7d4cfc51b 331 Gene3D G3DSA:3.30.1780.10 7 326 4.2E-98 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 Tlie_1157 341a849be0769c0d31858cc7d4cfc51b 331 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 5 323 9.5E-80 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Tlie_1157 341a849be0769c0d31858cc7d4cfc51b 331 SUPERFAMILY SSF51735 3 330 1.8E-88 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1157 341a849be0769c0d31858cc7d4cfc51b 331 Gene3D G3DSA:3.40.50.720 128 304 4.2E-98 T 14-10-2018 Tlie_1681 d586c1e968a656b725f1d9a88af768b7 523 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 56 519 1.5E-190 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 Tlie_1681 d586c1e968a656b725f1d9a88af768b7 523 PIRSF PIRSF009451 16 523 7.7E-210 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 Tlie_1681 d586c1e968a656b725f1d9a88af768b7 523 SUPERFAMILY SSF100950 255 519 3.35E-52 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Tlie_1681 d586c1e968a656b725f1d9a88af768b7 523 Gene3D G3DSA:3.40.1080.10 257 523 1.0E-111 T 14-10-2018 Tlie_1681 d586c1e968a656b725f1d9a88af768b7 523 Gene3D G3DSA:3.40.1080.10 5 256 1.7E-95 T 14-10-2018 Tlie_1681 d586c1e968a656b725f1d9a88af768b7 523 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 36 520 2.1E-201 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 Tlie_1681 d586c1e968a656b725f1d9a88af768b7 523 SUPERFAMILY SSF100950 45 251 1.1E-67 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Tlie_1564 8f26ff042a186b7b748fef49df5c1d14 418 ProSitePatterns PS01244 Aconitase family signature 2. 350 363 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Tlie_1564 8f26ff042a186b7b748fef49df5c1d14 418 PRINTS PR00415 Aconitase family signature 350 363 7.8E-20 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1564 8f26ff042a186b7b748fef49df5c1d14 418 PRINTS PR00415 Aconitase family signature 203 216 7.8E-20 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1564 8f26ff042a186b7b748fef49df5c1d14 418 PRINTS PR00415 Aconitase family signature 189 202 7.8E-20 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1564 8f26ff042a186b7b748fef49df5c1d14 418 PRINTS PR00415 Aconitase family signature 127 142 7.8E-20 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1564 8f26ff042a186b7b748fef49df5c1d14 418 PRINTS PR00415 Aconitase family signature 113 126 7.8E-20 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1564 8f26ff042a186b7b748fef49df5c1d14 418 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 416 6.3E-168 T 14-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Tlie_1564 8f26ff042a186b7b748fef49df5c1d14 418 Gene3D G3DSA:3.30.499.10 273 418 4.1E-60 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Tlie_1564 8f26ff042a186b7b748fef49df5c1d14 418 ProSitePatterns PS00450 Aconitase family signature 1. 292 308 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Tlie_1564 8f26ff042a186b7b748fef49df5c1d14 418 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 415 1.8E-173 T 14-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 Tlie_1564 8f26ff042a186b7b748fef49df5c1d14 418 Gene3D G3DSA:3.30.499.20 4 270 2.3E-100 T 14-10-2018 Tlie_1564 8f26ff042a186b7b748fef49df5c1d14 418 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 417 48.474 T 14-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Tlie_1564 8f26ff042a186b7b748fef49df5c1d14 418 SUPERFAMILY SSF53732 1 417 5.76E-141 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Tlie_1564 8f26ff042a186b7b748fef49df5c1d14 418 Pfam PF00330 Aconitase family (aconitate hydratase) 26 409 2.8E-98 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1398 ac4ef0c8fa47b28164be9f8a8a905034 281 Gene3D G3DSA:3.10.310.10 11 273 7.8E-93 T 14-10-2018 Tlie_1398 ac4ef0c8fa47b28164be9f8a8a905034 281 Gene3D G3DSA:3.10.310.10 129 269 7.8E-93 T 14-10-2018 Tlie_1398 ac4ef0c8fa47b28164be9f8a8a905034 281 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 9 278 1.2E-43 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Tlie_1398 ac4ef0c8fa47b28164be9f8a8a905034 281 Pfam PF02567 Phenazine biosynthesis-like protein 14 277 3.2E-65 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Tlie_1398 ac4ef0c8fa47b28164be9f8a8a905034 281 PIRSF PIRSF016184 6 281 8.2E-58 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Tlie_1398 ac4ef0c8fa47b28164be9f8a8a905034 281 SUPERFAMILY SSF54506 9 281 4.92E-73 T 14-10-2018 Tlie_1239 35e0e8d2c4da9e57be6a0f08baac2a72 226 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 207 2.7E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_1239 35e0e8d2c4da9e57be6a0f08baac2a72 226 SUPERFAMILY SSF46894 143 215 8.16E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tlie_1239 35e0e8d2c4da9e57be6a0f08baac2a72 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_1239 35e0e8d2c4da9e57be6a0f08baac2a72 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_1239 35e0e8d2c4da9e57be6a0f08baac2a72 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_1239 35e0e8d2c4da9e57be6a0f08baac2a72 226 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_1239 35e0e8d2c4da9e57be6a0f08baac2a72 226 SUPERFAMILY SSF52172 7 133 6.74E-7 T 14-10-2018 IPR011006 CheY-like superfamily Tlie_1239 35e0e8d2c4da9e57be6a0f08baac2a72 226 Gene3D G3DSA:3.40.50.12740 8 215 4.8E-32 T 14-10-2018 Tlie_1239 35e0e8d2c4da9e57be6a0f08baac2a72 226 SMART SM00421 152 209 2.5E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_0722 3af163521e5ccbf7cbe759c7902001af 88 SUPERFAMILY SSF47060 1 87 3.24E-37 T 14-10-2018 IPR009068 S15/NS1, RNA-binding Tlie_0722 3af163521e5ccbf7cbe759c7902001af 88 Gene3D G3DSA:1.10.287.10 1 88 7.8E-38 T 14-10-2018 Tlie_0722 3af163521e5ccbf7cbe759c7902001af 88 Pfam PF00312 Ribosomal protein S15 7 87 7.4E-39 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0722 3af163521e5ccbf7cbe759c7902001af 88 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 87 6.4E-40 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0722 3af163521e5ccbf7cbe759c7902001af 88 SMART SM01387 7 87 5.7E-53 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0722 3af163521e5ccbf7cbe759c7902001af 88 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 2 88 23.737 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0722 3af163521e5ccbf7cbe759c7902001af 88 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 87 8.0E-23 T 14-10-2018 Tlie_0722 3af163521e5ccbf7cbe759c7902001af 88 ProSitePatterns PS00362 Ribosomal protein S15 signature. 38 68 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1505 40c76de9c3b91e2472aeded2aa815a1f 334 Gene3D G3DSA:3.40.190.170 26 334 3.7E-72 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Tlie_1505 40c76de9c3b91e2472aeded2aa815a1f 334 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 314 1.0E-43 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Tlie_1486 03557af639ad94eed1b8e428e5b6627c 235 Pfam PF00072 Response regulator receiver domain 4 113 2.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_1486 03557af639ad94eed1b8e428e5b6627c 235 SMART SM00448 2 112 1.7E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_1486 03557af639ad94eed1b8e428e5b6627c 235 Gene3D G3DSA:3.40.50.2300 1 119 1.4E-36 T 14-10-2018 Tlie_1486 03557af639ad94eed1b8e428e5b6627c 235 SUPERFAMILY SSF46894 129 229 1.9E-28 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tlie_1486 03557af639ad94eed1b8e428e5b6627c 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 1.7E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tlie_1486 03557af639ad94eed1b8e428e5b6627c 235 Gene3D G3DSA:1.10.10.10 120 232 8.2E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1486 03557af639ad94eed1b8e428e5b6627c 235 SMART SM00862 152 228 6.6E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tlie_1486 03557af639ad94eed1b8e428e5b6627c 235 SUPERFAMILY SSF52172 2 123 1.01E-41 T 14-10-2018 IPR011006 CheY-like superfamily Tlie_1591 8f3f24ed924c01d2d832b40c633606cb 337 Gene3D G3DSA:3.40.50.1220 206 337 2.3E-53 T 14-10-2018 Tlie_1591 8f3f24ed924c01d2d832b40c633606cb 337 SUPERFAMILY SSF52467 210 330 4.76E-44 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Tlie_1591 8f3f24ed924c01d2d832b40c633606cb 337 SUPERFAMILY SSF52402 10 201 1.88E-44 T 14-10-2018 Tlie_1591 8f3f24ed924c01d2d832b40c633606cb 337 SMART SM00893 10 192 7.3E-33 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Tlie_1591 8f3f24ed924c01d2d832b40c633606cb 337 Pfam PF01012 Electron transfer flavoprotein domain 11 186 8.4E-35 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Tlie_1591 8f3f24ed924c01d2d832b40c633606cb 337 PIRSF PIRSF000089 7 335 1.0E-102 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Tlie_1591 8f3f24ed924c01d2d832b40c633606cb 337 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 210 292 4.5E-33 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Tlie_1591 8f3f24ed924c01d2d832b40c633606cb 337 Gene3D G3DSA:3.40.50.620 7 205 4.9E-60 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1018 77c2c336fece1568e8fab9ef4fb74bf8 384 Gene3D G3DSA:3.40.50.2300 28 348 2.5E-95 T 14-10-2018 Tlie_1018 77c2c336fece1568e8fab9ef4fb74bf8 384 Pfam PF13458 Periplasmic binding protein 26 365 8.8E-71 T 14-10-2018 IPR028081 Leucine-binding protein domain Tlie_1018 77c2c336fece1568e8fab9ef4fb74bf8 384 Gene3D G3DSA:3.40.50.2300 145 276 2.5E-95 T 14-10-2018 Tlie_1018 77c2c336fece1568e8fab9ef4fb74bf8 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 5.2E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tlie_1018 77c2c336fece1568e8fab9ef4fb74bf8 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 68 86 5.2E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tlie_1018 77c2c336fece1568e8fab9ef4fb74bf8 384 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 5.2E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tlie_1018 77c2c336fece1568e8fab9ef4fb74bf8 384 SUPERFAMILY SSF53822 25 373 4.97E-91 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Tlie_1433 821a22638f7df22802f69ba4dcb937ed 140 SUPERFAMILY SSF117856 9 129 1.46E-19 T 14-10-2018 Tlie_1433 821a22638f7df22802f69ba4dcb937ed 140 Gene3D G3DSA:3.30.1330.80 3 134 2.4E-26 T 14-10-2018 Tlie_1433 821a22638f7df22802f69ba4dcb937ed 140 Pfam PF03479 Domain of unknown function (DUF296) 11 117 9.9E-15 T 14-10-2018 IPR005175 PPC domain Tlie_1046 6de469c1c3d661b9df06b9b51945de8e 156 Pfam PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) 4 152 1.5E-46 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tlie_1046 6de469c1c3d661b9df06b9b51945de8e 156 Gene3D G3DSA:3.50.20.10 43 155 8.7E-40 T 14-10-2018 IPR016105 Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tlie_1046 6de469c1c3d661b9df06b9b51945de8e 156 SUPERFAMILY SSF56271 4 153 1.54E-42 T 14-10-2018 IPR016104 Pyruvoyl-dependent histidine/arginine decarboxylase GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tlie_1046 6de469c1c3d661b9df06b9b51945de8e 156 Hamap MF_01404 Pyruvoyl-dependent arginine decarboxylase [pdaD]. 1 156 43.5 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tlie_1046 6de469c1c3d661b9df06b9b51945de8e 156 PIRSF PIRSF005216 1 155 1.0E-40 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tlie_1046 6de469c1c3d661b9df06b9b51945de8e 156 TIGRFAM TIGR00286 TIGR00286: arginine decarboxylase, pyruvoyl-dependent 4 150 8.5E-45 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tlie_1046 6de469c1c3d661b9df06b9b51945de8e 156 ProDom PD010449 DECARBOXYLASE PYRUVOYL-DEPENDENT ARGININE SUBUNIT ALPHA CONTAINS: BETA PVLARGDC LYA DECARBOX 4 141 2.0E-36 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tlie_1046 6de469c1c3d661b9df06b9b51945de8e 156 Gene3D G3DSA:3.30.60.30 1 42 8.4E-17 T 14-10-2018 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 4.6E-25 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 169 188 4.6E-25 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 4.6E-25 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 203 216 4.6E-25 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 252 1.6E-27 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 SUPERFAMILY SSF55957 365 449 1.06E-22 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 SUPERFAMILY SSF53738 256 363 9.81E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 Gene3D G3DSA:3.40.120.10 171 248 2.7E-31 T 14-10-2018 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 444 2.7E-11 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 136 2.9E-31 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 SUPERFAMILY SSF53738 153 254 3.57E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 SUPERFAMILY SSF53738 3 175 2.86E-37 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 Gene3D G3DSA:3.40.120.10 1 147 3.4E-47 T 14-10-2018 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 Gene3D G3DSA:3.40.120.10 249 367 9.2E-36 T 14-10-2018 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 367 2.7E-20 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tlie_1572 f3b7ae76973e17019dd756a735d4e7f3 460 Gene3D G3DSA:3.30.310.50 368 454 2.2E-25 T 14-10-2018 Tlie_1125 187081706deb90069ed0515bea5d9fa3 86 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 5 76 1.0E-25 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A Tlie_1125 187081706deb90069ed0515bea5d9fa3 86 Pfam PF04025 Domain of unknown function (DUF370) 5 77 4.3E-36 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A Tlie_1125 187081706deb90069ed0515bea5d9fa3 86 Hamap MF_01503 UPF0296 protein . 3 83 28.219 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A Tlie_1040 417fa9737648492af1e9dc0590615199 55 Gene3D G3DSA:2.20.28.30 5 49 1.7E-5 T 14-10-2018 Tlie_0992 ed0c5424f2143f44338796decd3b89f8 380 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 63 374 2.3E-104 T 14-10-2018 IPR010119 Gluconeogenesis factor Tlie_0992 ed0c5424f2143f44338796decd3b89f8 380 Gene3D G3DSA:3.40.50.12300 58 380 8.3E-116 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily Tlie_0992 ed0c5424f2143f44338796decd3b89f8 380 Hamap MF_00973 Gluconeogenesis factor. 59 376 33.906 T 14-10-2018 IPR010119 Gluconeogenesis factor Tlie_0992 ed0c5424f2143f44338796decd3b89f8 380 SUPERFAMILY SSF142338 60 371 2.09E-88 T 14-10-2018 Tlie_0992 ed0c5424f2143f44338796decd3b89f8 380 Pfam PF01933 Uncharacterised protein family UPF0052 63 350 2.5E-94 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 Tlie_1104 302eedd905acd14f509e44012becdfef 330 SUPERFAMILY SSF53901 8 328 1.39E-68 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Tlie_1104 302eedd905acd14f509e44012becdfef 330 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 112 189 1.5E-27 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Tlie_1104 302eedd905acd14f509e44012becdfef 330 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 9 328 6.2E-115 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Tlie_1104 302eedd905acd14f509e44012becdfef 330 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 241 328 1.5E-34 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Tlie_1104 302eedd905acd14f509e44012becdfef 330 Gene3D G3DSA:3.40.47.10 6 330 2.8E-129 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Tlie_1104 302eedd905acd14f509e44012becdfef 330 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 7 330 63.424 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Tlie_0769 8eff1ef228d37378accfbf505a4da156 216 Pfam PF01386 Ribosomal L25p family 8 96 1.6E-20 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Tlie_0769 8eff1ef228d37378accfbf505a4da156 216 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 9 186 3.9E-39 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Tlie_0769 8eff1ef228d37378accfbf505a4da156 216 Gene3D G3DSA:2.170.120.20 100 189 1.3E-23 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal Tlie_0769 8eff1ef228d37378accfbf505a4da156 216 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 189 26.696 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Tlie_0769 8eff1ef228d37378accfbf505a4da156 216 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 188 2.0E-24 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain Tlie_0769 8eff1ef228d37378accfbf505a4da156 216 SUPERFAMILY SSF50715 11 187 1.69E-48 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tlie_0769 8eff1ef228d37378accfbf505a4da156 216 Gene3D G3DSA:2.40.240.10 5 98 1.2E-20 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tlie_0769 8eff1ef228d37378accfbf505a4da156 216 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 15 99 2.0E-10 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Tlie_1203 04971352c7065542088bf591cee94ff1 153 SUPERFAMILY SSF56770 12 141 2.49E-54 T 14-10-2018 Tlie_1203 04971352c7065542088bf591cee94ff1 153 Gene3D G3DSA:3.40.50.12280 3 152 6.4E-56 T 14-10-2018 Tlie_1203 04971352c7065542088bf591cee94ff1 153 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 24 132 1.3E-28 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_0661 21b4b74bd0fd23e487f5927ae539cfaf 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 5.1E-75 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tlie_0661 21b4b74bd0fd23e487f5927ae539cfaf 179 PIRSF PIRSF002162 1 177 1.4E-46 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0661 21b4b74bd0fd23e487f5927ae539cfaf 179 Gene3D G3DSA:3.90.930.12 1 82 2.9E-29 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0661 21b4b74bd0fd23e487f5927ae539cfaf 179 Pfam PF00347 Ribosomal protein L6 90 164 6.3E-18 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0661 21b4b74bd0fd23e487f5927ae539cfaf 179 Pfam PF00347 Ribosomal protein L6 12 82 4.7E-18 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0661 21b4b74bd0fd23e487f5927ae539cfaf 179 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.2E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tlie_0661 21b4b74bd0fd23e487f5927ae539cfaf 179 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.2E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tlie_0661 21b4b74bd0fd23e487f5927ae539cfaf 179 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.2E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tlie_0661 21b4b74bd0fd23e487f5927ae539cfaf 179 SUPERFAMILY SSF56053 2 82 1.88E-25 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0661 21b4b74bd0fd23e487f5927ae539cfaf 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 38.316 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tlie_0661 21b4b74bd0fd23e487f5927ae539cfaf 179 Gene3D G3DSA:3.90.930.12 83 179 2.3E-39 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0661 21b4b74bd0fd23e487f5927ae539cfaf 179 SUPERFAMILY SSF56053 83 176 1.21E-35 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0661 21b4b74bd0fd23e487f5927ae539cfaf 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1058 874fb8fc40135692bd9b4a19a540103f 369 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 164 368 2.0E-90 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Tlie_1058 874fb8fc40135692bd9b4a19a540103f 369 Pfam PF02502 Ribose/Galactose Isomerase 3 144 7.6E-54 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Tlie_1058 874fb8fc40135692bd9b4a19a540103f 369 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 149 6.5E-55 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Tlie_1058 874fb8fc40135692bd9b4a19a540103f 369 Gene3D G3DSA:3.40.1400.10 1 155 3.4E-61 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Tlie_1058 874fb8fc40135692bd9b4a19a540103f 369 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 146 1.6E-48 T 14-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 Tlie_1058 874fb8fc40135692bd9b4a19a540103f 369 SUPERFAMILY SSF53271 165 367 9.7E-73 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tlie_1058 874fb8fc40135692bd9b4a19a540103f 369 Pfam PF14681 Uracil phosphoribosyltransferase 167 368 6.4E-77 T 14-10-2018 Tlie_1058 874fb8fc40135692bd9b4a19a540103f 369 Gene3D G3DSA:3.40.50.2020 156 369 6.6E-86 T 14-10-2018 Tlie_1058 874fb8fc40135692bd9b4a19a540103f 369 SUPERFAMILY SSF89623 1 152 8.89E-56 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Tlie_1058 874fb8fc40135692bd9b4a19a540103f 369 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 163 369 47.701 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 SMART SM00316 619 689 5.5E-24 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 Gene3D G3DSA:3.30.1370.10 549 620 3.1E-21 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 SUPERFAMILY SSF54211 289 486 1.87E-50 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 Gene3D G3DSA:3.30.230.70 2 228 6.4E-84 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 Pfam PF01138 3' exoribonuclease family, domain 1 320 455 1.9E-22 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 Pfam PF01138 3' exoribonuclease family, domain 1 14 142 3.2E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 Pfam PF00013 KH domain 555 613 6.8E-11 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 SUPERFAMILY SSF55666 449 547 3.67E-29 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 692 30.191 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 SMART SM00322 551 616 1.2E-13 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 Gene3D G3DSA:3.30.230.70 238 548 4.0E-119 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 690 8.5E-303 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 SUPERFAMILY SSF54791 553 639 7.59E-25 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 SUPERFAMILY SSF54211 5 142 5.57E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 317 5.9E-12 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 SUPERFAMILY SSF50249 618 694 3.35E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 PIRSF PIRSF005499 1 724 8.1E-296 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 Pfam PF03725 3' exoribonuclease family, domain 2 145 208 1.1E-15 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 Pfam PF03725 3' exoribonuclease family, domain 2 459 528 1.7E-7 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 SUPERFAMILY SSF55666 143 232 6.68E-27 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 Gene3D G3DSA:2.40.50.140 621 691 8.4E-24 T 14-10-2018 Tlie_0723 8a2e1acf8d74b8564151d52c8c8dafc1 745 Pfam PF00575 S1 RNA binding domain 618 689 1.5E-17 T 14-10-2018 IPR003029 S1 domain GO:0003676 Tlie_1020 6d633ee945a1a4821ef45b43440deb3b 257 Gene3D G3DSA:3.40.50.300 5 253 1.1E-59 T 14-10-2018 Tlie_1020 6d633ee945a1a4821ef45b43440deb3b 257 Pfam PF00005 ABC transporter 23 177 1.4E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1020 6d633ee945a1a4821ef45b43440deb3b 257 SUPERFAMILY SSF52540 6 248 4.58E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1020 6d633ee945a1a4821ef45b43440deb3b 257 SMART SM00382 31 226 7.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1020 6d633ee945a1a4821ef45b43440deb3b 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 248 6.9E-11 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Tlie_0772 359b42454df57f01d4dffbfb306ee77e 267 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 176 233 1.7E-9 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Tlie_0772 359b42454df57f01d4dffbfb306ee77e 267 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 33 106 4.2E-28 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Tlie_0772 359b42454df57f01d4dffbfb306ee77e 267 SUPERFAMILY SSF101386 142 243 7.85E-26 T 14-10-2018 Tlie_0772 359b42454df57f01d4dffbfb306ee77e 267 Gene3D G3DSA:1.10.287.1080 8 131 3.4E-46 T 14-10-2018 Tlie_0772 359b42454df57f01d4dffbfb306ee77e 267 TIGRFAM TIGR00444 mazG: MazG family protein 17 264 9.1E-96 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG Tlie_0772 359b42454df57f01d4dffbfb306ee77e 267 Gene3D G3DSA:1.10.287.1080 136 266 5.1E-44 T 14-10-2018 Tlie_0772 359b42454df57f01d4dffbfb306ee77e 267 SUPERFAMILY SSF101386 10 110 1.55E-25 T 14-10-2018 Tlie_0977 94831f7ea794e62ae2e1e0bb04efa067 389 Pfam PF01098 Cell cycle protein 35 377 2.0E-80 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tlie_0142 06dddba7cfb03af1c6f3cfbe8da7a1a3 336 SUPERFAMILY SSF51735 3 183 3.31E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0142 06dddba7cfb03af1c6f3cfbe8da7a1a3 336 SUPERFAMILY SSF48179 184 330 2.04E-69 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tlie_0142 06dddba7cfb03af1c6f3cfbe8da7a1a3 336 Gene3D G3DSA:3.40.50.720 1 182 2.9E-79 T 14-10-2018 Tlie_0142 06dddba7cfb03af1c6f3cfbe8da7a1a3 336 PIRSF PIRSF000116 202 332 6.7E-13 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tlie_0142 06dddba7cfb03af1c6f3cfbe8da7a1a3 336 PIRSF PIRSF000116 3 207 8.7E-42 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tlie_0142 06dddba7cfb03af1c6f3cfbe8da7a1a3 336 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 178 2.6E-75 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tlie_0142 06dddba7cfb03af1c6f3cfbe8da7a1a3 336 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 6.1E-65 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tlie_0142 06dddba7cfb03af1c6f3cfbe8da7a1a3 336 Gene3D G3DSA:1.10.3730.40 183 335 1.1E-65 T 14-10-2018 Tlie_0142 06dddba7cfb03af1c6f3cfbe8da7a1a3 336 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 329 43.465 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tlie_0142 06dddba7cfb03af1c6f3cfbe8da7a1a3 336 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 327 1.1E-135 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 TIGRFAM TIGR00016 ackA: acetate kinase 1 396 9.7E-163 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 Gene3D G3DSA:3.30.420.40 1 196 1.4E-78 T 14-10-2018 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 SUPERFAMILY SSF53067 1 197 7.12E-74 T 14-10-2018 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 195.751 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 PRINTS PR00471 Acetate kinase family signature 204 225 9.4E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 PRINTS PR00471 Acetate kinase family signature 377 389 9.4E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 PRINTS PR00471 Acetate kinase family signature 301 314 9.4E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 PRINTS PR00471 Acetate kinase family signature 174 187 9.4E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 PRINTS PR00471 Acetate kinase family signature 3 14 9.4E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 PRINTS PR00471 Acetate kinase family signature 323 339 9.4E-46 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 SUPERFAMILY SSF53067 158 395 8.37E-92 T 14-10-2018 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 Pfam PF00871 Acetokinase family 2 390 1.2E-159 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 PIRSF PIRSF000722 1 397 4.0E-157 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1109 ce4c5a085eba23ae441687edd857c417 397 Gene3D G3DSA:3.30.420.40 197 397 3.3E-83 T 14-10-2018 Tlie_0508 b80761f88724bde51ed16f585a44af28 150 Gene3D G3DSA:3.40.30.10 1 146 3.0E-42 T 14-10-2018 Tlie_0508 b80761f88724bde51ed16f585a44af28 150 PIRSF PIRSF000239 1 149 2.0E-36 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tlie_0508 b80761f88724bde51ed16f585a44af28 150 SUPERFAMILY SSF52833 3 144 3.76E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tlie_0508 b80761f88724bde51ed16f585a44af28 150 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 107 136 6.6E-7 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tlie_0508 b80761f88724bde51ed16f585a44af28 150 Pfam PF00578 AhpC/TSA family 3 86 1.0E-18 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 428 1.7E-23 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 Gene3D G3DSA:1.10.275.10 1 92 3.9E-37 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 Pfam PF00206 Lyase 7 282 1.9E-54 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 Gene3D G3DSA:1.20.200.10 93 348 1.1E-95 T 14-10-2018 Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 1.4E-170 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 3.0E-24 T 14-10-2018 IPR000362 Fumarate lyase family Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 3.0E-24 T 14-10-2018 IPR000362 Fumarate lyase family Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 3.0E-24 T 14-10-2018 IPR000362 Fumarate lyase family Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 3.0E-24 T 14-10-2018 IPR000362 Fumarate lyase family Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 SMART SM00998 349 429 1.2E-33 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 3.8E-6 T 14-10-2018 Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 3.8E-6 T 14-10-2018 Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 3.8E-6 T 14-10-2018 Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 3.8E-6 T 14-10-2018 Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 Gene3D G3DSA:1.10.40.30 349 429 2.1E-29 T 14-10-2018 Tlie_1078 032c5a02bf90e8a64b92871b04505012 436 SUPERFAMILY SSF48557 3 428 2.04E-133 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Tlie_0450 56f6ba8b532d3beb54e39ee8e82b3bd7 126 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0450 56f6ba8b532d3beb54e39ee8e82b3bd7 126 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 34 2.8E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0450 56f6ba8b532d3beb54e39ee8e82b3bd7 126 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 34 1.4E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0173 5652d43e71e28773f9cec8256db079b5 277 Pfam PF08543 Phosphomethylpyrimidine kinase 20 263 3.5E-95 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Tlie_0173 5652d43e71e28773f9cec8256db079b5 277 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 13 266 6.1E-103 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tlie_0173 5652d43e71e28773f9cec8256db079b5 277 SUPERFAMILY SSF53613 10 267 5.61E-80 T 14-10-2018 IPR029056 Ribokinase-like Tlie_0173 5652d43e71e28773f9cec8256db079b5 277 Gene3D G3DSA:3.40.1190.20 2 271 3.1E-100 T 14-10-2018 IPR029056 Ribokinase-like Tlie_1095 da429c0a79e7cf3973b4d03bc5507481 440 Gene3D G3DSA:3.20.20.140 59 373 1.9E-125 T 14-10-2018 Tlie_1095 da429c0a79e7cf3973b4d03bc5507481 440 SUPERFAMILY SSF51556 58 365 6.81E-93 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tlie_1095 da429c0a79e7cf3973b4d03bc5507481 440 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 22 430 4.3E-124 T 14-10-2018 Tlie_1095 da429c0a79e7cf3973b4d03bc5507481 440 Hamap MF_00220_B Dihydroorotase [pyrC]. 4 432 39.677 T 14-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1095 da429c0a79e7cf3973b4d03bc5507481 440 Gene3D G3DSA:2.30.40.10 21 428 1.9E-125 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tlie_1095 da429c0a79e7cf3973b4d03bc5507481 440 Pfam PF01979 Amidohydrolase family 54 428 1.8E-24 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tlie_1095 da429c0a79e7cf3973b4d03bc5507481 440 SUPERFAMILY SSF51338 1 437 4.47E-23 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tlie_0646 4b80b88cda63567c56913dc799b250a0 211 Gene3D G3DSA:2.40.50.620 33 97 8.8E-15 T 14-10-2018 Tlie_0646 4b80b88cda63567c56913dc799b250a0 211 Pfam PF00297 Ribosomal protein L3 99 183 3.3E-13 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0646 4b80b88cda63567c56913dc799b250a0 211 Gene3D G3DSA:2.40.30.10 129 210 1.4E-14 T 14-10-2018 Tlie_0646 4b80b88cda63567c56913dc799b250a0 211 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site Tlie_0646 4b80b88cda63567c56913dc799b250a0 211 SUPERFAMILY SSF50447 1 207 6.0E-79 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tlie_0646 4b80b88cda63567c56913dc799b250a0 211 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 4.5E-88 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0646 4b80b88cda63567c56913dc799b250a0 211 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 39.317 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0974 782f84178e230f1bdb63ec074faeb7fd 464 Gene3D G3DSA:3.40.1190.10 95 328 9.8E-43 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tlie_0974 782f84178e230f1bdb63ec074faeb7fd 464 Gene3D G3DSA:3.90.190.20 331 463 3.4E-31 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tlie_0974 782f84178e230f1bdb63ec074faeb7fd 464 SUPERFAMILY SSF63418 23 109 1.83E-17 T 14-10-2018 IPR035911 MurE/MurF, N-terminal Tlie_0974 782f84178e230f1bdb63ec074faeb7fd 464 SUPERFAMILY SSF53244 332 459 6.56E-26 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tlie_0974 782f84178e230f1bdb63ec074faeb7fd 464 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 34 460 3.6E-96 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0974 782f84178e230f1bdb63ec074faeb7fd 464 SUPERFAMILY SSF53623 118 329 2.35E-35 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tlie_0974 782f84178e230f1bdb63ec074faeb7fd 464 Pfam PF02875 Mur ligase family, glutamate ligase domain 342 411 6.4E-10 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tlie_0974 782f84178e230f1bdb63ec074faeb7fd 464 Gene3D G3DSA:3.40.1390.10 4 85 3.7E-17 T 14-10-2018 Tlie_0974 782f84178e230f1bdb63ec074faeb7fd 464 Pfam PF01225 Mur ligase family, catalytic domain 32 106 1.2E-9 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Tlie_0974 782f84178e230f1bdb63ec074faeb7fd 464 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 7 462 27.459 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0974 782f84178e230f1bdb63ec074faeb7fd 464 Pfam PF08245 Mur ligase middle domain 121 308 4.5E-29 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tlie_0036 8948d62988e0b956bddf36d5be99e548 239 SMART SM00862 152 227 4.8E-32 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tlie_0036 8948d62988e0b956bddf36d5be99e548 239 Gene3D G3DSA:1.10.10.10 131 239 1.6E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0036 8948d62988e0b956bddf36d5be99e548 239 SUPERFAMILY SSF46894 127 228 1.25E-31 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tlie_0036 8948d62988e0b956bddf36d5be99e548 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 3.3E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tlie_0036 8948d62988e0b956bddf36d5be99e548 239 SMART SM00448 4 117 5.1E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0036 8948d62988e0b956bddf36d5be99e548 239 Gene3D G3DSA:3.40.50.2300 1 130 4.2E-42 T 14-10-2018 Tlie_0036 8948d62988e0b956bddf36d5be99e548 239 Pfam PF00072 Response regulator receiver domain 6 118 2.7E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0036 8948d62988e0b956bddf36d5be99e548 239 SUPERFAMILY SSF52172 2 129 1.25E-44 T 14-10-2018 IPR011006 CheY-like superfamily Tlie_0898 590381155a4cced523abb7da3e5356f1 494 Pfam PF14520 Helix-hairpin-helix domain 431 483 5.6E-7 T 14-10-2018 Tlie_0898 590381155a4cced523abb7da3e5356f1 494 SUPERFAMILY SSF47781 366 483 7.41E-19 T 14-10-2018 IPR010994 RuvA domain 2-like Tlie_0898 590381155a4cced523abb7da3e5356f1 494 Gene3D G3DSA:1.10.150.20 425 483 6.9E-13 T 14-10-2018 Tlie_0898 590381155a4cced523abb7da3e5356f1 494 SUPERFAMILY SSF46600 192 239 2.48E-10 T 14-10-2018 IPR036876 UVR domain superfamily Tlie_0898 590381155a4cced523abb7da3e5356f1 494 SUPERFAMILY SSF82771 15 97 2.22E-19 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Tlie_0898 590381155a4cced523abb7da3e5356f1 494 Gene3D G3DSA:3.40.1440.10 3 102 3.5E-29 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Tlie_0898 590381155a4cced523abb7da3e5356f1 494 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 267 415 1.2E-47 T 14-10-2018 IPR001162 UvrC family homology region Tlie_0898 590381155a4cced523abb7da3e5356f1 494 Gene3D G3DSA:3.30.420.340 260 424 3.4E-50 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily Tlie_0898 590381155a4cced523abb7da3e5356f1 494 Pfam PF02151 UvrB/uvrC motif 207 237 4.5E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 Tlie_0898 590381155a4cced523abb7da3e5356f1 494 SMART SM00465 16 98 1.6E-16 T 14-10-2018 IPR000305 GIY-YIG endonuclease Tlie_0898 590381155a4cced523abb7da3e5356f1 494 Pfam PF01541 GIY-YIG catalytic domain 18 93 4.3E-9 T 14-10-2018 IPR000305 GIY-YIG endonuclease Tlie_0898 590381155a4cced523abb7da3e5356f1 494 SMART SM00278 430 449 13.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tlie_0898 590381155a4cced523abb7da3e5356f1 494 SMART SM00278 462 481 21.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tlie_1840 74fbbffcc2868b58a627c62f4c009424 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 389 53.345 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tlie_1840 74fbbffcc2868b58a627c62f4c009424 396 Gene3D G3DSA:3.40.50.1100 9 204 3.2E-188 T 14-10-2018 Tlie_1840 74fbbffcc2868b58a627c62f4c009424 396 PIRSF PIRSF001413 1 393 1.7E-168 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tlie_1840 74fbbffcc2868b58a627c62f4c009424 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tlie_1840 74fbbffcc2868b58a627c62f4c009424 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 376 2.4E-50 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tlie_1840 74fbbffcc2868b58a627c62f4c009424 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 386 1.4E-191 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tlie_1840 74fbbffcc2868b58a627c62f4c009424 396 SUPERFAMILY SSF53686 3 387 2.23E-150 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tlie_1840 74fbbffcc2868b58a627c62f4c009424 396 Gene3D G3DSA:3.40.50.1100 53 382 3.2E-188 T 14-10-2018 Tlie_0043 53486b5dfcb142bd761fd0792f742237 256 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 1.5E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0043 53486b5dfcb142bd761fd0792f742237 256 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0043 53486b5dfcb142bd761fd0792f742237 256 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 1.7E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0558 9d7e9632b7744c45279cad8bb1af68df 247 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 239 36.646 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Tlie_0558 9d7e9632b7744c45279cad8bb1af68df 247 Pfam PF02348 Cytidylyltransferase 5 213 4.3E-47 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 Tlie_0558 9d7e9632b7744c45279cad8bb1af68df 247 SUPERFAMILY SSF53448 1 241 1.13E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_0558 9d7e9632b7744c45279cad8bb1af68df 247 Gene3D G3DSA:3.90.550.10 3 241 6.6E-84 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_0558 9d7e9632b7744c45279cad8bb1af68df 247 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 232 4.4E-62 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Tlie_1755 9a28151df5c36ff4c22ef93b6be68f75 286 Pfam PF12367 Pyruvate ferredoxin oxidoreductase beta subunit C terminal 199 263 2.9E-25 T 14-10-2018 IPR032686 Pyruvate ferredoxin oxidoreductase beta subunit, C-terminal Tlie_1755 9a28151df5c36ff4c22ef93b6be68f75 286 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 52 195 1.2E-29 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tlie_1755 9a28151df5c36ff4c22ef93b6be68f75 286 Gene3D G3DSA:3.40.50.970 66 214 6.0E-23 T 14-10-2018 Tlie_1755 9a28151df5c36ff4c22ef93b6be68f75 286 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 14 271 2.2E-110 T 14-10-2018 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate Tlie_1755 9a28151df5c36ff4c22ef93b6be68f75 286 SUPERFAMILY SSF52518 10 260 2.15E-76 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_0372 563256077c2b434c84052573ac31457a 414 Hamap MF_00372 Imidazolonepropionase [hutI]. 3 413 40.876 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_0372 563256077c2b434c84052573ac31457a 414 SUPERFAMILY SSF51556 75 374 1.02E-81 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tlie_0372 563256077c2b434c84052573ac31457a 414 Pfam PF01979 Amidohydrolase family 73 410 3.7E-23 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tlie_0372 563256077c2b434c84052573ac31457a 414 TIGRFAM TIGR01224 hutI: imidazolonepropionase 33 410 2.9E-140 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_0372 563256077c2b434c84052573ac31457a 414 Gene3D G3DSA:2.30.40.10 14 410 3.8E-162 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tlie_0372 563256077c2b434c84052573ac31457a 414 Gene3D G3DSA:3.20.20.140 76 373 3.8E-162 T 14-10-2018 Tlie_0372 563256077c2b434c84052573ac31457a 414 SUPERFAMILY SSF51338 2 413 1.64E-14 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tlie_1120 39f9a1ae786f9f18dc794721f80f5e79 437 Gene3D G3DSA:3.40.50.300 2 160 2.6E-46 T 14-10-2018 Tlie_1120 39f9a1ae786f9f18dc794721f80f5e79 437 SUPERFAMILY SSF52540 2 168 9.29E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1120 39f9a1ae786f9f18dc794721f80f5e79 437 Hamap MF_00195 GTPase Der [der]. 1 437 34.366 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Tlie_1120 39f9a1ae786f9f18dc794721f80f5e79 437 Gene3D G3DSA:3.40.50.300 171 349 7.6E-47 T 14-10-2018 Tlie_1120 39f9a1ae786f9f18dc794721f80f5e79 437 Gene3D G3DSA:3.30.300.20 350 437 9.8E-19 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Tlie_1120 39f9a1ae786f9f18dc794721f80f5e79 437 Pfam PF01926 50S ribosome-binding GTPase 179 296 4.8E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_1120 39f9a1ae786f9f18dc794721f80f5e79 437 Pfam PF01926 50S ribosome-binding GTPase 4 118 5.5E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_1120 39f9a1ae786f9f18dc794721f80f5e79 437 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 434 2.0E-153 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Tlie_1120 39f9a1ae786f9f18dc794721f80f5e79 437 SUPERFAMILY SSF52540 161 434 1.3E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1120 39f9a1ae786f9f18dc794721f80f5e79 437 PIRSF PIRSF006485 1 437 1.7E-151 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Tlie_1120 39f9a1ae786f9f18dc794721f80f5e79 437 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 357 434 2.2E-19 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Tlie_1120 39f9a1ae786f9f18dc794721f80f5e79 437 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 3.5E-29 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tlie_1120 39f9a1ae786f9f18dc794721f80f5e79 437 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 345 4.1E-28 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tlie_1120 39f9a1ae786f9f18dc794721f80f5e79 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 2.5E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_1120 39f9a1ae786f9f18dc794721f80f5e79 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 89 2.5E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 42 64 3.2E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 3.2E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 80 89 3.2E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 220 229 3.2E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 261 266 3.2E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 136 153 3.2E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 Gene3D G3DSA:3.40.50.1370 11 299 1.9E-90 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 303 4.0E-27 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 Gene3D G3DSA:3.40.50.1370 137 283 1.9E-90 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 3.7E-19 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 3.7E-19 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 3.7E-19 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 137 148 3.7E-19 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 SUPERFAMILY SSF53671 2 306 3.4E-96 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 6 304 3.5E-86 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 148 7.1E-39 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Tlie_1096 2909672ff8cfab94f14a911dd95c773e 308 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 5 306 39.004 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tlie_1752 96ad115edecdb529c69aaeab46e002d4 377 Gene3D G3DSA:3.40.50.1980 175 376 3.6E-69 T 14-10-2018 Tlie_1752 96ad115edecdb529c69aaeab46e002d4 377 Pfam PF01497 Periplasmic binding protein 69 304 2.2E-21 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Tlie_1752 96ad115edecdb529c69aaeab46e002d4 377 SUPERFAMILY SSF53807 34 333 2.24E-44 T 14-10-2018 Tlie_1752 96ad115edecdb529c69aaeab46e002d4 377 Gene3D G3DSA:3.40.50.1980 27 174 4.1E-39 T 14-10-2018 Tlie_0944 7c9e6dfe9efb9882bcfb6248829d788a 947 Gene3D G3DSA:3.30.190.20 131 240 1.7E-223 T 14-10-2018 Tlie_0944 7c9e6dfe9efb9882bcfb6248829d788a 947 Gene3D G3DSA:1.20.1580.10 91 488 1.7E-223 T 14-10-2018 Tlie_0944 7c9e6dfe9efb9882bcfb6248829d788a 947 SUPERFAMILY SSF52540 612 907 2.5E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0944 7c9e6dfe9efb9882bcfb6248829d788a 947 Gene3D G3DSA:3.40.50.300 611 930 8.0E-135 T 14-10-2018 Tlie_0944 7c9e6dfe9efb9882bcfb6248829d788a 947 Gene3D G3DSA:1.20.1580.10 686 824 8.0E-135 T 14-10-2018 Tlie_0944 7c9e6dfe9efb9882bcfb6248829d788a 947 Pfam PF00005 ABC transporter 617 854 3.8E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0944 7c9e6dfe9efb9882bcfb6248829d788a 947 SMART SM00382 626 902 4.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0944 7c9e6dfe9efb9882bcfb6248829d788a 947 SMART SM00382 24 560 11.0 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0944 7c9e6dfe9efb9882bcfb6248829d788a 947 SUPERFAMILY SSF52540 11 565 3.88E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0944 7c9e6dfe9efb9882bcfb6248829d788a 947 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 914 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Tlie_0944 7c9e6dfe9efb9882bcfb6248829d788a 947 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0944 7c9e6dfe9efb9882bcfb6248829d788a 947 Gene3D G3DSA:3.40.50.300 6 589 1.7E-223 T 14-10-2018 Tlie_0944 7c9e6dfe9efb9882bcfb6248829d788a 947 Gene3D G3DSA:1.10.8.280 285 399 1.7E-223 T 14-10-2018 Tlie_0944 7c9e6dfe9efb9882bcfb6248829d788a 947 ProSitePatterns PS00211 ABC transporters family signature. 824 838 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0871 31ac2fd9b680c76521b1d50bd4240842 424 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 2 423 39.537 T 14-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 Tlie_0871 31ac2fd9b680c76521b1d50bd4240842 424 Gene3D G3DSA:2.30.40.10 15 404 3.1E-123 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tlie_0871 31ac2fd9b680c76521b1d50bd4240842 424 SUPERFAMILY SSF51338 3 422 4.64E-20 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tlie_0871 31ac2fd9b680c76521b1d50bd4240842 424 SUPERFAMILY SSF51556 56 345 7.83E-89 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tlie_0871 31ac2fd9b680c76521b1d50bd4240842 424 Gene3D G3DSA:3.20.20.140 57 340 3.1E-123 T 14-10-2018 Tlie_0871 31ac2fd9b680c76521b1d50bd4240842 424 Pfam PF01979 Amidohydrolase family 54 397 1.3E-66 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tlie_1571 f3c036855fc5099c58031bbc721e38a7 399 SUPERFAMILY SSF48452 260 365 7.21E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_1571 f3c036855fc5099c58031bbc721e38a7 399 Gene3D G3DSA:1.25.40.10 238 388 7.2E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_1571 f3c036855fc5099c58031bbc721e38a7 399 SUPERFAMILY SSF53098 79 250 3.8E-22 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_1571 f3c036855fc5099c58031bbc721e38a7 399 Pfam PF13482 RNase_H superfamily 79 248 4.9E-33 T 14-10-2018 IPR038720 YprB, ribonuclease H-like domain Tlie_1571 f3c036855fc5099c58031bbc721e38a7 399 Gene3D G3DSA:3.30.420.10 88 237 4.7E-8 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tlie_1903 ff032dda1e5548a8df90df63c95fc099 369 SUPERFAMILY SSF56281 104 336 1.09E-38 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_1903 ff032dda1e5548a8df90df63c95fc099 369 Pfam PF12706 Beta-lactamase superfamily domain 120 317 1.2E-42 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tlie_1903 ff032dda1e5548a8df90df63c95fc099 369 Gene3D G3DSA:3.60.15.10 79 369 8.1E-88 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_1429 a783c12cf289736af7adfecb0f12b5b8 483 PIRSF PIRSF006247 1 483 8.6E-180 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Tlie_1429 a783c12cf289736af7adfecb0f12b5b8 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 87 466 4.2E-100 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Tlie_1429 a783c12cf289736af7adfecb0f12b5b8 483 Pfam PF02386 Cation transport protein 53 477 4.6E-67 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Tlie_0510 81b9dcf39e73cdca10640236b5253603 291 SUPERFAMILY SSF53697 105 271 1.01E-19 T 14-10-2018 Tlie_0510 81b9dcf39e73cdca10640236b5253603 291 SUPERFAMILY SSF46689 8 81 4.66E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0510 81b9dcf39e73cdca10640236b5253603 291 Gene3D G3DSA:3.40.50.10490 103 288 2.4E-24 T 14-10-2018 Tlie_0510 81b9dcf39e73cdca10640236b5253603 291 Pfam PF01380 SIS domain 137 262 4.1E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Tlie_0510 81b9dcf39e73cdca10640236b5253603 291 Gene3D G3DSA:1.10.10.10 6 81 1.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0510 81b9dcf39e73cdca10640236b5253603 291 Pfam PF01418 Helix-turn-helix domain, rpiR family 11 78 3.0E-10 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 37 476 1.3E-157 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 Gene3D G3DSA:3.90.199.10 37 491 1.7E-206 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 Gene3D G3DSA:1.10.268.10 374 462 1.7E-206 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 SUPERFAMILY SSF101904 503 813 1.44E-85 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 14 807 0.0 T 14-10-2018 Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 809 23.161 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 SUPERFAMILY SSF56719 35 491 1.11E-173 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 509 546 8.8E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 761 807 2.7E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 613 654 5.9E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 660 706 1.6E-14 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 713 753 7.5E-4 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 559 604 0.06 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 SMART SM00434 16 469 3.1E-270 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 Gene3D G3DSA:3.30.1360.40 241 337 1.7E-206 T 14-10-2018 Tlie_0393 478f0b08caf8b7b7f3165e150710f890 815 Gene3D G3DSA:2.120.10.90 501 809 1.1E-97 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Tlie_0039 f6a1b6ce0a14be3753c1557c49797381 286 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 9 279 4.0E-85 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Tlie_0039 f6a1b6ce0a14be3753c1557c49797381 286 SUPERFAMILY SSF161098 18 270 1.5E-36 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_0039 f6a1b6ce0a14be3753c1557c49797381 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 283 2.5E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tlie_0039 f6a1b6ce0a14be3753c1557c49797381 286 Gene3D G3DSA:1.10.3720.10 54 282 3.5E-34 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_0054 afcb60dd160d502b6b12fdf97a7a7de8 168 Pfam PF02308 MgtC family 14 147 4.5E-32 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tlie_0054 afcb60dd160d502b6b12fdf97a7a7de8 168 PRINTS PR01837 MgtC/SapB protein signature 35 53 2.4E-30 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tlie_0054 afcb60dd160d502b6b12fdf97a7a7de8 168 PRINTS PR01837 MgtC/SapB protein signature 16 35 2.4E-30 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tlie_0054 afcb60dd160d502b6b12fdf97a7a7de8 168 PRINTS PR01837 MgtC/SapB protein signature 73 95 2.4E-30 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tlie_0054 afcb60dd160d502b6b12fdf97a7a7de8 168 PRINTS PR01837 MgtC/SapB protein signature 102 126 2.4E-30 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tlie_0451 0bd857cc776f679d3c83e88bf5027129 292 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0451 0bd857cc776f679d3c83e88bf5027129 292 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 3.6E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0451 0bd857cc776f679d3c83e88bf5027129 292 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 1.8E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0691 acffb11b31a23d8c9df03ed5896e2fe2 242 Pfam PF00005 ABC transporter 24 167 1.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0691 acffb11b31a23d8c9df03ed5896e2fe2 242 SMART SM00382 32 231 5.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0691 acffb11b31a23d8c9df03ed5896e2fe2 242 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0691 acffb11b31a23d8c9df03ed5896e2fe2 242 PIRSF PIRSF039137 3 240 8.6E-108 T 14-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 Tlie_0691 acffb11b31a23d8c9df03ed5896e2fe2 242 SUPERFAMILY SSF52540 5 238 4.7E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0691 acffb11b31a23d8c9df03ed5896e2fe2 242 Gene3D G3DSA:3.40.50.300 3 240 4.5E-66 T 14-10-2018 Tlie_0056 eed2935961ce762b875a88854b066111 929 Pfam PF03699 Uncharacterised protein family (UPF0182) 28 780 4.0E-296 T 14-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 Tlie_0056 eed2935961ce762b875a88854b066111 929 Hamap MF_01600 UPF0182 protein . 21 855 19.288 T 14-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 Tlie_1678 3b98f80e8e9cdfd874dd1a0c5a92f246 420 Gene3D G3DSA:3.40.718.10 2 420 3.0E-169 T 14-10-2018 Tlie_1678 3b98f80e8e9cdfd874dd1a0c5a92f246 420 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 37 416 1.3E-112 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Tlie_1678 3b98f80e8e9cdfd874dd1a0c5a92f246 420 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 11 420 7.7E-197 T 14-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Tlie_1678 3b98f80e8e9cdfd874dd1a0c5a92f246 420 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 307 326 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Tlie_1678 3b98f80e8e9cdfd874dd1a0c5a92f246 420 SMART SM01329 36 416 1.1E-178 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Tlie_1678 3b98f80e8e9cdfd874dd1a0c5a92f246 420 SUPERFAMILY SSF53659 11 420 5.58E-141 T 14-10-2018 Tlie_1707 1a6ccd16a0136f72b933e60830a6e34c 304 Gene3D G3DSA:1.10.10.10 22 99 9.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1707 1a6ccd16a0136f72b933e60830a6e34c 304 SUPERFAMILY SSF46689 24 98 6.81E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_1707 1a6ccd16a0136f72b933e60830a6e34c 304 Gene3D G3DSA:3.40.50.10490 116 301 6.5E-27 T 14-10-2018 Tlie_1707 1a6ccd16a0136f72b933e60830a6e34c 304 Pfam PF01380 SIS domain 150 275 1.2E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Tlie_1707 1a6ccd16a0136f72b933e60830a6e34c 304 SUPERFAMILY SSF53697 119 282 5.34E-18 T 14-10-2018 Tlie_1707 1a6ccd16a0136f72b933e60830a6e34c 304 Pfam PF01418 Helix-turn-helix domain, rpiR family 25 96 6.8E-10 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Tlie_0854 ae8fb40af29a4fd0ae7ea7492bf31858 577 SUPERFAMILY SSF52540 191 574 1.14E-104 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0854 ae8fb40af29a4fd0ae7ea7492bf31858 577 Gene3D G3DSA:3.30.450.90 167 304 4.5E-51 T 14-10-2018 Tlie_0854 ae8fb40af29a4fd0ae7ea7492bf31858 577 Gene3D G3DSA:3.30.300.160 81 163 4.0E-14 T 14-10-2018 Tlie_0854 ae8fb40af29a4fd0ae7ea7492bf31858 577 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 60 164 1.7E-25 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal Tlie_0854 ae8fb40af29a4fd0ae7ea7492bf31858 577 SUPERFAMILY SSF160246 23 163 2.35E-43 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Tlie_0854 ae8fb40af29a4fd0ae7ea7492bf31858 577 Pfam PF00437 Type II/IV secretion system protein 209 471 7.1E-84 T 14-10-2018 IPR001482 Type II/IV secretion system protein Tlie_0854 ae8fb40af29a4fd0ae7ea7492bf31858 577 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 99 575 9.3E-191 T 14-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 Tlie_0854 ae8fb40af29a4fd0ae7ea7492bf31858 577 Gene3D G3DSA:3.40.50.300 307 577 4.6E-116 T 14-10-2018 Tlie_0854 ae8fb40af29a4fd0ae7ea7492bf31858 577 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 399 413 - T 14-10-2018 IPR001482 Type II/IV secretion system protein Tlie_1605 9e9db41456501c568709fef21df0bef0 522 Pfam PF07905 Purine catabolism regulatory protein-like family 5 122 2.7E-28 T 14-10-2018 IPR012914 Purine catabolism PurC-like domain Tlie_1605 9e9db41456501c568709fef21df0bef0 522 Gene3D G3DSA:1.10.10.2840 382 516 1.2E-8 T 14-10-2018 Tlie_1605 9e9db41456501c568709fef21df0bef0 522 Pfam PF13556 PucR C-terminal helix-turn-helix domain 454 507 2.3E-10 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Tlie_0018 3023df9cfe9841404d6d16636a17a4b3 169 Pfam PF03773 Predicted permease 31 165 3.5E-16 T 14-10-2018 IPR005524 Predicted permease DUF318 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 SUPERFAMILY SSF50249 224 309 5.0E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 Gene3D G3DSA:2.40.50.140 221 300 3.7E-30 T 14-10-2018 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 SUPERFAMILY SSF50249 294 382 3.88E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 SMART SM00316 309 380 1.9E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 SMART SM00316 136 205 4.7E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 SMART SM00316 224 294 5.8E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 SMART SM00316 394 465 9.7E-22 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 SMART SM00316 48 120 1.3E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 Gene3D G3DSA:2.40.50.140 301 383 1.0E-29 T 14-10-2018 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 Gene3D G3DSA:2.40.50.140 384 470 8.3E-25 T 14-10-2018 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 SUPERFAMILY SSF50249 122 209 1.29E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 PRINTS PR00681 Ribosomal protein S1 signature 246 267 1.2E-42 T 14-10-2018 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 PRINTS PR00681 Ribosomal protein S1 signature 363 381 1.2E-42 T 14-10-2018 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 PRINTS PR00681 Ribosomal protein S1 signature 50 68 1.2E-42 T 14-10-2018 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 PRINTS PR00681 Ribosomal protein S1 signature 141 157 1.2E-42 T 14-10-2018 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 PRINTS PR00681 Ribosomal protein S1 signature 68 82 1.2E-42 T 14-10-2018 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 PRINTS PR00681 Ribosomal protein S1 signature 324 343 1.2E-42 T 14-10-2018 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 PRINTS PR00681 Ribosomal protein S1 signature 189 209 1.2E-42 T 14-10-2018 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 PRINTS PR00681 Ribosomal protein S1 signature 117 136 1.2E-42 T 14-10-2018 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 Gene3D G3DSA:2.40.50.140 35 130 1.7E-15 T 14-10-2018 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 SUPERFAMILY SSF50249 382 467 1.57E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 Pfam PF00575 S1 RNA binding domain 49 111 5.9E-9 T 14-10-2018 IPR003029 S1 domain GO:0003676 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 Pfam PF00575 S1 RNA binding domain 308 379 2.2E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 Pfam PF00575 S1 RNA binding domain 139 205 4.0E-9 T 14-10-2018 IPR003029 S1 domain GO:0003676 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 Pfam PF00575 S1 RNA binding domain 223 294 1.8E-24 T 14-10-2018 IPR003029 S1 domain GO:0003676 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 Pfam PF00575 S1 RNA binding domain 394 464 1.2E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 Gene3D G3DSA:2.40.50.140 131 219 1.7E-9 T 14-10-2018 Tlie_0878 ede31fbc63ba63dba68f2056f30766e9 514 SUPERFAMILY SSF50249 35 142 2.2E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0516 5c2e8c57db4f71a23845756961433c46 139 Pfam PF13380 CoA binding domain 17 132 3.9E-29 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Tlie_0516 5c2e8c57db4f71a23845756961433c46 139 SMART SM00881 11 106 8.7E-17 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Tlie_0516 5c2e8c57db4f71a23845756961433c46 139 Gene3D G3DSA:3.40.50.720 3 137 1.5E-37 T 14-10-2018 Tlie_0516 5c2e8c57db4f71a23845756961433c46 139 SUPERFAMILY SSF51735 7 134 7.88E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1334 bcf0d59e95e34d948a2b50dc7bc96994 350 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 320 8.5E-47 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tlie_1307 0702083ac67ac24633b9eff45c6468a2 257 Pfam PF02649 Type I GTP cyclohydrolase folE2 1 249 2.3E-97 T 14-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Tlie_1307 0702083ac67ac24633b9eff45c6468a2 257 TIGRFAM TIGR00294 TIGR00294: GTP cyclohydrolase 12 250 9.0E-37 T 14-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Tlie_1307 0702083ac67ac24633b9eff45c6468a2 257 Gene3D G3DSA:3.10.270.10 1 252 7.7E-98 T 14-10-2018 Tlie_1307 0702083ac67ac24633b9eff45c6468a2 257 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 1 254 36.821 T 14-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 SUPERFAMILY SSF53784 1 312 4.45E-112 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 Gene3D G3DSA:3.40.50.460 139 251 1.9E-107 T 14-10-2018 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 42.686 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 PIRSF PIRSF000532 1 318 2.9E-112 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 Pfam PF00365 Phosphofructokinase 3 275 6.2E-103 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 Gene3D G3DSA:3.40.50.450 3 281 1.9E-107 T 14-10-2018 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 4.2E-78 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 4.2E-78 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 4.2E-78 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 4.2E-78 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 4.2E-78 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 4.2E-78 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 4.2E-78 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 4.2E-78 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 4.2E-78 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tlie_0575 2cbfc4436b5fc60afb8da3b154040bb3 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 297 1.3E-114 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Tlie_1483 8013cd3271c92b97df5630e24a099293 129 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 9 127 17.791 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Tlie_1483 8013cd3271c92b97df5630e24a099293 129 TIGRFAM TIGR00494 crcB: protein CrcB 10 124 5.0E-26 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Tlie_1483 8013cd3271c92b97df5630e24a099293 129 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 11 122 1.8E-22 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Tlie_0795 e463e9896a59d703a43ea0b98c28dc3c 150 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 123 1.9E-30 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Tlie_0795 e463e9896a59d703a43ea0b98c28dc3c 150 SUPERFAMILY SSF53927 7 145 2.34E-45 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tlie_0795 e463e9896a59d703a43ea0b98c28dc3c 150 PIRSF PIRSF006019 1 150 1.8E-57 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Tlie_0795 e463e9896a59d703a43ea0b98c28dc3c 150 Gene3D G3DSA:3.40.140.10 1 150 1.5E-50 T 14-10-2018 Tlie_0795 e463e9896a59d703a43ea0b98c28dc3c 150 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 78 113 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Tlie_0551 00b2ac08c52c2b0a30a8d23d5ad36f97 161 PIRSF PIRSF006118 1 161 1.1E-56 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tlie_0551 00b2ac08c52c2b0a30a8d23d5ad36f97 161 SUPERFAMILY SSF56784 1 151 3.55E-41 T 14-10-2018 IPR036412 HAD-like superfamily Tlie_0551 00b2ac08c52c2b0a30a8d23d5ad36f97 161 Gene3D G3DSA:3.40.50.1000 1 160 2.0E-54 T 14-10-2018 IPR023214 HAD superfamily Tlie_0551 00b2ac08c52c2b0a30a8d23d5ad36f97 161 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 2 154 2.4E-46 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tlie_0551 00b2ac08c52c2b0a30a8d23d5ad36f97 161 Pfam PF00702 haloacid dehalogenase-like hydrolase 38 112 1.1E-8 T 14-10-2018 Tlie_1010 8eeca8abc88888cdb40a5e3619fa289f 621 Pfam PF02780 Transketolase, C-terminal domain 495 614 4.2E-20 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Tlie_1010 8eeca8abc88888cdb40a5e3619fa289f 621 Gene3D G3DSA:3.40.50.920 492 620 2.0E-28 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_1010 8eeca8abc88888cdb40a5e3619fa289f 621 Gene3D G3DSA:3.40.50.970 314 483 9.7E-63 T 14-10-2018 Tlie_1010 8eeca8abc88888cdb40a5e3619fa289f 621 SUPERFAMILY SSF52518 5 378 3.19E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1010 8eeca8abc88888cdb40a5e3619fa289f 621 SUPERFAMILY SSF52518 314 500 9.25E-50 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1010 8eeca8abc88888cdb40a5e3619fa289f 621 ProSitePatterns PS00801 Transketolase signature 1. 29 48 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tlie_1010 8eeca8abc88888cdb40a5e3619fa289f 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 3 620 38.144 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tlie_1010 8eeca8abc88888cdb40a5e3619fa289f 621 Pfam PF02779 Transketolase, pyrimidine binding domain 316 476 1.1E-35 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tlie_1010 8eeca8abc88888cdb40a5e3619fa289f 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 4 278 8.3E-104 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tlie_1010 8eeca8abc88888cdb40a5e3619fa289f 621 SUPERFAMILY SSF52922 488 617 1.31E-23 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_1010 8eeca8abc88888cdb40a5e3619fa289f 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 4 615 2.8E-202 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tlie_1010 8eeca8abc88888cdb40a5e3619fa289f 621 SMART SM00861 316 479 3.0E-59 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tlie_0524 60736addbbcaeaadfaf19b45fbf4e593 170 SUPERFAMILY SSF51306 25 169 1.69E-62 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Tlie_0524 60736addbbcaeaadfaf19b45fbf4e593 170 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 11 163 3.9E-54 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Tlie_0524 60736addbbcaeaadfaf19b45fbf4e593 170 ProSitePatterns PS00501 Signal peptidases I serine active site. 36 43 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Tlie_0524 60736addbbcaeaadfaf19b45fbf4e593 170 Pfam PF00717 Peptidase S24-like 33 102 1.1E-19 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Tlie_0524 60736addbbcaeaadfaf19b45fbf4e593 170 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 27 43 8.9E-23 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Tlie_0524 60736addbbcaeaadfaf19b45fbf4e593 170 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 91 8.9E-23 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Tlie_0524 60736addbbcaeaadfaf19b45fbf4e593 170 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 123 142 8.9E-23 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Tlie_0524 60736addbbcaeaadfaf19b45fbf4e593 170 ProSitePatterns PS00761 Signal peptidases I signature 3. 128 141 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Tlie_0524 60736addbbcaeaadfaf19b45fbf4e593 170 ProSitePatterns PS00760 Signal peptidases I lysine active site. 81 93 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 Tlie_1422 35af9c23a0c71ca43c304697f46ad326 186 Pfam PF01782 RimM N-terminal domain 19 103 1.1E-21 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 Tlie_1422 35af9c23a0c71ca43c304697f46ad326 186 Pfam PF05239 PRC-barrel domain 115 179 1.3E-4 T 14-10-2018 IPR027275 PRC-barrel domain Tlie_1422 35af9c23a0c71ca43c304697f46ad326 186 SUPERFAMILY SSF50346 113 184 5.49E-13 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Tlie_1422 35af9c23a0c71ca43c304697f46ad326 186 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 16 184 23.067 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Tlie_1422 35af9c23a0c71ca43c304697f46ad326 186 Gene3D G3DSA:2.40.30.60 16 108 6.6E-20 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Tlie_1422 35af9c23a0c71ca43c304697f46ad326 186 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 17 183 2.8E-38 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Tlie_1422 35af9c23a0c71ca43c304697f46ad326 186 SUPERFAMILY SSF50447 17 104 4.36E-17 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tlie_1422 35af9c23a0c71ca43c304697f46ad326 186 Gene3D G3DSA:2.30.30.240 109 186 2.0E-13 T 14-10-2018 Tlie_0123 01f418511af46293c53461e10ab9193e 153 SUPERFAMILY SSF50341 3 140 6.02E-35 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Tlie_0123 01f418511af46293c53461e10ab9193e 153 Gene3D G3DSA:2.40.50.180 22 134 1.3E-33 T 14-10-2018 Tlie_0123 01f418511af46293c53461e10ab9193e 153 Pfam PF01584 CheW-like domain 4 140 2.6E-34 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tlie_0123 01f418511af46293c53461e10ab9193e 153 Gene3D G3DSA:2.30.30.40 5 133 1.3E-33 T 14-10-2018 Tlie_0123 01f418511af46293c53461e10ab9193e 153 SMART SM00260 1 139 1.1E-27 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tlie_1577 8ba3265af21f86639e8f70dc7276878a 438 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 430 7.8E-95 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_1577 8ba3265af21f86639e8f70dc7276878a 438 PIRSF PIRSF006066 1 436 5.9E-103 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_1577 8ba3265af21f86639e8f70dc7276878a 438 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 421 1.6E-82 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tlie_0375 060e99526f8cb2d11e75015962030d65 262 SUPERFAMILY SSF52096 9 261 8.0E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tlie_0375 060e99526f8cb2d11e75015962030d65 262 Gene3D G3DSA:1.10.12.10 204 262 2.9E-16 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Tlie_0375 060e99526f8cb2d11e75015962030d65 262 Gene3D G3DSA:3.90.226.10 10 203 2.7E-59 T 14-10-2018 Tlie_0375 060e99526f8cb2d11e75015962030d65 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 261 3.9E-61 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Tlie_0742 531e3ecd3a05e937b44eda8f34025dee 181 Gene3D G3DSA:3.40.1510.10 43 181 1.5E-42 T 14-10-2018 IPR036482 Hut operon regulatory protein HutP superfamily Tlie_0742 531e3ecd3a05e937b44eda8f34025dee 181 Pfam PF09021 HutP 51 179 2.5E-41 T 14-10-2018 IPR015111 Hut operon regulatory protein HutP Tlie_0742 531e3ecd3a05e937b44eda8f34025dee 181 SUPERFAMILY SSF111064 49 181 2.75E-27 T 14-10-2018 IPR036482 Hut operon regulatory protein HutP superfamily Tlie_1094 e128de0ee9d92f3dab53d7a7e6f09235 262 Gene3D G3DSA:3.40.50.80 105 219 2.2E-10 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tlie_1094 e128de0ee9d92f3dab53d7a7e6f09235 262 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 221 257 3.8E-15 T 14-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Tlie_1094 e128de0ee9d92f3dab53d7a7e6f09235 262 SUPERFAMILY SSF63380 11 103 7.19E-13 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tlie_1094 e128de0ee9d92f3dab53d7a7e6f09235 262 Gene3D G3DSA:2.40.30.10 8 101 5.7E-16 T 14-10-2018 Tlie_1094 e128de0ee9d92f3dab53d7a7e6f09235 262 SUPERFAMILY SSF52343 98 257 2.1E-19 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tlie_1094 e128de0ee9d92f3dab53d7a7e6f09235 262 PIRSF PIRSF006816 7 262 2.0E-49 T 14-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 Tlie_1094 e128de0ee9d92f3dab53d7a7e6f09235 262 Pfam PF00970 Oxidoreductase FAD-binding domain 20 101 1.4E-4 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Tlie_1094 e128de0ee9d92f3dab53d7a7e6f09235 262 Gene3D G3DSA:2.10.240.10 221 259 2.8E-14 T 14-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily Tlie_1007 c32907cf463668d0508476a1b1976602 556 SUPERFAMILY SSF52540 1 522 2.13E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1007 c32907cf463668d0508476a1b1976602 556 PIRSF PIRSF003128 1 555 2.6E-108 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Tlie_1007 c32907cf463668d0508476a1b1976602 556 Gene3D G3DSA:3.40.50.300 341 552 2.9E-38 T 14-10-2018 Tlie_1007 c32907cf463668d0508476a1b1976602 556 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 25 38 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tlie_1007 c32907cf463668d0508476a1b1976602 556 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 510 1.9E-16 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Tlie_1007 c32907cf463668d0508476a1b1976602 556 Gene3D G3DSA:3.40.50.300 1 274 4.8E-36 T 14-10-2018 Tlie_1007 c32907cf463668d0508476a1b1976602 556 SMART SM00382 21 513 3.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1614 2a9ca307bb2e8aa273935ba17ca119b4 154 SUPERFAMILY SSF53163 1 150 7.32E-25 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily Tlie_1614 2a9ca307bb2e8aa273935ba17ca119b4 154 Gene3D G3DSA:3.40.50.1450 1 145 6.9E-24 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily Tlie_1614 2a9ca307bb2e8aa273935ba17ca119b4 154 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 143 4.9E-18 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tlie_0446 485b09d56147edb89324001f8bb12e7e 141 SMART SM00649 9 140 3.7E-92 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Tlie_0446 485b09d56147edb89324001f8bb12e7e 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 140 4.8E-68 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0446 485b09d56147edb89324001f8bb12e7e 141 SUPERFAMILY SSF54747 3 72 2.75E-31 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Tlie_0446 485b09d56147edb89324001f8bb12e7e 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 32.816 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Tlie_0446 485b09d56147edb89324001f8bb12e7e 141 Gene3D G3DSA:3.30.1550.10 2 71 7.1E-36 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Tlie_0446 485b09d56147edb89324001f8bb12e7e 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 1.2E-32 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal Tlie_0446 485b09d56147edb89324001f8bb12e7e 141 Gene3D G3DSA:1.10.10.2720 72 141 3.6E-32 T 14-10-2018 Tlie_0446 485b09d56147edb89324001f8bb12e7e 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 5.9E-29 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Tlie_0446 485b09d56147edb89324001f8bb12e7e 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 1.0E-11 T 14-10-2018 Tlie_0446 485b09d56147edb89324001f8bb12e7e 141 SUPERFAMILY SSF46906 67 140 2.75E-29 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Tlie_0681 75080c749d3cde2e247e2aa8e53843fc 347 Gene3D G3DSA:3.30.420.40 6 321 2.1E-129 T 14-10-2018 Tlie_0681 75080c749d3cde2e247e2aa8e53843fc 347 SUPERFAMILY SSF53067 142 327 5.44E-49 T 14-10-2018 Tlie_0681 75080c749d3cde2e247e2aa8e53843fc 347 SUPERFAMILY SSF53067 3 140 4.02E-39 T 14-10-2018 Tlie_0681 75080c749d3cde2e247e2aa8e53843fc 347 Gene3D G3DSA:3.90.640.10 179 253 2.1E-129 T 14-10-2018 Tlie_0681 75080c749d3cde2e247e2aa8e53843fc 347 Pfam PF06723 MreB/Mbl protein 5 329 1.2E-145 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tlie_0681 75080c749d3cde2e247e2aa8e53843fc 347 Gene3D G3DSA:3.30.420.40 147 311 2.1E-129 T 14-10-2018 Tlie_0681 75080c749d3cde2e247e2aa8e53843fc 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 4 330 1.1E-144 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tlie_0681 75080c749d3cde2e247e2aa8e53843fc 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 125 144 4.3E-57 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tlie_0681 75080c749d3cde2e247e2aa8e53843fc 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 294 320 4.3E-57 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tlie_0681 75080c749d3cde2e247e2aa8e53843fc 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 41 59 4.3E-57 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tlie_0681 75080c749d3cde2e247e2aa8e53843fc 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 61 84 4.3E-57 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tlie_0681 75080c749d3cde2e247e2aa8e53843fc 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 180 200 4.3E-57 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tlie_1729 f9666ed65fe912d2b5e567c387236f14 430 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 422 8.3E-134 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_1729 f9666ed65fe912d2b5e567c387236f14 430 PIRSF PIRSF006066 1 428 4.2E-154 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_1729 f9666ed65fe912d2b5e567c387236f14 430 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 1.1E-120 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tlie_1499 221b62661ef3f53aac4aa2c2324c6441 208 Pfam PF01813 ATP synthase subunit D 11 201 1.2E-53 T 14-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1499 221b62661ef3f53aac4aa2c2324c6441 208 Hamap MF_00271 V-type ATP synthase subunit D [atpD]. 2 206 21.001 T 14-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1499 221b62661ef3f53aac4aa2c2324c6441 208 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 4 206 1.7E-45 T 14-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0317 031b344a46f8e532a48da2934590da21 218 SUPERFAMILY SSF52499 18 215 2.62E-29 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Tlie_0317 031b344a46f8e532a48da2934590da21 218 Pfam PF00857 Isochorismatase family 19 194 6.9E-18 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Tlie_0317 031b344a46f8e532a48da2934590da21 218 Gene3D G3DSA:3.40.50.850 15 217 1.4E-33 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Tlie_0604 ad1222b7bd53787ab5dd7e74491da995 208 Gene3D G3DSA:3.40.50.300 3 157 3.4E-26 T 14-10-2018 Tlie_0604 ad1222b7bd53787ab5dd7e74491da995 208 SUPERFAMILY SSF52540 2 109 2.57E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0604 ad1222b7bd53787ab5dd7e74491da995 208 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 5 111 2.4E-17 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 79 2.9E-18 T 14-10-2018 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 658 669 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_1249 43d887abea8159f23dfd184668c226da 1241 SUPERFAMILY SSF51971 194 436 3.0E-70 T 14-10-2018 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 Gene3D G3DSA:3.40.50.740 753 1209 7.7E-141 T 14-10-2018 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 SUPERFAMILY SSF54862 558 678 1.26E-23 T 14-10-2018 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 SMART SM00926 687 745 1.8E-9 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 688 744 7.9E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 SUPERFAMILY SSF53706 662 1226 1.27E-156 T 14-10-2018 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 Pfam PF12838 4Fe-4S dicluster domain 614 672 1.2E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_1249 43d887abea8159f23dfd184668c226da 1241 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 101 181 3.4E-17 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 Gene3D G3DSA:3.50.50.60 199 493 2.1E-66 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1249 43d887abea8159f23dfd184668c226da 1241 PRINTS PR00419 Adrenodoxin reductase family signature 328 342 2.3E-18 T 14-10-2018 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 PRINTS PR00419 Adrenodoxin reductase family signature 197 219 2.3E-18 T 14-10-2018 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 PRINTS PR00419 Adrenodoxin reductase family signature 220 233 2.3E-18 T 14-10-2018 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 PRINTS PR00419 Adrenodoxin reductase family signature 262 272 2.3E-18 T 14-10-2018 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 Gene3D G3DSA:3.50.50.60 294 435 2.1E-66 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1249 43d887abea8159f23dfd184668c226da 1241 Gene3D G3DSA:3.30.70.20 596 676 6.3E-21 T 14-10-2018 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 197 486 1.6E-36 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 Gene3D G3DSA:3.10.20.740 4 123 8.2E-34 T 14-10-2018 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 Pfam PF00384 Molybdopterin oxidoreductase 748 1168 2.8E-71 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 Gene3D G3DSA:2.20.25.90 688 745 1.3E-14 T 14-10-2018 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 SUPERFAMILY SSF46548 100 206 5.75E-19 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 SUPERFAMILY SSF54292 5 102 4.84E-28 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tlie_1249 43d887abea8159f23dfd184668c226da 1241 Gene3D G3DSA:3.40.228.10 826 1025 7.7E-141 T 14-10-2018 Tlie_1054 f331da80faecda80c9e7898b045c1416 369 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 363 1.9E-92 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Tlie_1054 f331da80faecda80c9e7898b045c1416 369 Gene3D G3DSA:3.40.640.10 47 273 3.0E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1054 f331da80faecda80c9e7898b045c1416 369 Gene3D G3DSA:3.90.1150.10 24 357 3.0E-97 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1054 f331da80faecda80c9e7898b045c1416 369 Pfam PF00155 Aminotransferase class I and II 34 358 1.0E-54 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tlie_1054 f331da80faecda80c9e7898b045c1416 369 SUPERFAMILY SSF53383 19 364 6.78E-82 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1054 f331da80faecda80c9e7898b045c1416 369 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 364 48.725 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 22 414 2.9E-134 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 218 250 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 Pfam PF00815 Histidinol dehydrogenase 10 414 1.4E-139 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 Gene3D G3DSA:3.40.50.1980 19 221 9.6E-109 T 14-10-2018 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 PIRSF PIRSF000099 2 418 4.5E-129 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 415 35.262 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 PRINTS PR00083 Histidinol dehydrogenase signature 124 150 1.5E-73 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 PRINTS PR00083 Histidinol dehydrogenase signature 308 333 1.5E-73 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 PRINTS PR00083 Histidinol dehydrogenase signature 218 239 1.5E-73 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 PRINTS PR00083 Histidinol dehydrogenase signature 22 46 1.5E-73 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 PRINTS PR00083 Histidinol dehydrogenase signature 189 214 1.5E-73 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 PRINTS PR00083 Histidinol dehydrogenase signature 159 185 1.5E-73 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 PRINTS PR00083 Histidinol dehydrogenase signature 349 367 1.5E-73 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 PRINTS PR00083 Histidinol dehydrogenase signature 240 259 1.5E-73 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 SUPERFAMILY SSF53720 19 415 1.79E-59 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Tlie_0836 eecff84bd309b9196daf0ccda40f47ba 419 Gene3D G3DSA:3.40.50.1980 222 337 9.6E-109 T 14-10-2018 Tlie_1479 e6d926bd7c409e2a8c7d804b1d5011dd 373 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 15 366 1.3E-129 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Tlie_1479 e6d926bd7c409e2a8c7d804b1d5011dd 373 PIRSF PIRSF015658 3 373 1.3E-152 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Tlie_1479 e6d926bd7c409e2a8c7d804b1d5011dd 373 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 15 370 9.2E-149 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 Gene3D G3DSA:2.40.50.150 769 909 2.3E-60 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 Gene3D G3DSA:2.40.270.10 958 1032 1.2E-24 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 Pfam PF04560 RNA polymerase Rpb2, domain 7 1056 1130 2.7E-25 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 SUPERFAMILY SSF64484 14 1135 0.0 T 14-10-2018 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 Gene3D G3DSA:2.40.50.100 657 729 1.9E-27 T 14-10-2018 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 ProSitePatterns PS01166 RNA polymerases beta chain signature. 901 913 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 Pfam PF10385 RNA polymerase beta subunit external 1 domain 534 599 3.1E-22 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 Pfam PF00562 RNA polymerase Rpb2, domain 6 661 1054 3.7E-161 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 Gene3D G3DSA:3.90.1100.10 592 656 1.8E-20 T 14-10-2018 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 Gene3D G3DSA:2.40.270.10 730 768 7.0E-7 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 10 875 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 Gene3D G3DSA:3.90.1100.10 19 158 6.7E-48 T 14-10-2018 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 Gene3D G3DSA:3.90.1100.10 385 584 4.7E-69 T 14-10-2018 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 14 1132 12.294 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 Pfam PF04561 RNA polymerase Rpb2, domain 2 294 395 3.1E-21 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 Pfam PF04565 RNA polymerase Rpb2, domain 3 455 523 1.8E-29 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 Gene3D G3DSA:3.90.1800.10 1042 1092 5.3E-10 T 14-10-2018 Tlie_0638 878e4259253714518a0fc2c96a39c36f 1191 Pfam PF04563 RNA polymerase beta subunit 28 442 3.8E-22 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_1911 a987a0ef8290b1021d58f72eeb6a06e0 350 Pfam PF05145 Transition state regulatory protein AbrB 137 345 3.1E-39 T 14-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 Tlie_1911 a987a0ef8290b1021d58f72eeb6a06e0 350 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 3 159 8.2E-30 T 14-10-2018 IPR017516 AbrB duplication Tlie_1911 a987a0ef8290b1021d58f72eeb6a06e0 350 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 190 345 2.1E-37 T 14-10-2018 IPR017516 AbrB duplication Tlie_1911 a987a0ef8290b1021d58f72eeb6a06e0 350 PIRSF PIRSF038991 177 349 2.0E-36 T 14-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 Tlie_1911 a987a0ef8290b1021d58f72eeb6a06e0 350 PIRSF PIRSF038991 1 168 1.2E-33 T 14-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 Tlie_1297 bedb916c0bfb9278e56ba9fcb7599b00 368 Gene3D G3DSA:3.40.50.11750 27 260 5.0E-111 T 14-10-2018 Tlie_1297 bedb916c0bfb9278e56ba9fcb7599b00 368 Pfam PF01924 Hydrogenase formation hypA family 23 362 5.0E-144 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Tlie_1297 bedb916c0bfb9278e56ba9fcb7599b00 368 PIRSF PIRSF005622 1 367 9.4E-144 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Tlie_1297 bedb916c0bfb9278e56ba9fcb7599b00 368 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 11 365 2.2E-130 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Tlie_1297 bedb916c0bfb9278e56ba9fcb7599b00 368 Gene3D G3DSA:1.10.10.2140 315 365 8.0E-25 T 14-10-2018 Tlie_1297 bedb916c0bfb9278e56ba9fcb7599b00 368 Gene3D G3DSA:3.40.50.11740 63 300 5.0E-111 T 14-10-2018 Tlie_0368 da5048ccec868b7623a5a5b09a6881f6 226 PIRSF PIRSF000441 1 222 1.1E-74 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Tlie_0368 da5048ccec868b7623a5a5b09a6881f6 226 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 174 5.7E-66 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Tlie_0368 da5048ccec868b7623a5a5b09a6881f6 226 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 159 8.5E-10 T 14-10-2018 IPR001451 Hexapeptide repeat Tlie_0368 da5048ccec868b7623a5a5b09a6881f6 226 Gene3D G3DSA:1.10.3130.10 1 73 2.6E-21 T 14-10-2018 Tlie_0368 da5048ccec868b7623a5a5b09a6881f6 226 Gene3D G3DSA:2.160.10.10 74 197 4.1E-35 T 14-10-2018 Tlie_0368 da5048ccec868b7623a5a5b09a6881f6 226 SUPERFAMILY SSF51161 8 178 3.33E-49 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Tlie_1792 d953d20eee1b5da254a3a922be27227c 540 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 320 3.4E-31 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Tlie_1792 d953d20eee1b5da254a3a922be27227c 540 SUPERFAMILY SSF52467 157 347 2.24E-38 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Tlie_1792 d953d20eee1b5da254a3a922be27227c 540 SUPERFAMILY SSF52518 368 534 8.94E-41 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1792 d953d20eee1b5da254a3a922be27227c 540 Gene3D G3DSA:3.40.50.970 2 182 6.6E-62 T 14-10-2018 Tlie_1792 d953d20eee1b5da254a3a922be27227c 540 Gene3D G3DSA:3.40.50.970 348 539 1.8E-41 T 14-10-2018 Tlie_1792 d953d20eee1b5da254a3a922be27227c 540 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 169 1.1E-54 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Tlie_1792 d953d20eee1b5da254a3a922be27227c 540 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 398 533 4.4E-27 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tlie_1792 d953d20eee1b5da254a3a922be27227c 540 Gene3D G3DSA:3.40.50.1220 185 347 1.2E-41 T 14-10-2018 Tlie_1792 d953d20eee1b5da254a3a922be27227c 540 SUPERFAMILY SSF52518 2 173 3.83E-52 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1868 6175046b97afbbe9f7d50d3f4c165196 243 Gene3D G3DSA:3.40.50.1220 13 232 1.4E-79 T 14-10-2018 Tlie_1868 6175046b97afbbe9f7d50d3f4c165196 243 SUPERFAMILY SSF52467 5 239 5.61E-79 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Tlie_1868 6175046b97afbbe9f7d50d3f4c165196 243 Pfam PF02146 Sir2 family 22 191 7.7E-47 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 Tlie_1868 6175046b97afbbe9f7d50d3f4c165196 243 Gene3D G3DSA:3.30.1600.10 31 161 1.4E-79 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily Tlie_0802 29f7fd61edc40d61b382ab7f2cdb181d 454 Gene3D G3DSA:3.30.565.10 317 450 7.6E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0802 29f7fd61edc40d61b382ab7f2cdb181d 454 Pfam PF07730 Histidine kinase 251 315 2.7E-9 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Tlie_0802 29f7fd61edc40d61b382ab7f2cdb181d 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 447 7.9E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_0802 29f7fd61edc40d61b382ab7f2cdb181d 454 SUPERFAMILY SSF55874 323 445 1.96E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0570 7712b7a91267b0c60feac579909f2467 366 Pfam PF00534 Glycosyl transferases group 1 165 328 2.0E-35 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tlie_0570 7712b7a91267b0c60feac579909f2467 366 Gene3D G3DSA:3.40.50.2000 153 330 5.9E-57 T 14-10-2018 Tlie_0570 7712b7a91267b0c60feac579909f2467 366 Gene3D G3DSA:3.40.50.2000 34 152 5.9E-57 T 14-10-2018 Tlie_0570 7712b7a91267b0c60feac579909f2467 366 SUPERFAMILY SSF53756 21 359 3.07E-65 T 14-10-2018 Tlie_0570 7712b7a91267b0c60feac579909f2467 366 Pfam PF13439 Glycosyltransferase Family 4 34 156 2.6E-10 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tlie_1450 5ba7a477e861a0833ad4fd4d0963969f 250 SMART SM00346 1 91 2.7E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Tlie_1450 5ba7a477e861a0833ad4fd4d0963969f 250 Pfam PF09339 IclR helix-turn-helix domain 3 54 2.4E-8 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Tlie_1450 5ba7a477e861a0833ad4fd4d0963969f 250 Pfam PF01614 Bacterial transcriptional regulator 126 244 5.3E-24 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Tlie_1450 5ba7a477e861a0833ad4fd4d0963969f 250 SUPERFAMILY SSF46785 1 72 3.4E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1450 5ba7a477e861a0833ad4fd4d0963969f 250 Gene3D G3DSA:3.30.450.40 72 250 5.8E-41 T 14-10-2018 IPR029016 GAF-like domain superfamily Tlie_1450 5ba7a477e861a0833ad4fd4d0963969f 250 SUPERFAMILY SSF55781 59 247 1.77E-38 T 14-10-2018 Tlie_1450 5ba7a477e861a0833ad4fd4d0963969f 250 Gene3D G3DSA:1.10.10.10 1 71 2.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1440 8c5f172c80ff69530b101de00eb950fb 289 SUPERFAMILY SSF46689 4 81 1.02E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_1440 8c5f172c80ff69530b101de00eb950fb 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 77 1.3E-16 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Tlie_1440 8c5f172c80ff69530b101de00eb950fb 289 Pfam PF01380 SIS domain 135 251 9.7E-10 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Tlie_1440 8c5f172c80ff69530b101de00eb950fb 289 Gene3D G3DSA:1.10.10.10 1 78 1.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1440 8c5f172c80ff69530b101de00eb950fb 289 SUPERFAMILY SSF53697 98 263 4.25E-20 T 14-10-2018 Tlie_1440 8c5f172c80ff69530b101de00eb950fb 289 Gene3D G3DSA:3.40.50.10490 93 278 3.7E-26 T 14-10-2018 Tlie_0931 79c2a99520c98180bebe7982d545f955 187 Pfam PF08905 Domain of unknown function (DUF1850) 52 133 1.3E-13 T 14-10-2018 IPR015001 Protein of unknown function DUF1850 Tlie_0979 fd0c1036f47ff29caf1204a6abf38000 479 Pfam PF01225 Mur ligase family, catalytic domain 14 111 1.4E-17 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Tlie_0979 fd0c1036f47ff29caf1204a6abf38000 479 Gene3D G3DSA:3.40.50.720 12 101 7.6E-26 T 14-10-2018 Tlie_0979 fd0c1036f47ff29caf1204a6abf38000 479 SUPERFAMILY SSF51984 12 100 4.45E-22 T 14-10-2018 Tlie_0979 fd0c1036f47ff29caf1204a6abf38000 479 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 13 461 5.6E-141 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0979 fd0c1036f47ff29caf1204a6abf38000 479 Gene3D G3DSA:3.40.1190.10 102 316 2.1E-65 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tlie_0979 fd0c1036f47ff29caf1204a6abf38000 479 Pfam PF08245 Mur ligase middle domain 118 298 9.0E-24 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tlie_0979 fd0c1036f47ff29caf1204a6abf38000 479 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 11 467 36.305 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_0979 fd0c1036f47ff29caf1204a6abf38000 479 Gene3D G3DSA:3.90.190.20 317 474 1.9E-49 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tlie_0979 fd0c1036f47ff29caf1204a6abf38000 479 Pfam PF02875 Mur ligase family, glutamate ligase domain 320 405 8.4E-21 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tlie_0979 fd0c1036f47ff29caf1204a6abf38000 479 SUPERFAMILY SSF53244 318 464 1.45E-44 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tlie_0979 fd0c1036f47ff29caf1204a6abf38000 479 SUPERFAMILY SSF53623 99 317 6.28E-57 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tlie_1444 0c2032a71ef86279d964cb69dfe4c0d7 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 418 32.874 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Tlie_1444 0c2032a71ef86279d964cb69dfe4c0d7 422 Gene3D G3DSA:3.40.50.800 328 420 1.1E-27 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Tlie_1444 0c2032a71ef86279d964cb69dfe4c0d7 422 PIRSF PIRSF001549 1 420 3.8E-125 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Tlie_1444 0c2032a71ef86279d964cb69dfe4c0d7 422 SUPERFAMILY SSF52954 328 420 4.38E-23 T 14-10-2018 Tlie_1444 0c2032a71ef86279d964cb69dfe4c0d7 422 Gene3D G3DSA:3.30.930.10 2 321 2.1E-116 T 14-10-2018 Tlie_1444 0c2032a71ef86279d964cb69dfe4c0d7 422 SUPERFAMILY SSF55681 4 319 1.85E-95 T 14-10-2018 Tlie_1444 0c2032a71ef86279d964cb69dfe4c0d7 422 Pfam PF03129 Anticodon binding domain 330 418 1.5E-15 T 14-10-2018 IPR004154 Anticodon-binding Tlie_1444 0c2032a71ef86279d964cb69dfe4c0d7 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 408 2.5E-153 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Tlie_1444 0c2032a71ef86279d964cb69dfe4c0d7 422 Pfam PF13393 Histidyl-tRNA synthetase 9 311 7.4E-43 T 14-10-2018 Tlie_0835 f61a1eba70d2a9363d39b2b81b10374c 402 Pfam PF13393 Histidyl-tRNA synthetase 13 310 3.1E-54 T 14-10-2018 Tlie_0835 f61a1eba70d2a9363d39b2b81b10374c 402 SUPERFAMILY SSF55681 3 313 7.9E-38 T 14-10-2018 Tlie_0835 f61a1eba70d2a9363d39b2b81b10374c 402 PIRSF PIRSF001549 1 386 1.0E-43 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Tlie_0835 f61a1eba70d2a9363d39b2b81b10374c 402 Gene3D G3DSA:3.30.930.10 1 313 2.9E-55 T 14-10-2018 Tlie_1015 2a30fd4cf069162bee73f1966555099c 755 SUPERFAMILY SSF52540 365 643 9.74E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1015 2a30fd4cf069162bee73f1966555099c 755 SUPERFAMILY SSF46785 677 741 2.1E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1015 2a30fd4cf069162bee73f1966555099c 755 Gene3D G3DSA:1.10.10.10 679 741 1.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1015 2a30fd4cf069162bee73f1966555099c 755 Pfam PF09397 Ftsk gamma domain 677 737 7.3E-24 T 14-10-2018 IPR018541 FtsK gamma domain Tlie_1015 2a30fd4cf069162bee73f1966555099c 755 Gene3D G3DSA:3.30.980.40 281 386 2.6E-31 T 14-10-2018 Tlie_1015 2a30fd4cf069162bee73f1966555099c 755 SMART SM00843 675 740 1.7E-29 T 14-10-2018 IPR018541 FtsK gamma domain Tlie_1015 2a30fd4cf069162bee73f1966555099c 755 Gene3D G3DSA:3.40.50.300 387 662 4.3E-93 T 14-10-2018 Tlie_1015 2a30fd4cf069162bee73f1966555099c 755 Pfam PF01580 FtsK/SpoIIIE family 529 578 5.6E-14 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Tlie_1015 2a30fd4cf069162bee73f1966555099c 755 Pfam PF01580 FtsK/SpoIIIE family 390 524 2.4E-32 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Tlie_1531 9e33913a3542305a5490b669c2cc1969 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 86 104 1.7E-18 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_1531 9e33913a3542305a5490b669c2cc1969 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 1.7E-18 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_1531 9e33913a3542305a5490b669c2cc1969 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 25 43 1.7E-18 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_1531 9e33913a3542305a5490b669c2cc1969 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 69 84 1.7E-18 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_1531 9e33913a3542305a5490b669c2cc1969 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 1 364 41.498 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Tlie_1531 9e33913a3542305a5490b669c2cc1969 364 SUPERFAMILY SSF81271 279 364 8.07E-31 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Tlie_1531 9e33913a3542305a5490b669c2cc1969 364 PIRSF PIRSF006641 1 364 9.2E-121 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Tlie_1531 9e33913a3542305a5490b669c2cc1969 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 8.7E-112 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Tlie_1531 9e33913a3542305a5490b669c2cc1969 364 Gene3D G3DSA:3.40.50.300 2 278 1.9E-138 T 14-10-2018 Tlie_1531 9e33913a3542305a5490b669c2cc1969 364 Gene3D G3DSA:3.10.20.30 47 362 1.9E-138 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Tlie_1531 9e33913a3542305a5490b669c2cc1969 364 Pfam PF06071 Protein of unknown function (DUF933) 279 363 4.0E-36 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Tlie_1531 9e33913a3542305a5490b669c2cc1969 364 Pfam PF01926 50S ribosome-binding GTPase 4 114 2.9E-12 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_1531 9e33913a3542305a5490b669c2cc1969 364 SUPERFAMILY SSF52540 2 301 1.81E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1531 9e33913a3542305a5490b669c2cc1969 364 Gene3D G3DSA:1.10.150.300 112 198 1.9E-138 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Tlie_0655 ce17541640fe1e52cab98cd1f54388fc 94 Gene3D G3DSA:2.40.50.140 2 84 2.0E-35 T 14-10-2018 Tlie_0655 ce17541640fe1e52cab98cd1f54388fc 94 SUPERFAMILY SSF50249 5 83 6.85E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0655 ce17541640fe1e52cab98cd1f54388fc 94 Pfam PF00366 Ribosomal protein S17 11 78 2.8E-32 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0655 ce17541640fe1e52cab98cd1f54388fc 94 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 76 1.0E-21 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0655 ce17541640fe1e52cab98cd1f54388fc 94 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 6.7E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0655 ce17541640fe1e52cab98cd1f54388fc 94 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 6.7E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0655 ce17541640fe1e52cab98cd1f54388fc 94 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 6.7E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0655 ce17541640fe1e52cab98cd1f54388fc 94 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0655 ce17541640fe1e52cab98cd1f54388fc 94 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 77 4.2E-33 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0655 ce17541640fe1e52cab98cd1f54388fc 94 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 81 24.592 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0100 eab2863ef4a24c7188c2813917d8efee 255 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 58 254 2.3E-82 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tlie_0100 eab2863ef4a24c7188c2813917d8efee 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 126 140 1.1E-22 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tlie_0100 eab2863ef4a24c7188c2813917d8efee 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 176 188 1.1E-22 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tlie_0100 eab2863ef4a24c7188c2813917d8efee 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 114 126 1.1E-22 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tlie_0100 eab2863ef4a24c7188c2813917d8efee 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 54 63 1.1E-22 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tlie_0100 eab2863ef4a24c7188c2813917d8efee 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 244 254 1.1E-22 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tlie_0100 eab2863ef4a24c7188c2813917d8efee 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 154 166 1.1E-22 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tlie_0100 eab2863ef4a24c7188c2813917d8efee 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 95 114 1.3E-61 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tlie_0100 eab2863ef4a24c7188c2813917d8efee 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 75 95 1.3E-61 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tlie_0100 eab2863ef4a24c7188c2813917d8efee 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 204 225 1.3E-61 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tlie_0100 eab2863ef4a24c7188c2813917d8efee 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 56 75 1.3E-61 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tlie_0100 eab2863ef4a24c7188c2813917d8efee 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 183 203 1.3E-61 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tlie_0100 eab2863ef4a24c7188c2813917d8efee 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 228 253 1.3E-61 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tlie_0100 eab2863ef4a24c7188c2813917d8efee 255 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 231 243 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tlie_0100 eab2863ef4a24c7188c2813917d8efee 255 Pfam PF00813 FliP family 58 250 2.8E-76 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tlie_0899 74f7b7c1802be018448bc4eb67118c2f 377 SUPERFAMILY SSF53927 10 151 6.02E-43 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tlie_0899 74f7b7c1802be018448bc4eb67118c2f 377 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 95 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Tlie_0899 74f7b7c1802be018448bc4eb67118c2f 377 Gene3D G3DSA:3.40.140.10 2 142 1.4E-43 T 14-10-2018 Tlie_0899 74f7b7c1802be018448bc4eb67118c2f 377 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 153 364 1.3E-45 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 Tlie_0899 74f7b7c1802be018448bc4eb67118c2f 377 Pfam PF01872 RibD C-terminal domain 154 341 3.2E-41 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Tlie_0899 74f7b7c1802be018448bc4eb67118c2f 377 SUPERFAMILY SSF53597 151 364 6.02E-49 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Tlie_0899 74f7b7c1802be018448bc4eb67118c2f 377 Gene3D G3DSA:3.40.430.10 143 373 1.1E-60 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Tlie_0899 74f7b7c1802be018448bc4eb67118c2f 377 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 14 361 1.7E-104 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Tlie_0899 74f7b7c1802be018448bc4eb67118c2f 377 PIRSF PIRSF006769 5 370 1.0E-121 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Tlie_0899 74f7b7c1802be018448bc4eb67118c2f 377 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 106 4.4E-19 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Tlie_1164 fc9b5bae7907e7cd4318b1f3dc3d73d3 395 PIRSF PIRSF001434 9 395 1.7E-133 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Tlie_1164 fc9b5bae7907e7cd4318b1f3dc3d73d3 395 SUPERFAMILY SSF53383 27 393 8.2E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1164 fc9b5bae7907e7cd4318b1f3dc3d73d3 395 Gene3D G3DSA:3.40.640.10 13 257 8.0E-90 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1164 fc9b5bae7907e7cd4318b1f3dc3d73d3 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 24 391 2.0E-127 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Tlie_1164 fc9b5bae7907e7cd4318b1f3dc3d73d3 395 Gene3D G3DSA:3.90.1150.10 258 394 3.0E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1749 f7620f46dd01dbae187621d91a8aa54b 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 74 1.1E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1749 f7620f46dd01dbae187621d91a8aa54b 238 SUPERFAMILY SSF46785 8 79 2.73E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1749 f7620f46dd01dbae187621d91a8aa54b 238 Pfam PF07729 FCD domain 85 204 3.3E-17 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_1749 f7620f46dd01dbae187621d91a8aa54b 238 Gene3D G3DSA:1.20.120.530 78 213 9.4E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_1749 f7620f46dd01dbae187621d91a8aa54b 238 Gene3D G3DSA:1.10.10.10 9 75 7.1E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1749 f7620f46dd01dbae187621d91a8aa54b 238 SMART SM00345 17 75 8.4E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1749 f7620f46dd01dbae187621d91a8aa54b 238 SUPERFAMILY SSF48008 82 206 1.07E-16 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_1749 f7620f46dd01dbae187621d91a8aa54b 238 SMART SM00895 85 209 8.5E-6 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_1174 607cf09e1a435ad965e4ed915c952495 659 Gene3D G3DSA:1.10.486.10 384 540 6.5E-106 T 14-10-2018 Tlie_1174 607cf09e1a435ad965e4ed915c952495 659 Gene3D G3DSA:3.40.50.300 12 275 1.8E-88 T 14-10-2018 Tlie_1174 607cf09e1a435ad965e4ed915c952495 659 Pfam PF13361 UvrD-like helicase C-terminal domain 280 610 2.8E-61 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Tlie_1174 607cf09e1a435ad965e4ed915c952495 659 Gene3D G3DSA:3.40.50.300 283 627 6.5E-106 T 14-10-2018 Tlie_1174 607cf09e1a435ad965e4ed915c952495 659 Gene3D G3DSA:1.10.10.160 119 189 1.8E-88 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily Tlie_1174 607cf09e1a435ad965e4ed915c952495 659 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 274 4.0E-68 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Tlie_1174 607cf09e1a435ad965e4ed915c952495 659 SUPERFAMILY SSF52540 6 636 4.26E-159 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0967 33ca7465a12d6b0dbf3ed0b7f617d012 473 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 13 76 6.0E-13 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0967 33ca7465a12d6b0dbf3ed0b7f617d012 473 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 351 8.4E-67 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0967 33ca7465a12d6b0dbf3ed0b7f617d012 473 Gene3D G3DSA:3.40.50.12240 2 460 1.6E-185 T 14-10-2018 Tlie_0967 33ca7465a12d6b0dbf3ed0b7f617d012 473 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 4 460 59.996 T 14-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0967 33ca7465a12d6b0dbf3ed0b7f617d012 473 SUPERFAMILY SSF52540 80 356 3.24E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0967 33ca7465a12d6b0dbf3ed0b7f617d012 473 PIRSF PIRSF039114 1 466 3.3E-245 T 14-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0967 33ca7465a12d6b0dbf3ed0b7f617d012 473 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_1568 c716895a4e62bf598a317061ce53c8ed 292 Gene3D G3DSA:3.20.20.60 1 290 1.9E-100 T 14-10-2018 Tlie_1568 c716895a4e62bf598a317061ce53c8ed 292 SUPERFAMILY SSF51621 2 236 1.0E-61 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tlie_1568 c716895a4e62bf598a317061ce53c8ed 292 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 225 7.2E-61 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Tlie_1568 c716895a4e62bf598a317061ce53c8ed 292 PIRSF PIRSF015582 1 292 4.1E-84 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like Tlie_0224 5508f6aceb70dc6d0c86478314cc4c26 191 Pfam PF02915 Rubrerythrin 12 138 3.4E-32 T 14-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Tlie_0224 5508f6aceb70dc6d0c86478314cc4c26 191 SUPERFAMILY SSF47240 4 146 1.33E-41 T 14-10-2018 IPR009078 Ferritin-like superfamily Tlie_0224 5508f6aceb70dc6d0c86478314cc4c26 191 SUPERFAMILY SSF57802 148 190 6.71E-12 T 14-10-2018 Tlie_0224 5508f6aceb70dc6d0c86478314cc4c26 191 Gene3D G3DSA:2.20.28.10 147 191 1.0E-19 T 14-10-2018 Tlie_0224 5508f6aceb70dc6d0c86478314cc4c26 191 Gene3D G3DSA:1.20.1260.10 1 146 6.7E-62 T 14-10-2018 IPR012347 Ferritin-like Tlie_0529 bc230ae876ae1646ba91bba4a9f794b9 377 Pfam PF02481 DNA recombination-mediator protein A 75 278 3.1E-73 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Tlie_0529 bc230ae876ae1646ba91bba4a9f794b9 377 SUPERFAMILY SSF102405 84 275 3.36E-34 T 14-10-2018 Tlie_0529 bc230ae876ae1646ba91bba4a9f794b9 377 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 81 286 6.0E-72 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Tlie_0529 bc230ae876ae1646ba91bba4a9f794b9 377 Gene3D G3DSA:3.40.50.450 2 289 6.3E-88 T 14-10-2018 Tlie_1741 91d61b3c5f8cb83cd9f102b94001d5b3 401 Gene3D G3DSA:3.30.70.360 187 301 1.0E-136 T 14-10-2018 Tlie_1741 91d61b3c5f8cb83cd9f102b94001d5b3 401 SUPERFAMILY SSF55031 187 305 4.19E-28 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tlie_1741 91d61b3c5f8cb83cd9f102b94001d5b3 401 Pfam PF01546 Peptidase family M20/M25/M40 75 392 2.5E-37 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tlie_1741 91d61b3c5f8cb83cd9f102b94001d5b3 401 PIRSF PIRSF005962 2 399 1.6E-128 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Tlie_1741 91d61b3c5f8cb83cd9f102b94001d5b3 401 SUPERFAMILY SSF53187 5 395 1.08E-81 T 14-10-2018 Tlie_1741 91d61b3c5f8cb83cd9f102b94001d5b3 401 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 22 384 3.3E-112 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Tlie_1741 91d61b3c5f8cb83cd9f102b94001d5b3 401 Gene3D G3DSA:3.40.630.10 20 381 1.0E-136 T 14-10-2018 Tlie_1741 91d61b3c5f8cb83cd9f102b94001d5b3 401 Pfam PF07687 Peptidase dimerisation domain 192 283 2.8E-8 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Tlie_0334 f65e911f5b2ec382f5f65af677c38021 281 SMART SM00228 34 105 0.002 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tlie_0334 f65e911f5b2ec382f5f65af677c38021 281 SUPERFAMILY SSF50156 40 112 4.07E-8 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Tlie_0334 f65e911f5b2ec382f5f65af677c38021 281 Gene3D G3DSA:2.30.42.10 20 115 9.5E-7 T 14-10-2018 Tlie_1516 e53f64c5d4a824419d5c06f417d4232f 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 76 2.4E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1516 e53f64c5d4a824419d5c06f417d4232f 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 4.2E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1516 e53f64c5d4a824419d5c06f417d4232f 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 4.2E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1516 e53f64c5d4a824419d5c06f417d4232f 224 SUPERFAMILY SSF48008 82 215 4.18E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_1516 e53f64c5d4a824419d5c06f417d4232f 224 Gene3D G3DSA:1.10.10.10 5 77 1.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1516 e53f64c5d4a824419d5c06f417d4232f 224 SUPERFAMILY SSF46785 8 100 2.15E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1516 e53f64c5d4a824419d5c06f417d4232f 224 SMART SM00345 18 76 9.5E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1516 e53f64c5d4a824419d5c06f417d4232f 224 SMART SM00895 86 206 1.3E-17 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_1516 e53f64c5d4a824419d5c06f417d4232f 224 Pfam PF07729 FCD domain 86 205 1.5E-22 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_1516 e53f64c5d4a824419d5c06f417d4232f 224 Gene3D G3DSA:1.20.120.530 80 219 8.2E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0218 a2c68fa1671affa3a951f2a0447506c5 226 SUPERFAMILY SSF48008 81 207 2.01E-13 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0218 a2c68fa1671affa3a951f2a0447506c5 226 Gene3D G3DSA:1.20.120.530 78 214 3.5E-12 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0218 a2c68fa1671affa3a951f2a0447506c5 226 Gene3D G3DSA:1.10.10.10 9 76 1.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0218 a2c68fa1671affa3a951f2a0447506c5 226 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 46 65 4.1E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Tlie_0218 a2c68fa1671affa3a951f2a0447506c5 226 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 46 4.1E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Tlie_0218 a2c68fa1671affa3a951f2a0447506c5 226 SUPERFAMILY SSF46785 11 79 3.14E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_0218 a2c68fa1671affa3a951f2a0447506c5 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 2.6E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0218 a2c68fa1671affa3a951f2a0447506c5 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 2.6E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0218 a2c68fa1671affa3a951f2a0447506c5 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 1.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0218 a2c68fa1671affa3a951f2a0447506c5 226 SMART SM00345 16 75 1.7E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0218 a2c68fa1671affa3a951f2a0447506c5 226 Pfam PF07729 FCD domain 85 206 5.9E-10 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_1684 c6f0d1805f22e50bd2d6b48b05582555 407 Gene3D G3DSA:3.30.450.20 205 337 2.8E-25 T 14-10-2018 Tlie_1684 c6f0d1805f22e50bd2d6b48b05582555 407 SUPERFAMILY SSF55785 213 323 9.99E-25 T 14-10-2018 IPR035965 PAS domain superfamily Tlie_1684 c6f0d1805f22e50bd2d6b48b05582555 407 Pfam PF01966 HD domain 360 403 3.2E-7 T 14-10-2018 IPR006674 HD domain Tlie_1684 c6f0d1805f22e50bd2d6b48b05582555 407 SMART SM00086 281 323 2.0E-8 T 14-10-2018 IPR001610 PAC motif Tlie_1684 c6f0d1805f22e50bd2d6b48b05582555 407 SUPERFAMILY SSF109604 348 405 1.09E-12 T 14-10-2018 Tlie_1684 c6f0d1805f22e50bd2d6b48b05582555 407 Gene3D G3DSA:3.30.450.40 30 198 4.0E-6 T 14-10-2018 IPR029016 GAF-like domain superfamily Tlie_1684 c6f0d1805f22e50bd2d6b48b05582555 407 SMART SM00091 208 275 1.4E-7 T 14-10-2018 IPR000014 PAS domain Tlie_1684 c6f0d1805f22e50bd2d6b48b05582555 407 Gene3D G3DSA:1.10.3210.10 338 407 1.9E-17 T 14-10-2018 Tlie_1684 c6f0d1805f22e50bd2d6b48b05582555 407 Pfam PF08447 PAS fold 231 316 3.0E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Tlie_1684 c6f0d1805f22e50bd2d6b48b05582555 407 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 208 330 4.5E-19 T 14-10-2018 IPR000014 PAS domain Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 Pfam PF02254 TrkA-N domain 236 354 6.7E-20 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 Pfam PF02254 TrkA-N domain 3 125 4.2E-24 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 SUPERFAMILY SSF116726 379 454 1.31E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 SUPERFAMILY SSF116726 148 226 9.55E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 Gene3D G3DSA:3.30.70.1450 143 231 1.5E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 Gene3D G3DSA:3.40.50.720 2 139 2.3E-44 T 14-10-2018 Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 Pfam PF02080 TrkA-C domain 386 453 3.3E-15 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 Pfam PF02080 TrkA-C domain 156 225 3.8E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 SUPERFAMILY SSF51735 235 376 1.46E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 Gene3D G3DSA:3.40.50.720 234 367 2.8E-31 T 14-10-2018 Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 SUPERFAMILY SSF51735 2 138 1.44E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.1E-11 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 PRINTS PR00335 TrkA potassium uptake protein signature 64 74 1.1E-11 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.1E-11 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 PRINTS PR00335 TrkA potassium uptake protein signature 77 91 1.1E-11 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Tlie_1430 7530370b7ea29cf46a8291ad41f7e162 457 Gene3D G3DSA:3.30.70.1450 375 457 7.7E-19 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tlie_0815 56d3f9b95a2b43e07a3bb7c362d68ef9 382 Gene3D G3DSA:3.90.1150.10 5 357 1.3E-107 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_0815 56d3f9b95a2b43e07a3bb7c362d68ef9 382 Gene3D G3DSA:3.40.640.10 14 260 1.3E-107 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0815 56d3f9b95a2b43e07a3bb7c362d68ef9 382 PIRSF PIRSF000524 1 378 4.1E-102 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Tlie_0815 56d3f9b95a2b43e07a3bb7c362d68ef9 382 Pfam PF00266 Aminotransferase class-V 18 329 4.6E-39 T 14-10-2018 IPR000192 Aminotransferase class V domain Tlie_0815 56d3f9b95a2b43e07a3bb7c362d68ef9 382 SUPERFAMILY SSF53383 2 362 1.49E-89 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1371 f7abd7608d4e1aa59084b81007851377 231 Gene3D G3DSA:3.40.50.300 2 227 3.4E-65 T 14-10-2018 Tlie_1371 f7abd7608d4e1aa59084b81007851377 231 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_1371 f7abd7608d4e1aa59084b81007851377 231 SMART SM00382 28 223 1.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1371 f7abd7608d4e1aa59084b81007851377 231 Pfam PF00005 ABC transporter 19 166 2.8E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1371 f7abd7608d4e1aa59084b81007851377 231 SUPERFAMILY SSF52540 3 221 2.6E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1620 3c29f06e9598b491831afc0c6562f20e 185 SMART SM00387 3 107 8.0E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_1620 3c29f06e9598b491831afc0c6562f20e 185 Gene3D G3DSA:3.30.565.10 2 104 8.0E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_1620 3c29f06e9598b491831afc0c6562f20e 185 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 4 103 5.2E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_1620 3c29f06e9598b491831afc0c6562f20e 185 SUPERFAMILY SSF55874 4 104 7.99E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_1620 3c29f06e9598b491831afc0c6562f20e 185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 37 51 1.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1620 3c29f06e9598b491831afc0c6562f20e 185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 67 85 1.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1620 3c29f06e9598b491831afc0c6562f20e 185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 55 65 1.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1620 3c29f06e9598b491831afc0c6562f20e 185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 91 104 1.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_0778 7328096daf6b0f9da45f8815162fb876 440 SMART SM00116 278 326 0.011 T 14-10-2018 IPR000644 CBS domain Tlie_0778 7328096daf6b0f9da45f8815162fb876 440 SMART SM00116 215 264 9.1E-6 T 14-10-2018 IPR000644 CBS domain Tlie_0778 7328096daf6b0f9da45f8815162fb876 440 SMART SM01091 341 419 4.0E-24 T 14-10-2018 IPR005170 Transporter-associated domain Tlie_0778 7328096daf6b0f9da45f8815162fb876 440 Pfam PF00571 CBS domain 276 326 5.9E-9 T 14-10-2018 IPR000644 CBS domain Tlie_0778 7328096daf6b0f9da45f8815162fb876 440 Pfam PF00571 CBS domain 211 264 1.4E-7 T 14-10-2018 IPR000644 CBS domain Tlie_0778 7328096daf6b0f9da45f8815162fb876 440 Pfam PF01595 Domain of unknown function DUF21 13 191 1.7E-42 T 14-10-2018 IPR002550 CNNM, transmembrane domain Tlie_0778 7328096daf6b0f9da45f8815162fb876 440 SUPERFAMILY SSF56176 339 428 1.61E-23 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Tlie_0778 7328096daf6b0f9da45f8815162fb876 440 Gene3D G3DSA:3.30.465.10 335 416 5.8E-21 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Tlie_0778 7328096daf6b0f9da45f8815162fb876 440 SUPERFAMILY SSF54631 201 345 1.11E-38 T 14-10-2018 Tlie_0778 7328096daf6b0f9da45f8815162fb876 440 Gene3D G3DSA:3.10.580.10 185 334 2.9E-57 T 14-10-2018 Tlie_0778 7328096daf6b0f9da45f8815162fb876 440 Pfam PF03471 Transporter associated domain 342 416 3.0E-19 T 14-10-2018 IPR005170 Transporter-associated domain Tlie_0174 0fc86c3bce9d14c793bda297480f78c2 412 SUPERFAMILY SSF109604 202 399 6.44E-17 T 14-10-2018 Tlie_0174 0fc86c3bce9d14c793bda297480f78c2 412 Gene3D G3DSA:1.10.3210.10 11 205 8.5E-27 T 14-10-2018 Tlie_0174 0fc86c3bce9d14c793bda297480f78c2 412 Gene3D G3DSA:1.10.3210.10 206 411 1.2E-29 T 14-10-2018 Tlie_0174 0fc86c3bce9d14c793bda297480f78c2 412 Pfam PF13023 HD domain 211 321 1.8E-9 T 14-10-2018 IPR006674 HD domain Tlie_0174 0fc86c3bce9d14c793bda297480f78c2 412 SUPERFAMILY SSF109604 13 189 2.2E-7 T 14-10-2018 Tlie_1372 d427a9e0576377ff47395f4f621affcc 314 SUPERFAMILY SSF52922 178 308 1.44E-33 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_1372 d427a9e0576377ff47395f4f621affcc 314 SUPERFAMILY SSF52518 4 169 3.78E-53 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1372 d427a9e0576377ff47395f4f621affcc 314 Pfam PF02780 Transketolase, C-terminal domain 181 301 3.0E-32 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Tlie_1372 d427a9e0576377ff47395f4f621affcc 314 SMART SM00861 4 170 9.6E-51 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tlie_1372 d427a9e0576377ff47395f4f621affcc 314 Gene3D G3DSA:3.40.50.920 181 312 7.6E-39 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_1372 d427a9e0576377ff47395f4f621affcc 314 Gene3D G3DSA:3.40.50.970 1 176 7.2E-60 T 14-10-2018 Tlie_1372 d427a9e0576377ff47395f4f621affcc 314 Pfam PF02779 Transketolase, pyrimidine binding domain 5 165 3.4E-33 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tlie_0011 1b5c3c38b387b0c30fc38a3a56850d6e 392 Gene3D G3DSA:3.40.630.10 24 363 6.2E-122 T 14-10-2018 Tlie_0011 1b5c3c38b387b0c30fc38a3a56850d6e 392 SUPERFAMILY SSF53187 9 377 4.07E-53 T 14-10-2018 Tlie_0011 1b5c3c38b387b0c30fc38a3a56850d6e 392 Pfam PF01546 Peptidase family M20/M25/M40 92 336 3.6E-7 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tlie_0011 1b5c3c38b387b0c30fc38a3a56850d6e 392 PIRSF PIRSF037226 2 392 1.8E-132 T 14-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted Tlie_0011 1b5c3c38b387b0c30fc38a3a56850d6e 392 Gene3D G3DSA:3.30.70.360 169 286 6.2E-122 T 14-10-2018 Tlie_0011 1b5c3c38b387b0c30fc38a3a56850d6e 392 SUPERFAMILY SSF55031 171 275 1.24E-21 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tlie_0011 1b5c3c38b387b0c30fc38a3a56850d6e 392 Pfam PF07687 Peptidase dimerisation domain 174 257 2.3E-8 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Tlie_0011 1b5c3c38b387b0c30fc38a3a56850d6e 392 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 26 354 3.4E-60 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Tlie_0048 37b4b9c13538cdb94bc7be05ea1b351e 127 Gene3D G3DSA:2.20.28.100 1 38 4.9E-19 T 14-10-2018 IPR038094 Desulforodoxin domain superfamily Tlie_0048 37b4b9c13538cdb94bc7be05ea1b351e 127 Pfam PF01880 Desulfoferrodoxin 42 126 1.1E-20 T 14-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 Tlie_0048 37b4b9c13538cdb94bc7be05ea1b351e 127 Pfam PF06397 Desulfoferrodoxin, N-terminal domain 3 35 2.3E-20 T 14-10-2018 IPR004462 Desulforodoxin domain GO:0005506 Tlie_0048 37b4b9c13538cdb94bc7be05ea1b351e 127 SUPERFAMILY SSF57802 4 36 1.65E-12 T 14-10-2018 Tlie_0048 37b4b9c13538cdb94bc7be05ea1b351e 127 SUPERFAMILY SSF49367 34 126 1.03E-30 T 14-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 Tlie_0048 37b4b9c13538cdb94bc7be05ea1b351e 127 TIGRFAM TIGR00332 neela_ferrous: desulfoferrodoxin ferrous iron-binding domain 40 126 7.5E-25 T 14-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 Tlie_0048 37b4b9c13538cdb94bc7be05ea1b351e 127 Gene3D G3DSA:2.60.40.730 40 127 1.7E-30 T 14-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 Tlie_0048 37b4b9c13538cdb94bc7be05ea1b351e 127 TIGRFAM TIGR00320 dfx_rbo: desulfoferrodoxin 1 125 1.7E-54 T 14-10-2018 IPR004793 Desulfoferrodoxin GO:0005506|GO:0019430 Tlie_0048 37b4b9c13538cdb94bc7be05ea1b351e 127 TIGRFAM TIGR00319 desulf_FeS4: desulfoferrodoxin FeS4 iron-binding domain 1 34 1.2E-20 T 14-10-2018 IPR004462 Desulforodoxin domain GO:0005506 Tlie_0298 42ca012b193cc491a7cae8d48987262d 416 Gene3D G3DSA:3.30.300.30 315 415 1.4E-26 T 14-10-2018 Tlie_0298 42ca012b193cc491a7cae8d48987262d 416 Gene3D G3DSA:3.40.50.12780 3 314 2.6E-120 T 14-10-2018 Tlie_0298 42ca012b193cc491a7cae8d48987262d 416 PIRSF PIRSF006444 3 415 4.8E-176 T 14-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 Tlie_0298 42ca012b193cc491a7cae8d48987262d 416 SUPERFAMILY SSF56801 11 368 2.09E-58 T 14-10-2018 Tlie_0298 42ca012b193cc491a7cae8d48987262d 416 Pfam PF00501 AMP-binding enzyme 69 275 4.3E-18 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Tlie_0298 42ca012b193cc491a7cae8d48987262d 416 Pfam PF14535 AMP-binding enzyme C-terminal domain 323 413 5.8E-20 T 14-10-2018 IPR028154 AMP-dependent ligase, C-terminal Tlie_1037 b3bbe8baf7d1acfafe24632fa025d52e 564 SUPERFAMILY SSF81585 494 546 6.21E-7 T 14-10-2018 Tlie_1037 b3bbe8baf7d1acfafe24632fa025d52e 564 SMART SM00729 179 426 5.7E-10 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tlie_1037 b3bbe8baf7d1acfafe24632fa025d52e 564 Gene3D G3DSA:3.80.30.20 179 435 4.1E-15 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tlie_1037 b3bbe8baf7d1acfafe24632fa025d52e 564 Gene3D G3DSA:1.10.150.320 495 546 8.1E-6 T 14-10-2018 Tlie_1037 b3bbe8baf7d1acfafe24632fa025d52e 564 SUPERFAMILY SSF102114 172 388 3.73E-13 T 14-10-2018 Tlie_1500 896233a2f95469ab4fe4bc73bd63e1d7 238 SMART SM00895 98 225 2.5E-21 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_1500 896233a2f95469ab4fe4bc73bd63e1d7 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.5E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1500 896233a2f95469ab4fe4bc73bd63e1d7 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.5E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1500 896233a2f95469ab4fe4bc73bd63e1d7 238 Gene3D G3DSA:1.20.120.530 96 237 8.2E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_1500 896233a2f95469ab4fe4bc73bd63e1d7 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 2.6E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1500 896233a2f95469ab4fe4bc73bd63e1d7 238 Gene3D G3DSA:1.10.10.10 4 81 1.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1500 896233a2f95469ab4fe4bc73bd63e1d7 238 Pfam PF07729 FCD domain 98 224 7.7E-24 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_1500 896233a2f95469ab4fe4bc73bd63e1d7 238 SUPERFAMILY SSF46785 2 77 6.89E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1500 896233a2f95469ab4fe4bc73bd63e1d7 238 SUPERFAMILY SSF48008 97 231 1.18E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_1500 896233a2f95469ab4fe4bc73bd63e1d7 238 SMART SM00345 14 73 3.2E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0629 8dfb3b903ed4cd3ce032b9ff0ab34f27 207 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 3 126 1.5E-26 T 14-10-2018 IPR018768 Domain of unknown function DUF2344 Tlie_0629 8dfb3b903ed4cd3ce032b9ff0ab34f27 207 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 3 127 1.4E-24 T 14-10-2018 IPR018768 Domain of unknown function DUF2344 Tlie_0588 b07f66e68070b780d1e92a70b48f1859 162 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 126 142 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Tlie_0588 b07f66e68070b780d1e92a70b48f1859 162 Pfam PF03449 Transcription elongation factor, N-terminal 10 80 4.1E-28 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Tlie_0588 b07f66e68070b780d1e92a70b48f1859 162 SUPERFAMILY SSF54534 86 160 3.01E-21 T 14-10-2018 Tlie_0588 b07f66e68070b780d1e92a70b48f1859 162 PIRSF PIRSF006092 5 162 4.5E-52 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Tlie_0588 b07f66e68070b780d1e92a70b48f1859 162 Hamap MF_00105 Transcription elongation factor GreA [greA]. 8 161 29.398 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Tlie_0588 b07f66e68070b780d1e92a70b48f1859 162 Gene3D G3DSA:1.10.287.180 8 81 1.3E-27 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Tlie_0588 b07f66e68070b780d1e92a70b48f1859 162 Gene3D G3DSA:3.10.50.30 82 162 1.0E-25 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Tlie_0588 b07f66e68070b780d1e92a70b48f1859 162 SUPERFAMILY SSF46557 9 83 2.49E-24 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Tlie_0588 b07f66e68070b780d1e92a70b48f1859 162 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 88 161 3.2E-27 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Tlie_0588 b07f66e68070b780d1e92a70b48f1859 162 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 12 161 9.6E-54 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 Tlie_0588 b07f66e68070b780d1e92a70b48f1859 162 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 23 54 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Tlie_0548 323b2806c07c3c9ea6d9f66a5af2da6f 280 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 9 271 1.1E-64 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Tlie_0548 323b2806c07c3c9ea6d9f66a5af2da6f 280 Gene3D G3DSA:3.30.230.20 6 123 4.8E-22 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Tlie_0548 323b2806c07c3c9ea6d9f66a5af2da6f 280 SUPERFAMILY SSF54211 135 271 6.68E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_0548 323b2806c07c3c9ea6d9f66a5af2da6f 280 Gene3D G3DSA:3.30.1700.10 127 277 2.1E-41 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Tlie_0548 323b2806c07c3c9ea6d9f66a5af2da6f 280 SUPERFAMILY SSF54211 9 112 7.59E-18 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_1716 1ca7db896275adc1311368f86958795b 324 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 324 1.1E-42 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Tlie_1716 1ca7db896275adc1311368f86958795b 324 SUPERFAMILY SSF53850 26 322 2.17E-40 T 14-10-2018 Tlie_1716 1ca7db896275adc1311368f86958795b 324 Gene3D G3DSA:3.40.190.10 33 322 4.9E-65 T 14-10-2018 Tlie_1716 1ca7db896275adc1311368f86958795b 324 Pfam PF16868 NMT1-like family 33 323 1.9E-41 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Tlie_1716 1ca7db896275adc1311368f86958795b 324 Gene3D G3DSA:3.40.190.10 112 262 4.9E-65 T 14-10-2018 Tlie_0468 4c0cd2def41c9201ba84b202dfd991e9 452 SUPERFAMILY SSF46689 14 118 1.49E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0468 4c0cd2def41c9201ba84b202dfd991e9 452 SUPERFAMILY SSF53098 143 303 2.88E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_0468 4c0cd2def41c9201ba84b202dfd991e9 452 Pfam PF13518 Helix-turn-helix domain 15 66 6.4E-8 T 14-10-2018 Tlie_0468 4c0cd2def41c9201ba84b202dfd991e9 452 Gene3D G3DSA:3.30.420.10 129 314 6.1E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tlie_0468 4c0cd2def41c9201ba84b202dfd991e9 452 Pfam PF00665 Integrase core domain 143 271 2.6E-8 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tlie_1394 ef492ab1c4c469e1afa381d1daf8e639 169 SUPERFAMILY SSF46785 3 61 1.63E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1394 ef492ab1c4c469e1afa381d1daf8e639 169 SUPERFAMILY SSF75500 67 168 3.92E-32 T 14-10-2018 IPR035922 3H domain superfamily Tlie_1394 ef492ab1c4c469e1afa381d1daf8e639 169 PIRSF PIRSF037847 1 169 2.0E-61 T 14-10-2018 IPR026043 Transcription repressor NadR Tlie_1394 ef492ab1c4c469e1afa381d1daf8e639 169 Pfam PF02829 3H domain 71 167 4.7E-35 T 14-10-2018 IPR004173 3H domain GO:0036094 Tlie_1394 ef492ab1c4c469e1afa381d1daf8e639 169 Gene3D G3DSA:1.10.10.10 1 61 3.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1394 ef492ab1c4c469e1afa381d1daf8e639 169 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 74 168 7.0E-26 T 14-10-2018 IPR004173 3H domain GO:0036094 Tlie_1394 ef492ab1c4c469e1afa381d1daf8e639 169 Pfam PF08279 HTH domain 6 59 1.5E-13 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Tlie_1394 ef492ab1c4c469e1afa381d1daf8e639 169 Gene3D G3DSA:3.30.1340.20 65 169 1.1E-37 T 14-10-2018 IPR035922 3H domain superfamily Tlie_0729 08920e687f26fe62af88f3fcff5f6831 65 Gene3D G3DSA:2.40.50.530 1 65 3.5E-25 T 14-10-2018 Tlie_0729 08920e687f26fe62af88f3fcff5f6831 65 SUPERFAMILY SSF143034 2 64 1.44E-21 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0729 08920e687f26fe62af88f3fcff5f6831 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.9E-24 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Tlie_0729 08920e687f26fe62af88f3fcff5f6831 65 Pfam PF01632 Ribosomal protein L35 2 62 5.2E-23 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0729 08920e687f26fe62af88f3fcff5f6831 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.7E-14 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Tlie_0729 08920e687f26fe62af88f3fcff5f6831 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.7E-14 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Tlie_0729 08920e687f26fe62af88f3fcff5f6831 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.7E-14 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Tlie_0729 08920e687f26fe62af88f3fcff5f6831 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.249 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Tlie_0729 08920e687f26fe62af88f3fcff5f6831 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1823 25bb10f933f3f371362020c0daf65859 333 Gene3D G3DSA:3.30.360.10 129 331 1.1E-110 T 14-10-2018 Tlie_1823 25bb10f933f3f371362020c0daf65859 333 SUPERFAMILY SSF51735 2 156 5.53E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1823 25bb10f933f3f371362020c0daf65859 333 SUPERFAMILY SSF55347 126 274 1.18E-37 T 14-10-2018 Tlie_1823 25bb10f933f3f371362020c0daf65859 333 Gene3D G3DSA:3.40.50.720 3 312 1.1E-110 T 14-10-2018 Tlie_1823 25bb10f933f3f371362020c0daf65859 333 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 247 3.0E-12 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Tlie_1823 25bb10f933f3f371362020c0daf65859 333 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 6.5E-28 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Tlie_1081 ba0e650cb5adba3a5c6ed2f3edd44c93 415 Pfam PF04468 PSP1 C-terminal conserved region 83 164 2.9E-23 T 14-10-2018 IPR007557 PSP1, C-terminal Tlie_0705 3907ae313c0ad1bf1434f35cf59717e0 223 PIRSF PIRSF016933 10 222 5.3E-51 T 14-10-2018 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 Tlie_0705 3907ae313c0ad1bf1434f35cf59717e0 223 Pfam PF13367 Protease prsW family 37 206 6.2E-25 T 14-10-2018 IPR026898 Protease PrsW GO:0008233 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 509 5.2E-168 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 Pfam PF08264 Anticodon-binding domain of tRNA 389 517 2.9E-10 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 SUPERFAMILY SSF50249 540 642 3.92E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 Hamap MF_01228 Methionine--tRNA ligase [metG]. 2 507 49.251 T 14-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 SUPERFAMILY SSF52374 3 347 4.29E-119 T 14-10-2018 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 Pfam PF09334 tRNA synthetases class I (M) 6 154 5.7E-52 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 Pfam PF09334 tRNA synthetases class I (M) 157 361 1.9E-67 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 Gene3D G3DSA:2.40.50.140 531 643 4.8E-39 T 14-10-2018 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 Pfam PF01588 Putative tRNA binding domain 547 640 7.3E-31 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 Gene3D G3DSA:3.40.50.620 6 333 3.6E-155 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 515 642 4.3E-45 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 4.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 PRINTS PR01041 Methionyl-tRNA synthetase signature 348 359 4.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 PRINTS PR01041 Methionyl-tRNA synthetase signature 224 235 4.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 271 4.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 4.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 4.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 Gene3D G3DSA:2.170.220.10 117 226 3.6E-155 T 14-10-2018 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 Gene3D G3DSA:1.10.730.10 337 514 2.1E-52 T 14-10-2018 Tlie_0634 f8e16130083b9165edf4f1287632dec5 643 SUPERFAMILY SSF47323 350 555 7.1E-47 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0312 260844d95910b0c4b7186baf8726ecb7 344 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 39 315 8.3E-86 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Tlie_0312 260844d95910b0c4b7186baf8726ecb7 344 Gene3D G3DSA:3.40.190.170 26 343 5.8E-102 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Tlie_0312 260844d95910b0c4b7186baf8726ecb7 344 PIRSF PIRSF006470 1 334 2.4E-87 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Tlie_0312 260844d95910b0c4b7186baf8726ecb7 344 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 39 290 1.3E-71 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Tlie_0463 d26c655081826fae211740cd2c7dbe1e 933 Pfam PF00271 Helicase conserved C-terminal domain 516 623 9.6E-14 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_0463 d26c655081826fae211740cd2c7dbe1e 933 SMART SM00490 544 623 3.4E-15 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_0463 d26c655081826fae211740cd2c7dbe1e 933 Pfam PF00176 SNF2 family N-terminal domain 120 293 3.8E-18 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Tlie_0463 d26c655081826fae211740cd2c7dbe1e 933 SUPERFAMILY SSF52540 220 663 6.85E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0463 d26c655081826fae211740cd2c7dbe1e 933 Gene3D G3DSA:3.40.50.300 443 653 1.6E-37 T 14-10-2018 Tlie_0463 d26c655081826fae211740cd2c7dbe1e 933 Gene3D G3DSA:3.40.50.10810 99 371 6.8E-69 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Tlie_0463 d26c655081826fae211740cd2c7dbe1e 933 SMART SM00487 99 300 4.6E-21 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tlie_0463 d26c655081826fae211740cd2c7dbe1e 933 SUPERFAMILY SSF52540 70 295 3.99E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1866 76e9e23eb6c7ac18bdd0d10b76568a35 172 SUPERFAMILY SSF55469 2 168 1.27E-41 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tlie_1866 76e9e23eb6c7ac18bdd0d10b76568a35 172 Gene3D G3DSA:3.40.109.10 1 172 6.1E-46 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tlie_1866 76e9e23eb6c7ac18bdd0d10b76568a35 172 Pfam PF00881 Nitroreductase family 65 149 8.2E-12 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tlie_1866 76e9e23eb6c7ac18bdd0d10b76568a35 172 Pfam PF00881 Nitroreductase family 5 59 3.5E-14 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tlie_1509 b8b602c8e3e35bf59a73ea3cf95f9bcf 172 SUPERFAMILY SSF52833 7 164 6.68E-42 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tlie_1509 b8b602c8e3e35bf59a73ea3cf95f9bcf 172 Gene3D G3DSA:3.40.30.10 2 170 1.1E-48 T 14-10-2018 Tlie_1509 b8b602c8e3e35bf59a73ea3cf95f9bcf 172 Pfam PF08534 Redoxin 22 163 1.0E-22 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Tlie_1509 b8b602c8e3e35bf59a73ea3cf95f9bcf 172 Hamap MF_00269 Thiol peroxidase [tpx]. 6 167 33.805 T 14-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 Tlie_1509 b8b602c8e3e35bf59a73ea3cf95f9bcf 172 ProSitePatterns PS01265 Tpx family signature. 87 98 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 Tlie_0387 1288c7984f37e18de49bf9588019baf3 228 SUPERFAMILY SSF100950 5 175 1.85E-16 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Tlie_0387 1288c7984f37e18de49bf9588019baf3 228 Gene3D G3DSA:3.30.70.260 123 202 3.7E-46 T 14-10-2018 Tlie_0387 1288c7984f37e18de49bf9588019baf3 228 Gene3D G3DSA:3.40.50.1360 6 216 3.7E-46 T 14-10-2018 Tlie_0387 1288c7984f37e18de49bf9588019baf3 228 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 216 1.8E-33 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Tlie_0387 1288c7984f37e18de49bf9588019baf3 228 SUPERFAMILY SSF75445 127 203 8.89E-15 T 14-10-2018 Tlie_1737 28c68085b797084ba6d21740552a5fc5 305 Pfam PF03466 LysR substrate binding domain 90 295 8.3E-34 T 14-10-2018 IPR005119 LysR, substrate-binding Tlie_1737 28c68085b797084ba6d21740552a5fc5 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tlie_1737 28c68085b797084ba6d21740552a5fc5 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tlie_1737 28c68085b797084ba6d21740552a5fc5 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tlie_1737 28c68085b797084ba6d21740552a5fc5 305 Gene3D G3DSA:3.40.190.10 168 272 2.1E-24 T 14-10-2018 Tlie_1737 28c68085b797084ba6d21740552a5fc5 305 Gene3D G3DSA:3.40.190.10 93 275 2.1E-24 T 14-10-2018 Tlie_1737 28c68085b797084ba6d21740552a5fc5 305 SUPERFAMILY SSF46785 3 112 1.66E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1737 28c68085b797084ba6d21740552a5fc5 305 SUPERFAMILY SSF53850 91 297 1.47E-31 T 14-10-2018 Tlie_1737 28c68085b797084ba6d21740552a5fc5 305 Gene3D G3DSA:1.10.10.10 2 92 7.4E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1737 28c68085b797084ba6d21740552a5fc5 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 6.2E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 PRINTS PR00992 Alanine racemase signature 203 230 3.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 PRINTS PR00992 Alanine racemase signature 259 274 3.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 PRINTS PR00992 Alanine racemase signature 353 366 3.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 PRINTS PR00992 Alanine racemase signature 65 83 3.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 PRINTS PR00992 Alanine racemase signature 276 291 3.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 PRINTS PR00992 Alanine racemase signature 297 314 3.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 PRINTS PR00992 Alanine racemase signature 160 171 3.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 PRINTS PR00992 Alanine racemase signature 126 138 3.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 PRINTS PR00992 Alanine racemase signature 29 45 3.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 Pfam PF00842 Alanine racemase, C-terminal domain 244 370 7.4E-46 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 Gene3D G3DSA:3.20.20.10 12 226 5.3E-134 T 14-10-2018 IPR029066 PLP-binding barrel Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 Pfam PF01168 Alanine racemase, N-terminal domain 10 230 7.3E-69 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 SUPERFAMILY SSF51419 10 233 2.4E-65 T 14-10-2018 IPR029066 PLP-binding barrel Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 SMART SM01005 243 371 1.8E-69 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 Hamap MF_01201 Alanine racemase. 3 371 33.981 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 Gene3D G3DSA:2.40.37.10 8 370 5.3E-134 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 TIGRFAM TIGR00492 alr: alanine racemase 5 371 7.0E-116 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_1283 4c43a7ab00bfcc9fa07340814f316dc4 371 SUPERFAMILY SSF50621 237 371 6.98E-49 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Tlie_1302 4e5b5eabd3e3eeeebf333bdeca6dc975 693 SUPERFAMILY SSF50249 7 178 2.57E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_1302 4e5b5eabd3e3eeeebf333bdeca6dc975 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 30 659 9.3E-230 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Tlie_1302 4e5b5eabd3e3eeeebf333bdeca6dc975 693 Pfam PF00270 DEAD/DEAH box helicase 270 427 4.3E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tlie_1302 4e5b5eabd3e3eeeebf333bdeca6dc975 693 SMART SM00487 265 455 6.6E-38 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tlie_1302 4e5b5eabd3e3eeeebf333bdeca6dc975 693 SUPERFAMILY SSF52540 388 598 2.17E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1302 4e5b5eabd3e3eeeebf333bdeca6dc975 693 Gene3D G3DSA:3.40.50.300 453 624 5.3E-56 T 14-10-2018 Tlie_1302 4e5b5eabd3e3eeeebf333bdeca6dc975 693 Gene3D G3DSA:3.40.50.300 249 452 3.3E-84 T 14-10-2018 Tlie_1302 4e5b5eabd3e3eeeebf333bdeca6dc975 693 Gene3D G3DSA:2.40.50.140 49 146 3.1E-20 T 14-10-2018 Tlie_1302 4e5b5eabd3e3eeeebf333bdeca6dc975 693 SUPERFAMILY SSF52540 184 449 3.12E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1302 4e5b5eabd3e3eeeebf333bdeca6dc975 693 Pfam PF00271 Helicase conserved C-terminal domain 467 584 5.2E-20 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_1302 4e5b5eabd3e3eeeebf333bdeca6dc975 693 Pfam PF17191 RecG wedge domain 12 177 9.7E-34 T 14-10-2018 IPR033454 RecG, wedge domain Tlie_1302 4e5b5eabd3e3eeeebf333bdeca6dc975 693 SMART SM00490 500 584 6.1E-22 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_0910 3c94ab9f765a5354bfc1a77a3f0005b6 350 Gene3D G3DSA:1.20.1690.10 207 306 9.4E-56 T 14-10-2018 IPR035067 V-type ATPase subunit c Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0910 3c94ab9f765a5354bfc1a77a3f0005b6 350 Pfam PF01992 ATP synthase (C/AC39) subunit 14 342 1.9E-44 T 14-10-2018 IPR002843 ATPase, V0 complex, c/d subunit Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0910 3c94ab9f765a5354bfc1a77a3f0005b6 350 Gene3D G3DSA:1.20.1690.10 90 206 9.4E-56 T 14-10-2018 IPR035067 V-type ATPase subunit c Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0910 3c94ab9f765a5354bfc1a77a3f0005b6 350 Gene3D G3DSA:1.10.132.50 10 340 9.4E-56 T 14-10-2018 Tlie_0910 3c94ab9f765a5354bfc1a77a3f0005b6 350 SUPERFAMILY SSF103486 10 347 8.11E-30 T 14-10-2018 IPR036079 V-type ATP synthase subunit C-like Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0939 72587174d870540f812c77ba5f1e1173 452 Gene3D G3DSA:3.30.420.10 129 314 1.7E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tlie_0939 72587174d870540f812c77ba5f1e1173 452 Pfam PF13518 Helix-turn-helix domain 18 66 4.4E-7 T 14-10-2018 Tlie_0939 72587174d870540f812c77ba5f1e1173 452 SUPERFAMILY SSF46689 14 118 2.15E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0939 72587174d870540f812c77ba5f1e1173 452 SUPERFAMILY SSF53098 143 303 7.28E-16 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_0939 72587174d870540f812c77ba5f1e1173 452 Pfam PF00665 Integrase core domain 143 271 2.7E-9 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tlie_1134 febc311d759933969712b5abeaa27472 60 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 6 58 1.8E-16 T 14-10-2018 Tlie_1134 febc311d759933969712b5abeaa27472 60 PRINTS PR00352 3Fe-4S ferredoxin signature 5 16 3.5E-9 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Tlie_1134 febc311d759933969712b5abeaa27472 60 PRINTS PR00352 3Fe-4S ferredoxin signature 16 26 3.5E-9 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Tlie_1134 febc311d759933969712b5abeaa27472 60 PRINTS PR00352 3Fe-4S ferredoxin signature 44 56 3.5E-9 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Tlie_1134 febc311d759933969712b5abeaa27472 60 Gene3D G3DSA:3.30.70.20 3 59 2.2E-20 T 14-10-2018 Tlie_1134 febc311d759933969712b5abeaa27472 60 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_1134 febc311d759933969712b5abeaa27472 60 SUPERFAMILY SSF54862 2 58 1.4E-12 T 14-10-2018 Tlie_0402 f6a9ef85e20798cd88870bef88dc7d41 136 Pfam PF02310 B12 binding domain 6 118 1.0E-25 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tlie_0402 f6a9ef85e20798cd88870bef88dc7d41 136 Gene3D G3DSA:3.40.50.280 1 136 2.8E-61 T 14-10-2018 Tlie_0402 f6a9ef85e20798cd88870bef88dc7d41 136 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 4 134 1.9E-51 T 14-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Tlie_0402 f6a9ef85e20798cd88870bef88dc7d41 136 SUPERFAMILY SSF52242 3 132 3.66E-52 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 Gene3D G3DSA:3.30.230.10 616 799 1.1E-68 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 Hamap MF_01973 Lon protease [lon]. 27 795 66.575 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 373 392 1.2E-48 T 14-10-2018 Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 745 1.2E-48 T 14-10-2018 Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 749 767 1.2E-48 T 14-10-2018 Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 618 634 1.2E-48 T 14-10-2018 Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 696 715 1.2E-48 T 14-10-2018 Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 Gene3D G3DSA:1.10.8.60 509 607 1.0E-27 T 14-10-2018 Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 699 707 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 SMART SM00382 365 510 4.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 TIGRFAM TIGR00763 lon: endopeptidase La 28 791 4.6E-286 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 SUPERFAMILY SSF52540 329 606 2.84E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 PIRSF PIRSF001174 12 797 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 SUPERFAMILY SSF54211 618 792 1.33E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 Gene3D G3DSA:1.20.58.1480 138 263 2.9E-40 T 14-10-2018 Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 Gene3D G3DSA:3.40.50.300 330 508 8.0E-64 T 14-10-2018 Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 369 506 2.7E-21 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 26 218 2.7E-41 T 14-10-2018 IPR003111 Lon, substrate-binding domain Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 SUPERFAMILY SSF88697 26 218 2.73E-44 T 14-10-2018 IPR015947 PUA-like superfamily Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 SMART SM00464 26 220 9.1E-67 T 14-10-2018 IPR003111 Lon, substrate-binding domain Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 593 792 2.6E-78 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Tlie_1066 4b697c256f30808b820d7e61e11b7ee1 799 Gene3D G3DSA:2.30.130.40 12 134 6.7E-33 T 14-10-2018 Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 SUPERFAMILY SSF48029 112 323 2.62E-72 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 Gene3D G3DSA:1.10.220.30 193 331 7.6E-54 T 14-10-2018 Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 PIRSF PIRSF003161 1 331 1.5E-119 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 Gene3D G3DSA:1.10.220.30 1 82 6.8E-16 T 14-10-2018 Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 5.3E-70 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 5.3E-70 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 5.3E-70 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 5.3E-70 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 5.3E-70 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 112 135 5.3E-70 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 5.3E-70 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 Pfam PF14841 FliG middle domain 113 185 5.4E-31 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 Gene3D G3DSA:1.10.220.30 101 192 3.3E-33 T 14-10-2018 Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 Pfam PF14842 FliG N-terminal domain 2 105 6.5E-33 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 Pfam PF01706 FliG C-terminal domain 217 322 4.1E-46 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 SUPERFAMILY SSF48029 4 109 3.79E-19 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Tlie_0075 10fc78a4e7ad29d6f2f5ae0c9759990c 331 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 330 1.2E-129 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tlie_1075 f95d47469da12288f0e3f2bb057408fb 176 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 5 176 1.4E-64 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Tlie_1075 f95d47469da12288f0e3f2bb057408fb 176 SUPERFAMILY SSF52540 4 176 1.44E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1075 f95d47469da12288f0e3f2bb057408fb 176 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 5 176 9.5E-57 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Tlie_1075 f95d47469da12288f0e3f2bb057408fb 176 PIRSF PIRSF015617 1 176 2.1E-64 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Tlie_1075 f95d47469da12288f0e3f2bb057408fb 176 Gene3D G3DSA:3.40.50.300 2 176 1.2E-66 T 14-10-2018 Tlie_0369 e0488fc3840772f877c61dc54d5479a7 329 Gene3D G3DSA:3.40.800.10 7 327 8.8E-73 T 14-10-2018 Tlie_0369 e0488fc3840772f877c61dc54d5479a7 329 SUPERFAMILY SSF52768 16 321 3.6E-62 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily Tlie_0369 e0488fc3840772f877c61dc54d5479a7 329 PIRSF PIRSF036979 26 324 1.7E-33 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Tlie_0369 e0488fc3840772f877c61dc54d5479a7 329 Pfam PF00491 Arginase family 43 316 1.5E-47 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Tlie_0295 5e834c56e4c53de835488a165f285498 305 Hamap MF_00313 Glutaminase [glsA]. 1 305 44.766 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Tlie_0295 5e834c56e4c53de835488a165f285498 305 SUPERFAMILY SSF56601 4 303 6.31E-108 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tlie_0295 5e834c56e4c53de835488a165f285498 305 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 304 5.7E-115 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Tlie_0295 5e834c56e4c53de835488a165f285498 305 Gene3D G3DSA:3.40.710.10 1 305 1.6E-116 T 14-10-2018 Tlie_0295 5e834c56e4c53de835488a165f285498 305 Pfam PF04960 Glutaminase 19 303 3.6E-114 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Tlie_1045 74cbd23756f9fdb88dffc1644c80701a 283 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 84 97 - T 14-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Tlie_1045 74cbd23756f9fdb88dffc1644c80701a 283 Gene3D G3DSA:3.40.50.150 58 278 9.6E-70 T 14-10-2018 Tlie_1045 74cbd23756f9fdb88dffc1644c80701a 283 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 8 278 38.466 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Tlie_1045 74cbd23756f9fdb88dffc1644c80701a 283 Pfam PF17284 Spermidine synthase tetramerisation domain 8 60 2.1E-15 T 14-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Tlie_1045 74cbd23756f9fdb88dffc1644c80701a 283 Pfam PF01564 Spermine/spermidine synthase domain 63 241 1.5E-60 T 14-10-2018 Tlie_1045 74cbd23756f9fdb88dffc1644c80701a 283 SUPERFAMILY SSF53335 7 278 3.54E-84 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_1045 74cbd23756f9fdb88dffc1644c80701a 283 Gene3D G3DSA:2.30.140.10 6 56 6.5E-18 T 14-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Tlie_1045 74cbd23756f9fdb88dffc1644c80701a 283 TIGRFAM TIGR00417 speE: spermidine synthase 9 272 2.7E-96 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Tlie_0623 2c465dba2b68680a665a9f4d1263e092 576 Gene3D G3DSA:3.30.1390.30 76 154 6.5E-42 T 14-10-2018 Tlie_0623 2c465dba2b68680a665a9f4d1263e092 576 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 11 571 1.1E-180 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tlie_0623 2c465dba2b68680a665a9f4d1263e092 576 Gene3D G3DSA:3.90.1310.10 55 238 6.5E-42 T 14-10-2018 Tlie_0623 2c465dba2b68680a665a9f4d1263e092 576 Pfam PF00905 Penicillin binding protein transpeptidase domain 261 568 9.7E-70 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Tlie_0623 2c465dba2b68680a665a9f4d1263e092 576 Pfam PF03717 Penicillin-binding Protein dimerisation domain 55 228 1.3E-35 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Tlie_0623 2c465dba2b68680a665a9f4d1263e092 576 SUPERFAMILY SSF56601 244 571 4.27E-98 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tlie_0623 2c465dba2b68680a665a9f4d1263e092 576 SUPERFAMILY SSF56519 47 243 9.68E-40 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Tlie_0623 2c465dba2b68680a665a9f4d1263e092 576 Gene3D G3DSA:3.40.710.10 243 573 9.3E-102 T 14-10-2018 Tlie_1493 872ba1829eb77cad3097c0a0262a011e 206 Gene3D G3DSA:3.30.2320.30 88 203 7.6E-12 T 14-10-2018 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1493 872ba1829eb77cad3097c0a0262a011e 206 SUPERFAMILY SSF160527 89 197 2.62E-11 T 14-10-2018 Tlie_1493 872ba1829eb77cad3097c0a0262a011e 206 Pfam PF01991 ATP synthase (E/31 kDa) subunit 18 180 4.4E-13 T 14-10-2018 IPR002842 V-type ATPase subunit E GO:0015991|GO:0033178|GO:0046961 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0370 62c399a3b506e81f45762fa7e8940f71 678 PIRSF PIRSF001423 68 656 1.9E-180 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_0370 62c399a3b506e81f45762fa7e8940f71 678 Gene3D G3DSA:3.40.1770.10 79 222 6.4E-46 T 14-10-2018 Tlie_0370 62c399a3b506e81f45762fa7e8940f71 678 Gene3D G3DSA:3.40.1770.10 446 649 3.0E-88 T 14-10-2018 Tlie_0370 62c399a3b506e81f45762fa7e8940f71 678 Pfam PF17392 Urocanase C-terminal domain 445 642 3.7E-82 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_0370 62c399a3b506e81f45762fa7e8940f71 678 Pfam PF17391 Urocanase N-terminal domain 90 214 6.3E-51 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_0370 62c399a3b506e81f45762fa7e8940f71 678 Pfam PF01175 Urocanase Rossmann-like domain 217 440 5.3E-84 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_0370 62c399a3b506e81f45762fa7e8940f71 678 TIGRFAM TIGR01228 hutU: urocanate hydratase 100 645 3.2E-135 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_0370 62c399a3b506e81f45762fa7e8940f71 678 SUPERFAMILY SSF111326 89 646 4.45E-226 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_0370 62c399a3b506e81f45762fa7e8940f71 678 Gene3D G3DSA:3.40.50.10730 223 438 1.8E-80 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_0370 62c399a3b506e81f45762fa7e8940f71 678 ProSitePatterns PS01233 Urocanase signature. 538 553 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_0370 62c399a3b506e81f45762fa7e8940f71 678 Hamap MF_00577 Urocanate hydratase [hutU]. 59 658 43.836 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_1245 07d4e984b068792cc6706b7fbd0fa728 452 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 429 22.931 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_1245 07d4e984b068792cc6706b7fbd0fa728 452 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 402 419 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_1245 07d4e984b068792cc6706b7fbd0fa728 452 Pfam PF00342 Phosphoglucose isomerase 61 429 1.3E-33 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_1245 07d4e984b068792cc6706b7fbd0fa728 452 SUPERFAMILY SSF53697 33 440 5.24E-106 T 14-10-2018 Tlie_1245 07d4e984b068792cc6706b7fbd0fa728 452 Gene3D G3DSA:3.40.50.10490 44 430 2.0E-135 T 14-10-2018 Tlie_1245 07d4e984b068792cc6706b7fbd0fa728 452 PRINTS PR00662 Glucose-6-phosphate isomerase signature 388 402 3.0E-21 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_1245 07d4e984b068792cc6706b7fbd0fa728 452 PRINTS PR00662 Glucose-6-phosphate isomerase signature 402 415 3.0E-21 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_1245 07d4e984b068792cc6706b7fbd0fa728 452 PRINTS PR00662 Glucose-6-phosphate isomerase signature 69 88 3.0E-21 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_1245 07d4e984b068792cc6706b7fbd0fa728 452 PRINTS PR00662 Glucose-6-phosphate isomerase signature 370 388 3.0E-21 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_1245 07d4e984b068792cc6706b7fbd0fa728 452 PRINTS PR00662 Glucose-6-phosphate isomerase signature 189 207 3.0E-21 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_1245 07d4e984b068792cc6706b7fbd0fa728 452 PRINTS PR00662 Glucose-6-phosphate isomerase signature 265 286 3.0E-21 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_1245 07d4e984b068792cc6706b7fbd0fa728 452 Gene3D G3DSA:3.40.50.10490 50 213 2.0E-135 T 14-10-2018 Tlie_1451 5f17af9ee8ce381b67b7ecf80390db97 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 209 219 2.5E-8 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tlie_1451 5f17af9ee8ce381b67b7ecf80390db97 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.5E-8 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tlie_1451 5f17af9ee8ce381b67b7ecf80390db97 561 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.5E-8 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tlie_1451 5f17af9ee8ce381b67b7ecf80390db97 561 Gene3D G3DSA:3.40.50.620 28 246 1.6E-107 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1451 5f17af9ee8ce381b67b7ecf80390db97 561 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 532 9.6E-61 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tlie_1451 5f17af9ee8ce381b67b7ecf80390db97 561 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 27 335 7.5E-111 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Tlie_1451 5f17af9ee8ce381b67b7ecf80390db97 561 Gene3D G3DSA:1.10.1160.10 260 338 6.5E-35 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 Tlie_1451 5f17af9ee8ce381b67b7ecf80390db97 561 Gene3D G3DSA:3.90.800.10 100 208 1.6E-107 T 14-10-2018 Tlie_1451 5f17af9ee8ce381b67b7ecf80390db97 561 SUPERFAMILY SSF52374 16 336 5.89E-101 T 14-10-2018 Tlie_1451 5f17af9ee8ce381b67b7ecf80390db97 561 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 554 1.0E-231 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tlie_1451 5f17af9ee8ce381b67b7ecf80390db97 561 SUPERFAMILY SSF50715 340 551 1.67E-73 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tlie_1451 5f17af9ee8ce381b67b7ecf80390db97 561 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 552 52.057 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 Tlie_1451 5f17af9ee8ce381b67b7ecf80390db97 561 Gene3D G3DSA:2.40.240.10 340 549 9.8E-83 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tlie_1451 5f17af9ee8ce381b67b7ecf80390db97 561 Gene3D G3DSA:2.40.240.10 347 465 9.8E-83 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tlie_1451 5f17af9ee8ce381b67b7ecf80390db97 561 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0663 499ec4b3923942728b1920cefbc20fc3 171 Gene3D G3DSA:3.30.230.10 77 168 3.6E-30 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tlie_0663 499ec4b3923942728b1920cefbc20fc3 171 Gene3D G3DSA:3.30.160.20 10 76 4.3E-27 T 14-10-2018 Tlie_0663 499ec4b3923942728b1920cefbc20fc3 171 SUPERFAMILY SSF54211 83 163 6.57E-23 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_0663 499ec4b3923942728b1920cefbc20fc3 171 Pfam PF00333 Ribosomal protein S5, N-terminal domain 14 77 8.1E-26 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Tlie_0663 499ec4b3923942728b1920cefbc20fc3 171 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 12 163 8.4E-58 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Tlie_0663 499ec4b3923942728b1920cefbc20fc3 171 Pfam PF03719 Ribosomal protein S5, C-terminal domain 90 161 1.9E-27 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Tlie_0663 499ec4b3923942728b1920cefbc20fc3 171 SUPERFAMILY SSF54768 12 78 5.86E-20 T 14-10-2018 Tlie_0663 499ec4b3923942728b1920cefbc20fc3 171 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 167 30.862 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Tlie_1478 613b778d1489ccf65c385519016608a1 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 10 263 1.3E-58 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tlie_1478 613b778d1489ccf65c385519016608a1 276 Gene3D G3DSA:3.40.50.970 1 273 8.1E-117 T 14-10-2018 Tlie_1478 613b778d1489ccf65c385519016608a1 276 SUPERFAMILY SSF52518 6 271 2.95E-96 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1478 613b778d1489ccf65c385519016608a1 276 ProSitePatterns PS00801 Transketolase signature 1. 17 37 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tlie_0489 5bd22511c2eb84116fc560e0a9647515 645 Gene3D G3DSA:1.10.569.10 267 426 1.1E-76 T 14-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Tlie_0489 5bd22511c2eb84116fc560e0a9647515 645 SUPERFAMILY SSF48310 209 612 1.44E-75 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_0489 5bd22511c2eb84116fc560e0a9647515 645 SMART SM00790 4 205 1.2E-93 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_0489 5bd22511c2eb84116fc560e0a9647515 645 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 6 203 3.6E-66 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_0489 5bd22511c2eb84116fc560e0a9647515 645 SUPERFAMILY SSF56228 1 206 1.31E-63 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_0489 5bd22511c2eb84116fc560e0a9647515 645 Gene3D G3DSA:1.10.599.10 427 611 1.1E-76 T 14-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Tlie_0489 5bd22511c2eb84116fc560e0a9647515 645 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 220 611 1.2E-79 T 14-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_0489 5bd22511c2eb84116fc560e0a9647515 645 Gene3D G3DSA:3.60.9.10 1 209 2.0E-73 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_0268 421734c737e6a80a9773ae582e86dbb3 87 SUPERFAMILY SSF143430 1 80 2.62E-23 T 14-10-2018 Tlie_0268 421734c737e6a80a9773ae582e86dbb3 87 Gene3D G3DSA:3.30.70.240 1 66 7.3E-27 T 14-10-2018 Tlie_0268 421734c737e6a80a9773ae582e86dbb3 87 Pfam PF09827 CRISPR associated protein Cas2 1 70 3.7E-18 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Tlie_0268 421734c737e6a80a9773ae582e86dbb3 87 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 82 3.1E-10 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Tlie_0268 421734c737e6a80a9773ae582e86dbb3 87 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 87 13.038 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Tlie_1735 3d19f7deeff852b71e391e46140da9df 400 SUPERFAMILY SSF55031 176 273 7.18E-13 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tlie_1735 3d19f7deeff852b71e391e46140da9df 400 Gene3D G3DSA:3.30.70.360 176 301 8.5E-80 T 14-10-2018 Tlie_1735 3d19f7deeff852b71e391e46140da9df 400 Pfam PF07687 Peptidase dimerisation domain 173 278 5.2E-16 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Tlie_1735 3d19f7deeff852b71e391e46140da9df 400 Gene3D G3DSA:3.40.630.10 14 382 8.5E-80 T 14-10-2018 Tlie_1735 3d19f7deeff852b71e391e46140da9df 400 SUPERFAMILY SSF53187 4 389 5.76E-51 T 14-10-2018 Tlie_1735 3d19f7deeff852b71e391e46140da9df 400 Pfam PF01546 Peptidase family M20/M25/M40 68 386 1.7E-22 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tlie_1076 635b6a34bbc9b619b054c3864a609dc6 759 Gene3D G3DSA:3.30.110.120 255 372 2.1E-141 T 14-10-2018 Tlie_1076 635b6a34bbc9b619b054c3864a609dc6 759 SUPERFAMILY SSF55821 176 392 5.19E-44 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Tlie_1076 635b6a34bbc9b619b054c3864a609dc6 759 Pfam PF07503 HypF finger 109 142 1.5E-16 T 14-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 Tlie_1076 635b6a34bbc9b619b054c3864a609dc6 759 Pfam PF07503 HypF finger 159 191 2.8E-17 T 14-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 Tlie_1076 635b6a34bbc9b619b054c3864a609dc6 759 Pfam PF00708 Acylphosphatase 7 82 1.5E-16 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tlie_1076 635b6a34bbc9b619b054c3864a609dc6 759 Gene3D G3DSA:3.30.420.350 490 740 1.3E-120 T 14-10-2018 Tlie_1076 635b6a34bbc9b619b054c3864a609dc6 759 Gene3D G3DSA:3.90.870.50 7 363 2.1E-141 T 14-10-2018 Tlie_1076 635b6a34bbc9b619b054c3864a609dc6 759 Pfam PF01300 Telomere recombination 213 384 6.7E-45 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 Tlie_1076 635b6a34bbc9b619b054c3864a609dc6 759 Gene3D G3DSA:3.30.420.360 384 753 1.3E-120 T 14-10-2018 Tlie_1076 635b6a34bbc9b619b054c3864a609dc6 759 PIRSF PIRSF006256 1 759 1.2E-267 T 14-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 Tlie_1076 635b6a34bbc9b619b054c3864a609dc6 759 SUPERFAMILY SSF54975 3 88 8.07E-19 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tlie_1076 635b6a34bbc9b619b054c3864a609dc6 759 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 7 753 2.8E-234 T 14-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 Tlie_0492 de30417e99f4a5367660b3d6ba3818fc 803 PIRSF PIRSF036289 1 802 4.9E-214 T 14-10-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase Tlie_0492 de30417e99f4a5367660b3d6ba3818fc 803 SUPERFAMILY SSF48208 270 784 5.78E-106 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Tlie_0492 de30417e99f4a5367660b3d6ba3818fc 803 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 8 263 1.0E-68 T 14-10-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 Tlie_0492 de30417e99f4a5367660b3d6ba3818fc 803 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 323 734 1.2E-138 T 14-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 Tlie_0492 de30417e99f4a5367660b3d6ba3818fc 803 Gene3D G3DSA:1.50.10.10 318 721 2.8E-154 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Tlie_0492 de30417e99f4a5367660b3d6ba3818fc 803 Gene3D G3DSA:2.70.98.40 1 266 1.3E-81 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Tlie_0492 de30417e99f4a5367660b3d6ba3818fc 803 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 739 791 4.3E-12 T 14-10-2018 IPR005194 Glycoside hydrolase family 65, C-terminal Tlie_0492 de30417e99f4a5367660b3d6ba3818fc 803 Gene3D G3DSA:2.60.420.10 722 799 7.8E-15 T 14-10-2018 Tlie_0492 de30417e99f4a5367660b3d6ba3818fc 803 SUPERFAMILY SSF74650 2 264 5.02E-69 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Tlie_0880 acd3943129cbe20b5bfac69d16464e7d 309 Pfam PF00551 Formyl transferase 23 180 2.2E-29 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tlie_0880 acd3943129cbe20b5bfac69d16464e7d 309 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 303 26.59 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Tlie_0880 acd3943129cbe20b5bfac69d16464e7d 309 SUPERFAMILY SSF53328 3 204 1.31E-51 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tlie_0880 acd3943129cbe20b5bfac69d16464e7d 309 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 296 2.5E-69 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Tlie_0880 acd3943129cbe20b5bfac69d16464e7d 309 Gene3D G3DSA:3.10.25.10 207 306 2.1E-23 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tlie_0880 acd3943129cbe20b5bfac69d16464e7d 309 SUPERFAMILY SSF50486 205 306 7.38E-27 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Tlie_0880 acd3943129cbe20b5bfac69d16464e7d 309 Gene3D G3DSA:3.40.50.170 2 206 2.3E-58 T 14-10-2018 Tlie_0880 acd3943129cbe20b5bfac69d16464e7d 309 Pfam PF02911 Formyl transferase, C-terminal domain 204 300 2.6E-24 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tlie_0714 e0af6df2000ec18fc025b0c319a2eb65 219 Gene3D G3DSA:1.10.340.30 18 133 1.6E-33 T 14-10-2018 Tlie_0714 e0af6df2000ec18fc025b0c319a2eb65 219 Gene3D G3DSA:1.10.1670.10 134 219 4.1E-14 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Tlie_0714 e0af6df2000ec18fc025b0c319a2eb65 219 Pfam PF00633 Helix-hairpin-helix motif 113 133 5.1E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Tlie_0714 e0af6df2000ec18fc025b0c319a2eb65 219 PIRSF PIRSF001435 1 218 3.3E-65 T 14-10-2018 Tlie_0714 e0af6df2000ec18fc025b0c319a2eb65 219 SUPERFAMILY SSF48150 6 215 1.19E-51 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Tlie_0714 e0af6df2000ec18fc025b0c319a2eb65 219 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 31 175 2.3E-14 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Tlie_0714 e0af6df2000ec18fc025b0c319a2eb65 219 SMART SM00478 35 194 1.4E-31 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Tlie_0579 54721382108d0f98a45c6c31b0092017 218 Hamap MF_00494 Probable transaldolase [tal]. 1 214 46.649 T 14-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Tlie_0579 54721382108d0f98a45c6c31b0092017 218 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Tlie_0579 54721382108d0f98a45c6c31b0092017 218 SUPERFAMILY SSF51569 1 212 1.15E-80 T 14-10-2018 Tlie_0579 54721382108d0f98a45c6c31b0092017 218 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 200 9.5E-60 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Tlie_0579 54721382108d0f98a45c6c31b0092017 218 Gene3D G3DSA:3.20.20.70 1 216 2.0E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0579 54721382108d0f98a45c6c31b0092017 218 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Tlie_0579 54721382108d0f98a45c6c31b0092017 218 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 211 1.2E-96 T 14-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Tlie_1403 5380347ff7223481f03b916c75a486b7 177 Pfam PF02151 UvrB/uvrC motif 140 171 2.4E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 Tlie_1403 5380347ff7223481f03b916c75a486b7 177 SUPERFAMILY SSF46600 133 171 7.19E-7 T 14-10-2018 IPR036876 UVR domain superfamily Tlie_1403 5380347ff7223481f03b916c75a486b7 177 PIRSF PIRSF015034 1 176 6.9E-45 T 14-10-2018 IPR025542 YacH protein Tlie_1403 5380347ff7223481f03b916c75a486b7 177 Gene3D G3DSA:4.10.860.10 134 175 2.4E-5 T 14-10-2018 Tlie_0592 b95dd5842a698a33a771a25a5c9795e7 333 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 2 329 1.4E-125 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tlie_0592 b95dd5842a698a33a771a25a5c9795e7 333 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 115 2.0E-31 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Tlie_0592 b95dd5842a698a33a771a25a5c9795e7 333 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 328 34.044 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tlie_0592 b95dd5842a698a33a771a25a5c9795e7 333 PIRSF PIRSF000148 1 333 5.7E-124 T 14-10-2018 Tlie_0592 b95dd5842a698a33a771a25a5c9795e7 333 SUPERFAMILY SSF55347 125 315 8.04E-64 T 14-10-2018 Tlie_0592 b95dd5842a698a33a771a25a5c9795e7 333 SMART SM00859 2 117 1.5E-44 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Tlie_0592 b95dd5842a698a33a771a25a5c9795e7 333 Gene3D G3DSA:3.30.360.10 124 311 3.9E-132 T 14-10-2018 Tlie_0592 b95dd5842a698a33a771a25a5c9795e7 333 SUPERFAMILY SSF51735 1 153 4.94E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0592 b95dd5842a698a33a771a25a5c9795e7 333 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 135 314 2.3E-46 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tlie_0592 b95dd5842a698a33a771a25a5c9795e7 333 Gene3D G3DSA:3.40.50.720 3 325 3.9E-132 T 14-10-2018 Tlie_1489 13612107154eb3e7af3fc10c2249b6e7 572 SMART SM00490 256 337 8.5E-27 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_1489 13612107154eb3e7af3fc10c2249b6e7 572 SMART SM00487 24 220 1.1E-51 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tlie_1489 13612107154eb3e7af3fc10c2249b6e7 572 Gene3D G3DSA:3.40.50.300 214 448 2.6E-43 T 14-10-2018 Tlie_1489 13612107154eb3e7af3fc10c2249b6e7 572 SUPERFAMILY SSF52540 74 358 2.49E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1489 13612107154eb3e7af3fc10c2249b6e7 572 Pfam PF00270 DEAD/DEAH box helicase 29 194 5.6E-43 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tlie_1489 13612107154eb3e7af3fc10c2249b6e7 572 Gene3D G3DSA:3.40.50.300 5 210 1.3E-62 T 14-10-2018 Tlie_1489 13612107154eb3e7af3fc10c2249b6e7 572 Pfam PF00271 Helicase conserved C-terminal domain 231 337 8.6E-25 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_0743 acbbf8fe4d604935fc96c1570a541e9e 83 TIGRFAM TIGR00105 L31: ribosomal protein bL31 3 67 9.7E-27 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0743 acbbf8fe4d604935fc96c1570a541e9e 83 Pfam PF01197 Ribosomal protein L31 3 66 3.3E-28 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0743 acbbf8fe4d604935fc96c1570a541e9e 83 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 2 69 25.098 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0743 acbbf8fe4d604935fc96c1570a541e9e 83 PRINTS PR01249 Ribosomal protein L31 signature 3 20 1.2E-10 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0743 acbbf8fe4d604935fc96c1570a541e9e 83 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.2E-10 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0743 acbbf8fe4d604935fc96c1570a541e9e 83 Gene3D G3DSA:2.30.170.50 2 69 2.0E-27 T 14-10-2018 Tlie_0743 acbbf8fe4d604935fc96c1570a541e9e 83 SUPERFAMILY SSF143800 2 67 8.24E-21 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1530 f2bc5e083f314a188d7e66d7c6f9d523 343 Gene3D G3DSA:3.20.20.70 3 342 1.1E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1530 f2bc5e083f314a188d7e66d7c6f9d523 343 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 331 5.9E-59 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Tlie_1530 f2bc5e083f314a188d7e66d7c6f9d523 343 SUPERFAMILY SSF51395 3 335 3.66E-90 T 14-10-2018 Tlie_0599 9d8bd8c7e212328007985e09a9bd6bed 332 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 8.2E-48 T 14-10-2018 IPR017861 Kae1/TsaD family Tlie_0599 9d8bd8c7e212328007985e09a9bd6bed 332 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 99 118 8.2E-48 T 14-10-2018 IPR017861 Kae1/TsaD family Tlie_0599 9d8bd8c7e212328007985e09a9bd6bed 332 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 8.2E-48 T 14-10-2018 IPR017861 Kae1/TsaD family Tlie_0599 9d8bd8c7e212328007985e09a9bd6bed 332 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 78 98 8.2E-48 T 14-10-2018 IPR017861 Kae1/TsaD family Tlie_0599 9d8bd8c7e212328007985e09a9bd6bed 332 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 133 145 8.2E-48 T 14-10-2018 IPR017861 Kae1/TsaD family Tlie_0599 9d8bd8c7e212328007985e09a9bd6bed 332 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 156 177 8.2E-48 T 14-10-2018 IPR017861 Kae1/TsaD family Tlie_0599 9d8bd8c7e212328007985e09a9bd6bed 332 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 307 1.6E-110 T 14-10-2018 IPR017861 Kae1/TsaD family Tlie_0599 9d8bd8c7e212328007985e09a9bd6bed 332 Gene3D G3DSA:3.30.420.40 131 294 1.8E-120 T 14-10-2018 Tlie_0599 9d8bd8c7e212328007985e09a9bd6bed 332 SUPERFAMILY SSF53067 3 124 9.39E-27 T 14-10-2018 Tlie_0599 9d8bd8c7e212328007985e09a9bd6bed 332 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 4 314 1.2E-124 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Tlie_0599 9d8bd8c7e212328007985e09a9bd6bed 332 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 332 62.753 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Tlie_0599 9d8bd8c7e212328007985e09a9bd6bed 332 Pfam PF00814 Glycoprotease family 24 307 5.8E-96 T 14-10-2018 IPR000905 Gcp-like domain Tlie_0599 9d8bd8c7e212328007985e09a9bd6bed 332 SUPERFAMILY SSF53067 104 312 6.19E-43 T 14-10-2018 Tlie_0599 9d8bd8c7e212328007985e09a9bd6bed 332 ProSitePatterns PS01016 Glycoprotease family signature. 98 118 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 Tlie_0599 9d8bd8c7e212328007985e09a9bd6bed 332 Gene3D G3DSA:3.30.420.40 4 316 1.8E-120 T 14-10-2018 Tlie_1373 88927264897307c0d6a0e43688fa7072 287 Gene3D G3DSA:3.40.50.970 5 285 1.7E-93 T 14-10-2018 Tlie_1373 88927264897307c0d6a0e43688fa7072 287 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 14 245 4.4E-44 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tlie_1373 88927264897307c0d6a0e43688fa7072 287 SUPERFAMILY SSF52518 4 259 2.84E-78 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1070 09175f383f713499a09fa1a01c339cd0 95 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 5 95 0.001 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 Tlie_1070 09175f383f713499a09fa1a01c339cd0 95 Pfam PF01371 Trp repressor protein 11 92 1.2E-28 T 14-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 Tlie_1070 09175f383f713499a09fa1a01c339cd0 95 Gene3D G3DSA:1.10.1270.10 1 95 4.4E-36 T 14-10-2018 IPR038116 TrpR-like superfamily Tlie_1070 09175f383f713499a09fa1a01c339cd0 95 PIRSF PIRSF012508 1 95 1.3E-42 T 14-10-2018 IPR013368 TrpR homologue YerC/YecD Tlie_1070 09175f383f713499a09fa1a01c339cd0 95 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 6 93 2.0E-38 T 14-10-2018 IPR013368 TrpR homologue YerC/YecD Tlie_1070 09175f383f713499a09fa1a01c339cd0 95 SUPERFAMILY SSF48295 2 93 3.77E-29 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Tlie_1405 9edb75413b08e61bd0788ed3e73dd517 198 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 6 196 5.8E-51 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Tlie_1405 9edb75413b08e61bd0788ed3e73dd517 198 SMART SM01207 9 187 4.9E-74 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Tlie_1405 9edb75413b08e61bd0788ed3e73dd517 198 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 6 195 19.486 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Tlie_1405 9edb75413b08e61bd0788ed3e73dd517 198 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 186 1.3E-49 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Tlie_1518 1eb13c3172fd55b72a6373030bd1b797 255 Pfam PF02698 DUF218 domain 85 247 9.9E-24 T 14-10-2018 IPR003848 Domain of unknown function DUF218 Tlie_1138 d3cd9374502f45119209345678d70145 645 Gene3D G3DSA:1.10.10.10 584 640 2.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1138 d3cd9374502f45119209345678d70145 645 Pfam PF03144 Elongation factor Tu domain 2 205 272 1.3E-8 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tlie_1138 d3cd9374502f45119209345678d70145 645 SUPERFAMILY SSF52540 12 180 4.27E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1138 d3cd9374502f45119209345678d70145 645 SUPERFAMILY SSF50465 279 369 1.51E-22 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Tlie_1138 d3cd9374502f45119209345678d70145 645 Gene3D G3DSA:1.10.10.2770 455 581 6.4E-13 T 14-10-2018 Tlie_1138 d3cd9374502f45119209345678d70145 645 Pfam PF09106 Elongation factor SelB, winged helix 462 515 1.5E-7 T 14-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Tlie_1138 d3cd9374502f45119209345678d70145 645 SUPERFAMILY SSF46785 451 522 8.16E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1138 d3cd9374502f45119209345678d70145 645 Gene3D G3DSA:3.40.50.300 15 181 9.0E-49 T 14-10-2018 Tlie_1138 d3cd9374502f45119209345678d70145 645 Pfam PF09107 Elongation factor SelB, winged helix 595 639 2.0E-16 T 14-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Tlie_1138 d3cd9374502f45119209345678d70145 645 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 175 8.4E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tlie_1138 d3cd9374502f45119209345678d70145 645 SUPERFAMILY SSF50447 186 273 7.28E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tlie_1138 d3cd9374502f45119209345678d70145 645 Gene3D G3DSA:2.40.30.10 291 372 5.6E-5 T 14-10-2018 Tlie_1138 d3cd9374502f45119209345678d70145 645 SUPERFAMILY SSF46785 587 640 1.13E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1138 d3cd9374502f45119209345678d70145 645 Gene3D G3DSA:2.40.30.10 186 277 3.2E-27 T 14-10-2018 Tlie_1138 d3cd9374502f45119209345678d70145 645 PRINTS PR00315 GTP-binding elongation factor signature 84 95 1.6E-6 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1138 d3cd9374502f45119209345678d70145 645 PRINTS PR00315 GTP-binding elongation factor signature 68 78 1.6E-6 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1138 d3cd9374502f45119209345678d70145 645 PRINTS PR00315 GTP-binding elongation factor signature 16 29 1.6E-6 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1138 d3cd9374502f45119209345678d70145 645 Pfam PF00009 Elongation factor Tu GTP binding domain 16 178 2.5E-33 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tlie_1138 d3cd9374502f45119209345678d70145 645 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 15 641 2.1E-112 T 14-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 Gene3D G3DSA:3.30.460.10 161 264 7.6E-24 T 14-10-2018 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 62 79 5.2E-5 T 14-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 302 319 5.2E-5 T 14-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 258 265 5.2E-5 T 14-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 SMART SM00278 55 74 1400.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 SMART SM00278 130 149 1.1 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 SMART SM00278 95 114 270.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 SUPERFAMILY SSF81301 173 320 1.9E-36 T 14-10-2018 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 PIRSF PIRSF005047 5 578 2.5E-203 T 14-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 Gene3D G3DSA:1.10.150.20 90 156 1.8E-20 T 14-10-2018 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 Pfam PF02811 PHP domain 347 466 1.4E-6 T 14-10-2018 IPR004013 PHP domain GO:0003824 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 Pfam PF14791 DNA polymerase beta thumb 258 320 1.9E-19 T 14-10-2018 IPR029398 DNA polymerase beta, thumb domain Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 Pfam PF14792 DNA polymerase beta palm 171 217 3.7E-6 T 14-10-2018 IPR028207 DNA polymerase beta, palm domain Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 SUPERFAMILY SSF89550 343 569 1.57E-51 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 Gene3D G3DSA:3.20.20.140 332 580 6.8E-73 T 14-10-2018 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 Gene3D G3DSA:1.10.150.110 1 89 7.0E-24 T 14-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 SUPERFAMILY SSF47781 95 155 8.89E-5 T 14-10-2018 IPR010994 RuvA domain 2-like Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 Pfam PF14520 Helix-hairpin-helix domain 96 148 4.0E-9 T 14-10-2018 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 SUPERFAMILY SSF47802 7 88 6.8E-18 T 14-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 SMART SM00483 4 320 1.1E-24 T 14-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 SMART SM00481 344 423 3.5E-15 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 Pfam PF14716 Helix-hairpin-helix domain 7 75 4.9E-20 T 14-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain Tlie_0353 7c3356efcb4664ebd29c8ce793008b6d 581 Gene3D G3DSA:3.30.210.10 265 331 1.1E-19 T 14-10-2018 IPR037160 DNA polymerase, thumb domain superfamily Tlie_1083 d92ea6e81ab5a8bfbd30cbb4baef236a 210 Hamap MF_00165 Thymidylate kinase [tmk]. 5 204 25.252 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Tlie_1083 d92ea6e81ab5a8bfbd30cbb4baef236a 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 192 2.9E-41 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Tlie_1083 d92ea6e81ab5a8bfbd30cbb4baef236a 210 Gene3D G3DSA:3.40.50.300 3 208 1.0E-55 T 14-10-2018 Tlie_1083 d92ea6e81ab5a8bfbd30cbb4baef236a 210 Pfam PF02223 Thymidylate kinase 9 192 1.3E-36 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Tlie_1083 d92ea6e81ab5a8bfbd30cbb4baef236a 210 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Tlie_1083 d92ea6e81ab5a8bfbd30cbb4baef236a 210 SUPERFAMILY SSF52540 2 205 8.77E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1048 91a6dcf4b619a872ea301b768efe0964 350 Pfam PF13180 PDZ domain 127 184 4.9E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tlie_1048 91a6dcf4b619a872ea301b768efe0964 350 SMART SM00228 113 186 3.4E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tlie_1048 91a6dcf4b619a872ea301b768efe0964 350 Pfam PF02163 Peptidase family M50 8 332 3.7E-61 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Tlie_1048 91a6dcf4b619a872ea301b768efe0964 350 Gene3D G3DSA:2.30.42.10 128 213 3.6E-13 T 14-10-2018 Tlie_1048 91a6dcf4b619a872ea301b768efe0964 350 SUPERFAMILY SSF50156 86 184 6.44E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Tlie_0518 a09917d47b70fb1cf48bbc8709cda97d 125 Pfam PF01592 NifU-like N terminal domain 1 121 1.0E-51 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Tlie_0518 a09917d47b70fb1cf48bbc8709cda97d 125 SUPERFAMILY SSF82649 4 121 3.14E-48 T 14-10-2018 Tlie_0518 a09917d47b70fb1cf48bbc8709cda97d 125 Gene3D G3DSA:3.90.1010.10 1 125 5.5E-62 T 14-10-2018 Tlie_0518 a09917d47b70fb1cf48bbc8709cda97d 125 TIGRFAM TIGR03419 NifU_clost: FeS cluster assembly scaffold protein NifU 2 121 1.9E-62 T 14-10-2018 IPR017787 NIF system FeS cluster assembly, NifU-like Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 Gene3D G3DSA:1.20.1090.10 334 520 9.6E-51 T 14-10-2018 Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 227 499 1.6E-96 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 SUPERFAMILY SSF56796 182 516 4.84E-87 T 14-10-2018 Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 173 520 56.117 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 Gene3D G3DSA:3.40.50.300 3 176 3.3E-43 T 14-10-2018 Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 SUPERFAMILY SSF52540 4 161 1.13E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 Hamap MF_00109 Shikimate kinase [aroK]. 3 165 23.793 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 PRINTS PR01100 Shikimate kinase family signature 30 43 4.7E-16 T 14-10-2018 Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 PRINTS PR01100 Shikimate kinase family signature 6 21 4.7E-16 T 14-10-2018 Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 PRINTS PR01100 Shikimate kinase family signature 97 114 4.7E-16 T 14-10-2018 Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 PRINTS PR01100 Shikimate kinase family signature 76 85 4.7E-16 T 14-10-2018 Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 PRINTS PR01100 Shikimate kinase family signature 58 66 4.7E-16 T 14-10-2018 Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 Pfam PF01202 Shikimate kinase 12 161 2.2E-35 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 Pfam PF01761 3-dehydroquinate synthase 228 484 2.5E-91 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 Gene3D G3DSA:3.40.50.1970 177 333 1.3E-48 T 14-10-2018 Tlie_1894 d1e5001036161e2be0fb62486a147c98 522 ProSitePatterns PS01128 Shikimate kinase signature. 59 84 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Tlie_0841 22ed82aa7d95f86909dbce58c38ed7c2 218 SUPERFAMILY SSF48008 79 209 1.86E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0841 22ed82aa7d95f86909dbce58c38ed7c2 218 SUPERFAMILY SSF46785 11 100 1.03E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_0841 22ed82aa7d95f86909dbce58c38ed7c2 218 Pfam PF07729 FCD domain 85 207 2.4E-28 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_0841 22ed82aa7d95f86909dbce58c38ed7c2 218 Gene3D G3DSA:1.20.120.530 77 211 5.4E-32 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0841 22ed82aa7d95f86909dbce58c38ed7c2 218 SMART SM00895 83 208 1.3E-22 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_0841 22ed82aa7d95f86909dbce58c38ed7c2 218 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 72 2.9E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0841 22ed82aa7d95f86909dbce58c38ed7c2 218 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.0E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0841 22ed82aa7d95f86909dbce58c38ed7c2 218 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.0E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0841 22ed82aa7d95f86909dbce58c38ed7c2 218 Gene3D G3DSA:1.10.10.10 8 73 2.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0841 22ed82aa7d95f86909dbce58c38ed7c2 218 SMART SM00345 15 73 5.1E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1913 1403b65466cc377565da8a4853b9eaa2 83 TIGRFAM TIGR01687 moaD_arch: MoaD family protein 3 83 1.9E-18 T 14-10-2018 IPR010038 MoaD, archaeal-type Tlie_1913 1403b65466cc377565da8a4853b9eaa2 83 Gene3D G3DSA:3.10.20.30 2 80 7.2E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Tlie_1913 1403b65466cc377565da8a4853b9eaa2 83 SUPERFAMILY SSF54285 3 83 2.24E-17 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Tlie_1913 1403b65466cc377565da8a4853b9eaa2 83 Pfam PF02597 ThiS family 4 83 1.5E-16 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Tlie_1023 5b38aca8cdd07a28ac96ff19238a000d 509 Gene3D G3DSA:1.20.200.10 198 502 6.0E-133 T 14-10-2018 Tlie_1023 5b38aca8cdd07a28ac96ff19238a000d 509 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 504 4.4E-210 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_1023 5b38aca8cdd07a28ac96ff19238a000d 509 SUPERFAMILY SSF48557 4 500 1.57E-206 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Tlie_1023 5b38aca8cdd07a28ac96ff19238a000d 509 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 503 45.662 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tlie_1023 5b38aca8cdd07a28ac96ff19238a000d 509 Pfam PF00221 Aromatic amino acid lyase 11 470 5.7E-208 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 Tlie_1023 5b38aca8cdd07a28ac96ff19238a000d 509 Gene3D G3DSA:1.10.275.10 3 197 2.3E-72 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Tlie_1023 5b38aca8cdd07a28ac96ff19238a000d 509 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 Tlie_0747 5dfc6937cdab0d642ac4290625faefe9 282 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 5 280 1.2E-56 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Tlie_0747 5dfc6937cdab0d642ac4290625faefe9 282 SUPERFAMILY SSF53335 3 277 3.91E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_0747 5dfc6937cdab0d642ac4290625faefe9 282 Pfam PF05175 Methyltransferase small domain 97 189 2.5E-9 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Tlie_0747 5dfc6937cdab0d642ac4290625faefe9 282 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 279 37.517 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Tlie_0747 5dfc6937cdab0d642ac4290625faefe9 282 Gene3D G3DSA:3.40.50.150 86 282 1.1E-49 T 14-10-2018 Tlie_0747 5dfc6937cdab0d642ac4290625faefe9 282 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 275 5.4E-70 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Tlie_0747 5dfc6937cdab0d642ac4290625faefe9 282 Gene3D G3DSA:1.10.8.10 1 85 5.0E-18 T 14-10-2018 Tlie_0747 5dfc6937cdab0d642ac4290625faefe9 282 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 183 189 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tlie_1269 3bd599291e301c81bba790e763e9f3ca 1065 SMART SM00487 225 420 3.9E-8 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tlie_1269 3bd599291e301c81bba790e763e9f3ca 1065 SUPERFAMILY SSF52540 309 825 6.96E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1269 3bd599291e301c81bba790e763e9f3ca 1065 SUPERFAMILY SSF52540 154 398 3.43E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1269 3bd599291e301c81bba790e763e9f3ca 1065 SMART SM00490 700 802 1.2E-8 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_1269 3bd599291e301c81bba790e763e9f3ca 1065 Gene3D G3DSA:3.40.50.10810 227 430 3.0E-24 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Tlie_1269 3bd599291e301c81bba790e763e9f3ca 1065 Pfam PF00271 Helicase conserved C-terminal domain 682 802 5.6E-13 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_1269 3bd599291e301c81bba790e763e9f3ca 1065 Pfam PF04851 Type III restriction enzyme, res subunit 228 384 8.8E-6 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Tlie_1269 3bd599291e301c81bba790e763e9f3ca 1065 Gene3D G3DSA:3.40.50.300 630 828 2.6E-30 T 14-10-2018 Tlie_1897 965286b423ae0f63e4a139887f4f21bd 438 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 16 427 1.7E-116 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Tlie_1897 965286b423ae0f63e4a139887f4f21bd 438 ProSitePatterns PS00885 EPSP synthase signature 2. 341 359 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Tlie_1897 965286b423ae0f63e4a139887f4f21bd 438 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 12 430 32.205 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Tlie_1897 965286b423ae0f63e4a139887f4f21bd 438 PIRSF PIRSF000505 3 433 2.5E-112 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Tlie_1897 965286b423ae0f63e4a139887f4f21bd 438 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 13 424 7.7E-108 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Tlie_1897 965286b423ae0f63e4a139887f4f21bd 438 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Tlie_1897 965286b423ae0f63e4a139887f4f21bd 438 SUPERFAMILY SSF55205 12 427 1.39E-117 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Tlie_1897 965286b423ae0f63e4a139887f4f21bd 438 Gene3D G3DSA:3.65.10.10 16 421 5.1E-138 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Tlie_1897 965286b423ae0f63e4a139887f4f21bd 438 Gene3D G3DSA:3.65.10.10 24 231 5.1E-138 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Tlie_0160 a5faf331a18a65df6d50e0000aa4de8b 352 SUPERFAMILY SSF51735 140 314 2.1E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0160 a5faf331a18a65df6d50e0000aa4de8b 352 Gene3D G3DSA:3.90.180.10 20 337 1.6E-114 T 14-10-2018 Tlie_0160 a5faf331a18a65df6d50e0000aa4de8b 352 Pfam PF00107 Zinc-binding dehydrogenase 177 269 6.0E-19 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Tlie_0160 a5faf331a18a65df6d50e0000aa4de8b 352 Gene3D G3DSA:3.40.50.720 162 292 1.6E-114 T 14-10-2018 Tlie_0160 a5faf331a18a65df6d50e0000aa4de8b 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Tlie_0160 a5faf331a18a65df6d50e0000aa4de8b 352 SMART SM00829 7 350 1.1E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Tlie_0160 a5faf331a18a65df6d50e0000aa4de8b 352 SUPERFAMILY SSF50129 1 182 2.36E-55 T 14-10-2018 IPR011032 GroES-like superfamily Tlie_0160 a5faf331a18a65df6d50e0000aa4de8b 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 128 1.5E-15 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 5 348 39.588 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 7 129 5.2E-37 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 Gene3D G3DSA:3.40.50.880 152 347 2.0E-36 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 8 346 1.9E-116 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 PRINTS PR00096 Glutamine amidotransferase superfamily signature 207 216 3.1E-11 T 14-10-2018 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 PRINTS PR00096 Glutamine amidotransferase superfamily signature 320 333 3.1E-11 T 14-10-2018 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 PRINTS PR00096 Glutamine amidotransferase superfamily signature 234 245 3.1E-11 T 14-10-2018 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 165 179 3.2E-33 T 14-10-2018 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 276 287 3.2E-33 T 14-10-2018 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 204 218 3.2E-33 T 14-10-2018 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 251 268 3.2E-33 T 14-10-2018 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 234 250 3.2E-33 T 14-10-2018 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 SUPERFAMILY SSF52317 140 346 2.06E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 Pfam PF00117 Glutamine amidotransferase class-I 167 343 1.1E-45 T 14-10-2018 IPR017926 Glutamine amidotransferase Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 Gene3D G3DSA:3.50.30.20 4 147 2.1E-38 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 PRINTS PR00097 Anthranilate synthase component II signature 320 333 6.3E-7 T 14-10-2018 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 PRINTS PR00097 Anthranilate synthase component II signature 234 245 6.3E-7 T 14-10-2018 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 PRINTS PR00097 Anthranilate synthase component II signature 207 216 6.3E-7 T 14-10-2018 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 SUPERFAMILY SSF52021 6 139 1.44E-37 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1263 046b86cff97a2fcfb6f6301127ea23a3 348 SMART SM01097 5 130 1.7E-44 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_0732 4d453f47ba56c9d4836d877a9bd44769 221 Pfam PF02080 TrkA-C domain 159 220 1.3E-12 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Tlie_0732 4d453f47ba56c9d4836d877a9bd44769 221 Gene3D G3DSA:3.30.70.1450 145 220 4.1E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tlie_0732 4d453f47ba56c9d4836d877a9bd44769 221 Gene3D G3DSA:3.40.50.720 5 144 9.3E-30 T 14-10-2018 Tlie_0732 4d453f47ba56c9d4836d877a9bd44769 221 SUPERFAMILY SSF116726 141 220 1.16E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tlie_0732 4d453f47ba56c9d4836d877a9bd44769 221 Pfam PF02254 TrkA-N domain 11 126 5.8E-24 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Tlie_0732 4d453f47ba56c9d4836d877a9bd44769 221 SUPERFAMILY SSF51735 10 139 1.11E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0267 6dd9baecea17dad03a32ca2e66a49852 331 Gene3D G3DSA:1.20.120.920 82 327 2.8E-72 T 14-10-2018 Tlie_0267 6dd9baecea17dad03a32ca2e66a49852 331 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 2 316 26.741 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Tlie_0267 6dd9baecea17dad03a32ca2e66a49852 331 Gene3D G3DSA:3.100.10.20 2 81 5.2E-31 T 14-10-2018 Tlie_0267 6dd9baecea17dad03a32ca2e66a49852 331 TIGRFAM TIGR03641 cas1_HMARI: CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP 3 331 3.6E-137 T 14-10-2018 IPR019858 CRISPR-associated protein Cas1, HMARI/TNEAP subtype GO:0004520|GO:0043571|GO:0046872 Tlie_0267 6dd9baecea17dad03a32ca2e66a49852 331 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 4 326 2.8E-104 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Tlie_0267 6dd9baecea17dad03a32ca2e66a49852 331 Pfam PF01867 CRISPR associated protein Cas1 5 285 3.2E-96 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Tlie_0545 dc4ac87dfc94f5ae11d5907e00dc3e04 593 Gene3D G3DSA:3.10.20.310 111 183 9.5E-15 T 14-10-2018 Tlie_0545 dc4ac87dfc94f5ae11d5907e00dc3e04 593 Gene3D G3DSA:3.10.20.310 37 108 2.6E-14 T 14-10-2018 Tlie_0545 dc4ac87dfc94f5ae11d5907e00dc3e04 593 Gene3D G3DSA:3.10.20.310 185 260 4.0E-21 T 14-10-2018 Tlie_0545 dc4ac87dfc94f5ae11d5907e00dc3e04 593 Gene3D G3DSA:2.40.160.50 261 593 4.0E-34 T 14-10-2018 Tlie_0545 dc4ac87dfc94f5ae11d5907e00dc3e04 593 Pfam PF01103 Surface antigen 285 578 3.4E-28 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Tlie_0545 dc4ac87dfc94f5ae11d5907e00dc3e04 593 Pfam PF07244 Surface antigen variable number repeat 184 258 1.8E-14 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Tlie_0545 dc4ac87dfc94f5ae11d5907e00dc3e04 593 Pfam PF07244 Surface antigen variable number repeat 111 182 1.8E-9 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Tlie_0545 dc4ac87dfc94f5ae11d5907e00dc3e04 593 Pfam PF07244 Surface antigen variable number repeat 44 109 3.9E-8 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Tlie_0097 b02ec333171712d6a154de2e45d147d7 120 SMART SM00448 2 114 2.0E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0097 b02ec333171712d6a154de2e45d147d7 120 Pfam PF00072 Response regulator receiver domain 4 115 3.8E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0097 b02ec333171712d6a154de2e45d147d7 120 Gene3D G3DSA:3.40.50.2300 2 120 1.7E-35 T 14-10-2018 Tlie_0097 b02ec333171712d6a154de2e45d147d7 120 SUPERFAMILY SSF52172 3 119 7.12E-36 T 14-10-2018 IPR011006 CheY-like superfamily Tlie_1871 5d6c341d719a5b4a19f53e188dc433b0 502 Pfam PF01293 Phosphoenolpyruvate carboxykinase 70 454 4.5E-45 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Tlie_1871 5d6c341d719a5b4a19f53e188dc433b0 502 Gene3D G3DSA:3.40.449.10 70 185 5.1E-37 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Tlie_1871 5d6c341d719a5b4a19f53e188dc433b0 502 SUPERFAMILY SSF68923 25 179 1.28E-5 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Tlie_1871 5d6c341d719a5b4a19f53e188dc433b0 502 Gene3D G3DSA:3.90.228.20 186 483 5.1E-37 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Tlie_1871 5d6c341d719a5b4a19f53e188dc433b0 502 SUPERFAMILY SSF53795 188 501 6.64E-50 T 14-10-2018 Tlie_1871 5d6c341d719a5b4a19f53e188dc433b0 502 Gene3D G3DSA:2.170.8.10 257 314 5.1E-37 T 14-10-2018 Tlie_1492 510ad3d6faba7e0bba4f5363102102f7 593 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 85 205 8.3E-35 T 14-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1492 510ad3d6faba7e0bba4f5363102102f7 593 SUPERFAMILY SSF50615 2 71 6.47E-12 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_1492 510ad3d6faba7e0bba4f5363102102f7 593 Gene3D G3DSA:3.40.50.300 73 435 2.4E-171 T 14-10-2018 Tlie_1492 510ad3d6faba7e0bba4f5363102102f7 593 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 214 435 6.4E-92 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_1492 510ad3d6faba7e0bba4f5363102102f7 593 Gene3D G3DSA:1.10.1140.10 436 584 3.4E-36 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_1492 510ad3d6faba7e0bba4f5363102102f7 593 SUPERFAMILY SSF52540 173 438 4.48E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1492 510ad3d6faba7e0bba4f5363102102f7 593 Gene3D G3DSA:2.40.30.20 2 72 2.7E-26 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_1492 510ad3d6faba7e0bba4f5363102102f7 593 SUPERFAMILY SSF47917 448 538 2.88E-16 T 14-10-2018 Tlie_1492 510ad3d6faba7e0bba4f5363102102f7 593 Gene3D G3DSA:2.40.50.100 116 187 2.4E-171 T 14-10-2018 Tlie_1492 510ad3d6faba7e0bba4f5363102102f7 593 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 7 69 1.4E-10 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_1492 510ad3d6faba7e0bba4f5363102102f7 593 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 2 586 49.487 T 14-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1492 510ad3d6faba7e0bba4f5363102102f7 593 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 426 435 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_1844 b7e19afbc79a0292d8269e345f698f87 198 Gene3D G3DSA:3.40.50.880 1 190 2.6E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_1844 b7e19afbc79a0292d8269e345f698f87 198 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 43 57 4.0E-9 T 14-10-2018 Tlie_1844 b7e19afbc79a0292d8269e345f698f87 198 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 73 89 4.0E-9 T 14-10-2018 Tlie_1844 b7e19afbc79a0292d8269e345f698f87 198 PRINTS PR00097 Anthranilate synthase component II signature 98 106 3.0E-37 T 14-10-2018 Tlie_1844 b7e19afbc79a0292d8269e345f698f87 198 PRINTS PR00097 Anthranilate synthase component II signature 73 84 3.0E-37 T 14-10-2018 Tlie_1844 b7e19afbc79a0292d8269e345f698f87 198 PRINTS PR00097 Anthranilate synthase component II signature 118 130 3.0E-37 T 14-10-2018 Tlie_1844 b7e19afbc79a0292d8269e345f698f87 198 PRINTS PR00097 Anthranilate synthase component II signature 163 176 3.0E-37 T 14-10-2018 Tlie_1844 b7e19afbc79a0292d8269e345f698f87 198 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.0E-37 T 14-10-2018 Tlie_1844 b7e19afbc79a0292d8269e345f698f87 198 PRINTS PR00097 Anthranilate synthase component II signature 46 55 3.0E-37 T 14-10-2018 Tlie_1844 b7e19afbc79a0292d8269e345f698f87 198 Pfam PF00117 Glutamine amidotransferase class-I 3 183 2.3E-53 T 14-10-2018 IPR017926 Glutamine amidotransferase Tlie_1844 b7e19afbc79a0292d8269e345f698f87 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 163 176 4.3E-15 T 14-10-2018 Tlie_1844 b7e19afbc79a0292d8269e345f698f87 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 46 55 4.3E-15 T 14-10-2018 Tlie_1844 b7e19afbc79a0292d8269e345f698f87 198 PRINTS PR00096 Glutamine amidotransferase superfamily signature 73 84 4.3E-15 T 14-10-2018 Tlie_1844 b7e19afbc79a0292d8269e345f698f87 198 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 2 184 5.6E-69 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tlie_1844 b7e19afbc79a0292d8269e345f698f87 198 SUPERFAMILY SSF52317 2 190 4.27E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_0095 96fb09a0714719cfd3980a3ee8b862b9 316 SUPERFAMILY SSF52540 39 290 9.51E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0095 96fb09a0714719cfd3980a3ee8b862b9 316 PIRSF PIRSF003092 15 314 4.0E-66 T 14-10-2018 IPR025501 ATP binding protein MinD Tlie_0095 96fb09a0714719cfd3980a3ee8b862b9 316 Gene3D G3DSA:3.40.50.300 39 285 9.9E-51 T 14-10-2018 Tlie_0095 96fb09a0714719cfd3980a3ee8b862b9 316 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 40 285 1.4E-17 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Tlie_1441 0fec67c4048e32aa59049ccc2e6cdc9d 227 SUPERFAMILY SSF56281 4 210 2.38E-31 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_1441 0fec67c4048e32aa59049ccc2e6cdc9d 227 Gene3D G3DSA:3.60.15.10 2 227 2.0E-78 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_1441 0fec67c4048e32aa59049ccc2e6cdc9d 227 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 2 227 35.557 T 14-10-2018 IPR022877 Protein of unknown funcion UPF0173 Tlie_1441 0fec67c4048e32aa59049ccc2e6cdc9d 227 SMART SM00849 8 192 6.5E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tlie_1441 0fec67c4048e32aa59049ccc2e6cdc9d 227 Pfam PF13483 Beta-lactamase superfamily domain 3 192 9.3E-25 T 14-10-2018 Tlie_0636 20812200e58e1cfa4338d0816f75bce0 373 Gene3D G3DSA:3.20.20.105 1 372 1.2E-170 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tlie_0636 20812200e58e1cfa4338d0816f75bce0 373 Pfam PF01702 Queuine tRNA-ribosyltransferase 133 362 4.5E-89 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tlie_0636 20812200e58e1cfa4338d0816f75bce0 373 SUPERFAMILY SSF51713 1 364 7.32E-159 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tlie_0636 20812200e58e1cfa4338d0816f75bce0 373 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 2 365 56.124 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tlie_0636 20812200e58e1cfa4338d0816f75bce0 373 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 4 367 6.0E-158 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tlie_0636 20812200e58e1cfa4338d0816f75bce0 373 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 4 365 5.3E-153 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tlie_1453 d618ac1c10a9a1508a8961b47e7705cd 311 Gene3D G3DSA:3.40.630.50 45 201 4.1E-6 T 14-10-2018 Tlie_1453 d618ac1c10a9a1508a8961b47e7705cd 311 Pfam PF04414 D-aminoacyl-tRNA deacylase 81 293 1.5E-29 T 14-10-2018 IPR007508 D-aminoacyl-tRNA deacylase DtdA GO:0016788|GO:0051499 Tlie_1453 d618ac1c10a9a1508a8961b47e7705cd 311 SUPERFAMILY SSF142535 43 304 6.93E-37 T 14-10-2018 Tlie_0648 9fc1f48112d5216a73a890154765cdb7 98 ProSitePatterns PS00050 Ribosomal protein L23 signature. 78 93 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0648 9fc1f48112d5216a73a890154765cdb7 98 Gene3D G3DSA:3.30.70.330 3 97 8.8E-38 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Tlie_0648 9fc1f48112d5216a73a890154765cdb7 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 6 95 23.455 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Tlie_0648 9fc1f48112d5216a73a890154765cdb7 98 SUPERFAMILY SSF54189 5 95 4.32E-33 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0648 9fc1f48112d5216a73a890154765cdb7 98 Pfam PF00276 Ribosomal protein L23 7 92 1.4E-34 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Tlie_1039 bceb3e24051437e67be3ba9e1b7a9a60 135 SUPERFAMILY SSF55021 54 132 1.83E-25 T 14-10-2018 Tlie_1039 bceb3e24051437e67be3ba9e1b7a9a60 135 Gene3D G3DSA:1.10.1220.10 11 51 7.1E-15 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Tlie_1039 bceb3e24051437e67be3ba9e1b7a9a60 135 Gene3D G3DSA:3.30.70.1150 52 134 2.1E-30 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Tlie_1039 bceb3e24051437e67be3ba9e1b7a9a60 135 Pfam PF08753 NikR C terminal nickel binding domain 56 130 8.8E-30 T 14-10-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal Tlie_1039 bceb3e24051437e67be3ba9e1b7a9a60 135 SUPERFAMILY SSF47598 4 49 1.91E-11 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Tlie_1039 bceb3e24051437e67be3ba9e1b7a9a60 135 Hamap MF_00476 Nickel-responsive regulator [nikR]. 4 134 27.223 T 14-10-2018 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 Tlie_1039 bceb3e24051437e67be3ba9e1b7a9a60 135 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 43 3.9E-9 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Tlie_0658 ac9471e2bfd7b09e627e37b246be53be 180 Gene3D G3DSA:3.30.1440.10 2 180 1.3E-80 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0658 ac9471e2bfd7b09e627e37b246be53be 180 SUPERFAMILY SSF55282 4 179 1.34E-75 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0658 ac9471e2bfd7b09e627e37b246be53be 180 Pfam PF00281 Ribosomal protein L5 25 81 7.4E-26 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0658 ac9471e2bfd7b09e627e37b246be53be 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 4.7E-41 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0658 ac9471e2bfd7b09e627e37b246be53be 180 PIRSF PIRSF002161 1 180 3.0E-67 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0658 ac9471e2bfd7b09e627e37b246be53be 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 44.461 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0565 6fa17ee843fcf1c8b5b8c05fa4a85bcd 342 Pfam PF00534 Glycosyl transferases group 1 170 307 5.0E-31 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tlie_0565 6fa17ee843fcf1c8b5b8c05fa4a85bcd 342 Pfam PF13439 Glycosyltransferase Family 4 13 155 8.7E-24 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tlie_0565 6fa17ee843fcf1c8b5b8c05fa4a85bcd 342 Gene3D G3DSA:3.40.50.2000 1 163 9.5E-30 T 14-10-2018 Tlie_0565 6fa17ee843fcf1c8b5b8c05fa4a85bcd 342 Gene3D G3DSA:3.40.50.2000 164 310 8.1E-37 T 14-10-2018 Tlie_0565 6fa17ee843fcf1c8b5b8c05fa4a85bcd 342 SUPERFAMILY SSF53756 3 339 1.35E-72 T 14-10-2018 Tlie_0930 37f9337d74c29262ccccfdb331a16bc4 218 Gene3D G3DSA:3.40.50.150 1 216 1.7E-74 T 14-10-2018 Tlie_0930 37f9337d74c29262ccccfdb331a16bc4 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 13 211 2.8E-55 T 14-10-2018 Tlie_0930 37f9337d74c29262ccccfdb331a16bc4 218 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 3 216 34.662 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Tlie_0930 37f9337d74c29262ccccfdb331a16bc4 218 SUPERFAMILY SSF53335 7 215 1.37E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_0930 37f9337d74c29262ccccfdb331a16bc4 218 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 12 215 1.6E-61 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Tlie_0851 f5841b1fb16bd14ca8de672ac133182f 409 Pfam PF00994 Probable molybdopterin binding domain 7 171 2.7E-27 T 14-10-2018 IPR001453 MoaB/Mog domain Tlie_0851 f5841b1fb16bd14ca8de672ac133182f 409 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 409 111.314 T 14-10-2018 IPR008135 Competence-induced protein CinA Tlie_0851 f5841b1fb16bd14ca8de672ac133182f 409 SMART SM00852 5 172 4.6E-31 T 14-10-2018 IPR001453 MoaB/Mog domain Tlie_0851 f5841b1fb16bd14ca8de672ac133182f 409 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 3 400 4.1E-79 T 14-10-2018 IPR008135 Competence-induced protein CinA Tlie_0851 f5841b1fb16bd14ca8de672ac133182f 409 PIRSF PIRSF006728 1 405 3.2E-105 T 14-10-2018 IPR008135 Competence-induced protein CinA Tlie_0851 f5841b1fb16bd14ca8de672ac133182f 409 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 258 398 5.6E-49 T 14-10-2018 IPR008136 CinA, C-terminal Tlie_0851 f5841b1fb16bd14ca8de672ac133182f 409 Gene3D G3DSA:3.40.980.10 1 168 1.4E-44 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tlie_0851 f5841b1fb16bd14ca8de672ac133182f 409 SUPERFAMILY SSF142433 243 400 1.26E-53 T 14-10-2018 IPR036653 CinA-like, C-terminal Tlie_0851 f5841b1fb16bd14ca8de672ac133182f 409 Pfam PF02464 Competence-damaged protein 248 399 1.5E-57 T 14-10-2018 IPR008136 CinA, C-terminal Tlie_0851 f5841b1fb16bd14ca8de672ac133182f 409 Gene3D G3DSA:3.90.950.20 231 401 1.9E-59 T 14-10-2018 IPR036653 CinA-like, C-terminal Tlie_0851 f5841b1fb16bd14ca8de672ac133182f 409 SUPERFAMILY SSF53218 4 202 5.76E-35 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tlie_0395 ed3e2fbf25647664c2bb02116d263030 243 Pfam PF01066 CDP-alcohol phosphatidyltransferase 14 77 2.4E-14 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tlie_0395 ed3e2fbf25647664c2bb02116d263030 243 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 55 77 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tlie_0395 ed3e2fbf25647664c2bb02116d263030 243 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 20 174 8.6E-43 T 14-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 Tlie_0395 ed3e2fbf25647664c2bb02116d263030 243 Gene3D G3DSA:1.20.120.1760 8 173 7.2E-18 T 14-10-2018 Tlie_0692 0b3673e2663e8f290baa3d8a96ed788f 257 Pfam PF00005 ABC transporter 22 181 1.9E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0692 0b3673e2663e8f290baa3d8a96ed788f 257 Gene3D G3DSA:3.40.50.300 1 255 3.5E-62 T 14-10-2018 Tlie_0692 0b3673e2663e8f290baa3d8a96ed788f 257 SMART SM00382 30 230 9.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0692 0b3673e2663e8f290baa3d8a96ed788f 257 SUPERFAMILY SSF52540 4 254 1.74E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0692 0b3673e2663e8f290baa3d8a96ed788f 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 232 253 3.1E-10 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Tlie_0776 bbba9a280ed6f922078b1c751f168508 679 Gene3D G3DSA:1.10.3210.10 441 641 1.1E-21 T 14-10-2018 Tlie_0776 bbba9a280ed6f922078b1c751f168508 679 Pfam PF07697 7TM-HD extracellular 50 231 4.7E-14 T 14-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain Tlie_0776 bbba9a280ed6f922078b1c751f168508 679 Pfam PF01966 HD domain 454 595 4.8E-19 T 14-10-2018 IPR006674 HD domain Tlie_0776 bbba9a280ed6f922078b1c751f168508 679 TIGRFAM TIGR00277 HDIG: HDIG domain 451 549 6.2E-25 T 14-10-2018 IPR006675 HDIG domain Tlie_0776 bbba9a280ed6f922078b1c751f168508 679 SMART SM00471 450 605 9.7E-10 T 14-10-2018 IPR003607 HD/PDEase domain Tlie_0776 bbba9a280ed6f922078b1c751f168508 679 SUPERFAMILY SSF109604 452 599 6.02E-17 T 14-10-2018 Tlie_0147 4110e04aef63e9e2943400f6630964a6 246 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 2 239 5.9E-42 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Tlie_0147 4110e04aef63e9e2943400f6630964a6 246 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 246 43.032 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Tlie_0147 4110e04aef63e9e2943400f6630964a6 246 Pfam PF02654 Cobalamin-5-phosphate synthase 7 238 2.4E-55 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Tlie_1179 1fc75bb58f4eea317bcfb3d5fa40f34f 396 Gene3D G3DSA:3.40.640.10 62 283 4.8E-128 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1179 1fc75bb58f4eea317bcfb3d5fa40f34f 396 SUPERFAMILY SSF53383 1 394 9.82E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1179 1fc75bb58f4eea317bcfb3d5fa40f34f 396 Gene3D G3DSA:3.90.1150.10 25 388 4.8E-128 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1179 1fc75bb58f4eea317bcfb3d5fa40f34f 396 Pfam PF00155 Aminotransferase class I and II 31 388 2.5E-63 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tlie_1179 1fc75bb58f4eea317bcfb3d5fa40f34f 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 233 246 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Tlie_0669 7a9ed900d8da9c763bc86cd77b11d3ea 107 SUPERFAMILY SSF50104 9 68 1.38E-11 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tlie_0669 7a9ed900d8da9c763bc86cd77b11d3ea 107 Gene3D G3DSA:2.30.30.30 8 87 4.9E-5 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Tlie_0168 af060b155012c9c114798d0eaff25439 377 Gene3D G3DSA:3.40.50.1820 29 366 6.9E-135 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Tlie_0168 af060b155012c9c114798d0eaff25439 377 Pfam PF00561 alpha/beta hydrolase fold 52 359 2.8E-38 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Tlie_0168 af060b155012c9c114798d0eaff25439 377 SUPERFAMILY SSF53474 28 370 3.34E-91 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Tlie_0168 af060b155012c9c114798d0eaff25439 377 Gene3D G3DSA:1.10.1740.110 187 290 6.9E-135 T 14-10-2018 Tlie_0168 af060b155012c9c114798d0eaff25439 377 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 9 372 30.711 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Tlie_0168 af060b155012c9c114798d0eaff25439 377 PIRSF PIRSF000443 10 377 3.4E-132 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Tlie_0168 af060b155012c9c114798d0eaff25439 377 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 24 371 3.5E-130 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Tlie_0031 206826b5e663890e416026d443a42c78 327 PIRSF PIRSF006470 1 327 2.0E-116 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Tlie_0031 206826b5e663890e416026d443a42c78 327 Gene3D G3DSA:3.40.190.170 26 325 5.5E-116 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Tlie_0031 206826b5e663890e416026d443a42c78 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 30 309 1.5E-96 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Tlie_0031 206826b5e663890e416026d443a42c78 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 30 286 5.2E-81 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Tlie_0301 b7121e66f196ab231660a694dd32b9ac 206 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 172 200 6.0E-7 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Tlie_0301 b7121e66f196ab231660a694dd32b9ac 206 Gene3D G3DSA:3.30.1330.130 4 156 1.3E-39 T 14-10-2018 Tlie_0301 b7121e66f196ab231660a694dd32b9ac 206 Gene3D G3DSA:3.30.60.20 168 198 2.6E-6 T 14-10-2018 Tlie_0301 b7121e66f196ab231660a694dd32b9ac 206 Pfam PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon 17 151 3.4E-37 T 14-10-2018 IPR003814 Formylmethanofuran dehydrogenase, subunit E domain Tlie_0301 b7121e66f196ab231660a694dd32b9ac 206 PIRSF PIRSF006578 3 203 4.2E-61 T 14-10-2018 IPR026328 Formylmethanofuran dehydrogenase, subunit E Tlie_0301 b7121e66f196ab231660a694dd32b9ac 206 SUPERFAMILY SSF143555 8 165 2.75E-42 T 14-10-2018 Tlie_1706 7391accea2e1dd52e03e8ad7195877cd 274 SUPERFAMILY SSF56752 3 268 9.29E-65 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Tlie_1706 7391accea2e1dd52e03e8ad7195877cd 274 Gene3D G3DSA:3.20.10.10 116 272 1.3E-40 T 14-10-2018 Tlie_1706 7391accea2e1dd52e03e8ad7195877cd 274 Pfam PF01063 Amino-transferase class IV 30 243 7.5E-48 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Tlie_1706 7391accea2e1dd52e03e8ad7195877cd 274 Gene3D G3DSA:3.30.470.10 1 101 1.2E-28 T 14-10-2018 Tlie_0212 ae7a133c30e8d1b9202711bc520b3395 371 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 151 179 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Tlie_0212 ae7a133c30e8d1b9202711bc520b3395 371 Gene3D G3DSA:3.40.50.1970 3 160 1.4E-44 T 14-10-2018 Tlie_0212 ae7a133c30e8d1b9202711bc520b3395 371 PIRSF PIRSF000112 1 361 4.0E-101 T 14-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 Tlie_0212 ae7a133c30e8d1b9202711bc520b3395 371 Gene3D G3DSA:1.20.1090.10 161 370 8.8E-82 T 14-10-2018 Tlie_0212 ae7a133c30e8d1b9202711bc520b3395 371 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 347 9.9E-69 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Tlie_0212 ae7a133c30e8d1b9202711bc520b3395 371 SUPERFAMILY SSF56796 4 357 4.45E-92 T 14-10-2018 Tlie_0824 25e7fae2854683fbac0e456bde5e0c0e 491 Gene3D G3DSA:3.40.50.12780 2 394 3.8E-88 T 14-10-2018 Tlie_0824 25e7fae2854683fbac0e456bde5e0c0e 491 Pfam PF00501 AMP-binding enzyme 13 398 1.4E-82 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Tlie_0824 25e7fae2854683fbac0e456bde5e0c0e 491 ProSitePatterns PS00455 Putative AMP-binding domain signature. 150 161 - T 14-10-2018 IPR020845 AMP-binding, conserved site Tlie_0824 25e7fae2854683fbac0e456bde5e0c0e 491 Pfam PF13193 AMP-binding enzyme C-terminal domain 407 482 1.5E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Tlie_0824 25e7fae2854683fbac0e456bde5e0c0e 491 SUPERFAMILY SSF56801 5 490 5.49E-128 T 14-10-2018 Tlie_0824 25e7fae2854683fbac0e456bde5e0c0e 491 Gene3D G3DSA:3.30.300.310 395 491 2.6E-33 T 14-10-2018 Tlie_0787 8a04a96d07d28806d349f410f6b0fada 781 Pfam PF00905 Penicillin binding protein transpeptidase domain 337 610 1.2E-37 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Tlie_0787 8a04a96d07d28806d349f410f6b0fada 781 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 88 618 1.2E-182 T 14-10-2018 Tlie_0787 8a04a96d07d28806d349f410f6b0fada 781 SUPERFAMILY SSF56601 234 671 6.01E-125 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tlie_0787 8a04a96d07d28806d349f410f6b0fada 781 SUPERFAMILY SSF53955 65 274 7.03E-79 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Tlie_0787 8a04a96d07d28806d349f410f6b0fada 781 Gene3D G3DSA:3.40.710.10 276 669 3.6E-121 T 14-10-2018 Tlie_0787 8a04a96d07d28806d349f410f6b0fada 781 Pfam PF00912 Transglycosylase 79 252 1.0E-68 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tlie_0787 8a04a96d07d28806d349f410f6b0fada 781 Gene3D G3DSA:1.10.3810.10 71 268 6.4E-83 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tlie_1859 1240364b38ba0b81ae7801999517a5f1 398 ProSitePatterns PS00331 Malic enzymes signature. 160 176 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 Tlie_1859 1240364b38ba0b81ae7801999517a5f1 398 SMART SM00919 164 388 6.2E-136 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Tlie_1859 1240364b38ba0b81ae7801999517a5f1 398 Pfam PF03949 Malic enzyme, NAD binding domain 166 387 4.1E-30 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Tlie_1859 1240364b38ba0b81ae7801999517a5f1 398 Pfam PF00390 Malic enzyme, N-terminal domain 22 152 3.0E-29 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Tlie_1859 1240364b38ba0b81ae7801999517a5f1 398 SUPERFAMILY SSF51735 164 397 2.52E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1859 1240364b38ba0b81ae7801999517a5f1 398 Gene3D G3DSA:3.40.50.10380 2 161 1.7E-76 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Tlie_1859 1240364b38ba0b81ae7801999517a5f1 398 SUPERFAMILY SSF53223 12 162 1.22E-56 T 14-10-2018 Tlie_1859 1240364b38ba0b81ae7801999517a5f1 398 SMART SM01274 19 152 1.6E-82 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Tlie_1859 1240364b38ba0b81ae7801999517a5f1 398 Gene3D G3DSA:3.40.50.720 162 398 4.7E-91 T 14-10-2018 Tlie_1859 1240364b38ba0b81ae7801999517a5f1 398 PIRSF PIRSF000106 16 397 3.5E-91 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Tlie_0078 073ae82e2ab145fff7d8d66349a29dfe 147 Pfam PF02050 Flagellar FliJ protein 25 143 1.4E-8 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Tlie_0078 073ae82e2ab145fff7d8d66349a29dfe 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 8 143 4.6E-15 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Tlie_1201 2f0a5c675c80a9ebea1ffced5bdf0e94 412 SUPERFAMILY SSF56762 21 379 7.59E-102 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1201 2f0a5c675c80a9ebea1ffced5bdf0e94 412 Pfam PF00374 Nickel-dependent hydrogenase 47 115 2.9E-18 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Tlie_1201 2f0a5c675c80a9ebea1ffced5bdf0e94 412 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 124 379 1.0E-54 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1201 2f0a5c675c80a9ebea1ffced5bdf0e94 412 Gene3D G3DSA:1.10.645.20 10 379 1.5E-114 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1201 2f0a5c675c80a9ebea1ffced5bdf0e94 412 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 47 72 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Tlie_1685 d53d7d3f494a3cfdf46a4e8a9a004414 113 Gene3D G3DSA:1.10.3210.10 1 110 1.4E-42 T 14-10-2018 Tlie_1685 d53d7d3f494a3cfdf46a4e8a9a004414 113 Pfam PF13487 HD domain 2 57 6.7E-17 T 14-10-2018 Tlie_1685 d53d7d3f494a3cfdf46a4e8a9a004414 113 SUPERFAMILY SSF109604 2 107 2.92E-22 T 14-10-2018 Tlie_1102 338fa7ff03ec695cc579794adcc2b0b8 315 Pfam PF00698 Acyl transferase domain 6 297 3.0E-46 T 14-10-2018 IPR014043 Acyl transferase Tlie_1102 338fa7ff03ec695cc579794adcc2b0b8 315 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 303 1.1E-48 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Tlie_1102 338fa7ff03ec695cc579794adcc2b0b8 315 PIRSF PIRSF000446 1 312 8.0E-108 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Tlie_1102 338fa7ff03ec695cc579794adcc2b0b8 315 Gene3D G3DSA:3.30.70.250 128 200 7.2E-99 T 14-10-2018 Tlie_1102 338fa7ff03ec695cc579794adcc2b0b8 315 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 2 290 4.6E-106 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Tlie_1102 338fa7ff03ec695cc579794adcc2b0b8 315 SUPERFAMILY SSF52151 4 311 7.06E-76 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Tlie_1102 338fa7ff03ec695cc579794adcc2b0b8 315 SUPERFAMILY SSF55048 129 198 4.05E-19 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Tlie_1102 338fa7ff03ec695cc579794adcc2b0b8 315 Gene3D G3DSA:3.40.366.10 6 287 7.2E-99 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Tlie_0999 2cc20c6b1f7e3213dd0475e9ba943e01 117 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 10 105 1.9E-28 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Tlie_0999 2cc20c6b1f7e3213dd0475e9ba943e01 117 Pfam PF02410 Ribosomal silencing factor during starvation 11 105 3.5E-24 T 14-10-2018 Tlie_0999 2cc20c6b1f7e3213dd0475e9ba943e01 117 Gene3D G3DSA:3.30.460.10 4 114 2.6E-29 T 14-10-2018 Tlie_0999 2cc20c6b1f7e3213dd0475e9ba943e01 117 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 4 106 21.742 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Tlie_0999 2cc20c6b1f7e3213dd0475e9ba943e01 117 SUPERFAMILY SSF81301 9 114 2.45E-30 T 14-10-2018 Tlie_0356 8aa3b515c2244b7db304f9ba440d8f5d 173 SUPERFAMILY SSF55469 8 172 2.49E-45 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tlie_0356 8aa3b515c2244b7db304f9ba440d8f5d 173 Gene3D G3DSA:3.40.109.10 1 173 1.2E-49 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tlie_0356 8aa3b515c2244b7db304f9ba440d8f5d 173 Pfam PF00881 Nitroreductase family 70 151 6.0E-9 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tlie_0356 8aa3b515c2244b7db304f9ba440d8f5d 173 Pfam PF00881 Nitroreductase family 11 63 1.0E-14 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tlie_1655 8189d813cecb907d57493db62053de0b 316 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 240 1.2E-23 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Tlie_1655 8189d813cecb907d57493db62053de0b 316 SUPERFAMILY SSF51735 1 313 1.21E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1655 8189d813cecb907d57493db62053de0b 316 Gene3D G3DSA:3.40.50.720 1 314 3.0E-108 T 14-10-2018 Tlie_1719 5726a1b2673d0f27d121fa85e3e8279a 455 PIRSF PIRSF006603 1 454 2.4E-100 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tlie_1719 5726a1b2673d0f27d121fa85e3e8279a 455 Pfam PF01554 MatE 23 184 1.9E-29 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tlie_1719 5726a1b2673d0f27d121fa85e3e8279a 455 Pfam PF01554 MatE 245 401 2.4E-22 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tlie_1719 5726a1b2673d0f27d121fa85e3e8279a 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 418 3.5E-67 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tlie_0590 137515e94b5b45143896f9dbec068d77 315 Gene3D G3DSA:3.30.70.890 164 270 4.7E-84 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Tlie_0590 137515e94b5b45143896f9dbec068d77 315 TIGRFAM TIGR00191 thrB: homoserine kinase 6 306 2.3E-75 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Tlie_0590 137515e94b5b45143896f9dbec068d77 315 Hamap MF_00384 Homoserine kinase [thrB]. 8 305 28.473 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Tlie_0590 137515e94b5b45143896f9dbec068d77 315 Gene3D G3DSA:3.30.230.10 8 163 4.7E-84 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tlie_0590 137515e94b5b45143896f9dbec068d77 315 SUPERFAMILY SSF55060 167 286 2.88E-28 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Tlie_0590 137515e94b5b45143896f9dbec068d77 315 PRINTS PR00958 Homoserine kinase signature 13 28 1.6E-35 T 14-10-2018 Tlie_0590 137515e94b5b45143896f9dbec068d77 315 PRINTS PR00958 Homoserine kinase signature 252 267 1.6E-35 T 14-10-2018 Tlie_0590 137515e94b5b45143896f9dbec068d77 315 PRINTS PR00958 Homoserine kinase signature 172 189 1.6E-35 T 14-10-2018 Tlie_0590 137515e94b5b45143896f9dbec068d77 315 PRINTS PR00958 Homoserine kinase signature 98 113 1.6E-35 T 14-10-2018 Tlie_0590 137515e94b5b45143896f9dbec068d77 315 PRINTS PR00958 Homoserine kinase signature 132 145 1.6E-35 T 14-10-2018 Tlie_0590 137515e94b5b45143896f9dbec068d77 315 Pfam PF08544 GHMP kinases C terminal 225 283 4.4E-6 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain Tlie_0590 137515e94b5b45143896f9dbec068d77 315 PIRSF PIRSF000676 2 307 1.0E-83 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Tlie_0590 137515e94b5b45143896f9dbec068d77 315 Pfam PF00288 GHMP kinases N terminal domain 85 145 1.5E-6 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Tlie_0590 137515e94b5b45143896f9dbec068d77 315 SUPERFAMILY SSF54211 5 160 9.11E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_1219 31e82eac5968549bdee2f55e92882bcc 356 Gene3D G3DSA:1.20.58.340 279 356 7.9E-37 T 14-10-2018 Tlie_1219 31e82eac5968549bdee2f55e92882bcc 356 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 37 356 2.1E-103 T 14-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 Tlie_1219 31e82eac5968549bdee2f55e92882bcc 356 Gene3D G3DSA:1.20.58.340 167 278 2.0E-38 T 14-10-2018 Tlie_1219 31e82eac5968549bdee2f55e92882bcc 356 SUPERFAMILY SSF144083 291 354 7.59E-25 T 14-10-2018 Tlie_1219 31e82eac5968549bdee2f55e92882bcc 356 Gene3D G3DSA:3.30.460.20 2 166 1.6E-47 T 14-10-2018 Tlie_1219 31e82eac5968549bdee2f55e92882bcc 356 Pfam PF01544 CorA-like Mg2+ transporter protein 62 352 1.3E-76 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Tlie_1219 31e82eac5968549bdee2f55e92882bcc 356 SUPERFAMILY SSF143865 12 290 1.57E-78 T 14-10-2018 Tlie_0327 ecf723cb5fec47e0f1e83702b182caae 389 Gene3D G3DSA:2.40.50.580 16 89 3.8E-16 T 14-10-2018 Tlie_0327 ecf723cb5fec47e0f1e83702b182caae 389 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 19 234 8.7E-41 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein Tlie_0327 ecf723cb5fec47e0f1e83702b182caae 389 Gene3D G3DSA:3.40.1350.60 91 238 1.5E-34 T 14-10-2018 Tlie_0327 ecf723cb5fec47e0f1e83702b182caae 389 Pfam PF03749 Sugar fermentation stimulation protein 25 229 1.7E-45 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein Tlie_1381 3b5c714ef2176531e5edca66dece4442 574 SUPERFAMILY SSF56281 22 438 7.53E-93 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_1381 3b5c714ef2176531e5edca66dece4442 574 Gene3D G3DSA:3.60.15.10 24 454 1.9E-175 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_1381 3b5c714ef2176531e5edca66dece4442 574 PIRSF PIRSF004803 11 572 1.4E-207 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 Tlie_1381 3b5c714ef2176531e5edca66dece4442 574 Gene3D G3DSA:3.40.50.10710 220 371 1.9E-175 T 14-10-2018 Tlie_1381 3b5c714ef2176531e5edca66dece4442 574 Hamap MF_01491 Ribonuclease J [rnj]. 15 572 40.231 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 Tlie_1381 3b5c714ef2176531e5edca66dece4442 574 Gene3D G3DSA:3.10.20.580 464 572 1.6E-11 T 14-10-2018 Tlie_1381 3b5c714ef2176531e5edca66dece4442 574 Pfam PF12706 Beta-lactamase superfamily domain 74 179 2.5E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tlie_1381 3b5c714ef2176531e5edca66dece4442 574 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 375 422 1.4E-13 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Tlie_1381 3b5c714ef2176531e5edca66dece4442 574 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 22 569 1.1E-166 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 Tlie_1381 3b5c714ef2176531e5edca66dece4442 574 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 378 406 - T 14-10-2018 IPR001587 Ribonuclease J, conserved site Tlie_1381 3b5c714ef2176531e5edca66dece4442 574 SMART SM00849 32 228 1.3E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tlie_1406 e58252629ef0abf2ac4407ad0b454a7c 701 Pfam PF13380 CoA binding domain 16 137 4.2E-23 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Tlie_1406 e58252629ef0abf2ac4407ad0b454a7c 701 SUPERFAMILY SSF52210 303 460 1.7E-27 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tlie_1406 e58252629ef0abf2ac4407ad0b454a7c 701 SMART SM00881 11 106 1.7E-30 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Tlie_1406 e58252629ef0abf2ac4407ad0b454a7c 701 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 159 297 1.5E-43 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Tlie_1406 e58252629ef0abf2ac4407ad0b454a7c 701 Gene3D G3DSA:3.40.50.720 6 133 2.2E-40 T 14-10-2018 Tlie_1406 e58252629ef0abf2ac4407ad0b454a7c 701 Gene3D G3DSA:3.40.50.261 302 467 1.1E-39 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tlie_1406 e58252629ef0abf2ac4407ad0b454a7c 701 Gene3D G3DSA:3.40.50.261 138 299 9.2E-47 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tlie_1406 e58252629ef0abf2ac4407ad0b454a7c 701 Gene3D G3DSA:3.30.470.20 484 695 1.8E-76 T 14-10-2018 Tlie_1406 e58252629ef0abf2ac4407ad0b454a7c 701 Gene3D G3DSA:3.30.1490.20 502 579 1.8E-76 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tlie_1406 e58252629ef0abf2ac4407ad0b454a7c 701 SUPERFAMILY SSF56059 484 696 7.78E-41 T 14-10-2018 Tlie_1406 e58252629ef0abf2ac4407ad0b454a7c 701 SUPERFAMILY SSF51735 5 140 1.13E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1406 e58252629ef0abf2ac4407ad0b454a7c 701 Pfam PF13549 ATP-grasp domain 482 695 6.2E-69 T 14-10-2018 Tlie_1406 e58252629ef0abf2ac4407ad0b454a7c 701 SUPERFAMILY SSF52210 136 294 3.27E-34 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tlie_0023 adbf2a451fc45412fbb411b92b2c1561 226 SUPERFAMILY SSF48008 75 210 1.62E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0023 adbf2a451fc45412fbb411b92b2c1561 226 Gene3D G3DSA:1.10.10.10 4 70 2.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0023 adbf2a451fc45412fbb411b92b2c1561 226 Gene3D G3DSA:1.20.120.530 73 214 6.7E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0023 adbf2a451fc45412fbb411b92b2c1561 226 SMART SM00895 79 206 8.4E-21 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_0023 adbf2a451fc45412fbb411b92b2c1561 226 SMART SM00345 11 69 5.3E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0023 adbf2a451fc45412fbb411b92b2c1561 226 Pfam PF07729 FCD domain 82 205 8.8E-23 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_0023 adbf2a451fc45412fbb411b92b2c1561 226 SUPERFAMILY SSF46785 7 73 1.95E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_0023 adbf2a451fc45412fbb411b92b2c1561 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 4.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1156 666da5dd4d6c3c0af7fda7c25e83e260 327 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 310 1.6E-61 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tlie_1156 666da5dd4d6c3c0af7fda7c25e83e260 327 Gene3D G3DSA:3.40.50.1100 55 154 8.2E-100 T 14-10-2018 Tlie_1156 666da5dd4d6c3c0af7fda7c25e83e260 327 SUPERFAMILY SSF53686 8 315 7.6E-77 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tlie_1156 666da5dd4d6c3c0af7fda7c25e83e260 327 Gene3D G3DSA:3.40.50.1100 14 314 8.2E-100 T 14-10-2018 Tlie_0263 68cc67ca70a65fb89f5967e17c275d04 302 TIGRFAM TIGR01595 cas_CT1132: CRISPR-associated protein, CT1132 family 4 282 2.9E-62 T 14-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C Tlie_0263 68cc67ca70a65fb89f5967e17c275d04 302 Pfam PF05107 CRISPR-associated protein Cas7 5 233 6.8E-49 T 14-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C Tlie_0263 68cc67ca70a65fb89f5967e17c275d04 302 TIGRFAM TIGR02590 cas_Csh2: CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI 6 282 3.0E-74 T 14-10-2018 IPR013419 CRISPR-associated protein Csh2 Tlie_1736 071dde2c455d40927ef7ffa188c7aefe 400 SUPERFAMILY SSF53187 6 393 6.57E-44 T 14-10-2018 Tlie_1736 071dde2c455d40927ef7ffa188c7aefe 400 SUPERFAMILY SSF55031 175 277 7.78E-15 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tlie_1736 071dde2c455d40927ef7ffa188c7aefe 400 Pfam PF01546 Peptidase family M20/M25/M40 68 391 5.4E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tlie_1736 071dde2c455d40927ef7ffa188c7aefe 400 Gene3D G3DSA:3.40.630.10 14 379 1.2E-66 T 14-10-2018 Tlie_1736 071dde2c455d40927ef7ffa188c7aefe 400 Gene3D G3DSA:3.30.70.360 175 309 1.2E-66 T 14-10-2018 Tlie_1736 071dde2c455d40927ef7ffa188c7aefe 400 Pfam PF07687 Peptidase dimerisation domain 172 278 1.7E-15 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Tlie_0165 ccc423d0705a1e650f72be5ceb630f42 690 SMART SM00283 400 689 4.4E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tlie_0165 ccc423d0705a1e650f72be5ceb630f42 690 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 541 570 1.3E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tlie_0165 ccc423d0705a1e650f72be5ceb630f42 690 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 428 457 1.3E-6 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tlie_0165 ccc423d0705a1e650f72be5ceb630f42 690 Gene3D G3DSA:3.30.450.20 167 293 3.3E-26 T 14-10-2018 Tlie_0165 ccc423d0705a1e650f72be5ceb630f42 690 Gene3D G3DSA:1.20.1480.50 294 385 1.3E-6 T 14-10-2018 Tlie_0165 ccc423d0705a1e650f72be5ceb630f42 690 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 487 642 3.2E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tlie_0165 ccc423d0705a1e650f72be5ceb630f42 690 SUPERFAMILY SSF103190 123 203 1.28E-12 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Tlie_0165 ccc423d0705a1e650f72be5ceb630f42 690 Pfam PF02743 Cache domain 45 282 1.1E-31 T 14-10-2018 IPR033479 Double Cache domain 1 Tlie_0165 ccc423d0705a1e650f72be5ceb630f42 690 SUPERFAMILY SSF58104 362 689 2.22E-66 T 14-10-2018 Tlie_0165 ccc423d0705a1e650f72be5ceb630f42 690 Gene3D G3DSA:1.10.287.950 386 689 8.7E-71 T 14-10-2018 Tlie_1291 73a2ecb5f1ac28edd5f47235c04ae40c 105 PIRSF PIRSF000077 1 105 8.7E-28 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Tlie_1291 73a2ecb5f1ac28edd5f47235c04ae40c 105 Pfam PF00085 Thioredoxin 2 103 2.1E-24 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 Tlie_1291 73a2ecb5f1ac28edd5f47235c04ae40c 105 Gene3D G3DSA:3.40.30.10 1 105 1.9E-30 T 14-10-2018 Tlie_1291 73a2ecb5f1ac28edd5f47235c04ae40c 105 SUPERFAMILY SSF52833 2 105 4.09E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tlie_0696 dcfa1ea83e2755ad82e392baf0c268c6 324 Gene3D G3DSA:3.40.50.1000 32 284 3.5E-45 T 14-10-2018 IPR023214 HAD superfamily Tlie_0696 dcfa1ea83e2755ad82e392baf0c268c6 324 Pfam PF08282 haloacid dehalogenase-like hydrolase 34 283 1.2E-39 T 14-10-2018 Tlie_0696 dcfa1ea83e2755ad82e392baf0c268c6 324 Gene3D G3DSA:3.30.1240.10 111 214 3.5E-45 T 14-10-2018 Tlie_0696 dcfa1ea83e2755ad82e392baf0c268c6 324 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 33 258 6.8E-20 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Tlie_0696 dcfa1ea83e2755ad82e392baf0c268c6 324 SUPERFAMILY SSF56784 32 286 1.41E-45 T 14-10-2018 IPR036412 HAD-like superfamily Tlie_1397 b5e81bf4a21d0e42688e6f7e13debdd2 215 SMART SM01007 8 184 1.6E-62 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Tlie_1397 b5e81bf4a21d0e42688e6f7e13debdd2 215 Gene3D G3DSA:3.40.225.10 1 214 4.8E-75 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Tlie_1397 b5e81bf4a21d0e42688e6f7e13debdd2 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 184 8.0E-51 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Tlie_1397 b5e81bf4a21d0e42688e6f7e13debdd2 215 SUPERFAMILY SSF53639 1 210 5.1E-68 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Tlie_0300 72618be03c2142ef0140f88280228f6c 157 PIRSF PIRSF006181 1 157 1.6E-62 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Tlie_0300 72618be03c2142ef0140f88280228f6c 157 Gene3D G3DSA:3.90.960.10 1 156 1.7E-56 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Tlie_0300 72618be03c2142ef0140f88280228f6c 157 Pfam PF04073 Aminoacyl-tRNA editing domain 29 144 1.7E-30 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Tlie_0300 72618be03c2142ef0140f88280228f6c 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 4 154 3.6E-58 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Tlie_0300 72618be03c2142ef0140f88280228f6c 157 SUPERFAMILY SSF55826 4 154 1.23E-45 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Tlie_0400 10486e61870ef97d0333249856cbe145 386 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 218 369 1.3E-24 T 14-10-2018 IPR006512 YidE/YbjL duplication Tlie_0400 10486e61870ef97d0333249856cbe145 386 Pfam PF06826 Predicted Permease Membrane Region 213 382 7.7E-36 T 14-10-2018 IPR006512 YidE/YbjL duplication Tlie_0400 10486e61870ef97d0333249856cbe145 386 Pfam PF06826 Predicted Permease Membrane Region 16 170 6.2E-22 T 14-10-2018 IPR006512 YidE/YbjL duplication Tlie_0498 62c63dd5d41af66772b6abc4d337a344 324 SUPERFAMILY SSF51735 18 168 3.29E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0498 62c63dd5d41af66772b6abc4d337a344 324 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 18 316 1.1E-80 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 Tlie_0498 62c63dd5d41af66772b6abc4d337a344 324 Gene3D G3DSA:3.40.50.720 16 189 2.2E-44 T 14-10-2018 Tlie_0498 62c63dd5d41af66772b6abc4d337a344 324 Pfam PF02558 Ketopantoate reductase PanE/ApbA 18 167 6.7E-34 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain Tlie_0498 62c63dd5d41af66772b6abc4d337a344 324 Gene3D G3DSA:1.10.1040.10 191 322 2.2E-36 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Tlie_0498 62c63dd5d41af66772b6abc4d337a344 324 SUPERFAMILY SSF48179 193 315 1.94E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tlie_0498 62c63dd5d41af66772b6abc4d337a344 324 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 193 314 3.9E-35 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain Tlie_0618 ef79253d9c6b859067549d420fc587eb 151 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 5.4E-58 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Tlie_0618 ef79253d9c6b859067549d420fc587eb 151 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 145 2.4E-57 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Tlie_0618 ef79253d9c6b859067549d420fc587eb 151 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 36.317 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Tlie_0618 ef79253d9c6b859067549d420fc587eb 151 Gene3D G3DSA:3.50.80.10 1 148 1.2E-58 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Tlie_0618 ef79253d9c6b859067549d420fc587eb 151 SUPERFAMILY SSF69500 1 144 1.27E-57 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Tlie_0035 a0e4e4c7cc2d9eb351d8536247d08285 582 SUPERFAMILY SSF55785 231 306 1.02E-5 T 14-10-2018 IPR035965 PAS domain superfamily Tlie_0035 a0e4e4c7cc2d9eb351d8536247d08285 582 Gene3D G3DSA:3.30.450.20 239 350 8.7E-8 T 14-10-2018 Tlie_0035 a0e4e4c7cc2d9eb351d8536247d08285 582 Pfam PF08448 PAS fold 249 346 3.0E-5 T 14-10-2018 IPR013656 PAS fold-4 Tlie_0035 a0e4e4c7cc2d9eb351d8536247d08285 582 Gene3D G3DSA:1.10.287.130 351 417 1.3E-18 T 14-10-2018 Tlie_0035 a0e4e4c7cc2d9eb351d8536247d08285 582 SUPERFAMILY SSF47384 338 417 2.75E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tlie_0035 a0e4e4c7cc2d9eb351d8536247d08285 582 Gene3D G3DSA:3.30.565.10 423 582 9.1E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0035 a0e4e4c7cc2d9eb351d8536247d08285 582 Gene3D G3DSA:1.20.1480.50 152 238 9.1E-7 T 14-10-2018 Tlie_0035 a0e4e4c7cc2d9eb351d8536247d08285 582 SUPERFAMILY SSF55874 407 580 5.11E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0035 a0e4e4c7cc2d9eb351d8536247d08285 582 SMART SM00388 351 418 6.0E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tlie_0035 a0e4e4c7cc2d9eb351d8536247d08285 582 SMART SM00387 463 582 2.5E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_0035 a0e4e4c7cc2d9eb351d8536247d08285 582 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 463 580 3.9E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_0035 a0e4e4c7cc2d9eb351d8536247d08285 582 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 562 3.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_0035 a0e4e4c7cc2d9eb351d8536247d08285 582 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 580 3.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_0035 a0e4e4c7cc2d9eb351d8536247d08285 582 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 3.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_0035 a0e4e4c7cc2d9eb351d8536247d08285 582 Pfam PF00512 His Kinase A (phospho-acceptor) domain 352 417 1.1E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tlie_0978 2ee9e63d2058eff6bf382bb3688f196a 369 SUPERFAMILY SSF53756 9 339 1.26E-63 T 14-10-2018 Tlie_0978 2ee9e63d2058eff6bf382bb3688f196a 369 Gene3D G3DSA:3.40.50.2000 184 343 5.9E-25 T 14-10-2018 Tlie_0978 2ee9e63d2058eff6bf382bb3688f196a 369 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 12 144 1.7E-27 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tlie_0978 2ee9e63d2058eff6bf382bb3688f196a 369 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 200 340 8.5E-23 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Tlie_0978 2ee9e63d2058eff6bf382bb3688f196a 369 Gene3D G3DSA:3.40.50.2000 3 183 2.5E-37 T 14-10-2018 Tlie_1246 062ff41ed22f69ebc58733ab7a7b4ab1 81 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Tlie_1246 062ff41ed22f69ebc58733ab7a7b4ab1 81 Gene3D G3DSA:3.40.30.10 1 77 3.6E-25 T 14-10-2018 Tlie_1246 062ff41ed22f69ebc58733ab7a7b4ab1 81 TIGRFAM TIGR02196 GlrX_YruB: glutaredoxin-like protein, YruB-family 3 76 9.7E-31 T 14-10-2018 IPR011911 Glutaredoxin-like protein, YruB Tlie_1246 062ff41ed22f69ebc58733ab7a7b4ab1 81 SUPERFAMILY SSF52833 3 77 1.89E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tlie_1246 062ff41ed22f69ebc58733ab7a7b4ab1 81 Pfam PF00462 Glutaredoxin 4 63 1.2E-17 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Tlie_0537 e80595879c0d3f8206d3a6b9a36f685e 136 SUPERFAMILY SSF50249 12 94 1.72E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0537 e80595879c0d3f8206d3a6b9a36f685e 136 Pfam PF00575 S1 RNA binding domain 13 83 1.2E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 Tlie_0537 e80595879c0d3f8206d3a6b9a36f685e 136 SMART SM00316 13 83 1.6E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tlie_0537 e80595879c0d3f8206d3a6b9a36f685e 136 Gene3D G3DSA:2.40.50.140 10 92 3.2E-27 T 14-10-2018 Tlie_0002 450d1611365162d0d2651ea4c06609d3 378 PIRSF PIRSF000804 1 372 2.8E-80 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Tlie_0002 450d1611365162d0d2651ea4c06609d3 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 246 7.4E-12 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Tlie_0002 450d1611365162d0d2651ea4c06609d3 378 Gene3D G3DSA:3.10.150.10 1 246 1.6E-87 T 14-10-2018 Tlie_0002 450d1611365162d0d2651ea4c06609d3 378 SUPERFAMILY SSF55979 250 370 8.9E-26 T 14-10-2018 Tlie_0002 450d1611365162d0d2651ea4c06609d3 378 SUPERFAMILY SSF55979 129 248 1.88E-11 T 14-10-2018 Tlie_0002 450d1611365162d0d2651ea4c06609d3 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 4.9E-13 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Tlie_0002 450d1611365162d0d2651ea4c06609d3 378 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 371 3.0E-62 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Tlie_0002 450d1611365162d0d2651ea4c06609d3 378 SUPERFAMILY SSF55979 1 120 2.33E-15 T 14-10-2018 Tlie_0002 450d1611365162d0d2651ea4c06609d3 378 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 369 2.6E-24 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Tlie_0002 450d1611365162d0d2651ea4c06609d3 378 Gene3D G3DSA:3.70.10.10 139 369 1.6E-87 T 14-10-2018 Tlie_0002 450d1611365162d0d2651ea4c06609d3 378 SMART SM00480 17 367 2.7E-54 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 Pfam PF04983 RNA polymerase Rpb1, domain 3 654 794 7.4E-27 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 Gene3D G3DSA:1.10.150.390 1581 1643 2.6E-26 T 14-10-2018 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 Gene3D G3DSA:1.10.132.30 791 925 5.7E-51 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 SUPERFAMILY SSF64484 5 1249 0.0 T 14-10-2018 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 Pfam PF05000 RNA polymerase Rpb1, domain 4 827 890 3.5E-12 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 Pfam PF04997 RNA polymerase Rpb1, domain 1 4 132 4.2E-28 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 SUPERFAMILY SSF64484 1483 1634 1.07E-22 T 14-10-2018 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 Pfam PF00623 RNA polymerase Rpb1, domain 2 509 650 2.5E-37 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 Gene3D G3DSA:1.10.40.90 539 581 5.5E-22 T 14-10-2018 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 Gene3D G3DSA:1.10.1790.20 1083 1252 5.9E-52 T 14-10-2018 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 SMART SM00663 400 679 4.3E-176 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 Gene3D G3DSA:1.10.274.100 655 716 1.2E-23 T 14-10-2018 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 Gene3D G3DSA:2.40.50.100 1099 1165 5.9E-52 T 14-10-2018 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 Gene3D G3DSA:1.10.274.100 717 790 3.7E-19 T 14-10-2018 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 311 1261 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 1 1642 17.437 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 Pfam PF04997 RNA polymerase Rpb1, domain 1 369 507 2.2E-49 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_0639 a190c7991794bf5f7e78fc32a98783db 1661 Pfam PF04998 RNA polymerase Rpb1, domain 5 901 1221 1.8E-59 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tlie_1649 5dd91966d1f29a589d940ab991af7b94 245 SUPERFAMILY SSF142823 6 232 1.19E-54 T 14-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 Tlie_1649 5dd91966d1f29a589d940ab991af7b94 245 Pfam PF04029 2-phosphosulpholactate phosphatase 14 232 2.0E-65 T 14-10-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 Tlie_1649 5dd91966d1f29a589d940ab991af7b94 245 Gene3D G3DSA:3.90.1560.10 4 237 2.1E-67 T 14-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 Tlie_0211 749b707dea90d2534b459aa49efd1c8d 182 Pfam PF00936 BMC domain 97 173 5.9E-18 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0211 749b707dea90d2534b459aa49efd1c8d 182 Pfam PF00936 BMC domain 4 76 5.2E-18 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0211 749b707dea90d2534b459aa49efd1c8d 182 SUPERFAMILY SSF143414 97 181 1.16E-18 T 14-10-2018 IPR037233 CcmK-like superfamily Tlie_0211 749b707dea90d2534b459aa49efd1c8d 182 PIRSF PIRSF034834 1 181 2.5E-47 T 14-10-2018 IPR011238 Polyhedral organelle shell protein PduT Tlie_0211 749b707dea90d2534b459aa49efd1c8d 182 SUPERFAMILY SSF143414 3 93 4.45E-20 T 14-10-2018 IPR037233 CcmK-like superfamily Tlie_0211 749b707dea90d2534b459aa49efd1c8d 182 Gene3D G3DSA:3.30.70.1710 1 79 1.1E-22 T 14-10-2018 Tlie_0211 749b707dea90d2534b459aa49efd1c8d 182 Gene3D G3DSA:3.30.70.1710 80 181 2.0E-27 T 14-10-2018 Tlie_0211 749b707dea90d2534b459aa49efd1c8d 182 SMART SM00877 95 173 1.0E-15 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0211 749b707dea90d2534b459aa49efd1c8d 182 SMART SM00877 3 77 3.4E-14 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0211 749b707dea90d2534b459aa49efd1c8d 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 58 2.0E-10 T 14-10-2018 Tlie_0211 749b707dea90d2534b459aa49efd1c8d 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 97 154 1.0E-9 T 14-10-2018 Tlie_1517 683ebe14006e0153dc435dec7c50c63a 295 SUPERFAMILY SSF103481 51 147 1.44E-6 T 14-10-2018 Tlie_1517 683ebe14006e0153dc435dec7c50c63a 295 Pfam PF00892 EamA-like transporter family 8 144 2.3E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tlie_1517 683ebe14006e0153dc435dec7c50c63a 295 Pfam PF00892 EamA-like transporter family 159 294 2.8E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tlie_1517 683ebe14006e0153dc435dec7c50c63a 295 SUPERFAMILY SSF103481 222 294 1.57E-8 T 14-10-2018 Tlie_1565 3a9419304b961ed99782e2b44a17c01b 164 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 5 159 2.4E-58 T 14-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Tlie_1565 3a9419304b961ed99782e2b44a17c01b 164 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 3 162 34.975 T 14-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Tlie_1565 3a9419304b961ed99782e2b44a17c01b 164 Gene3D G3DSA:3.20.19.10 1 163 7.8E-55 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Tlie_1565 3a9419304b961ed99782e2b44a17c01b 164 Pfam PF00694 Aconitase C-terminal domain 43 101 1.5E-16 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Tlie_1565 3a9419304b961ed99782e2b44a17c01b 164 SUPERFAMILY SSF52016 2 160 2.55E-45 T 14-10-2018 Tlie_1833 123e243a537e7dc72e831388906a871e 169 Pfam PF00694 Aconitase C-terminal domain 22 100 7.4E-19 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Tlie_1833 123e243a537e7dc72e831388906a871e 169 SUPERFAMILY SSF52016 3 163 1.65E-41 T 14-10-2018 Tlie_1833 123e243a537e7dc72e831388906a871e 169 Gene3D G3DSA:3.20.19.10 1 168 1.2E-52 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Tlie_1833 123e243a537e7dc72e831388906a871e 169 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 3 163 33.516 T 14-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Tlie_1833 123e243a537e7dc72e831388906a871e 169 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 5 160 6.8E-54 T 14-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 Gene3D G3DSA:3.10.28.10 390 554 2.9E-18 T 14-10-2018 IPR027434 Homing endonuclease Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 SUPERFAMILY SSF51998 93 913 2.14E-152 T 14-10-2018 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 Pfam PF14890 Intein splicing domain 319 649 2.5E-13 T 14-10-2018 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 15 90 5.3E-31 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 SUPERFAMILY SSF48168 19 92 1.57E-20 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 Gene3D G3DSA:3.20.70.20 5 280 3.4E-112 T 14-10-2018 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 Gene3D G3DSA:3.20.70.20 646 917 1.7E-116 T 14-10-2018 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 TIGRFAM TIGR01445 intein_Nterm: intein N-terminal splicing region 279 347 7.0E-7 T 14-10-2018 IPR006141 Intein N-terminal splicing region GO:0016539 Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 Gene3D G3DSA:2.170.16.10 281 387 3.6E-10 T 14-10-2018 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 628 650 3.1E-7 T 14-10-2018 IPR030934 Intein C-terminal splicing region Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 SUPERFAMILY SSF55608 487 600 8.26E-14 T 14-10-2018 IPR027434 Homing endonuclease Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 PRINTS PR00379 Intein signature 644 653 7.2E-17 T 14-10-2018 IPR006142 Intein GO:0016539 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 PRINTS PR00379 Intein signature 392 404 7.2E-17 T 14-10-2018 IPR006142 Intein GO:0016539 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 PRINTS PR00379 Intein signature 626 643 7.2E-17 T 14-10-2018 IPR006142 Intein GO:0016539 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 PRINTS PR00379 Intein signature 335 348 7.2E-17 T 14-10-2018 IPR006142 Intein GO:0016539 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 PRINTS PR00379 Intein signature 526 541 7.2E-17 T 14-10-2018 IPR006142 Intein GO:0016539 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 PRINTS PR00379 Intein signature 495 507 7.2E-17 T 14-10-2018 IPR006142 Intein GO:0016539 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 Pfam PF02867 Ribonucleotide reductase, barrel domain 775 902 1.3E-35 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 SMART SM00306 277 377 3.9E-11 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 Pfam PF14528 LAGLIDADG-like domain 494 588 5.6E-26 T 14-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 SMART SM00305 611 655 5.0E-4 T 14-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 Pfam PF02867 Ribonucleotide reductase, barrel domain 94 770 5.4E-113 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 Gene3D G3DSA:2.170.16.10 555 645 3.5E-8 T 14-10-2018 Tlie_0294 bc17d63b1ecaad98dfb07561994320aa 1082 SUPERFAMILY SSF51294 278 649 5.1E-39 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Tlie_0167 541aec6ef6f425bc574fccbcb9956467 439 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 7 424 6.9E-168 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 Tlie_0167 541aec6ef6f425bc574fccbcb9956467 439 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 424 3.3E-132 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Tlie_0167 541aec6ef6f425bc574fccbcb9956467 439 Gene3D G3DSA:3.90.1150.10 293 438 3.3E-56 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_0167 541aec6ef6f425bc574fccbcb9956467 439 SUPERFAMILY SSF53383 6 424 7.89E-120 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0167 541aec6ef6f425bc574fccbcb9956467 439 Gene3D G3DSA:3.40.640.10 6 289 1.7E-93 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0167 541aec6ef6f425bc574fccbcb9956467 439 PIRSF PIRSF001434 2 428 3.4E-129 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Tlie_1882 a6e9c803c7b3f077702704edd2c51b2c 268 SUPERFAMILY SSF56784 1 265 1.15E-70 T 14-10-2018 IPR036412 HAD-like superfamily Tlie_1882 a6e9c803c7b3f077702704edd2c51b2c 268 ProSitePatterns PS01229 Hypothetical cof family signature 2. 214 236 - T 14-10-2018 Tlie_1882 a6e9c803c7b3f077702704edd2c51b2c 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 233 5.0E-25 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Tlie_1882 a6e9c803c7b3f077702704edd2c51b2c 268 Gene3D G3DSA:3.40.50.1000 4 261 4.3E-68 T 14-10-2018 IPR023214 HAD superfamily Tlie_1882 a6e9c803c7b3f077702704edd2c51b2c 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 260 4.8E-63 T 14-10-2018 Tlie_1882 a6e9c803c7b3f077702704edd2c51b2c 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 260 1.9E-58 T 14-10-2018 IPR000150 Cof family GO:0016787 Tlie_1882 a6e9c803c7b3f077702704edd2c51b2c 268 Gene3D G3DSA:3.30.1240.10 84 189 4.3E-68 T 14-10-2018 Tlie_0908 5364dea7aba1ac39697a1c7d092782eb 72 SUPERFAMILY SSF81333 4 69 5.75E-12 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Tlie_0908 5364dea7aba1ac39697a1c7d092782eb 72 Gene3D G3DSA:1.20.120.610 1 70 6.7E-15 T 14-10-2018 Tlie_0908 5364dea7aba1ac39697a1c7d092782eb 72 Pfam PF00137 ATP synthase subunit C 8 67 1.5E-13 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Tlie_0303 0e2971c0f2bb6a6451626e5508a93a79 189 Pfam PF13518 Helix-turn-helix domain 18 66 2.5E-7 T 14-10-2018 Tlie_0303 0e2971c0f2bb6a6451626e5508a93a79 189 SUPERFAMILY SSF46689 14 118 3.05E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0918 ba244de72d04b42eeb4308418ffe8fae 382 SUPERFAMILY SSF88723 183 311 1.32E-21 T 14-10-2018 IPR029060 PIN-like domain superfamily Tlie_0918 ba244de72d04b42eeb4308418ffe8fae 382 SMART SM00670 181 290 1.3E-8 T 14-10-2018 IPR002716 PIN domain Tlie_0918 ba244de72d04b42eeb4308418ffe8fae 382 Gene3D G3DSA:3.40.50.1010 179 313 6.4E-48 T 14-10-2018 Tlie_0918 ba244de72d04b42eeb4308418ffe8fae 382 Pfam PF01850 PIN domain 184 292 1.6E-6 T 14-10-2018 IPR002716 PIN domain Tlie_1751 7dd53c34840f2885894e98bb2ba51eaf 356 Pfam PF01032 FecCD transport family 31 352 6.9E-90 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Tlie_1751 7dd53c34840f2885894e98bb2ba51eaf 356 Gene3D G3DSA:1.10.3470.10 16 356 3.1E-100 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tlie_1751 7dd53c34840f2885894e98bb2ba51eaf 356 SUPERFAMILY SSF81345 14 352 1.19E-79 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tlie_1608 ae4f044c4fdfc7520333305a2d634910 397 Gene3D G3DSA:3.30.1540.10 233 324 2.1E-150 T 14-10-2018 Tlie_1608 ae4f044c4fdfc7520333305a2d634910 397 Pfam PF02515 CoA-transferase family III 7 373 2.3E-141 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 Tlie_1608 ae4f044c4fdfc7520333305a2d634910 397 Gene3D G3DSA:3.40.50.10540 7 391 2.1E-150 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Tlie_1608 ae4f044c4fdfc7520333305a2d634910 397 SUPERFAMILY SSF89796 5 397 3.79E-148 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Tlie_1646 32dea55fb4cad99295bbf9585907cca8 400 PIRSF PIRSF001413 3 400 1.4E-164 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tlie_1646 32dea55fb4cad99295bbf9585907cca8 400 Gene3D G3DSA:3.40.50.1100 62 391 1.7E-178 T 14-10-2018 Tlie_1646 32dea55fb4cad99295bbf9585907cca8 400 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 89 103 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tlie_1646 32dea55fb4cad99295bbf9585907cca8 400 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 385 3.1E-52 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tlie_1646 32dea55fb4cad99295bbf9585907cca8 400 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 395 2.2E-180 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tlie_1646 32dea55fb4cad99295bbf9585907cca8 400 SUPERFAMILY SSF53686 14 395 1.7E-137 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tlie_1646 32dea55fb4cad99295bbf9585907cca8 400 Gene3D G3DSA:3.40.50.1100 18 213 1.7E-178 T 14-10-2018 Tlie_1646 32dea55fb4cad99295bbf9585907cca8 400 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 398 49.641 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tlie_0913 e8dc009cabf653c46efc73285bbb0a66 464 Gene3D G3DSA:3.40.50.12240 2 456 1.2E-153 T 14-10-2018 Tlie_0913 e8dc009cabf653c46efc73285bbb0a66 464 SUPERFAMILY SSF52540 80 357 3.88E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0913 e8dc009cabf653c46efc73285bbb0a66 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 134 352 2.3E-61 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0913 e8dc009cabf653c46efc73285bbb0a66 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 343 352 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0913 e8dc009cabf653c46efc73285bbb0a66 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 13 70 8.5E-7 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0913 e8dc009cabf653c46efc73285bbb0a66 464 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 5 460 48.868 T 14-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0291 54c7f1c129b054a5549333374a2a5af1 821 Gene3D G3DSA:3.20.20.330 9 294 2.5E-93 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Tlie_0291 54c7f1c129b054a5549333374a2a5af1 821 Pfam PF02607 B12 binding domain 614 678 3.4E-12 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tlie_0291 54c7f1c129b054a5549333374a2a5af1 821 SUPERFAMILY SSF82282 7 360 2.62E-97 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Tlie_0291 54c7f1c129b054a5549333374a2a5af1 821 Gene3D G3DSA:3.40.50.280 696 821 3.1E-45 T 14-10-2018 Tlie_0291 54c7f1c129b054a5549333374a2a5af1 821 SUPERFAMILY SSF47644 613 690 8.76E-12 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tlie_0291 54c7f1c129b054a5549333374a2a5af1 821 SMART SM01018 608 692 5.6E-11 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tlie_0291 54c7f1c129b054a5549333374a2a5af1 821 Pfam PF00809 Pterin binding enzyme 321 542 3.5E-26 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tlie_0291 54c7f1c129b054a5549333374a2a5af1 821 Gene3D G3DSA:3.20.20.20 313 575 1.9E-77 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tlie_0291 54c7f1c129b054a5549333374a2a5af1 821 SUPERFAMILY SSF51717 318 575 1.83E-67 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tlie_0291 54c7f1c129b054a5549333374a2a5af1 821 SUPERFAMILY SSF52242 688 817 2.09E-39 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tlie_0291 54c7f1c129b054a5549333374a2a5af1 821 Pfam PF02574 Homocysteine S-methyltransferase 18 286 8.3E-62 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 Tlie_0291 54c7f1c129b054a5549333374a2a5af1 821 Gene3D G3DSA:1.10.1240.10 591 691 7.8E-16 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tlie_0291 54c7f1c129b054a5549333374a2a5af1 821 Pfam PF02310 B12 binding domain 699 805 9.4E-25 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tlie_0651 43bfa51e7516b86aa66e9c12283ffc5f 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 27.469 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0651 43bfa51e7516b86aa66e9c12283ffc5f 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 1.2E-36 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Tlie_0651 43bfa51e7516b86aa66e9c12283ffc5f 110 SUPERFAMILY SSF54843 1 110 8.76E-42 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Tlie_0651 43bfa51e7516b86aa66e9c12283ffc5f 110 Gene3D G3DSA:3.90.470.10 1 110 4.5E-45 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Tlie_0651 43bfa51e7516b86aa66e9c12283ffc5f 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.4E-41 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0467 fc4b44befef32bd40a10d84f314030fc 250 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 227 2.3E-51 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 Tlie_0467 fc4b44befef32bd40a10d84f314030fc 250 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 5.8E-18 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Tlie_0467 fc4b44befef32bd40a10d84f314030fc 250 SUPERFAMILY SSF56300 1 224 7.45E-47 T 14-10-2018 Tlie_0467 fc4b44befef32bd40a10d84f314030fc 250 Gene3D G3DSA:3.60.21.10 1 234 9.3E-69 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Tlie_0822 e17cd2c33f4ffd8742ebc027cd1f0203 448 PIRSF PIRSF000185 20 448 1.3E-117 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 Tlie_0822 e17cd2c33f4ffd8742ebc027cd1f0203 448 Gene3D G3DSA:1.10.285.10 4 384 3.5E-167 T 14-10-2018 Tlie_0822 e17cd2c33f4ffd8742ebc027cd1f0203 448 SUPERFAMILY SSF53223 8 195 5.44E-71 T 14-10-2018 Tlie_0822 e17cd2c33f4ffd8742ebc027cd1f0203 448 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 120 133 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tlie_0822 e17cd2c33f4ffd8742ebc027cd1f0203 448 Gene3D G3DSA:3.40.50.10860 53 188 3.5E-167 T 14-10-2018 Tlie_0822 e17cd2c33f4ffd8742ebc027cd1f0203 448 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 201 447 3.3E-88 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tlie_0822 e17cd2c33f4ffd8742ebc027cd1f0203 448 Gene3D G3DSA:3.40.50.720 208 374 3.5E-167 T 14-10-2018 Tlie_0822 e17cd2c33f4ffd8742ebc027cd1f0203 448 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 55 183 2.0E-50 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tlie_0822 e17cd2c33f4ffd8742ebc027cd1f0203 448 SMART SM00839 203 447 9.8E-99 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tlie_0822 e17cd2c33f4ffd8742ebc027cd1f0203 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 1.2E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tlie_0822 e17cd2c33f4ffd8742ebc027cd1f0203 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 373 384 1.2E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tlie_0822 e17cd2c33f4ffd8742ebc027cd1f0203 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 112 126 1.2E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tlie_0822 e17cd2c33f4ffd8742ebc027cd1f0203 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 192 214 1.2E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tlie_0822 e17cd2c33f4ffd8742ebc027cd1f0203 448 Gene3D G3DSA:1.10.285.10 385 448 3.7E-9 T 14-10-2018 Tlie_0822 e17cd2c33f4ffd8742ebc027cd1f0203 448 SUPERFAMILY SSF51735 201 447 8.58E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0589 c4f6708694cf47305251dece4bac25f2 347 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Tlie_0589 c4f6708694cf47305251dece4bac25f2 347 TIGRFAM TIGR00260 thrC: threonine synthase 6 321 4.9E-92 T 14-10-2018 IPR004450 Threonine synthase-like Tlie_0589 c4f6708694cf47305251dece4bac25f2 347 SUPERFAMILY SSF53686 10 333 1.44E-96 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tlie_0589 c4f6708694cf47305251dece4bac25f2 347 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 315 2.9E-74 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tlie_0589 c4f6708694cf47305251dece4bac25f2 347 Gene3D G3DSA:3.40.50.1100 7 321 3.5E-121 T 14-10-2018 Tlie_0589 c4f6708694cf47305251dece4bac25f2 347 Gene3D G3DSA:3.40.50.1100 57 153 3.5E-121 T 14-10-2018 Tlie_0589 c4f6708694cf47305251dece4bac25f2 347 PIRSF PIRSF038945 1 347 2.0E-151 T 14-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 Tlie_0179 1750ca3b0504eaf94fbba155c85ce462 720 Pfam PF02321 Outer membrane efflux protein 45 229 6.2E-10 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tlie_0179 1750ca3b0504eaf94fbba155c85ce462 720 Gene3D G3DSA:1.20.1600.10 32 429 2.6E-24 T 14-10-2018 Tlie_0179 1750ca3b0504eaf94fbba155c85ce462 720 SUPERFAMILY SSF56954 14 428 3.14E-20 T 14-10-2018 Tlie_0494 5885b688d6c6ec909dcccd645ebd8207 601 Gene3D G3DSA:3.30.450.20 188 283 1.4E-29 T 14-10-2018 Tlie_0494 5885b688d6c6ec909dcccd645ebd8207 601 Pfam PF07730 Histidine kinase 396 456 5.8E-9 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Tlie_0494 5885b688d6c6ec909dcccd645ebd8207 601 Gene3D G3DSA:3.30.450.20 93 187 1.4E-29 T 14-10-2018 Tlie_0494 5885b688d6c6ec909dcccd645ebd8207 601 Gene3D G3DSA:1.20.1480.50 284 375 1.7E-10 T 14-10-2018 Tlie_0494 5885b688d6c6ec909dcccd645ebd8207 601 Pfam PF02743 Cache domain 40 277 1.0E-29 T 14-10-2018 IPR033479 Double Cache domain 1 Tlie_0494 5885b688d6c6ec909dcccd645ebd8207 601 SUPERFAMILY SSF158472 317 366 1.7E-7 T 14-10-2018 Tlie_0494 5885b688d6c6ec909dcccd645ebd8207 601 SUPERFAMILY SSF55874 470 593 1.23E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0494 5885b688d6c6ec909dcccd645ebd8207 601 SUPERFAMILY SSF103190 75 198 4.71E-13 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Tlie_0494 5885b688d6c6ec909dcccd645ebd8207 601 SMART SM00387 503 596 1.5E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_0494 5885b688d6c6ec909dcccd645ebd8207 601 SMART SM00304 316 368 6.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tlie_0494 5885b688d6c6ec909dcccd645ebd8207 601 Gene3D G3DSA:3.30.565.10 471 595 8.3E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0494 5885b688d6c6ec909dcccd645ebd8207 601 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 508 594 4.7E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_0666 72a637d909941dc4b7042acb574ac909 431 ProSitePatterns PS00756 Protein secY signature 2. 161 178 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tlie_0666 72a637d909941dc4b7042acb574ac909 431 Pfam PF00344 SecY translocase 69 402 5.6E-116 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tlie_0666 72a637d909941dc4b7042acb574ac909 431 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 418 30.233 T 14-10-2018 IPR026593 Protein translocase subunit SecY Tlie_0666 72a637d909941dc4b7042acb574ac909 431 PIRSF PIRSF004557 1 426 2.4E-127 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tlie_0666 72a637d909941dc4b7042acb574ac909 431 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tlie_0666 72a637d909941dc4b7042acb574ac909 431 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 413 3.2E-125 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tlie_0666 72a637d909941dc4b7042acb574ac909 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 354 372 7.1E-98 T 14-10-2018 Tlie_0666 72a637d909941dc4b7042acb574ac909 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 299 321 7.1E-98 T 14-10-2018 Tlie_0666 72a637d909941dc4b7042acb574ac909 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 7.1E-98 T 14-10-2018 Tlie_0666 72a637d909941dc4b7042acb574ac909 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 7.1E-98 T 14-10-2018 Tlie_0666 72a637d909941dc4b7042acb574ac909 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 260 279 7.1E-98 T 14-10-2018 Tlie_0666 72a637d909941dc4b7042acb574ac909 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 168 191 7.1E-98 T 14-10-2018 Tlie_0666 72a637d909941dc4b7042acb574ac909 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 7.1E-98 T 14-10-2018 Tlie_0666 72a637d909941dc4b7042acb574ac909 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 142 167 7.1E-98 T 14-10-2018 Tlie_0666 72a637d909941dc4b7042acb574ac909 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 387 405 7.1E-98 T 14-10-2018 Tlie_0666 72a637d909941dc4b7042acb574ac909 431 Gene3D G3DSA:1.10.3370.10 1 414 3.9E-167 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tlie_0666 72a637d909941dc4b7042acb574ac909 431 SUPERFAMILY SSF103491 2 409 4.58E-125 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tlie_1814 e791937be50c0b2e8889b9e586647186 358 Gene3D G3DSA:3.40.50.2000 19 349 3.1E-87 T 14-10-2018 Tlie_1814 e791937be50c0b2e8889b9e586647186 358 SUPERFAMILY SSF53756 14 354 1.57E-79 T 14-10-2018 Tlie_1814 e791937be50c0b2e8889b9e586647186 358 Pfam PF00534 Glycosyl transferases group 1 166 329 8.9E-49 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tlie_1814 e791937be50c0b2e8889b9e586647186 358 Gene3D G3DSA:3.40.50.2000 157 336 3.1E-87 T 14-10-2018 Tlie_1814 e791937be50c0b2e8889b9e586647186 358 Pfam PF13477 Glycosyl transferase 4-like 2 133 6.2E-33 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tlie_1330 bc9a938d253c4265560ab48636fd37b7 463 SUPERFAMILY SSF53383 6 460 1.04E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1330 bc9a938d253c4265560ab48636fd37b7 463 PIRSF PIRSF001386 2 462 3.0E-199 T 14-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 Tlie_1330 bc9a938d253c4265560ab48636fd37b7 463 Gene3D G3DSA:3.40.640.10 60 311 1.8E-191 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1330 bc9a938d253c4265560ab48636fd37b7 463 Gene3D G3DSA:3.90.1150.10 8 454 1.8E-191 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1330 bc9a938d253c4265560ab48636fd37b7 463 Pfam PF01212 Beta-eliminating lyase 48 424 2.6E-84 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Tlie_1782 cf989362689eb3ce1d5c618500433602 584 Gene3D G3DSA:3.30.70.270 5 156 1.3E-42 T 14-10-2018 Tlie_1782 cf989362689eb3ce1d5c618500433602 584 Gene3D G3DSA:3.30.1490.100 243 354 5.6E-6 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Tlie_1782 cf989362689eb3ce1d5c618500433602 584 SUPERFAMILY SSF100879 242 346 1.16E-7 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Tlie_1782 cf989362689eb3ce1d5c618500433602 584 Pfam PF11798 IMS family HHH motif 172 199 1.3E-6 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Tlie_1782 cf989362689eb3ce1d5c618500433602 584 SUPERFAMILY SSF56672 4 236 2.13E-61 T 14-10-2018 Tlie_1782 cf989362689eb3ce1d5c618500433602 584 SUPERFAMILY SSF53271 441 581 3.23E-13 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tlie_1782 cf989362689eb3ce1d5c618500433602 584 Pfam PF11799 impB/mucB/samB family C-terminal domain 239 353 1.5E-14 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Tlie_1782 cf989362689eb3ce1d5c618500433602 584 Gene3D G3DSA:3.40.50.2020 441 584 5.4E-11 T 14-10-2018 Tlie_1782 cf989362689eb3ce1d5c618500433602 584 Gene3D G3DSA:1.10.150.20 169 217 2.1E-6 T 14-10-2018 Tlie_1782 cf989362689eb3ce1d5c618500433602 584 Gene3D G3DSA:2.30.40.20 11 74 1.3E-42 T 14-10-2018 Tlie_1782 cf989362689eb3ce1d5c618500433602 584 Pfam PF00817 impB/mucB/samB family 7 149 1.8E-37 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Tlie_1543 1a493c179375befa95ed8b712cd29943 262 Gene3D G3DSA:3.40.50.300 12 254 3.9E-71 T 14-10-2018 Tlie_1543 1a493c179375befa95ed8b712cd29943 262 SUPERFAMILY SSF52540 14 240 1.14E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1543 1a493c179375befa95ed8b712cd29943 262 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 17 244 1.4E-82 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Tlie_1543 1a493c179375befa95ed8b712cd29943 262 Hamap MF_02040 Iron-sulfur cluster carrier protein. 12 258 32.411 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Tlie_1309 441c560979e462153ee75086f4845fd3 311 Gene3D G3DSA:3.20.20.410 1 308 2.3E-77 T 14-10-2018 IPR036520 UPF0759 superfamily Tlie_1309 441c560979e462153ee75086f4845fd3 311 Pfam PF01904 Protein of unknown function DUF72 22 291 4.8E-58 T 14-10-2018 IPR002763 Protein of unknown function DUF72 Tlie_1309 441c560979e462153ee75086f4845fd3 311 SUPERFAMILY SSF117396 2 294 1.44E-65 T 14-10-2018 IPR036520 UPF0759 superfamily Tlie_0348 1d7b41ae58a43cc72fc7acfce3b87199 310 SUPERFAMILY SSF52540 5 249 3.15E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0348 1d7b41ae58a43cc72fc7acfce3b87199 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 229 290 2.0E-12 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tlie_0348 1d7b41ae58a43cc72fc7acfce3b87199 310 SMART SM00382 34 227 3.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0348 1d7b41ae58a43cc72fc7acfce3b87199 310 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0348 1d7b41ae58a43cc72fc7acfce3b87199 310 Pfam PF00005 ABC transporter 25 179 1.5E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0348 1d7b41ae58a43cc72fc7acfce3b87199 310 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 228 309 5.6E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tlie_0348 1d7b41ae58a43cc72fc7acfce3b87199 310 Gene3D G3DSA:3.40.50.300 3 310 2.3E-79 T 14-10-2018 Tlie_1013 13117b52fec0507bf91b626260e3c41d 64 Pfam PF00830 Ribosomal L28 family 3 59 2.7E-21 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1013 13117b52fec0507bf91b626260e3c41d 64 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 63 18.711 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1013 13117b52fec0507bf91b626260e3c41d 64 SUPERFAMILY SSF143800 1 63 6.67E-24 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1013 13117b52fec0507bf91b626260e3c41d 64 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 4.5E-23 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1013 13117b52fec0507bf91b626260e3c41d 64 Gene3D G3DSA:2.30.170.40 19 64 2.4E-20 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0647 bb04f08e689f33e9ac9b54499011df20 208 SUPERFAMILY SSF52166 1 206 1.44E-82 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Tlie_0647 bb04f08e689f33e9ac9b54499011df20 208 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 35.478 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0647 bb04f08e689f33e9ac9b54499011df20 208 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 204 2.8E-79 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0647 bb04f08e689f33e9ac9b54499011df20 208 Pfam PF00573 Ribosomal protein L4/L1 family 18 204 4.7E-74 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Tlie_0647 bb04f08e689f33e9ac9b54499011df20 208 Gene3D G3DSA:3.40.1370.10 1 207 5.9E-84 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Tlie_1376 b7c05dc9c27de3b281b27bc52056e73e 202 Pfam PF02545 Maf-like protein 9 189 8.7E-59 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Tlie_1376 b7c05dc9c27de3b281b27bc52056e73e 202 Hamap MF_00528 Septum formation protein Maf [maf]. 9 194 31.359 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Tlie_1376 b7c05dc9c27de3b281b27bc52056e73e 202 SUPERFAMILY SSF52972 7 189 1.28E-62 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Tlie_1376 b7c05dc9c27de3b281b27bc52056e73e 202 PIRSF PIRSF006305 1 197 8.4E-64 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Tlie_1376 b7c05dc9c27de3b281b27bc52056e73e 202 TIGRFAM TIGR00172 maf: septum formation protein Maf 8 187 2.8E-56 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Tlie_1376 b7c05dc9c27de3b281b27bc52056e73e 202 Gene3D G3DSA:3.90.950.10 7 194 1.5E-69 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Tlie_1142 0ab331f25ff3731082a559c7fc16b222 376 SMART SM00729 7 228 1.7E-36 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tlie_1142 0ab331f25ff3731082a559c7fc16b222 376 Pfam PF04055 Radical SAM superfamily 13 178 3.6E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_1142 0ab331f25ff3731082a559c7fc16b222 376 SUPERFAMILY SSF102114 4 374 2.49E-88 T 14-10-2018 Tlie_1142 0ab331f25ff3731082a559c7fc16b222 376 Gene3D G3DSA:3.80.30.20 2 298 6.0E-86 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tlie_1142 0ab331f25ff3731082a559c7fc16b222 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 9 334 1.6E-69 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 Tlie_0606 bf01f62dcfdcf5fedb7865f76f33955e 592 Pfam PF13155 Toprim-like 254 339 6.3E-17 T 14-10-2018 Tlie_0606 bf01f62dcfdcf5fedb7865f76f33955e 592 TIGRFAM TIGR01391 dnaG: DNA primase 4 403 5.6E-128 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Tlie_0606 bf01f62dcfdcf5fedb7865f76f33955e 592 Gene3D G3DSA:3.90.980.10 106 232 1.0E-39 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Tlie_0606 bf01f62dcfdcf5fedb7865f76f33955e 592 SUPERFAMILY SSF57783 3 94 3.06E-37 T 14-10-2018 Tlie_0606 bf01f62dcfdcf5fedb7865f76f33955e 592 Hamap MF_00974 DNA primase [dnaG]. 1 582 26.523 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Tlie_0606 bf01f62dcfdcf5fedb7865f76f33955e 592 SMART SM00400 32 86 2.1E-31 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Tlie_0606 bf01f62dcfdcf5fedb7865f76f33955e 592 Gene3D G3DSA:3.90.580.10 1 97 5.1E-41 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Tlie_0606 bf01f62dcfdcf5fedb7865f76f33955e 592 SMART SM00493 251 322 3.3E-12 T 14-10-2018 IPR006171 TOPRIM domain Tlie_0606 bf01f62dcfdcf5fedb7865f76f33955e 592 SUPERFAMILY SSF56731 107 402 4.71E-85 T 14-10-2018 Tlie_0606 bf01f62dcfdcf5fedb7865f76f33955e 592 PIRSF PIRSF002811 454 513 140.0 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Tlie_0606 bf01f62dcfdcf5fedb7865f76f33955e 592 PIRSF PIRSF002811 1 455 1.0E-147 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Tlie_0606 bf01f62dcfdcf5fedb7865f76f33955e 592 Pfam PF01807 CHC2 zinc finger 3 95 2.4E-36 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Tlie_0606 bf01f62dcfdcf5fedb7865f76f33955e 592 Pfam PF08275 DNA primase catalytic core, N-terminal domain 117 244 1.2E-37 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Tlie_0606 bf01f62dcfdcf5fedb7865f76f33955e 592 Gene3D G3DSA:3.40.1360.10 233 357 1.2E-37 T 14-10-2018 Tlie_1677 de9a8eebee84f12fcfc1d4af8e7572ae 644 ProSitePatterns PS01244 Aconitase family signature 2. 349 362 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Tlie_1677 de9a8eebee84f12fcfc1d4af8e7572ae 644 SUPERFAMILY SSF52016 437 639 1.08E-55 T 14-10-2018 Tlie_1677 de9a8eebee84f12fcfc1d4af8e7572ae 644 Pfam PF00330 Aconitase family (aconitate hydratase) 7 407 5.0E-108 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1677 de9a8eebee84f12fcfc1d4af8e7572ae 644 Gene3D G3DSA:3.30.499.20 4 267 9.1E-86 T 14-10-2018 Tlie_1677 de9a8eebee84f12fcfc1d4af8e7572ae 644 Gene3D G3DSA:3.20.19.10 463 644 5.5E-48 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Tlie_1677 de9a8eebee84f12fcfc1d4af8e7572ae 644 Gene3D G3DSA:3.30.499.10 270 437 1.7E-45 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Tlie_1677 de9a8eebee84f12fcfc1d4af8e7572ae 644 Pfam PF00694 Aconitase C-terminal domain 519 575 5.5E-23 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Tlie_1677 de9a8eebee84f12fcfc1d4af8e7572ae 644 TIGRFAM TIGR01342 acon_putative: putative aconitate hydratase 4 642 1.0E-278 T 14-10-2018 IPR006250 Aconitase, putative Tlie_1677 de9a8eebee84f12fcfc1d4af8e7572ae 644 PRINTS PR00415 Aconitase family signature 90 98 3.3E-24 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1677 de9a8eebee84f12fcfc1d4af8e7572ae 644 PRINTS PR00415 Aconitase family signature 186 199 3.3E-24 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1677 de9a8eebee84f12fcfc1d4af8e7572ae 644 PRINTS PR00415 Aconitase family signature 124 139 3.3E-24 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1677 de9a8eebee84f12fcfc1d4af8e7572ae 644 PRINTS PR00415 Aconitase family signature 200 213 3.3E-24 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1677 de9a8eebee84f12fcfc1d4af8e7572ae 644 PRINTS PR00415 Aconitase family signature 110 123 3.3E-24 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1677 de9a8eebee84f12fcfc1d4af8e7572ae 644 PRINTS PR00415 Aconitase family signature 349 362 3.3E-24 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_1677 de9a8eebee84f12fcfc1d4af8e7572ae 644 SUPERFAMILY SSF53732 2 419 3.92E-144 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Tlie_1192 fafa5d0a489ce4045c719d2d708d1f41 348 Pfam PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) 3 348 4.3E-166 T 14-10-2018 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 Tlie_1192 fafa5d0a489ce4045c719d2d708d1f41 348 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 4 348 8.5E-148 T 14-10-2018 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 Tlie_1888 eb349a3708ce46eba8090b2e5da75cae 232 Pfam PF00072 Response regulator receiver domain 6 117 1.7E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_1888 eb349a3708ce46eba8090b2e5da75cae 232 Gene3D G3DSA:3.40.50.2300 2 152 1.7E-15 T 14-10-2018 Tlie_1888 eb349a3708ce46eba8090b2e5da75cae 232 Pfam PF08279 HTH domain 167 210 1.9E-5 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Tlie_1888 eb349a3708ce46eba8090b2e5da75cae 232 Gene3D G3DSA:1.10.10.10 161 232 4.8E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1888 eb349a3708ce46eba8090b2e5da75cae 232 SMART SM00448 4 117 7.8E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_1888 eb349a3708ce46eba8090b2e5da75cae 232 SUPERFAMILY SSF52172 2 122 7.4E-19 T 14-10-2018 IPR011006 CheY-like superfamily Tlie_1888 eb349a3708ce46eba8090b2e5da75cae 232 SUPERFAMILY SSF46785 169 230 1.73E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_0430 81af33d75bc6e701f9eb020f217a7ac6 346 PIRSF PIRSF000484 9 343 2.9E-43 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Tlie_0430 81af33d75bc6e701f9eb020f217a7ac6 346 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 123 1.2E-11 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Tlie_0430 81af33d75bc6e701f9eb020f217a7ac6 346 Gene3D G3DSA:3.90.1170.20 14 119 3.3E-30 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Tlie_0430 81af33d75bc6e701f9eb020f217a7ac6 346 SUPERFAMILY SSF54675 20 127 1.28E-27 T 14-10-2018 Tlie_0430 81af33d75bc6e701f9eb020f217a7ac6 346 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 129 318 1.6E-21 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Tlie_0430 81af33d75bc6e701f9eb020f217a7ac6 346 SUPERFAMILY SSF51690 126 341 1.31E-56 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Tlie_0430 81af33d75bc6e701f9eb020f217a7ac6 346 Gene3D G3DSA:3.20.20.70 120 312 1.2E-58 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1402 dc3b12ec20a478621fb33324902e57de 361 SUPERFAMILY SSF55931 12 262 2.44E-70 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Tlie_1402 dc3b12ec20a478621fb33324902e57de 361 Gene3D G3DSA:3.30.590.10 15 260 1.8E-66 T 14-10-2018 Tlie_1402 dc3b12ec20a478621fb33324902e57de 361 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 52 250 6.6E-55 T 14-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 Tlie_1534 f4cda33ca589c42ce1f57f072e947d4d 189 Gene3D G3DSA:1.10.10.10 18 101 2.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1534 f4cda33ca589c42ce1f57f072e947d4d 189 Pfam PF01475 Ferric uptake regulator family 31 144 8.8E-27 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Tlie_1534 f4cda33ca589c42ce1f57f072e947d4d 189 Gene3D G3DSA:3.30.1490.190 102 160 7.4E-12 T 14-10-2018 Tlie_1534 f4cda33ca589c42ce1f57f072e947d4d 189 SUPERFAMILY SSF46785 23 155 3.1E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1674 2390203b97cf117c6e045766481c1b8d 330 Gene3D G3DSA:3.40.190.10 128 255 5.4E-73 T 14-10-2018 Tlie_1674 2390203b97cf117c6e045766481c1b8d 330 PIRSF PIRSF017082 1 330 4.9E-107 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Tlie_1674 2390203b97cf117c6e045766481c1b8d 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 326 1.8E-30 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Tlie_1674 2390203b97cf117c6e045766481c1b8d 330 SUPERFAMILY SSF53850 35 246 1.65E-7 T 14-10-2018 Tlie_1674 2390203b97cf117c6e045766481c1b8d 330 Gene3D G3DSA:3.40.190.150 31 319 5.4E-73 T 14-10-2018 Tlie_0852 cc998da215a30ab057a146389b362183 196 SUPERFAMILY SSF55144 5 189 1.92E-41 T 14-10-2018 IPR009097 Cyclic phosphodiesterase Tlie_0852 cc998da215a30ab057a146389b362183 196 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 4 189 25.644 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Tlie_0852 cc998da215a30ab057a146389b362183 196 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 4 189 5.6E-43 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Tlie_0852 cc998da215a30ab057a146389b362183 196 Pfam PF13563 2'-5' RNA ligase superfamily 20 173 3.0E-16 T 14-10-2018 Tlie_0852 cc998da215a30ab057a146389b362183 196 Gene3D G3DSA:3.90.1140.10 4 191 4.1E-51 T 14-10-2018 Tlie_1357 cfe63e81577ab6d5d0ab7b1861828bf5 161 SUPERFAMILY SSF55083 3 156 3.01E-52 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Tlie_1357 cfe63e81577ab6d5d0ab7b1861828bf5 161 Gene3D G3DSA:3.30.70.560 2 161 1.2E-60 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Tlie_1357 cfe63e81577ab6d5d0ab7b1861828bf5 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 132 2.1E-37 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Tlie_1357 cfe63e81577ab6d5d0ab7b1861828bf5 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 132 3.7E-43 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Tlie_1357 cfe63e81577ab6d5d0ab7b1861828bf5 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 87 98 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Tlie_0626 06b1d6748abb04d51c4b281b7938cb57 96 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 83 16.02 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Tlie_0626 06b1d6748abb04d51c4b281b7938cb57 96 Gene3D G3DSA:3.30.1070.10 1 80 8.0E-18 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Tlie_0626 06b1d6748abb04d51c4b281b7938cb57 96 SUPERFAMILY SSF55229 30 82 3.01E-13 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Tlie_0626 06b1d6748abb04d51c4b281b7938cb57 96 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 78 1.0E-25 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Tlie_0626 06b1d6748abb04d51c4b281b7938cb57 96 Pfam PF03776 Septum formation topological specificity factor MinE 13 78 4.8E-26 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Tlie_1181 e79f586e8290e7c72b8c2b77d5c7c09b 185 Gene3D G3DSA:1.10.132.20 12 182 6.1E-72 T 14-10-2018 Tlie_1181 e79f586e8290e7c72b8c2b77d5c7c09b 185 SUPERFAMILY SSF55194 6 184 5.23E-71 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Tlie_1181 e79f586e8290e7c72b8c2b77d5c7c09b 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 184 2.2E-66 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Tlie_1181 e79f586e8290e7c72b8c2b77d5c7c09b 185 Gene3D G3DSA:3.30.1360.40 31 105 6.1E-72 T 14-10-2018 Tlie_1181 e79f586e8290e7c72b8c2b77d5c7c09b 185 Pfam PF01765 Ribosome recycling factor 20 183 1.7E-64 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Tlie_1181 e79f586e8290e7c72b8c2b77d5c7c09b 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.224 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Tlie_0900 a4cc88d8150101d91560ebdd4c93c364 220 SUPERFAMILY SSF63380 1 88 2.98E-20 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tlie_0900 a4cc88d8150101d91560ebdd4c93c364 220 SUPERFAMILY SSF63380 93 195 6.21E-34 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tlie_0900 a4cc88d8150101d91560ebdd4c93c364 220 Gene3D G3DSA:2.40.30.20 102 203 2.4E-35 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0900 a4cc88d8150101d91560ebdd4c93c364 220 Pfam PF00677 Lumazine binding domain 3 87 3.4E-19 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tlie_0900 a4cc88d8150101d91560ebdd4c93c364 220 Pfam PF00677 Lumazine binding domain 100 184 2.1E-25 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tlie_0900 a4cc88d8150101d91560ebdd4c93c364 220 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 1.2E-61 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tlie_0900 a4cc88d8150101d91560ebdd4c93c364 220 PIRSF PIRSF000498 1 207 7.3E-70 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tlie_0900 a4cc88d8150101d91560ebdd4c93c364 220 Gene3D G3DSA:2.40.30.20 1 88 5.0E-24 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_0282 419a5d69b1361529daf87545147cfbb8 406 Pfam PF04963 Sigma-54 factor, core binding domain 76 258 1.7E-34 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 Tlie_0282 419a5d69b1361529daf87545147cfbb8 406 PIRSF PIRSF000774 4 60 11.0 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tlie_0282 419a5d69b1361529daf87545147cfbb8 406 PIRSF PIRSF000774 57 406 1.1E-44 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tlie_0282 419a5d69b1361529daf87545147cfbb8 406 Pfam PF04552 Sigma-54, DNA binding domain 269 405 5.5E-15 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding Tlie_0282 419a5d69b1361529daf87545147cfbb8 406 PRINTS PR00045 Sigma-54 factor signature 327 339 1.4E-6 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tlie_0282 419a5d69b1361529daf87545147cfbb8 406 PRINTS PR00045 Sigma-54 factor signature 149 166 1.4E-6 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tlie_0282 419a5d69b1361529daf87545147cfbb8 406 Gene3D G3DSA:1.10.10.1330 80 186 1.1E-13 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Tlie_1342 726f9fef1f0b6490df71d223f1eec683 152 Gene3D G3DSA:1.10.1510.10 3 93 7.1E-24 T 14-10-2018 Tlie_1342 726f9fef1f0b6490df71d223f1eec683 152 Gene3D G3DSA:1.10.10.410 94 149 4.4E-21 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Tlie_1342 726f9fef1f0b6490df71d223f1eec683 152 Pfam PF09424 Yqey-like protein 6 149 2.1E-42 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 Tlie_1342 726f9fef1f0b6490df71d223f1eec683 152 SUPERFAMILY SSF89095 6 149 6.28E-34 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Tlie_1270 1425b58262d3d61e41124301cd1d4274 69 SUPERFAMILY SSF52540 2 49 9.43E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0164 5c2a1f71eb44d63d1705098425510334 507 Pfam PF13500 AAA domain 4 228 2.5E-18 T 14-10-2018 Tlie_0164 5c2a1f71eb44d63d1705098425510334 507 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 507 175.402 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Tlie_0164 5c2a1f71eb44d63d1705098425510334 507 Gene3D G3DSA:3.40.50.300 3 238 2.9E-54 T 14-10-2018 Tlie_0164 5c2a1f71eb44d63d1705098425510334 507 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 449 4.9E-59 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Tlie_0164 5c2a1f71eb44d63d1705098425510334 507 Gene3D G3DSA:3.40.50.880 251 445 1.7E-17 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_0164 5c2a1f71eb44d63d1705098425510334 507 SUPERFAMILY SSF52317 256 461 2.66E-34 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_0164 5c2a1f71eb44d63d1705098425510334 507 SUPERFAMILY SSF52540 1 230 9.97E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0164 5c2a1f71eb44d63d1705098425510334 507 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 6 499 6.5E-169 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Tlie_0153 2983889afecfec5ebfab0165ec18ab3c 259 Pfam PF00005 ABC transporter 22 166 2.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0153 2983889afecfec5ebfab0165ec18ab3c 259 Gene3D G3DSA:3.40.50.300 1 233 9.5E-59 T 14-10-2018 Tlie_0153 2983889afecfec5ebfab0165ec18ab3c 259 SUPERFAMILY SSF52540 4 215 6.61E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0153 2983889afecfec5ebfab0165ec18ab3c 259 SMART SM00382 30 222 3.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0204 7a5ad8ebbb465f03b927606a0a4b66dc 293 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 26 274 4.1E-74 T 14-10-2018 IPR013366 Ethanolamine utilisation EutJ Tlie_0204 7a5ad8ebbb465f03b927606a0a4b66dc 293 SUPERFAMILY SSF53067 23 278 4.87E-26 T 14-10-2018 Tlie_0204 7a5ad8ebbb465f03b927606a0a4b66dc 293 Gene3D G3DSA:3.30.420.40 23 273 3.2E-81 T 14-10-2018 Tlie_0204 7a5ad8ebbb465f03b927606a0a4b66dc 293 Gene3D G3DSA:3.30.420.40 143 260 3.2E-81 T 14-10-2018 Tlie_0204 7a5ad8ebbb465f03b927606a0a4b66dc 293 Pfam PF11104 Type IV pilus assembly protein PilM; 143 261 2.6E-11 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM Tlie_1635 8da57b21be48062d8bbedde921b1f779 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 7 132 4.5E-28 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Tlie_1635 8da57b21be48062d8bbedde921b1f779 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 52 70 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Tlie_1635 8da57b21be48062d8bbedde921b1f779 141 Pfam PF02082 Transcriptional regulator 6 86 2.6E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Tlie_1635 8da57b21be48062d8bbedde921b1f779 141 SUPERFAMILY SSF46785 7 137 6.21E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1635 8da57b21be48062d8bbedde921b1f779 141 Gene3D G3DSA:1.10.10.10 2 141 9.0E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0969 dca1fe8bd05755764790d9f397ddc97d 141 Gene3D G3DSA:2.40.330.20 1 141 2.0E-45 T 14-10-2018 IPR038619 MraZ superfamily Tlie_0969 dca1fe8bd05755764790d9f397ddc97d 141 SUPERFAMILY SSF89447 1 136 4.71E-42 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tlie_0969 dca1fe8bd05755764790d9f397ddc97d 141 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 140 2.8E-38 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Tlie_0969 dca1fe8bd05755764790d9f397ddc97d 141 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 141 42.271 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Tlie_0969 dca1fe8bd05755764790d9f397ddc97d 141 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 138 5.0E-34 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Tlie_0969 dca1fe8bd05755764790d9f397ddc97d 141 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 7.3E-17 T 14-10-2018 IPR020603 MraZ domain Tlie_0969 dca1fe8bd05755764790d9f397ddc97d 141 Pfam PF02381 MraZ protein, putative antitoxin-like 73 135 1.6E-16 T 14-10-2018 IPR020603 MraZ domain Tlie_1222 f426c9a5247eef8afaa88ab0f71978eb 280 Gene3D G3DSA:3.30.470.20 42 260 6.0E-45 T 14-10-2018 Tlie_1222 f426c9a5247eef8afaa88ab0f71978eb 280 Pfam PF07478 D-ala D-ala ligase C-terminus 74 259 1.4E-20 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_1222 f426c9a5247eef8afaa88ab0f71978eb 280 Gene3D G3DSA:3.30.1490.20 61 122 6.0E-45 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tlie_1222 f426c9a5247eef8afaa88ab0f71978eb 280 SUPERFAMILY SSF56059 44 263 4.42E-30 T 14-10-2018 Tlie_0111 8fe4863748cae7fa0546675354d1c10a 233 SUPERFAMILY SSF51269 110 169 3.66E-7 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 Tlie_0111 8fe4863748cae7fa0546675354d1c10a 233 Pfam PF13144 Chaperone for flagella basal body P-ring formation 93 228 5.2E-29 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Tlie_0111 8fe4863748cae7fa0546675354d1c10a 233 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 106 228 3.6E-31 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Tlie_0111 8fe4863748cae7fa0546675354d1c10a 233 Gene3D G3DSA:2.30.30.760 172 233 2.7E-10 T 14-10-2018 Tlie_0111 8fe4863748cae7fa0546675354d1c10a 233 SMART SM00858 107 169 3.4E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Tlie_0111 8fe4863748cae7fa0546675354d1c10a 233 Gene3D G3DSA:3.90.1210.10 108 171 2.0E-6 T 14-10-2018 Tlie_1166 4252e0ab2af901d74385f73c77c86482 395 SUPERFAMILY SSF50447 16 84 3.88E-7 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tlie_1166 4252e0ab2af901d74385f73c77c86482 395 Gene3D G3DSA:2.40.30.130 7 84 2.3E-5 T 14-10-2018 Tlie_1166 4252e0ab2af901d74385f73c77c86482 395 Gene3D G3DSA:3.30.980.10 85 238 1.0E-25 T 14-10-2018 Tlie_1166 4252e0ab2af901d74385f73c77c86482 395 Pfam PF01411 tRNA synthetases class II (A) 17 88 4.2E-6 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Tlie_1166 4252e0ab2af901d74385f73c77c86482 395 SUPERFAMILY SSF55186 84 229 2.75E-24 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Tlie_0485 d5b1bb6554b782b03eee28c5a57dcd45 248 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 236 1.4E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tlie_0485 d5b1bb6554b782b03eee28c5a57dcd45 248 SUPERFAMILY SSF161098 56 236 3.01E-29 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_0485 d5b1bb6554b782b03eee28c5a57dcd45 248 Gene3D G3DSA:1.10.3720.10 55 244 5.9E-24 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_0512 c068fe0c47c84cd69772ea82e70380e0 332 Gene3D G3DSA:3.40.190.10 116 255 1.1E-90 T 14-10-2018 Tlie_0512 c068fe0c47c84cd69772ea82e70380e0 332 SUPERFAMILY SSF53850 26 320 5.06E-75 T 14-10-2018 Tlie_0512 c068fe0c47c84cd69772ea82e70380e0 332 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 2 319 2.7E-89 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Tlie_0512 c068fe0c47c84cd69772ea82e70380e0 332 Pfam PF16868 NMT1-like family 30 319 8.0E-84 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Tlie_0512 c068fe0c47c84cd69772ea82e70380e0 332 Gene3D G3DSA:3.40.190.10 30 319 1.1E-90 T 14-10-2018 Tlie_1368 bf2de16754b5cefd07136a9da3138c38 404 Gene3D G3DSA:2.30.42.10 112 199 2.9E-92 T 14-10-2018 Tlie_1368 bf2de16754b5cefd07136a9da3138c38 404 SMART SM00228 112 183 1.6E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tlie_1368 bf2de16754b5cefd07136a9da3138c38 404 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 70 377 1.1E-103 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Tlie_1368 bf2de16754b5cefd07136a9da3138c38 404 SUPERFAMILY SSF52096 60 383 1.82E-75 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tlie_1368 bf2de16754b5cefd07136a9da3138c38 404 SMART SM00245 185 372 1.3E-72 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Tlie_1368 bf2de16754b5cefd07136a9da3138c38 404 Pfam PF03572 Peptidase family S41 209 371 1.6E-55 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Tlie_1368 bf2de16754b5cefd07136a9da3138c38 404 Gene3D G3DSA:3.30.750.44 69 347 2.9E-92 T 14-10-2018 Tlie_1368 bf2de16754b5cefd07136a9da3138c38 404 SUPERFAMILY SSF50156 104 193 1.26E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Tlie_1368 bf2de16754b5cefd07136a9da3138c38 404 Gene3D G3DSA:3.90.226.10 200 369 2.9E-92 T 14-10-2018 Tlie_1368 bf2de16754b5cefd07136a9da3138c38 404 Pfam PF13180 PDZ domain 112 186 4.8E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tlie_0384 ecbace4efcaae30b2cda4c95b07f555d 248 Pfam PF14451 Mut7-C ubiquitin 2 78 2.6E-17 T 14-10-2018 IPR027798 Ubiquitin Mut7-C domain Tlie_0384 ecbace4efcaae30b2cda4c95b07f555d 248 Pfam PF01927 Mut7-C RNAse domain 99 240 5.6E-43 T 14-10-2018 IPR002782 Mut7-C RNAse domain Tlie_0028 8c7859835bc60a088015967401193606 553 Pfam PF00920 Dehydratase family 31 549 1.7E-229 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tlie_0028 8c7859835bc60a088015967401193606 553 SUPERFAMILY SSF52016 372 552 4.79E-61 T 14-10-2018 Tlie_0028 8c7859835bc60a088015967401193606 553 Gene3D G3DSA:3.50.30.80 372 523 4.8E-57 T 14-10-2018 Tlie_0028 8c7859835bc60a088015967401193606 553 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 460 471 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tlie_0028 8c7859835bc60a088015967401193606 553 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 552 47.381 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tlie_0028 8c7859835bc60a088015967401193606 553 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 552 4.2E-239 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tlie_0028 8c7859835bc60a088015967401193606 553 SUPERFAMILY SSF143975 2 371 2.22E-142 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tlie_0399 b25b360ebe471bdd33fa80d26e9c4780 187 Gene3D G3DSA:3.20.130.10 1 177 2.3E-76 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Tlie_0399 b25b360ebe471bdd33fa80d26e9c4780 187 SUPERFAMILY SSF117457 7 176 2.62E-66 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Tlie_0399 b25b360ebe471bdd33fa80d26e9c4780 187 Pfam PF05683 Fumarase C-terminus 4 177 3.5E-64 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Tlie_0399 b25b360ebe471bdd33fa80d26e9c4780 187 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 16 176 2.7E-61 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Tlie_0427 3f6c1a932070842d14c7c2b1525aa0c6 257 Gene3D G3DSA:3.30.230.70 11 239 8.0E-65 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tlie_0427 3f6c1a932070842d14c7c2b1525aa0c6 257 Pfam PF01138 3' exoribonuclease family, domain 1 12 142 2.6E-23 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tlie_0427 3f6c1a932070842d14c7c2b1525aa0c6 257 SUPERFAMILY SSF55666 154 238 2.62E-24 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tlie_0427 3f6c1a932070842d14c7c2b1525aa0c6 257 ProSitePatterns PS01277 Ribonuclease PH signature. 118 131 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site Tlie_0427 3f6c1a932070842d14c7c2b1525aa0c6 257 SUPERFAMILY SSF54211 4 183 1.97E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_0427 3f6c1a932070842d14c7c2b1525aa0c6 257 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 4 238 4.3E-109 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Tlie_0427 3f6c1a932070842d14c7c2b1525aa0c6 257 Pfam PF03725 3' exoribonuclease family, domain 2 160 225 2.2E-10 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tlie_0427 3f6c1a932070842d14c7c2b1525aa0c6 257 Hamap MF_00564 Ribonuclease PH [rph]. 13 239 43.666 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Tlie_1084 e853b2c39c062bc0a408129048f355b6 429 Pfam PF02470 MlaD protein 34 108 3.7E-13 T 14-10-2018 IPR003399 Mce/MlaD Tlie_1084 e853b2c39c062bc0a408129048f355b6 429 Gene3D G3DSA:1.10.287.950 110 296 2.9E-5 T 14-10-2018 Tlie_0281 d87d532772fd44e41f8db2d2b9b2bcfa 416 Pfam PF01566 Natural resistance-associated macrophage protein 64 384 5.3E-22 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Tlie_1136 519f8c9345a3e3d79a5af5dcfe9ef3ea 286 Pfam PF08544 GHMP kinases C terminal 236 265 1.8E-5 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain Tlie_1136 519f8c9345a3e3d79a5af5dcfe9ef3ea 286 SUPERFAMILY SSF55060 166 276 2.06E-12 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Tlie_1136 519f8c9345a3e3d79a5af5dcfe9ef3ea 286 Gene3D G3DSA:3.30.230.10 1 154 2.3E-31 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tlie_1136 519f8c9345a3e3d79a5af5dcfe9ef3ea 286 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 2 278 20.528 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Tlie_1136 519f8c9345a3e3d79a5af5dcfe9ef3ea 286 Gene3D G3DSA:3.30.70.890 162 281 6.6E-15 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Tlie_1136 519f8c9345a3e3d79a5af5dcfe9ef3ea 286 SUPERFAMILY SSF54211 3 153 2.05E-21 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_1637 749f73ca66c2d02ee26bad8c03193408 394 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 376 3.6E-55 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tlie_1637 749f73ca66c2d02ee26bad8c03193408 394 Gene3D G3DSA:2.40.420.20 43 374 3.9E-87 T 14-10-2018 Tlie_1637 749f73ca66c2d02ee26bad8c03193408 394 SUPERFAMILY SSF111369 50 299 3.92E-30 T 14-10-2018 Tlie_1637 749f73ca66c2d02ee26bad8c03193408 394 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 294 2.2E-25 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tlie_1637 749f73ca66c2d02ee26bad8c03193408 394 Gene3D G3DSA:2.40.50.100 59 222 3.9E-87 T 14-10-2018 Tlie_1637 749f73ca66c2d02ee26bad8c03193408 394 Gene3D G3DSA:1.10.287.470 93 184 3.9E-87 T 14-10-2018 Tlie_1637 749f73ca66c2d02ee26bad8c03193408 394 Gene3D G3DSA:2.40.30.170 48 301 3.9E-87 T 14-10-2018 Tlie_0279 0142f0a5af864b1b96199b87bc1ddfca 355 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 313 2.5E-90 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Tlie_0279 0142f0a5af864b1b96199b87bc1ddfca 355 SMART SM00797 24 309 2.7E-127 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Tlie_0279 0142f0a5af864b1b96199b87bc1ddfca 355 SUPERFAMILY SSF50891 183 298 2.09E-8 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Tlie_0279 0142f0a5af864b1b96199b87bc1ddfca 355 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 291 5.3E-87 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Tlie_0279 0142f0a5af864b1b96199b87bc1ddfca 355 Gene3D G3DSA:2.40.100.10 181 319 8.2E-45 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Tlie_0397 1fc60ffeeaf9a0c16c94774c9f1ee79e 360 Gene3D G3DSA:3.40.50.1100 49 358 8.2E-103 T 14-10-2018 Tlie_0397 1fc60ffeeaf9a0c16c94774c9f1ee79e 360 Gene3D G3DSA:3.40.50.1100 92 186 8.2E-103 T 14-10-2018 Tlie_0397 1fc60ffeeaf9a0c16c94774c9f1ee79e 360 SUPERFAMILY SSF53686 5 359 1.7E-86 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tlie_0397 1fc60ffeeaf9a0c16c94774c9f1ee79e 360 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 84 97 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Tlie_0397 1fc60ffeeaf9a0c16c94774c9f1ee79e 360 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 62 352 1.0E-71 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tlie_1763 b55fe91b6102d68c34edfdcb3b342ef5 336 Gene3D G3DSA:3.40.1190.10 4 176 1.8E-11 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tlie_1763 b55fe91b6102d68c34edfdcb3b342ef5 336 SUPERFAMILY SSF53623 5 173 3.05E-11 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tlie_0816 989a2ab0ba77da53825ae1e7562d71c5 546 Gene3D G3DSA:3.30.70.260 469 542 1.4E-18 T 14-10-2018 Tlie_0816 989a2ab0ba77da53825ae1e7562d71c5 546 SUPERFAMILY SSF143548 333 464 2.62E-19 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Tlie_0816 989a2ab0ba77da53825ae1e7562d71c5 546 SUPERFAMILY SSF51735 102 287 1.79E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0816 989a2ab0ba77da53825ae1e7562d71c5 546 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 286 1.1E-60 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Tlie_0816 989a2ab0ba77da53825ae1e7562d71c5 546 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Tlie_0816 989a2ab0ba77da53825ae1e7562d71c5 546 Gene3D G3DSA:3.30.1330.90 325 468 8.9E-22 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Tlie_0816 989a2ab0ba77da53825ae1e7562d71c5 546 SUPERFAMILY SSF55021 458 537 3.07E-17 T 14-10-2018 Tlie_0816 989a2ab0ba77da53825ae1e7562d71c5 546 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 193 215 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Tlie_0816 989a2ab0ba77da53825ae1e7562d71c5 546 SUPERFAMILY SSF52283 1 136 1.63E-34 T 14-10-2018 Tlie_0816 989a2ab0ba77da53825ae1e7562d71c5 546 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 541 7.6E-177 T 14-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 Tlie_0816 989a2ab0ba77da53825ae1e7562d71c5 546 Gene3D G3DSA:3.40.50.720 5 310 1.5E-114 T 14-10-2018 Tlie_0816 989a2ab0ba77da53825ae1e7562d71c5 546 Pfam PF01842 ACT domain 471 532 7.7E-10 T 14-10-2018 IPR002912 ACT domain Tlie_0816 989a2ab0ba77da53825ae1e7562d71c5 546 Gene3D G3DSA:3.40.50.720 98 284 1.5E-114 T 14-10-2018 Tlie_0816 989a2ab0ba77da53825ae1e7562d71c5 546 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 318 2.1E-36 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Tlie_0449 75d87767a582300b816b0b6779559c2e 134 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 69 108 3.0E-12 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0449 75d87767a582300b816b0b6779559c2e 134 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 9 59 3.9E-22 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0449 75d87767a582300b816b0b6779559c2e 134 SUPERFAMILY SSF54736 63 134 9.07E-26 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Tlie_0449 75d87767a582300b816b0b6779559c2e 134 TIGRFAM TIGR00855 L12: ribosomal protein bL12 8 134 2.2E-50 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0449 75d87767a582300b816b0b6779559c2e 134 Gene3D G3DSA:1.20.5.710 8 63 2.2E-23 T 14-10-2018 Tlie_0449 75d87767a582300b816b0b6779559c2e 134 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 6 134 26.874 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0449 75d87767a582300b816b0b6779559c2e 134 SUPERFAMILY SSF48300 8 70 2.49E-17 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0449 75d87767a582300b816b0b6779559c2e 134 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 68 134 5.8E-32 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0449 75d87767a582300b816b0b6779559c2e 134 Gene3D G3DSA:3.30.1390.10 64 134 1.6E-32 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Tlie_0543 1ea057063f13b9c4e4324b3ffb40e72a 196 Gene3D G3DSA:1.20.120.1810 2 103 3.4E-21 T 14-10-2018 Tlie_0543 1ea057063f13b9c4e4324b3ffb40e72a 196 Pfam PF04542 Sigma-70 region 2 36 102 6.2E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tlie_0543 1ea057063f13b9c4e4324b3ffb40e72a 196 SUPERFAMILY SSF88946 13 101 1.31E-27 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tlie_0543 1ea057063f13b9c4e4324b3ffb40e72a 196 Gene3D G3DSA:1.10.10.10 111 190 1.8E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0543 1ea057063f13b9c4e4324b3ffb40e72a 196 SUPERFAMILY SSF88659 122 187 2.24E-9 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tlie_0543 1ea057063f13b9c4e4324b3ffb40e72a 196 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 32 185 1.5E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tlie_0401 f28ce687a3b3ce6480d2c2d5f2062527 560 Gene3D G3DSA:3.20.20.240 1 560 7.2E-259 T 14-10-2018 Tlie_0401 f28ce687a3b3ce6480d2c2d5f2062527 560 SUPERFAMILY SSF51703 14 554 7.53E-221 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Tlie_0401 f28ce687a3b3ce6480d2c2d5f2062527 560 Pfam PF01642 Methylmalonyl-CoA mutase 37 552 5.3E-233 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Tlie_0401 f28ce687a3b3ce6480d2c2d5f2062527 560 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 35 558 4.8E-254 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Tlie_0506 2bd4a98509c01f93cf5aae2fa333e4e4 492 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 4 486 35.241 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 Tlie_0506 2bd4a98509c01f93cf5aae2fa333e4e4 492 SUPERFAMILY SSF53187 167 482 1.49E-114 T 14-10-2018 Tlie_0506 2bd4a98509c01f93cf5aae2fa333e4e4 492 PRINTS PR00481 Cytosol aminopeptidase signature 328 348 3.0E-50 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Tlie_0506 2bd4a98509c01f93cf5aae2fa333e4e4 492 PRINTS PR00481 Cytosol aminopeptidase signature 356 371 3.0E-50 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Tlie_0506 2bd4a98509c01f93cf5aae2fa333e4e4 492 PRINTS PR00481 Cytosol aminopeptidase signature 269 290 3.0E-50 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Tlie_0506 2bd4a98509c01f93cf5aae2fa333e4e4 492 PRINTS PR00481 Cytosol aminopeptidase signature 306 327 3.0E-50 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Tlie_0506 2bd4a98509c01f93cf5aae2fa333e4e4 492 PRINTS PR00481 Cytosol aminopeptidase signature 247 264 3.0E-50 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Tlie_0506 2bd4a98509c01f93cf5aae2fa333e4e4 492 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 31 139 4.4E-19 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Tlie_0506 2bd4a98509c01f93cf5aae2fa333e4e4 492 Gene3D G3DSA:3.40.220.10 1 152 3.8E-27 T 14-10-2018 Tlie_0506 2bd4a98509c01f93cf5aae2fa333e4e4 492 SUPERFAMILY SSF52949 3 161 8.83E-24 T 14-10-2018 Tlie_0506 2bd4a98509c01f93cf5aae2fa333e4e4 492 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 171 477 3.0E-120 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Tlie_0506 2bd4a98509c01f93cf5aae2fa333e4e4 492 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 332 339 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Tlie_0506 2bd4a98509c01f93cf5aae2fa333e4e4 492 Gene3D G3DSA:3.40.630.10 153 488 3.3E-135 T 14-10-2018 Tlie_1889 fb30ac59c1ca1b1dd78603b065357ecf 544 SUPERFAMILY SSF53720 9 529 2.09E-117 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Tlie_1889 fb30ac59c1ca1b1dd78603b065357ecf 544 Gene3D G3DSA:3.40.605.10 15 528 2.2E-202 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Tlie_1889 fb30ac59c1ca1b1dd78603b065357ecf 544 TIGRFAM TIGR01236 D1pyr5carbox1: 1-pyrroline-5-carboxylate dehydrogenase 12 541 2.5E-225 T 14-10-2018 IPR005931 Delta-1-pyrroline-5-carboxylate dehydrogenase GO:0003842|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853|Reactome: R-HSA-389661|Reactome: R-HSA-70688 Tlie_1889 fb30ac59c1ca1b1dd78603b065357ecf 544 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 322 333 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Tlie_1889 fb30ac59c1ca1b1dd78603b065357ecf 544 Pfam PF00171 Aldehyde dehydrogenase family 58 515 5.3E-102 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Tlie_1889 fb30ac59c1ca1b1dd78603b065357ecf 544 Gene3D G3DSA:3.40.309.10 299 496 2.2E-202 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Tlie_0550 80375291521e603b58e7d198053f6a2d 270 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 256 2.7E-26 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 Tlie_0550 80375291521e603b58e7d198053f6a2d 270 Gene3D G3DSA:2.160.10.10 1 191 2.6E-53 T 14-10-2018 Tlie_0550 80375291521e603b58e7d198053f6a2d 270 PIRSF PIRSF000456 1 265 1.0E-90 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Tlie_0550 80375291521e603b58e7d198053f6a2d 270 SUPERFAMILY SSF51161 3 256 3.81E-72 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Tlie_0550 80375291521e603b58e7d198053f6a2d 270 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 48 1.3E-7 T 14-10-2018 IPR001451 Hexapeptide repeat Tlie_0550 80375291521e603b58e7d198053f6a2d 270 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 138 1.4E-6 T 14-10-2018 IPR001451 Hexapeptide repeat Tlie_0550 80375291521e603b58e7d198053f6a2d 270 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 141 169 6.9E-4 T 14-10-2018 IPR001451 Hexapeptide repeat Tlie_0550 80375291521e603b58e7d198053f6a2d 270 Gene3D G3DSA:1.20.1180.10 193 258 1.0E-20 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 Tlie_0550 80375291521e603b58e7d198053f6a2d 270 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 5 256 5.0E-88 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Tlie_1032 a3ad861c8ffd185070fbbe520c1f789e 201 SUPERFAMILY SSF47781 64 133 9.21E-19 T 14-10-2018 IPR010994 RuvA domain 2-like Tlie_1032 a3ad861c8ffd185070fbbe520c1f789e 201 Gene3D G3DSA:2.40.50.140 1 63 1.3E-17 T 14-10-2018 Tlie_1032 a3ad861c8ffd185070fbbe520c1f789e 201 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 189 1.6E-36 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Tlie_1032 a3ad861c8ffd185070fbbe520c1f789e 201 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 194 24.307 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Tlie_1032 a3ad861c8ffd185070fbbe520c1f789e 201 SUPERFAMILY SSF46929 147 192 3.14E-5 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily Tlie_1032 a3ad861c8ffd185070fbbe520c1f789e 201 SMART SM00278 107 126 1.7 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tlie_1032 a3ad861c8ffd185070fbbe520c1f789e 201 SMART SM00278 72 91 24.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tlie_1032 a3ad861c8ffd185070fbbe520c1f789e 201 Gene3D G3DSA:1.10.150.20 66 132 6.9E-22 T 14-10-2018 Tlie_1032 a3ad861c8ffd185070fbbe520c1f789e 201 Pfam PF07499 RuvA, C-terminal domain 149 192 4.6E-5 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 Tlie_1032 a3ad861c8ffd185070fbbe520c1f789e 201 SUPERFAMILY SSF50249 1 62 1.26E-9 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_1032 a3ad861c8ffd185070fbbe520c1f789e 201 Pfam PF01330 RuvA N terminal domain 1 61 4.3E-14 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Tlie_1032 a3ad861c8ffd185070fbbe520c1f789e 201 Gene3D G3DSA:1.10.8.10 141 196 3.1E-5 T 14-10-2018 Tlie_1032 a3ad861c8ffd185070fbbe520c1f789e 201 Pfam PF14520 Helix-hairpin-helix domain 71 128 2.9E-12 T 14-10-2018 Tlie_0976 62325be7ee8bc978e00592e9354d2c4b 457 Gene3D G3DSA:3.40.50.720 8 100 6.4E-15 T 14-10-2018 Tlie_0976 62325be7ee8bc978e00592e9354d2c4b 457 Gene3D G3DSA:3.40.1190.10 102 313 1.8E-52 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tlie_0976 62325be7ee8bc978e00592e9354d2c4b 457 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 14 453 1.8E-119 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tlie_0976 62325be7ee8bc978e00592e9354d2c4b 457 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 115 138 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Tlie_0976 62325be7ee8bc978e00592e9354d2c4b 457 Gene3D G3DSA:3.90.190.20 321 457 4.2E-44 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tlie_0976 62325be7ee8bc978e00592e9354d2c4b 457 SUPERFAMILY SSF53244 316 455 2.52E-40 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tlie_0976 62325be7ee8bc978e00592e9354d2c4b 457 SUPERFAMILY SSF51984 11 100 2.35E-14 T 14-10-2018 Tlie_0976 62325be7ee8bc978e00592e9354d2c4b 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 317 383 9.4E-7 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tlie_0976 62325be7ee8bc978e00592e9354d2c4b 457 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 13 455 31.533 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tlie_0976 62325be7ee8bc978e00592e9354d2c4b 457 SUPERFAMILY SSF53623 106 313 2.22E-46 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tlie_0976 62325be7ee8bc978e00592e9354d2c4b 457 Pfam PF08245 Mur ligase middle domain 117 296 6.7E-34 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tlie_0118 5219c589fb018c930336940af556dc12 351 SMART SM00448 6 130 4.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0118 5219c589fb018c930336940af556dc12 351 Gene3D G3DSA:3.40.50.180 159 350 1.1E-59 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal Tlie_0118 5219c589fb018c930336940af556dc12 351 PIRSF PIRSF000876 3 351 1.2E-122 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Tlie_0118 5219c589fb018c930336940af556dc12 351 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 6 351 36.498 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Tlie_0118 5219c589fb018c930336940af556dc12 351 Pfam PF01339 CheB methylesterase 167 346 1.1E-49 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Tlie_0118 5219c589fb018c930336940af556dc12 351 Gene3D G3DSA:3.40.50.2300 4 138 6.1E-33 T 14-10-2018 Tlie_0118 5219c589fb018c930336940af556dc12 351 SUPERFAMILY SSF52172 4 114 4.7E-29 T 14-10-2018 IPR011006 CheY-like superfamily Tlie_0118 5219c589fb018c930336940af556dc12 351 Pfam PF00072 Response regulator receiver domain 8 115 2.7E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0118 5219c589fb018c930336940af556dc12 351 SUPERFAMILY SSF52738 162 350 1.96E-55 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal Tlie_0196 b4ff1c9539e4a64b478e051c5d9e8b47 557 Gene3D G3DSA:3.20.20.350 4 557 2.9E-283 T 14-10-2018 IPR036999 Diol/glycerol dehydratase, large subunit superfamily GO:0016836|GO:0031419 Tlie_0196 b4ff1c9539e4a64b478e051c5d9e8b47 557 ProDom PD025428 SUBUNIT GLYCEROL DEHYDRATASE LARGE LYASE DHAB ALPHA DIOL B12-DEPENDENT METABOLISM 13 553 0.0 T 14-10-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0016836|GO:0031419 Tlie_0196 b4ff1c9539e4a64b478e051c5d9e8b47 557 SUPERFAMILY SSF51703 5 556 1.73E-269 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Tlie_0196 b4ff1c9539e4a64b478e051c5d9e8b47 557 Pfam PF02286 Dehydratase large subunit 5 555 0.0 T 14-10-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0016836|GO:0031419 Tlie_1025 3095700d99b6b957d61b8af22bd9f960 180 Gene3D G3DSA:3.30.1490.150 109 171 1.8E-36 T 14-10-2018 Tlie_1025 3095700d99b6b957d61b8af22bd9f960 180 Gene3D G3DSA:3.30.700.20 10 178 1.8E-36 T 14-10-2018 IPR027485 AMMECR1, N-terminal Tlie_1025 3095700d99b6b957d61b8af22bd9f960 180 Pfam PF01871 AMMECR1 10 176 5.4E-39 T 14-10-2018 IPR002733 AMMECR1 domain Tlie_1025 3095700d99b6b957d61b8af22bd9f960 180 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 10 174 2.6E-39 T 14-10-2018 IPR027623 AmmeMemoRadiSam system protein A Tlie_1025 3095700d99b6b957d61b8af22bd9f960 180 SUPERFAMILY SSF143447 6 178 8.76E-44 T 14-10-2018 IPR036071 AMMECR1 domain superfamily Tlie_0466 15212e0de8a96a1094e96891d2a43ebf 71 Pfam PF13619 KTSC domain 7 63 1.5E-25 T 14-10-2018 IPR025309 KTSC domain Tlie_1762 d28480714071c4f06d13173d963ce68a 574 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 36 566 1.3E-164 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 Tlie_1762 d28480714071c4f06d13173d963ce68a 574 SUPERFAMILY SSF56235 28 574 2.12E-173 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tlie_1762 d28480714071c4f06d13173d963ce68a 574 Gene3D G3DSA:1.10.246.130 264 389 6.6E-43 T 14-10-2018 Tlie_1762 d28480714071c4f06d13173d963ce68a 574 Gene3D G3DSA:3.60.20.40 390 573 3.1E-60 T 14-10-2018 Tlie_1762 d28480714071c4f06d13173d963ce68a 574 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 390 414 - T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 Tlie_1762 d28480714071c4f06d13173d963ce68a 574 Pfam PF01019 Gamma-glutamyltranspeptidase 51 567 1.9E-167 T 14-10-2018 Tlie_1762 d28480714071c4f06d13173d963ce68a 574 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 278 297 5.5E-80 T 14-10-2018 Tlie_1762 d28480714071c4f06d13173d963ce68a 574 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 58 83 5.5E-80 T 14-10-2018 Tlie_1762 d28480714071c4f06d13173d963ce68a 574 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 445 460 5.5E-80 T 14-10-2018 Tlie_1762 d28480714071c4f06d13173d963ce68a 574 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 390 408 5.5E-80 T 14-10-2018 Tlie_1762 d28480714071c4f06d13173d963ce68a 574 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 470 487 5.5E-80 T 14-10-2018 Tlie_1762 d28480714071c4f06d13173d963ce68a 574 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 131 149 5.5E-80 T 14-10-2018 Tlie_1762 d28480714071c4f06d13173d963ce68a 574 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 414 432 5.5E-80 T 14-10-2018 Tlie_1762 d28480714071c4f06d13173d963ce68a 574 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 248 264 5.5E-80 T 14-10-2018 Tlie_1762 d28480714071c4f06d13173d963ce68a 574 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 149 168 5.5E-80 T 14-10-2018 Tlie_0671 6946d46948fb18820dc937a360313947 41 SUPERFAMILY SSF57840 1 38 1.7E-16 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0671 6946d46948fb18820dc937a360313947 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.457 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0671 6946d46948fb18820dc937a360313947 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0671 6946d46948fb18820dc937a360313947 41 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 38 4.0E-6 T 14-10-2018 Tlie_0671 6946d46948fb18820dc937a360313947 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 4.9E-20 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0671 6946d46948fb18820dc937a360313947 41 Pfam PF00444 Ribosomal protein L36 1 38 1.3E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1569 e6c7e13e8b239faae5b7ebe19eeb37dc 517 Gene3D G3DSA:3.40.1080.10 1 249 3.0E-98 T 14-10-2018 Tlie_1569 e6c7e13e8b239faae5b7ebe19eeb37dc 517 Gene3D G3DSA:3.40.1080.10 250 516 1.9E-121 T 14-10-2018 Tlie_1569 e6c7e13e8b239faae5b7ebe19eeb37dc 517 SUPERFAMILY SSF100950 247 514 5.56E-56 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Tlie_1569 e6c7e13e8b239faae5b7ebe19eeb37dc 517 SUPERFAMILY SSF100950 42 245 9.07E-64 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Tlie_1569 e6c7e13e8b239faae5b7ebe19eeb37dc 517 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 51 514 1.5E-183 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 Tlie_1569 e6c7e13e8b239faae5b7ebe19eeb37dc 517 PIRSF PIRSF009451 1 516 8.5E-210 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 Tlie_1569 e6c7e13e8b239faae5b7ebe19eeb37dc 517 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 28 515 1.8E-198 T 14-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 Tlie_0811 7e1211806ae29ff87e1b1770d558842a 67 Pfam PF01361 Tautomerase enzyme 2 58 4.4E-15 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 Tlie_0811 7e1211806ae29ff87e1b1770d558842a 67 Gene3D G3DSA:3.30.429.10 1 62 3.2E-21 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily Tlie_0811 7e1211806ae29ff87e1b1770d558842a 67 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 61 2.5E-22 T 14-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 Tlie_0811 7e1211806ae29ff87e1b1770d558842a 67 SUPERFAMILY SSF55331 2 61 1.31E-17 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily Tlie_1793 0d4301d9d8fe7846b3f27bd9ce0d6a13 376 Gene3D G3DSA:3.90.1150.10 23 357 8.1E-112 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1793 0d4301d9d8fe7846b3f27bd9ce0d6a13 376 Gene3D G3DSA:3.40.640.10 46 270 8.1E-112 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1793 0d4301d9d8fe7846b3f27bd9ce0d6a13 376 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 7 362 7.8E-103 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Tlie_1793 0d4301d9d8fe7846b3f27bd9ce0d6a13 376 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 222 231 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Tlie_1793 0d4301d9d8fe7846b3f27bd9ce0d6a13 376 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 5 363 52.568 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Tlie_1793 0d4301d9d8fe7846b3f27bd9ce0d6a13 376 Pfam PF00155 Aminotransferase class I and II 33 359 8.0E-62 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tlie_1793 0d4301d9d8fe7846b3f27bd9ce0d6a13 376 SUPERFAMILY SSF53383 6 364 1.46E-81 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1796 4045bf8497b8b9be250d4ca87144540f 306 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 38 301 6.8E-59 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Tlie_1796 4045bf8497b8b9be250d4ca87144540f 306 SUPERFAMILY SSF53850 37 304 1.68E-65 T 14-10-2018 Tlie_1796 4045bf8497b8b9be250d4ca87144540f 306 Gene3D G3DSA:3.40.190.10 40 300 3.7E-86 T 14-10-2018 Tlie_1796 4045bf8497b8b9be250d4ca87144540f 306 Gene3D G3DSA:3.40.190.120 142 245 3.7E-86 T 14-10-2018 Tlie_1090 a5950a7cd838b2171015e6a5789b50b8 285 SUPERFAMILY SSF53807 40 243 7.85E-10 T 14-10-2018 Tlie_1876 d17e9c2b22a270657f4c0ba1b221ac3f 256 Gene3D G3DSA:3.40.50.300 1 255 5.8E-78 T 14-10-2018 Tlie_1876 d17e9c2b22a270657f4c0ba1b221ac3f 256 SUPERFAMILY SSF52540 3 252 1.63E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1876 d17e9c2b22a270657f4c0ba1b221ac3f 256 Pfam PF13614 AAA domain 2 175 5.7E-60 T 14-10-2018 IPR025669 AAA domain Tlie_1876 d17e9c2b22a270657f4c0ba1b221ac3f 256 PIRSF PIRSF009320 82 255 9.6E-7 T 14-10-2018 Tlie_1876 d17e9c2b22a270657f4c0ba1b221ac3f 256 PIRSF PIRSF009320 1 76 1.0E-15 T 14-10-2018 Tlie_0750 aa278d99d80c3e8e097791f20621e44d 189 SUPERFAMILY SSF52788 18 175 1.18E-26 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Tlie_0750 aa278d99d80c3e8e097791f20621e44d 189 Gene3D G3DSA:3.40.50.2300 16 176 1.3E-31 T 14-10-2018 Tlie_0750 aa278d99d80c3e8e097791f20621e44d 189 SMART SM00226 15 175 5.0E-10 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Tlie_0750 aa278d99d80c3e8e097791f20621e44d 189 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 18 165 2.2E-21 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Tlie_1557 503bf5f652ff428b7ab1f5e983ea35fc 297 Pfam PF00005 ABC transporter 47 194 2.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1557 503bf5f652ff428b7ab1f5e983ea35fc 297 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_1557 503bf5f652ff428b7ab1f5e983ea35fc 297 Gene3D G3DSA:3.40.50.300 23 295 5.1E-81 T 14-10-2018 Tlie_1557 503bf5f652ff428b7ab1f5e983ea35fc 297 SMART SM00382 55 244 1.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1557 503bf5f652ff428b7ab1f5e983ea35fc 297 SUPERFAMILY SSF52540 41 269 1.61E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1557 503bf5f652ff428b7ab1f5e983ea35fc 297 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 44 272 3.2E-105 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 Tlie_1304 479a2293d381e55840ea096b91d95ba5 232 Pfam PF01168 Alanine racemase, N-terminal domain 11 231 2.5E-24 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_1304 479a2293d381e55840ea096b91d95ba5 232 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 8 230 28.96 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Tlie_1304 479a2293d381e55840ea096b91d95ba5 232 Gene3D G3DSA:3.20.20.10 3 232 2.5E-82 T 14-10-2018 IPR029066 PLP-binding barrel Tlie_1304 479a2293d381e55840ea096b91d95ba5 232 SUPERFAMILY SSF51419 6 229 5.89E-70 T 14-10-2018 IPR029066 PLP-binding barrel Tlie_1304 479a2293d381e55840ea096b91d95ba5 232 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 6 231 2.6E-58 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Tlie_1304 479a2293d381e55840ea096b91d95ba5 232 PIRSF PIRSF004848 2 232 2.0E-73 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Tlie_1065 a59662c6460acd05373e4dce692428e4 210 SUPERFAMILY SSF52540 17 194 2.1E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1065 a59662c6460acd05373e4dce692428e4 210 Gene3D G3DSA:3.40.50.300 2 203 2.8E-49 T 14-10-2018 Tlie_1065 a59662c6460acd05373e4dce692428e4 210 Pfam PF01926 50S ribosome-binding GTPase 25 144 1.8E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_1065 a59662c6460acd05373e4dce692428e4 210 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 23 165 3.7E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tlie_1065 a59662c6460acd05373e4dce692428e4 210 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 25.438 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Tlie_1065 a59662c6460acd05373e4dce692428e4 210 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 8 188 2.5E-56 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 10 559 8.8E-146 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 Hamap MF_00123 Arginine--tRNA ligase [argS]. 10 559 27.299 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 SUPERFAMILY SSF55190 1 114 1.18E-24 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 Pfam PF00750 tRNA synthetases class I (R) 112 401 7.2E-29 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 Gene3D G3DSA:1.10.730.10 433 559 2.7E-182 T 14-10-2018 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 Gene3D G3DSA:3.30.1360.70 5 111 4.3E-27 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 94 1.5E-23 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 PRINTS PR01038 Arginyl-tRNA synthetase signature 307 328 2.6E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 PRINTS PR01038 Arginyl-tRNA synthetase signature 138 154 2.6E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 PRINTS PR01038 Arginyl-tRNA synthetase signature 162 175 2.6E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 PRINTS PR01038 Arginyl-tRNA synthetase signature 123 138 2.6E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 Pfam PF05746 DALR anticodon binding domain 438 559 3.1E-36 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 Gene3D G3DSA:3.40.50.620 123 432 2.7E-182 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1327 582a51971934ea557c95ec6e17961aed 559 SUPERFAMILY SSF47323 433 559 7.19E-39 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 SUPERFAMILY SSF52374 117 449 9.01E-97 T 14-10-2018 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 SMART SM01016 6 94 9.8E-31 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 SMART SM00836 438 559 7.2E-61 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Tlie_1327 582a51971934ea557c95ec6e17961aed 559 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 133 142 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_1507 4841981acf461690d8d27a267b7a38bc 395 Gene3D G3DSA:3.90.1150.10 259 395 8.8E-52 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1507 4841981acf461690d8d27a267b7a38bc 395 SUPERFAMILY SSF53383 29 394 1.79E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1507 4841981acf461690d8d27a267b7a38bc 395 Gene3D G3DSA:3.40.640.10 9 258 1.6E-75 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1507 4841981acf461690d8d27a267b7a38bc 395 PIRSF PIRSF001434 1 395 5.5E-138 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Tlie_1507 4841981acf461690d8d27a267b7a38bc 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 11 393 9.0E-131 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Tlie_0850 b8ce3e06bc16f2daa8e44754a602b4f6 149 SUPERFAMILY SSF101307 10 141 4.97E-25 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 Tlie_0850 b8ce3e06bc16f2daa8e44754a602b4f6 149 PIRSF PIRSF006162 1 146 4.1E-34 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Tlie_0850 b8ce3e06bc16f2daa8e44754a602b4f6 149 Pfam PF04608 Phosphatidylglycerophosphatase A 9 138 1.1E-34 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 Tlie_1810 c5556f5b67850c1ddeda5a17787ce440 215 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 6 208 5.6E-64 T 14-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like Tlie_1810 c5556f5b67850c1ddeda5a17787ce440 215 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 94 121 0.0012 T 14-10-2018 IPR001451 Hexapeptide repeat Tlie_1810 c5556f5b67850c1ddeda5a17787ce440 215 SUPERFAMILY SSF51161 4 211 1.01E-41 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Tlie_1810 c5556f5b67850c1ddeda5a17787ce440 215 Gene3D G3DSA:3.40.50.20 2 91 1.9E-23 T 14-10-2018 Tlie_1810 c5556f5b67850c1ddeda5a17787ce440 215 Gene3D G3DSA:2.160.10.10 92 215 7.4E-30 T 14-10-2018 Tlie_0889 db0fdfe163199a3cd7f09953993a7feb 438 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 347 419 9.8E-18 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_0889 db0fdfe163199a3cd7f09953993a7feb 438 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 6 418 1.6E-146 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_0889 db0fdfe163199a3cd7f09953993a7feb 438 Pfam PF00591 Glycosyl transferase family, a/b domain 78 306 2.1E-37 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_0889 db0fdfe163199a3cd7f09953993a7feb 438 SUPERFAMILY SSF52418 76 320 3.53E-80 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_0889 db0fdfe163199a3cd7f09953993a7feb 438 SUPERFAMILY SSF54680 336 435 2.62E-22 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_0889 db0fdfe163199a3cd7f09953993a7feb 438 SUPERFAMILY SSF47648 1 70 1.02E-17 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_0889 db0fdfe163199a3cd7f09953993a7feb 438 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_0889 db0fdfe163199a3cd7f09953993a7feb 438 Gene3D G3DSA:3.40.1030.10 78 332 2.6E-128 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_0889 db0fdfe163199a3cd7f09953993a7feb 438 Gene3D G3DSA:1.20.970.10 3 68 5.0E-22 T 14-10-2018 Tlie_0889 db0fdfe163199a3cd7f09953993a7feb 438 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 67 7.4E-17 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_0889 db0fdfe163199a3cd7f09953993a7feb 438 Gene3D G3DSA:3.90.1170.30 333 422 2.6E-128 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_0889 db0fdfe163199a3cd7f09953993a7feb 438 PIRSF PIRSF000478 1 435 4.5E-144 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_0889 db0fdfe163199a3cd7f09953993a7feb 438 SMART SM00941 347 421 1.7E-19 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tlie_0794 81b3b45bed1f963276cf789f0614cd10 188 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 185 23.035 T 14-10-2018 IPR022929 Putative manganese efflux pump MntP Tlie_0794 81b3b45bed1f963276cf789f0614cd10 188 Pfam PF02659 Putative manganese efflux pump 31 182 6.3E-45 T 14-10-2018 IPR003810 Putative manganese efflux pump Tlie_1539 e5a6832e7246c25c0c70a8a796038076 239 SUPERFAMILY SSF55166 21 224 4.32E-46 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Tlie_1539 e5a6832e7246c25c0c70a8a796038076 239 Pfam PF01427 D-ala-D-ala dipeptidase 70 219 8.2E-20 T 14-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 Tlie_1539 e5a6832e7246c25c0c70a8a796038076 239 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 19 225 24.755 T 14-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 Tlie_1539 e5a6832e7246c25c0c70a8a796038076 239 PIRSF PIRSF026671 1 231 3.8E-48 T 14-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 Tlie_1539 e5a6832e7246c25c0c70a8a796038076 239 Gene3D G3DSA:3.30.1380.10 31 221 6.1E-47 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Tlie_1339 19069f2361953e47d569aea2b5d62e1d 230 Pfam PF13353 4Fe-4S single cluster domain 23 137 6.9E-13 T 14-10-2018 Tlie_1339 19069f2361953e47d569aea2b5d62e1d 230 Pfam PF04055 Radical SAM superfamily 26 170 3.6E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_1339 19069f2361953e47d569aea2b5d62e1d 230 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 8 190 1.6E-57 T 14-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein Tlie_1339 19069f2361953e47d569aea2b5d62e1d 230 Gene3D G3DSA:3.20.20.70 7 219 1.4E-32 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1339 19069f2361953e47d569aea2b5d62e1d 230 SUPERFAMILY SSF102114 23 184 3.14E-24 T 14-10-2018 Tlie_1563 494ded0c879e40f8366231aa8e3f48cb 172 SUPERFAMILY SSF52016 4 167 1.69E-41 T 14-10-2018 Tlie_1563 494ded0c879e40f8366231aa8e3f48cb 172 Gene3D G3DSA:3.20.19.10 2 172 6.0E-58 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Tlie_1563 494ded0c879e40f8366231aa8e3f48cb 172 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 8 164 5.4E-55 T 14-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Tlie_1563 494ded0c879e40f8366231aa8e3f48cb 172 Pfam PF00694 Aconitase C-terminal domain 55 105 4.7E-18 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Tlie_1563 494ded0c879e40f8366231aa8e3f48cb 172 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 6 168 35.167 T 14-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 ProSitePatterns PS00636 Nt-dnaJ domain signature. 51 70 - T 14-10-2018 IPR018253 DnaJ domain, conserved site Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 Pfam PF01556 DnaJ C terminal domain 120 337 1.2E-37 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 Gene3D G3DSA:2.60.260.20 258 363 2.9E-29 T 14-10-2018 Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 SUPERFAMILY SSF49493 262 348 6.54E-23 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 SUPERFAMILY SSF46565 6 109 2.09E-37 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 Gene3D G3DSA:2.60.260.20 117 253 1.8E-35 T 14-10-2018 Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 SUPERFAMILY SSF57938 134 213 1.23E-17 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 SUPERFAMILY SSF49493 118 260 3.66E-19 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 Pfam PF00684 DnaJ central domain 147 211 4.2E-13 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 Gene3D G3DSA:2.10.230.10 147 211 1.8E-35 T 14-10-2018 Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 Pfam PF00226 DnaJ domain 9 71 2.1E-30 T 14-10-2018 IPR001623 DnaJ domain Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 PRINTS PR00625 DnaJ domain signature 66 85 3.4E-29 T 14-10-2018 IPR001623 DnaJ domain Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 PRINTS PR00625 DnaJ domain signature 29 44 3.4E-29 T 14-10-2018 IPR001623 DnaJ domain Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 PRINTS PR00625 DnaJ domain signature 46 66 3.4E-29 T 14-10-2018 IPR001623 DnaJ domain Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 PRINTS PR00625 DnaJ domain signature 11 29 3.4E-29 T 14-10-2018 IPR001623 DnaJ domain Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 9 354 7.9E-127 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 6 371 38.842 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 SMART SM00271 8 66 1.9E-35 T 14-10-2018 IPR001623 DnaJ domain Tlie_1349 0562e2d628dcb1b93ad3ee9fa7c29c19 372 Gene3D G3DSA:1.10.287.110 6 115 1.4E-37 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Tlie_1547 1cfc51e1a09102875f4e269ccd4bff09 271 SUPERFAMILY SSF52540 18 241 2.44E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1547 1cfc51e1a09102875f4e269ccd4bff09 271 Gene3D G3DSA:3.40.50.300 12 257 4.3E-66 T 14-10-2018 Tlie_1547 1cfc51e1a09102875f4e269ccd4bff09 271 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_1547 1cfc51e1a09102875f4e269ccd4bff09 271 SMART SM00382 43 231 3.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1547 1cfc51e1a09102875f4e269ccd4bff09 271 Pfam PF00005 ABC transporter 34 183 3.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1813 db459e9e72774243ad05ad4185993137 373 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 366 3.2E-97 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 Tlie_1813 db459e9e72774243ad05ad4185993137 373 Gene3D G3DSA:3.40.50.2000 6 360 3.7E-124 T 14-10-2018 Tlie_1813 db459e9e72774243ad05ad4185993137 373 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 32 363 5.0E-117 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Tlie_1813 db459e9e72774243ad05ad4185993137 373 Gene3D G3DSA:3.40.50.2000 194 350 3.7E-124 T 14-10-2018 Tlie_1813 db459e9e72774243ad05ad4185993137 373 SUPERFAMILY SSF53756 1 365 4.33E-109 T 14-10-2018 Tlie_0535 99037a59fd857ac7fd3d6508ff9e9cb3 468 SMART SM01086 360 454 9.7E-21 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Tlie_0535 99037a59fd857ac7fd3d6508ff9e9cb3 468 Pfam PF07724 AAA domain (Cdc48 subfamily) 195 353 1.1E-39 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tlie_0535 99037a59fd857ac7fd3d6508ff9e9cb3 468 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 360 431 2.8E-5 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Tlie_0535 99037a59fd857ac7fd3d6508ff9e9cb3 468 Gene3D G3DSA:1.10.8.60 360 465 7.5E-40 T 14-10-2018 Tlie_0535 99037a59fd857ac7fd3d6508ff9e9cb3 468 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 6 468 42.166 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Tlie_0535 99037a59fd857ac7fd3d6508ff9e9cb3 468 SUPERFAMILY SSF52540 9 462 9.58E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0535 99037a59fd857ac7fd3d6508ff9e9cb3 468 SMART SM00382 54 357 2.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0535 99037a59fd857ac7fd3d6508ff9e9cb3 468 Pfam PF07728 AAA domain (dynein-related subfamily) 57 94 4.2E-6 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Tlie_0535 99037a59fd857ac7fd3d6508ff9e9cb3 468 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 9 468 5.9E-188 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Tlie_0656 4ae0451b05d746d237bf8a52ac6f2e2d 122 SUPERFAMILY SSF50193 1 122 1.57E-53 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Tlie_0656 4ae0451b05d746d237bf8a52ac6f2e2d 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.3E-58 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Tlie_0656 4ae0451b05d746d237bf8a52ac6f2e2d 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.938 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Tlie_0656 4ae0451b05d746d237bf8a52ac6f2e2d 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0656 4ae0451b05d746d237bf8a52ac6f2e2d 122 SMART SM01374 1 122 1.8E-87 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Tlie_0656 4ae0451b05d746d237bf8a52ac6f2e2d 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.9E-57 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Tlie_0656 4ae0451b05d746d237bf8a52ac6f2e2d 122 Gene3D G3DSA:2.40.150.20 1 122 3.6E-56 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Tlie_1056 46f2608c9ba35246fb2bbb0394594cd3 385 SUPERFAMILY SSF53756 4 377 4.32E-123 T 14-10-2018 Tlie_1056 46f2608c9ba35246fb2bbb0394594cd3 385 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 28 374 6.7E-109 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Tlie_1056 46f2608c9ba35246fb2bbb0394594cd3 385 Gene3D G3DSA:3.40.50.2000 194 361 2.4E-133 T 14-10-2018 Tlie_1056 46f2608c9ba35246fb2bbb0394594cd3 385 Gene3D G3DSA:3.40.50.2000 7 371 2.4E-133 T 14-10-2018 Tlie_1056 46f2608c9ba35246fb2bbb0394594cd3 385 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 6 376 1.2E-131 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 Tlie_1103 5d495e32d85374a499a8484d53eae03c 316 SUPERFAMILY SSF51412 6 309 1.37E-79 T 14-10-2018 Tlie_1103 5d495e32d85374a499a8484d53eae03c 316 TIGRFAM TIGR03151 enACPred_II: putative enoyl-[acyl-carrier-protein] reductase II 4 308 3.0E-143 T 14-10-2018 IPR017569 Enoyl-(acyl-carrier-protein) reductase II, putative Tlie_1103 5d495e32d85374a499a8484d53eae03c 316 Gene3D G3DSA:3.20.20.70 3 314 2.1E-116 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1103 5d495e32d85374a499a8484d53eae03c 316 Pfam PF03060 Nitronate monooxygenase 80 301 1.0E-58 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Tlie_0509 ec2fe4b12367885e47df1d3db54eae64 107 ProDom PD050957 AF2391 PREDICTED 1 33 2.0E-7 T 14-10-2018 Tlie_0509 ec2fe4b12367885e47df1d3db54eae64 107 Pfam PF17253 Family of unknown function (DUF5320) 1 105 2.7E-33 T 14-10-2018 IPR035205 Protein of unknown function DUF5320 Tlie_1525 ff157d83688ee4665dc94a081029263e 258 Pfam PF01478 Type IV leader peptidase family 107 209 1.8E-7 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Tlie_1525 ff157d83688ee4665dc94a081029263e 258 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 12 95 1.1E-25 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal Tlie_1160 eb1624bd2616721fc20ab10fc63045eb 414 SUPERFAMILY SSF53383 12 412 9.25E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1160 eb1624bd2616721fc20ab10fc63045eb 414 Gene3D G3DSA:3.40.640.10 38 291 5.8E-126 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1160 eb1624bd2616721fc20ab10fc63045eb 414 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 14 406 1.2E-122 T 14-10-2018 IPR011340 Cysteine desulfurase-related Tlie_1160 eb1624bd2616721fc20ab10fc63045eb 414 Pfam PF00266 Aminotransferase class-V 31 402 8.3E-72 T 14-10-2018 IPR000192 Aminotransferase class V domain Tlie_1160 eb1624bd2616721fc20ab10fc63045eb 414 Gene3D G3DSA:3.90.1150.10 29 406 5.8E-126 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1043 6ee07bf039e05aceb36039b2638f2970 140 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 8 117 1.9E-44 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Tlie_1043 6ee07bf039e05aceb36039b2638f2970 140 Gene3D G3DSA:3.30.360.110 6 66 1.4E-23 T 14-10-2018 Tlie_1043 6ee07bf039e05aceb36039b2638f2970 140 Pfam PF02675 S-adenosylmethionine decarboxylase 11 117 4.1E-42 T 14-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Tlie_1043 6ee07bf039e05aceb36039b2638f2970 140 Gene3D G3DSA:3.30.160.750 67 130 1.8E-25 T 14-10-2018 Tlie_1043 6ee07bf039e05aceb36039b2638f2970 140 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 5 121 31.912 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Tlie_1043 6ee07bf039e05aceb36039b2638f2970 140 SUPERFAMILY SSF56276 8 119 6.08E-45 T 14-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 Tlie_0130 c3f8fc23220ce78e900497b0dd910aa2 995 SUPERFAMILY SSF64518 663 995 2.62E-40 T 14-10-2018 Tlie_0130 c3f8fc23220ce78e900497b0dd910aa2 995 Gene3D G3DSA:3.30.70.2120 284 407 9.2E-51 T 14-10-2018 Tlie_0130 c3f8fc23220ce78e900497b0dd910aa2 995 Gene3D G3DSA:1.20.1330.10 132 421 9.2E-51 T 14-10-2018 Tlie_0130 c3f8fc23220ce78e900497b0dd910aa2 995 Gene3D G3DSA:1.20.1330.10 825 945 4.2E-22 T 14-10-2018 Tlie_0130 c3f8fc23220ce78e900497b0dd910aa2 995 Gene3D G3DSA:1.10.8.410 946 995 2.6E-27 T 14-10-2018 Tlie_0130 c3f8fc23220ce78e900497b0dd910aa2 995 Pfam PF00669 Bacterial flagellin N-terminal helical region 93 230 6.6E-45 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Tlie_0130 c3f8fc23220ce78e900497b0dd910aa2 995 Pfam PF00700 Bacterial flagellin C-terminal helical region 909 994 1.5E-30 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Tlie_0130 c3f8fc23220ce78e900497b0dd910aa2 995 PRINTS PR00207 Flagellin signature 125 142 2.0E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Tlie_0130 c3f8fc23220ce78e900497b0dd910aa2 995 PRINTS PR00207 Flagellin signature 164 183 2.0E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Tlie_0130 c3f8fc23220ce78e900497b0dd910aa2 995 PRINTS PR00207 Flagellin signature 199 222 2.0E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Tlie_0130 c3f8fc23220ce78e900497b0dd910aa2 995 SUPERFAMILY SSF64518 91 446 4.18E-58 T 14-10-2018 Tlie_0158 62134764109e47544505372d37792853 215 SUPERFAMILY SSF48008 72 211 1.23E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0158 62134764109e47544505372d37792853 215 Gene3D G3DSA:1.20.120.530 72 215 1.9E-31 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0158 62134764109e47544505372d37792853 215 Pfam PF07729 FCD domain 78 205 1.8E-24 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_0158 62134764109e47544505372d37792853 215 SMART SM00345 9 67 7.1E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0158 62134764109e47544505372d37792853 215 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 67 1.5E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0158 62134764109e47544505372d37792853 215 SMART SM00895 77 206 2.9E-23 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_0158 62134764109e47544505372d37792853 215 SUPERFAMILY SSF46785 7 71 1.63E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_0158 62134764109e47544505372d37792853 215 Gene3D G3DSA:1.10.10.10 2 68 2.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0559 f1b2c4cfd7d447fb846b7e5aa58b324c 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 12 273 51.555 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tlie_0559 f1b2c4cfd7d447fb846b7e5aa58b324c 284 Pfam PF00793 DAHP synthetase I family 13 271 6.4E-73 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tlie_0559 f1b2c4cfd7d447fb846b7e5aa58b324c 284 Gene3D G3DSA:3.20.20.70 6 278 3.0E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0559 f1b2c4cfd7d447fb846b7e5aa58b324c 284 SUPERFAMILY SSF51569 5 272 7.69E-107 T 14-10-2018 Tlie_0559 f1b2c4cfd7d447fb846b7e5aa58b324c 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 17 271 1.4E-122 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 189 202 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 SUPERFAMILY SSF100920 378 534 1.15E-63 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 Gene3D G3DSA:2.60.34.10 371 500 4.8E-61 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 PRINTS PR00301 70kDa heat shock protein signature 359 379 6.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 PRINTS PR00301 70kDa heat shock protein signature 463 479 6.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 PRINTS PR00301 70kDa heat shock protein signature 327 343 6.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 PRINTS PR00301 70kDa heat shock protein signature 195 205 6.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 PRINTS PR00301 70kDa heat shock protein signature 382 401 6.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 PRINTS PR00301 70kDa heat shock protein signature 136 156 6.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.7E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 330 344 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 4 595 3.3E-301 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 Gene3D G3DSA:3.90.640.10 221 308 1.8E-157 T 14-10-2018 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 SUPERFAMILY SSF53067 184 375 3.7E-67 T 14-10-2018 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 SUPERFAMILY SSF100934 528 593 7.45E-6 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 627 37.044 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 SUPERFAMILY SSF53067 4 182 5.18E-66 T 14-10-2018 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 Gene3D G3DSA:1.20.1270.10 501 600 1.3E-22 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 Gene3D G3DSA:3.30.420.40 5 370 1.8E-157 T 14-10-2018 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 Gene3D G3DSA:3.30.30.30 67 116 1.8E-157 T 14-10-2018 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 Gene3D G3DSA:3.30.420.40 182 356 1.8E-157 T 14-10-2018 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 Pfam PF00012 Hsp70 protein 5 592 3.6E-258 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tlie_1601 cf177109df83020afe7163cc4060f1bf 627 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Tlie_1059 d48c27309dd97ae3abedf0ba1b16b768 317 SMART SM00382 43 212 1.1E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1059 d48c27309dd97ae3abedf0ba1b16b768 317 Pfam PF03308 ArgK protein 16 275 1.1E-99 T 14-10-2018 Tlie_1059 d48c27309dd97ae3abedf0ba1b16b768 317 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 11 306 1.8E-110 T 14-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Tlie_1059 d48c27309dd97ae3abedf0ba1b16b768 317 Gene3D G3DSA:3.40.50.300 39 245 3.0E-88 T 14-10-2018 Tlie_1059 d48c27309dd97ae3abedf0ba1b16b768 317 SUPERFAMILY SSF52540 2 282 1.66E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0359 a0ec9d6da9309d2208814845b80dabc2 57 Gene3D G3DSA:3.30.70.20 1 30 1.1E-7 T 14-10-2018 Tlie_0359 a0ec9d6da9309d2208814845b80dabc2 57 Gene3D G3DSA:3.30.70.20 31 57 5.1E-9 T 14-10-2018 Tlie_0359 a0ec9d6da9309d2208814845b80dabc2 57 PRINTS PR00352 3Fe-4S ferredoxin signature 43 55 8.6E-5 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Tlie_0359 a0ec9d6da9309d2208814845b80dabc2 57 PRINTS PR00352 3Fe-4S ferredoxin signature 6 17 8.6E-5 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Tlie_0359 a0ec9d6da9309d2208814845b80dabc2 57 PRINTS PR00352 3Fe-4S ferredoxin signature 17 27 8.6E-5 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Tlie_0359 a0ec9d6da9309d2208814845b80dabc2 57 Pfam PF13237 4Fe-4S dicluster domain 3 51 5.8E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_0359 a0ec9d6da9309d2208814845b80dabc2 57 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_0359 a0ec9d6da9309d2208814845b80dabc2 57 SUPERFAMILY SSF54862 3 56 3.31E-20 T 14-10-2018 Tlie_0256 5553d9b828c724e1eb41d2bc434f0883 440 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 123 431 1.1E-75 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 Tlie_0256 5553d9b828c724e1eb41d2bc434f0883 440 SUPERFAMILY SSF51735 3 143 1.08E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0256 5553d9b828c724e1eb41d2bc434f0883 440 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 118 4.4E-19 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 Tlie_0256 5553d9b828c724e1eb41d2bc434f0883 440 Gene3D G3DSA:1.10.1870.10 249 341 8.9E-131 T 14-10-2018 Tlie_0256 5553d9b828c724e1eb41d2bc434f0883 440 SUPERFAMILY SSF55347 124 379 2.68E-55 T 14-10-2018 Tlie_0256 5553d9b828c724e1eb41d2bc434f0883 440 Gene3D G3DSA:3.30.360.10 125 381 8.9E-131 T 14-10-2018 Tlie_0256 5553d9b828c724e1eb41d2bc434f0883 440 Gene3D G3DSA:3.40.50.720 3 427 8.9E-131 T 14-10-2018 Tlie_1750 62eb149012fe611a326368e4ee27456a 250 SUPERFAMILY SSF52540 2 215 1.17E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1750 62eb149012fe611a326368e4ee27456a 250 Pfam PF00005 ABC transporter 18 164 2.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1750 62eb149012fe611a326368e4ee27456a 250 Gene3D G3DSA:3.40.50.300 1 243 1.5E-66 T 14-10-2018 Tlie_1750 62eb149012fe611a326368e4ee27456a 250 SMART SM00382 27 213 2.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1750 62eb149012fe611a326368e4ee27456a 250 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_1115 44d6896cb189dcf20a350014108baa9d 95 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 71 82 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_1115 44d6896cb189dcf20a350014108baa9d 95 TIGRFAM TIGR02179 PorD_KorD: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 19 91 1.3E-30 T 14-10-2018 IPR011898 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0051539 Tlie_1115 44d6896cb189dcf20a350014108baa9d 95 SUPERFAMILY SSF54862 15 92 3.02E-21 T 14-10-2018 Tlie_1115 44d6896cb189dcf20a350014108baa9d 95 Gene3D G3DSA:3.30.70.20 7 94 3.3E-17 T 14-10-2018 Tlie_1115 44d6896cb189dcf20a350014108baa9d 95 Pfam PF14697 4Fe-4S dicluster domain 36 88 1.5E-11 T 14-10-2018 Tlie_0434 3381962f8f853a578524ac85ffb5dea9 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 3.3E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tlie_0434 3381962f8f853a578524ac85ffb5dea9 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 3.3E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tlie_0434 3381962f8f853a578524ac85ffb5dea9 203 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 52 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Tlie_0434 3381962f8f853a578524ac85ffb5dea9 203 Gene3D G3DSA:1.10.357.10 2 194 1.4E-28 T 14-10-2018 Tlie_0434 3381962f8f853a578524ac85ffb5dea9 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 4.1E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tlie_0434 3381962f8f853a578524ac85ffb5dea9 203 SUPERFAMILY SSF46689 4 72 6.67E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 SUPERFAMILY SSF82693 138 322 2.88E-16 T 14-10-2018 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 Gene3D G3DSA:3.30.70.1320 134 324 7.3E-292 T 14-10-2018 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 SUPERFAMILY SSF82693 556 647 1.18E-12 T 14-10-2018 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 Gene3D G3DSA:3.30.70.1440 652 845 7.3E-292 T 14-10-2018 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 SUPERFAMILY SSF82714 181 263 5.49E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 3.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 3.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 3.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 3.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 3.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 3.1E-48 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 Gene3D G3DSA:3.30.70.1430 40 796 7.3E-292 T 14-10-2018 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 Gene3D G3DSA:3.30.2090.10 701 788 7.3E-292 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 SUPERFAMILY SSF82693 40 134 5.93E-22 T 14-10-2018 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 Gene3D G3DSA:1.20.1640.10 10 502 7.3E-292 T 14-10-2018 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 Gene3D G3DSA:3.30.70.1430 557 651 7.3E-292 T 14-10-2018 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 Pfam PF00873 AcrB/AcrD/AcrF family 4 1005 9.1E-235 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 SUPERFAMILY SSF82866 784 1008 8.24E-46 T 14-10-2018 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 SUPERFAMILY SSF82714 703 786 2.88E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 Gene3D G3DSA:3.30.2090.10 177 267 7.3E-292 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 SUPERFAMILY SSF82866 289 487 2.49E-41 T 14-10-2018 Tlie_0807 0da06fc2b24674806f0b35fddc607104 1018 Gene3D G3DSA:1.20.1640.10 503 1002 7.3E-292 T 14-10-2018 Tlie_0190 15ad5cd0f2c2c3cc5cde76be6acadd35 405 Pfam PF10114 Sensory domain found in PocR 13 175 3.1E-41 T 14-10-2018 IPR018771 PocR domain Tlie_0190 15ad5cd0f2c2c3cc5cde76be6acadd35 405 Gene3D G3DSA:3.30.565.10 274 402 2.0E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0190 15ad5cd0f2c2c3cc5cde76be6acadd35 405 SUPERFAMILY SSF55874 268 398 2.88E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_0190 15ad5cd0f2c2c3cc5cde76be6acadd35 405 Pfam PF06580 Histidine kinase 209 290 6.5E-22 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Tlie_1247 c42225cff55240c2826149c04e290d8c 165 Gene3D G3DSA:3.40.30.10 77 159 2.0E-29 T 14-10-2018 Tlie_1247 c42225cff55240c2826149c04e290d8c 165 SUPERFAMILY SSF52833 9 161 8.83E-52 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tlie_1247 c42225cff55240c2826149c04e290d8c 165 Gene3D G3DSA:1.10.10.1590 7 76 1.4E-18 T 14-10-2018 Tlie_1247 c42225cff55240c2826149c04e290d8c 165 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 117 135 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1247 c42225cff55240c2826149c04e290d8c 165 PIRSF PIRSF000216 1 165 1.8E-57 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1247 c42225cff55240c2826149c04e290d8c 165 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 17 159 2.1E-51 T 14-10-2018 Tlie_1252 6f41b9df9b0946694a009a3a6765b2fa 490 SUPERFAMILY SSF75304 3 480 5.49E-154 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Tlie_1252 6f41b9df9b0946694a009a3a6765b2fa 490 Pfam PF01425 Amidase 24 470 1.5E-149 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Tlie_1252 6f41b9df9b0946694a009a3a6765b2fa 490 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 481 85.274 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Tlie_1252 6f41b9df9b0946694a009a3a6765b2fa 490 Gene3D G3DSA:3.90.1300.10 3 484 2.0E-180 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Tlie_1252 6f41b9df9b0946694a009a3a6765b2fa 490 ProSitePatterns PS00571 Amidases signature. 153 184 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Tlie_1252 6f41b9df9b0946694a009a3a6765b2fa 490 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 479 3.9E-178 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Tlie_1351 e27edf9135a803519ca959eccd145276 214 Pfam PF01025 GrpE 45 202 8.6E-43 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tlie_1351 e27edf9135a803519ca959eccd145276 214 PRINTS PR00773 GrpE protein signature 101 116 1.3E-23 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tlie_1351 e27edf9135a803519ca959eccd145276 214 PRINTS PR00773 GrpE protein signature 73 89 1.3E-23 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tlie_1351 e27edf9135a803519ca959eccd145276 214 PRINTS PR00773 GrpE protein signature 154 169 1.3E-23 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tlie_1351 e27edf9135a803519ca959eccd145276 214 PRINTS PR00773 GrpE protein signature 181 200 1.3E-23 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tlie_1351 e27edf9135a803519ca959eccd145276 214 SUPERFAMILY SSF51064 147 203 5.23E-14 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Tlie_1351 e27edf9135a803519ca959eccd145276 214 SUPERFAMILY SSF58014 50 146 5.1E-23 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Tlie_1351 e27edf9135a803519ca959eccd145276 214 Gene3D G3DSA:3.90.20.20 33 145 1.0E-26 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Tlie_1351 e27edf9135a803519ca959eccd145276 214 Gene3D G3DSA:2.30.22.10 146 211 1.1E-19 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Tlie_1351 e27edf9135a803519ca959eccd145276 214 Hamap MF_01151 Protein GrpE [grpE]. 11 202 18.678 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tlie_1351 e27edf9135a803519ca959eccd145276 214 ProSitePatterns PS01071 grpE protein signature. 157 200 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tlie_0332 c8ef5f8cc31ff339221d42ca7c4522d4 312 Pfam PF00892 EamA-like transporter family 168 301 9.0E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tlie_0332 c8ef5f8cc31ff339221d42ca7c4522d4 312 Pfam PF00892 EamA-like transporter family 32 158 5.0E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tlie_0332 c8ef5f8cc31ff339221d42ca7c4522d4 312 SUPERFAMILY SSF103481 63 162 1.44E-7 T 14-10-2018 Tlie_0332 c8ef5f8cc31ff339221d42ca7c4522d4 312 SUPERFAMILY SSF103481 203 302 4.71E-12 T 14-10-2018 Tlie_0968 3f2bdb9f27b6e2d426c9721c9106f44c 208 Pfam PF01813 ATP synthase subunit D 13 203 5.5E-58 T 14-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0968 3f2bdb9f27b6e2d426c9721c9106f44c 208 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 6 203 1.6E-48 T 14-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0968 3f2bdb9f27b6e2d426c9721c9106f44c 208 Hamap MF_00271 V-type ATP synthase subunit D [atpD]. 4 208 20.627 T 14-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0665 f8089f31ce3764e996d9bbe98d8cbf4f 148 Gene3D G3DSA:3.100.10.10 70 148 2.3E-20 T 14-10-2018 Tlie_0665 f8089f31ce3764e996d9bbe98d8cbf4f 148 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 145 5.6E-50 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0665 f8089f31ce3764e996d9bbe98d8cbf4f 148 ProSitePatterns PS00475 Ribosomal protein L15 signature. 112 142 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0665 f8089f31ce3764e996d9bbe98d8cbf4f 148 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 148 21.898 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Tlie_0665 f8089f31ce3764e996d9bbe98d8cbf4f 148 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 146 1.4E-38 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P Tlie_0665 f8089f31ce3764e996d9bbe98d8cbf4f 148 SUPERFAMILY SSF52080 4 147 3.66E-46 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Tlie_1417 64a9ba71763b52089fe7217facfc519d 256 Pfam PF00849 RNA pseudouridylate synthase 24 180 1.2E-34 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_1417 64a9ba71763b52089fe7217facfc519d 256 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_1417 64a9ba71763b52089fe7217facfc519d 256 Gene3D G3DSA:3.30.2350.10 15 247 1.5E-59 T 14-10-2018 Tlie_1417 64a9ba71763b52089fe7217facfc519d 256 SUPERFAMILY SSF55120 11 248 1.23E-59 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_1111 e7267b00bcd9da11e92474196c495d68 167 Pfam PF01467 Cytidylyltransferase-like 6 131 7.2E-20 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Tlie_1111 e7267b00bcd9da11e92474196c495d68 167 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 63 2.7E-16 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Tlie_1111 e7267b00bcd9da11e92474196c495d68 167 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 34.798 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tlie_1111 e7267b00bcd9da11e92474196c495d68 167 Gene3D G3DSA:3.40.50.620 2 161 8.0E-56 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1111 e7267b00bcd9da11e92474196c495d68 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 2.5E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tlie_1111 e7267b00bcd9da11e92474196c495d68 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 2.5E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tlie_1111 e7267b00bcd9da11e92474196c495d68 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 2.5E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tlie_1111 e7267b00bcd9da11e92474196c495d68 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 2.5E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tlie_1111 e7267b00bcd9da11e92474196c495d68 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 2.5E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tlie_1111 e7267b00bcd9da11e92474196c495d68 167 SUPERFAMILY SSF52374 4 157 7.6E-45 T 14-10-2018 Tlie_1111 e7267b00bcd9da11e92474196c495d68 167 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 76 4.0E-4 T 14-10-2018 Tlie_1111 e7267b00bcd9da11e92474196c495d68 167 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 158 2.7E-61 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tlie_1004 ab149ccdd78c072e87db99f2e547d2ab 111 Gene3D G3DSA:3.30.70.1490 1 108 1.4E-25 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily Tlie_1004 ab149ccdd78c072e87db99f2e547d2ab 111 Pfam PF04327 Cysteine protease Prp 1 103 1.7E-24 T 14-10-2018 IPR007422 Cysteine protease Prp Tlie_1004 ab149ccdd78c072e87db99f2e547d2ab 111 SUPERFAMILY SSF118010 1 106 4.58E-25 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily Tlie_1560 edb3d065160e21ed8ca8e82f91cab691 229 Gene3D G3DSA:1.20.120.530 92 229 5.6E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_1560 edb3d065160e21ed8ca8e82f91cab691 229 Gene3D G3DSA:1.10.10.10 5 81 8.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1560 edb3d065160e21ed8ca8e82f91cab691 229 SUPERFAMILY SSF48008 93 226 1.57E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_1560 edb3d065160e21ed8ca8e82f91cab691 229 SMART SM00895 96 218 6.6E-17 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_1560 edb3d065160e21ed8ca8e82f91cab691 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.8E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1560 edb3d065160e21ed8ca8e82f91cab691 229 SUPERFAMILY SSF46785 6 78 6.33E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1560 edb3d065160e21ed8ca8e82f91cab691 229 Pfam PF07729 FCD domain 96 217 2.0E-17 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_1560 edb3d065160e21ed8ca8e82f91cab691 229 SMART SM00345 15 74 8.9E-23 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1560 edb3d065160e21ed8ca8e82f91cab691 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 6.3E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_1560 edb3d065160e21ed8ca8e82f91cab691 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 6.3E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0022 a1130b8009b0c7c5bacd6b9cb2707529 386 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 120 2.3E-17 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 Tlie_0022 a1130b8009b0c7c5bacd6b9cb2707529 386 Gene3D G3DSA:3.40.50.720 3 377 1.1E-111 T 14-10-2018 Tlie_0022 a1130b8009b0c7c5bacd6b9cb2707529 386 SUPERFAMILY SSF51735 1 171 1.76E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0022 a1130b8009b0c7c5bacd6b9cb2707529 386 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 125 377 6.0E-42 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 Tlie_0022 a1130b8009b0c7c5bacd6b9cb2707529 386 Gene3D G3DSA:3.30.360.10 126 326 1.1E-111 T 14-10-2018 Tlie_0022 a1130b8009b0c7c5bacd6b9cb2707529 386 SUPERFAMILY SSF55347 127 313 5.43E-30 T 14-10-2018 Tlie_1347 d32bf2142ce2772889ef0a7a6e1ea40d 237 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 12 235 4.4E-37 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Tlie_1347 d32bf2142ce2772889ef0a7a6e1ea40d 237 Pfam PF04452 RNA methyltransferase 19 231 3.7E-46 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Tlie_1347 d32bf2142ce2772889ef0a7a6e1ea40d 237 Gene3D G3DSA:3.40.1280.10 4 236 2.0E-52 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tlie_1347 d32bf2142ce2772889ef0a7a6e1ea40d 237 SUPERFAMILY SSF75217 70 235 3.92E-37 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Tlie_1347 d32bf2142ce2772889ef0a7a6e1ea40d 237 PIRSF PIRSF015601 2 236 9.2E-43 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Tlie_0867 9763a3a611695eeb083061b3540d4fe5 151 Gene3D G3DSA:1.10.940.10 7 145 1.1E-38 T 14-10-2018 IPR035926 NusB-like superfamily Tlie_0867 9763a3a611695eeb083061b3540d4fe5 151 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 140 20.803 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 Tlie_0867 9763a3a611695eeb083061b3540d4fe5 151 Pfam PF01029 NusB family 11 137 1.3E-30 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Tlie_0867 9763a3a611695eeb083061b3540d4fe5 151 SUPERFAMILY SSF48013 9 141 1.7E-33 T 14-10-2018 IPR035926 NusB-like superfamily Tlie_0867 9763a3a611695eeb083061b3540d4fe5 151 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 9 138 1.7E-35 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 Tlie_1299 96f99a2c508bf7d149a6647ada2d6eab 260 PIRSF PIRSF004789 1 260 5.1E-96 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Tlie_1299 96f99a2c508bf7d149a6647ada2d6eab 260 Gene3D G3DSA:3.60.21.10 1 260 1.0E-108 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Tlie_1299 96f99a2c508bf7d149a6647ada2d6eab 260 Pfam PF13277 YmdB-like protein 4 254 3.2E-104 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Tlie_1299 96f99a2c508bf7d149a6647ada2d6eab 260 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 256 1.2E-85 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Tlie_1299 96f99a2c508bf7d149a6647ada2d6eab 260 SUPERFAMILY SSF56300 1 255 3.79E-84 T 14-10-2018 Tlie_0073 500f345496ad2df29d9d8ab83f8a5a53 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 69 85 4.2E-6 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tlie_0073 500f345496ad2df29d9d8ab83f8a5a53 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 35 51 4.2E-6 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tlie_0073 500f345496ad2df29d9d8ab83f8a5a53 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 90 103 4.2E-6 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tlie_0073 500f345496ad2df29d9d8ab83f8a5a53 105 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 2 105 15.014 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tlie_0073 500f345496ad2df29d9d8ab83f8a5a53 105 Pfam PF02049 Flagellar hook-basal body complex protein FliE 25 105 8.3E-20 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tlie_1817 64ae3c770db549f5f58b108d50301c86 261 SUPERFAMILY SSF53756 17 254 1.48E-5 T 14-10-2018 Tlie_0682 d2cd721da7309f6708487941dce8be7c 144 Pfam PF03692 Putative zinc- or iron-chelating domain 18 119 2.5E-17 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Tlie_1044 0e2e9be3a5675a62ebefd35d28a9a960 288 Pfam PF00491 Arginase family 16 279 1.2E-74 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Tlie_1044 0e2e9be3a5675a62ebefd35d28a9a960 288 TIGRFAM TIGR01230 agmatinase: agmatinase 3 280 7.8E-83 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 Tlie_1044 0e2e9be3a5675a62ebefd35d28a9a960 288 Gene3D G3DSA:3.40.800.10 9 286 1.0E-85 T 14-10-2018 Tlie_1044 0e2e9be3a5675a62ebefd35d28a9a960 288 ProSitePatterns PS01053 Arginase family signature. 209 230 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Tlie_1044 0e2e9be3a5675a62ebefd35d28a9a960 288 PIRSF PIRSF036979 2 285 8.2E-85 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Tlie_1044 0e2e9be3a5675a62ebefd35d28a9a960 288 SUPERFAMILY SSF52768 11 282 9.54E-79 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily Tlie_1528 cede264f69b9ad72398369ef7c798ab0 296 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 24 226 7.2E-52 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT Tlie_1528 cede264f69b9ad72398369ef7c798ab0 296 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 232 286 3.4E-19 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 Tlie_1528 cede264f69b9ad72398369ef7c798ab0 296 Gene3D G3DSA:3.30.70.120 204 279 1.2E-23 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tlie_1528 cede264f69b9ad72398369ef7c798ab0 296 PIRSF PIRSF006483 5 293 1.8E-73 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT Tlie_0652 4da87b7b2a9cfa4606b9e4e6208cfd4c 223 Gene3D G3DSA:3.30.300.20 17 107 3.3E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Tlie_0652 4da87b7b2a9cfa4606b9e4e6208cfd4c 223 SUPERFAMILY SSF54814 2 106 4.71E-37 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Tlie_0652 4da87b7b2a9cfa4606b9e4e6208cfd4c 223 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.2E-91 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Tlie_0652 4da87b7b2a9cfa4606b9e4e6208cfd4c 223 Gene3D G3DSA:3.30.1140.32 108 208 1.2E-40 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0652 4da87b7b2a9cfa4606b9e4e6208cfd4c 223 SMART SM00322 60 125 5.5E-7 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Tlie_0652 4da87b7b2a9cfa4606b9e4e6208cfd4c 223 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0652 4da87b7b2a9cfa4606b9e4e6208cfd4c 223 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 37.472 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Tlie_0652 4da87b7b2a9cfa4606b9e4e6208cfd4c 223 Pfam PF07650 KH domain 38 110 3.8E-17 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0652 4da87b7b2a9cfa4606b9e4e6208cfd4c 223 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.2E-38 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0652 4da87b7b2a9cfa4606b9e4e6208cfd4c 223 SUPERFAMILY SSF54821 107 205 3.4E-38 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_1473 ebe12451313494eba5f4ef884680ee95 353 Gene3D G3DSA:3.30.70.360 158 265 5.9E-79 T 14-10-2018 Tlie_1473 ebe12451313494eba5f4ef884680ee95 353 TIGRFAM TIGR01902 dapE-lys-deAc: N-acetyl-ornithine/N-acetyl-lysine deacetylase 10 349 1.0E-73 T 14-10-2018 IPR010175 [LysW]-lysine/[LysW]-ornithine hydrolase GO:0005737|GO:0008270|GO:0009085|GO:0016811|GO:0050897 Tlie_1473 ebe12451313494eba5f4ef884680ee95 353 Gene3D G3DSA:3.40.630.10 13 341 5.9E-79 T 14-10-2018 Tlie_1473 ebe12451313494eba5f4ef884680ee95 353 Pfam PF01546 Peptidase family M20/M25/M40 65 344 2.5E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tlie_1473 ebe12451313494eba5f4ef884680ee95 353 SUPERFAMILY SSF53187 4 350 1.15E-40 T 14-10-2018 Tlie_0556 676b0be1d92560a9fc4ae230891cfc0d 586 Pfam PF00664 ABC transporter transmembrane region 26 294 8.0E-57 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Tlie_0556 676b0be1d92560a9fc4ae230891cfc0d 586 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0556 676b0be1d92560a9fc4ae230891cfc0d 586 Gene3D G3DSA:3.40.50.300 337 584 2.7E-92 T 14-10-2018 Tlie_0556 676b0be1d92560a9fc4ae230891cfc0d 586 SUPERFAMILY SSF52540 330 577 3.48E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0556 676b0be1d92560a9fc4ae230891cfc0d 586 Pfam PF00005 ABC transporter 357 506 9.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0556 676b0be1d92560a9fc4ae230891cfc0d 586 SUPERFAMILY SSF90123 12 327 1.44E-83 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Tlie_0556 676b0be1d92560a9fc4ae230891cfc0d 586 Gene3D G3DSA:1.20.1560.10 2 328 4.1E-93 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Tlie_0556 676b0be1d92560a9fc4ae230891cfc0d 586 SMART SM00382 366 552 8.8E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0033 8b2d471ddc2ff5696b90f18cc50be1d6 238 SUPERFAMILY SSF53955 95 225 6.37E-20 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Tlie_0033 8b2d471ddc2ff5696b90f18cc50be1d6 238 Pfam PF01464 Transglycosylase SLT domain 121 221 4.7E-18 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 Tlie_0033 8b2d471ddc2ff5696b90f18cc50be1d6 238 Gene3D G3DSA:1.10.530.10 116 238 4.2E-21 T 14-10-2018 Tlie_0915 43ccbde4bab77d4e8aab7c92e094b250 154 Gene3D G3DSA:3.40.1280.10 1 154 6.9E-51 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tlie_0915 43ccbde4bab77d4e8aab7c92e094b250 154 SUPERFAMILY SSF75217 2 153 3.66E-42 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Tlie_0915 43ccbde4bab77d4e8aab7c92e094b250 154 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 25.438 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Tlie_0915 43ccbde4bab77d4e8aab7c92e094b250 154 Pfam PF02590 Predicted SPOUT methyltransferase 2 153 6.3E-49 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Tlie_0915 43ccbde4bab77d4e8aab7c92e094b250 154 PIRSF PIRSF004505 1 154 3.0E-46 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Tlie_0962 1c461381d022a12effb5049299a316af 158 Gene3D G3DSA:1.20.120.610 1 155 3.1E-45 T 14-10-2018 Tlie_0962 1c461381d022a12effb5049299a316af 158 SUPERFAMILY SSF81333 85 154 4.84E-11 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Tlie_0962 1c461381d022a12effb5049299a316af 158 SUPERFAMILY SSF81333 6 72 1.18E-11 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Tlie_0962 1c461381d022a12effb5049299a316af 158 Pfam PF00137 ATP synthase subunit C 94 152 7.3E-13 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Tlie_0962 1c461381d022a12effb5049299a316af 158 Pfam PF00137 ATP synthase subunit C 11 69 3.9E-14 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Tlie_0601 c2784f246985e7e5d7f71366e0911026 539 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tlie_0601 c2784f246985e7e5d7f71366e0911026 539 SUPERFAMILY SSF52029 183 374 6.13E-84 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Tlie_0601 c2784f246985e7e5d7f71366e0911026 539 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 524 6.9E-102 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Tlie_0601 c2784f246985e7e5d7f71366e0911026 539 Hamap MF_00600 60 kDa chaperonin [groL]. 1 537 41.137 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tlie_0601 c2784f246985e7e5d7f71366e0911026 539 SUPERFAMILY SSF54849 136 203 1.63E-26 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Tlie_0601 c2784f246985e7e5d7f71366e0911026 539 Gene3D G3DSA:3.50.7.10 190 370 3.4E-232 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Tlie_0601 c2784f246985e7e5d7f71366e0911026 539 Gene3D G3DSA:1.10.560.10 7 520 3.4E-232 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Tlie_0601 c2784f246985e7e5d7f71366e0911026 539 Gene3D G3DSA:3.30.260.10 135 408 3.4E-232 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Tlie_0601 c2784f246985e7e5d7f71366e0911026 539 PRINTS PR00298 60kDa chaperonin signature 348 373 1.8E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tlie_0601 c2784f246985e7e5d7f71366e0911026 539 PRINTS PR00298 60kDa chaperonin signature 266 289 1.8E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tlie_0601 c2784f246985e7e5d7f71366e0911026 539 PRINTS PR00298 60kDa chaperonin signature 26 52 1.8E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tlie_0601 c2784f246985e7e5d7f71366e0911026 539 PRINTS PR00298 60kDa chaperonin signature 396 417 1.8E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tlie_0601 c2784f246985e7e5d7f71366e0911026 539 PRINTS PR00298 60kDa chaperonin signature 82 109 1.8E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tlie_0601 c2784f246985e7e5d7f71366e0911026 539 SUPERFAMILY SSF48592 6 520 2.75E-78 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Tlie_0601 c2784f246985e7e5d7f71366e0911026 539 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 4.3E-253 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tlie_0012 60bdac0fd863615b427b7fae36cf167d 619 SUPERFAMILY SSF48310 223 618 2.09E-100 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_0012 60bdac0fd863615b427b7fae36cf167d 619 Gene3D G3DSA:3.60.9.10 4 208 3.4E-70 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_0012 60bdac0fd863615b427b7fae36cf167d 619 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 225 615 2.0E-114 T 14-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_0012 60bdac0fd863615b427b7fae36cf167d 619 SMART SM00790 5 205 8.2E-81 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_0012 60bdac0fd863615b427b7fae36cf167d 619 Gene3D G3DSA:1.10.569.10 238 426 4.5E-123 T 14-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Tlie_0012 60bdac0fd863615b427b7fae36cf167d 619 Gene3D G3DSA:1.10.599.10 237 615 4.5E-123 T 14-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Tlie_0012 60bdac0fd863615b427b7fae36cf167d 619 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 9 201 2.3E-67 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_0012 60bdac0fd863615b427b7fae36cf167d 619 SUPERFAMILY SSF56228 7 204 9.81E-60 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_1408 c1b043cdcb889b66c3ec383ed66618d5 196 Pfam PF03734 L,D-transpeptidase catalytic domain 64 194 5.0E-20 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Tlie_1408 c1b043cdcb889b66c3ec383ed66618d5 196 SUPERFAMILY SSF141523 62 194 3.92E-26 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Tlie_1408 c1b043cdcb889b66c3ec383ed66618d5 196 Gene3D G3DSA:2.40.440.10 38 196 1.4E-31 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Tlie_1052 9656c9be61fd048d627273954dbf11de 206 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 20 175 8.3E-61 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 Tlie_1052 9656c9be61fd048d627273954dbf11de 206 Gene3D G3DSA:3.40.470.10 9 205 1.1E-71 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tlie_1052 9656c9be61fd048d627273954dbf11de 206 SMART SM00987 34 185 1.3E-35 T 14-10-2018 Tlie_1052 9656c9be61fd048d627273954dbf11de 206 Pfam PF03167 Uracil DNA glycosylase superfamily 35 169 3.1E-47 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tlie_1052 9656c9be61fd048d627273954dbf11de 206 SUPERFAMILY SSF52141 10 190 8.18E-63 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tlie_1052 9656c9be61fd048d627273954dbf11de 206 SMART SM00986 34 185 1.3E-35 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tlie_0493 f385b018f66a4a65b644c6eb3bb8ad08 530 SUPERFAMILY SSF56784 288 523 2.07E-41 T 14-10-2018 IPR036412 HAD-like superfamily Tlie_0493 f385b018f66a4a65b644c6eb3bb8ad08 530 Gene3D G3DSA:3.30.70.1020 368 444 1.9E-51 T 14-10-2018 Tlie_0493 f385b018f66a4a65b644c6eb3bb8ad08 530 SUPERFAMILY SSF56784 19 249 1.79E-32 T 14-10-2018 IPR036412 HAD-like superfamily Tlie_0493 f385b018f66a4a65b644c6eb3bb8ad08 530 Gene3D G3DSA:1.10.150.240 31 123 5.8E-51 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Tlie_0493 f385b018f66a4a65b644c6eb3bb8ad08 530 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 288 485 5.1E-26 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Tlie_0493 f385b018f66a4a65b644c6eb3bb8ad08 530 Gene3D G3DSA:3.40.50.1000 288 508 1.9E-51 T 14-10-2018 IPR023214 HAD superfamily Tlie_0493 f385b018f66a4a65b644c6eb3bb8ad08 530 Gene3D G3DSA:3.40.50.1000 22 231 5.8E-51 T 14-10-2018 IPR023214 HAD superfamily Tlie_0493 f385b018f66a4a65b644c6eb3bb8ad08 530 Pfam PF02358 Trehalose-phosphatase 290 512 3.4E-55 T 14-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 Tlie_0493 f385b018f66a4a65b644c6eb3bb8ad08 530 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 113 223 1.7E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tlie_0493 f385b018f66a4a65b644c6eb3bb8ad08 530 Pfam PF13419 Haloacid dehalogenase-like hydrolase 22 219 5.1E-16 T 14-10-2018 Tlie_0493 f385b018f66a4a65b644c6eb3bb8ad08 530 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 20 224 2.9E-49 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase Tlie_0493 f385b018f66a4a65b644c6eb3bb8ad08 530 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 285 523 3.4E-48 T 14-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 Tlie_0371 25239c851310818d61d96c396d16d67e 209 Gene3D G3DSA:1.20.120.680 7 207 3.6E-71 T 14-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Tlie_0371 25239c851310818d61d96c396d16d67e 209 SUPERFAMILY SSF101262 3 207 1.19E-61 T 14-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Tlie_0371 25239c851310818d61d96c396d16d67e 209 Pfam PF04961 Formiminotransferase-cyclodeaminase 7 187 4.3E-70 T 14-10-2018 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Tlie_0350 ac30d44185fcedb605d09c8b46856157 400 Gene3D G3DSA:1.10.3720.10 180 390 1.1E-19 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_0350 ac30d44185fcedb605d09c8b46856157 400 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 210 395 6.3E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tlie_0350 ac30d44185fcedb605d09c8b46856157 400 SUPERFAMILY SSF161098 187 377 4.71E-24 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_0337 fe6fc6d657ea5af3c6e8aac89a13874a 398 SUPERFAMILY SSF55031 192 301 3.89E-14 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tlie_0337 fe6fc6d657ea5af3c6e8aac89a13874a 398 SUPERFAMILY SSF53187 6 395 7.33E-58 T 14-10-2018 Tlie_0337 fe6fc6d657ea5af3c6e8aac89a13874a 398 Pfam PF01546 Peptidase family M20/M25/M40 77 394 3.3E-35 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tlie_0337 fe6fc6d657ea5af3c6e8aac89a13874a 398 Gene3D G3DSA:3.40.630.10 13 385 6.1E-82 T 14-10-2018 Tlie_0337 fe6fc6d657ea5af3c6e8aac89a13874a 398 Gene3D G3DSA:3.30.70.360 193 304 6.1E-82 T 14-10-2018 Tlie_0337 fe6fc6d657ea5af3c6e8aac89a13874a 398 Pfam PF07687 Peptidase dimerisation domain 190 291 7.5E-15 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Tlie_0758 c427d3027355fcf90a64c4f01cb3b631 356 Gene3D G3DSA:3.20.20.10 11 226 2.0E-25 T 14-10-2018 IPR029066 PLP-binding barrel Tlie_0758 c427d3027355fcf90a64c4f01cb3b631 356 Pfam PF01168 Alanine racemase, N-terminal domain 9 226 2.3E-22 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tlie_0758 c427d3027355fcf90a64c4f01cb3b631 356 SUPERFAMILY SSF51419 11 226 1.35E-25 T 14-10-2018 IPR029066 PLP-binding barrel Tlie_1129 458fc51c28a84cc1677057d0e3f306cd 243 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Tlie_1129 458fc51c28a84cc1677057d0e3f306cd 243 SUPERFAMILY SSF55174 6 89 8.07E-14 T 14-10-2018 Tlie_1129 458fc51c28a84cc1677057d0e3f306cd 243 SUPERFAMILY SSF55120 65 233 1.2E-34 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_1129 458fc51c28a84cc1677057d0e3f306cd 243 Pfam PF00849 RNA pseudouridylate synthase 66 197 1.7E-15 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_1129 458fc51c28a84cc1677057d0e3f306cd 243 SMART SM00363 6 67 1.7E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_1129 458fc51c28a84cc1677057d0e3f306cd 243 Gene3D G3DSA:3.30.70.580 66 232 4.7E-44 T 14-10-2018 Tlie_1129 458fc51c28a84cc1677057d0e3f306cd 243 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 229 4.2E-36 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Tlie_1129 458fc51c28a84cc1677057d0e3f306cd 243 Pfam PF01479 S4 domain 7 45 4.7E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_1129 458fc51c28a84cc1677057d0e3f306cd 243 Gene3D G3DSA:3.10.290.10 2 60 8.9E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tlie_1129 458fc51c28a84cc1677057d0e3f306cd 243 Gene3D G3DSA:3.30.70.1560 133 216 4.7E-44 T 14-10-2018 Tlie_1425 f9084cb667f0ad8a682e58aff9fb3fce 446 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 6.6E-70 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tlie_1425 f9084cb667f0ad8a682e58aff9fb3fce 446 SMART SM00962 101 296 4.1E-101 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tlie_1425 f9084cb667f0ad8a682e58aff9fb3fce 446 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 443 32.479 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Tlie_1425 f9084cb667f0ad8a682e58aff9fb3fce 446 SMART SM00963 1 86 3.3E-27 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tlie_1425 f9084cb667f0ad8a682e58aff9fb3fce 446 Gene3D G3DSA:3.40.50.300 90 285 1.9E-115 T 14-10-2018 Tlie_1425 f9084cb667f0ad8a682e58aff9fb3fce 446 Pfam PF02978 Signal peptide binding domain 328 425 1.1E-30 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Tlie_1425 f9084cb667f0ad8a682e58aff9fb3fce 446 Gene3D G3DSA:1.20.120.140 5 306 1.9E-115 T 14-10-2018 Tlie_1425 f9084cb667f0ad8a682e58aff9fb3fce 446 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 427 3.2E-159 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Tlie_1425 f9084cb667f0ad8a682e58aff9fb3fce 446 SUPERFAMILY SSF47364 1 90 7.59E-24 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Tlie_1425 f9084cb667f0ad8a682e58aff9fb3fce 446 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.8E-18 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tlie_1425 f9084cb667f0ad8a682e58aff9fb3fce 446 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tlie_1425 f9084cb667f0ad8a682e58aff9fb3fce 446 Gene3D G3DSA:1.10.260.30 327 442 4.5E-39 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Tlie_1425 f9084cb667f0ad8a682e58aff9fb3fce 446 SUPERFAMILY SSF52540 94 298 3.3E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1425 f9084cb667f0ad8a682e58aff9fb3fce 446 SUPERFAMILY SSF47446 298 429 1.83E-38 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Tlie_1425 f9084cb667f0ad8a682e58aff9fb3fce 446 SMART SM00382 100 407 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0642 6d50b0ab1166abaa9ba089bee8e77900 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.9E-64 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Tlie_0642 6d50b0ab1166abaa9ba089bee8e77900 156 Gene3D G3DSA:1.10.455.10 2 156 6.6E-60 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Tlie_0642 6d50b0ab1166abaa9ba089bee8e77900 156 PIRSF PIRSF002122 4 156 2.1E-58 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Tlie_0642 6d50b0ab1166abaa9ba089bee8e77900 156 SUPERFAMILY SSF47973 3 152 1.28E-57 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Tlie_0642 6d50b0ab1166abaa9ba089bee8e77900 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 33.98 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Tlie_0642 6d50b0ab1166abaa9ba089bee8e77900 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.0E-64 T 14-10-2018 IPR023798 Ribosomal protein S7 domain Tlie_1011 175e58b6481265858b088e91caf6a4bb 303 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 89 105 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Tlie_1011 175e58b6481265858b088e91caf6a4bb 303 Gene3D G3DSA:1.10.600.10 4 303 6.9E-85 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tlie_1011 175e58b6481265858b088e91caf6a4bb 303 Pfam PF00348 Polyprenyl synthetase 40 273 9.2E-55 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Tlie_1011 175e58b6481265858b088e91caf6a4bb 303 SUPERFAMILY SSF48576 12 300 2.34E-76 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tlie_1011 175e58b6481265858b088e91caf6a4bb 303 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 222 234 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Tlie_0292 90e1eb593e9f413c583ca94d991a47cb 285 SUPERFAMILY SSF51730 3 283 6.08E-92 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like Tlie_0292 90e1eb593e9f413c583ca94d991a47cb 285 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 15 284 3.4E-96 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 Tlie_0292 90e1eb593e9f413c583ca94d991a47cb 285 Gene3D G3DSA:3.20.20.220 2 285 4.5E-100 T 14-10-2018 Tlie_0292 90e1eb593e9f413c583ca94d991a47cb 285 Pfam PF02219 Methylenetetrahydrofolate reductase 10 284 3.2E-83 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Tlie_0445 87ebae0caa04a8e4f6cbe3a67de27c0e 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 2.9E-12 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Tlie_0445 87ebae0caa04a8e4f6cbe3a67de27c0e 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 2.9E-12 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Tlie_0445 87ebae0caa04a8e4f6cbe3a67de27c0e 181 PRINTS PR00338 Transcription termination factor NUSG signature 62 74 2.9E-12 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Tlie_0445 87ebae0caa04a8e4f6cbe3a67de27c0e 181 Gene3D G3DSA:2.30.30.30 122 181 1.4E-19 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Tlie_0445 87ebae0caa04a8e4f6cbe3a67de27c0e 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 10 181 9.9E-59 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Tlie_0445 87ebae0caa04a8e4f6cbe3a67de27c0e 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 7 181 23.958 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Tlie_0445 87ebae0caa04a8e4f6cbe3a67de27c0e 181 Pfam PF02357 Transcription termination factor nusG 9 112 6.7E-27 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Tlie_0445 87ebae0caa04a8e4f6cbe3a67de27c0e 181 SUPERFAMILY SSF82679 8 116 6.8E-40 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Tlie_0445 87ebae0caa04a8e4f6cbe3a67de27c0e 181 Gene3D G3DSA:3.30.70.940 2 121 1.4E-44 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Tlie_0445 87ebae0caa04a8e4f6cbe3a67de27c0e 181 Pfam PF00467 KOW motif 130 159 1.4E-8 T 14-10-2018 IPR005824 KOW Tlie_0445 87ebae0caa04a8e4f6cbe3a67de27c0e 181 SUPERFAMILY SSF50104 125 181 1.81E-13 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tlie_0445 87ebae0caa04a8e4f6cbe3a67de27c0e 181 SMART SM00738 7 115 7.8E-46 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Tlie_0445 87ebae0caa04a8e4f6cbe3a67de27c0e 181 SMART SM00739 127 154 9.9E-6 T 14-10-2018 IPR005824 KOW Tlie_1286 5889a97a4ee2707a7fd50b5e7d3851cd 512 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 255 328 9.3E-5 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Tlie_1286 5889a97a4ee2707a7fd50b5e7d3851cd 512 Gene3D G3DSA:3.40.47.10 168 308 2.9E-8 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Tlie_1286 5889a97a4ee2707a7fd50b5e7d3851cd 512 SUPERFAMILY SSF53901 185 294 4.03E-11 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Tlie_0960 d0c02165921c33220a1a9adaf1aff966 108 Gene3D G3DSA:1.20.5.620 6 48 4.2E-5 T 14-10-2018 Tlie_0960 d0c02165921c33220a1a9adaf1aff966 108 SUPERFAMILY SSF81573 7 62 1.83E-5 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Tlie_0960 d0c02165921c33220a1a9adaf1aff966 108 Pfam PF03179 Vacuolar (H+)-ATPase G subunit 11 103 5.0E-7 T 14-10-2018 IPR005124 Vacuolar (H+)-ATPase G subunit GO:0016471|GO:0042626|GO:1902600 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1229 1136acb7cba917c3c554760b9fdd87bd 184 SUPERFAMILY SSF52499 5 184 8.37E-50 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Tlie_1229 1136acb7cba917c3c554760b9fdd87bd 184 Gene3D G3DSA:3.40.50.850 2 184 3.3E-53 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Tlie_1229 1136acb7cba917c3c554760b9fdd87bd 184 Pfam PF00857 Isochorismatase family 13 161 5.2E-35 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Tlie_1196 a9c09c7fb20148a84069c6590b893a3c 355 Pfam PF13145 PPIC-type PPIASE domain 168 291 2.1E-18 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Tlie_1196 a9c09c7fb20148a84069c6590b893a3c 355 Gene3D G3DSA:3.10.50.40 189 274 1.0E-29 T 14-10-2018 Tlie_1196 a9c09c7fb20148a84069c6590b893a3c 355 SUPERFAMILY SSF109998 44 212 1.44E-27 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily Tlie_1196 a9c09c7fb20148a84069c6590b893a3c 355 Gene3D G3DSA:1.10.4030.30 44 188 1.0E-29 T 14-10-2018 Tlie_1196 a9c09c7fb20148a84069c6590b893a3c 355 Pfam PF13624 SurA N-terminal domain 3 158 4.6E-21 T 14-10-2018 Tlie_1071 afe33ad892cf49c8077c10212f4de483 378 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 322 333 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_1071 afe33ad892cf49c8077c10212f4de483 378 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 350 361 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_1071 afe33ad892cf49c8077c10212f4de483 378 Gene3D G3DSA:3.30.70.20 316 368 4.6E-12 T 14-10-2018 Tlie_1071 afe33ad892cf49c8077c10212f4de483 378 Pfam PF04015 Domain of unknown function (DUF362) 40 244 1.0E-40 T 14-10-2018 IPR007160 Domain of unknown function DUF362 Tlie_1071 afe33ad892cf49c8077c10212f4de483 378 Pfam PF00037 4Fe-4S binding domain 317 338 1.0E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_1071 afe33ad892cf49c8077c10212f4de483 378 SUPERFAMILY SSF54862 302 367 1.71E-16 T 14-10-2018 Tlie_0641 249582991897f6bd662358fae5ecfbff 123 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.6E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0641 249582991897f6bd662358fae5ecfbff 123 PIRSF PIRSF002133 1 123 2.5E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0641 249582991897f6bd662358fae5ecfbff 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 40.422 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0641 249582991897f6bd662358fae5ecfbff 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 123 5.4E-68 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0641 249582991897f6bd662358fae5ecfbff 123 SUPERFAMILY SSF50249 2 123 2.48E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0641 249582991897f6bd662358fae5ecfbff 123 Gene3D G3DSA:2.40.50.140 1 123 1.9E-63 T 14-10-2018 Tlie_0641 249582991897f6bd662358fae5ecfbff 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0641 249582991897f6bd662358fae5ecfbff 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.2E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0641 249582991897f6bd662358fae5ecfbff 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.2E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0641 249582991897f6bd662358fae5ecfbff 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.2E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0641 249582991897f6bd662358fae5ecfbff 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.2E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0641 249582991897f6bd662358fae5ecfbff 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.2E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0641 249582991897f6bd662358fae5ecfbff 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.2E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0941 59f2d95b3f217b442f921504356bf8a0 179 SUPERFAMILY SSF53271 13 176 4.85E-52 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tlie_0941 59f2d95b3f217b442f921504356bf8a0 179 Pfam PF00156 Phosphoribosyl transferase domain 17 162 1.2E-29 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tlie_0941 59f2d95b3f217b442f921504356bf8a0 179 Gene3D G3DSA:3.40.50.2020 2 179 8.9E-64 T 14-10-2018 Tlie_0941 59f2d95b3f217b442f921504356bf8a0 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 9 175 1.2E-62 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 Tlie_1343 8a1488f43026053d52eedcf80677457f 58 Gene3D G3DSA:1.20.5.1150 16 58 2.1E-15 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1343 8a1488f43026053d52eedcf80677457f 58 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 4 58 2.5E-19 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1343 8a1488f43026053d52eedcf80677457f 58 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.96 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1343 8a1488f43026053d52eedcf80677457f 58 Pfam PF01165 Ribosomal protein S21 4 57 7.1E-21 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1343 8a1488f43026053d52eedcf80677457f 58 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-13 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1343 8a1488f43026053d52eedcf80677457f 58 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-13 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1343 8a1488f43026053d52eedcf80677457f 58 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-13 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1343 8a1488f43026053d52eedcf80677457f 58 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-13 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1343 8a1488f43026053d52eedcf80677457f 58 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1343 8a1488f43026053d52eedcf80677457f 58 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 42 3.0E-5 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1000 1028c35e584d480d768b77e9a7e2dfaa 416 Gene3D G3DSA:1.10.260.150 32 318 4.4E-80 T 14-10-2018 Tlie_1000 1028c35e584d480d768b77e9a7e2dfaa 416 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 320 407 5.5E-6 T 14-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain Tlie_1000 1028c35e584d480d768b77e9a7e2dfaa 416 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 67 214 2.8E-41 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Tlie_1000 1028c35e584d480d768b77e9a7e2dfaa 416 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 67 214 3.8E-39 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Tlie_0989 d21dde56f29bdccff9cf13af0fcb5315 163 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 6 154 2.4E-54 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_0989 d21dde56f29bdccff9cf13af0fcb5315 163 Gene3D G3DSA:3.30.70.640 3 162 2.1E-63 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_0989 d21dde56f29bdccff9cf13af0fcb5315 163 SUPERFAMILY SSF55040 14 157 1.29E-55 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_0989 d21dde56f29bdccff9cf13af0fcb5315 163 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 4 160 31.724 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_0989 d21dde56f29bdccff9cf13af0fcb5315 163 Pfam PF01967 MoaC family 17 152 6.8E-51 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_1623 9034de4dc99f438b2d82f3bf399a504b 274 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 78 87 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site Tlie_1623 9034de4dc99f438b2d82f3bf399a504b 274 Pfam PF01226 Formate/nitrite transporter 8 264 1.0E-78 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 Tlie_1623 9034de4dc99f438b2d82f3bf399a504b 274 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 22 267 5.1E-70 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 Tlie_1623 9034de4dc99f438b2d82f3bf399a504b 274 Gene3D G3DSA:1.20.1080.10 4 274 5.7E-89 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Tlie_1105 8be107f89678ff6291ad5aaff19d0f60 332 Pfam PF02504 Fatty acid synthesis protein 2 316 6.6E-104 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Tlie_1105 8be107f89678ff6291ad5aaff19d0f60 332 Gene3D G3DSA:3.40.718.10 1 331 1.1E-123 T 14-10-2018 Tlie_1105 8be107f89678ff6291ad5aaff19d0f60 332 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 332 130.082 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Tlie_1105 8be107f89678ff6291ad5aaff19d0f60 332 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 328 4.7E-102 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Tlie_1105 8be107f89678ff6291ad5aaff19d0f60 332 SUPERFAMILY SSF53659 2 328 1.15E-91 T 14-10-2018 Tlie_1105 8be107f89678ff6291ad5aaff19d0f60 332 PIRSF PIRSF002465 1 330 1.4E-113 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Tlie_0296 6d4d5c03876a0c5d3525853f8042eb61 555 Gene3D G3DSA:3.30.1510.10 129 247 1.1E-210 T 14-10-2018 Tlie_0296 6d4d5c03876a0c5d3525853f8042eb61 555 Gene3D G3DSA:3.10.410.10 442 531 1.6E-38 T 14-10-2018 Tlie_0296 6d4d5c03876a0c5d3525853f8042eb61 555 Gene3D G3DSA:3.40.50.300 4 427 1.1E-210 T 14-10-2018 Tlie_0296 6d4d5c03876a0c5d3525853f8042eb61 555 SUPERFAMILY SSF52540 4 552 4.38E-247 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0296 6d4d5c03876a0c5d3525853f8042eb61 555 Pfam PF01268 Formate--tetrahydrofolate ligase 3 555 5.6E-273 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Tlie_0296 6d4d5c03876a0c5d3525853f8042eb61 555 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 555 48.928 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Tlie_0296 6d4d5c03876a0c5d3525853f8042eb61 555 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Tlie_0432 3954a344eb879e45ac836665a9085187 131 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 2 131 32.513 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Tlie_0432 3954a344eb879e45ac836665a9085187 131 ProSitePatterns PS00360 Ribosomal protein S9 signature. 70 88 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Tlie_0432 3954a344eb879e45ac836665a9085187 131 SUPERFAMILY SSF54211 6 131 2.39E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_0432 3954a344eb879e45ac836665a9085187 131 Pfam PF00380 Ribosomal protein S9/S16 11 131 6.0E-46 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Tlie_0432 3954a344eb879e45ac836665a9085187 131 Gene3D G3DSA:3.30.230.10 3 131 3.3E-50 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tlie_0995 5499f1f6a48bed9c21328edb0dd4bea7 340 Gene3D G3DSA:3.40.50.720 7 331 7.3E-150 T 14-10-2018 Tlie_0995 5499f1f6a48bed9c21328edb0dd4bea7 340 PIRSF PIRSF000149 4 339 6.5E-130 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0995 5499f1f6a48bed9c21328edb0dd4bea7 340 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 7 330 3.1E-134 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0995 5499f1f6a48bed9c21328edb0dd4bea7 340 SUPERFAMILY SSF51735 6 174 3.24E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0995 5499f1f6a48bed9c21328edb0dd4bea7 340 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 156 163 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0995 5499f1f6a48bed9c21328edb0dd4bea7 340 Gene3D G3DSA:3.30.360.10 157 320 7.3E-150 T 14-10-2018 Tlie_0995 5499f1f6a48bed9c21328edb0dd4bea7 340 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 163 318 1.5E-65 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0995 5499f1f6a48bed9c21328edb0dd4bea7 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 235 252 6.7E-43 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0995 5499f1f6a48bed9c21328edb0dd4bea7 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 115 128 6.7E-43 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0995 5499f1f6a48bed9c21328edb0dd4bea7 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 152 170 6.7E-43 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0995 5499f1f6a48bed9c21328edb0dd4bea7 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 275 290 6.7E-43 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0995 5499f1f6a48bed9c21328edb0dd4bea7 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 179 195 6.7E-43 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0995 5499f1f6a48bed9c21328edb0dd4bea7 340 SMART SM00846 6 158 9.9E-85 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0995 5499f1f6a48bed9c21328edb0dd4bea7 340 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 6 108 1.6E-34 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0995 5499f1f6a48bed9c21328edb0dd4bea7 340 SUPERFAMILY SSF55347 157 318 8.93E-72 T 14-10-2018 Tlie_1141 e89289c4d9753e719b30009bd6e27481 200 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 4 199 3.9E-56 T 14-10-2018 IPR019870 Selenium metabolism protein YedF Tlie_1141 e89289c4d9753e719b30009bd6e27481 200 SUPERFAMILY SSF75169 98 198 6.02E-12 T 14-10-2018 IPR027396 DsrEFH-like Tlie_1141 e89289c4d9753e719b30009bd6e27481 200 SUPERFAMILY SSF64307 2 69 6.8E-10 T 14-10-2018 IPR036868 TusA-like domain superfamily Tlie_1141 e89289c4d9753e719b30009bd6e27481 200 Gene3D G3DSA:3.30.110.40 2 83 2.2E-15 T 14-10-2018 IPR036868 TusA-like domain superfamily Tlie_1141 e89289c4d9753e719b30009bd6e27481 200 Gene3D G3DSA:3.40.1260.10 89 198 7.0E-6 T 14-10-2018 IPR027396 DsrEFH-like Tlie_1141 e89289c4d9753e719b30009bd6e27481 200 Pfam PF02635 DsrE/DsrF-like family 128 198 4.6E-6 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Tlie_1141 e89289c4d9753e719b30009bd6e27481 200 Pfam PF01206 Sulfurtransferase TusA 3 68 5.2E-11 T 14-10-2018 IPR001455 TusA-like domain Tlie_0581 82feb8293f586cb563de839527987043 473 SMART SM00257 283 326 3.9E-10 T 14-10-2018 IPR018392 LysM domain Tlie_0581 82feb8293f586cb563de839527987043 473 SMART SM00257 157 201 1.3E-8 T 14-10-2018 IPR018392 LysM domain Tlie_0581 82feb8293f586cb563de839527987043 473 SMART SM00257 233 277 1.1E-12 T 14-10-2018 IPR018392 LysM domain Tlie_0581 82feb8293f586cb563de839527987043 473 SUPERFAMILY SSF54106 156 201 1.44E-9 T 14-10-2018 Tlie_0581 82feb8293f586cb563de839527987043 473 Gene3D G3DSA:2.70.70.10 333 473 4.3E-57 T 14-10-2018 IPR011055 Duplicated hybrid motif Tlie_0581 82feb8293f586cb563de839527987043 473 Gene3D G3DSA:3.10.350.10 218 279 1.0E-15 T 14-10-2018 IPR036779 LysM domain superfamily Tlie_0581 82feb8293f586cb563de839527987043 473 Gene3D G3DSA:3.10.350.10 142 213 1.5E-14 T 14-10-2018 IPR036779 LysM domain superfamily Tlie_0581 82feb8293f586cb563de839527987043 473 Gene3D G3DSA:3.10.350.10 280 332 1.2E-11 T 14-10-2018 IPR036779 LysM domain superfamily Tlie_0581 82feb8293f586cb563de839527987043 473 Pfam PF01551 Peptidase family M23 374 468 1.7E-36 T 14-10-2018 IPR016047 Peptidase M23 Tlie_0581 82feb8293f586cb563de839527987043 473 Pfam PF01476 LysM domain 158 201 1.2E-11 T 14-10-2018 IPR018392 LysM domain Tlie_0581 82feb8293f586cb563de839527987043 473 Pfam PF01476 LysM domain 284 326 2.1E-9 T 14-10-2018 IPR018392 LysM domain Tlie_0581 82feb8293f586cb563de839527987043 473 Pfam PF01476 LysM domain 234 277 5.9E-14 T 14-10-2018 IPR018392 LysM domain Tlie_0581 82feb8293f586cb563de839527987043 473 SUPERFAMILY SSF51261 234 472 2.46E-66 T 14-10-2018 IPR011055 Duplicated hybrid motif Tlie_0670 8a712530e5c0b56be14f8c9f1051f41b 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.763 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Tlie_0670 8a712530e5c0b56be14f8c9f1051f41b 72 SUPERFAMILY SSF50249 1 71 4.65E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0670 8a712530e5c0b56be14f8c9f1051f41b 72 Gene3D G3DSA:2.40.50.140 1 72 1.1E-37 T 14-10-2018 Tlie_0670 8a712530e5c0b56be14f8c9f1051f41b 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.3E-28 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Tlie_0670 8a712530e5c0b56be14f8c9f1051f41b 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 2.7E-38 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Tlie_0670 8a712530e5c0b56be14f8c9f1051f41b 72 SMART SM00316 2 72 7.9E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tlie_1024 a47446ddcff9cadce1bc8874ae211c27 331 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 8 325 7.5E-93 T 14-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme Tlie_1024 a47446ddcff9cadce1bc8874ae211c27 331 Pfam PF04055 Radical SAM superfamily 81 229 6.6E-22 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_1024 a47446ddcff9cadce1bc8874ae211c27 331 PIRSF PIRSF004869 3 306 6.6E-83 T 14-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted Tlie_1024 a47446ddcff9cadce1bc8874ae211c27 331 Pfam PF13353 4Fe-4S single cluster domain 72 166 2.1E-6 T 14-10-2018 Tlie_1024 a47446ddcff9cadce1bc8874ae211c27 331 Gene3D G3DSA:3.20.20.70 62 282 8.5E-36 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1024 a47446ddcff9cadce1bc8874ae211c27 331 SUPERFAMILY SSF102114 71 306 2.09E-34 T 14-10-2018 Tlie_1028 2b72c93b6bca87fa28151c52b317eb24 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 10 350 5.5E-129 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Tlie_1028 2b72c93b6bca87fa28151c52b317eb24 350 Gene3D G3DSA:3.40.1780.10 22 349 6.9E-126 T 14-10-2018 Tlie_1028 2b72c93b6bca87fa28151c52b317eb24 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 9 350 45.367 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Tlie_1028 2b72c93b6bca87fa28151c52b317eb24 350 Pfam PF02547 Queuosine biosynthesis protein 11 349 2.0E-138 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Tlie_1028 2b72c93b6bca87fa28151c52b317eb24 350 Gene3D G3DSA:2.40.10.240 72 171 6.9E-126 T 14-10-2018 Tlie_1028 2b72c93b6bca87fa28151c52b317eb24 350 SUPERFAMILY SSF111337 10 350 1.57E-132 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Tlie_1198 b21d5353cc3cf134037f92fecdcb7062 437 Gene3D G3DSA:1.10.8.70 291 337 1.4E-5 T 14-10-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 Tlie_1198 b21d5353cc3cf134037f92fecdcb7062 437 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 110 432 4.5E-102 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Tlie_1198 b21d5353cc3cf134037f92fecdcb7062 437 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_1198 b21d5353cc3cf134037f92fecdcb7062 437 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 435 30.459 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Tlie_1198 b21d5353cc3cf134037f92fecdcb7062 437 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 7.7E-16 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tlie_1198 b21d5353cc3cf134037f92fecdcb7062 437 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 7.7E-16 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tlie_1198 b21d5353cc3cf134037f92fecdcb7062 437 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 7.7E-16 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tlie_1198 b21d5353cc3cf134037f92fecdcb7062 437 Gene3D G3DSA:1.10.10.350 341 436 3.7E-21 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Tlie_1198 b21d5353cc3cf134037f92fecdcb7062 437 SUPERFAMILY SSF52374 4 271 5.39E-102 T 14-10-2018 Tlie_1198 b21d5353cc3cf134037f92fecdcb7062 437 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 107 4.2E-43 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Tlie_1198 b21d5353cc3cf134037f92fecdcb7062 437 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 112 277 1.0E-50 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Tlie_1198 b21d5353cc3cf134037f92fecdcb7062 437 Gene3D G3DSA:3.40.50.620 109 286 1.6E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1198 b21d5353cc3cf134037f92fecdcb7062 437 Gene3D G3DSA:3.40.50.620 1 108 3.4E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1198 b21d5353cc3cf134037f92fecdcb7062 437 SUPERFAMILY SSF48163 272 433 9.42E-35 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Tlie_0266 51b8447b56898096f17be50dc5f2a2de 173 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 16 172 6.3E-27 T 14-10-2018 IPR013343 CRISPR-associated protein Cas4 Tlie_0266 51b8447b56898096f17be50dc5f2a2de 173 Pfam PF01930 Domain of unknown function DUF83 15 173 8.4E-50 T 14-10-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 Tlie_1744 5b1062fd45c391d260890b6b80a5016c 370 SUPERFAMILY SSF53092 5 141 2.62E-9 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Tlie_1744 5b1062fd45c391d260890b6b80a5016c 370 Pfam PF00557 Metallopeptidase family M24 150 352 1.2E-67 T 14-10-2018 IPR000994 Peptidase M24 Tlie_1744 5b1062fd45c391d260890b6b80a5016c 370 SUPERFAMILY SSF55920 141 368 1.31E-80 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Tlie_1744 5b1062fd45c391d260890b6b80a5016c 370 Gene3D G3DSA:3.90.230.10 140 370 9.9E-84 T 14-10-2018 Tlie_1744 5b1062fd45c391d260890b6b80a5016c 370 Pfam PF01321 Creatinase/Prolidase N-terminal domain 9 142 8.2E-5 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Tlie_1744 5b1062fd45c391d260890b6b80a5016c 370 Gene3D G3DSA:3.40.350.10 2 138 1.5E-18 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Tlie_1603 f25ca4e80a5d1e6c2c46f247783b0a03 515 Pfam PF04073 Aminoacyl-tRNA editing domain 204 328 1.1E-29 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Tlie_1603 f25ca4e80a5d1e6c2c46f247783b0a03 515 SUPERFAMILY SSF52954 410 512 2.72E-21 T 14-10-2018 Tlie_1603 f25ca4e80a5d1e6c2c46f247783b0a03 515 Gene3D G3DSA:3.90.960.10 188 337 1.9E-43 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Tlie_1603 f25ca4e80a5d1e6c2c46f247783b0a03 515 Gene3D G3DSA:3.40.50.800 410 513 4.7E-22 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Tlie_1603 f25ca4e80a5d1e6c2c46f247783b0a03 515 SUPERFAMILY SSF55826 202 336 5.1E-30 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Tlie_1603 f25ca4e80a5d1e6c2c46f247783b0a03 515 Pfam PF03129 Anticodon binding domain 421 508 1.0E-13 T 14-10-2018 IPR004154 Anticodon-binding Tlie_0744 908ea7fe8a01fbe4fe181fe459fedba9 234 Gene3D G3DSA:3.30.1360.170 2 204 7.6E-71 T 14-10-2018 Tlie_0744 908ea7fe8a01fbe4fe181fe459fedba9 234 Pfam PF02511 Thymidylate synthase complementing protein 6 195 1.4E-70 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Tlie_0744 908ea7fe8a01fbe4fe181fe459fedba9 234 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 3 209 31.705 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Tlie_0744 908ea7fe8a01fbe4fe181fe459fedba9 234 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 5 200 1.0E-61 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Tlie_0744 908ea7fe8a01fbe4fe181fe459fedba9 234 SUPERFAMILY SSF69796 3 206 1.07E-65 T 14-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Tlie_1255 807f61de41ca776b7ec9fbf3241969d6 501 SUPERFAMILY SSF50249 11 153 2.94E-36 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_1255 807f61de41ca776b7ec9fbf3241969d6 501 Pfam PF01336 OB-fold nucleic acid binding domain 67 144 1.9E-13 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Tlie_1255 807f61de41ca776b7ec9fbf3241969d6 501 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 500 1.5E-194 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tlie_1255 807f61de41ca776b7ec9fbf3241969d6 501 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 497 1.8E-78 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_1255 807f61de41ca776b7ec9fbf3241969d6 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 197 207 7.7E-35 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tlie_1255 807f61de41ca776b7ec9fbf3241969d6 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 242 255 7.7E-35 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tlie_1255 807f61de41ca776b7ec9fbf3241969d6 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 382 398 7.7E-35 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tlie_1255 807f61de41ca776b7ec9fbf3241969d6 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 260 277 7.7E-35 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tlie_1255 807f61de41ca776b7ec9fbf3241969d6 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 213 229 7.7E-35 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tlie_1255 807f61de41ca776b7ec9fbf3241969d6 501 Gene3D G3DSA:3.30.930.10 156 501 2.6E-130 T 14-10-2018 Tlie_1255 807f61de41ca776b7ec9fbf3241969d6 501 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 18 500 42.973 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tlie_1255 807f61de41ca776b7ec9fbf3241969d6 501 SUPERFAMILY SSF55681 160 498 3.87E-116 T 14-10-2018 Tlie_1255 807f61de41ca776b7ec9fbf3241969d6 501 Gene3D G3DSA:2.40.50.140 4 155 2.1E-41 T 14-10-2018 Tlie_1839 6127b955420c8eb66b6b02dc2bbe5741 266 Gene3D G3DSA:3.20.20.70 2 265 7.4E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1839 6127b955420c8eb66b6b02dc2bbe5741 266 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 11 256 2.3E-78 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tlie_1839 6127b955420c8eb66b6b02dc2bbe5741 266 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 10 259 35.794 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tlie_1839 6127b955420c8eb66b6b02dc2bbe5741 266 Pfam PF00290 Tryptophan synthase alpha chain 10 259 4.3E-88 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tlie_1839 6127b955420c8eb66b6b02dc2bbe5741 266 SUPERFAMILY SSF51366 2 259 2.07E-84 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tlie_0724 a43394189f53650352d6bfb1299a4796 149 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 149 32.294 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Tlie_0724 a43394189f53650352d6bfb1299a4796 149 SUPERFAMILY SSF51283 6 149 1.31E-50 T 14-10-2018 IPR036157 dUTPase-like superfamily Tlie_0724 a43394189f53650352d6bfb1299a4796 149 Gene3D G3DSA:2.70.40.10 6 148 4.8E-54 T 14-10-2018 IPR036157 dUTPase-like superfamily Tlie_0724 a43394189f53650352d6bfb1299a4796 149 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 149 1.8E-54 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Tlie_0724 a43394189f53650352d6bfb1299a4796 149 Pfam PF00692 dUTPase 20 148 3.7E-35 T 14-10-2018 IPR029054 dUTPase-like Tlie_1566 6eca65852139ffa5d105577275a69af4 410 SMART SM01329 16 381 7.0E-134 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Tlie_1566 6eca65852139ffa5d105577275a69af4 410 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 16 381 9.5E-85 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Tlie_1566 6eca65852139ffa5d105577275a69af4 410 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 267 286 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Tlie_1566 6eca65852139ffa5d105577275a69af4 410 Gene3D G3DSA:3.40.718.10 1 407 4.2E-122 T 14-10-2018 Tlie_1566 6eca65852139ffa5d105577275a69af4 410 SUPERFAMILY SSF53659 12 384 1.06E-105 T 14-10-2018 Tlie_0255 e34c898dc48f291635c1a715967b9cd6 255 SUPERFAMILY SSF51569 9 253 1.06E-68 T 14-10-2018 Tlie_0255 e34c898dc48f291635c1a715967b9cd6 255 Pfam PF01487 Type I 3-dehydroquinase 24 251 1.8E-61 T 14-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tlie_0255 e34c898dc48f291635c1a715967b9cd6 255 Gene3D G3DSA:3.20.20.70 6 255 1.6E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0255 e34c898dc48f291635c1a715967b9cd6 255 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 26 250 3.0E-61 T 14-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tlie_0255 e34c898dc48f291635c1a715967b9cd6 255 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 22 254 34.677 T 14-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tlie_1579 d374534d9deb3c2d32062a97c010f38e 338 Gene3D G3DSA:3.40.190.170 29 337 5.2E-71 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Tlie_1579 d374534d9deb3c2d32062a97c010f38e 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 37 317 3.2E-44 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Tlie_1146 4c2c8a6e823c17cc8ef8a5789e9d059f 235 SMART SM01211 1 229 1.0E-117 T 14-10-2018 Tlie_1146 4c2c8a6e823c17cc8ef8a5789e9d059f 235 SUPERFAMILY SSF52317 1 228 4.86E-70 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_1146 4c2c8a6e823c17cc8ef8a5789e9d059f 235 Gene3D G3DSA:3.40.50.880 1 230 6.7E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_1146 4c2c8a6e823c17cc8ef8a5789e9d059f 235 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 227 42.909 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tlie_1146 4c2c8a6e823c17cc8ef8a5789e9d059f 235 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 212 1.2E-42 T 14-10-2018 Tlie_1146 4c2c8a6e823c17cc8ef8a5789e9d059f 235 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 228 2.7E-93 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tlie_1146 4c2c8a6e823c17cc8ef8a5789e9d059f 235 PIRSF PIRSF001586 1 232 5.9E-84 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tlie_0576 e1361f1e1f55854d7fa13a653d1e092b 288 Gene3D G3DSA:3.90.1640.20 20 278 1.0E-79 T 14-10-2018 Tlie_0576 e1361f1e1f55854d7fa13a653d1e092b 288 Pfam PF14336 Domain of unknown function (DUF4392) 10 272 4.3E-84 T 14-10-2018 IPR025504 Domain of unknown function DUF4392 KEGG: 00471+4.2.1.48 Tlie_0209 28eb8d429405b39b25f5700201921e94 467 Gene3D G3DSA:3.40.605.10 39 244 7.7E-122 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Tlie_0209 28eb8d429405b39b25f5700201921e94 467 PIRSF PIRSF036410 1 467 1.6E-180 T 14-10-2018 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related Tlie_0209 28eb8d429405b39b25f5700201921e94 467 Pfam PF00171 Aldehyde dehydrogenase family 38 296 1.2E-23 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Tlie_0209 28eb8d429405b39b25f5700201921e94 467 Pfam PF00171 Aldehyde dehydrogenase family 348 423 5.0E-7 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Tlie_0209 28eb8d429405b39b25f5700201921e94 467 SUPERFAMILY SSF53720 38 456 2.23E-64 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Tlie_0209 28eb8d429405b39b25f5700201921e94 467 Gene3D G3DSA:3.40.309.10 245 422 7.7E-122 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Tlie_1359 029a398a75e62b7cfe95945058dbc293 66 SUPERFAMILY SSF55008 1 64 8.38E-13 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Tlie_1359 029a398a75e62b7cfe95945058dbc293 66 Gene3D G3DSA:3.30.70.100 2 65 1.1E-15 T 14-10-2018 Tlie_1359 029a398a75e62b7cfe95945058dbc293 66 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 36 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Tlie_1359 029a398a75e62b7cfe95945058dbc293 66 Pfam PF00403 Heavy-metal-associated domain 6 60 1.5E-8 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Tlie_0549 ebbcfd910f5a932e3edad54b85535236 146 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1 136 2.3E-52 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Tlie_0549 ebbcfd910f5a932e3edad54b85535236 146 SUPERFAMILY SSF54637 1 137 3.89E-42 T 14-10-2018 IPR029069 HotDog domain superfamily Tlie_0549 ebbcfd910f5a932e3edad54b85535236 146 Pfam PF07977 FabA-like domain 10 131 2.1E-31 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Tlie_0549 ebbcfd910f5a932e3edad54b85535236 146 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 1 139 32.222 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Tlie_0549 ebbcfd910f5a932e3edad54b85535236 146 Gene3D G3DSA:3.10.129.10 1 145 9.8E-55 T 14-10-2018 Tlie_0322 6e6cd72d6008ad7e9c4946daf7ba8d32 437 PIRSF PIRSF002808 3 435 8.1E-46 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 Tlie_0322 6e6cd72d6008ad7e9c4946daf7ba8d32 437 Gene3D G3DSA:1.20.1250.20 12 212 2.1E-41 T 14-10-2018 Tlie_0322 6e6cd72d6008ad7e9c4946daf7ba8d32 437 Gene3D G3DSA:1.20.1250.20 226 424 6.0E-26 T 14-10-2018 Tlie_0322 6e6cd72d6008ad7e9c4946daf7ba8d32 437 Pfam PF07690 Major Facilitator Superfamily 28 346 1.2E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tlie_0322 6e6cd72d6008ad7e9c4946daf7ba8d32 437 SUPERFAMILY SSF103473 13 420 5.23E-69 T 14-10-2018 IPR036259 MFS transporter superfamily Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 Pfam PF01368 DHH family 3 145 3.6E-8 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 SUPERFAMILY SSF81301 451 600 2.72E-33 T 14-10-2018 Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 Pfam PF01743 Poly A polymerase head domain 477 603 2.8E-30 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 Pfam PF02272 DHHA1 domain 187 298 2.4E-9 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 Pfam PF00571 CBS domain 372 425 2.6E-15 T 14-10-2018 IPR000644 CBS domain Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 Pfam PF00571 CBS domain 310 362 1.3E-10 T 14-10-2018 IPR000644 CBS domain Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 Gene3D G3DSA:3.90.1640.10 2 178 1.4E-27 T 14-10-2018 Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 Gene3D G3DSA:3.10.310.30 194 296 1.6E-7 T 14-10-2018 Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 Gene3D G3DSA:3.10.580.10 297 365 1.2E-12 T 14-10-2018 Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 SMART SM00116 379 426 7.2E-12 T 14-10-2018 IPR000644 CBS domain Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 SMART SM00116 317 364 4.0E-9 T 14-10-2018 IPR000644 CBS domain Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 Gene3D G3DSA:3.30.460.10 442 598 2.6E-46 T 14-10-2018 Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 Gene3D G3DSA:3.10.580.10 366 440 2.6E-17 T 14-10-2018 Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 SUPERFAMILY SSF54631 306 426 6.95E-35 T 14-10-2018 Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 629 690 3.6E-6 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 SUPERFAMILY SSF81891 601 868 2.09E-37 T 14-10-2018 Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 Gene3D G3DSA:1.10.3090.10 599 867 5.2E-60 T 14-10-2018 Tlie_1172 0f7986834a94f6f1cf2d1a37486b94f5 873 SUPERFAMILY SSF64182 3 296 1.57E-44 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily Tlie_1391 3de8246def7460e7e4b43e86563dcb38 427 PIRSF PIRSF004911 1 396 2.8E-163 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Tlie_1391 3de8246def7460e7e4b43e86563dcb38 427 Pfam PF04055 Radical SAM superfamily 126 273 1.1E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_1391 3de8246def7460e7e4b43e86563dcb38 427 Gene3D G3DSA:2.40.50.600 345 411 8.0E-17 T 14-10-2018 Tlie_1391 3de8246def7460e7e4b43e86563dcb38 427 Pfam PF13353 4Fe-4S single cluster domain 124 194 1.4E-5 T 14-10-2018 Tlie_1391 3de8246def7460e7e4b43e86563dcb38 427 SUPERFAMILY SSF102114 110 353 1.44E-34 T 14-10-2018 Tlie_1391 3de8246def7460e7e4b43e86563dcb38 427 Gene3D G3DSA:3.20.20.70 59 344 1.0E-115 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1391 3de8246def7460e7e4b43e86563dcb38 427 TIGRFAM TIGR00238 TIGR00238: KamA family protein 10 338 2.1E-118 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Tlie_1391 3de8246def7460e7e4b43e86563dcb38 427 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 18 422 7.5E-183 T 14-10-2018 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 Tlie_1391 3de8246def7460e7e4b43e86563dcb38 427 Pfam PF12544 Lysine-2,3-aminomutase 317 425 6.7E-37 T 14-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain Tlie_0542 c9a22ceb772c9ab993d2db9914254dd7 217 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 7 184 2.6E-51 T 14-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Tlie_0542 c9a22ceb772c9ab993d2db9914254dd7 217 PIRSF PIRSF000709 2 189 1.2E-23 T 14-10-2018 Tlie_0542 c9a22ceb772c9ab993d2db9914254dd7 217 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 200 1.0E-63 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tlie_0542 c9a22ceb772c9ab993d2db9914254dd7 217 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 9 18 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Tlie_0542 c9a22ceb772c9ab993d2db9914254dd7 217 SMART SM00855 6 161 2.2E-24 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tlie_0542 c9a22ceb772c9ab993d2db9914254dd7 217 Gene3D G3DSA:3.40.50.1240 5 210 6.8E-68 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Tlie_0542 c9a22ceb772c9ab993d2db9914254dd7 217 SUPERFAMILY SSF53254 5 207 1.62E-64 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Tlie_0942 aa6cee41f042a4824867bd3d079a00fe 624 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 10 604 38.26 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Tlie_0942 aa6cee41f042a4824867bd3d079a00fe 624 Gene3D G3DSA:1.10.8.60 327 403 2.5E-33 T 14-10-2018 Tlie_0942 aa6cee41f042a4824867bd3d079a00fe 624 Gene3D G3DSA:3.40.50.300 140 326 1.9E-68 T 14-10-2018 Tlie_0942 aa6cee41f042a4824867bd3d079a00fe 624 Pfam PF06480 FtsH Extracellular 9 96 1.5E-8 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 Tlie_0942 aa6cee41f042a4824867bd3d079a00fe 624 Pfam PF01434 Peptidase family M41 386 595 7.6E-85 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Tlie_0942 aa6cee41f042a4824867bd3d079a00fe 624 SUPERFAMILY SSF52540 148 396 1.42E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0942 aa6cee41f042a4824867bd3d079a00fe 624 Gene3D G3DSA:2.40.50.920 31 103 3.1E-5 T 14-10-2018 Tlie_0942 aa6cee41f042a4824867bd3d079a00fe 624 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Tlie_0942 aa6cee41f042a4824867bd3d079a00fe 624 SMART SM00382 188 327 3.9E-25 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0942 aa6cee41f042a4824867bd3d079a00fe 624 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 3.0E-42 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tlie_0942 aa6cee41f042a4824867bd3d079a00fe 624 Gene3D G3DSA:1.20.58.760 406 613 1.8E-82 T 14-10-2018 Tlie_0942 aa6cee41f042a4824867bd3d079a00fe 624 SUPERFAMILY SSF140990 407 597 2.49E-77 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Tlie_0942 aa6cee41f042a4824867bd3d079a00fe 624 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 104 596 2.1E-237 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Tlie_1828 f5d0a754ced02a636987db680b18a9b7 507 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 1 459 17.008 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_1828 f5d0a754ced02a636987db680b18a9b7 507 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 11 495 1.8E-96 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_1828 f5d0a754ced02a636987db680b18a9b7 507 Pfam PF03023 MviN-like protein 27 457 9.8E-84 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_1828 f5d0a754ced02a636987db680b18a9b7 507 PRINTS PR01806 Virulence factor MviN signature 251 277 6.7E-20 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_1828 f5d0a754ced02a636987db680b18a9b7 507 PRINTS PR01806 Virulence factor MviN signature 401 418 6.7E-20 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_1828 f5d0a754ced02a636987db680b18a9b7 507 PRINTS PR01806 Virulence factor MviN signature 31 50 6.7E-20 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_1828 f5d0a754ced02a636987db680b18a9b7 507 PRINTS PR01806 Virulence factor MviN signature 152 173 6.7E-20 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_1828 f5d0a754ced02a636987db680b18a9b7 507 PRINTS PR01806 Virulence factor MviN signature 349 368 6.7E-20 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_1828 f5d0a754ced02a636987db680b18a9b7 507 PIRSF PIRSF002869 1 500 3.0E-121 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tlie_1199 8ab7fcd5741f6b5c31a15c125c721e62 213 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 194 205 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_1199 8ab7fcd5741f6b5c31a15c125c721e62 213 Gene3D G3DSA:3.30.70.3270 46 159 6.6E-22 T 14-10-2018 Tlie_1199 8ab7fcd5741f6b5c31a15c125c721e62 213 Pfam PF13237 4Fe-4S dicluster domain 59 108 2.1E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_1199 8ab7fcd5741f6b5c31a15c125c721e62 213 Gene3D G3DSA:3.30.70.20 160 209 7.4E-16 T 14-10-2018 Tlie_1199 8ab7fcd5741f6b5c31a15c125c721e62 213 SUPERFAMILY SSF54862 49 130 1.51E-20 T 14-10-2018 Tlie_1199 8ab7fcd5741f6b5c31a15c125c721e62 213 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 66 77 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_1199 8ab7fcd5741f6b5c31a15c125c721e62 213 Pfam PF14697 4Fe-4S dicluster domain 158 209 1.7E-11 T 14-10-2018 Tlie_1199 8ab7fcd5741f6b5c31a15c125c721e62 213 SUPERFAMILY SSF54862 155 212 1.67E-21 T 14-10-2018 Tlie_1436 546271b17c7ec47be3f56d4bae9a2ef4 311 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 8 280 1.2E-70 T 14-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 Tlie_0711 f191c057acd71b7c73d55c25b0598329 101 SMART SM01234 13 80 6.9E-37 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Tlie_0711 f191c057acd71b7c73d55c25b0598329 101 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 19 83 4.0E-28 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Tlie_0711 f191c057acd71b7c73d55c25b0598329 101 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 13 81 22.765 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Tlie_0711 f191c057acd71b7c73d55c25b0598329 101 Pfam PF01809 Haemolytic domain 15 80 9.7E-28 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Tlie_0711 f191c057acd71b7c73d55c25b0598329 101 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 28 80 3.0E-15 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Tlie_1118 4d084e312ad950e7bee7dfe98f8320fd 275 SMART SM00650 24 200 2.7E-52 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Tlie_1118 4d084e312ad950e7bee7dfe98f8320fd 275 SUPERFAMILY SSF53335 8 270 1.82E-59 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_1118 4d084e312ad950e7bee7dfe98f8320fd 275 Pfam PF00398 Ribosomal RNA adenine dimethylase 7 268 9.3E-58 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Tlie_1118 4d084e312ad950e7bee7dfe98f8320fd 275 Gene3D G3DSA:3.40.50.150 3 202 8.6E-61 T 14-10-2018 Tlie_1118 4d084e312ad950e7bee7dfe98f8320fd 275 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 8 271 42.285 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Tlie_1118 4d084e312ad950e7bee7dfe98f8320fd 275 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 9 268 2.7E-71 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Tlie_1118 4d084e312ad950e7bee7dfe98f8320fd 275 Gene3D G3DSA:1.10.8.100 206 271 4.9E-18 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Tlie_1118 4d084e312ad950e7bee7dfe98f8320fd 275 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 40 68 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Tlie_1437 645d5ea31d32a006b96f3de8dd9704bd 120 SMART SM00530 6 61 4.6E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tlie_1437 645d5ea31d32a006b96f3de8dd9704bd 120 Pfam PF01381 Helix-turn-helix 7 61 2.9E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tlie_1437 645d5ea31d32a006b96f3de8dd9704bd 120 Gene3D G3DSA:1.10.260.40 1 70 9.7E-21 T 14-10-2018 Tlie_1437 645d5ea31d32a006b96f3de8dd9704bd 120 SUPERFAMILY SSF47413 3 65 6.44E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tlie_1682 0ff329e866fa85a5ad19eb0e316da520 65 Gene3D G3DSA:2.40.50.140 1 64 4.7E-32 T 14-10-2018 Tlie_1682 0ff329e866fa85a5ad19eb0e316da520 65 SMART SM00357 2 65 1.6E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Tlie_1682 0ff329e866fa85a5ad19eb0e316da520 65 ProSitePatterns PS00352 'Cold-shock' domain signature. 14 32 - T 14-10-2018 IPR019844 Cold-shock conserved site Tlie_1682 0ff329e866fa85a5ad19eb0e316da520 65 PRINTS PR00050 Cold shock protein signature 38 56 5.6E-20 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tlie_1682 0ff329e866fa85a5ad19eb0e316da520 65 PRINTS PR00050 Cold shock protein signature 23 32 5.6E-20 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tlie_1682 0ff329e866fa85a5ad19eb0e316da520 65 PRINTS PR00050 Cold shock protein signature 3 18 5.6E-20 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tlie_1682 0ff329e866fa85a5ad19eb0e316da520 65 Pfam PF00313 'Cold-shock' DNA-binding domain 1 64 7.2E-33 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tlie_1682 0ff329e866fa85a5ad19eb0e316da520 65 SUPERFAMILY SSF50249 1 64 2.2E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_1682 0ff329e866fa85a5ad19eb0e316da520 65 PIRSF PIRSF002599 1 65 1.8E-25 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 Tlie_0676 79a4bec0ea601e814b89fc3e6767579a 119 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.977 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0676 79a4bec0ea601e814b89fc3e6767579a 119 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0676 79a4bec0ea601e814b89fc3e6767579a 119 SUPERFAMILY SSF64263 1 118 1.01E-45 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0676 79a4bec0ea601e814b89fc3e6767579a 119 Gene3D G3DSA:3.90.1030.10 1 117 1.4E-43 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0676 79a4bec0ea601e814b89fc3e6767579a 119 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 4.7E-41 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0676 79a4bec0ea601e814b89fc3e6767579a 119 Pfam PF01196 Ribosomal protein L17 20 116 3.8E-34 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0448 2eab239feaf13a02ec3c65e267d7ec03 176 Pfam PF00466 Ribosomal protein L10 6 99 6.7E-24 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Tlie_0448 2eab239feaf13a02ec3c65e267d7ec03 176 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 21 165 1.0E-4 T 14-10-2018 Tlie_0448 2eab239feaf13a02ec3c65e267d7ec03 176 Gene3D G3DSA:3.30.70.1730 1 133 4.6E-36 T 14-10-2018 Tlie_0448 2eab239feaf13a02ec3c65e267d7ec03 176 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 161 24.011 T 14-10-2018 IPR022973 Ribosomal protein L10 Tlie_0448 2eab239feaf13a02ec3c65e267d7ec03 176 SUPERFAMILY SSF160369 4 172 1.01E-50 T 14-10-2018 Tlie_0812 54c83e43eab688fc35202f0354b984a5 455 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 123 6.9E-36 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 Tlie_0812 54c83e43eab688fc35202f0354b984a5 455 Pfam PF12631 MnmE helical domain 126 452 3.4E-46 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 Tlie_0812 54c83e43eab688fc35202f0354b984a5 455 Gene3D G3DSA:3.30.1360.120 1 124 2.0E-42 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Tlie_0812 54c83e43eab688fc35202f0354b984a5 455 Gene3D G3DSA:3.40.50.300 220 383 6.4E-99 T 14-10-2018 Tlie_0812 54c83e43eab688fc35202f0354b984a5 455 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 455 31.738 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Tlie_0812 54c83e43eab688fc35202f0354b984a5 455 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 455 7.6E-114 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Tlie_0812 54c83e43eab688fc35202f0354b984a5 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 242 1.8E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_0812 54c83e43eab688fc35202f0354b984a5 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 271 286 1.8E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_0812 54c83e43eab688fc35202f0354b984a5 455 Gene3D G3DSA:1.20.120.430 125 455 6.4E-99 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 Tlie_0812 54c83e43eab688fc35202f0354b984a5 455 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 219 371 1.2E-26 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tlie_0812 54c83e43eab688fc35202f0354b984a5 455 SUPERFAMILY SSF52540 76 374 1.99E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0812 54c83e43eab688fc35202f0354b984a5 455 Pfam PF01926 50S ribosome-binding GTPase 221 334 2.9E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_0701 f0891f25d80a187a08ffb08ca9f82190 264 ProSitePatterns PS01270 Band 7 protein family signature. 141 169 - T 14-10-2018 IPR018080 Band 7/stomatin-like, conserved site Tlie_0701 f0891f25d80a187a08ffb08ca9f82190 264 Pfam PF01145 SPFH domain / Band 7 family 32 201 2.2E-36 T 14-10-2018 IPR001107 Band 7 domain Tlie_0701 f0891f25d80a187a08ffb08ca9f82190 264 PRINTS PR00721 Stomatin signature 35 57 5.2E-68 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Tlie_0701 f0891f25d80a187a08ffb08ca9f82190 264 PRINTS PR00721 Stomatin signature 82 103 5.2E-68 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Tlie_0701 f0891f25d80a187a08ffb08ca9f82190 264 PRINTS PR00721 Stomatin signature 137 160 5.2E-68 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Tlie_0701 f0891f25d80a187a08ffb08ca9f82190 264 PRINTS PR00721 Stomatin signature 161 179 5.2E-68 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Tlie_0701 f0891f25d80a187a08ffb08ca9f82190 264 PRINTS PR00721 Stomatin signature 205 228 5.2E-68 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Tlie_0701 f0891f25d80a187a08ffb08ca9f82190 264 PRINTS PR00721 Stomatin signature 117 134 5.2E-68 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Tlie_0701 f0891f25d80a187a08ffb08ca9f82190 264 PRINTS PR00721 Stomatin signature 180 201 5.2E-68 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Tlie_0701 f0891f25d80a187a08ffb08ca9f82190 264 SUPERFAMILY SSF117892 59 192 3.14E-45 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily Tlie_0701 f0891f25d80a187a08ffb08ca9f82190 264 SMART SM00244 28 185 1.7E-64 T 14-10-2018 IPR001107 Band 7 domain Tlie_0701 f0891f25d80a187a08ffb08ca9f82190 264 Gene3D G3DSA:3.30.479.30 56 187 2.6E-49 T 14-10-2018 Tlie_1202 cca0ca859f62466a56d4f410e20306d4 183 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 54 171 1.3E-19 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1202 cca0ca859f62466a56d4f410e20306d4 183 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 109 170 4.0E-6 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1202 cca0ca859f62466a56d4f410e20306d4 183 SUPERFAMILY SSF143243 45 174 9.42E-24 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1202 cca0ca859f62466a56d4f410e20306d4 183 Gene3D G3DSA:3.30.460.80 25 151 1.2E-12 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_0532 3980f2f79c370445145692be62c4a0a6 452 Pfam PF01134 Glucose inhibited division protein A 15 375 8.8E-107 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Tlie_0532 3980f2f79c370445145692be62c4a0a6 452 Gene3D G3DSA:3.50.50.60 13 188 1.9E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0532 3980f2f79c370445145692be62c4a0a6 452 Gene3D G3DSA:3.50.50.60 297 451 1.9E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0532 3980f2f79c370445145692be62c4a0a6 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 7.5E-5 T 14-10-2018 Tlie_0532 3980f2f79c370445145692be62c4a0a6 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 350 7.5E-5 T 14-10-2018 Tlie_0532 3980f2f79c370445145692be62c4a0a6 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 7.5E-5 T 14-10-2018 Tlie_0532 3980f2f79c370445145692be62c4a0a6 452 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 15 443 35.769 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 Tlie_0532 3980f2f79c370445145692be62c4a0a6 452 SUPERFAMILY SSF51905 13 375 3.98E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0532 3980f2f79c370445145692be62c4a0a6 452 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 14 441 2.2E-196 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 Tlie_1471 f09c6de150b24790244f5b2c1cca1cb1 278 Pfam PF00696 Amino acid kinase family 5 249 1.3E-24 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Tlie_1471 f09c6de150b24790244f5b2c1cca1cb1 278 Gene3D G3DSA:3.40.1160.10 4 277 1.1E-43 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tlie_1471 f09c6de150b24790244f5b2c1cca1cb1 278 SUPERFAMILY SSF53633 5 269 2.75E-32 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tlie_1471 f09c6de150b24790244f5b2c1cca1cb1 278 PIRSF PIRSF000728 4 272 1.5E-42 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tlie_1471 f09c6de150b24790244f5b2c1cca1cb1 278 PRINTS PR00474 Glutamate 5-kinase family signature 223 243 7.2E-7 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Tlie_1471 f09c6de150b24790244f5b2c1cca1cb1 278 PRINTS PR00474 Glutamate 5-kinase family signature 172 199 7.2E-7 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Tlie_0392 d90ce3a438796bb79d2675c7a1ba6189 171 Pfam PF00881 Nitroreductase family 8 63 1.2E-13 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tlie_0392 d90ce3a438796bb79d2675c7a1ba6189 171 Pfam PF00881 Nitroreductase family 68 150 3.6E-9 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tlie_0392 d90ce3a438796bb79d2675c7a1ba6189 171 SUPERFAMILY SSF55469 1 158 1.7E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tlie_0392 d90ce3a438796bb79d2675c7a1ba6189 171 Gene3D G3DSA:3.40.109.10 1 171 1.1E-47 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tlie_0424 b75be6ee16b3d5542f6bd9d5523a8e10 452 Pfam PF01523 Putative modulator of DNA gyrase 30 319 3.0E-51 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Tlie_0424 b75be6ee16b3d5542f6bd9d5523a8e10 452 SUPERFAMILY SSF111283 12 451 4.45E-97 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Tlie_0424 b75be6ee16b3d5542f6bd9d5523a8e10 452 Gene3D G3DSA:3.30.2290.10 5 227 7.7E-36 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Tlie_0379 19ec208dc279c4081eef3fb6e49f6070 589 Gene3D G3DSA:3.30.559.70 67 374 5.0E-152 T 14-10-2018 Tlie_0379 19ec208dc279c4081eef3fb6e49f6070 589 Gene3D G3DSA:3.30.559.40 4 571 5.0E-152 T 14-10-2018 Tlie_0379 19ec208dc279c4081eef3fb6e49f6070 589 ProSitePatterns PS00440 Acyltransferases ChoActase / COT / CPT family signature 2. 285 312 - T 14-10-2018 IPR000542 Acyltransferase ChoActase/COT/CPT GO:0016746 Tlie_0379 19ec208dc279c4081eef3fb6e49f6070 589 SUPERFAMILY SSF52777 3 361 8.89E-86 T 14-10-2018 Tlie_0379 19ec208dc279c4081eef3fb6e49f6070 589 SUPERFAMILY SSF52777 374 579 3.22E-51 T 14-10-2018 Tlie_0379 19ec208dc279c4081eef3fb6e49f6070 589 Pfam PF00755 Choline/Carnitine o-acyltransferase 5 577 1.8E-148 T 14-10-2018 IPR039551 Choline/carnitine acyltransferase domain Tlie_0379 19ec208dc279c4081eef3fb6e49f6070 589 ProSitePatterns PS00439 Acyltransferases ChoActase / COT / CPT family signature 1. 4 19 - T 14-10-2018 IPR000542 Acyltransferase ChoActase/COT/CPT GO:0016746 Tlie_1135 c540a4fa0a7cccb48058aefaa51c48a6 267 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 13 73 7.0E-4 T 14-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 Tlie_1135 c540a4fa0a7cccb48058aefaa51c48a6 267 SUPERFAMILY SSF46785 2 73 3.45E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1135 c540a4fa0a7cccb48058aefaa51c48a6 267 Gene3D G3DSA:1.10.10.10 1 73 4.1E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1135 c540a4fa0a7cccb48058aefaa51c48a6 267 Pfam PF09182 Bacterial purine repressor, N-terminal 5 70 2.8E-19 T 14-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 Tlie_1135 c540a4fa0a7cccb48058aefaa51c48a6 267 SUPERFAMILY SSF53271 84 236 2.1E-25 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tlie_1135 c540a4fa0a7cccb48058aefaa51c48a6 267 Pfam PF00156 Phosphoribosyl transferase domain 110 247 1.6E-11 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tlie_1135 c540a4fa0a7cccb48058aefaa51c48a6 267 Gene3D G3DSA:3.40.50.2020 75 266 1.0E-36 T 14-10-2018 Tlie_1783 43c1646335c29f9ddd99155f043a0432 251 SUPERFAMILY SSF54637 2 134 4.54E-30 T 14-10-2018 IPR029069 HotDog domain superfamily Tlie_1783 43c1646335c29f9ddd99155f043a0432 251 Gene3D G3DSA:3.10.129.10 1 248 1.2E-63 T 14-10-2018 Tlie_1783 43c1646335c29f9ddd99155f043a0432 251 Pfam PF01643 Acyl-ACP thioesterase 2 245 5.9E-50 T 14-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 Tlie_1783 43c1646335c29f9ddd99155f043a0432 251 SUPERFAMILY SSF54637 148 250 1.98E-20 T 14-10-2018 IPR029069 HotDog domain superfamily Tlie_1712 029bb62175ab29244ee8c757ba2cd7af 346 Gene3D G3DSA:3.30.1780.10 10 334 1.5E-116 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 Tlie_1712 029bb62175ab29244ee8c757ba2cd7af 346 SUPERFAMILY SSF51735 6 340 4.53E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1712 029bb62175ab29244ee8c757ba2cd7af 346 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 56 331 1.4E-76 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Tlie_1712 029bb62175ab29244ee8c757ba2cd7af 346 Gene3D G3DSA:3.40.50.720 140 313 1.5E-116 T 14-10-2018 Tlie_1712 029bb62175ab29244ee8c757ba2cd7af 346 PIRSF PIRSF001439 1 340 4.8E-83 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Tlie_1715 4513e337255881b0d2af4f0a925f3caf 227 Pfam PF08279 HTH domain 165 208 1.0E-4 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Tlie_1715 4513e337255881b0d2af4f0a925f3caf 227 SUPERFAMILY SSF52172 3 153 2.7E-35 T 14-10-2018 IPR011006 CheY-like superfamily Tlie_1715 4513e337255881b0d2af4f0a925f3caf 227 Gene3D G3DSA:3.40.50.12740 5 208 5.3E-35 T 14-10-2018 Tlie_1715 4513e337255881b0d2af4f0a925f3caf 227 PIRSF PIRSF006171 3 227 2.3E-77 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 Tlie_1715 4513e337255881b0d2af4f0a925f3caf 227 SUPERFAMILY SSF46785 163 213 1.06E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1715 4513e337255881b0d2af4f0a925f3caf 227 Pfam PF00072 Response regulator receiver domain 7 118 9.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_1715 4513e337255881b0d2af4f0a925f3caf 227 SMART SM00448 5 118 5.9E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_1314 433f644372fb27f0bef0ba89697f2ced 463 Gene3D G3DSA:3.40.640.10 91 359 3.9E-128 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1314 433f644372fb27f0bef0ba89697f2ced 463 Pfam PF02347 Glycine cleavage system P-protein 10 419 2.8E-62 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Tlie_1314 433f644372fb27f0bef0ba89697f2ced 463 Gene3D G3DSA:3.90.1150.10 80 458 3.9E-128 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1314 433f644372fb27f0bef0ba89697f2ced 463 SUPERFAMILY SSF53383 9 461 1.21E-76 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1892 82fa32323bcf6f0a8fe6a0f2aeefc666 228 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 58 210 4.7E-27 T 14-10-2018 IPR006512 YidE/YbjL duplication Tlie_1892 82fa32323bcf6f0a8fe6a0f2aeefc666 228 Pfam PF06826 Predicted Permease Membrane Region 54 222 2.0E-35 T 14-10-2018 IPR006512 YidE/YbjL duplication Tlie_0129 996f1c383e0bb725696cac8ce25f91e6 452 Pfam PF00665 Integrase core domain 143 271 2.7E-9 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tlie_0129 996f1c383e0bb725696cac8ce25f91e6 452 Gene3D G3DSA:3.30.420.10 129 314 1.7E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tlie_0129 996f1c383e0bb725696cac8ce25f91e6 452 Pfam PF13518 Helix-turn-helix domain 18 66 5.6E-7 T 14-10-2018 Tlie_0129 996f1c383e0bb725696cac8ce25f91e6 452 SUPERFAMILY SSF53098 143 303 7.28E-16 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_0129 996f1c383e0bb725696cac8ce25f91e6 452 SUPERFAMILY SSF46689 14 118 2.15E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_1803 eb7fb9e1620eb06c70f74ab52f450aa7 290 Pfam PF01988 VIT family 138 194 5.9E-9 T 14-10-2018 IPR008217 Ccc1 family Tlie_1803 eb7fb9e1620eb06c70f74ab52f450aa7 290 Gene3D G3DSA:1.20.1260.10 2 130 2.8E-7 T 14-10-2018 IPR012347 Ferritin-like Tlie_1803 eb7fb9e1620eb06c70f74ab52f450aa7 290 SUPERFAMILY SSF47240 4 129 1.67E-16 T 14-10-2018 IPR009078 Ferritin-like superfamily Tlie_1694 16cde016f9cf213878fa211f42287ac1 433 PIRSF PIRSF006066 1 432 4.2E-113 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_1694 16cde016f9cf213878fa211f42287ac1 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 420 3.1E-88 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tlie_1694 16cde016f9cf213878fa211f42287ac1 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 426 1.5E-101 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_1272 66659b58035650a82270fff923a358d5 368 SUPERFAMILY SSF55920 139 358 2.36E-65 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Tlie_1272 66659b58035650a82270fff923a358d5 368 Pfam PF01321 Creatinase/Prolidase N-terminal domain 11 136 2.2E-16 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Tlie_1272 66659b58035650a82270fff923a358d5 368 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 296 308 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Tlie_1272 66659b58035650a82270fff923a358d5 368 Pfam PF00557 Metallopeptidase family M24 146 350 4.0E-55 T 14-10-2018 IPR000994 Peptidase M24 Tlie_1272 66659b58035650a82270fff923a358d5 368 Gene3D G3DSA:3.40.350.10 10 136 2.4E-27 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Tlie_1272 66659b58035650a82270fff923a358d5 368 Gene3D G3DSA:3.90.230.10 139 362 9.4E-71 T 14-10-2018 Tlie_1272 66659b58035650a82270fff923a358d5 368 SUPERFAMILY SSF53092 7 136 1.01E-15 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Tlie_1837 1d002a904fa59eaa7570297585eadd1f 292 Pfam PF13714 Phosphoenolpyruvate phosphomutase 8 251 2.4E-57 T 14-10-2018 Tlie_1837 1d002a904fa59eaa7570297585eadd1f 292 Gene3D G3DSA:3.20.20.60 1 290 3.6E-111 T 14-10-2018 Tlie_1837 1d002a904fa59eaa7570297585eadd1f 292 SUPERFAMILY SSF51621 2 288 2.24E-99 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tlie_1837 1d002a904fa59eaa7570297585eadd1f 292 ProSitePatterns PS00161 Isocitrate lyase signature. 118 123 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 Tlie_1148 52d7f4474dd566d5dd03dfccfd2954b9 460 PIRSF PIRSF000485 1 459 4.2E-172 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Tlie_1148 52d7f4474dd566d5dd03dfccfd2954b9 460 SUPERFAMILY SSF56235 2 246 1.72E-66 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tlie_1148 52d7f4474dd566d5dd03dfccfd2954b9 460 Gene3D G3DSA:3.60.20.10 2 449 4.5E-151 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tlie_1148 52d7f4474dd566d5dd03dfccfd2954b9 460 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 449 4.5E-154 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Tlie_1148 52d7f4474dd566d5dd03dfccfd2954b9 460 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 449 45.779 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Tlie_1148 52d7f4474dd566d5dd03dfccfd2954b9 460 Pfam PF13537 Glutamine amidotransferase domain 89 204 2.8E-23 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Tlie_1148 52d7f4474dd566d5dd03dfccfd2954b9 460 Gene3D G3DSA:3.40.50.2020 267 432 4.5E-151 T 14-10-2018 Tlie_1148 52d7f4474dd566d5dd03dfccfd2954b9 460 SUPERFAMILY SSF53271 243 455 1.8E-66 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tlie_1148 52d7f4474dd566d5dd03dfccfd2954b9 460 Pfam PF00156 Phosphoribosyl transferase domain 281 379 4.5E-7 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tlie_1723 4608273e6d1d0872dbb03fb3c9e64416 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 283 1.1E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tlie_0247 25063ce8d1fae6b84a92e84702530966 95 Gene3D G3DSA:3.30.70.240 7 72 5.6E-22 T 14-10-2018 Tlie_0247 25063ce8d1fae6b84a92e84702530966 95 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 11 78 8.9E-8 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Tlie_0247 25063ce8d1fae6b84a92e84702530966 95 SUPERFAMILY SSF143430 9 84 5.36E-19 T 14-10-2018 Tlie_0247 25063ce8d1fae6b84a92e84702530966 95 Pfam PF09827 CRISPR associated protein Cas2 10 72 1.8E-13 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Tlie_0247 25063ce8d1fae6b84a92e84702530966 95 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 7 93 9.723 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Tlie_0770 a7330d2dea950391131519541c6c7b3d 192 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 180 8.3E-53 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Tlie_0770 a7330d2dea950391131519541c6c7b3d 192 Gene3D G3DSA:3.40.50.1470 1 190 6.5E-57 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Tlie_0770 a7330d2dea950391131519541c6c7b3d 192 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 179 30.959 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Tlie_0770 a7330d2dea950391131519541c6c7b3d 192 SUPERFAMILY SSF53178 2 188 1.05E-55 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Tlie_0770 a7330d2dea950391131519541c6c7b3d 192 Pfam PF01195 Peptidyl-tRNA hydrolase 3 183 9.2E-49 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Tlie_0770 a7330d2dea950391131519541c6c7b3d 192 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Tlie_0386 bfbae1153fbf08ebccdc99a580b4d7c3 503 Pfam PF00982 Glycosyltransferase family 20 9 473 1.8E-145 T 14-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 Tlie_0386 bfbae1153fbf08ebccdc99a580b4d7c3 503 SUPERFAMILY SSF53756 9 473 1.99E-141 T 14-10-2018 Tlie_0386 bfbae1153fbf08ebccdc99a580b4d7c3 503 Gene3D G3DSA:3.40.50.2000 32 472 3.3E-166 T 14-10-2018 Tlie_0386 bfbae1153fbf08ebccdc99a580b4d7c3 503 Gene3D G3DSA:3.40.50.2000 253 461 3.3E-166 T 14-10-2018 Tlie_0721 0e7d1c56db40fbee6d8357e505fe4ef2 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 1.4E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tlie_0721 0e7d1c56db40fbee6d8357e505fe4ef2 225 SMART SM00862 145 220 2.1E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tlie_0721 0e7d1c56db40fbee6d8357e505fe4ef2 225 SMART SM00448 1 112 3.1E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0721 0e7d1c56db40fbee6d8357e505fe4ef2 225 Gene3D G3DSA:3.40.50.2300 1 121 4.2E-41 T 14-10-2018 Tlie_0721 0e7d1c56db40fbee6d8357e505fe4ef2 225 Pfam PF00072 Response regulator receiver domain 3 113 6.4E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0721 0e7d1c56db40fbee6d8357e505fe4ef2 225 SUPERFAMILY SSF52172 1 178 9.08E-42 T 14-10-2018 IPR011006 CheY-like superfamily Tlie_0721 0e7d1c56db40fbee6d8357e505fe4ef2 225 Gene3D G3DSA:1.10.10.10 122 221 1.3E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1019 f357c69b8c67a61037b4891deccfffe6 237 Pfam PF00005 ABC transporter 20 162 1.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1019 f357c69b8c67a61037b4891deccfffe6 237 SMART SM00382 28 216 4.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1019 f357c69b8c67a61037b4891deccfffe6 237 Gene3D G3DSA:3.40.50.300 2 237 6.0E-64 T 14-10-2018 Tlie_1019 f357c69b8c67a61037b4891deccfffe6 237 SUPERFAMILY SSF52540 2 235 7.38E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1378 72c60ceaeb316f5b76a703e74c683e8d 267 Pfam PF02673 Bacitracin resistance protein BacA 5 258 6.5E-67 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Tlie_1378 72c60ceaeb316f5b76a703e74c683e8d 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 263 13.886 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Tlie_0436 903bf9b50e2ebfc5e0036ec972dbabbd 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 265 3.9E-28 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tlie_0436 903bf9b50e2ebfc5e0036ec972dbabbd 349 Gene3D G3DSA:1.10.287.470 100 158 1.1E-63 T 14-10-2018 Tlie_0436 903bf9b50e2ebfc5e0036ec972dbabbd 349 Gene3D G3DSA:2.40.50.100 65 192 1.1E-63 T 14-10-2018 Tlie_0436 903bf9b50e2ebfc5e0036ec972dbabbd 349 SUPERFAMILY SSF111369 55 272 1.15E-27 T 14-10-2018 Tlie_0436 903bf9b50e2ebfc5e0036ec972dbabbd 349 Gene3D G3DSA:2.40.30.170 53 271 1.1E-63 T 14-10-2018 Tlie_0436 903bf9b50e2ebfc5e0036ec972dbabbd 349 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 346 5.2E-57 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tlie_0436 903bf9b50e2ebfc5e0036ec972dbabbd 349 Gene3D G3DSA:2.40.420.20 45 331 1.1E-63 T 14-10-2018 Tlie_0752 aa971f7e5622d78eedbc236b558d3abf 577 Gene3D G3DSA:1.10.8.60 8 231 3.3E-99 T 14-10-2018 Tlie_0752 aa971f7e5622d78eedbc236b558d3abf 577 Pfam PF13177 DNA polymerase III, delta subunit 20 179 1.7E-44 T 14-10-2018 Tlie_0752 aa971f7e5622d78eedbc236b558d3abf 577 SUPERFAMILY SSF52540 31 227 2.26E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0752 aa971f7e5622d78eedbc236b558d3abf 577 Gene3D G3DSA:3.40.50.300 13 178 3.3E-99 T 14-10-2018 Tlie_0752 aa971f7e5622d78eedbc236b558d3abf 577 SMART SM00382 37 180 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0752 aa971f7e5622d78eedbc236b558d3abf 577 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 4 345 6.2E-119 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Tlie_0752 aa971f7e5622d78eedbc236b558d3abf 577 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 125 143 1.3E-6 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tlie_0752 aa971f7e5622d78eedbc236b558d3abf 577 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.3E-6 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tlie_0511 e1ef66d2deadd2dfbd3f4dbd0b1a6c44 365 PIRSF PIRSF001439 1 353 1.7E-71 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Tlie_0511 e1ef66d2deadd2dfbd3f4dbd0b1a6c44 365 SUPERFAMILY SSF51735 4 356 1.29E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0511 e1ef66d2deadd2dfbd3f4dbd0b1a6c44 365 Gene3D G3DSA:3.30.1780.10 10 348 2.1E-112 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 Tlie_0511 e1ef66d2deadd2dfbd3f4dbd0b1a6c44 365 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 90 344 4.4E-57 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Tlie_0511 e1ef66d2deadd2dfbd3f4dbd0b1a6c44 365 Gene3D G3DSA:3.40.50.720 154 326 2.1E-112 T 14-10-2018 Tlie_0572 047e20fe51ac159cb710025201043696 456 SUPERFAMILY SSF56935 126 451 3.05E-10 T 14-10-2018 Tlie_0572 047e20fe51ac159cb710025201043696 456 Pfam PF00395 S-layer homology domain 25 68 4.8E-10 T 14-10-2018 IPR001119 S-layer homology domain Tlie_1881 960740b82a3c9ce9fe6229da2cacccdc 323 Gene3D G3DSA:3.40.50.1100 13 312 6.2E-106 T 14-10-2018 Tlie_1881 960740b82a3c9ce9fe6229da2cacccdc 323 Gene3D G3DSA:3.40.50.1100 53 152 6.2E-106 T 14-10-2018 Tlie_1881 960740b82a3c9ce9fe6229da2cacccdc 323 SUPERFAMILY SSF53686 7 316 4.45E-83 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tlie_1881 960740b82a3c9ce9fe6229da2cacccdc 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 308 1.0E-72 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tlie_1650 538ee142cbacfa42492213ac77cce9dc 140 Pfam PF03061 Thioesterase superfamily 40 108 7.0E-7 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Tlie_1650 538ee142cbacfa42492213ac77cce9dc 140 SUPERFAMILY SSF54637 7 130 4.73E-32 T 14-10-2018 IPR029069 HotDog domain superfamily Tlie_1650 538ee142cbacfa42492213ac77cce9dc 140 PIRSF PIRSF014972 6 137 1.0E-28 T 14-10-2018 IPR025540 Fluoroacetyl-CoA thioesterase Tlie_1650 538ee142cbacfa42492213ac77cce9dc 140 Gene3D G3DSA:3.10.129.10 1 135 3.4E-43 T 14-10-2018 Tlie_1235 74feb8f207c761d1536a172ffea33fc4 192 Pfam PF13242 HAD-hyrolase-like 107 179 2.8E-16 T 14-10-2018 Tlie_1235 74feb8f207c761d1536a172ffea33fc4 192 Gene3D G3DSA:3.40.50.1000 1 185 1.3E-62 T 14-10-2018 IPR023214 HAD superfamily Tlie_1235 74feb8f207c761d1536a172ffea33fc4 192 PIRSF PIRSF004682 1 189 3.3E-62 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 Tlie_1235 74feb8f207c761d1536a172ffea33fc4 192 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 165 2.5E-47 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 Tlie_1235 74feb8f207c761d1536a172ffea33fc4 192 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 65 1.8E-6 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Tlie_1235 74feb8f207c761d1536a172ffea33fc4 192 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 153 9.5E-44 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 Tlie_1235 74feb8f207c761d1536a172ffea33fc4 192 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 2.7E-36 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Tlie_1235 74feb8f207c761d1536a172ffea33fc4 192 SUPERFAMILY SSF56784 1 176 3.47E-49 T 14-10-2018 IPR036412 HAD-like superfamily Tlie_1896 ad8135ab19de4d543c06e6be19dfcb52 279 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 94 2.2E-29 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Tlie_1896 ad8135ab19de4d543c06e6be19dfcb52 279 Gene3D G3DSA:3.40.50.10860 10 270 4.3E-72 T 14-10-2018 Tlie_1896 ad8135ab19de4d543c06e6be19dfcb52 279 Gene3D G3DSA:3.40.50.720 106 247 4.3E-72 T 14-10-2018 Tlie_1896 ad8135ab19de4d543c06e6be19dfcb52 279 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 121 168 6.2E-6 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Tlie_1896 ad8135ab19de4d543c06e6be19dfcb52 279 SUPERFAMILY SSF53223 3 106 6.33E-34 T 14-10-2018 Tlie_1896 ad8135ab19de4d543c06e6be19dfcb52 279 SUPERFAMILY SSF51735 121 277 2.66E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1896 ad8135ab19de4d543c06e6be19dfcb52 279 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 279 29.867 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Tlie_1896 ad8135ab19de4d543c06e6be19dfcb52 279 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 276 9.0E-68 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Tlie_0482 a3fee252de203f4f36a511d56a270029 320 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 40 315 2.0E-56 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Tlie_0482 a3fee252de203f4f36a511d56a270029 320 Gene3D G3DSA:3.40.190.120 144 257 1.1E-91 T 14-10-2018 Tlie_0482 a3fee252de203f4f36a511d56a270029 320 Gene3D G3DSA:3.40.190.10 42 317 1.1E-91 T 14-10-2018 Tlie_0482 a3fee252de203f4f36a511d56a270029 320 SUPERFAMILY SSF53850 40 318 1.25E-56 T 14-10-2018 Tlie_0374 5f5e74670fdd4ba1260cf2c0cc4dc736 245 Gene3D G3DSA:1.10.10.10 4 75 1.1E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0374 5f5e74670fdd4ba1260cf2c0cc4dc736 245 Pfam PF01614 Bacterial transcriptional regulator 128 241 4.2E-19 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Tlie_0374 5f5e74670fdd4ba1260cf2c0cc4dc736 245 SUPERFAMILY SSF55781 78 244 2.55E-37 T 14-10-2018 Tlie_0374 5f5e74670fdd4ba1260cf2c0cc4dc736 245 SUPERFAMILY SSF46785 10 78 1.31E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_0374 5f5e74670fdd4ba1260cf2c0cc4dc736 245 Gene3D G3DSA:3.30.450.40 80 241 5.3E-42 T 14-10-2018 IPR029016 GAF-like domain superfamily Tlie_0374 5f5e74670fdd4ba1260cf2c0cc4dc736 245 Pfam PF09339 IclR helix-turn-helix domain 11 61 1.4E-10 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Tlie_0374 5f5e74670fdd4ba1260cf2c0cc4dc736 245 SMART SM00346 8 98 1.6E-10 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Tlie_1662 6d8ffef6a042381c233c9c11d2cbb134 551 Gene3D G3DSA:3.40.630.10 6 230 6.7E-34 T 14-10-2018 Tlie_1662 6d8ffef6a042381c233c9c11d2cbb134 551 PIRSF PIRSF010386 1 549 6.2E-140 T 14-10-2018 IPR012166 Uncharacterised protein family RocB Tlie_1662 6d8ffef6a042381c233c9c11d2cbb134 551 SUPERFAMILY SSF53187 8 534 7.86E-29 T 14-10-2018 Tlie_1662 6d8ffef6a042381c233c9c11d2cbb134 551 Pfam PF01546 Peptidase family M20/M25/M40 83 530 1.2E-10 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tlie_0759 c12a2f703656b4870ab3e4896835b9ed 285 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 10 245 1.2E-68 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 Tlie_0759 c12a2f703656b4870ab3e4896835b9ed 285 PIRSF PIRSF004793 1 263 1.3E-81 T 14-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 Tlie_0759 c12a2f703656b4870ab3e4896835b9ed 285 Gene3D G3DSA:3.40.1700.10 96 248 2.6E-54 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Tlie_0759 c12a2f703656b4870ab3e4896835b9ed 285 SUPERFAMILY SSF143597 36 233 2.62E-59 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Tlie_0759 c12a2f703656b4870ab3e4896835b9ed 285 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 112 229 3.7E-39 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal Tlie_0759 c12a2f703656b4870ab3e4896835b9ed 285 Hamap MF_01499 Diadenylate cyclase [dacA]. 1 248 32.158 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 Tlie_0538 8963635e4d7396a3a62861555a759b7f 199 Pfam PF04417 Protein of unknown function (DUF501) 46 171 8.0E-28 T 14-10-2018 IPR007511 Protein of unknown function DUF501 Tlie_1300 6c0226bc4c69f34e8130a59685435ce5 509 SMART SM00471 321 427 3.5E-13 T 14-10-2018 IPR003607 HD/PDEase domain Tlie_1300 6c0226bc4c69f34e8130a59685435ce5 509 SUPERFAMILY SSF54791 196 291 3.57E-14 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Tlie_1300 6c0226bc4c69f34e8130a59685435ce5 509 Gene3D G3DSA:3.30.1370.10 197 298 3.1E-6 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Tlie_1300 6c0226bc4c69f34e8130a59685435ce5 509 Gene3D G3DSA:1.10.3210.10 309 465 5.3E-22 T 14-10-2018 Tlie_1300 6c0226bc4c69f34e8130a59685435ce5 509 Pfam PF12072 Domain of unknown function (DUF3552) 5 194 6.1E-51 T 14-10-2018 IPR022711 Ribonuclease Y, N-terminal Tlie_1300 6c0226bc4c69f34e8130a59685435ce5 509 Pfam PF01966 HD domain 325 417 4.2E-20 T 14-10-2018 IPR006674 HD domain Tlie_1300 6c0226bc4c69f34e8130a59685435ce5 509 SMART SM00322 197 289 0.0041 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Tlie_1300 6c0226bc4c69f34e8130a59685435ce5 509 Pfam PF00013 KH domain 203 240 3.1E-5 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Tlie_1300 6c0226bc4c69f34e8130a59685435ce5 509 TIGRFAM TIGR00277 HDIG: HDIG domain 321 398 1.0E-22 T 14-10-2018 IPR006675 HDIG domain Tlie_1300 6c0226bc4c69f34e8130a59685435ce5 509 SUPERFAMILY SSF109604 305 456 8.3E-30 T 14-10-2018 Tlie_1300 6c0226bc4c69f34e8130a59685435ce5 509 Hamap MF_00335 Ribonuclease Y [rny]. 1 509 25.013 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 Tlie_1300 6c0226bc4c69f34e8130a59685435ce5 509 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 5 509 1.9E-220 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 Tlie_1061 7585d3fa8d6c6175959b129d62ba92c5 321 SUPERFAMILY SSF51735 2 160 3.9E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1061 7585d3fa8d6c6175959b129d62ba92c5 321 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 122 5.1E-31 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Tlie_1061 7585d3fa8d6c6175959b129d62ba92c5 321 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 158 215 6.6E-5 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Tlie_1061 7585d3fa8d6c6175959b129d62ba92c5 321 Gene3D G3DSA:3.30.360.10 123 303 1.9E-73 T 14-10-2018 Tlie_1061 7585d3fa8d6c6175959b129d62ba92c5 321 SUPERFAMILY SSF55347 129 290 6.21E-16 T 14-10-2018 Tlie_1061 7585d3fa8d6c6175959b129d62ba92c5 321 Gene3D G3DSA:3.40.50.720 4 290 1.9E-73 T 14-10-2018 Tlie_1170 30db5c21cccb8574ea1c72d0935a63d0 262 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 242 2.6E-73 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Tlie_1170 30db5c21cccb8574ea1c72d0935a63d0 262 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 259 37.696 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Tlie_1170 30db5c21cccb8574ea1c72d0935a63d0 262 Pfam PF01975 Survival protein SurE 4 193 3.7E-59 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Tlie_1170 30db5c21cccb8574ea1c72d0935a63d0 262 SUPERFAMILY SSF64167 1 253 1.1E-79 T 14-10-2018 Tlie_1170 30db5c21cccb8574ea1c72d0935a63d0 262 Gene3D G3DSA:3.40.1210.10 1 260 4.5E-83 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Tlie_1113 a6599264785b4326cfd31c8992b4c1f0 309 SUPERFAMILY SSF53335 23 192 7.03E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_1113 a6599264785b4326cfd31c8992b4c1f0 309 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 21 192 3.1E-34 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Tlie_1113 a6599264785b4326cfd31c8992b4c1f0 309 Pfam PF02390 Putative methyltransferase 25 188 1.7E-37 T 14-10-2018 Tlie_1113 a6599264785b4326cfd31c8992b4c1f0 309 Gene3D G3DSA:3.40.50.150 8 202 8.6E-48 T 14-10-2018 Tlie_1113 a6599264785b4326cfd31c8992b4c1f0 309 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 194 23.67 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Tlie_0113 05c30b7215fc957efd94365bf2287441 370 PRINTS PR01010 Flagellar P-ring protein signature 257 269 3.8E-69 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tlie_0113 05c30b7215fc957efd94365bf2287441 370 PRINTS PR01010 Flagellar P-ring protein signature 167 185 3.8E-69 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tlie_0113 05c30b7215fc957efd94365bf2287441 370 PRINTS PR01010 Flagellar P-ring protein signature 88 107 3.8E-69 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tlie_0113 05c30b7215fc957efd94365bf2287441 370 PRINTS PR01010 Flagellar P-ring protein signature 127 145 3.8E-69 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tlie_0113 05c30b7215fc957efd94365bf2287441 370 PRINTS PR01010 Flagellar P-ring protein signature 31 46 3.8E-69 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tlie_0113 05c30b7215fc957efd94365bf2287441 370 PRINTS PR01010 Flagellar P-ring protein signature 46 61 3.8E-69 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tlie_0113 05c30b7215fc957efd94365bf2287441 370 PRINTS PR01010 Flagellar P-ring protein signature 110 127 3.8E-69 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tlie_0113 05c30b7215fc957efd94365bf2287441 370 PRINTS PR01010 Flagellar P-ring protein signature 193 211 3.8E-69 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tlie_0113 05c30b7215fc957efd94365bf2287441 370 PRINTS PR01010 Flagellar P-ring protein signature 63 78 3.8E-69 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tlie_0113 05c30b7215fc957efd94365bf2287441 370 Pfam PF02119 Flagellar P-ring protein 31 369 4.5E-131 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tlie_0113 05c30b7215fc957efd94365bf2287441 370 Hamap MF_00416 Flagellar P-ring protein [flgI]. 6 370 34.168 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tlie_1561 02c08e7b0ccfe42e5a536afc1a53cdb0 181 TIGRFAM TIGR00277 HDIG: HDIG domain 58 149 1.7E-7 T 14-10-2018 IPR006675 HDIG domain Tlie_1561 02c08e7b0ccfe42e5a536afc1a53cdb0 181 SUPERFAMILY SSF109604 53 170 3.66E-13 T 14-10-2018 Tlie_1561 02c08e7b0ccfe42e5a536afc1a53cdb0 181 Pfam PF01966 HD domain 59 167 1.3E-8 T 14-10-2018 IPR006674 HD domain Tlie_1561 02c08e7b0ccfe42e5a536afc1a53cdb0 181 Gene3D G3DSA:1.10.3210.10 50 178 8.2E-11 T 14-10-2018 Tlie_1386 2612d8d0d7d9d1263a1c1d7f64afafe2 587 Pfam PF09992 Phosphodiester glycosidase 415 587 3.0E-31 T 14-10-2018 IPR018711 Phosphodiester glycosidase Tlie_1323 53cf539917c7c867e1041e1469e8a0a9 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 12 79 5.3E-33 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1323 53cf539917c7c867e1041e1469e8a0a9 79 Gene3D G3DSA:4.10.640.10 2 79 1.3E-33 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1323 53cf539917c7c867e1041e1469e8a0a9 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 35 79 3.0E-14 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1323 53cf539917c7c867e1041e1469e8a0a9 79 PRINTS PR00974 Ribosomal protein S18 family signature 66 76 3.8E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1323 53cf539917c7c867e1041e1469e8a0a9 79 PRINTS PR00974 Ribosomal protein S18 family signature 44 51 3.8E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1323 53cf539917c7c867e1041e1469e8a0a9 79 PRINTS PR00974 Ribosomal protein S18 family signature 34 44 3.8E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1323 53cf539917c7c867e1041e1469e8a0a9 79 PRINTS PR00974 Ribosomal protein S18 family signature 52 66 3.8E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1323 53cf539917c7c867e1041e1469e8a0a9 79 Pfam PF01084 Ribosomal protein S18 23 74 1.7E-29 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1323 53cf539917c7c867e1041e1469e8a0a9 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 27 50 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1323 53cf539917c7c867e1041e1469e8a0a9 79 SUPERFAMILY SSF46911 6 78 1.31E-31 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1323 53cf539917c7c867e1041e1469e8a0a9 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 7 79 22.784 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1145 424b1866d288c77cf26f107a1e7d6c20 84 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 3 80 19.89 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tlie_1145 424b1866d288c77cf26f107a1e7d6c20 84 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 11 80 2.0E-14 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tlie_1145 424b1866d288c77cf26f107a1e7d6c20 84 Gene3D G3DSA:3.30.1280.10 2 84 5.1E-28 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tlie_1145 424b1866d288c77cf26f107a1e7d6c20 84 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 3 81 1.7E-25 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tlie_1145 424b1866d288c77cf26f107a1e7d6c20 84 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 5 80 1.5E-28 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tlie_1145 424b1866d288c77cf26f107a1e7d6c20 84 SUPERFAMILY SSF82697 2 79 1.67E-26 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tlie_0197 6f2e3016c2c36275b3e7474cd55044ac 222 Gene3D G3DSA:3.40.50.10150 43 220 1.8E-74 T 14-10-2018 IPR010254 B12-dependent dehydratases, beta subunit Tlie_0197 6f2e3016c2c36275b3e7474cd55044ac 222 Pfam PF02288 Dehydratase medium subunit 65 177 1.3E-34 T 14-10-2018 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor Tlie_0197 6f2e3016c2c36275b3e7474cd55044ac 222 SUPERFAMILY SSF52968 44 218 5.36E-60 T 14-10-2018 IPR010254 B12-dependent dehydratases, beta subunit Tlie_1898 ccc79d0e3bb3ebe7bd9567574327fce2 295 Pfam PF02153 Prephenate dehydrogenase 20 246 4.4E-39 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Tlie_1898 ccc79d0e3bb3ebe7bd9567574327fce2 295 SUPERFAMILY SSF48179 176 281 9.3E-16 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tlie_1898 ccc79d0e3bb3ebe7bd9567574327fce2 295 Gene3D G3DSA:3.40.50.720 3 173 1.6E-44 T 14-10-2018 Tlie_1898 ccc79d0e3bb3ebe7bd9567574327fce2 295 Gene3D G3DSA:1.10.3660.10 176 283 4.4E-17 T 14-10-2018 Tlie_1898 ccc79d0e3bb3ebe7bd9567574327fce2 295 SUPERFAMILY SSF51735 8 170 2.76E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1034 e6d087a3077faa1c8158c035e0bf7711 250 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 35.824 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tlie_1034 e6d087a3077faa1c8158c035e0bf7711 250 SUPERFAMILY SSF75625 5 246 2.88E-94 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tlie_1034 e6d087a3077faa1c8158c035e0bf7711 250 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 5.0E-99 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tlie_1034 e6d087a3077faa1c8158c035e0bf7711 250 Gene3D G3DSA:1.10.10.200 1 79 1.8E-33 T 14-10-2018 IPR017856 Integrase-like, N-terminal Tlie_1034 e6d087a3077faa1c8158c035e0bf7711 250 Gene3D G3DSA:3.30.70.980 84 237 1.7E-56 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tlie_1034 e6d087a3077faa1c8158c035e0bf7711 250 Pfam PF01709 Transcriptional regulator 5 238 2.6E-95 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tlie_1034 e6d087a3077faa1c8158c035e0bf7711 250 Gene3D G3DSA:3.30.70.980 133 205 1.7E-56 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tlie_0161 4264ba1adbdd992b98676396a4b70372 308 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 3 276 1.1E-70 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Tlie_0161 4264ba1adbdd992b98676396a4b70372 308 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 308 97.054 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Tlie_0161 4264ba1adbdd992b98676396a4b70372 308 Pfam PF03186 CobD/Cbib protein 1 290 2.5E-102 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Tlie_0447 37089f536c13bc7860043b15573d9f7d 235 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0447 37089f536c13bc7860043b15573d9f7d 235 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 1.4E-100 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Tlie_0447 37089f536c13bc7860043b15573d9f7d 235 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.398 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Tlie_0447 37089f536c13bc7860043b15573d9f7d 235 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 2.2E-48 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Tlie_0447 37089f536c13bc7860043b15573d9f7d 235 PIRSF PIRSF002155 1 227 3.2E-75 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0447 37089f536c13bc7860043b15573d9f7d 235 Gene3D G3DSA:3.30.190.20 21 225 6.2E-78 T 14-10-2018 Tlie_0447 37089f536c13bc7860043b15573d9f7d 235 SUPERFAMILY SSF56808 6 225 6.67E-80 T 14-10-2018 IPR023674 Ribosomal protein L1-like Tlie_0447 37089f536c13bc7860043b15573d9f7d 235 Gene3D G3DSA:3.40.50.790 68 159 6.2E-78 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Tlie_1522 228ba0b9765b586116401a6d70c453c6 453 Gene3D G3DSA:3.30.70.270 295 434 5.4E-13 T 14-10-2018 Tlie_1522 228ba0b9765b586116401a6d70c453c6 453 Pfam PF00990 Diguanylate cyclase, GGDEF domain 306 417 3.5E-6 T 14-10-2018 IPR000160 GGDEF domain Tlie_1522 228ba0b9765b586116401a6d70c453c6 453 SUPERFAMILY SSF55073 311 416 4.71E-7 T 14-10-2018 IPR029787 Nucleotide cyclase Tlie_0275 5fae74bcc17cafada3f4e315537cef9d 390 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 29 383 3.3E-31 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tlie_0275 5fae74bcc17cafada3f4e315537cef9d 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 272 9.5E-17 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tlie_0275 5fae74bcc17cafada3f4e315537cef9d 390 SUPERFAMILY SSF111369 43 263 3.01E-6 T 14-10-2018 Tlie_0275 5fae74bcc17cafada3f4e315537cef9d 390 Gene3D G3DSA:2.40.30.170 42 309 6.7E-51 T 14-10-2018 Tlie_0275 5fae74bcc17cafada3f4e315537cef9d 390 Gene3D G3DSA:2.40.420.20 37 368 6.7E-51 T 14-10-2018 Tlie_0275 5fae74bcc17cafada3f4e315537cef9d 390 Gene3D G3DSA:1.10.287.470 87 192 6.7E-51 T 14-10-2018 Tlie_0275 5fae74bcc17cafada3f4e315537cef9d 390 Gene3D G3DSA:2.40.50.100 53 227 6.7E-51 T 14-10-2018 Tlie_1821 16f3c900dc00cc250565cb253d32f285 193 SUPERFAMILY SSF51161 17 192 4.57E-27 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Tlie_1821 16f3c900dc00cc250565cb253d32f285 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 138 173 4.7E-11 T 14-10-2018 IPR001451 Hexapeptide repeat Tlie_1821 16f3c900dc00cc250565cb253d32f285 193 Gene3D G3DSA:2.160.10.10 72 193 1.1E-29 T 14-10-2018 Tlie_1093 b84a78431e36002b51adf4d169c72087 307 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 7 304 3.8E-82 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Tlie_1093 b84a78431e36002b51adf4d169c72087 307 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 242 262 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Tlie_1093 b84a78431e36002b51adf4d169c72087 307 Gene3D G3DSA:3.20.20.70 3 306 3.0E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1093 b84a78431e36002b51adf4d169c72087 307 Pfam PF01180 Dihydroorotate dehydrogenase 7 289 6.2E-50 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Tlie_1093 b84a78431e36002b51adf4d169c72087 307 PIRSF PIRSF000164 2 306 3.8E-59 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Tlie_1093 b84a78431e36002b51adf4d169c72087 307 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 7 304 30.903 T 14-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 Tlie_1093 b84a78431e36002b51adf4d169c72087 307 SUPERFAMILY SSF51395 6 304 3.97E-67 T 14-10-2018 Tlie_1727 554aa830fd6e2ebd4f04dad816dfd75f 328 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 5.1E-12 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tlie_1727 554aa830fd6e2ebd4f04dad816dfd75f 328 PRINTS PR00102 Ornithine carbamoyltransferase signature 128 142 5.1E-12 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tlie_1727 554aa830fd6e2ebd4f04dad816dfd75f 328 PRINTS PR00102 Ornithine carbamoyltransferase signature 304 315 5.1E-12 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tlie_1727 554aa830fd6e2ebd4f04dad816dfd75f 328 Gene3D G3DSA:3.40.50.1370 8 322 5.5E-108 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tlie_1727 554aa830fd6e2ebd4f04dad816dfd75f 328 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tlie_1727 554aa830fd6e2ebd4f04dad816dfd75f 328 SUPERFAMILY SSF53671 5 327 1.31E-83 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tlie_1727 554aa830fd6e2ebd4f04dad816dfd75f 328 Gene3D G3DSA:3.40.50.1370 155 321 5.5E-108 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tlie_1727 554aa830fd6e2ebd4f04dad816dfd75f 328 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 278 287 1.3E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tlie_1727 554aa830fd6e2ebd4f04dad816dfd75f 328 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.3E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tlie_1727 554aa830fd6e2ebd4f04dad816dfd75f 328 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 139 150 1.3E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tlie_1727 554aa830fd6e2ebd4f04dad816dfd75f 328 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 290 313 1.3E-23 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tlie_1727 554aa830fd6e2ebd4f04dad816dfd75f 328 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 160 323 2.4E-43 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Tlie_1727 554aa830fd6e2ebd4f04dad816dfd75f 328 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 152 2.4E-41 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 413 480 8.2E-19 T 14-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 100 268 4.6E-17 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 SUPERFAMILY SSF64586 408 480 9.61E-19 T 14-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 6 480 1.2E-167 T 14-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 Gene3D G3DSA:3.30.110.30 407 480 4.5E-20 T 14-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 PRINTS PR01046 Prolyl-tRNA synthetase signature 63 81 2.4E-8 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-8 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-8 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 PRINTS PR01046 Prolyl-tRNA synthetase signature 143 154 2.4E-8 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 SUPERFAMILY SSF52954 276 405 1.64E-20 T 14-10-2018 Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 SUPERFAMILY SSF55681 9 273 5.24E-77 T 14-10-2018 Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 SMART SM00946 413 480 4.7E-26 T 14-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 Gene3D G3DSA:3.40.50.800 281 404 1.3E-21 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 Pfam PF03129 Anticodon binding domain 287 386 1.2E-11 T 14-10-2018 IPR004154 Anticodon-binding Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 Gene3D G3DSA:3.30.930.10 1 280 5.3E-105 T 14-10-2018 Tlie_0417 cbfd536a217fb41d5962178d193b6e72 480 Hamap MF_01571 Proline--tRNA ligase [proS]. 5 480 42.758 T 14-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Tlie_0004 6ea84e4fb093d10758510d2b16330f5a 635 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Tlie_0004 6ea84e4fb093d10758510d2b16330f5a 635 Gene3D G3DSA:1.10.10.1800 459 549 3.1E-21 T 14-10-2018 Tlie_0004 6ea84e4fb093d10758510d2b16330f5a 635 Gene3D G3DSA:1.10.150.570 568 621 2.7E-23 T 14-10-2018 Tlie_0004 6ea84e4fb093d10758510d2b16330f5a 635 Pfam PF01134 Glucose inhibited division protein A 9 399 9.0E-153 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Tlie_0004 6ea84e4fb093d10758510d2b16330f5a 635 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 621 2.4E-257 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Tlie_0004 6ea84e4fb093d10758510d2b16330f5a 635 Pfam PF13932 GidA associated domain 401 614 5.0E-78 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 Tlie_0004 6ea84e4fb093d10758510d2b16330f5a 635 SMART SM01228 545 616 3.4E-43 T 14-10-2018 Tlie_0004 6ea84e4fb093d10758510d2b16330f5a 635 SUPERFAMILY SSF51905 7 261 2.53E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0004 6ea84e4fb093d10758510d2b16330f5a 635 Gene3D G3DSA:3.50.50.60 2 240 7.1E-78 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0004 6ea84e4fb093d10758510d2b16330f5a 635 Gene3D G3DSA:3.50.50.60 321 458 1.4E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_0004 6ea84e4fb093d10758510d2b16330f5a 635 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Tlie_0004 6ea84e4fb093d10758510d2b16330f5a 635 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 623 40.003 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Tlie_1849 148dda549d4ff077042118add4c9059d 501 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 2 485 1.2E-125 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Tlie_1849 148dda549d4ff077042118add4c9059d 501 SUPERFAMILY SSF103473 2 491 4.84E-70 T 14-10-2018 IPR036259 MFS transporter superfamily Tlie_1849 148dda549d4ff077042118add4c9059d 501 Gene3D G3DSA:1.20.1720.10 1 198 1.2E-45 T 14-10-2018 Tlie_1849 148dda549d4ff077042118add4c9059d 501 Pfam PF07690 Major Facilitator Superfamily 1 394 5.8E-56 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 Pfam PF03952 Enolase, N-terminal domain 4 133 9.3E-55 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 Hamap MF_00318 Enolase [eno]. 2 410 43.911 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 424 1.8E-196 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 Gene3D G3DSA:3.20.20.120 127 435 1.8E-128 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 423 3.8E-127 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 PRINTS PR00148 Enolase signature 362 379 1.1E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 PRINTS PR00148 Enolase signature 333 347 1.1E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 PRINTS PR00148 Enolase signature 37 51 1.1E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 PRINTS PR00148 Enolase signature 106 122 1.1E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 PRINTS PR00148 Enolase signature 310 321 1.1E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 PRINTS PR00148 Enolase signature 160 173 1.1E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 ProSitePatterns PS00164 Enolase signature. 333 346 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 PIRSF PIRSF001400 1 424 9.9E-184 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 SUPERFAMILY SSF51604 138 423 5.94E-122 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 SMART SM01192 138 424 8.3E-206 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 SUPERFAMILY SSF54826 4 135 5.72E-51 T 14-10-2018 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 SMART SM01193 4 133 2.0E-84 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tlie_0609 72f36516ef671d246f72793f8f1df66e 440 Gene3D G3DSA:3.30.390.10 1 126 1.9E-52 T 14-10-2018 IPR029017 Enolase-like, N-terminal Tlie_0178 d8234cbeb95af45e6a610117eba1a642 349 Gene3D G3DSA:2.40.50.100 69 256 1.0E-23 T 14-10-2018 Tlie_0178 d8234cbeb95af45e6a610117eba1a642 349 Pfam PF13437 HlyD family secretion protein 223 296 1.9E-10 T 14-10-2018 Tlie_0178 d8234cbeb95af45e6a610117eba1a642 349 Gene3D G3DSA:1.10.287.470 103 222 1.0E-23 T 14-10-2018 Tlie_0178 d8234cbeb95af45e6a610117eba1a642 349 SUPERFAMILY SSF56954 129 198 1.44E-8 T 14-10-2018 Tlie_0178 d8234cbeb95af45e6a610117eba1a642 349 Gene3D G3DSA:2.40.30.170 68 337 1.0E-23 T 14-10-2018 Tlie_0178 d8234cbeb95af45e6a610117eba1a642 349 SUPERFAMILY SSF111369 162 266 1.27E-5 T 14-10-2018 Tlie_0092 9e1794a88a85aa084fffd2ee62e296bd 214 Gene3D G3DSA:2.30.330.10 128 214 5.0E-33 T 14-10-2018 IPR036429 SpoA-like superfamily Tlie_0092 9e1794a88a85aa084fffd2ee62e296bd 214 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 138 208 1.9E-28 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) Tlie_0092 9e1794a88a85aa084fffd2ee62e296bd 214 PRINTS PR00956 Flagellar motor switch protein FliN signature 138 154 4.8E-25 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Tlie_0092 9e1794a88a85aa084fffd2ee62e296bd 214 PRINTS PR00956 Flagellar motor switch protein FliN signature 184 199 4.8E-25 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Tlie_0092 9e1794a88a85aa084fffd2ee62e296bd 214 PRINTS PR00956 Flagellar motor switch protein FliN signature 171 184 4.8E-25 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Tlie_0092 9e1794a88a85aa084fffd2ee62e296bd 214 PRINTS PR00956 Flagellar motor switch protein FliN signature 155 171 4.8E-25 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Tlie_0092 9e1794a88a85aa084fffd2ee62e296bd 214 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 136 210 5.3E-31 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 Tlie_0092 9e1794a88a85aa084fffd2ee62e296bd 214 SUPERFAMILY SSF101801 135 211 4.84E-25 T 14-10-2018 IPR036429 SpoA-like superfamily Tlie_1277 c773fb436bd3833c966420f3a5534505 248 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 177 247 9.5E-18 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 Tlie_1277 c773fb436bd3833c966420f3a5534505 248 PRINTS PR01374 Gram-negative bacterial tonB protein signature 103 113 7.4E-5 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Tlie_1277 c773fb436bd3833c966420f3a5534505 248 PRINTS PR01374 Gram-negative bacterial tonB protein signature 171 192 7.4E-5 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Tlie_1277 c773fb436bd3833c966420f3a5534505 248 PRINTS PR01374 Gram-negative bacterial tonB protein signature 192 210 7.4E-5 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Tlie_1277 c773fb436bd3833c966420f3a5534505 248 SUPERFAMILY SSF74653 170 245 4.05E-20 T 14-10-2018 Tlie_1277 c773fb436bd3833c966420f3a5534505 248 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 177 247 9.4E-18 T 14-10-2018 IPR006260 TonB/TolA, C-terminal Tlie_1098 c71c9cdc3be9aebf2ce75e1453663fa5 227 ProSitePatterns PS00517 Ribonuclease III family signature. 43 51 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Tlie_1098 c71c9cdc3be9aebf2ce75e1453663fa5 227 Gene3D G3DSA:1.10.1520.10 2 146 4.3E-45 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Tlie_1098 c71c9cdc3be9aebf2ce75e1453663fa5 227 Pfam PF00035 Double-stranded RNA binding motif 144 222 1.8E-11 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain Tlie_1098 c71c9cdc3be9aebf2ce75e1453663fa5 227 SMART SM00358 137 224 3.9E-11 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain Tlie_1098 c71c9cdc3be9aebf2ce75e1453663fa5 227 Pfam PF14622 Ribonuclease-III-like 20 144 1.1E-34 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Tlie_1098 c71c9cdc3be9aebf2ce75e1453663fa5 227 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 13 222 8.2E-65 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Tlie_1098 c71c9cdc3be9aebf2ce75e1453663fa5 227 SUPERFAMILY SSF69065 4 152 2.09E-46 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Tlie_1098 c71c9cdc3be9aebf2ce75e1453663fa5 227 Gene3D G3DSA:3.30.160.20 147 226 3.4E-15 T 14-10-2018 Tlie_1098 c71c9cdc3be9aebf2ce75e1453663fa5 227 SUPERFAMILY SSF54768 172 224 1.24E-15 T 14-10-2018 Tlie_1098 c71c9cdc3be9aebf2ce75e1453663fa5 227 SMART SM00535 21 154 1.6E-45 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Tlie_1098 c71c9cdc3be9aebf2ce75e1453663fa5 227 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 25.937 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Tlie_1875 e34c1a1b6befd2e1faf37527eccee8a3 296 Pfam PF02195 ParB-like nuclease domain 37 123 2.5E-25 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Tlie_1875 e34c1a1b6befd2e1faf37527eccee8a3 296 SMART SM00470 35 124 5.4E-32 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Tlie_1875 e34c1a1b6befd2e1faf37527eccee8a3 296 Gene3D G3DSA:3.90.1530.30 48 109 1.7E-25 T 14-10-2018 Tlie_1875 e34c1a1b6befd2e1faf37527eccee8a3 296 SUPERFAMILY SSF109709 116 224 3.66E-32 T 14-10-2018 Tlie_1875 e34c1a1b6befd2e1faf37527eccee8a3 296 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 33 206 3.9E-53 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Tlie_1875 e34c1a1b6befd2e1faf37527eccee8a3 296 Gene3D G3DSA:1.10.10.2830 111 225 4.3E-35 T 14-10-2018 Tlie_1875 e34c1a1b6befd2e1faf37527eccee8a3 296 SUPERFAMILY SSF110849 35 126 3.4E-28 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Tlie_0990 600f78253fcf88d10d0e09f0824465d9 277 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 116 252 1.6E-29 T 14-10-2018 IPR001453 MoaB/Mog domain Tlie_0990 600f78253fcf88d10d0e09f0824465d9 277 SMART SM00852 118 261 7.9E-30 T 14-10-2018 IPR001453 MoaB/Mog domain Tlie_0990 600f78253fcf88d10d0e09f0824465d9 277 Pfam PF00994 Probable molybdopterin binding domain 118 260 8.2E-29 T 14-10-2018 IPR001453 MoaB/Mog domain Tlie_0990 600f78253fcf88d10d0e09f0824465d9 277 Gene3D G3DSA:3.40.980.10 106 277 8.5E-48 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tlie_0990 600f78253fcf88d10d0e09f0824465d9 277 SUPERFAMILY SSF53218 114 265 3.8E-41 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tlie_0990 600f78253fcf88d10d0e09f0824465d9 277 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 177 190 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Tlie_0525 31d812c9261c756c44ab086e0dae7652 280 PIRSF PIRSF006230 1 272 1.5E-56 T 14-10-2018 IPR016478 GTPase, MTG1 Tlie_0525 31d812c9261c756c44ab086e0dae7652 280 Pfam PF01926 50S ribosome-binding GTPase 112 188 7.5E-12 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_0525 31d812c9261c756c44ab086e0dae7652 280 SUPERFAMILY SSF52540 10 168 1.87E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0525 31d812c9261c756c44ab086e0dae7652 280 Gene3D G3DSA:1.10.1580.10 172 270 2.9E-16 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily Tlie_0525 31d812c9261c756c44ab086e0dae7652 280 Gene3D G3DSA:3.40.50.300 4 164 2.3E-34 T 14-10-2018 Tlie_0972 6b2bd41f7daa1e5649a69537706bb1e2 551 SUPERFAMILY SSF56601 210 548 2.33E-94 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tlie_0972 6b2bd41f7daa1e5649a69537706bb1e2 551 Gene3D G3DSA:3.30.450.330 211 547 4.4E-108 T 14-10-2018 Tlie_0972 6b2bd41f7daa1e5649a69537706bb1e2 551 Pfam PF00905 Penicillin binding protein transpeptidase domain 236 543 1.1E-72 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Tlie_0972 6b2bd41f7daa1e5649a69537706bb1e2 551 Gene3D G3DSA:3.90.1310.30 43 200 8.2E-28 T 14-10-2018 Tlie_0972 6b2bd41f7daa1e5649a69537706bb1e2 551 SUPERFAMILY SSF56519 47 193 2.22E-29 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Tlie_0972 6b2bd41f7daa1e5649a69537706bb1e2 551 Gene3D G3DSA:3.40.710.10 272 464 4.4E-108 T 14-10-2018 Tlie_0972 6b2bd41f7daa1e5649a69537706bb1e2 551 Pfam PF03717 Penicillin-binding Protein dimerisation domain 49 151 1.5E-7 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Tlie_1836 24f65aba203e7ca0f6b7b245bb904768 398 Pfam PF02515 CoA-transferase family III 7 374 1.6E-142 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 Tlie_1836 24f65aba203e7ca0f6b7b245bb904768 398 SUPERFAMILY SSF89796 5 398 8.89E-146 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Tlie_1836 24f65aba203e7ca0f6b7b245bb904768 398 Gene3D G3DSA:3.40.50.10540 7 392 6.2E-150 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Tlie_1836 24f65aba203e7ca0f6b7b245bb904768 398 Gene3D G3DSA:3.30.1540.10 232 324 6.2E-150 T 14-10-2018 Tlie_1243 fe85c6a9fe09d0a184a68dd79a86af73 281 SUPERFAMILY SSF51621 6 266 3.3E-105 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tlie_1243 fe85c6a9fe09d0a184a68dd79a86af73 281 Pfam PF02548 Ketopantoate hydroxymethyltransferase 6 261 4.9E-112 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Tlie_1243 fe85c6a9fe09d0a184a68dd79a86af73 281 PIRSF PIRSF000388 2 269 1.2E-112 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Tlie_1243 fe85c6a9fe09d0a184a68dd79a86af73 281 Gene3D G3DSA:3.20.20.60 3 277 5.7E-116 T 14-10-2018 Tlie_1243 fe85c6a9fe09d0a184a68dd79a86af73 281 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 5 266 42.15 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Tlie_1243 fe85c6a9fe09d0a184a68dd79a86af73 281 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 9 266 1.1E-102 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Tlie_1184 93ecf1d641b7543dd005035c4bacf434 285 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.5E-41 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1184 93ecf1d641b7543dd005035c4bacf434 285 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.5E-41 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1184 93ecf1d641b7543dd005035c4bacf434 285 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.5E-41 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1184 93ecf1d641b7543dd005035c4bacf434 285 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.5E-41 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1184 93ecf1d641b7543dd005035c4bacf434 285 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.5E-41 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1184 93ecf1d641b7543dd005035c4bacf434 285 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.5E-41 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1184 93ecf1d641b7543dd005035c4bacf434 285 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Tlie_1184 93ecf1d641b7543dd005035c4bacf434 285 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 4.6E-107 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1184 93ecf1d641b7543dd005035c4bacf434 285 Pfam PF00318 Ribosomal protein S2 9 224 7.9E-97 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1184 93ecf1d641b7543dd005035c4bacf434 285 Gene3D G3DSA:3.40.50.10490 8 219 2.4E-91 T 14-10-2018 Tlie_1184 93ecf1d641b7543dd005035c4bacf434 285 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Tlie_1184 93ecf1d641b7543dd005035c4bacf434 285 SUPERFAMILY SSF52313 6 232 3.4E-95 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Tlie_1184 93ecf1d641b7543dd005035c4bacf434 285 Gene3D G3DSA:1.10.287.610 103 150 2.4E-91 T 14-10-2018 Tlie_1184 93ecf1d641b7543dd005035c4bacf434 285 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 43.493 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0038 01f9b7234f44725c5dabfae80d01836b 255 SMART SM00382 33 226 2.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0038 01f9b7234f44725c5dabfae80d01836b 255 SUPERFAMILY SSF52540 9 242 6.15E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0038 01f9b7234f44725c5dabfae80d01836b 255 Gene3D G3DSA:3.40.50.300 9 253 3.9E-64 T 14-10-2018 Tlie_0038 01f9b7234f44725c5dabfae80d01836b 255 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 10 255 2.4E-128 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Tlie_0038 01f9b7234f44725c5dabfae80d01836b 255 Pfam PF00005 ABC transporter 24 180 3.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0038 01f9b7234f44725c5dabfae80d01836b 255 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0194 249e6abdd97946bd0a1704f7bf032350 92 SUPERFAMILY SSF143414 4 89 7.98E-34 T 14-10-2018 IPR037233 CcmK-like superfamily Tlie_0194 249e6abdd97946bd0a1704f7bf032350 92 SMART SM00877 4 80 3.1E-39 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0194 249e6abdd97946bd0a1704f7bf032350 92 Pfam PF00936 BMC domain 5 80 2.8E-31 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0194 249e6abdd97946bd0a1704f7bf032350 92 Gene3D G3DSA:3.30.70.1710 1 92 5.4E-44 T 14-10-2018 Tlie_0194 249e6abdd97946bd0a1704f7bf032350 92 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 22 41 - T 14-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Tlie_0194 249e6abdd97946bd0a1704f7bf032350 92 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 5 48 1.0E-14 T 14-10-2018 Tlie_0171 7ca8d5b3cb5d264d7e79946114bcfe9e 274 Pfam PF01925 Sulfite exporter TauE/SafE 3 267 1.3E-49 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Tlie_1238 2f6ead436fe05b0ca1093e4b0d54f7cb 197 SUPERFAMILY SSF53697 11 194 8.01E-49 T 14-10-2018 Tlie_1238 2f6ead436fe05b0ca1093e4b0d54f7cb 197 Gene3D G3DSA:3.40.50.10490 6 196 2.5E-68 T 14-10-2018 Tlie_1238 2f6ead436fe05b0ca1093e4b0d54f7cb 197 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 8 194 34.318 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 Tlie_1238 2f6ead436fe05b0ca1093e4b0d54f7cb 197 Pfam PF13580 SIS domain 27 151 1.4E-27 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Tlie_1119 1d633d8b40003e862b13388ae3e06cbc 91 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.1E-12 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tlie_1119 1d633d8b40003e862b13388ae3e06cbc 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.1E-12 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tlie_1119 1d633d8b40003e862b13388ae3e06cbc 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.5E-32 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tlie_1119 1d633d8b40003e862b13388ae3e06cbc 91 Gene3D G3DSA:4.10.520.10 1 91 6.1E-35 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Tlie_1119 1d633d8b40003e862b13388ae3e06cbc 91 SUPERFAMILY SSF47729 1 91 4.42E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Tlie_1119 1d633d8b40003e862b13388ae3e06cbc 91 SMART SM00411 1 91 2.5E-42 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tlie_1885 59a9a1d71b4dc729d8b3e3e105765f6a 382 SUPERFAMILY SSF53756 99 370 2.54E-27 T 14-10-2018 Tlie_1885 59a9a1d71b4dc729d8b3e3e105765f6a 382 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 17 183 2.8E-20 T 14-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 Tlie_1885 59a9a1d71b4dc729d8b3e3e105765f6a 382 Gene3D G3DSA:3.40.50.2000 192 355 1.1E-28 T 14-10-2018 Tlie_1885 59a9a1d71b4dc729d8b3e3e105765f6a 382 Pfam PF00534 Glycosyl transferases group 1 231 315 1.3E-7 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tlie_0946 54ea75d34cdb0eee49f7e25cec55b0d3 124 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 121 1.0E-4 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Tlie_0946 54ea75d34cdb0eee49f7e25cec55b0d3 124 Gene3D G3DSA:3.90.470.20 1 122 1.0E-29 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Tlie_0946 54ea75d34cdb0eee49f7e25cec55b0d3 124 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 118 2.8E-13 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Tlie_0946 54ea75d34cdb0eee49f7e25cec55b0d3 124 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 4 121 1.9E-19 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Tlie_0946 54ea75d34cdb0eee49f7e25cec55b0d3 124 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 122 18.978 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Tlie_0946 54ea75d34cdb0eee49f7e25cec55b0d3 124 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 3 122 1.4E-21 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Tlie_0946 54ea75d34cdb0eee49f7e25cec55b0d3 124 SUPERFAMILY SSF56214 4 121 8.37E-22 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Tlie_0109 d02a28cd1e2fb6c62cc26b4ae77d8e08 147 Pfam PF02561 Flagellar protein FliS 10 122 5.6E-31 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Tlie_0109 d02a28cd1e2fb6c62cc26b4ae77d8e08 147 SUPERFAMILY SSF101116 7 126 7.59E-28 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Tlie_0109 d02a28cd1e2fb6c62cc26b4ae77d8e08 147 PIRSF PIRSF039090 4 133 8.8E-27 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Tlie_0109 d02a28cd1e2fb6c62cc26b4ae77d8e08 147 TIGRFAM TIGR00208 fliS: flagellar protein FliS 12 123 5.3E-20 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Tlie_0109 d02a28cd1e2fb6c62cc26b4ae77d8e08 147 Gene3D G3DSA:1.20.120.340 4 126 1.5E-30 T 14-10-2018 Tlie_1663 c2b13b08fb9f2cc1c2771258cd5575e5 480 Gene3D G3DSA:3.30.870.10 110 298 3.4E-40 T 14-10-2018 Tlie_1663 c2b13b08fb9f2cc1c2771258cd5575e5 480 Pfam PF13091 PLD-like domain 134 278 2.0E-14 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Tlie_1663 c2b13b08fb9f2cc1c2771258cd5575e5 480 Pfam PF13091 PLD-like domain 322 434 1.8E-21 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Tlie_1663 c2b13b08fb9f2cc1c2771258cd5575e5 480 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 11 480 9.3E-113 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 Tlie_1663 c2b13b08fb9f2cc1c2771258cd5575e5 480 Gene3D G3DSA:3.30.870.10 299 479 4.3E-28 T 14-10-2018 Tlie_1663 c2b13b08fb9f2cc1c2771258cd5575e5 480 SUPERFAMILY SSF56024 270 465 5.16E-42 T 14-10-2018 Tlie_1663 c2b13b08fb9f2cc1c2771258cd5575e5 480 SMART SM00155 393 420 0.022 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Tlie_1663 c2b13b08fb9f2cc1c2771258cd5575e5 480 SMART SM00155 218 245 0.039 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Tlie_1663 c2b13b08fb9f2cc1c2771258cd5575e5 480 SUPERFAMILY SSF56024 101 309 2.07E-46 T 14-10-2018 Tlie_0943 6392acd15c0a7519ba6447bf527c9d3a 666 SMART SM00487 9 424 6.1E-26 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tlie_0943 6392acd15c0a7519ba6447bf527c9d3a 666 SUPERFAMILY SSF52540 36 569 5.74E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0943 6392acd15c0a7519ba6447bf527c9d3a 666 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 650 40.96 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Tlie_0943 6392acd15c0a7519ba6447bf527c9d3a 666 Pfam PF04851 Type III restriction enzyme, res subunit 17 139 4.7E-12 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Tlie_0943 6392acd15c0a7519ba6447bf527c9d3a 666 SUPERFAMILY SSF52540 4 413 2.38E-125 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0943 6392acd15c0a7519ba6447bf527c9d3a 666 Gene3D G3DSA:3.30.2060.10 161 244 1.1E-16 T 14-10-2018 Tlie_0943 6392acd15c0a7519ba6447bf527c9d3a 666 Pfam PF12344 Ultra-violet resistance protein B 550 591 1.4E-18 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Tlie_0943 6392acd15c0a7519ba6447bf527c9d3a 666 SMART SM00490 458 544 3.0E-20 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_0943 6392acd15c0a7519ba6447bf527c9d3a 666 Gene3D G3DSA:3.40.50.300 1 160 1.5E-71 T 14-10-2018 Tlie_0943 6392acd15c0a7519ba6447bf527c9d3a 666 Pfam PF02151 UvrB/uvrC motif 616 645 1.8E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 Tlie_0943 6392acd15c0a7519ba6447bf527c9d3a 666 Gene3D G3DSA:3.40.50.300 413 594 4.2E-49 T 14-10-2018 Tlie_0943 6392acd15c0a7519ba6447bf527c9d3a 666 SUPERFAMILY SSF46600 615 645 3.4E-6 T 14-10-2018 IPR036876 UVR domain superfamily Tlie_0943 6392acd15c0a7519ba6447bf527c9d3a 666 Pfam PF00271 Helicase conserved C-terminal domain 442 543 7.5E-17 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_0943 6392acd15c0a7519ba6447bf527c9d3a 666 Gene3D G3DSA:3.40.50.300 278 412 1.1E-53 T 14-10-2018 Tlie_0943 6392acd15c0a7519ba6447bf527c9d3a 666 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 646 3.2E-294 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Tlie_1438 eee7a5e8f0a8ad4f28af9e14f5758f1f 311 SMART SM00729 3 214 2.5E-29 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tlie_1438 eee7a5e8f0a8ad4f28af9e14f5758f1f 311 Gene3D G3DSA:3.80.30.20 2 243 7.3E-22 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tlie_1438 eee7a5e8f0a8ad4f28af9e14f5758f1f 311 Pfam PF04055 Radical SAM superfamily 8 156 6.5E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_1438 eee7a5e8f0a8ad4f28af9e14f5758f1f 311 Pfam PF16199 Radical_SAM C-terminal domain 177 257 7.1E-14 T 14-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 Tlie_1438 eee7a5e8f0a8ad4f28af9e14f5758f1f 311 SUPERFAMILY SSF102114 7 237 1.28E-43 T 14-10-2018 Tlie_1311 eb80996265a2cd789bcd64a93b1b6144 185 Gene3D G3DSA:3.40.50.360 1 182 1.9E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tlie_1311 eb80996265a2cd789bcd64a93b1b6144 185 SUPERFAMILY SSF52218 1 184 7.92E-36 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tlie_1311 eb80996265a2cd789bcd64a93b1b6144 185 Pfam PF03358 NADPH-dependent FMN reductase 4 129 1.4E-23 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Tlie_0177 1011642c8cffc5da265109e156b49e99 467 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 431 2.4E-5 T 14-10-2018 IPR000160 GGDEF domain Tlie_0177 1011642c8cffc5da265109e156b49e99 467 Gene3D G3DSA:3.30.70.270 323 460 5.0E-6 T 14-10-2018 Tlie_0231 f31e55a6bfdaecf88eadbb076ab0508f 339 PIRSF PIRSF016838 3 52 1.3 T 14-10-2018 IPR028349 Protein PafC Tlie_0231 f31e55a6bfdaecf88eadbb076ab0508f 339 PIRSF PIRSF016838 76 332 3.0E-12 T 14-10-2018 IPR028349 Protein PafC Tlie_0231 f31e55a6bfdaecf88eadbb076ab0508f 339 Pfam PF13280 WYL domain 148 324 1.1E-30 T 14-10-2018 IPR026881 WYL domain Tlie_0051 18c091b9ece15642e9da032602797f51 73 SUPERFAMILY SSF64307 4 72 4.71E-15 T 14-10-2018 IPR036868 TusA-like domain superfamily Tlie_0051 18c091b9ece15642e9da032602797f51 73 Pfam PF01206 Sulfurtransferase TusA 5 72 5.7E-17 T 14-10-2018 IPR001455 TusA-like domain Tlie_0051 18c091b9ece15642e9da032602797f51 73 Gene3D G3DSA:3.30.110.40 5 73 1.8E-22 T 14-10-2018 IPR036868 TusA-like domain superfamily Tlie_0917 a3981618171b6ed349758c7fc5850011 204 SMART SM00493 81 166 0.0025 T 14-10-2018 IPR006171 TOPRIM domain Tlie_0917 a3981618171b6ed349758c7fc5850011 204 Gene3D G3DSA:3.40.1360.10 78 199 2.7E-37 T 14-10-2018 Tlie_0917 a3981618171b6ed349758c7fc5850011 204 SUPERFAMILY SSF111304 4 200 1.31E-61 T 14-10-2018 IPR023627 Recombination protein RecR Tlie_0917 a3981618171b6ed349758c7fc5850011 204 ProSitePatterns PS01300 RecR protein signature. 56 79 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 Tlie_0917 a3981618171b6ed349758c7fc5850011 204 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 73.55 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Tlie_0917 a3981618171b6ed349758c7fc5850011 204 TIGRFAM TIGR00615 recR: recombination protein RecR 4 196 3.9E-57 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Tlie_0917 a3981618171b6ed349758c7fc5850011 204 Gene3D G3DSA:1.10.8.420 3 52 1.3E-13 T 14-10-2018 Tlie_0917 a3981618171b6ed349758c7fc5850011 204 Pfam PF13662 Toprim domain 82 172 2.1E-14 T 14-10-2018 IPR006171 TOPRIM domain Tlie_0917 a3981618171b6ed349758c7fc5850011 204 Pfam PF02132 RecR protein 41 79 5.9E-13 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger Tlie_1671 ce5b02f5423b643ccc1cf3f67624d560 317 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 305 6.5E-55 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tlie_1671 ce5b02f5423b643ccc1cf3f67624d560 317 SUPERFAMILY SSF53686 2 315 2.1E-80 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tlie_1671 ce5b02f5423b643ccc1cf3f67624d560 317 Gene3D G3DSA:3.40.50.1100 45 153 1.1E-96 T 14-10-2018 Tlie_1671 ce5b02f5423b643ccc1cf3f67624d560 317 Gene3D G3DSA:3.40.50.1100 5 312 1.1E-96 T 14-10-2018 Tlie_0390 225d188b5c70371aed0431ddc5e33da5 294 SUPERFAMILY SSF52540 32 263 1.4E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0390 225d188b5c70371aed0431ddc5e33da5 294 PIRSF PIRSF005647 29 282 2.2E-51 T 14-10-2018 IPR014433 Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type Tlie_0390 225d188b5c70371aed0431ddc5e33da5 294 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 31 261 4.8E-13 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tlie_0390 225d188b5c70371aed0431ddc5e33da5 294 Gene3D G3DSA:3.40.50.300 30 279 2.6E-35 T 14-10-2018 Tlie_0163 9a71066dfb43d55e5b10dd1811e6431b 285 SUPERFAMILY SSF54211 1 157 2.05E-21 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_0163 9a71066dfb43d55e5b10dd1811e6431b 285 PIRSF PIRSF033887 1 282 9.6E-79 T 14-10-2018 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443 Tlie_0163 9a71066dfb43d55e5b10dd1811e6431b 285 Pfam PF00288 GHMP kinases N terminal domain 76 123 4.0E-9 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Tlie_0163 9a71066dfb43d55e5b10dd1811e6431b 285 Gene3D G3DSA:3.30.230.10 26 147 1.4E-15 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tlie_1497 a060ef205a46e8d79855e8855cc0a726 363 Pfam PF01992 ATP synthase (C/AC39) subunit 17 342 4.6E-47 T 14-10-2018 IPR002843 ATPase, V0 complex, c/d subunit Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1497 a060ef205a46e8d79855e8855cc0a726 363 Gene3D G3DSA:1.20.1690.10 195 310 2.2E-19 T 14-10-2018 IPR035067 V-type ATPase subunit c Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1497 a060ef205a46e8d79855e8855cc0a726 363 SUPERFAMILY SSF103486 21 345 3.14E-23 T 14-10-2018 IPR036079 V-type ATP synthase subunit C-like Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1497 a060ef205a46e8d79855e8855cc0a726 363 Gene3D G3DSA:1.10.132.50 20 340 2.2E-19 T 14-10-2018 Tlie_1497 a060ef205a46e8d79855e8855cc0a726 363 Gene3D G3DSA:1.20.1690.10 89 194 2.2E-19 T 14-10-2018 IPR035067 V-type ATPase subunit c Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1085 44ba4b4887045d45413e756a4fe3367f 255 SUPERFAMILY SSF52540 6 234 1.04E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1085 44ba4b4887045d45413e756a4fe3367f 255 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_1085 44ba4b4887045d45413e756a4fe3367f 255 Pfam PF00005 ABC transporter 21 171 2.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1085 44ba4b4887045d45413e756a4fe3367f 255 SMART SM00382 30 221 4.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1085 44ba4b4887045d45413e756a4fe3367f 255 Gene3D G3DSA:3.40.50.300 5 244 1.0E-65 T 14-10-2018 Tlie_0058 e707d42cf30787638dd7f0a9eb72f88f 158 SUPERFAMILY SSF50475 1 154 1.5E-51 T 14-10-2018 Tlie_0058 e707d42cf30787638dd7f0a9eb72f88f 158 Gene3D G3DSA:2.30.110.10 3 156 1.4E-52 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Tlie_0058 e707d42cf30787638dd7f0a9eb72f88f 158 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 14 153 2.4E-26 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related Tlie_0677 1b857aa7291192f2a512a10f8d5f488f 277 Pfam PF00005 ABC transporter 26 173 1.5E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0677 1b857aa7291192f2a512a10f8d5f488f 277 SMART SM00382 35 219 6.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0677 1b857aa7291192f2a512a10f8d5f488f 277 SUPERFAMILY SSF52540 7 232 1.2E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0677 1b857aa7291192f2a512a10f8d5f488f 277 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 9 276 2.9E-97 T 14-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 Tlie_0677 1b857aa7291192f2a512a10f8d5f488f 277 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0677 1b857aa7291192f2a512a10f8d5f488f 277 Gene3D G3DSA:3.40.50.300 5 259 5.7E-65 T 14-10-2018 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 SUPERFAMILY SSF88946 106 215 1.31E-54 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 SUPERFAMILY SSF88659 218 291 2.22E-22 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 Gene3D G3DSA:1.10.601.10 139 217 1.6E-51 T 14-10-2018 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 Gene3D G3DSA:1.10.601.10 105 138 4.5E-12 T 14-10-2018 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 SUPERFAMILY SSF88659 275 377 4.49E-33 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 Pfam PF04545 Sigma-70, region 4 314 366 1.9E-21 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 140 366 4.3E-42 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 17 378 33.974 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 Gene3D G3DSA:1.10.220.120 22 81 1.8E-12 T 14-10-2018 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 141 377 2.6E-124 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 169 182 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 Gene3D G3DSA:1.10.10.10 218 293 1.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 Gene3D G3DSA:1.10.10.10 294 378 1.5E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 Pfam PF00140 Sigma-70 factor, region 1.2 107 139 4.9E-20 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 PRINTS PR00046 Major sigma-70 factor signature 338 353 1.0E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 PRINTS PR00046 Major sigma-70 factor signature 317 329 1.0E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 PRINTS PR00046 Major sigma-70 factor signature 353 364 1.0E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 PRINTS PR00046 Major sigma-70 factor signature 169 182 1.0E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 PRINTS PR00046 Major sigma-70 factor signature 193 201 1.0E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 338 364 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 Pfam PF04539 Sigma-70 region 3 224 300 1.6E-30 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 Pfam PF03979 Sigma-70 factor, region 1.1 24 82 6.7E-14 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 Tlie_0607 1492551ed7c9dbf7ef07981ba80ba102 378 Pfam PF04542 Sigma-70 region 2 145 214 5.6E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tlie_1049 ce4b0fbfb06151b94d13645a5a29b5ac 380 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 378 36.342 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tlie_1049 ce4b0fbfb06151b94d13645a5a29b5ac 380 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 142 226 3.1E-36 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tlie_1049 ce4b0fbfb06151b94d13645a5a29b5ac 380 PIRSF PIRSF006205 1 380 1.3E-111 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tlie_1049 ce4b0fbfb06151b94d13645a5a29b5ac 380 SUPERFAMILY SSF69055 289 378 5.1E-20 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tlie_1049 ce4b0fbfb06151b94d13645a5a29b5ac 380 Gene3D G3DSA:1.10.1740.10 299 380 7.2E-18 T 14-10-2018 Tlie_1049 ce4b0fbfb06151b94d13645a5a29b5ac 380 SUPERFAMILY SSF55347 123 257 3.14E-49 T 14-10-2018 Tlie_1049 ce4b0fbfb06151b94d13645a5a29b5ac 380 SUPERFAMILY SSF51735 3 146 8.0E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1049 ce4b0fbfb06151b94d13645a5a29b5ac 380 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 378 2.2E-97 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tlie_1049 ce4b0fbfb06151b94d13645a5a29b5ac 380 Gene3D G3DSA:3.40.50.720 1 146 1.2E-31 T 14-10-2018 Tlie_1049 ce4b0fbfb06151b94d13645a5a29b5ac 380 Pfam PF13288 DXP reductoisomerase C-terminal domain 260 366 1.9E-24 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tlie_1049 ce4b0fbfb06151b94d13645a5a29b5ac 380 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 129 1.6E-22 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tlie_0800 4f0947c51d814cfe7dba36ea90b17b71 310 Gene3D G3DSA:3.60.70.12 1 293 9.4E-104 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Tlie_0800 4f0947c51d814cfe7dba36ea90b17b71 310 Pfam PF03576 Peptidase family S58 4 304 4.4E-50 T 14-10-2018 IPR005321 Peptidase S58, DmpA Tlie_0800 4f0947c51d814cfe7dba36ea90b17b71 310 SUPERFAMILY SSF56266 4 304 2.09E-58 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Tlie_0144 3fb3c42c7fe9adcc41e6f4dd9105dc7b 560 SUPERFAMILY SSF143975 9 376 3.53E-109 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tlie_0144 3fb3c42c7fe9adcc41e6f4dd9105dc7b 560 Gene3D G3DSA:3.50.30.80 377 527 1.7E-52 T 14-10-2018 Tlie_0144 3fb3c42c7fe9adcc41e6f4dd9105dc7b 560 Pfam PF00920 Dehydratase family 34 554 9.7E-188 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tlie_0144 3fb3c42c7fe9adcc41e6f4dd9105dc7b 560 SUPERFAMILY SSF52016 377 557 1.57E-56 T 14-10-2018 Tlie_1180 8d7833bb015a6c8418775b0f7828b46b 314 Gene3D G3DSA:3.40.1160.10 1 313 3.6E-130 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tlie_1180 8d7833bb015a6c8418775b0f7828b46b 314 PRINTS PR01469 Bacterial carbamate kinase signature 111 130 2.4E-65 T 14-10-2018 Tlie_1180 8d7833bb015a6c8418775b0f7828b46b 314 PRINTS PR01469 Bacterial carbamate kinase signature 160 179 2.4E-65 T 14-10-2018 Tlie_1180 8d7833bb015a6c8418775b0f7828b46b 314 PRINTS PR01469 Bacterial carbamate kinase signature 183 201 2.4E-65 T 14-10-2018 Tlie_1180 8d7833bb015a6c8418775b0f7828b46b 314 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 2.4E-65 T 14-10-2018 Tlie_1180 8d7833bb015a6c8418775b0f7828b46b 314 PRINTS PR01469 Bacterial carbamate kinase signature 75 93 2.4E-65 T 14-10-2018 Tlie_1180 8d7833bb015a6c8418775b0f7828b46b 314 PRINTS PR01469 Bacterial carbamate kinase signature 269 284 2.4E-65 T 14-10-2018 Tlie_1180 8d7833bb015a6c8418775b0f7828b46b 314 PRINTS PR01469 Bacterial carbamate kinase signature 214 229 2.4E-65 T 14-10-2018 Tlie_1180 8d7833bb015a6c8418775b0f7828b46b 314 Pfam PF00696 Amino acid kinase family 4 296 2.3E-30 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Tlie_1180 8d7833bb015a6c8418775b0f7828b46b 314 SUPERFAMILY SSF53633 3 312 3.94E-81 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tlie_1180 8d7833bb015a6c8418775b0f7828b46b 314 PIRSF PIRSF000723 1 314 4.3E-137 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 Tlie_1180 8d7833bb015a6c8418775b0f7828b46b 314 TIGRFAM TIGR00746 arcC: carbamate kinase 4 313 1.3E-132 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 Tlie_1494 bf63645de279568dbd7222427139d430 99 SUPERFAMILY SSF159468 2 98 2.49E-20 T 14-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1494 bf63645de279568dbd7222427139d430 99 Pfam PF01990 ATP synthase (F/14-kDa) subunit 2 90 2.0E-19 T 14-10-2018 IPR008218 ATPase, V1 complex, subunit F GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1494 bf63645de279568dbd7222427139d430 99 Gene3D G3DSA:3.40.50.10580 1 99 8.6E-23 T 14-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0277 ffb5dc199ffe0e2b3b941e8e28404bd9 267 PIRSF PIRSF029755 1 267 1.1E-121 T 14-10-2018 IPR016938 Uncharacterised protein family UPF0317 Tlie_0277 ffb5dc199ffe0e2b3b941e8e28404bd9 267 Pfam PF07286 Protein of unknown function (DUF1445) 116 257 8.2E-66 T 14-10-2018 IPR009906 D-glutamate cyclase Tlie_0277 ffb5dc199ffe0e2b3b941e8e28404bd9 267 Gene3D G3DSA:3.30.2040.10 126 238 3.5E-96 T 14-10-2018 Tlie_0277 ffb5dc199ffe0e2b3b941e8e28404bd9 267 Hamap MF_01830 Putative hydro-lyase . 12 266 55.155 T 14-10-2018 IPR016938 Uncharacterised protein family UPF0317 Tlie_0277 ffb5dc199ffe0e2b3b941e8e28404bd9 267 SUPERFAMILY SSF160920 9 259 1.05E-114 T 14-10-2018 IPR038021 Putative hydro-lyase Tlie_0277 ffb5dc199ffe0e2b3b941e8e28404bd9 267 Gene3D G3DSA:3.40.1640.10 21 254 3.5E-96 T 14-10-2018 Tlie_1470 2377bd26004288e86e444130e28195da 350 Gene3D G3DSA:3.40.50.720 11 335 3.8E-95 T 14-10-2018 Tlie_1470 2377bd26004288e86e444130e28195da 350 SUPERFAMILY SSF55347 155 317 1.24E-24 T 14-10-2018 Tlie_1470 2377bd26004288e86e444130e28195da 350 Gene3D G3DSA:3.30.360.10 153 321 3.8E-95 T 14-10-2018 Tlie_1470 2377bd26004288e86e444130e28195da 350 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 145 1.7E-28 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Tlie_1470 2377bd26004288e86e444130e28195da 350 SMART SM00859 8 147 1.7E-45 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Tlie_1470 2377bd26004288e86e444130e28195da 350 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 8 349 4.9E-101 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tlie_1470 2377bd26004288e86e444130e28195da 350 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 7 343 34.68 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tlie_1470 2377bd26004288e86e444130e28195da 350 SUPERFAMILY SSF51735 5 178 7.62E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0631 1375735db38d0cb022a31e1ebbac77a3 1139 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 3 1135 3.8E-186 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Tlie_0631 1375735db38d0cb022a31e1ebbac77a3 1139 Pfam PF06470 SMC proteins Flexible Hinge Domain 506 617 9.9E-20 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 Tlie_0631 1375735db38d0cb022a31e1ebbac77a3 1139 SMART SM00968 501 618 1.1E-18 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 Tlie_0631 1375735db38d0cb022a31e1ebbac77a3 1139 SUPERFAMILY SSF75553 457 671 2.48E-37 T 14-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 Tlie_0631 1375735db38d0cb022a31e1ebbac77a3 1139 Gene3D G3DSA:3.30.70.1620 561 646 4.4E-43 T 14-10-2018 Tlie_0631 1375735db38d0cb022a31e1ebbac77a3 1139 Gene3D G3DSA:1.20.1060.20 482 655 4.4E-43 T 14-10-2018 Tlie_0631 1375735db38d0cb022a31e1ebbac77a3 1139 Gene3D G3DSA:3.40.50.300 917 1139 7.8E-42 T 14-10-2018 Tlie_0631 1375735db38d0cb022a31e1ebbac77a3 1139 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1137 16.838 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Tlie_0631 1375735db38d0cb022a31e1ebbac77a3 1139 PIRSF PIRSF005719 1 251 1.0E-59 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein Tlie_0631 1375735db38d0cb022a31e1ebbac77a3 1139 PIRSF PIRSF005719 261 1138 5.6E-125 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein Tlie_0631 1375735db38d0cb022a31e1ebbac77a3 1139 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1127 1.4E-51 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Tlie_0631 1375735db38d0cb022a31e1ebbac77a3 1139 SUPERFAMILY SSF52540 2 1127 3.56E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0631 1375735db38d0cb022a31e1ebbac77a3 1139 Gene3D G3DSA:3.40.50.300 1 246 3.6E-42 T 14-10-2018 Tlie_1050 190d7edae8c77127920b0c3b7ba081dc 272 Pfam PF01148 Cytidylyltransferase family 12 266 9.9E-56 T 14-10-2018 Tlie_1050 190d7edae8c77127920b0c3b7ba081dc 272 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 228 254 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 Tlie_1230 9e98feb483a5f19ac189b9a6b7d10387 275 Pfam PF12706 Beta-lactamase superfamily domain 49 234 4.2E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tlie_1230 9e98feb483a5f19ac189b9a6b7d10387 275 Gene3D G3DSA:3.60.15.10 10 267 1.8E-25 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_1230 9e98feb483a5f19ac189b9a6b7d10387 275 SUPERFAMILY SSF56281 16 269 5.77E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_1853 cc6186ab7264470893d2bc3d3063eb86 142 Gene3D G3DSA:2.40.10.220 12 142 5.9E-9 T 14-10-2018 Tlie_1853 cc6186ab7264470893d2bc3d3063eb86 142 SUPERFAMILY SSF141371 14 96 1.84E-7 T 14-10-2018 Tlie_1853 cc6186ab7264470893d2bc3d3063eb86 142 Pfam PF07238 PilZ domain 17 120 1.0E-9 T 14-10-2018 IPR009875 PilZ domain GO:0035438 Tlie_0396 b5a29c586312a348957f7a30fe857f33 166 Gene3D G3DSA:1.10.1760.20 3 166 1.7E-54 T 14-10-2018 Tlie_0396 b5a29c586312a348957f7a30fe857f33 166 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 7 162 7.1E-41 T 14-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 Tlie_0396 b5a29c586312a348957f7a30fe857f33 166 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 9 161 4.6E-50 T 14-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 Pfam PF17203 Single cache domain 3 38 154 4.1E-13 T 14-10-2018 IPR033463 Single cache domain 3 Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 Pfam PF00989 PAS fold 214 281 6.8E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 SUPERFAMILY SSF103190 42 165 1.69E-18 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 SUPERFAMILY SSF55890 321 389 4.84E-13 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 471 2.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 2.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 2.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 485 2.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 325 370 4.5E-12 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 SUPERFAMILY SSF55785 217 310 4.19E-10 T 14-10-2018 IPR035965 PAS domain superfamily Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 SMART SM00387 416 528 1.0E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 SUPERFAMILY SSF55874 392 525 1.06E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 Gene3D G3DSA:3.30.565.10 384 529 3.1E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 Gene3D G3DSA:3.30.450.20 32 168 1.9E-27 T 14-10-2018 Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 Gene3D G3DSA:3.30.450.20 200 312 9.3E-25 T 14-10-2018 Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 526 2.0E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_1714 ee9f03283670fde70f3d956bb3338b46 530 SMART SM00091 213 279 0.0012 T 14-10-2018 IPR000014 PAS domain Tlie_0066 fb070ee88a967d975954ec4cd2461c40 604 Gene3D G3DSA:2.40.170.20 163 604 3.7E-61 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Tlie_0066 fb070ee88a967d975954ec4cd2461c40 604 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 157 1.9E-27 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain Tlie_0066 fb070ee88a967d975954ec4cd2461c40 604 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 587 604 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site Tlie_0066 fb070ee88a967d975954ec4cd2461c40 604 Gene3D G3DSA:2.170.130.10 32 162 2.2E-36 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Tlie_0066 fb070ee88a967d975954ec4cd2461c40 604 Pfam PF00593 TonB dependent receptor 179 603 1.6E-40 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Tlie_0066 fb070ee88a967d975954ec4cd2461c40 604 SUPERFAMILY SSF56935 26 604 5.49E-107 T 14-10-2018 Tlie_1477 200f3a2e7e512e87c17ce2633f5ca747 326 Pfam PF02779 Transketolase, pyrimidine binding domain 15 180 3.9E-32 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tlie_1477 200f3a2e7e512e87c17ce2633f5ca747 326 ProSitePatterns PS00802 Transketolase signature 2. 124 140 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tlie_1477 200f3a2e7e512e87c17ce2633f5ca747 326 SUPERFAMILY SSF52922 187 321 5.23E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_1477 200f3a2e7e512e87c17ce2633f5ca747 326 Gene3D G3DSA:3.40.50.920 192 324 7.0E-47 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_1477 200f3a2e7e512e87c17ce2633f5ca747 326 SUPERFAMILY SSF52518 9 182 2.11E-52 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1477 200f3a2e7e512e87c17ce2633f5ca747 326 Pfam PF02780 Transketolase, C-terminal domain 192 312 7.7E-37 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Tlie_1477 200f3a2e7e512e87c17ce2633f5ca747 326 Gene3D G3DSA:3.40.50.970 1 188 4.3E-58 T 14-10-2018 Tlie_1477 200f3a2e7e512e87c17ce2633f5ca747 326 SMART SM00861 16 181 4.3E-50 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tlie_0653 280138949a4dbff9b770b7f3e69a9542 140 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 6.2E-60 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0653 280138949a4dbff9b770b7f3e69a9542 140 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.834 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0653 280138949a4dbff9b770b7f3e69a9542 140 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0653 280138949a4dbff9b770b7f3e69a9542 140 SUPERFAMILY SSF54686 1 137 2.09E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Tlie_0653 280138949a4dbff9b770b7f3e69a9542 140 Gene3D G3DSA:3.90.1170.10 1 138 2.0E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Tlie_0653 280138949a4dbff9b770b7f3e69a9542 140 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.0E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0653 280138949a4dbff9b770b7f3e69a9542 140 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.0E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0653 280138949a4dbff9b770b7f3e69a9542 140 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.0E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0653 280138949a4dbff9b770b7f3e69a9542 140 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.0E-38 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0653 280138949a4dbff9b770b7f3e69a9542 140 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0653 280138949a4dbff9b770b7f3e69a9542 140 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.3E-50 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Tlie_0885 929c8b02826b23768a540722459fdd8f 189 SUPERFAMILY SSF53323 8 183 3.92E-42 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tlie_0885 929c8b02826b23768a540722459fdd8f 189 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 176 3.7E-35 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Tlie_0885 929c8b02826b23768a540722459fdd8f 189 Gene3D G3DSA:3.40.920.10 6 188 1.1E-53 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tlie_1340 848e7136280c92eed8af8d4690204252 718 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 138 713 1.2E-142 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Tlie_1340 848e7136280c92eed8af8d4690204252 718 SUPERFAMILY SSF51998 139 698 2.9E-110 T 14-10-2018 Tlie_1340 848e7136280c92eed8af8d4690204252 718 Gene3D G3DSA:3.20.70.20 147 699 3.2E-111 T 14-10-2018 Tlie_1340 848e7136280c92eed8af8d4690204252 718 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 137 714 2.6E-132 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Tlie_1598 e63d393beb286fbfc1afd1b063ffb4eb 483 Pfam PF00474 Sodium:solute symporter family 31 413 1.1E-30 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Tlie_1598 e63d393beb286fbfc1afd1b063ffb4eb 483 Gene3D G3DSA:1.20.1730.10 21 479 8.6E-49 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Tlie_0827 64330822e25ef3f477dd84af58e76218 208 SUPERFAMILY SSF52266 40 204 1.01E-33 T 14-10-2018 Tlie_0827 64330822e25ef3f477dd84af58e76218 208 Gene3D G3DSA:3.40.50.1110 38 207 4.5E-40 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Tlie_0827 64330822e25ef3f477dd84af58e76218 208 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 43 194 4.7E-18 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Tlie_1026 2f3230d92d6506682374e2f62c2321a2 269 SUPERFAMILY SSF53213 7 259 2.75E-23 T 14-10-2018 Tlie_1026 2f3230d92d6506682374e2f62c2321a2 269 Gene3D G3DSA:3.40.830.10 3 262 2.3E-53 T 14-10-2018 Tlie_1026 2f3230d92d6506682374e2f62c2321a2 269 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 5 253 3.4E-26 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 Tlie_1702 c2477c8f4727f64a8508147de5d32ef3 306 SUPERFAMILY SSF53659 10 301 2.93E-65 T 14-10-2018 Tlie_1702 c2477c8f4727f64a8508147de5d32ef3 306 Pfam PF01515 Phosphate acetyl/butaryl transferase 11 79 4.7E-8 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Tlie_1702 c2477c8f4727f64a8508147de5d32ef3 306 Pfam PF01515 Phosphate acetyl/butaryl transferase 82 297 1.6E-51 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Tlie_1702 c2477c8f4727f64a8508147de5d32ef3 306 PIRSF PIRSF000428 2 306 3.6E-87 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Tlie_1702 c2477c8f4727f64a8508147de5d32ef3 306 TIGRFAM TIGR02706 P_butyryltrans: phosphate butyryltransferase 9 298 9.9E-126 T 14-10-2018 IPR014079 Phosphate butyryltransferase GO:0016740|GO:0019605|GO:0050182 KEGG: 00650+2.3.1.19 Tlie_1702 c2477c8f4727f64a8508147de5d32ef3 306 Gene3D G3DSA:3.40.718.10 4 302 1.0E-102 T 14-10-2018 Tlie_1407 1b06fd204c4e7f40490c34ac1e7fe539 388 SUPERFAMILY SSF56796 6 388 1.96E-116 T 14-10-2018 Tlie_1407 1b06fd204c4e7f40490c34ac1e7fe539 388 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 380 6.7E-114 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Tlie_1407 1b06fd204c4e7f40490c34ac1e7fe539 388 Gene3D G3DSA:3.40.50.1970 1 187 4.7E-53 T 14-10-2018 Tlie_1407 1b06fd204c4e7f40490c34ac1e7fe539 388 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 176 204 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Tlie_1407 1b06fd204c4e7f40490c34ac1e7fe539 388 Gene3D G3DSA:1.20.1090.10 189 388 5.5E-64 T 14-10-2018 Tlie_1806 50db10458bc99125fcf04ae62529e9fd 89 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 2.8E-13 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Tlie_1806 50db10458bc99125fcf04ae62529e9fd 89 SUPERFAMILY SSF143011 1 82 9.94E-24 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Tlie_1806 50db10458bc99125fcf04ae62529e9fd 89 Gene3D G3DSA:3.30.2310.20 1 84 6.8E-25 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Tlie_0801 5dbedfec8c9b4aebd5986bc1be03cc6f 210 SUPERFAMILY SSF46894 138 203 4.76E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tlie_0801 5dbedfec8c9b4aebd5986bc1be03cc6f 210 SUPERFAMILY SSF52172 3 132 6.97E-33 T 14-10-2018 IPR011006 CheY-like superfamily Tlie_0801 5dbedfec8c9b4aebd5986bc1be03cc6f 210 SMART SM00448 3 116 3.4E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0801 5dbedfec8c9b4aebd5986bc1be03cc6f 210 SMART SM00421 140 197 5.6E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_0801 5dbedfec8c9b4aebd5986bc1be03cc6f 210 Pfam PF00072 Response regulator receiver domain 5 117 1.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0801 5dbedfec8c9b4aebd5986bc1be03cc6f 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_0801 5dbedfec8c9b4aebd5986bc1be03cc6f 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_0801 5dbedfec8c9b4aebd5986bc1be03cc6f 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_0801 5dbedfec8c9b4aebd5986bc1be03cc6f 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_0801 5dbedfec8c9b4aebd5986bc1be03cc6f 210 Gene3D G3DSA:3.40.50.12740 3 203 2.7E-66 T 14-10-2018 Tlie_0801 5dbedfec8c9b4aebd5986bc1be03cc6f 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 197 1.8E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tlie_0440 a6bc88446115e082f9d2340ca5d7c842 310 Pfam PF00005 ABC transporter 21 164 3.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0440 a6bc88446115e082f9d2340ca5d7c842 310 Gene3D G3DSA:3.40.50.300 2 233 6.0E-63 T 14-10-2018 Tlie_0440 a6bc88446115e082f9d2340ca5d7c842 310 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0440 a6bc88446115e082f9d2340ca5d7c842 310 SUPERFAMILY SSF52540 6 223 3.04E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0440 a6bc88446115e082f9d2340ca5d7c842 310 SMART SM00382 29 241 3.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0477 438d52b866dbc2340fa995e9a7706695 254 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 103 227 8.6E-24 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Tlie_1077 c81eee8fdc1e7c665573f79708fe77f9 331 PIRSF PIRSF004532 4 323 9.4E-144 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Tlie_1077 c81eee8fdc1e7c665573f79708fe77f9 331 Gene3D G3DSA:3.40.190.90 126 287 8.7E-136 T 14-10-2018 Tlie_1077 c81eee8fdc1e7c665573f79708fe77f9 331 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 6 317 2.6E-125 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Tlie_1077 c81eee8fdc1e7c665573f79708fe77f9 331 Gene3D G3DSA:3.30.540.10 10 313 8.7E-136 T 14-10-2018 Tlie_1077 c81eee8fdc1e7c665573f79708fe77f9 331 SUPERFAMILY SSF56655 4 316 3.46E-109 T 14-10-2018 Tlie_1077 c81eee8fdc1e7c665573f79708fe77f9 331 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 6 313 1.5E-145 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Tlie_1670 4afe5f352dfa54fd230c500188ead019 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 5.4E-31 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tlie_1670 4afe5f352dfa54fd230c500188ead019 91 SMART SM00411 1 91 1.0E-38 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tlie_1670 4afe5f352dfa54fd230c500188ead019 91 SUPERFAMILY SSF47729 1 91 6.62E-29 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Tlie_1670 4afe5f352dfa54fd230c500188ead019 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.2E-12 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tlie_1670 4afe5f352dfa54fd230c500188ead019 91 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 7.2E-12 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tlie_1670 4afe5f352dfa54fd230c500188ead019 91 Gene3D G3DSA:4.10.520.10 1 91 2.7E-34 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Tlie_0221 bd1ef56a3cd6efaee240de5d29ea6524 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 417 5.2E-107 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tlie_0221 bd1ef56a3cd6efaee240de5d29ea6524 426 PIRSF PIRSF006066 2 426 2.2E-127 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_0221 bd1ef56a3cd6efaee240de5d29ea6524 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 422 4.8E-127 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_1298 84d1a51c421ea3400b5bf15204be7437 330 SUPERFAMILY SSF56042 159 325 4.34E-41 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tlie_1298 84d1a51c421ea3400b5bf15204be7437 330 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 4 330 1.3E-111 T 14-10-2018 IPR011854 Carbamoyl dehydratase HypE Tlie_1298 84d1a51c421ea3400b5bf15204be7437 330 SUPERFAMILY SSF55326 8 144 6.63E-24 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tlie_1298 84d1a51c421ea3400b5bf15204be7437 330 Pfam PF00586 AIR synthase related protein, N-terminal domain 36 143 2.4E-13 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Tlie_1298 84d1a51c421ea3400b5bf15204be7437 330 Gene3D G3DSA:3.30.1330.10 5 146 1.1E-39 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tlie_1298 84d1a51c421ea3400b5bf15204be7437 330 PIRSF PIRSF005644 1 330 2.7E-104 T 14-10-2018 IPR011854 Carbamoyl dehydratase HypE Tlie_1298 84d1a51c421ea3400b5bf15204be7437 330 Gene3D G3DSA:3.90.650.10 155 330 1.7E-53 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tlie_1298 84d1a51c421ea3400b5bf15204be7437 330 Pfam PF02769 AIR synthase related protein, C-terminal domain 159 306 2.7E-26 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Tlie_1856 19e7972f6e23f812c2bee65b80ed8bfd 239 SMART SM00873 62 220 9.0E-5 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Tlie_1856 19e7972f6e23f812c2bee65b80ed8bfd 239 Pfam PF03483 B3/4 domain 65 201 4.9E-13 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Tlie_1856 19e7972f6e23f812c2bee65b80ed8bfd 239 SUPERFAMILY SSF56037 53 224 1.39E-17 T 14-10-2018 Tlie_0487 89bbf8c0e35b9fb5339d064dbd6b4d87 128 Pfam PF01022 Bacterial regulatory protein, arsR family 50 96 2.2E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tlie_0487 89bbf8c0e35b9fb5339d064dbd6b4d87 128 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 3.7E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tlie_0487 89bbf8c0e35b9fb5339d064dbd6b4d87 128 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 92 107 3.7E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tlie_0487 89bbf8c0e35b9fb5339d064dbd6b4d87 128 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 75 3.7E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tlie_0487 89bbf8c0e35b9fb5339d064dbd6b4d87 128 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 77 92 3.7E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tlie_0487 89bbf8c0e35b9fb5339d064dbd6b4d87 128 Gene3D G3DSA:1.10.10.10 10 127 7.0E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0487 89bbf8c0e35b9fb5339d064dbd6b4d87 128 SUPERFAMILY SSF46785 30 124 9.44E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_0487 89bbf8c0e35b9fb5339d064dbd6b4d87 128 SMART SM00418 46 121 3.9E-30 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tlie_0016 fc84bfc738690021dfeadc95be47510f 262 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 5 258 1.9E-88 T 14-10-2018 Tlie_0016 fc84bfc738690021dfeadc95be47510f 262 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 253 1.8E-19 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Tlie_0016 fc84bfc738690021dfeadc95be47510f 262 SUPERFAMILY SSF56219 5 261 1.22E-68 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Tlie_0016 fc84bfc738690021dfeadc95be47510f 262 Gene3D G3DSA:3.60.10.10 4 262 1.5E-70 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Tlie_0016 fc84bfc738690021dfeadc95be47510f 262 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 5 259 2.0E-78 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Tlie_0235 b2deee7c023d1b93f0319b2f21d37b27 155 TIGRFAM TIGR01870 cas_TM1810_Csm2: CRISPR type III-A/MTUBE-associated protein Csm2 52 148 9.3E-14 T 14-10-2018 IPR010149 CRISPR-associated protein, Csm2 Type III-A Tlie_0235 b2deee7c023d1b93f0319b2f21d37b27 155 Pfam PF03750 Csm2 Type III-A 33 149 1.3E-26 T 14-10-2018 IPR010149 CRISPR-associated protein, Csm2 Type III-A Tlie_0833 42da1848d9ccc81c44dce25467057487 189 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 59 72 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Tlie_0833 42da1848d9ccc81c44dce25467057487 189 SUPERFAMILY SSF54211 86 175 6.96E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_0833 42da1848d9ccc81c44dce25467057487 189 Gene3D G3DSA:3.30.230.40 87 188 1.1E-29 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Tlie_0833 42da1848d9ccc81c44dce25467057487 189 SUPERFAMILY SSF54211 4 82 1.02E-21 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_0833 42da1848d9ccc81c44dce25467057487 189 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 1 188 30.487 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Tlie_0833 42da1848d9ccc81c44dce25467057487 189 Gene3D G3DSA:3.30.230.40 1 86 3.1E-26 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Tlie_0833 42da1848d9ccc81c44dce25467057487 189 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 171 4.7E-46 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Tlie_0950 541581a32b562a1c1c2a24ac0f2623c5 105 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 16 96 1.2E-29 T 14-10-2018 Tlie_0950 541581a32b562a1c1c2a24ac0f2623c5 105 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 61 69 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Tlie_0950 541581a32b562a1c1c2a24ac0f2623c5 105 SUPERFAMILY SSF54292 18 97 3.41E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tlie_0950 541581a32b562a1c1c2a24ac0f2623c5 105 Gene3D G3DSA:3.10.20.440 5 101 2.8E-30 T 14-10-2018 Tlie_1607 7c4b916ce7235a6a7ea43be81108c24e 450 Pfam PF02667 Short chain fatty acid transporter 1 446 1.8E-138 T 14-10-2018 IPR006160 Short chain fatty acid transporter AtoE Tlie_0318 c56939d7f08d1fbb170b6e4a0f7157bb 1216 Gene3D G3DSA:3.40.50.300 550 666 1.8E-14 T 14-10-2018 Tlie_0318 c56939d7f08d1fbb170b6e4a0f7157bb 1216 Pfam PF12705 PD-(D/E)XK nuclease superfamily 964 1203 1.9E-22 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Tlie_0318 c56939d7f08d1fbb170b6e4a0f7157bb 1216 Pfam PF13361 UvrD-like helicase C-terminal domain 478 884 3.6E-25 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Tlie_0318 c56939d7f08d1fbb170b6e4a0f7157bb 1216 Gene3D G3DSA:3.40.50.300 17 190 1.7E-34 T 14-10-2018 Tlie_0318 c56939d7f08d1fbb170b6e4a0f7157bb 1216 Gene3D G3DSA:3.40.50.300 742 936 1.9E-25 T 14-10-2018 Tlie_0318 c56939d7f08d1fbb170b6e4a0f7157bb 1216 SUPERFAMILY SSF52540 21 902 6.11E-103 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0318 c56939d7f08d1fbb170b6e4a0f7157bb 1216 Gene3D G3DSA:3.90.320.10 986 1159 3.1E-10 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Tlie_0318 c56939d7f08d1fbb170b6e4a0f7157bb 1216 SUPERFAMILY SSF52980 988 1151 3.22E-15 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Tlie_0318 c56939d7f08d1fbb170b6e4a0f7157bb 1216 Pfam PF00580 UvrD/REP helicase N-terminal domain 22 463 1.7E-54 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Tlie_0318 c56939d7f08d1fbb170b6e4a0f7157bb 1216 Gene3D G3DSA:3.40.50.300 366 498 4.5E-29 T 14-10-2018 Tlie_1686 5458d1191e9a49bfd6d09c2e6a7bc6fe 126 Pfam PF01042 Endoribonuclease L-PSP 7 124 2.5E-45 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Tlie_1686 5458d1191e9a49bfd6d09c2e6a7bc6fe 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 Tlie_1686 5458d1191e9a49bfd6d09c2e6a7bc6fe 126 Gene3D G3DSA:3.30.1330.40 1 126 4.2E-56 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Tlie_1686 5458d1191e9a49bfd6d09c2e6a7bc6fe 126 SUPERFAMILY SSF55298 1 125 5.97E-50 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Tlie_1686 5458d1191e9a49bfd6d09c2e6a7bc6fe 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 124 1.5E-54 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Tlie_0713 0fd3c49a42b1831d5c132c832b4c7064 220 Pfam PF01424 R3H domain 139 198 2.2E-14 T 14-10-2018 IPR001374 R3H domain GO:0003676 Tlie_0713 0fd3c49a42b1831d5c132c832b4c7064 220 SUPERFAMILY SSF82708 154 198 1.96E-8 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 Tlie_0713 0fd3c49a42b1831d5c132c832b4c7064 220 SMART SM01245 6 56 7.0E-6 T 14-10-2018 IPR032782 Jag, N-terminal Tlie_0713 0fd3c49a42b1831d5c132c832b4c7064 220 Gene3D G3DSA:3.30.300.20 60 128 2.7E-7 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Tlie_0713 0fd3c49a42b1831d5c132c832b4c7064 220 Gene3D G3DSA:3.30.1370.50 131 214 8.5E-25 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 Tlie_0713 0fd3c49a42b1831d5c132c832b4c7064 220 SMART SM00393 120 199 5.7E-15 T 14-10-2018 IPR001374 R3H domain GO:0003676 Tlie_0713 0fd3c49a42b1831d5c132c832b4c7064 220 Pfam PF13083 KH domain 65 128 1.4E-10 T 14-10-2018 Tlie_0713 0fd3c49a42b1831d5c132c832b4c7064 220 Pfam PF14804 Jag N-terminus 10 53 2.2E-7 T 14-10-2018 IPR032782 Jag, N-terminal Tlie_1387 f2108761d078e2c84606cf008ed6ef89 294 Gene3D G3DSA:2.30.30.60 132 181 5.2E-16 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Tlie_1387 f2108761d078e2c84606cf008ed6ef89 294 SUPERFAMILY SSF82861 20 115 5.75E-10 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Tlie_1387 f2108761d078e2c84606cf008ed6ef89 294 SUPERFAMILY SSF82689 182 283 1.44E-23 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Tlie_1387 f2108761d078e2c84606cf008ed6ef89 294 Gene3D G3DSA:3.30.70.100 184 270 2.4E-28 T 14-10-2018 Tlie_1387 f2108761d078e2c84606cf008ed6ef89 294 SUPERFAMILY SSF50182 116 178 4.9E-13 T 14-10-2018 IPR010920 LSM domain superfamily Tlie_1387 f2108761d078e2c84606cf008ed6ef89 294 Pfam PF00924 Mechanosensitive ion channel 75 272 3.8E-44 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Tlie_0517 3b3ec656d61dcfbacba928c4218e06b7 392 Gene3D G3DSA:3.90.1150.10 5 375 7.2E-157 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_0517 3b3ec656d61dcfbacba928c4218e06b7 392 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Tlie_0517 3b3ec656d61dcfbacba928c4218e06b7 392 Gene3D G3DSA:3.40.640.10 16 257 7.2E-157 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0517 3b3ec656d61dcfbacba928c4218e06b7 392 TIGRFAM TIGR03402 FeS_nifS: cysteine desulfurase NifS 5 385 1.2E-169 T 14-10-2018 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal GO:0006520|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Tlie_0517 3b3ec656d61dcfbacba928c4218e06b7 392 Pfam PF00266 Aminotransferase class-V 5 367 8.3E-87 T 14-10-2018 IPR000192 Aminotransferase class V domain Tlie_0517 3b3ec656d61dcfbacba928c4218e06b7 392 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 388 49.452 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Tlie_0517 3b3ec656d61dcfbacba928c4218e06b7 392 SUPERFAMILY SSF53383 4 377 2.53E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0517 3b3ec656d61dcfbacba928c4218e06b7 392 PIRSF PIRSF005572 2 383 3.0E-137 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Tlie_1424 4f73c3904a2f09027e2f791c5dd6208a 89 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 2.0E-33 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1424 4f73c3904a2f09027e2f791c5dd6208a 89 Pfam PF00886 Ribosomal protein S16 9 67 7.0E-26 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1424 4f73c3904a2f09027e2f791c5dd6208a 89 SUPERFAMILY SSF54565 2 84 4.05E-33 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1424 4f73c3904a2f09027e2f791c5dd6208a 89 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1424 4f73c3904a2f09027e2f791c5dd6208a 89 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 24.161 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1424 4f73c3904a2f09027e2f791c5dd6208a 89 Gene3D G3DSA:3.30.1320.10 1 89 6.8E-36 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0429 6e19e99dbf66ebcf3120ff0deb686f6f 75 Pfam PF03840 Preprotein translocase SecG subunit 5 72 4.4E-17 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tlie_0429 6e19e99dbf66ebcf3120ff0deb686f6f 75 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.1E-14 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tlie_0429 6e19e99dbf66ebcf3120ff0deb686f6f 75 PRINTS PR01651 Protein-export SecG membrane protein signature 54 75 2.1E-14 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tlie_0429 6e19e99dbf66ebcf3120ff0deb686f6f 75 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.1E-14 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tlie_0429 6e19e99dbf66ebcf3120ff0deb686f6f 75 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 72 2.9E-18 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tlie_1038 e8d72c14c9df3ff9128af664ffe239f1 249 SUPERFAMILY SSF56317 8 247 1.44E-28 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tlie_1038 e8d72c14c9df3ff9128af664ffe239f1 249 Gene3D G3DSA:3.60.110.10 2 247 2.0E-32 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tlie_1038 e8d72c14c9df3ff9128af664ffe239f1 249 Pfam PF00795 Carbon-nitrogen hydrolase 12 227 4.2E-12 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Tlie_1636 d73d5925730553c7c0695f069365ab09 421 SUPERFAMILY SSF56954 4 414 3.14E-72 T 14-10-2018 Tlie_1636 d73d5925730553c7c0695f069365ab09 421 PIRSF PIRSF001892 11 91 1.6E-6 T 14-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 Tlie_1636 d73d5925730553c7c0695f069365ab09 421 PIRSF PIRSF001892 76 421 1.1E-52 T 14-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 Tlie_1636 d73d5925730553c7c0695f069365ab09 421 Gene3D G3DSA:1.20.1600.10 17 419 1.4E-74 T 14-10-2018 Tlie_1636 d73d5925730553c7c0695f069365ab09 421 Pfam PF02321 Outer membrane efflux protein 29 206 5.7E-31 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tlie_1636 d73d5925730553c7c0695f069365ab09 421 Pfam PF02321 Outer membrane efflux protein 237 413 9.8E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tlie_0380 4f0dd4bfd6d1db54e0177e5791bab483 306 Pfam PF00892 EamA-like transporter family 5 133 4.3E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tlie_0380 4f0dd4bfd6d1db54e0177e5791bab483 306 Pfam PF00892 EamA-like transporter family 148 284 2.1E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tlie_0380 4f0dd4bfd6d1db54e0177e5791bab483 306 SUPERFAMILY SSF103481 42 135 2.48E-7 T 14-10-2018 Tlie_0380 4f0dd4bfd6d1db54e0177e5791bab483 306 SUPERFAMILY SSF103481 184 289 3.27E-12 T 14-10-2018 Tlie_1621 425fddc945452d71db7e996ca9853809 158 Gene3D G3DSA:3.40.30.10 75 157 4.9E-32 T 14-10-2018 Tlie_1621 425fddc945452d71db7e996ca9853809 158 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 158 1.2E-42 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1621 425fddc945452d71db7e996ca9853809 158 Gene3D G3DSA:1.10.10.1590 6 74 3.6E-17 T 14-10-2018 Tlie_1621 425fddc945452d71db7e996ca9853809 158 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 15 157 7.3E-53 T 14-10-2018 Tlie_1621 425fddc945452d71db7e996ca9853809 158 SUPERFAMILY SSF52833 9 157 1.79E-52 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tlie_1621 425fddc945452d71db7e996ca9853809 158 PIRSF PIRSF000216 2 158 1.2E-56 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1006 1fe7450beabc2bec03d185478602e4ae 396 SUPERFAMILY SSF46689 20 121 6.45E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_1006 1fe7450beabc2bec03d185478602e4ae 396 SUPERFAMILY SSF53098 178 330 1.05E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_0010 6de36e102c4f0c333600485ebccc73b2 441 SUPERFAMILY SSF51556 51 375 6.09E-45 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tlie_0010 6de36e102c4f0c333600485ebccc73b2 441 SUPERFAMILY SSF51338 8 427 2.16E-16 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tlie_0010 6de36e102c4f0c333600485ebccc73b2 441 Pfam PF07969 Amidohydrolase family 223 423 5.6E-14 T 14-10-2018 IPR013108 Amidohydrolase 3 Tlie_0633 122d6f39b6e2d00b1f62cf0c97596d91 278 PIRSF PIRSF005917 1 275 2.6E-88 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Tlie_0633 122d6f39b6e2d00b1f62cf0c97596d91 278 Gene3D G3DSA:3.40.1010.10 1 106 9.5E-43 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Tlie_0633 122d6f39b6e2d00b1f62cf0c97596d91 278 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 217 33.678 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Tlie_0633 122d6f39b6e2d00b1f62cf0c97596d91 278 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 2 266 2.5E-70 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Tlie_0633 122d6f39b6e2d00b1f62cf0c97596d91 278 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 77 88 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 Tlie_0633 122d6f39b6e2d00b1f62cf0c97596d91 278 SUPERFAMILY SSF53790 2 215 6.94E-72 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Tlie_0633 122d6f39b6e2d00b1f62cf0c97596d91 278 Gene3D G3DSA:3.30.950.10 107 220 7.6E-32 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Tlie_0633 122d6f39b6e2d00b1f62cf0c97596d91 278 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 196 6.5E-29 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Tlie_1542 1ac02e5f2b0b312ed41e1db30a806804 350 Gene3D G3DSA:3.40.190.170 28 348 3.2E-110 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Tlie_1542 1ac02e5f2b0b312ed41e1db30a806804 350 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 42 297 2.3E-52 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Tlie_1542 1ac02e5f2b0b312ed41e1db30a806804 350 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 43 321 1.1E-78 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Tlie_1542 1ac02e5f2b0b312ed41e1db30a806804 350 PIRSF PIRSF006470 4 341 2.5E-65 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Tlie_1546 3bb9fc4ad0efc4f2d223c4aec57f9c87 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 30 182 6.8E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tlie_1546 3bb9fc4ad0efc4f2d223c4aec57f9c87 601 Pfam PF07664 Ferrous iron transport protein B C terminus 421 470 7.6E-11 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 Tlie_1546 3bb9fc4ad0efc4f2d223c4aec57f9c87 601 SUPERFAMILY SSF52540 31 195 5.77E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1546 3bb9fc4ad0efc4f2d223c4aec57f9c87 601 Gene3D G3DSA:3.40.50.300 28 224 2.9E-45 T 14-10-2018 Tlie_1546 3bb9fc4ad0efc4f2d223c4aec57f9c87 601 Pfam PF07670 Nucleoside recognition 318 413 9.5E-12 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Tlie_1546 3bb9fc4ad0efc4f2d223c4aec57f9c87 601 Pfam PF07670 Nucleoside recognition 475 574 7.1E-14 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Tlie_1546 3bb9fc4ad0efc4f2d223c4aec57f9c87 601 Pfam PF02421 Ferrous iron transport protein B 31 182 5.0E-52 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 Tlie_0790 7b2bcc56ad72b133d0a6ca077692f44d 471 Pfam PF00860 Permease family 30 415 2.2E-77 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Tlie_0790 7b2bcc56ad72b133d0a6ca077692f44d 471 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 364 384 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Tlie_1526 d8b43278a023b0a84ecff30051625934 153 PRINTS PR01438 Universal stress protein signature 107 119 3.1E-12 T 14-10-2018 IPR006015 Universal stress protein A Tlie_1526 d8b43278a023b0a84ecff30051625934 153 PRINTS PR01438 Universal stress protein signature 125 147 3.1E-12 T 14-10-2018 IPR006015 Universal stress protein A Tlie_1526 d8b43278a023b0a84ecff30051625934 153 PRINTS PR01438 Universal stress protein signature 2 20 3.1E-12 T 14-10-2018 IPR006015 Universal stress protein A Tlie_1526 d8b43278a023b0a84ecff30051625934 153 SUPERFAMILY SSF52402 3 147 2.34E-33 T 14-10-2018 Tlie_1526 d8b43278a023b0a84ecff30051625934 153 Pfam PF00582 Universal stress protein family 3 145 5.7E-28 T 14-10-2018 IPR006016 UspA Tlie_1526 d8b43278a023b0a84ecff30051625934 153 Gene3D G3DSA:3.40.50.620 2 147 1.2E-32 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_0258 fb59f5a017da9dffd28355e96009ecbc 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.6E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0258 fb59f5a017da9dffd28355e96009ecbc 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.6E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0258 fb59f5a017da9dffd28355e96009ecbc 249 SUPERFAMILY SSF46785 4 73 7.76E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_0258 fb59f5a017da9dffd28355e96009ecbc 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 1.5E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0258 fb59f5a017da9dffd28355e96009ecbc 249 SUPERFAMILY SSF48008 75 219 1.44E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0258 fb59f5a017da9dffd28355e96009ecbc 249 Gene3D G3DSA:1.10.10.10 2 69 1.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0258 fb59f5a017da9dffd28355e96009ecbc 249 Pfam PF07729 FCD domain 79 213 3.2E-22 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_0258 fb59f5a017da9dffd28355e96009ecbc 249 SMART SM00345 11 69 1.1E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0258 fb59f5a017da9dffd28355e96009ecbc 249 Gene3D G3DSA:1.20.120.530 73 223 1.2E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tlie_0258 fb59f5a017da9dffd28355e96009ecbc 249 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 40 59 9.7E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Tlie_0258 fb59f5a017da9dffd28355e96009ecbc 249 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 40 9.7E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Tlie_0258 fb59f5a017da9dffd28355e96009ecbc 249 SMART SM00895 79 214 1.3E-18 T 14-10-2018 IPR011711 GntR, C-terminal Tlie_0198 b0a2c42dd7fb223fefb3130b897f8728 176 SUPERFAMILY SSF47148 42 174 3.14E-54 T 14-10-2018 IPR036091 Propanediol/glycerol dehydratase, small subunit superfamily KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 Tlie_0198 b0a2c42dd7fb223fefb3130b897f8728 176 Gene3D G3DSA:1.10.1510.20 85 176 9.5E-39 T 14-10-2018 IPR036091 Propanediol/glycerol dehydratase, small subunit superfamily KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 Tlie_0198 b0a2c42dd7fb223fefb3130b897f8728 176 PIRSF PIRSF018505 5 176 5.4E-62 T 14-10-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 Tlie_0198 b0a2c42dd7fb223fefb3130b897f8728 176 Pfam PF02287 Dehydratase small subunit 43 174 2.0E-60 T 14-10-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 Tlie_0351 d10f15c54a2d27055e011ecc6a73a8d3 327 Gene3D G3DSA:1.10.3720.10 91 313 1.8E-16 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_0351 d10f15c54a2d27055e011ecc6a73a8d3 327 SUPERFAMILY SSF161098 93 304 1.96E-12 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_0351 d10f15c54a2d27055e011ecc6a73a8d3 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 321 1.1E-37 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tlie_0905 8c28b905d7de59c0ee4fa07ff5a6c917 157 SMART SM00116 14 62 0.091 T 14-10-2018 IPR000644 CBS domain Tlie_0905 8c28b905d7de59c0ee4fa07ff5a6c917 157 SMART SM00116 101 148 7.5E-9 T 14-10-2018 IPR000644 CBS domain Tlie_0905 8c28b905d7de59c0ee4fa07ff5a6c917 157 Gene3D G3DSA:3.10.580.10 3 151 7.3E-35 T 14-10-2018 Tlie_0905 8c28b905d7de59c0ee4fa07ff5a6c917 157 Pfam PF00571 CBS domain 94 148 8.2E-15 T 14-10-2018 IPR000644 CBS domain Tlie_0905 8c28b905d7de59c0ee4fa07ff5a6c917 157 Pfam PF00571 CBS domain 7 59 7.0E-8 T 14-10-2018 IPR000644 CBS domain Tlie_0905 8c28b905d7de59c0ee4fa07ff5a6c917 157 SUPERFAMILY SSF54631 4 147 2.4E-31 T 14-10-2018 Tlie_1234 2df528807e126773d094e4c62e1bd16e 350 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 7 322 7.7E-34 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Tlie_1234 2df528807e126773d094e4c62e1bd16e 350 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 14 328 3.2E-30 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Tlie_0120 40a4b3fc9c2cb99da38fff639a280416 695 Gene3D G3DSA:1.20.1480.50 301 394 2.4E-7 T 14-10-2018 Tlie_0120 40a4b3fc9c2cb99da38fff639a280416 695 SUPERFAMILY SSF58104 418 693 8.5E-58 T 14-10-2018 Tlie_0120 40a4b3fc9c2cb99da38fff639a280416 695 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 478 643 2.3E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tlie_0120 40a4b3fc9c2cb99da38fff639a280416 695 Gene3D G3DSA:3.30.450.20 219 274 2.7E-12 T 14-10-2018 Tlie_0120 40a4b3fc9c2cb99da38fff639a280416 695 Pfam PF02743 Cache domain 96 275 3.3E-13 T 14-10-2018 IPR033479 Double Cache domain 1 Tlie_0120 40a4b3fc9c2cb99da38fff639a280416 695 SMART SM00283 418 693 3.9E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tlie_0120 40a4b3fc9c2cb99da38fff639a280416 695 Gene3D G3DSA:1.10.287.950 419 693 1.5E-57 T 14-10-2018 Tlie_0120 40a4b3fc9c2cb99da38fff639a280416 695 Gene3D G3DSA:3.30.450.20 155 218 2.7E-12 T 14-10-2018 Tlie_1573 32eab317c84e65ec04100f09a44febc0 336 SUPERFAMILY SSF51735 8 333 9.59E-92 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1573 32eab317c84e65ec04100f09a44febc0 336 Gene3D G3DSA:3.90.25.10 188 328 1.8E-104 T 14-10-2018 Tlie_1573 32eab317c84e65ec04100f09a44febc0 336 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 2.8E-11 T 14-10-2018 Tlie_1573 32eab317c84e65ec04100f09a44febc0 336 PRINTS PR01713 Nucleotide sugar epimerase signature 228 243 2.8E-11 T 14-10-2018 Tlie_1573 32eab317c84e65ec04100f09a44febc0 336 PRINTS PR01713 Nucleotide sugar epimerase signature 251 266 2.8E-11 T 14-10-2018 Tlie_1573 32eab317c84e65ec04100f09a44febc0 336 Gene3D G3DSA:3.40.50.720 17 316 1.8E-104 T 14-10-2018 Tlie_1573 32eab317c84e65ec04100f09a44febc0 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 17 325 4.4E-57 T 14-10-2018 IPR016040 NAD(P)-binding domain Tlie_0777 cf2f83e0a72af0f642837a13cc02907d 162 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 127 137 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site Tlie_0777 cf2f83e0a72af0f642837a13cc02907d 162 SUPERFAMILY SSF55486 32 157 8.55E-36 T 14-10-2018 Tlie_0777 cf2f83e0a72af0f642837a13cc02907d 162 Gene3D G3DSA:3.40.390.30 12 162 7.2E-38 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Tlie_0777 cf2f83e0a72af0f642837a13cc02907d 162 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 162 20.267 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Tlie_0777 cf2f83e0a72af0f642837a13cc02907d 162 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 47 157 7.0E-33 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Tlie_0777 cf2f83e0a72af0f642837a13cc02907d 162 Pfam PF02130 Uncharacterized protein family UPF0054 23 157 1.5E-33 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Tlie_0600 a427f2c2f42f47a497acbf4bd5fdb0ed 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Tlie_0600 a427f2c2f42f47a497acbf4bd5fdb0ed 96 Gene3D G3DSA:2.30.33.40 1 96 7.9E-41 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Tlie_0600 a427f2c2f42f47a497acbf4bd5fdb0ed 96 SMART SM00883 2 94 3.1E-58 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tlie_0600 a427f2c2f42f47a497acbf4bd5fdb0ed 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 6.9E-38 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tlie_0600 a427f2c2f42f47a497acbf4bd5fdb0ed 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 28.421 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tlie_0600 a427f2c2f42f47a497acbf4bd5fdb0ed 96 PRINTS PR00297 10kDa chaperonin signature 81 94 2.9E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tlie_0600 a427f2c2f42f47a497acbf4bd5fdb0ed 96 PRINTS PR00297 10kDa chaperonin signature 25 46 2.9E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tlie_0600 a427f2c2f42f47a497acbf4bd5fdb0ed 96 PRINTS PR00297 10kDa chaperonin signature 60 72 2.9E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tlie_0600 a427f2c2f42f47a497acbf4bd5fdb0ed 96 PRINTS PR00297 10kDa chaperonin signature 3 18 2.9E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tlie_0600 a427f2c2f42f47a497acbf4bd5fdb0ed 96 SUPERFAMILY SSF50129 1 95 2.26E-37 T 14-10-2018 IPR011032 GroES-like superfamily Tlie_0991 530dc96aa45c0c84945b06dbd9bf814f 295 Pfam PF03668 P-loop ATPase protein family 9 290 2.3E-90 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 Tlie_0991 530dc96aa45c0c84945b06dbd9bf814f 295 Gene3D G3DSA:3.40.50.300 1 169 3.4E-8 T 14-10-2018 Tlie_0991 530dc96aa45c0c84945b06dbd9bf814f 295 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 7 289 37.614 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 Tlie_0991 530dc96aa45c0c84945b06dbd9bf814f 295 SUPERFAMILY SSF52540 8 161 5.88E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0991 530dc96aa45c0c84945b06dbd9bf814f 295 PIRSF PIRSF005052 7 292 7.4E-98 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 Tlie_1301 0e2c695c5e0a75b3362140dfd5b63919 145 Hamap MF_01114 Regulatory protein RecX [recX]. 2 144 12.162 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Tlie_1301 0e2c695c5e0a75b3362140dfd5b63919 145 Gene3D G3DSA:1.10.10.2800 1 53 3.2E-6 T 14-10-2018 Tlie_1301 0e2c695c5e0a75b3362140dfd5b63919 145 Pfam PF02631 RecX family 30 139 1.9E-17 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Tlie_1687 5b6da4bf6b262118a72d15a20d58c4de 275 Gene3D G3DSA:3.20.20.70 1 251 3.4E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1687 5b6da4bf6b262118a72d15a20d58c4de 275 SUPERFAMILY SSF51621 3 195 2.86E-83 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tlie_1687 5b6da4bf6b262118a72d15a20d58c4de 275 PIRSF PIRSF034452 1 275 1.7E-153 T 14-10-2018 IPR009215 TIM-barrel domain, IGPS-like Tlie_1687 5b6da4bf6b262118a72d15a20d58c4de 275 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 7 272 3.0E-131 T 14-10-2018 IPR009215 TIM-barrel domain, IGPS-like Tlie_1223 7d0cca94271882ac3824d07c9c08d345 152 SUPERFAMILY SSF55729 6 150 7.7E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tlie_1223 7d0cca94271882ac3824d07c9c08d345 152 Gene3D G3DSA:3.40.630.30 3 151 2.5E-30 T 14-10-2018 Tlie_1223 7d0cca94271882ac3824d07c9c08d345 152 Pfam PF13508 Acetyltransferase (GNAT) domain 42 129 1.9E-8 T 14-10-2018 IPR000182 GNAT domain Tlie_1790 47ef78e7acfb7a653e9332eea62d8ef1 290 Gene3D G3DSA:1.20.1260.10 2 131 2.5E-6 T 14-10-2018 IPR012347 Ferritin-like Tlie_1790 47ef78e7acfb7a653e9332eea62d8ef1 290 Pfam PF01988 VIT family 138 194 4.0E-9 T 14-10-2018 IPR008217 Ccc1 family Tlie_1790 47ef78e7acfb7a653e9332eea62d8ef1 290 Pfam PF01988 VIT family 197 279 6.0E-7 T 14-10-2018 IPR008217 Ccc1 family Tlie_1790 47ef78e7acfb7a653e9332eea62d8ef1 290 SUPERFAMILY SSF47240 4 129 1.08E-15 T 14-10-2018 IPR009078 Ferritin-like superfamily Tlie_0935 bbe31137742f55ed5175773fbb05ce61 329 SUPERFAMILY SSF55174 34 85 2.31E-8 T 14-10-2018 Tlie_0935 bbe31137742f55ed5175773fbb05ce61 329 SUPERFAMILY SSF55120 93 317 3.5E-75 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0935 bbe31137742f55ed5175773fbb05ce61 329 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 153 167 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0935 bbe31137742f55ed5175773fbb05ce61 329 Gene3D G3DSA:3.10.290.10 22 89 7.0E-14 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tlie_0935 bbe31137742f55ed5175773fbb05ce61 329 SMART SM00363 34 91 1.4E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0935 bbe31137742f55ed5175773fbb05ce61 329 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 31 317 9.6E-84 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0935 bbe31137742f55ed5175773fbb05ce61 329 Pfam PF00849 RNA pseudouridylate synthase 107 260 2.5E-33 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0935 bbe31137742f55ed5175773fbb05ce61 329 Gene3D G3DSA:3.30.2350.10 90 310 1.0E-75 T 14-10-2018 Tlie_0625 5a8d4e835da9962eb5144ef1c3224bd6 266 Gene3D G3DSA:3.40.50.300 3 250 1.2E-70 T 14-10-2018 Tlie_0625 5a8d4e835da9962eb5144ef1c3224bd6 266 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 4 264 1.2E-119 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 Tlie_0625 5a8d4e835da9962eb5144ef1c3224bd6 266 PIRSF PIRSF003092 1 266 4.3E-93 T 14-10-2018 IPR025501 ATP binding protein MinD Tlie_0625 5a8d4e835da9962eb5144ef1c3224bd6 266 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 219 2.5E-24 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tlie_0625 5a8d4e835da9962eb5144ef1c3224bd6 266 SUPERFAMILY SSF52540 3 247 2.63E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1033 7a76ea5d35e1b1a490f672037e277fed 171 Gene3D G3DSA:3.30.420.10 3 160 1.3E-44 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tlie_1033 7a76ea5d35e1b1a490f672037e277fed 171 SUPERFAMILY SSF53098 4 154 1.56E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_1033 7a76ea5d35e1b1a490f672037e277fed 171 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 5 151 5.7E-39 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tlie_1033 7a76ea5d35e1b1a490f672037e277fed 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 4.2E-26 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tlie_1033 7a76ea5d35e1b1a490f672037e277fed 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 4.2E-26 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tlie_1033 7a76ea5d35e1b1a490f672037e277fed 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 4.2E-26 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tlie_1033 7a76ea5d35e1b1a490f672037e277fed 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 4.2E-26 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tlie_1033 7a76ea5d35e1b1a490f672037e277fed 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 4.2E-26 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tlie_1033 7a76ea5d35e1b1a490f672037e277fed 171 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 5 151 7.0E-31 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tlie_1033 7a76ea5d35e1b1a490f672037e277fed 171 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 155 37.123 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tlie_0956 2554703ca93417d0c83d11754e31d55c 377 Gene3D G3DSA:3.40.50.920 267 377 7.7E-24 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_0956 2554703ca93417d0c83d11754e31d55c 377 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 275 369 9.2E-26 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Tlie_0956 2554703ca93417d0c83d11754e31d55c 377 SUPERFAMILY SSF52922 269 375 7.0E-23 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_0956 2554703ca93417d0c83d11754e31d55c 377 Gene3D G3DSA:3.40.50.970 1 193 6.5E-75 T 14-10-2018 Tlie_0956 2554703ca93417d0c83d11754e31d55c 377 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 245 2.7E-69 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Tlie_0956 2554703ca93417d0c83d11754e31d55c 377 SUPERFAMILY SSF52518 4 258 4.12E-72 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1537 4d1780f41e3687f1fbf6039f9706f93f 282 SUPERFAMILY SSF54862 59 131 4.4E-19 T 14-10-2018 Tlie_1537 4d1780f41e3687f1fbf6039f9706f93f 282 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 257 4.5E-15 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tlie_1537 4d1780f41e3687f1fbf6039f9706f93f 282 SUPERFAMILY SSF52540 5 279 9.86E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1537 4d1780f41e3687f1fbf6039f9706f93f 282 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 98 109 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_1537 4d1780f41e3687f1fbf6039f9706f93f 282 Pfam PF14697 4Fe-4S dicluster domain 63 113 4.8E-9 T 14-10-2018 Tlie_1537 4d1780f41e3687f1fbf6039f9706f93f 282 Gene3D G3DSA:3.30.70.20 57 117 6.2E-13 T 14-10-2018 Tlie_1410 e09a6813c6afb312b947f5cd66e201a3 612 Gene3D G3DSA:1.20.140.70 37 191 8.8E-53 T 14-10-2018 Tlie_1410 e09a6813c6afb312b947f5cd66e201a3 612 Gene3D G3DSA:1.10.287.830 193 239 3.1E-16 T 14-10-2018 Tlie_1410 e09a6813c6afb312b947f5cd66e201a3 612 Pfam PF01432 Peptidase family M3 217 596 2.5E-68 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Tlie_1410 e09a6813c6afb312b947f5cd66e201a3 612 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 19 607 1.1E-183 T 14-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 Tlie_1410 e09a6813c6afb312b947f5cd66e201a3 612 Gene3D G3DSA:1.10.1370.20 240 612 1.4E-132 T 14-10-2018 Tlie_1410 e09a6813c6afb312b947f5cd66e201a3 612 SUPERFAMILY SSF55486 14 585 4.54E-121 T 14-10-2018 Tlie_1410 e09a6813c6afb312b947f5cd66e201a3 612 Pfam PF08439 Oligopeptidase F 126 195 4.8E-22 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain Tlie_0903 fe67f62d87041b753b1a0b349fdb50a7 423 SUPERFAMILY SSF55681 116 420 8.36E-104 T 14-10-2018 Tlie_0903 fe67f62d87041b753b1a0b349fdb50a7 423 Gene3D G3DSA:3.30.930.10 105 423 4.9E-130 T 14-10-2018 Tlie_0903 fe67f62d87041b753b1a0b349fdb50a7 423 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 399 9.5E-39 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_0903 fe67f62d87041b753b1a0b349fdb50a7 423 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 2.6E-172 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tlie_0903 fe67f62d87041b753b1a0b349fdb50a7 423 PIRSF PIRSF001529 1 423 7.6E-182 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tlie_0903 fe67f62d87041b753b1a0b349fdb50a7 423 Gene3D G3DSA:1.10.287.40 1 104 2.3E-27 T 14-10-2018 Tlie_0903 fe67f62d87041b753b1a0b349fdb50a7 423 SUPERFAMILY SSF46589 1 112 5.23E-32 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Tlie_0903 fe67f62d87041b753b1a0b349fdb50a7 423 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.6E-30 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Tlie_0903 fe67f62d87041b753b1a0b349fdb50a7 423 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 6.0E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tlie_0903 fe67f62d87041b753b1a0b349fdb50a7 423 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 6.0E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tlie_0903 fe67f62d87041b753b1a0b349fdb50a7 423 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 6.0E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tlie_0903 fe67f62d87041b753b1a0b349fdb50a7 423 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 6.0E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tlie_0903 fe67f62d87041b753b1a0b349fdb50a7 423 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 6.0E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tlie_0903 fe67f62d87041b753b1a0b349fdb50a7 423 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 42.541 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 Gene3D G3DSA:1.25.40.10 129 221 4.5E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 Gene3D G3DSA:1.25.40.10 222 376 2.1E-35 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 Gene3D G3DSA:1.25.40.10 23 128 1.0E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 SMART SM00028 232 265 2.7E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 SMART SM00028 164 197 5.7E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 SMART SM00028 130 163 6.9E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 SMART SM00028 300 333 2.1E-8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 SMART SM00028 198 231 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 SMART SM00028 62 95 2.6E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 SMART SM00028 266 299 0.047 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 SMART SM00028 96 129 1.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 SMART SM00028 28 61 1.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 Pfam PF00515 Tetratricopeptide repeat 62 95 4.7E-8 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 Pfam PF00515 Tetratricopeptide repeat 301 333 4.7E-10 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 Pfam PF00515 Tetratricopeptide repeat 232 265 1.2E-8 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 Pfam PF13181 Tetratricopeptide repeat 31 60 0.051 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 Pfam PF13181 Tetratricopeptide repeat 132 162 0.031 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 Pfam PF13181 Tetratricopeptide repeat 269 297 0.068 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 SUPERFAMILY SSF48452 28 264 2.09E-43 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 SUPERFAMILY SSF48452 165 346 3.15E-35 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_1909 5ce4b30d59609b6ea47fac06dd906c1d 377 Pfam PF13414 TPR repeat 180 212 4.7E-9 T 14-10-2018 Tlie_0132 b2df09bf5db4b747e363ef5230c30c64 163 Pfam PF02623 FliW protein 21 140 6.2E-30 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 Tlie_0132 b2df09bf5db4b747e363ef5230c30c64 163 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 19 143 18.736 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 Tlie_0132 b2df09bf5db4b747e363ef5230c30c64 163 Gene3D G3DSA:2.30.290.10 2 152 1.2E-40 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Tlie_0132 b2df09bf5db4b747e363ef5230c30c64 163 SUPERFAMILY SSF141457 4 145 3.79E-32 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Tlie_1658 5962c39a39b6ce7b26bf916e7d7164b7 281 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 276 1.4E-56 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tlie_1658 5962c39a39b6ce7b26bf916e7d7164b7 281 SUPERFAMILY SSF54506 152 275 1.05E-26 T 14-10-2018 Tlie_1658 5962c39a39b6ce7b26bf916e7d7164b7 281 Pfam PF01678 Diaminopimelate epimerase 152 268 1.1E-11 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tlie_1658 5962c39a39b6ce7b26bf916e7d7164b7 281 Pfam PF01678 Diaminopimelate epimerase 3 112 1.1E-21 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tlie_1658 5962c39a39b6ce7b26bf916e7d7164b7 281 SUPERFAMILY SSF54506 1 121 2.51E-29 T 14-10-2018 Tlie_1658 5962c39a39b6ce7b26bf916e7d7164b7 281 Gene3D G3DSA:3.10.310.10 2 274 2.4E-67 T 14-10-2018 Tlie_1658 5962c39a39b6ce7b26bf916e7d7164b7 281 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 278 28.167 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tlie_1658 5962c39a39b6ce7b26bf916e7d7164b7 281 Gene3D G3DSA:3.10.310.10 115 265 2.4E-67 T 14-10-2018 Tlie_1512 04bb14f3bfd7592c99bbfffffef8a8c1 260 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 140 160 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site Tlie_1512 04bb14f3bfd7592c99bbfffffef8a8c1 260 Pfam PF00795 Carbon-nitrogen hydrolase 2 244 1.6E-49 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Tlie_1512 04bb14f3bfd7592c99bbfffffef8a8c1 260 Gene3D G3DSA:3.60.110.10 1 259 5.6E-94 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tlie_1512 04bb14f3bfd7592c99bbfffffef8a8c1 260 SUPERFAMILY SSF56317 1 260 4.06E-79 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tlie_1654 e62fbb8267f50035a5113b26a51fe9c0 525 SMART SM00487 2 184 7.4E-14 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tlie_1654 e62fbb8267f50035a5113b26a51fe9c0 525 Gene3D G3DSA:3.40.50.300 177 344 6.0E-34 T 14-10-2018 Tlie_1654 e62fbb8267f50035a5113b26a51fe9c0 525 SUPERFAMILY SSF52540 18 336 8.24E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1654 e62fbb8267f50035a5113b26a51fe9c0 525 Gene3D G3DSA:3.40.50.300 1 176 1.8E-32 T 14-10-2018 Tlie_1654 e62fbb8267f50035a5113b26a51fe9c0 525 Pfam PF00271 Helicase conserved C-terminal domain 251 326 2.4E-7 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_1654 e62fbb8267f50035a5113b26a51fe9c0 525 Pfam PF00270 DEAD/DEAH box helicase 8 155 1.7E-9 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tlie_1654 e62fbb8267f50035a5113b26a51fe9c0 525 SMART SM00490 242 326 4.9E-16 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_1370 9f20c5be1378a19b0a0d161d9bcf97af 295 PIRSF PIRSF003097 1 290 1.7E-64 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Tlie_0788 8a933ec5aefe02aa0ee9b89e4500796f 452 Pfam PF13518 Helix-turn-helix domain 15 66 6.4E-8 T 14-10-2018 Tlie_0788 8a933ec5aefe02aa0ee9b89e4500796f 452 Pfam PF00665 Integrase core domain 143 271 3.9E-9 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tlie_0788 8a933ec5aefe02aa0ee9b89e4500796f 452 SUPERFAMILY SSF53098 143 302 8.5E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_0788 8a933ec5aefe02aa0ee9b89e4500796f 452 Gene3D G3DSA:3.30.420.10 129 313 1.1E-14 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tlie_0788 8a933ec5aefe02aa0ee9b89e4500796f 452 SUPERFAMILY SSF46689 14 118 3.23E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_1344 6b9ba33e7bc0b2496fc4be4afcb3e6eb 113 SUPERFAMILY SSF54197 2 112 6.1E-35 T 14-10-2018 IPR036265 HIT-like superfamily Tlie_1344 6b9ba33e7bc0b2496fc4be4afcb3e6eb 113 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 14-10-2018 IPR019808 Histidine triad, conserved site Tlie_1344 6b9ba33e7bc0b2496fc4be4afcb3e6eb 113 Gene3D G3DSA:3.30.428.10 1 113 6.8E-40 T 14-10-2018 IPR036265 HIT-like superfamily Tlie_1344 6b9ba33e7bc0b2496fc4be4afcb3e6eb 113 PRINTS PR00332 Histidine triad family signature 6 22 5.8E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Tlie_1344 6b9ba33e7bc0b2496fc4be4afcb3e6eb 113 PRINTS PR00332 Histidine triad family signature 27 45 5.8E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Tlie_1344 6b9ba33e7bc0b2496fc4be4afcb3e6eb 113 PRINTS PR00332 Histidine triad family signature 93 103 5.8E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Tlie_1344 6b9ba33e7bc0b2496fc4be4afcb3e6eb 113 Pfam PF01230 HIT domain 13 107 6.2E-29 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Tlie_0773 4364bfbeb96437e24e04e4e1fe5f5b03 498 SUPERFAMILY SSF89000 331 474 1.49E-49 T 14-10-2018 Tlie_0773 4364bfbeb96437e24e04e4e1fe5f5b03 498 Pfam PF02436 Conserved carboxylase domain 326 477 1.4E-52 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Tlie_0773 4364bfbeb96437e24e04e4e1fe5f5b03 498 SUPERFAMILY SSF51569 35 312 5.68E-88 T 14-10-2018 Tlie_0773 4364bfbeb96437e24e04e4e1fe5f5b03 498 Pfam PF00682 HMGL-like 39 302 7.9E-49 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Tlie_0773 4364bfbeb96437e24e04e4e1fe5f5b03 498 Gene3D G3DSA:3.20.20.70 1 483 1.7E-169 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0008 319f69295c69dd6ed679f91b0c432953 463 Pfam PF03606 C4-dicarboxylate anaerobic carrier 9 458 9.7E-103 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 Tlie_1308 4c943b1af64191cae9f968ef86c338ad 123 PIRSF PIRSF006113 2 121 8.4E-33 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Tlie_1308 4c943b1af64191cae9f968ef86c338ad 123 SUPERFAMILY SSF55620 3 119 1.89E-36 T 14-10-2018 Tlie_1308 4c943b1af64191cae9f968ef86c338ad 123 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 6 93 2.7E-30 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Tlie_1308 4c943b1af64191cae9f968ef86c338ad 123 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 119 5.6E-35 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Tlie_1308 4c943b1af64191cae9f968ef86c338ad 123 Gene3D G3DSA:3.30.479.10 3 120 9.9E-40 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 Tlie_0391 1f1159ecfb951d6f317277951d596d31 170 SUPERFAMILY SSF52317 1 168 1.57E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_0391 1f1159ecfb951d6f317277951d596d31 170 Pfam PF01965 DJ-1/PfpI family 4 166 1.1E-41 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Tlie_0391 1f1159ecfb951d6f317277951d596d31 170 Gene3D G3DSA:3.40.50.880 1 170 3.4E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_0391 1f1159ecfb951d6f317277951d596d31 170 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 168 2.7E-43 T 14-10-2018 IPR006286 Deglycase PfpI Tlie_0062 c006533b61c05d36a3e8ffae0a490880 158 SUPERFAMILY SSF54523 6 93 8.63E-12 T 14-10-2018 Tlie_0062 c006533b61c05d36a3e8ffae0a490880 158 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 26 5.0E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0062 c006533b61c05d36a3e8ffae0a490880 158 PRINTS PR00813 Bacterial general secretion pathway protein G signature 41 59 3.4E-8 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tlie_0062 c006533b61c05d36a3e8ffae0a490880 158 PRINTS PR00813 Bacterial general secretion pathway protein G signature 5 30 3.4E-8 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tlie_0062 c006533b61c05d36a3e8ffae0a490880 158 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0062 c006533b61c05d36a3e8ffae0a490880 158 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 4.6E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0062 c006533b61c05d36a3e8ffae0a490880 158 Gene3D G3DSA:3.30.700.10 6 64 2.2E-12 T 14-10-2018 Tlie_1704 9711537dffd47bfc2e937546d608d1cd 363 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 179 196 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1704 9711537dffd47bfc2e937546d608d1cd 363 SUPERFAMILY SSF53067 117 347 8.19E-53 T 14-10-2018 Tlie_1704 9711537dffd47bfc2e937546d608d1cd 363 SUPERFAMILY SSF53067 3 173 1.42E-64 T 14-10-2018 Tlie_1704 9711537dffd47bfc2e937546d608d1cd 363 Gene3D G3DSA:3.30.420.40 137 331 1.2E-146 T 14-10-2018 Tlie_1704 9711537dffd47bfc2e937546d608d1cd 363 Pfam PF00871 Acetokinase family 5 341 2.2E-60 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1704 9711537dffd47bfc2e937546d608d1cd 363 PIRSF PIRSF036458 1 355 9.3E-152 T 14-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Tlie_1704 9711537dffd47bfc2e937546d608d1cd 363 Hamap MF_00542 Probable butyrate kinase [buk]. 1 363 153.172 T 14-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Tlie_1704 9711537dffd47bfc2e937546d608d1cd 363 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 4 352 1.8E-152 T 14-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Tlie_1704 9711537dffd47bfc2e937546d608d1cd 363 Gene3D G3DSA:3.30.420.40 5 354 1.2E-146 T 14-10-2018 Tlie_1704 9711537dffd47bfc2e937546d608d1cd 363 PRINTS PR00471 Acetate kinase family signature 296 312 2.0E-14 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1704 9711537dffd47bfc2e937546d608d1cd 363 PRINTS PR00471 Acetate kinase family signature 179 200 2.0E-14 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1704 9711537dffd47bfc2e937546d608d1cd 363 PRINTS PR00471 Acetate kinase family signature 5 16 2.0E-14 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_1704 9711537dffd47bfc2e937546d608d1cd 363 PRINTS PR00471 Acetate kinase family signature 273 286 2.0E-14 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tlie_0146 414d028d4f4953a540771045351fd171 216 SMART SM00855 3 157 5.7E-22 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tlie_0146 414d028d4f4953a540771045351fd171 216 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 191 3.4E-61 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tlie_0146 414d028d4f4953a540771045351fd171 216 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 4 182 1.2E-51 T 14-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Tlie_0146 414d028d4f4953a540771045351fd171 216 PIRSF PIRSF000709 3 192 1.4E-18 T 14-10-2018 Tlie_0146 414d028d4f4953a540771045351fd171 216 SUPERFAMILY SSF53254 1 192 9.69E-62 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Tlie_0146 414d028d4f4953a540771045351fd171 216 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Tlie_0146 414d028d4f4953a540771045351fd171 216 Gene3D G3DSA:3.40.50.1240 1 202 3.4E-68 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Tlie_0982 27cbaada25a565fd84d0f80d91a4d498 444 Gene3D G3DSA:3.30.1490.110 85 170 7.7E-68 T 14-10-2018 Tlie_0982 27cbaada25a565fd84d0f80d91a4d498 444 Hamap MF_02033 Cell division protein FtsA [ftsA]. 7 444 18.883 T 14-10-2018 IPR020823 Cell division protein FtsA Tlie_0982 27cbaada25a565fd84d0f80d91a4d498 444 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 11 378 1.3E-56 T 14-10-2018 IPR020823 Cell division protein FtsA Tlie_0982 27cbaada25a565fd84d0f80d91a4d498 444 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.3E-9 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Tlie_0982 27cbaada25a565fd84d0f80d91a4d498 444 SUPERFAMILY SSF53067 9 189 2.52E-29 T 14-10-2018 Tlie_0982 27cbaada25a565fd84d0f80d91a4d498 444 Gene3D G3DSA:3.30.420.40 198 354 7.7E-68 T 14-10-2018 Tlie_0982 27cbaada25a565fd84d0f80d91a4d498 444 Pfam PF14450 Cell division protein FtsA 209 372 4.4E-14 T 14-10-2018 Tlie_0982 27cbaada25a565fd84d0f80d91a4d498 444 Gene3D G3DSA:3.30.420.40 14 361 7.7E-68 T 14-10-2018 Tlie_0982 27cbaada25a565fd84d0f80d91a4d498 444 PIRSF PIRSF003101 2 444 3.1E-70 T 14-10-2018 IPR020823 Cell division protein FtsA Tlie_0982 27cbaada25a565fd84d0f80d91a4d498 444 SMART SM00842 11 191 1.0E-27 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Tlie_0982 27cbaada25a565fd84d0f80d91a4d498 444 Gene3D G3DSA:3.90.640.10 235 297 7.7E-68 T 14-10-2018 Tlie_0982 27cbaada25a565fd84d0f80d91a4d498 444 SUPERFAMILY SSF53067 204 362 2.27E-22 T 14-10-2018 Tlie_1285 1ce8cc40e1c16c14840a28cc3537f160 383 SUPERFAMILY SSF53659 26 235 6.72E-20 T 14-10-2018 Tlie_1285 1ce8cc40e1c16c14840a28cc3537f160 383 Pfam PF02504 Fatty acid synthesis protein 26 363 3.2E-41 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Tlie_1285 1ce8cc40e1c16c14840a28cc3537f160 383 Gene3D G3DSA:3.40.718.10 111 235 1.1E-14 T 14-10-2018 Tlie_1285 1ce8cc40e1c16c14840a28cc3537f160 383 PIRSF PIRSF036593 2 383 1.6E-141 T 14-10-2018 IPR012116 Glycine/sarcosine/betaine reductase complex, protein C, alpha subunit Tlie_0347 9603a46ecb5c521753d8e37a32f1d4d4 163 PIRSF PIRSF031501 9 162 1.9E-34 T 14-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 Tlie_0347 9603a46ecb5c521753d8e37a32f1d4d4 163 Pfam PF06177 QueT transporter 18 158 1.6E-45 T 14-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 Tlie_1382 64e34e08852efc63097a41763e49814f 428 Pfam PF01116 Fructose-bisphosphate aldolase class-II 42 342 7.0E-36 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Tlie_1382 64e34e08852efc63097a41763e49814f 428 Gene3D G3DSA:3.20.20.70 34 382 1.2E-47 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1382 64e34e08852efc63097a41763e49814f 428 SUPERFAMILY SSF51569 40 299 1.3E-36 T 14-10-2018 Tlie_0314 763bc926f73f26b83405237d79fe9b99 183 SUPERFAMILY SSF140478 25 173 2.35E-57 T 14-10-2018 IPR023353 LemA-like domain superfamily Tlie_0314 763bc926f73f26b83405237d79fe9b99 183 Gene3D G3DSA:1.20.1440.20 16 183 5.4E-67 T 14-10-2018 IPR023353 LemA-like domain superfamily Tlie_0314 763bc926f73f26b83405237d79fe9b99 183 Pfam PF04011 LemA family 8 183 1.8E-70 T 14-10-2018 IPR007156 LemA Tlie_1355 5e6808177ffc9d13951bafda1a78a99f 480 Gene3D G3DSA:3.50.50.60 119 427 1.2E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1355 5e6808177ffc9d13951bafda1a78a99f 480 SUPERFAMILY SSF51905 4 344 1.89E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1355 5e6808177ffc9d13951bafda1a78a99f 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.5E-21 T 14-10-2018 Tlie_1355 5e6808177ffc9d13951bafda1a78a99f 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 289 311 3.5E-21 T 14-10-2018 Tlie_1355 5e6808177ffc9d13951bafda1a78a99f 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 184 202 3.5E-21 T 14-10-2018 Tlie_1355 5e6808177ffc9d13951bafda1a78a99f 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 3.5E-21 T 14-10-2018 Tlie_1355 5e6808177ffc9d13951bafda1a78a99f 480 Gene3D G3DSA:3.50.50.60 10 367 1.2E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tlie_1355 5e6808177ffc9d13951bafda1a78a99f 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 7.6E-18 T 14-10-2018 Tlie_1355 5e6808177ffc9d13951bafda1a78a99f 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 435 7.6E-18 T 14-10-2018 Tlie_1355 5e6808177ffc9d13951bafda1a78a99f 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 184 209 7.6E-18 T 14-10-2018 Tlie_1355 5e6808177ffc9d13951bafda1a78a99f 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 304 311 7.6E-18 T 14-10-2018 Tlie_1355 5e6808177ffc9d13951bafda1a78a99f 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 7.6E-18 T 14-10-2018 Tlie_1355 5e6808177ffc9d13951bafda1a78a99f 480 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 311 2.3E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tlie_1355 5e6808177ffc9d13951bafda1a78a99f 480 SUPERFAMILY SSF55424 357 470 4.12E-10 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Tlie_1708 a3558363ff3e143d761e6d1c355b0749 317 Pfam PF16868 NMT1-like family 30 314 8.3E-86 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Tlie_1708 a3558363ff3e143d761e6d1c355b0749 317 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 5 314 1.3E-99 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Tlie_1708 a3558363ff3e143d761e6d1c355b0749 317 SUPERFAMILY SSF53850 26 316 4.61E-77 T 14-10-2018 Tlie_1708 a3558363ff3e143d761e6d1c355b0749 317 Gene3D G3DSA:3.40.190.10 114 251 8.3E-102 T 14-10-2018 Tlie_1708 a3558363ff3e143d761e6d1c355b0749 317 Gene3D G3DSA:3.40.190.10 30 314 8.3E-102 T 14-10-2018 Tlie_1384 9935d158cdf3bd92cb54e2174e4b2bad 136 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 116 27.49 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Tlie_1384 9935d158cdf3bd92cb54e2174e4b2bad 136 Pfam PF02675 S-adenosylmethionine decarboxylase 7 112 1.2E-33 T 14-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Tlie_1384 9935d158cdf3bd92cb54e2174e4b2bad 136 Gene3D G3DSA:3.30.160.750 62 124 7.8E-21 T 14-10-2018 Tlie_1384 9935d158cdf3bd92cb54e2174e4b2bad 136 SUPERFAMILY SSF56276 5 114 5.1E-34 T 14-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 Tlie_1384 9935d158cdf3bd92cb54e2174e4b2bad 136 Gene3D G3DSA:3.30.360.110 1 61 1.6E-17 T 14-10-2018 Tlie_1384 9935d158cdf3bd92cb54e2174e4b2bad 136 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 5 112 7.0E-38 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Tlie_0409 f794a39653a360c9eae62e874e111a9c 178 Pfam PF12822 ECF transporter, substrate-specific component 4 158 9.8E-13 T 14-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 Tlie_0409 f794a39653a360c9eae62e874e111a9c 178 Gene3D G3DSA:1.10.1760.20 2 170 5.5E-15 T 14-10-2018 Tlie_0140 38702738f7acc59d8aedb4855d9cd228 432 ProSitePatterns PS00450 Aconitase family signature 1. 290 306 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Tlie_0140 38702738f7acc59d8aedb4855d9cd228 432 ProSitePatterns PS01244 Aconitase family signature 2. 350 363 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Tlie_0140 38702738f7acc59d8aedb4855d9cd228 432 Gene3D G3DSA:3.30.499.20 4 268 9.6E-93 T 14-10-2018 Tlie_0140 38702738f7acc59d8aedb4855d9cd228 432 Pfam PF00330 Aconitase family (aconitate hydratase) 17 409 1.6E-92 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_0140 38702738f7acc59d8aedb4855d9cd228 432 Gene3D G3DSA:3.30.499.10 271 432 1.8E-57 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Tlie_0140 38702738f7acc59d8aedb4855d9cd228 432 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 417 47.364 T 14-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Tlie_0140 38702738f7acc59d8aedb4855d9cd228 432 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 4 416 1.9E-158 T 14-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Tlie_0140 38702738f7acc59d8aedb4855d9cd228 432 PRINTS PR00415 Aconitase family signature 188 201 6.4E-18 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_0140 38702738f7acc59d8aedb4855d9cd228 432 PRINTS PR00415 Aconitase family signature 350 363 6.4E-18 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_0140 38702738f7acc59d8aedb4855d9cd228 432 PRINTS PR00415 Aconitase family signature 112 125 6.4E-18 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_0140 38702738f7acc59d8aedb4855d9cd228 432 PRINTS PR00415 Aconitase family signature 126 141 6.4E-18 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_0140 38702738f7acc59d8aedb4855d9cd228 432 PRINTS PR00415 Aconitase family signature 202 215 6.4E-18 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tlie_0140 38702738f7acc59d8aedb4855d9cd228 432 SUPERFAMILY SSF53732 10 417 4.71E-136 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Tlie_0140 38702738f7acc59d8aedb4855d9cd228 432 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 415 3.6E-168 T 14-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 Tlie_1001 f8240165a5c2f70688acdb36a5c68dc9 212 SUPERFAMILY SSF52374 12 209 8.3E-50 T 14-10-2018 Tlie_1001 f8240165a5c2f70688acdb36a5c68dc9 212 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 16 207 1.8E-52 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Tlie_1001 f8240165a5c2f70688acdb36a5c68dc9 212 Gene3D G3DSA:3.40.50.620 10 211 4.5E-60 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1001 f8240165a5c2f70688acdb36a5c68dc9 212 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 14 77 1.5E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Tlie_1001 f8240165a5c2f70688acdb36a5c68dc9 212 Pfam PF01467 Cytidylyltransferase-like 16 182 4.6E-27 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Tlie_1001 f8240165a5c2f70688acdb36a5c68dc9 212 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 12 208 29.686 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Tlie_0398 c8fef20d61079e4781d72519077c7d8b 284 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 11 283 8.0E-95 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Tlie_0398 c8fef20d61079e4781d72519077c7d8b 284 Pfam PF05681 Fumarate hydratase (Fumerase) 13 282 2.0E-109 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Tlie_1306 6ed6b0543bd7f699b846549b10f2054c 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 284 9.6E-46 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Tlie_1306 6ed6b0543bd7f699b846549b10f2054c 321 SUPERFAMILY SSF52283 32 121 1.27E-24 T 14-10-2018 Tlie_1306 6ed6b0543bd7f699b846549b10f2054c 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 30 313 4.1E-22 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Tlie_1306 6ed6b0543bd7f699b846549b10f2054c 321 Gene3D G3DSA:3.40.50.720 99 282 2.2E-77 T 14-10-2018 Tlie_1306 6ed6b0543bd7f699b846549b10f2054c 321 SUPERFAMILY SSF51735 103 285 5.57E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1306 6ed6b0543bd7f699b846549b10f2054c 321 Gene3D G3DSA:3.40.50.720 28 307 2.2E-77 T 14-10-2018 Tlie_1753 db8241a262c3de40fc392c3e4d3ece70 534 Gene3D G3DSA:3.30.450.40 208 358 1.6E-25 T 14-10-2018 IPR029016 GAF-like domain superfamily Tlie_1753 db8241a262c3de40fc392c3e4d3ece70 534 Gene3D G3DSA:3.30.450.40 26 191 1.2E-26 T 14-10-2018 IPR029016 GAF-like domain superfamily Tlie_1753 db8241a262c3de40fc392c3e4d3ece70 534 Pfam PF13185 GAF domain 51 185 2.4E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tlie_1753 db8241a262c3de40fc392c3e4d3ece70 534 Pfam PF13185 GAF domain 217 348 9.6E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tlie_1753 db8241a262c3de40fc392c3e4d3ece70 534 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 515 5.0E-45 T 14-10-2018 IPR000160 GGDEF domain Tlie_1753 db8241a262c3de40fc392c3e4d3ece70 534 SMART SM00267 352 520 1.4E-45 T 14-10-2018 IPR000160 GGDEF domain Tlie_1753 db8241a262c3de40fc392c3e4d3ece70 534 SMART SM00065 51 195 3.1E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tlie_1753 db8241a262c3de40fc392c3e4d3ece70 534 SMART SM00065 216 359 1.0E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tlie_1753 db8241a262c3de40fc392c3e4d3ece70 534 SUPERFAMILY SSF55781 189 346 1.35E-23 T 14-10-2018 Tlie_1753 db8241a262c3de40fc392c3e4d3ece70 534 SUPERFAMILY SSF55781 32 186 1.31E-28 T 14-10-2018 Tlie_1753 db8241a262c3de40fc392c3e4d3ece70 534 Gene3D G3DSA:3.30.70.270 359 523 3.2E-53 T 14-10-2018 Tlie_1753 db8241a262c3de40fc392c3e4d3ece70 534 SUPERFAMILY SSF55073 367 516 3.45E-45 T 14-10-2018 IPR029787 Nucleotide cyclase Tlie_1753 db8241a262c3de40fc392c3e4d3ece70 534 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 360 517 2.2E-45 T 14-10-2018 IPR000160 GGDEF domain Tlie_0780 c1e5c4d319037785e7a59aa022036830 306 SUPERFAMILY SSF52540 6 186 2.07E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0780 c1e5c4d319037785e7a59aa022036830 306 Hamap MF_00367 GTPase Era [era]. 6 305 34.174 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0780 c1e5c4d319037785e7a59aa022036830 306 SUPERFAMILY SSF54814 187 305 7.19E-39 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Tlie_0780 c1e5c4d319037785e7a59aa022036830 306 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 8.4E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_0780 c1e5c4d319037785e7a59aa022036830 306 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 79 97 8.4E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_0780 c1e5c4d319037785e7a59aa022036830 306 Pfam PF01926 50S ribosome-binding GTPase 11 128 7.7E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tlie_0780 c1e5c4d319037785e7a59aa022036830 306 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 288 3.3E-78 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0780 c1e5c4d319037785e7a59aa022036830 306 Pfam PF07650 KH domain 213 294 1.6E-19 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0780 c1e5c4d319037785e7a59aa022036830 306 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 172 6.9E-26 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tlie_0780 c1e5c4d319037785e7a59aa022036830 306 Gene3D G3DSA:3.40.50.300 3 190 2.5E-45 T 14-10-2018 Tlie_0780 c1e5c4d319037785e7a59aa022036830 306 Gene3D G3DSA:3.30.300.20 191 306 1.1E-43 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Tlie_0473 4fe088566da069631d91f7f461e7e3f2 172 PIRSF PIRSF019239 1 172 3.3E-37 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Tlie_0473 4fe088566da069631d91f7f461e7e3f2 172 Pfam PF01899 Na+/H+ ion antiporter subunit 11 169 1.2E-40 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Tlie_1469 3fd9d7f057d6b71b2872b4d90ab112b4 304 Gene3D G3DSA:3.30.1490.20 103 170 1.7E-29 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tlie_1469 3fd9d7f057d6b71b2872b4d90ab112b4 304 Gene3D G3DSA:3.40.50.20 4 101 5.7E-28 T 14-10-2018 Tlie_1469 3fd9d7f057d6b71b2872b4d90ab112b4 304 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 7 273 2.4E-76 T 14-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 Tlie_1469 3fd9d7f057d6b71b2872b4d90ab112b4 304 TIGRFAM TIGR02144 LysX_arch: lysine biosynthesis enzyme LysX 7 275 1.7E-92 T 14-10-2018 IPR011870 Lysine biosynthesis enzyme LysX GO:0003824|GO:0005524|GO:0009085 Tlie_1469 3fd9d7f057d6b71b2872b4d90ab112b4 304 Pfam PF08443 RimK-like ATP-grasp domain 87 272 4.7E-26 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 Tlie_1469 3fd9d7f057d6b71b2872b4d90ab112b4 304 SUPERFAMILY SSF52440 5 87 2.47E-17 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tlie_1469 3fd9d7f057d6b71b2872b4d90ab112b4 304 SUPERFAMILY SSF56059 88 276 1.48E-40 T 14-10-2018 Tlie_1469 3fd9d7f057d6b71b2872b4d90ab112b4 304 Gene3D G3DSA:3.30.470.80 171 278 1.4E-31 T 14-10-2018 Tlie_1325 88ccf844e6730045b54fb0add48011a9 93 Gene3D G3DSA:3.30.70.60 1 93 2.9E-32 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Tlie_1325 88ccf844e6730045b54fb0add48011a9 93 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 93 19.873 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tlie_1325 88ccf844e6730045b54fb0add48011a9 93 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 91 5.2E-26 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1325 88ccf844e6730045b54fb0add48011a9 93 Pfam PF01250 Ribosomal protein S6 4 89 6.3E-28 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1325 88ccf844e6730045b54fb0add48011a9 93 SUPERFAMILY SSF54995 2 92 2.88E-29 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1212 48075246d6742dccf69137eb3ab89608 165 Pfam PF01899 Na+/H+ ion antiporter subunit 4 163 3.1E-38 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Tlie_1212 48075246d6742dccf69137eb3ab89608 165 PIRSF PIRSF019239 1 156 5.5E-37 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Tlie_0775 789303330a2eb36a37c554980bb6f7b1 319 SUPERFAMILY SSF52540 12 280 3.93E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0775 789303330a2eb36a37c554980bb6f7b1 319 Gene3D G3DSA:3.40.50.300 108 314 8.4E-77 T 14-10-2018 Tlie_0775 789303330a2eb36a37c554980bb6f7b1 319 Pfam PF02562 PhoH-like protein 111 314 7.7E-95 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 Tlie_0916 0d437b1e5315a85f23e508e9e5f9bfb9 102 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 1 95 20.786 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Tlie_0916 0d437b1e5315a85f23e508e9e5f9bfb9 102 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 101 4.4E-25 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Tlie_0916 0d437b1e5315a85f23e508e9e5f9bfb9 102 PIRSF PIRSF004555 1 102 5.0E-36 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Tlie_0916 0d437b1e5315a85f23e508e9e5f9bfb9 102 SUPERFAMILY SSF82607 7 101 1.7E-30 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Tlie_0916 0d437b1e5315a85f23e508e9e5f9bfb9 102 Pfam PF02575 YbaB/EbfC DNA-binding family 7 96 9.1E-32 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Tlie_0916 0d437b1e5315a85f23e508e9e5f9bfb9 102 Gene3D G3DSA:3.30.1310.10 3 102 3.0E-34 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Tlie_0934 bbffba16972887ea736c7322b289b040 121 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 84 108 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Tlie_0934 bbffba16972887ea736c7322b289b040 121 SUPERFAMILY SSF109635 4 76 3.4E-5 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily Tlie_0934 bbffba16972887ea736c7322b289b040 121 SUPERFAMILY SSF57716 81 114 7.56E-9 T 14-10-2018 Tlie_0934 bbffba16972887ea736c7322b289b040 121 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 81 113 5.0E-12 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Tlie_0934 bbffba16972887ea736c7322b289b040 121 Gene3D G3DSA:1.20.120.910 1 120 1.1E-23 T 14-10-2018 Tlie_0265 2eef916c0b5e1505721b3335194bbea4 739 SUPERFAMILY SSF52540 230 541 8.61E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0265 2eef916c0b5e1505721b3335194bbea4 739 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 233 565 3.5E-44 T 14-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core Tlie_0265 2eef916c0b5e1505721b3335194bbea4 739 Gene3D G3DSA:3.40.50.300 418 565 2.9E-12 T 14-10-2018 Tlie_0265 2eef916c0b5e1505721b3335194bbea4 739 Pfam PF00271 Helicase conserved C-terminal domain 432 537 2.6E-5 T 14-10-2018 IPR001650 Helicase, C-terminal Tlie_0265 2eef916c0b5e1505721b3335194bbea4 739 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 19 179 9.8E-18 T 14-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain Tlie_0265 2eef916c0b5e1505721b3335194bbea4 739 Gene3D G3DSA:3.40.50.300 183 400 4.7E-12 T 14-10-2018 Tlie_0265 2eef916c0b5e1505721b3335194bbea4 739 SUPERFAMILY SSF109604 18 100 7.46E-6 T 14-10-2018 Tlie_0265 2eef916c0b5e1505721b3335194bbea4 739 Gene3D G3DSA:1.10.3210.30 10 182 2.9E-14 T 14-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily Tlie_0265 2eef916c0b5e1505721b3335194bbea4 739 Pfam PF04851 Type III restriction enzyme, res subunit 228 386 1.3E-7 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Tlie_0265 2eef916c0b5e1505721b3335194bbea4 739 Pfam PF01966 HD domain 21 104 2.3E-5 T 14-10-2018 IPR006674 HD domain Tlie_0216 b67c9a13dc3fa23d4108b030921231f1 74 Pfam PF07872 Protein of unknown function (DUF1659) 6 50 3.1E-14 T 14-10-2018 IPR012454 Protein of unknown function DUF1659 Tlie_1669 d52b91cbb1326f8fb619624c1ac8d7f6 417 Pfam PF01546 Peptidase family M20/M25/M40 95 415 1.8E-33 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tlie_1669 d52b91cbb1326f8fb619624c1ac8d7f6 417 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 20 409 7.0E-79 T 14-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase Tlie_1669 d52b91cbb1326f8fb619624c1ac8d7f6 417 Gene3D G3DSA:3.30.70.360 209 336 1.9E-75 T 14-10-2018 Tlie_1669 d52b91cbb1326f8fb619624c1ac8d7f6 417 SUPERFAMILY SSF53187 5 415 6.29E-61 T 14-10-2018 Tlie_1669 d52b91cbb1326f8fb619624c1ac8d7f6 417 Pfam PF07687 Peptidase dimerisation domain 206 316 1.2E-17 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Tlie_1669 d52b91cbb1326f8fb619624c1ac8d7f6 417 SUPERFAMILY SSF55031 211 317 9.27E-17 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tlie_1669 d52b91cbb1326f8fb619624c1ac8d7f6 417 Gene3D G3DSA:3.40.630.10 23 405 1.9E-75 T 14-10-2018 Tlie_0690 35a1d8bef862ba519a172e9aba6da356 148 Gene3D G3DSA:3.30.910.20 22 142 5.8E-23 T 14-10-2018 IPR024930 Skp domain superfamily Tlie_0690 35a1d8bef862ba519a172e9aba6da356 148 SMART SM00935 17 142 2.8E-19 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Tlie_0690 35a1d8bef862ba519a172e9aba6da356 148 SUPERFAMILY SSF111384 28 141 3.27E-17 T 14-10-2018 Tlie_0690 35a1d8bef862ba519a172e9aba6da356 148 Pfam PF03938 Outer membrane protein (OmpH-like) 76 141 1.3E-12 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Tlie_0690 35a1d8bef862ba519a172e9aba6da356 148 Pfam PF03938 Outer membrane protein (OmpH-like) 17 78 3.9E-7 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Tlie_1902 2dfedd07bef32d9998a22b948049575b 170 SUPERFAMILY SSF47240 3 130 1.17E-28 T 14-10-2018 IPR009078 Ferritin-like superfamily Tlie_1902 2dfedd07bef32d9998a22b948049575b 170 Gene3D G3DSA:2.20.28.10 131 169 1.5E-14 T 14-10-2018 Tlie_1902 2dfedd07bef32d9998a22b948049575b 170 Pfam PF02915 Rubrerythrin 7 122 9.5E-21 T 14-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Tlie_1902 2dfedd07bef32d9998a22b948049575b 170 SUPERFAMILY SSF57802 136 167 2.36E-9 T 14-10-2018 Tlie_1902 2dfedd07bef32d9998a22b948049575b 170 Gene3D G3DSA:1.20.1260.10 2 130 2.0E-36 T 14-10-2018 IPR012347 Ferritin-like Tlie_1668 bcab1a6b699cb7ce33f42fbd0238102a 109 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 36 106 9.0E-15 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D Tlie_1668 bcab1a6b699cb7ce33f42fbd0238102a 109 Gene3D G3DSA:1.10.10.1150 49 108 1.6E-6 T 14-10-2018 Tlie_1139 fbbb4ec1db6955e3f5985007d715546a 466 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 464 196.321 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Tlie_1139 fbbb4ec1db6955e3f5985007d715546a 466 Pfam PF12390 Selenocysteine synthase N terminal 9 46 1.0E-4 T 14-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Tlie_1139 fbbb4ec1db6955e3f5985007d715546a 466 Pfam PF03841 L-seryl-tRNA selenium transferase 83 446 9.9E-151 T 14-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Tlie_1139 fbbb4ec1db6955e3f5985007d715546a 466 Gene3D G3DSA:3.90.1150.110 11 450 3.0E-169 T 14-10-2018 Tlie_1139 fbbb4ec1db6955e3f5985007d715546a 466 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 9 459 3.5E-179 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Tlie_1139 fbbb4ec1db6955e3f5985007d715546a 466 Gene3D G3DSA:3.40.640.10 95 357 3.0E-169 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1139 fbbb4ec1db6955e3f5985007d715546a 466 SUPERFAMILY SSF53383 74 462 5.35E-53 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1835 35e5e2cd6628d99ea5a43c5267ddff0f 306 SUPERFAMILY SSF51569 11 289 1.61E-61 T 14-10-2018 Tlie_1835 35e5e2cd6628d99ea5a43c5267ddff0f 306 Gene3D G3DSA:3.20.20.70 12 299 9.4E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1835 35e5e2cd6628d99ea5a43c5267ddff0f 306 Pfam PF00682 HMGL-like 16 285 6.3E-43 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Tlie_1696 1596bbea98e76e1b8122f8741d0cceaa 473 SUPERFAMILY SSF53686 47 367 4.58E-50 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tlie_1696 1596bbea98e76e1b8122f8741d0cceaa 473 Gene3D G3DSA:3.40.50.1100 60 365 6.9E-37 T 14-10-2018 Tlie_1696 1596bbea98e76e1b8122f8741d0cceaa 473 Gene3D G3DSA:3.40.50.1100 98 206 6.9E-37 T 14-10-2018 Tlie_1696 1596bbea98e76e1b8122f8741d0cceaa 473 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 59 365 1.0E-44 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tlie_1132 8bf876b87329cc12d4a64ee1c7d8329a 330 Pfam PF00579 tRNA synthetases class I (W and Y) 4 282 4.8E-66 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_1132 8bf876b87329cc12d4a64ee1c7d8329a 330 Gene3D G3DSA:3.40.50.620 5 324 1.7E-121 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1132 8bf876b87329cc12d4a64ee1c7d8329a 330 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_1132 8bf876b87329cc12d4a64ee1c7d8329a 330 Gene3D G3DSA:1.10.240.10 189 295 1.7E-121 T 14-10-2018 Tlie_1132 8bf876b87329cc12d4a64ee1c7d8329a 330 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 327 3.7E-90 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Tlie_1132 8bf876b87329cc12d4a64ee1c7d8329a 330 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 328 35.469 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 Tlie_1132 8bf876b87329cc12d4a64ee1c7d8329a 330 SUPERFAMILY SSF52374 4 327 5.09E-89 T 14-10-2018 Tlie_1132 8bf876b87329cc12d4a64ee1c7d8329a 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 1.2E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Tlie_1132 8bf876b87329cc12d4a64ee1c7d8329a 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 144 165 1.2E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Tlie_1132 8bf876b87329cc12d4a64ee1c7d8329a 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 1.2E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Tlie_1132 8bf876b87329cc12d4a64ee1c7d8329a 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 194 204 1.2E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Tlie_0667 47ed9eef82edec2d3c12abc73f6ec5c8 214 Gene3D G3DSA:3.40.50.300 1 213 2.2E-86 T 14-10-2018 Tlie_0667 47ed9eef82edec2d3c12abc73f6ec5c8 214 Pfam PF00406 Adenylate kinase 6 190 3.5E-59 T 14-10-2018 Tlie_0667 47ed9eef82edec2d3c12abc73f6ec5c8 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tlie_0667 47ed9eef82edec2d3c12abc73f6ec5c8 214 Pfam PF05191 Adenylate kinase, active site lid 127 162 7.4E-18 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Tlie_0667 47ed9eef82edec2d3c12abc73f6ec5c8 214 Hamap MF_00235 Adenylate kinase [adk]. 1 213 52.112 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tlie_0667 47ed9eef82edec2d3c12abc73f6ec5c8 214 SUPERFAMILY SSF52540 1 213 4.6E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0667 47ed9eef82edec2d3c12abc73f6ec5c8 214 PRINTS PR00094 Adenylate kinase signature 177 191 4.0E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tlie_0667 47ed9eef82edec2d3c12abc73f6ec5c8 214 PRINTS PR00094 Adenylate kinase signature 81 97 4.0E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tlie_0667 47ed9eef82edec2d3c12abc73f6ec5c8 214 PRINTS PR00094 Adenylate kinase signature 160 175 4.0E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tlie_0667 47ed9eef82edec2d3c12abc73f6ec5c8 214 PRINTS PR00094 Adenylate kinase signature 4 17 4.0E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tlie_0667 47ed9eef82edec2d3c12abc73f6ec5c8 214 PRINTS PR00094 Adenylate kinase signature 32 46 4.0E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tlie_0667 47ed9eef82edec2d3c12abc73f6ec5c8 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 1.0E-83 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Tlie_0973 f8fd707a0ccd2af6576180001939d4c0 511 SUPERFAMILY SSF63418 17 108 2.22E-22 T 14-10-2018 IPR035911 MurE/MurF, N-terminal Tlie_0973 f8fd707a0ccd2af6576180001939d4c0 511 Pfam PF01225 Mur ligase family, catalytic domain 40 103 5.1E-10 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Tlie_0973 f8fd707a0ccd2af6576180001939d4c0 511 Pfam PF08245 Mur ligase middle domain 118 327 2.3E-49 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tlie_0973 f8fd707a0ccd2af6576180001939d4c0 511 Pfam PF02875 Mur ligase family, glutamate ligase domain 348 433 3.7E-21 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tlie_0973 f8fd707a0ccd2af6576180001939d4c0 511 SUPERFAMILY SSF53623 109 345 1.01E-64 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tlie_0973 f8fd707a0ccd2af6576180001939d4c0 511 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 116 139 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Tlie_0973 f8fd707a0ccd2af6576180001939d4c0 511 SUPERFAMILY SSF53244 348 501 1.21E-40 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tlie_0973 f8fd707a0ccd2af6576180001939d4c0 511 Gene3D G3DSA:3.90.190.20 356 509 4.5E-50 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tlie_0973 f8fd707a0ccd2af6576180001939d4c0 511 Gene3D G3DSA:3.40.1390.10 16 107 9.8E-23 T 14-10-2018 Tlie_0973 f8fd707a0ccd2af6576180001939d4c0 511 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 34 500 1.5E-144 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Tlie_0973 f8fd707a0ccd2af6576180001939d4c0 511 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 502 31.391 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Tlie_0973 f8fd707a0ccd2af6576180001939d4c0 511 Gene3D G3DSA:3.40.1190.10 109 352 4.2E-77 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tlie_0260 a43350378cb909b38d3241d2fe5766f2 262 Gene3D G3DSA:3.30.70.1890 9 121 3.3E-12 T 14-10-2018 Tlie_0260 a43350378cb909b38d3241d2fe5766f2 262 PIRSF PIRSF005054 1 250 7.4E-64 T 14-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Tlie_0260 a43350378cb909b38d3241d2fe5766f2 262 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 49 244 3.6E-34 T 14-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Tlie_0260 a43350378cb909b38d3241d2fe5766f2 262 Gene3D G3DSA:3.30.70.1900 125 249 2.1E-23 T 14-10-2018 Tlie_0260 a43350378cb909b38d3241d2fe5766f2 262 Pfam PF01881 CRISPR associated protein Cas6 97 245 5.2E-33 T 14-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Tlie_0501 e984fc99ba7057771ec4f88359879f71 347 Pfam PF01594 AI-2E family transporter 11 322 2.4E-54 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like Tlie_0710 a8bacb7cf71d4fa7472c8cb0c994b95c 128 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 14 89 2.0E-6 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Tlie_0710 a8bacb7cf71d4fa7472c8cb0c994b95c 128 Pfam PF00825 Ribonuclease P 10 113 1.9E-20 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Tlie_0710 a8bacb7cf71d4fa7472c8cb0c994b95c 128 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 8 117 14.118 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Tlie_0710 a8bacb7cf71d4fa7472c8cb0c994b95c 128 Gene3D G3DSA:3.30.230.10 8 122 1.3E-19 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tlie_0710 a8bacb7cf71d4fa7472c8cb0c994b95c 128 SUPERFAMILY SSF54211 9 118 8.34E-21 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_0710 a8bacb7cf71d4fa7472c8cb0c994b95c 128 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 11 114 1.6E-12 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Tlie_1200 8c8bbfcf9fd7111fdcf6ae95677e4752 329 Pfam PF00146 NADH dehydrogenase 12 322 1.6E-61 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_0126 2144c956d5685c6bd6dff5ad5f0639a2 181 SUPERFAMILY SSF47413 14 49 5.35E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tlie_0126 2144c956d5685c6bd6dff5ad5f0639a2 181 SMART SM00530 16 75 0.0026 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tlie_0126 2144c956d5685c6bd6dff5ad5f0639a2 181 Gene3D G3DSA:1.10.260.40 10 94 1.7E-10 T 14-10-2018 Tlie_0126 2144c956d5685c6bd6dff5ad5f0639a2 181 Pfam PF01381 Helix-turn-helix 17 48 8.0E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tlie_1414 958d0d057f53374f4eb885254f64707f 217 Pfam PF01464 Transglycosylase SLT domain 87 180 1.9E-11 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 Tlie_1414 958d0d057f53374f4eb885254f64707f 217 SUPERFAMILY SSF53955 64 196 4.15E-18 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Tlie_1414 958d0d057f53374f4eb885254f64707f 217 Gene3D G3DSA:1.10.530.10 68 213 1.9E-17 T 14-10-2018 Tlie_0042 c5e5699f9796ad3fb721aec5afb91e30 176 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 39 1.8E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0042 c5e5699f9796ad3fb721aec5afb91e30 176 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 39 1.3E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_0042 c5e5699f9796ad3fb721aec5afb91e30 176 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 18 38 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tlie_1595 d353f102c399c22d8905aad00b4303be 226 SUPERFAMILY SSF54862 152 220 1.21E-6 T 14-10-2018 Tlie_1595 d353f102c399c22d8905aad00b4303be 226 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 157 168 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_0784 d12f6806b956e82982e4d9365c493166 266 Pfam PF03618 Kinase/pyrophosphorylase 5 261 3.9E-100 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 Tlie_0784 d12f6806b956e82982e4d9365c493166 266 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 3 266 58.203 T 14-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein Tlie_1367 35a2eb70814adafaa83c0b10cb24d5b3 238 SUPERFAMILY SSF88713 13 226 2.67E-57 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Tlie_1367 35a2eb70814adafaa83c0b10cb24d5b3 238 Pfam PF04748 Divergent polysaccharide deacetylase 18 226 6.8E-67 T 14-10-2018 IPR006837 Divergent polysaccharide deacetylase Tlie_1367 35a2eb70814adafaa83c0b10cb24d5b3 238 Gene3D G3DSA:3.20.20.370 11 228 1.7E-67 T 14-10-2018 Tlie_0200 0b97c9cc5bb67e1a6e26e0708fef7d96 177 Gene3D G3DSA:3.40.50.10150 11 134 1.1E-27 T 14-10-2018 IPR010254 B12-dependent dehydratases, beta subunit Tlie_0200 0b97c9cc5bb67e1a6e26e0708fef7d96 177 SUPERFAMILY SSF52968 20 121 2.35E-19 T 14-10-2018 IPR010254 B12-dependent dehydratases, beta subunit Tlie_0200 0b97c9cc5bb67e1a6e26e0708fef7d96 177 Pfam PF02288 Dehydratase medium subunit 16 121 1.9E-25 T 14-10-2018 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor Tlie_1434 f9866a97c509469a10a0c30a2e3e0ad1 161 Pfam PF04073 Aminoacyl-tRNA editing domain 32 148 7.3E-31 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Tlie_1434 f9866a97c509469a10a0c30a2e3e0ad1 161 SUPERFAMILY SSF55826 12 158 3.66E-36 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Tlie_1434 f9866a97c509469a10a0c30a2e3e0ad1 161 Gene3D G3DSA:3.90.960.10 6 161 1.3E-43 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Tlie_0594 82edd7484487ca99ed651053c6700926 242 Gene3D G3DSA:3.40.50.300 5 242 1.9E-67 T 14-10-2018 Tlie_0594 82edd7484487ca99ed651053c6700926 242 SMART SM00382 30 217 7.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0594 82edd7484487ca99ed651053c6700926 242 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 6 241 8.4E-106 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 Tlie_0594 82edd7484487ca99ed651053c6700926 242 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0594 82edd7484487ca99ed651053c6700926 242 Pfam PF00005 ABC transporter 23 166 4.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0594 82edd7484487ca99ed651053c6700926 242 SUPERFAMILY SSF52540 5 236 8.62E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1318 51146a3ffabf64f04ddc2afb21cd09aa 703 Pfam PF00120 Glutamine synthetase, catalytic domain 194 349 2.3E-23 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tlie_1318 51146a3ffabf64f04ddc2afb21cd09aa 703 Pfam PF12437 Glutamine synthetase type III N terminal 8 170 8.5E-68 T 14-10-2018 IPR022147 Glutamine synthetase type III N-terminal GO:0004356 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tlie_1318 51146a3ffabf64f04ddc2afb21cd09aa 703 Gene3D G3DSA:1.20.120.1560 562 702 4.0E-20 T 14-10-2018 Tlie_1318 51146a3ffabf64f04ddc2afb21cd09aa 703 Gene3D G3DSA:3.30.590.10 180 400 1.3E-30 T 14-10-2018 Tlie_1318 51146a3ffabf64f04ddc2afb21cd09aa 703 SUPERFAMILY SSF55931 160 582 2.94E-66 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Tlie_1318 51146a3ffabf64f04ddc2afb21cd09aa 703 SMART SM01230 171 474 4.2E-39 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tlie_1318 51146a3ffabf64f04ddc2afb21cd09aa 703 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 316 331 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Tlie_0945 6e8644b5ef404c66fc1cb381c76354a5 262 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 22 93 6.1E-17 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Tlie_0945 6e8644b5ef404c66fc1cb381c76354a5 262 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 19 257 7.7E-62 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Tlie_0945 6e8644b5ef404c66fc1cb381c76354a5 262 Gene3D G3DSA:3.30.1330.30 8 92 4.4E-16 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Tlie_0945 6e8644b5ef404c66fc1cb381c76354a5 262 Gene3D G3DSA:3.40.1280.10 99 259 1.4E-45 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tlie_0945 6e8644b5ef404c66fc1cb381c76354a5 262 SUPERFAMILY SSF75217 107 258 2.09E-39 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Tlie_0945 6e8644b5ef404c66fc1cb381c76354a5 262 SUPERFAMILY SSF55315 16 93 2.19E-17 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Tlie_0945 6e8644b5ef404c66fc1cb381c76354a5 262 Pfam PF00588 SpoU rRNA Methylase family 114 253 3.3E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Tlie_0945 6e8644b5ef404c66fc1cb381c76354a5 262 SMART SM00967 20 96 5.1E-12 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Tlie_0050 a0429f711b7f554588707f5671f7cacf 363 Pfam PF04143 Sulphur transport 221 331 5.5E-11 T 14-10-2018 IPR007272 Sulphur transport domain Tlie_0050 a0429f711b7f554588707f5671f7cacf 363 TIGRFAM TIGR04112 seleno_YedE: putative selenium metabolism protein, YedE family 16 357 7.0E-150 T 14-10-2018 IPR026366 Putative selenium metabolism protein, YedE family Tlie_1467 ac24d7c3ebac996d3c9a0d205fe44cf7 161 SUPERFAMILY SSF52833 17 160 1.68E-44 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tlie_1467 ac24d7c3ebac996d3c9a0d205fe44cf7 161 PIRSF PIRSF000216 2 161 2.5E-49 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1467 ac24d7c3ebac996d3c9a0d205fe44cf7 161 Gene3D G3DSA:1.10.10.1590 11 77 7.2E-13 T 14-10-2018 Tlie_1467 ac24d7c3ebac996d3c9a0d205fe44cf7 161 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 19 160 2.9E-45 T 14-10-2018 Tlie_1467 ac24d7c3ebac996d3c9a0d205fe44cf7 161 Gene3D G3DSA:3.40.30.10 78 160 8.9E-26 T 14-10-2018 Tlie_1467 ac24d7c3ebac996d3c9a0d205fe44cf7 161 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 118 136 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1559 d33cc592a20717aaaa225c8b79ea111a 108 ProDom PD020942 TRANSPOSASE C TN554 TRANSPOSON TRANSPOSITION FOR DNA-BINDING TRANSPOSABLE DNA ELEMENT 8 104 9.0E-5 T 14-10-2018 Tlie_1852 818f700ced90963a52aa63933a2589af 490 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 39 489 1.4E-152 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 Tlie_1852 818f700ced90963a52aa63933a2589af 490 Pfam PF03553 Na+/H+ antiporter family 190 483 3.9E-59 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Tlie_0952 ed4f96e20ab109135e6ee887c2711f52 168 SUPERFAMILY SSF54862 36 105 1.61E-12 T 14-10-2018 Tlie_0952 ed4f96e20ab109135e6ee887c2711f52 168 Gene3D G3DSA:3.30.70.20 36 111 2.9E-9 T 14-10-2018 Tlie_0952 ed4f96e20ab109135e6ee887c2711f52 168 Pfam PF13237 4Fe-4S dicluster domain 44 86 3.7E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_0952 ed4f96e20ab109135e6ee887c2711f52 168 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_0684 96e6c3fd9c83b0c75f837a64f75f28db 392 Pfam PF11283 Protein of unknown function (DUF3084) 10 84 9.2E-29 T 14-10-2018 IPR021435 Protein of unknown function DUF3084 Tlie_0684 96e6c3fd9c83b0c75f837a64f75f28db 392 SUPERFAMILY SSF57997 82 192 3.27E-7 T 14-10-2018 Tlie_0684 96e6c3fd9c83b0c75f837a64f75f28db 392 Gene3D G3DSA:1.20.5.340 81 173 4.2E-5 T 14-10-2018 Tlie_0660 6bf236516581780521de1568bcdae6ed 134 Gene3D G3DSA:3.30.1370.30 4 76 4.1E-29 T 14-10-2018 Tlie_0660 6bf236516581780521de1568bcdae6ed 134 ProSitePatterns PS00053 Ribosomal protein S8 signature. 104 121 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0660 6bf236516581780521de1568bcdae6ed 134 Gene3D G3DSA:3.30.1490.10 77 134 3.3E-27 T 14-10-2018 Tlie_0660 6bf236516581780521de1568bcdae6ed 134 Pfam PF00410 Ribosomal protein S8 5 134 6.0E-52 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0660 6bf236516581780521de1568bcdae6ed 134 SUPERFAMILY SSF56047 3 134 5.23E-47 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0660 6bf236516581780521de1568bcdae6ed 134 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 134 32.229 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0760 9305a487326856f4dd4e932d89e36047 401 Gene3D G3DSA:2.170.120.40 222 307 2.9E-13 T 14-10-2018 Tlie_0760 9305a487326856f4dd4e932d89e36047 401 Gene3D G3DSA:2.170.120.40 132 217 2.8E-9 T 14-10-2018 Tlie_0760 9305a487326856f4dd4e932d89e36047 401 Gene3D G3DSA:2.170.120.30 312 400 6.9E-8 T 14-10-2018 Tlie_0760 9305a487326856f4dd4e932d89e36047 401 Pfam PF07949 YbbR-like protein 225 304 1.8E-10 T 14-10-2018 IPR012505 YbbR-like Tlie_0760 9305a487326856f4dd4e932d89e36047 401 Pfam PF07949 YbbR-like protein 131 213 1.4E-11 T 14-10-2018 IPR012505 YbbR-like Tlie_0760 9305a487326856f4dd4e932d89e36047 401 Gene3D G3DSA:2.170.120.30 30 131 1.2E-16 T 14-10-2018 Tlie_0270 2265cc4a48c5eedd2d4ea2721cf636cb 382 TIGRFAM TIGR00277 HDIG: HDIG domain 225 315 8.7E-10 T 14-10-2018 IPR006675 HDIG domain Tlie_0270 2265cc4a48c5eedd2d4ea2721cf636cb 382 Pfam PF01966 HD domain 226 347 3.7E-21 T 14-10-2018 IPR006674 HD domain Tlie_0270 2265cc4a48c5eedd2d4ea2721cf636cb 382 Gene3D G3DSA:1.10.3210.10 162 377 1.7E-63 T 14-10-2018 Tlie_0270 2265cc4a48c5eedd2d4ea2721cf636cb 382 SUPERFAMILY SSF109604 211 377 1.43E-37 T 14-10-2018 Tlie_0270 2265cc4a48c5eedd2d4ea2721cf636cb 382 Pfam PF07694 5TMR of 5TMR-LYT 28 185 1.6E-22 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 Tlie_0270 2265cc4a48c5eedd2d4ea2721cf636cb 382 SMART SM00471 221 356 9.0E-11 T 14-10-2018 IPR003607 HD/PDEase domain Tlie_0855 67a0d4d25f3728d8f9f7c7eb94fc616f 360 Gene3D G3DSA:3.40.50.300 107 358 2.0E-98 T 14-10-2018 Tlie_0855 67a0d4d25f3728d8f9f7c7eb94fc616f 360 Pfam PF00437 Type II/IV secretion system protein 10 268 1.2E-44 T 14-10-2018 IPR001482 Type II/IV secretion system protein Tlie_0855 67a0d4d25f3728d8f9f7c7eb94fc616f 360 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 200 214 - T 14-10-2018 IPR001482 Type II/IV secretion system protein Tlie_0855 67a0d4d25f3728d8f9f7c7eb94fc616f 360 SUPERFAMILY SSF52540 3 341 1.37E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0855 67a0d4d25f3728d8f9f7c7eb94fc616f 360 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 5 350 1.2E-137 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Tlie_0855 67a0d4d25f3728d8f9f7c7eb94fc616f 360 SMART SM00382 129 254 5.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0855 67a0d4d25f3728d8f9f7c7eb94fc616f 360 Gene3D G3DSA:3.30.450.90 2 106 1.3E-29 T 14-10-2018 Tlie_1756 1be45f15b40826da54ca555119f35f5d 572 SUPERFAMILY SSF53323 12 225 6.41E-29 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tlie_1756 1be45f15b40826da54ca555119f35f5d 572 SUPERFAMILY SSF52518 204 455 6.2E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1756 1be45f15b40826da54ca555119f35f5d 572 Gene3D G3DSA:3.40.920.10 10 190 1.2E-22 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tlie_1756 1be45f15b40826da54ca555119f35f5d 572 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 12 567 7.9E-188 T 14-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 Tlie_1756 1be45f15b40826da54ca555119f35f5d 572 Gene3D G3DSA:3.40.50.920 462 572 5.3E-21 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_1756 1be45f15b40826da54ca555119f35f5d 572 SUPERFAMILY SSF52922 469 571 2.14E-9 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tlie_1756 1be45f15b40826da54ca555119f35f5d 572 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 216 449 2.3E-56 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Tlie_1756 1be45f15b40826da54ca555119f35f5d 572 Gene3D G3DSA:3.40.50.970 191 391 3.7E-69 T 14-10-2018 Tlie_1756 1be45f15b40826da54ca555119f35f5d 572 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 20 180 3.0E-27 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Tlie_1873 022eaa9d38c321bb78d9a6141e00027b 174 Gene3D G3DSA:3.30.428.10 1 172 2.8E-57 T 14-10-2018 IPR036265 HIT-like superfamily Tlie_1873 022eaa9d38c321bb78d9a6141e00027b 174 SUPERFAMILY SSF54197 11 169 6.34E-42 T 14-10-2018 IPR036265 HIT-like superfamily Tlie_1873 022eaa9d38c321bb78d9a6141e00027b 174 Pfam PF01230 HIT domain 48 136 9.5E-13 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Tlie_0894 a5b5508c7445841235a894678e510a1e 356 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 338 6.8E-43 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tlie_0527 0be64f91006cfd04f9e32e0d93a4286f 123 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 113 18.524 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 Tlie_0527 0be64f91006cfd04f9e32e0d93a4286f 123 Gene3D G3DSA:3.40.1350.10 10 117 2.6E-24 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Tlie_0527 0be64f91006cfd04f9e32e0d93a4286f 123 Pfam PF02021 Uncharacterised protein family UPF0102 11 100 1.0E-22 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 Tlie_0527 0be64f91006cfd04f9e32e0d93a4286f 123 SUPERFAMILY SSF52980 10 106 4.83E-19 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Tlie_1348 557f0885c7690a71eebcb2e1b9dfb659 295 Gene3D G3DSA:3.40.50.150 93 293 1.5E-53 T 14-10-2018 Tlie_1348 557f0885c7690a71eebcb2e1b9dfb659 295 SUPERFAMILY SSF53335 55 283 3.44E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_1348 557f0885c7690a71eebcb2e1b9dfb659 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 4 289 28.943 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Tlie_1348 557f0885c7690a71eebcb2e1b9dfb659 295 PIRSF PIRSF000401 14 291 2.2E-64 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Tlie_1348 557f0885c7690a71eebcb2e1b9dfb659 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 38 288 2.0E-61 T 14-10-2018 Tlie_0890 34d0f8f4902a09c28f588bd46e1b7f72 162 SUPERFAMILY SSF88946 20 82 1.96E-15 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tlie_0890 34d0f8f4902a09c28f588bd46e1b7f72 162 Gene3D G3DSA:1.10.10.10 34 162 1.7E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0890 34d0f8f4902a09c28f588bd46e1b7f72 162 Pfam PF04542 Sigma-70 region 2 20 82 2.6E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tlie_0890 34d0f8f4902a09c28f588bd46e1b7f72 162 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 161 8.8E-16 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tlie_0630 701236c5272149ce18ad7e69559da9d9 501 Pfam PF10150 Ribonuclease E/G family 111 379 1.8E-100 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Tlie_0630 701236c5272149ce18ad7e69559da9d9 501 SUPERFAMILY SSF50249 45 115 1.2E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0630 701236c5272149ce18ad7e69559da9d9 501 Gene3D G3DSA:3.40.1260.20 389 491 8.5E-6 T 14-10-2018 Tlie_0630 701236c5272149ce18ad7e69559da9d9 501 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 19 413 6.6E-133 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Tlie_0630 701236c5272149ce18ad7e69559da9d9 501 Gene3D G3DSA:2.40.50.140 38 115 4.8E-20 T 14-10-2018 Tlie_0630 701236c5272149ce18ad7e69559da9d9 501 SMART SM00316 43 109 5.1E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tlie_0659 4be6a4b0cad07bc1ba25ca31fc9ed762 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 23.521 T 14-10-2018 IPR023053 Ribosomal protein S14, type Z Tlie_0659 4be6a4b0cad07bc1ba25ca31fc9ed762 61 Gene3D G3DSA:4.10.830.10 1 61 2.0E-26 T 14-10-2018 Tlie_0659 4be6a4b0cad07bc1ba25ca31fc9ed762 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0659 4be6a4b0cad07bc1ba25ca31fc9ed762 61 Pfam PF00253 Ribosomal protein S14p/S29e 13 60 7.9E-23 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0659 4be6a4b0cad07bc1ba25ca31fc9ed762 61 SUPERFAMILY SSF57716 6 61 5.06E-19 T 14-10-2018 Tlie_1276 532c95d0104c522fc8be679f46129cf6 714 SUPERFAMILY SSF109604 523 694 1.32E-30 T 14-10-2018 Tlie_1276 532c95d0104c522fc8be679f46129cf6 714 SMART SM00471 526 661 9.9E-8 T 14-10-2018 IPR003607 HD/PDEase domain Tlie_1276 532c95d0104c522fc8be679f46129cf6 714 Gene3D G3DSA:3.30.450.40 343 509 4.3E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily Tlie_1276 532c95d0104c522fc8be679f46129cf6 714 SUPERFAMILY SSF55781 340 499 3.93E-13 T 14-10-2018 Tlie_1276 532c95d0104c522fc8be679f46129cf6 714 Pfam PF13487 HD domain 582 642 2.0E-16 T 14-10-2018 Tlie_1276 532c95d0104c522fc8be679f46129cf6 714 Gene3D G3DSA:1.10.3210.10 510 708 4.1E-64 T 14-10-2018 Tlie_1362 0d5e9e4f4ab8f13d2a864bfe3c6acd0c 228 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 10 217 6.5E-12 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain Tlie_1480 c39e5b06c11854283fa6425b70252a7b 421 Gene3D G3DSA:3.40.640.10 33 283 4.3E-176 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1480 c39e5b06c11854283fa6425b70252a7b 421 PIRSF PIRSF000412 1 410 3.7E-164 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tlie_1480 c39e5b06c11854283fa6425b70252a7b 421 SUPERFAMILY SSF53383 3 409 1.12E-169 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1480 c39e5b06c11854283fa6425b70252a7b 421 Pfam PF00464 Serine hydroxymethyltransferase 4 380 1.8E-161 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tlie_1480 c39e5b06c11854283fa6425b70252a7b 421 Gene3D G3DSA:3.90.1150.10 6 389 4.3E-176 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1480 c39e5b06c11854283fa6425b70252a7b 421 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 410 49.655 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tlie_0103 7dc5b8e40f3f3c6ae91058f0aa44f5dc 371 SUPERFAMILY SSF53822 84 359 6.12E-10 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Tlie_0103 7dc5b8e40f3f3c6ae91058f0aa44f5dc 371 Gene3D G3DSA:3.40.50.2300 104 324 3.7E-6 T 14-10-2018 Tlie_0103 7dc5b8e40f3f3c6ae91058f0aa44f5dc 371 Gene3D G3DSA:3.40.50.2300 142 264 3.7E-6 T 14-10-2018 Tlie_0985 6611be99a28fa724107ffd2dba3c1858 220 SUPERFAMILY SSF110997 145 216 3.79E-15 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Tlie_0985 6611be99a28fa724107ffd2dba3c1858 220 Gene3D G3DSA:3.30.70.1070 128 219 6.3E-17 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Tlie_0985 6611be99a28fa724107ffd2dba3c1858 220 Pfam PF05036 Sporulation related domain 145 215 2.2E-15 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 Tlie_1574 21cf633e537caaac41c146b695bdd6d0 786 Gene3D G3DSA:3.20.70.40 1 786 7.3E-298 T 14-10-2018 Tlie_1574 21cf633e537caaac41c146b695bdd6d0 786 Pfam PF02901 Pyruvate formate lyase-like 1 648 1.0E-233 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Tlie_1574 21cf633e537caaac41c146b695bdd6d0 786 SUPERFAMILY SSF51998 1 784 1.07E-243 T 14-10-2018 Tlie_1574 21cf633e537caaac41c146b695bdd6d0 786 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 1 783 4.6E-213 T 14-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Tlie_1574 21cf633e537caaac41c146b695bdd6d0 786 Pfam PF01228 Glycine radical 665 767 2.1E-35 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 Tlie_1288 d3e89bb6dd59ecf837ff1cdc2c296316 109 PIRSF PIRSF000181 1 109 3.6E-45 T 14-10-2018 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 Tlie_1288 d3e89bb6dd59ecf837ff1cdc2c296316 109 Pfam PF04723 Glycine reductase complex selenoprotein A 1 101 3.8E-50 T 14-10-2018 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 Tlie_0611 c1a0b8f96cd9efc0721ca0ccf4dff30a 118 Pfam PF02699 Preprotein translocase subunit 9 84 7.0E-28 T 14-10-2018 IPR003849 Preprotein translocase YajC Tlie_0611 c1a0b8f96cd9efc0721ca0ccf4dff30a 118 SMART SM01323 5 87 3.6E-39 T 14-10-2018 IPR003849 Preprotein translocase YajC Tlie_0611 c1a0b8f96cd9efc0721ca0ccf4dff30a 118 PRINTS PR01853 Bacterial YajC preprotein translocase signature 7 27 1.2E-14 T 14-10-2018 IPR003849 Preprotein translocase YajC Tlie_0611 c1a0b8f96cd9efc0721ca0ccf4dff30a 118 PRINTS PR01853 Bacterial YajC preprotein translocase signature 27 45 1.2E-14 T 14-10-2018 IPR003849 Preprotein translocase YajC Tlie_0611 c1a0b8f96cd9efc0721ca0ccf4dff30a 118 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 7 85 1.4E-28 T 14-10-2018 IPR003849 Preprotein translocase YajC Tlie_0500 311a20eac9a49f05a9555ca73e04c53d 391 Pfam PF00266 Aminotransferase class-V 14 348 1.6E-52 T 14-10-2018 IPR000192 Aminotransferase class V domain Tlie_0500 311a20eac9a49f05a9555ca73e04c53d 391 SUPERFAMILY SSF53383 10 374 3.74E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0500 311a20eac9a49f05a9555ca73e04c53d 391 PIRSF PIRSF000524 7 391 2.2E-129 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Tlie_0500 311a20eac9a49f05a9555ca73e04c53d 391 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 190 210 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Tlie_0500 311a20eac9a49f05a9555ca73e04c53d 391 Gene3D G3DSA:3.90.1150.10 10 370 5.9E-153 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_0500 311a20eac9a49f05a9555ca73e04c53d 391 Gene3D G3DSA:3.40.640.10 23 268 5.9E-153 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0170 19166254309eb1ef807585146209cde6 318 Gene3D G3DSA:3.40.190.10 31 312 3.2E-84 T 14-10-2018 Tlie_0170 19166254309eb1ef807585146209cde6 318 Pfam PF16868 NMT1-like family 31 312 8.4E-75 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Tlie_0170 19166254309eb1ef807585146209cde6 318 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 4 312 2.9E-79 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Tlie_0170 19166254309eb1ef807585146209cde6 318 Gene3D G3DSA:3.40.190.10 114 252 3.2E-84 T 14-10-2018 Tlie_0170 19166254309eb1ef807585146209cde6 318 SUPERFAMILY SSF53850 27 312 3.73E-64 T 14-10-2018 Tlie_1110 a4bcefea717b1cc92a6598cbee30ee12 403 Pfam PF05636 HIGH Nucleotidyl Transferase 6 388 2.0E-115 T 14-10-2018 IPR008513 Uncharacterised protein family UPF0348 Tlie_1110 a4bcefea717b1cc92a6598cbee30ee12 403 Hamap MF_01539 UPF0348 protein . 5 400 31.597 T 14-10-2018 IPR008513 Uncharacterised protein family UPF0348 Tlie_1110 a4bcefea717b1cc92a6598cbee30ee12 403 Gene3D G3DSA:3.40.50.620 1 242 3.6E-35 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1110 a4bcefea717b1cc92a6598cbee30ee12 403 SUPERFAMILY SSF52374 13 232 7.89E-16 T 14-10-2018 Tlie_0131 ef0ab5bba8013f6612a9df8b27676ac0 95 Pfam PF02599 Global regulator protein family 1 54 1.4E-21 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Tlie_0131 ef0ab5bba8013f6612a9df8b27676ac0 95 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 2.0E-4 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Tlie_0131 ef0ab5bba8013f6612a9df8b27676ac0 95 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 68 16.856 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Tlie_0131 ef0ab5bba8013f6612a9df8b27676ac0 95 SUPERFAMILY SSF117130 1 56 2.88E-15 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Tlie_0131 ef0ab5bba8013f6612a9df8b27676ac0 95 Gene3D G3DSA:3.30.70.1680 1 65 1.1E-20 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Tlie_0741 c4085343a0015fb5a4f0134c925130f2 317 Gene3D G3DSA:3.40.190.10 27 310 3.0E-109 T 14-10-2018 Tlie_0741 c4085343a0015fb5a4f0134c925130f2 317 Pfam PF16868 NMT1-like family 27 310 6.5E-102 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Tlie_0741 c4085343a0015fb5a4f0134c925130f2 317 SUPERFAMILY SSF53850 23 311 1.38E-79 T 14-10-2018 Tlie_0741 c4085343a0015fb5a4f0134c925130f2 317 Gene3D G3DSA:3.40.190.10 110 247 3.0E-109 T 14-10-2018 Tlie_0741 c4085343a0015fb5a4f0134c925130f2 317 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 2 310 3.4E-111 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Tlie_0071 8a9e49ec6dd3c71eae7a78d41083d389 387 Gene3D G3DSA:3.40.1690.10 242 385 9.5E-57 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Tlie_0071 8a9e49ec6dd3c71eae7a78d41083d389 387 SUPERFAMILY SSF160544 269 376 4.19E-42 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Tlie_0071 8a9e49ec6dd3c71eae7a78d41083d389 387 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 327 348 5.5E-38 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tlie_0071 8a9e49ec6dd3c71eae7a78d41083d389 387 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 253 270 5.5E-38 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tlie_0071 8a9e49ec6dd3c71eae7a78d41083d389 387 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 297 312 5.5E-38 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tlie_0071 8a9e49ec6dd3c71eae7a78d41083d389 387 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 233 251 5.5E-38 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tlie_0071 8a9e49ec6dd3c71eae7a78d41083d389 387 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 34 56 5.5E-38 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tlie_0071 8a9e49ec6dd3c71eae7a78d41083d389 387 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 31 378 7.3E-117 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 Tlie_0071 8a9e49ec6dd3c71eae7a78d41083d389 387 Pfam PF01312 FlhB HrpN YscU SpaS Family 31 372 5.5E-120 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tlie_1845 97f5b9a35b786fbfa43957e679c22f16 507 Pfam PF04715 Anthranilate synthase component I, N terminal region 35 179 4.6E-22 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tlie_1845 97f5b9a35b786fbfa43957e679c22f16 507 Gene3D G3DSA:3.60.120.10 2 505 3.2E-165 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Tlie_1845 97f5b9a35b786fbfa43957e679c22f16 507 SUPERFAMILY SSF56322 21 499 1.13E-140 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Tlie_1845 97f5b9a35b786fbfa43957e679c22f16 507 Pfam PF00425 chorismate binding enzyme 240 490 1.9E-97 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Tlie_1845 97f5b9a35b786fbfa43957e679c22f16 507 PRINTS PR00095 Anthranilate synthase component I signature 338 351 1.1E-21 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tlie_1845 97f5b9a35b786fbfa43957e679c22f16 507 PRINTS PR00095 Anthranilate synthase component I signature 432 446 1.1E-21 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tlie_1845 97f5b9a35b786fbfa43957e679c22f16 507 PRINTS PR00095 Anthranilate synthase component I signature 447 461 1.1E-21 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tlie_1845 97f5b9a35b786fbfa43957e679c22f16 507 PRINTS PR00095 Anthranilate synthase component I signature 352 365 1.1E-21 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tlie_1731 b90ca6c98810d57d8b51841077b33e7d 345 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 45 316 1.3E-81 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Tlie_1731 b90ca6c98810d57d8b51841077b33e7d 345 Gene3D G3DSA:3.40.190.170 24 344 3.5E-103 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Tlie_1731 b90ca6c98810d57d8b51841077b33e7d 345 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 47 266 6.5E-68 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Tlie_1731 b90ca6c98810d57d8b51841077b33e7d 345 PIRSF PIRSF006470 1 335 8.0E-88 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Tlie_1356 74f174df6089a87f423cd496ec7b0717 403 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 175 188 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tlie_1356 74f174df6089a87f423cd496ec7b0717 403 Gene3D G3DSA:3.20.20.20 116 403 9.0E-106 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tlie_1356 74f174df6089a87f423cd496ec7b0717 403 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 140 398 1.8E-96 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Tlie_1356 74f174df6089a87f423cd496ec7b0717 403 Pfam PF00809 Pterin binding enzyme 142 384 9.5E-82 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tlie_1356 74f174df6089a87f423cd496ec7b0717 403 SUPERFAMILY SSF51717 130 401 6.93E-97 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tlie_1693 ae3beb5326b2ca3ae39effd67a8ce265 336 Gene3D G3DSA:3.40.190.170 26 335 2.5E-73 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Tlie_1693 ae3beb5326b2ca3ae39effd67a8ce265 336 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 312 2.7E-46 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Tlie_1086 9c261cc436a76bffcebb015dcd76d3cc 259 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 7 255 9.7E-66 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Tlie_1086 9c261cc436a76bffcebb015dcd76d3cc 259 Pfam PF02405 Permease MlaE 43 251 7.5E-70 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Tlie_1672 5d6d30023f107ff65643792c1123f96d 516 SUPERFAMILY SSF56317 224 493 3.01E-59 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tlie_1672 5d6d30023f107ff65643792c1123f96d 516 Gene3D G3DSA:3.40.630.30 4 224 2.0E-53 T 14-10-2018 Tlie_1672 5d6d30023f107ff65643792c1123f96d 516 Pfam PF00583 Acetyltransferase (GNAT) family 36 138 5.9E-6 T 14-10-2018 IPR000182 GNAT domain Tlie_1672 5d6d30023f107ff65643792c1123f96d 516 Pfam PF00795 Carbon-nitrogen hydrolase 228 488 3.0E-34 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Tlie_1672 5d6d30023f107ff65643792c1123f96d 516 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 372 392 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site Tlie_1672 5d6d30023f107ff65643792c1123f96d 516 SUPERFAMILY SSF55729 13 141 3.49E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tlie_1672 5d6d30023f107ff65643792c1123f96d 516 Gene3D G3DSA:3.60.110.10 225 510 9.9E-58 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tlie_0148 b562fb426627a911bcd9b922db75ab98 194 SUPERFAMILY SSF52540 6 180 1.58E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0148 b562fb426627a911bcd9b922db75ab98 194 PIRSF PIRSF006135 5 182 5.2E-60 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Tlie_0148 b562fb426627a911bcd9b922db75ab98 194 Gene3D G3DSA:3.40.50.300 6 180 1.9E-62 T 14-10-2018 Tlie_0148 b562fb426627a911bcd9b922db75ab98 194 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 7 178 1.4E-60 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Tlie_1091 9964f2b9f8a133699d9a4c792aa8f886 199 SUPERFAMILY SSF53271 17 160 1.17E-32 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tlie_1091 9964f2b9f8a133699d9a4c792aa8f886 199 Gene3D G3DSA:3.40.50.2020 13 199 2.2E-49 T 14-10-2018 Tlie_1091 9964f2b9f8a133699d9a4c792aa8f886 199 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 199 23.209 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tlie_1091 9964f2b9f8a133699d9a4c792aa8f886 199 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 14 198 1.2E-59 T 14-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tlie_1091 9964f2b9f8a133699d9a4c792aa8f886 199 Pfam PF00156 Phosphoribosyl transferase domain 53 167 2.4E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tlie_1666 f921ad35a22a9eb3385c8a141213c460 148 Gene3D G3DSA:3.90.280.10 1 148 1.6E-56 T 14-10-2018 IPR036610 PEBP-like superfamily Tlie_1666 f921ad35a22a9eb3385c8a141213c460 148 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 20 146 1.5E-40 T 14-10-2018 IPR005247 YbhB/YbcL Tlie_1666 f921ad35a22a9eb3385c8a141213c460 148 Pfam PF01161 Phosphatidylethanolamine-binding protein 15 146 3.9E-41 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein Tlie_1666 f921ad35a22a9eb3385c8a141213c460 148 SUPERFAMILY SSF49777 3 148 1.7E-48 T 14-10-2018 IPR036610 PEBP-like superfamily Tlie_0892 dbc2d98658aac4520368c2156103966d 360 SUPERFAMILY SSF53822 177 285 1.57E-5 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Tlie_0892 dbc2d98658aac4520368c2156103966d 360 Gene3D G3DSA:3.40.50.2300 135 350 3.1E-140 T 14-10-2018 Tlie_0892 dbc2d98658aac4520368c2156103966d 360 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 33 323 8.8E-68 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 Tlie_0892 dbc2d98658aac4520368c2156103966d 360 Gene3D G3DSA:3.40.50.2300 35 288 3.1E-140 T 14-10-2018 Tlie_1213 a12b57d786583101b57e1207f4269695 142 SUPERFAMILY SSF50800 2 142 8.37E-18 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Tlie_1213 a12b57d786583101b57e1207f4269695 142 Gene3D G3DSA:2.40.33.20 2 142 5.8E-11 T 14-10-2018 Tlie_1861 e67180a57f4dd5d374a6708256ebc782 251 SMART SM01001 119 251 7.3E-35 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Tlie_1861 e67180a57f4dd5d374a6708256ebc782 251 SUPERFAMILY SSF52255 119 248 1.57E-28 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Tlie_1861 e67180a57f4dd5d374a6708256ebc782 251 Gene3D G3DSA:3.40.50.7700 120 251 9.1E-34 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Tlie_1861 e67180a57f4dd5d374a6708256ebc782 251 Pfam PF00731 AIR carboxylase 121 245 4.1E-16 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Tlie_1910 59a1d6280dad01a56a1be1c6d962ccfa 401 Pfam PF00202 Aminotransferase class-III 17 399 2.5E-126 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tlie_1910 59a1d6280dad01a56a1be1c6d962ccfa 401 Gene3D G3DSA:3.40.640.10 60 310 2.5E-148 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1910 59a1d6280dad01a56a1be1c6d962ccfa 401 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 225 262 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tlie_1910 59a1d6280dad01a56a1be1c6d962ccfa 401 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 6 400 1.6E-170 T 14-10-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Tlie_1910 59a1d6280dad01a56a1be1c6d962ccfa 401 PIRSF PIRSF000521 175 401 2.6E-35 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tlie_1910 59a1d6280dad01a56a1be1c6d962ccfa 401 PIRSF PIRSF000521 2 166 5.0E-9 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tlie_1910 59a1d6280dad01a56a1be1c6d962ccfa 401 Gene3D G3DSA:3.90.1150.10 14 392 2.5E-148 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1910 59a1d6280dad01a56a1be1c6d962ccfa 401 SUPERFAMILY SSF53383 4 400 5.03E-125 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0662 536c17fc429e42377ca0ae536ada4ef7 122 Gene3D G3DSA:3.30.420.100 5 122 1.4E-46 T 14-10-2018 Tlie_0662 536c17fc429e42377ca0ae536ada4ef7 122 SUPERFAMILY SSF53137 7 120 1.12E-56 T 14-10-2018 Tlie_0662 536c17fc429e42377ca0ae536ada4ef7 122 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 122 29.088 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0662 536c17fc429e42377ca0ae536ada4ef7 122 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 122 2.9E-48 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0662 536c17fc429e42377ca0ae536ada4ef7 122 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 122 1.2E-44 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1128 c0c1daf46a4d228ceb4ae587a2fd4228 231 Pfam PF02224 Cytidylate kinase 12 221 1.1E-73 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Tlie_1128 c0c1daf46a4d228ceb4ae587a2fd4228 231 Hamap MF_00238 Cytidylate kinase [cmk]. 10 224 31.297 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Tlie_1128 c0c1daf46a4d228ceb4ae587a2fd4228 231 Gene3D G3DSA:3.40.50.300 2 223 5.9E-79 T 14-10-2018 Tlie_1128 c0c1daf46a4d228ceb4ae587a2fd4228 231 TIGRFAM TIGR00017 cmk: cytidylate kinase 10 218 3.6E-71 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Tlie_1128 c0c1daf46a4d228ceb4ae587a2fd4228 231 SUPERFAMILY SSF52540 11 223 2.59E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0230 a57b941c07e1e7039cf15bcaa2157bfe 368 Gene3D G3DSA:3.40.50.10770 9 204 5.6E-47 T 14-10-2018 Tlie_0230 a57b941c07e1e7039cf15bcaa2157bfe 368 TIGRFAM TIGR02619 TIGR02619: putative CRISPR-associated protein, APE2256 family 63 201 7.3E-11 T 14-10-2018 IPR013442 CRISPR-associated protein APE2256 Tlie_0230 a57b941c07e1e7039cf15bcaa2157bfe 368 Pfam PF09651 CRISPR-associated protein (Cas_APE2256) 66 202 2.4E-33 T 14-10-2018 IPR013442 CRISPR-associated protein APE2256 Tlie_0230 a57b941c07e1e7039cf15bcaa2157bfe 368 Gene3D G3DSA:1.10.196.30 13 55 5.6E-47 T 14-10-2018 Tlie_1163 b60917630f9406e7831618774cd414e5 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 290 2.9E-39 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Tlie_1163 b60917630f9406e7831618774cd414e5 330 SUPERFAMILY SSF51735 106 291 3.07E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1163 b60917630f9406e7831618774cd414e5 330 Gene3D G3DSA:3.40.50.720 104 292 2.4E-62 T 14-10-2018 Tlie_1163 b60917630f9406e7831618774cd414e5 330 SUPERFAMILY SSF52283 5 127 5.78E-12 T 14-10-2018 Tlie_1163 b60917630f9406e7831618774cd414e5 330 Gene3D G3DSA:3.40.50.720 22 318 2.4E-62 T 14-10-2018 Tlie_1163 b60917630f9406e7831618774cd414e5 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 323 3.8E-9 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Tlie_0137 2e2119bcb0abd43f158667e83f40bb0a 560 Gene3D G3DSA:3.40.50.970 356 534 3.7E-125 T 14-10-2018 Tlie_0137 2e2119bcb0abd43f158667e83f40bb0a 560 SUPERFAMILY SSF52518 362 557 6.61E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_0137 2e2119bcb0abd43f158667e83f40bb0a 560 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 166 6.3E-57 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Tlie_0137 2e2119bcb0abd43f158667e83f40bb0a 560 Gene3D G3DSA:3.40.50.1220 193 355 3.7E-125 T 14-10-2018 Tlie_0137 2e2119bcb0abd43f158667e83f40bb0a 560 Gene3D G3DSA:3.40.50.970 1 172 2.9E-68 T 14-10-2018 Tlie_0137 2e2119bcb0abd43f158667e83f40bb0a 560 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 327 4.9E-47 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Tlie_0137 2e2119bcb0abd43f158667e83f40bb0a 560 SUPERFAMILY SSF52467 188 354 8.0E-55 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Tlie_0137 2e2119bcb0abd43f158667e83f40bb0a 560 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 386 533 1.6E-49 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tlie_0137 2e2119bcb0abd43f158667e83f40bb0a 560 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 555 8.8E-222 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Tlie_0137 2e2119bcb0abd43f158667e83f40bb0a 560 SUPERFAMILY SSF52518 1 178 2.75E-60 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_0547 ff37567c098302c1d8b776c8a22c1278 348 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 68 326 4.0E-84 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Tlie_0547 ff37567c098302c1d8b776c8a22c1278 348 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 143 4.0E-5 T 14-10-2018 IPR001451 Hexapeptide repeat Tlie_0547 ff37567c098302c1d8b776c8a22c1278 348 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 224 258 1.1E-7 T 14-10-2018 IPR001451 Hexapeptide repeat Tlie_0547 ff37567c098302c1d8b776c8a22c1278 348 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 3.7E-8 T 14-10-2018 IPR001451 Hexapeptide repeat Tlie_0547 ff37567c098302c1d8b776c8a22c1278 348 SUPERFAMILY SSF51161 71 316 1.4E-70 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Tlie_0547 ff37567c098302c1d8b776c8a22c1278 348 Gene3D G3DSA:2.160.10.10 100 310 4.1E-60 T 14-10-2018 Tlie_0547 ff37567c098302c1d8b776c8a22c1278 348 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Tlie_0079 b33c8c37130de1149de5bd6d235feea5 203 SUPERFAMILY SSF53955 79 199 9.27E-43 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Tlie_0079 b33c8c37130de1149de5bd6d235feea5 203 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 99 127 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Tlie_0079 b33c8c37130de1149de5bd6d235feea5 203 Gene3D G3DSA:1.10.530.10 34 202 1.3E-43 T 14-10-2018 Tlie_0079 b33c8c37130de1149de5bd6d235feea5 203 Pfam PF01464 Transglycosylase SLT domain 82 179 2.9E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 Tlie_1491 48d042a759ec1660335b8848a70b7af3 458 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 3 458 51.793 T 14-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1491 48d042a759ec1660335b8848a70b7af3 458 SUPERFAMILY SSF52540 82 355 1.54E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1491 48d042a759ec1660335b8848a70b7af3 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 349 7.1E-64 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_1491 48d042a759ec1660335b8848a70b7af3 458 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_1491 48d042a759ec1660335b8848a70b7af3 458 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 10 75 7.7E-7 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tlie_1491 48d042a759ec1660335b8848a70b7af3 458 Gene3D G3DSA:3.40.50.12240 2 457 4.8E-156 T 14-10-2018 Tlie_1491 48d042a759ec1660335b8848a70b7af3 458 SUPERFAMILY SSF47917 361 416 5.23E-6 T 14-10-2018 Tlie_0238 138945221c9d19cd72f3f1ca01b71cbd 388 Pfam PF03787 RAMP superfamily 17 276 1.7E-18 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein Tlie_0238 138945221c9d19cd72f3f1ca01b71cbd 388 TIGRFAM TIGR01899 cas_TM1807_csm5: CRISPR type III-A/MTUBE-associated RAMP protein Csm5 18 350 8.0E-31 T 14-10-2018 IPR010173 CRISPR-associated protein, TM1807 Tlie_1648 a30fb852cc2da19d9b62314dffe5985d 249 SUPERFAMILY SSF54862 5 69 1.34E-17 T 14-10-2018 Tlie_1648 a30fb852cc2da19d9b62314dffe5985d 249 Pfam PF00037 4Fe-4S binding domain 9 31 4.2E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_1648 a30fb852cc2da19d9b62314dffe5985d 249 Gene3D G3DSA:3.30.70.20 7 65 3.4E-12 T 14-10-2018 Tlie_0346 842eaf7f88820b9460859f9817f5d47c 540 SUPERFAMILY SSF53187 3 515 1.83E-29 T 14-10-2018 Tlie_0346 842eaf7f88820b9460859f9817f5d47c 540 Pfam PF01546 Peptidase family M20/M25/M40 83 464 7.8E-12 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tlie_0346 842eaf7f88820b9460859f9817f5d47c 540 PIRSF PIRSF010386 1 540 8.4E-159 T 14-10-2018 IPR012166 Uncharacterised protein family RocB Tlie_0346 842eaf7f88820b9460859f9817f5d47c 540 Gene3D G3DSA:3.40.630.10 3 227 2.8E-31 T 14-10-2018 Tlie_1258 a9db06732e2ab35c116cd02e56002bda 465 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 214 369 7.4E-20 T 14-10-2018 IPR004477 ComEC/Rec2-related protein Tlie_1258 a9db06732e2ab35c116cd02e56002bda 465 Pfam PF03772 Competence protein 206 435 2.6E-33 T 14-10-2018 IPR004477 ComEC/Rec2-related protein Tlie_0698 9cebd8a70923045ac587b0eed877703a 445 Gene3D G3DSA:1.20.1730.10 12 444 8.6E-45 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Tlie_0698 9cebd8a70923045ac587b0eed877703a 445 Pfam PF00474 Sodium:solute symporter family 22 377 1.0E-15 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Tlie_1079 440d59d719729128154272b1139e71c1 171 Pfam PF14385 Domain of unknown function (DUF4416) 5 160 4.2E-55 T 14-10-2018 IPR025529 Protein of unknown function DUF4416 Tlie_1443 1e67e11426fcaae2fa0247e3f154dbb0 610 Gene3D G3DSA:2.40.50.140 5 117 8.1E-33 T 14-10-2018 Tlie_1443 1e67e11426fcaae2fa0247e3f154dbb0 610 Pfam PF02938 GAD domain 321 414 7.2E-20 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Tlie_1443 1e67e11426fcaae2fa0247e3f154dbb0 610 SUPERFAMILY SSF50249 12 116 1.01E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_1443 1e67e11426fcaae2fa0247e3f154dbb0 610 SUPERFAMILY SSF55681 125 594 2.03E-111 T 14-10-2018 Tlie_1443 1e67e11426fcaae2fa0247e3f154dbb0 610 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 11 594 34.169 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Tlie_1443 1e67e11426fcaae2fa0247e3f154dbb0 610 Gene3D G3DSA:3.30.1360.30 285 429 1.1E-195 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Tlie_1443 1e67e11426fcaae2fa0247e3f154dbb0 610 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 11 592 1.4E-236 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Tlie_1443 1e67e11426fcaae2fa0247e3f154dbb0 610 Pfam PF00152 tRNA synthetases class II (D, K and N) 131 568 3.3E-110 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_1443 1e67e11426fcaae2fa0247e3f154dbb0 610 SUPERFAMILY SSF55261 303 429 3.11E-32 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Tlie_1443 1e67e11426fcaae2fa0247e3f154dbb0 610 PRINTS PR01042 Aspartyl-tRNA synthetase signature 203 215 4.8E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_1443 1e67e11426fcaae2fa0247e3f154dbb0 610 PRINTS PR01042 Aspartyl-tRNA synthetase signature 220 233 4.8E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_1443 1e67e11426fcaae2fa0247e3f154dbb0 610 PRINTS PR01042 Aspartyl-tRNA synthetase signature 484 500 4.8E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_1443 1e67e11426fcaae2fa0247e3f154dbb0 610 PRINTS PR01042 Aspartyl-tRNA synthetase signature 528 542 4.8E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tlie_1443 1e67e11426fcaae2fa0247e3f154dbb0 610 Gene3D G3DSA:3.30.930.10 129 591 1.1E-195 T 14-10-2018 Tlie_1443 1e67e11426fcaae2fa0247e3f154dbb0 610 Pfam PF01336 OB-fold nucleic acid binding domain 28 112 6.2E-16 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Tlie_1533 770c61ec515fe8c0428b17ff99ad7a70 422 Pfam PF13598 Domain of unknown function (DUF4139) 129 414 2.4E-35 T 14-10-2018 IPR037291 Domain of unknown function DUF4139 Tlie_0128 afb8a1a0153e1f09484096448a1dd89b 392 SUPERFAMILY SSF53098 178 330 1.03E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_0128 afb8a1a0153e1f09484096448a1dd89b 392 SUPERFAMILY SSF46689 20 121 6.27E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_1552 01b4ba9660084864d7573ed55dd28316 343 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 202 224 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Tlie_1552 01b4ba9660084864d7573ed55dd28316 343 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 149 5.4E-7 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Tlie_1552 01b4ba9660084864d7573ed55dd28316 343 SUPERFAMILY SSF55347 157 321 7.19E-51 T 14-10-2018 Tlie_1552 01b4ba9660084864d7573ed55dd28316 343 Pfam PF00742 Homoserine dehydrogenase 157 334 6.8E-61 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Tlie_1552 01b4ba9660084864d7573ed55dd28316 343 Gene3D G3DSA:3.40.50.720 4 325 1.6E-103 T 14-10-2018 Tlie_1552 01b4ba9660084864d7573ed55dd28316 343 PIRSF PIRSF036497 1 342 5.0E-102 T 14-10-2018 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Tlie_1552 01b4ba9660084864d7573ed55dd28316 343 Gene3D G3DSA:3.30.360.10 157 318 1.6E-103 T 14-10-2018 Tlie_1552 01b4ba9660084864d7573ed55dd28316 343 SUPERFAMILY SSF51735 3 178 2.33E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1092 e5007088e4c2ffe73153974c98de6b87 234 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 5 232 30.765 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tlie_1092 e5007088e4c2ffe73153974c98de6b87 234 Gene3D G3DSA:3.20.20.70 2 233 1.6E-67 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1092 e5007088e4c2ffe73153974c98de6b87 234 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 225 4.4E-37 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tlie_1092 e5007088e4c2ffe73153974c98de6b87 234 SMART SM00934 7 227 3.3E-62 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tlie_1092 e5007088e4c2ffe73153974c98de6b87 234 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 59 72 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tlie_1092 e5007088e4c2ffe73153974c98de6b87 234 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 8 227 1.1E-47 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tlie_1092 e5007088e4c2ffe73153974c98de6b87 234 SUPERFAMILY SSF51366 6 229 4.08E-54 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tlie_0847 0f811796cb89d6546045f20d425b6d1d 234 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 40 54 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Tlie_0847 0f811796cb89d6546045f20d425b6d1d 234 Gene3D G3DSA:3.20.20.70 3 227 4.7E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0847 0f811796cb89d6546045f20d425b6d1d 234 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 143 165 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Tlie_0847 0f811796cb89d6546045f20d425b6d1d 234 PIRSF PIRSF001461 8 233 5.2E-79 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Tlie_0847 0f811796cb89d6546045f20d425b6d1d 234 SUPERFAMILY SSF51366 12 226 2.41E-65 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tlie_0847 0f811796cb89d6546045f20d425b6d1d 234 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 13 222 2.4E-74 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Tlie_0847 0f811796cb89d6546045f20d425b6d1d 234 Pfam PF00834 Ribulose-phosphate 3 epimerase family 14 210 4.8E-70 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Tlie_1869 9c9143bea4faf8ac4fd865ccaf392360 302 SUPERFAMILY SSF103481 198 297 2.75E-12 T 14-10-2018 Tlie_1869 9c9143bea4faf8ac4fd865ccaf392360 302 Pfam PF00892 EamA-like transporter family 25 151 7.5E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tlie_1869 9c9143bea4faf8ac4fd865ccaf392360 302 Pfam PF00892 EamA-like transporter family 161 294 1.7E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tlie_1869 9c9143bea4faf8ac4fd865ccaf392360 302 SUPERFAMILY SSF103481 55 154 5.49E-10 T 14-10-2018 Tlie_0491 b03c407549cb92db0a466fdc9da921ae 383 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 116 2.0E-14 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 Tlie_0491 b03c407549cb92db0a466fdc9da921ae 383 SUPERFAMILY SSF55347 121 315 3.73E-32 T 14-10-2018 Tlie_0491 b03c407549cb92db0a466fdc9da921ae 383 SUPERFAMILY SSF51735 1 167 5.24E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_0491 b03c407549cb92db0a466fdc9da921ae 383 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 120 364 4.1E-37 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 Tlie_0491 b03c407549cb92db0a466fdc9da921ae 383 Gene3D G3DSA:3.30.360.10 121 319 3.6E-118 T 14-10-2018 Tlie_0491 b03c407549cb92db0a466fdc9da921ae 383 Gene3D G3DSA:3.40.50.720 2 370 3.6E-118 T 14-10-2018 Tlie_1800 088177adab70faf12cf8136dcd56021d 342 SUPERFAMILY SSF50331 240 334 3.74E-11 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Tlie_1800 088177adab70faf12cf8136dcd56021d 342 SMART SM00382 32 223 8.6E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1800 088177adab70faf12cf8136dcd56021d 342 Gene3D G3DSA:3.40.50.300 6 225 3.3E-66 T 14-10-2018 Tlie_1800 088177adab70faf12cf8136dcd56021d 342 Pfam PF08402 TOBE domain 272 333 1.3E-4 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Tlie_1800 088177adab70faf12cf8136dcd56021d 342 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_1800 088177adab70faf12cf8136dcd56021d 342 Gene3D G3DSA:2.40.50.940 226 334 2.4E-5 T 14-10-2018 Tlie_1800 088177adab70faf12cf8136dcd56021d 342 Gene3D G3DSA:2.40.50.140 279 332 2.4E-5 T 14-10-2018 Tlie_1800 088177adab70faf12cf8136dcd56021d 342 Pfam PF00005 ABC transporter 23 165 4.7E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1800 088177adab70faf12cf8136dcd56021d 342 SUPERFAMILY SSF52540 9 248 8.57E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0052 ef3c3e230b2bbe2eb0d1a62e577c804b 319 Gene3D G3DSA:3.90.650.10 133 315 1.5E-53 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tlie_0052 ef3c3e230b2bbe2eb0d1a62e577c804b 319 PIRSF PIRSF036407 2 319 1.4E-97 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 Tlie_0052 ef3c3e230b2bbe2eb0d1a62e577c804b 319 Pfam PF00586 AIR synthase related protein, N-terminal domain 18 125 6.0E-17 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Tlie_0052 ef3c3e230b2bbe2eb0d1a62e577c804b 319 SUPERFAMILY SSF55326 15 130 9.57E-31 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tlie_0052 ef3c3e230b2bbe2eb0d1a62e577c804b 319 SUPERFAMILY SSF56042 134 316 3.59E-46 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tlie_0052 ef3c3e230b2bbe2eb0d1a62e577c804b 319 Gene3D G3DSA:3.30.1330.10 2 130 4.6E-33 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tlie_0052 ef3c3e230b2bbe2eb0d1a62e577c804b 319 Pfam PF02769 AIR synthase related protein, C-terminal domain 137 314 9.2E-28 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Tlie_0052 ef3c3e230b2bbe2eb0d1a62e577c804b 319 TIGRFAM TIGR00476 selD: selenide, water dikinase 8 285 3.2E-97 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 Tlie_0324 293bcbf7e181fbf36fce176ac4cc7e14 175 SUPERFAMILY SSF55729 10 153 5.57E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tlie_0324 293bcbf7e181fbf36fce176ac4cc7e14 175 Pfam PF00583 Acetyltransferase (GNAT) family 46 144 3.9E-19 T 14-10-2018 IPR000182 GNAT domain Tlie_0324 293bcbf7e181fbf36fce176ac4cc7e14 175 Gene3D G3DSA:3.40.630.30 9 170 1.2E-44 T 14-10-2018 Tlie_0640 ff8849c3d65affb17e60b2cd24be2db8 97 SUPERFAMILY SSF55315 23 95 2.91E-15 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Tlie_0640 ff8849c3d65affb17e60b2cd24be2db8 97 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 25 96 9.6E-9 T 14-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 Tlie_0640 ff8849c3d65affb17e60b2cd24be2db8 97 Gene3D G3DSA:3.30.1330.30 23 92 1.2E-15 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Tlie_1688 5d7c9a0fbe5ac268072cbd1f75e7f97e 398 Gene3D G3DSA:3.40.50.12020 1 174 8.1E-60 T 14-10-2018 Tlie_1688 5d7c9a0fbe5ac268072cbd1f75e7f97e 398 Hamap MF_00677 UPF0261 protein . 1 398 49.751 T 14-10-2018 IPR008322 Uncharacterised protein family UPF0261 Tlie_1688 5d7c9a0fbe5ac268072cbd1f75e7f97e 398 Gene3D G3DSA:3.40.50.12030 180 398 2.0E-91 T 14-10-2018 Tlie_1688 5d7c9a0fbe5ac268072cbd1f75e7f97e 398 Pfam PF06792 Uncharacterised protein family (UPF0261) 4 396 3.9E-167 T 14-10-2018 IPR008322 Uncharacterised protein family UPF0261 Tlie_1688 5d7c9a0fbe5ac268072cbd1f75e7f97e 398 PIRSF PIRSF033271 1 398 2.3E-187 T 14-10-2018 IPR008322 Uncharacterised protein family UPF0261 Tlie_0338 ca17e287bb28cdaec4c738209af9d2c3 483 Gene3D G3DSA:1.20.1730.10 27 482 2.5E-86 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Tlie_0338 ca17e287bb28cdaec4c738209af9d2c3 483 Pfam PF00474 Sodium:solute symporter family 39 433 6.2E-51 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Tlie_1449 7c1c672d1a0504cc6367891456632625 277 Gene3D G3DSA:3.40.50.720 52 277 4.1E-60 T 14-10-2018 Tlie_1449 7c1c672d1a0504cc6367891456632625 277 SUPERFAMILY SSF69572 53 267 1.96E-65 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Tlie_1449 7c1c672d1a0504cc6367891456632625 277 Pfam PF00899 ThiF family 55 272 1.2E-46 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Tlie_1439 c93e1c06862d263977aba8e9820bb9ad 451 Pfam PF01554 MatE 246 407 1.1E-23 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tlie_1439 c93e1c06862d263977aba8e9820bb9ad 451 Pfam PF01554 MatE 25 186 4.5E-29 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tlie_1439 c93e1c06862d263977aba8e9820bb9ad 451 PIRSF PIRSF006603 1 445 3.5E-95 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tlie_1439 c93e1c06862d263977aba8e9820bb9ad 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 416 5.7E-64 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tlie_0932 a730b206dbe4512275c5e4fddd1053eb 659 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 146 584 5.2E-98 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tlie_0932 a730b206dbe4512275c5e4fddd1053eb 659 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 49 655 2.9E-221 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ Tlie_0199 d4c1962fb21093af32a32bca467c6bef 622 SUPERFAMILY SSF53067 409 604 2.02E-27 T 14-10-2018 Tlie_0199 d4c1962fb21093af32a32bca467c6bef 622 Gene3D G3DSA:3.30.420.40 4 604 2.2E-237 T 14-10-2018 Tlie_0199 d4c1962fb21093af32a32bca467c6bef 622 Gene3D G3DSA:3.90.470.30 80 373 2.2E-237 T 14-10-2018 Tlie_0199 d4c1962fb21093af32a32bca467c6bef 622 SUPERFAMILY SSF82317 96 257 1.96E-64 T 14-10-2018 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily Tlie_0199 d4c1962fb21093af32a32bca467c6bef 622 SUPERFAMILY SSF53067 253 406 1.55E-36 T 14-10-2018 Tlie_0199 d4c1962fb21093af32a32bca467c6bef 622 TIGRFAM TIGR04491 reactive_PduG: diol dehydratase reactivase alpha subunit 4 604 1.7E-288 T 14-10-2018 IPR009191 Diol dehydratase-reactivating factor alpha subunit Tlie_0199 d4c1962fb21093af32a32bca467c6bef 622 Gene3D G3DSA:2.40.50.140 469 514 2.2E-237 T 14-10-2018 Tlie_0199 d4c1962fb21093af32a32bca467c6bef 622 Pfam PF08841 Diol dehydratase reactivase ATPase-like domain 278 604 1.7E-156 T 14-10-2018 IPR030994 Diol dehydratase reactivase ATPase-like domain Tlie_0199 d4c1962fb21093af32a32bca467c6bef 622 Gene3D G3DSA:3.50.30.70 100 250 2.2E-237 T 14-10-2018 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain superfamily Tlie_0199 d4c1962fb21093af32a32bca467c6bef 622 Gene3D G3DSA:3.30.420.40 408 586 2.2E-237 T 14-10-2018 Tlie_0341 7b71df8eb817cf5a12de10795dc2765d 132 Gene3D G3DSA:3.30.70.1290 1 131 7.1E-39 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Tlie_0341 7b71df8eb817cf5a12de10795dc2765d 132 SUPERFAMILY SSF143422 2 130 1.09E-43 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Tlie_0341 7b71df8eb817cf5a12de10795dc2765d 132 SMART SM01321 10 129 7.4E-38 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Tlie_0341 7b71df8eb817cf5a12de10795dc2765d 132 Pfam PF01797 Transposase IS200 like 11 129 8.7E-39 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Tlie_0313 301deadfa6bb506ed393d7183aabeca0 651 Pfam PF09972 Predicted membrane protein (DUF2207) 31 581 9.1E-81 T 14-10-2018 IPR018702 Protein of unknown function DUF2207, membrane Tlie_0214 a3a71ed9c827ffdd95dc1c0bd254234b 51 Pfam PF12841 YvrJ protein family 8 40 1.1E-15 T 14-10-2018 IPR024419 Protein of unknown function YvrJ Tlie_1639 928f6a93a8b7c116932beff814f01032 409 Pfam PF02687 FtsX-like permease family 315 402 1.1E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Tlie_1639 928f6a93a8b7c116932beff814f01032 409 Pfam PF12704 MacB-like periplasmic core domain 22 248 2.4E-39 T 14-10-2018 IPR025857 MacB-like periplasmic core domain Tlie_0055 9166c308b746fe4b05efab51366da824 482 SUPERFAMILY SSF55785 19 146 5.52E-12 T 14-10-2018 IPR035965 PAS domain superfamily Tlie_0055 9166c308b746fe4b05efab51366da824 482 Pfam PF13185 GAF domain 172 308 9.0E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tlie_0055 9166c308b746fe4b05efab51366da824 482 Gene3D G3DSA:3.30.70.270 316 480 1.4E-47 T 14-10-2018 Tlie_0055 9166c308b746fe4b05efab51366da824 482 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 319 475 1.8E-39 T 14-10-2018 IPR000160 GGDEF domain Tlie_0055 9166c308b746fe4b05efab51366da824 482 Pfam PF13426 PAS domain 23 143 6.1E-10 T 14-10-2018 IPR000014 PAS domain Tlie_0055 9166c308b746fe4b05efab51366da824 482 SMART SM00267 311 478 2.7E-42 T 14-10-2018 IPR000160 GGDEF domain Tlie_0055 9166c308b746fe4b05efab51366da824 482 Gene3D G3DSA:3.30.450.40 149 309 1.5E-22 T 14-10-2018 IPR029016 GAF-like domain superfamily Tlie_0055 9166c308b746fe4b05efab51366da824 482 SMART SM00065 173 319 0.0049 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tlie_0055 9166c308b746fe4b05efab51366da824 482 SUPERFAMILY SSF55073 327 475 8.63E-41 T 14-10-2018 IPR029787 Nucleotide cyclase Tlie_0055 9166c308b746fe4b05efab51366da824 482 SUPERFAMILY SSF55781 141 307 5.67E-23 T 14-10-2018 Tlie_0055 9166c308b746fe4b05efab51366da824 482 Gene3D G3DSA:3.30.450.20 12 148 8.0E-18 T 14-10-2018 Tlie_0055 9166c308b746fe4b05efab51366da824 482 Pfam PF00990 Diguanylate cyclase, GGDEF domain 323 477 1.2E-39 T 14-10-2018 IPR000160 GGDEF domain Tlie_1124 0ff402589063fdbd0a757ce2b64104ad 193 SUPERFAMILY SSF52540 3 189 4.62E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1124 0ff402589063fdbd0a757ce2b64104ad 193 SMART SM00072 5 187 2.0E-65 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Tlie_1124 0ff402589063fdbd0a757ce2b64104ad 193 Pfam PF00625 Guanylate kinase 8 185 5.8E-51 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Tlie_1124 0ff402589063fdbd0a757ce2b64104ad 193 Hamap MF_00328 Guanylate kinase [gmk]. 4 187 36.97 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Tlie_1124 0ff402589063fdbd0a757ce2b64104ad 193 Gene3D G3DSA:3.40.50.300 10 183 1.4E-70 T 14-10-2018 Tlie_1124 0ff402589063fdbd0a757ce2b64104ad 193 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 7 184 5.3E-75 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Tlie_1124 0ff402589063fdbd0a757ce2b64104ad 193 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 Tlie_1124 0ff402589063fdbd0a757ce2b64104ad 193 Gene3D G3DSA:3.30.63.10 37 96 1.4E-70 T 14-10-2018 Tlie_1380 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_0234 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_1214 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_1337 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_1532 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_1412 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_0009 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_1392 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_1221 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_1891 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_1786 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_0242 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tlie_0582 52fc8cfbee40070e9fd5ee405f51ab26 532 SUPERFAMILY SSF52317 288 529 4.13E-81 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_0582 52fc8cfbee40070e9fd5ee405f51ab26 532 Pfam PF06418 CTP synthase N-terminus 3 265 4.2E-127 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Tlie_0582 52fc8cfbee40070e9fd5ee405f51ab26 532 Gene3D G3DSA:3.40.50.880 285 532 1.1E-106 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_0582 52fc8cfbee40070e9fd5ee405f51ab26 532 Hamap MF_01227 CTP synthase [pyrG]. 2 531 51.52 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Tlie_0582 52fc8cfbee40070e9fd5ee405f51ab26 532 Pfam PF00117 Glutamine amidotransferase class-I 302 526 6.1E-58 T 14-10-2018 IPR017926 Glutamine amidotransferase Tlie_0582 52fc8cfbee40070e9fd5ee405f51ab26 532 SUPERFAMILY SSF52540 3 265 1.24E-121 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0582 52fc8cfbee40070e9fd5ee405f51ab26 532 Gene3D G3DSA:3.40.50.300 1 284 8.3E-131 T 14-10-2018 Tlie_0582 52fc8cfbee40070e9fd5ee405f51ab26 532 TIGRFAM TIGR00337 PyrG: CTP synthase 3 526 5.9E-248 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Tlie_1207 a077eaa0854cb02005f0f0f9040a676a 164 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 7 139 3.1E-24 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Tlie_1082 17dcfc5cadbc729b5cfb262d5a0a56dd 263 SUPERFAMILY SSF52540 49 199 1.59E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1082 17dcfc5cadbc729b5cfb262d5a0a56dd 263 Pfam PF13177 DNA polymerase III, delta subunit 44 169 1.1E-20 T 14-10-2018 Tlie_1082 17dcfc5cadbc729b5cfb262d5a0a56dd 263 Gene3D G3DSA:3.40.50.300 15 170 3.6E-21 T 14-10-2018 Tlie_1290 662e4ac386f1557002f0f1dbef73e1d7 428 PIRSF PIRSF011588 1 427 9.6E-207 T 14-10-2018 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta GO:0050485|GO:0055114 Tlie_1290 662e4ac386f1557002f0f1dbef73e1d7 428 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 2 424 1.4E-212 T 14-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 Tlie_1225 cd2bae935483b8d243c2a7d2b1da7d96 150 SUPERFAMILY SSF74982 4 130 1.31E-51 T 14-10-2018 IPR023620 Small protein B Tlie_1225 cd2bae935483b8d243c2a7d2b1da7d96 150 Gene3D G3DSA:2.40.280.10 2 126 1.5E-51 T 14-10-2018 IPR023620 Small protein B Tlie_1225 cd2bae935483b8d243c2a7d2b1da7d96 150 TIGRFAM TIGR00086 smpB: SsrA-binding protein 6 148 4.5E-59 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Tlie_1225 cd2bae935483b8d243c2a7d2b1da7d96 150 Hamap MF_00023 SsrA-binding protein [smpB]. 1 150 72.893 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Tlie_1225 cd2bae935483b8d243c2a7d2b1da7d96 150 ProSitePatterns PS01317 SsrA-binding protein. 24 36 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site Tlie_1225 cd2bae935483b8d243c2a7d2b1da7d96 150 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 6 130 5.0E-41 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Tlie_1225 cd2bae935483b8d243c2a7d2b1da7d96 150 Pfam PF01668 SmpB protein 6 148 7.5E-63 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Tlie_0264 0bf04b5797b882ea5c456bbc9d7173dc 234 Gene3D G3DSA:3.30.70.2660 2 161 5.1E-7 T 14-10-2018 Tlie_0264 0bf04b5797b882ea5c456bbc9d7173dc 234 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 4 44 2.0E-14 T 14-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal Tlie_0264 0bf04b5797b882ea5c456bbc9d7173dc 234 TIGRFAM TIGR02592 cas_Cas5h: CRISPR-associated protein Cas5, subtype I-B/HMARI 4 231 1.0E-30 T 14-10-2018 IPR013421 CRISPR-associated protein Cas5, HALMA Tlie_0264 0bf04b5797b882ea5c456bbc9d7173dc 234 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 4 59 3.5E-11 T 14-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 Tlie_1233 0107cb40a554baba72241926478b4cc4 195 Pfam PF04191 Phospholipid methyltransferase 40 138 1.7E-13 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 Tlie_1233 0107cb40a554baba72241926478b4cc4 195 Gene3D G3DSA:1.20.120.1630 3 152 2.7E-26 T 14-10-2018 Tlie_0513 7a10246d170f97703048e81e1489810f 641 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 26 631 7.4E-202 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ Tlie_0513 7a10246d170f97703048e81e1489810f 641 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 122 556 4.3E-91 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tlie_1551 cea3a8aecdd3cbd74f2cfbc17ec59e18 595 SUPERFAMILY SSF56228 2 212 1.02E-65 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_1551 cea3a8aecdd3cbd74f2cfbc17ec59e18 595 SUPERFAMILY SSF48310 215 595 7.85E-103 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1551 cea3a8aecdd3cbd74f2cfbc17ec59e18 595 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 4 207 1.7E-74 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1551 cea3a8aecdd3cbd74f2cfbc17ec59e18 595 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 222 593 1.0E-112 T 14-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1551 cea3a8aecdd3cbd74f2cfbc17ec59e18 595 SMART SM00790 1 209 4.6E-97 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1551 cea3a8aecdd3cbd74f2cfbc17ec59e18 595 Gene3D G3DSA:1.10.599.10 241 593 3.7E-114 T 14-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Tlie_1551 cea3a8aecdd3cbd74f2cfbc17ec59e18 595 Gene3D G3DSA:1.10.569.10 243 421 3.7E-114 T 14-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Tlie_1551 cea3a8aecdd3cbd74f2cfbc17ec59e18 595 Gene3D G3DSA:3.60.9.10 1 213 1.1E-75 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_0519 9d7fd9655fa8cc83b755b77f87dc5800 147 Pfam PF03473 MOSC domain 43 142 9.9E-7 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 Tlie_0519 9d7fd9655fa8cc83b755b77f87dc5800 147 Gene3D G3DSA:2.40.33.20 1 145 6.8E-31 T 14-10-2018 Tlie_0519 9d7fd9655fa8cc83b755b77f87dc5800 147 SUPERFAMILY SSF50800 2 143 3.56E-35 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Tlie_0250 3dc0ce2fd64581788c631f1043a6fd17 217 Pfam PF00583 Acetyltransferase (GNAT) family 74 170 7.8E-7 T 14-10-2018 IPR000182 GNAT domain Tlie_0250 3dc0ce2fd64581788c631f1043a6fd17 217 Gene3D G3DSA:3.40.630.30 20 193 5.9E-15 T 14-10-2018 Tlie_0250 3dc0ce2fd64581788c631f1043a6fd17 217 SUPERFAMILY SSF55729 26 213 1.42E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tlie_0343 94cf4e60d5303bec6406ee96e2c8a0c1 400 Gene3D G3DSA:1.20.1250.20 211 384 2.7E-10 T 14-10-2018 Tlie_0343 94cf4e60d5303bec6406ee96e2c8a0c1 400 SUPERFAMILY SSF103473 25 383 6.28E-27 T 14-10-2018 IPR036259 MFS transporter superfamily Tlie_0343 94cf4e60d5303bec6406ee96e2c8a0c1 400 Gene3D G3DSA:1.20.1250.20 18 204 2.1E-9 T 14-10-2018 Tlie_0343 94cf4e60d5303bec6406ee96e2c8a0c1 400 Pfam PF07690 Major Facilitator Superfamily 28 342 2.8E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tlie_1638 d54870dbde4d348510d8a599e7055ece 234 Gene3D G3DSA:3.40.50.300 3 232 2.9E-64 T 14-10-2018 Tlie_1638 d54870dbde4d348510d8a599e7055ece 234 Pfam PF00005 ABC transporter 25 173 1.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1638 d54870dbde4d348510d8a599e7055ece 234 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_1638 d54870dbde4d348510d8a599e7055ece 234 SUPERFAMILY SSF52540 5 228 1.5E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1638 d54870dbde4d348510d8a599e7055ece 234 SMART SM00382 34 224 6.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1748 3739a5bc101c80e52d24cad7599a61a1 374 Gene3D G3DSA:3.40.50.11400 27 137 7.5E-77 T 14-10-2018 Tlie_1748 3739a5bc101c80e52d24cad7599a61a1 374 Gene3D G3DSA:3.40.50.11390 138 296 7.5E-77 T 14-10-2018 Tlie_1748 3739a5bc101c80e52d24cad7599a61a1 374 SUPERFAMILY SSF53822 37 213 8.54E-7 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Tlie_1748 3739a5bc101c80e52d24cad7599a61a1 374 Pfam PF12683 Protein of unknown function (DUF3798) 27 297 1.6E-126 T 14-10-2018 IPR024258 Protein of unknown function DUF3798 Tlie_0098 8325652d2b1339d20f5fd58d49c8b136 440 Gene3D G3DSA:1.10.3210.10 5 311 3.5E-56 T 14-10-2018 Tlie_0098 8325652d2b1339d20f5fd58d49c8b136 440 Pfam PF01966 HD domain 150 269 1.1E-14 T 14-10-2018 IPR006674 HD domain Tlie_0098 8325652d2b1339d20f5fd58d49c8b136 440 SMART SM00471 135 279 1.3E-9 T 14-10-2018 IPR003607 HD/PDEase domain Tlie_0098 8325652d2b1339d20f5fd58d49c8b136 440 SUPERFAMILY SSF109604 134 305 4.85E-27 T 14-10-2018 Tlie_0541 fc8e4f0eb04302807cb08ea4b9b371a3 406 SUPERFAMILY SSF53098 178 330 1.12E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_0541 fc8e4f0eb04302807cb08ea4b9b371a3 406 SUPERFAMILY SSF46689 20 121 6.81E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0143 ef37bb1d138d710e490c396b55cccd97 164 Gene3D G3DSA:3.30.70.1150 80 156 1.3E-23 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Tlie_0143 ef37bb1d138d710e490c396b55cccd97 164 SUPERFAMILY SSF55021 79 157 7.85E-20 T 14-10-2018 Tlie_0143 ef37bb1d138d710e490c396b55cccd97 164 Gene3D G3DSA:3.30.70.260 1 78 6.9E-35 T 14-10-2018 Tlie_0143 ef37bb1d138d710e490c396b55cccd97 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 3.2E-56 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Tlie_0143 ef37bb1d138d710e490c396b55cccd97 164 Pfam PF13710 ACT domain 11 73 2.1E-16 T 14-10-2018 Tlie_0143 ef37bb1d138d710e490c396b55cccd97 164 SUPERFAMILY SSF55021 1 76 7.64E-22 T 14-10-2018 Tlie_0143 ef37bb1d138d710e490c396b55cccd97 164 Pfam PF10369 Small subunit of acetolactate synthase 84 156 1.1E-22 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Tlie_0143 ef37bb1d138d710e490c396b55cccd97 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 2.0E-23 T 14-10-2018 Tlie_0486 c75bde9db005e9e2c4b7ca3acd877cbf 399 SUPERFAMILY SSF56796 14 394 1.16E-98 T 14-10-2018 Tlie_0486 c75bde9db005e9e2c4b7ca3acd877cbf 399 Pfam PF00465 Iron-containing alcohol dehydrogenase 18 370 3.1E-93 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Tlie_0486 c75bde9db005e9e2c4b7ca3acd877cbf 399 Gene3D G3DSA:3.40.50.1970 10 196 2.9E-51 T 14-10-2018 Tlie_0486 c75bde9db005e9e2c4b7ca3acd877cbf 399 Gene3D G3DSA:1.20.1090.10 201 396 4.2E-42 T 14-10-2018 Tlie_1426 642b6ac74db11fd9dccc623c8af093a4 121 Hamap MF_00245 UPF0122 protein . 6 112 14.438 T 14-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like Tlie_1426 642b6ac74db11fd9dccc623c8af093a4 121 Gene3D G3DSA:1.10.10.10 1 115 2.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1426 642b6ac74db11fd9dccc623c8af093a4 121 SUPERFAMILY SSF88659 5 95 4.49E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tlie_1426 642b6ac74db11fd9dccc623c8af093a4 121 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 6 92 1.0E-18 T 14-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like Tlie_0791 e8b18c7799271a425a6cd42066876469 178 Gene3D G3DSA:2.30.110.10 6 173 1.1E-33 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Tlie_0791 e8b18c7799271a425a6cd42066876469 178 SMART SM00903 11 157 1.3E-14 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Tlie_0791 e8b18c7799271a425a6cd42066876469 178 SUPERFAMILY SSF50475 8 156 1.42E-30 T 14-10-2018 Tlie_0791 e8b18c7799271a425a6cd42066876469 178 Pfam PF01613 Flavin reductase like domain 15 152 4.1E-15 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Tlie_1692 e0f3b1c68ac1e1435a86b6ec85931096 530 SUPERFAMILY SSF51338 4 528 2.54E-17 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tlie_1692 e0f3b1c68ac1e1435a86b6ec85931096 530 Pfam PF07969 Amidohydrolase family 52 526 6.7E-93 T 14-10-2018 IPR013108 Amidohydrolase 3 Tlie_1692 e0f3b1c68ac1e1435a86b6ec85931096 530 SUPERFAMILY SSF51556 61 486 3.0E-34 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tlie_1692 e0f3b1c68ac1e1435a86b6ec85931096 530 Gene3D G3DSA:3.10.310.70 80 197 5.8E-135 T 14-10-2018 Tlie_1692 e0f3b1c68ac1e1435a86b6ec85931096 530 Gene3D G3DSA:3.20.20.140 62 485 5.8E-135 T 14-10-2018 Tlie_1692 e0f3b1c68ac1e1435a86b6ec85931096 530 Gene3D G3DSA:2.30.40.10 8 502 5.8E-135 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tlie_1445 2494e5334821b1648e4f82fc599ff630 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 3.0E-25 T 14-10-2018 IPR007347 Sporulation stage V, protein S Tlie_1445 2494e5334821b1648e4f82fc599ff630 86 Gene3D G3DSA:3.30.110.20 1 86 8.6E-37 T 14-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 Tlie_1445 2494e5334821b1648e4f82fc599ff630 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 83 4.5E-40 T 14-10-2018 IPR007347 Sporulation stage V, protein S Tlie_0041 d7141fd2a5960fb987591cf16e203b7c 272 Gene3D G3DSA:3.40.190.10 106 228 2.8E-88 T 14-10-2018 Tlie_0041 d7141fd2a5960fb987591cf16e203b7c 272 Gene3D G3DSA:3.40.190.10 30 271 2.8E-88 T 14-10-2018 Tlie_0041 d7141fd2a5960fb987591cf16e203b7c 272 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 24 271 6.6E-85 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 Tlie_0041 d7141fd2a5960fb987591cf16e203b7c 272 Pfam PF12849 PBP superfamily domain 28 258 1.5E-41 T 14-10-2018 IPR024370 PBP domain Tlie_0041 d7141fd2a5960fb987591cf16e203b7c 272 SUPERFAMILY SSF53850 21 272 2.77E-78 T 14-10-2018 Tlie_0825 1d2dee99951608ea498ae81c8126fe8c 326 Pfam PF00294 pfkB family carbohydrate kinase 9 303 4.2E-38 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Tlie_0825 1d2dee99951608ea498ae81c8126fe8c 326 SUPERFAMILY SSF53613 9 312 8.78E-52 T 14-10-2018 IPR029056 Ribokinase-like Tlie_0825 1d2dee99951608ea498ae81c8126fe8c 326 Gene3D G3DSA:3.40.1190.20 1 312 1.7E-95 T 14-10-2018 IPR029056 Ribokinase-like Tlie_0059 ec0488ab5d8478de21a94509825e02f5 292 Pfam PF03313 Serine dehydratase alpha chain 37 272 1.8E-62 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Tlie_0059 ec0488ab5d8478de21a94509825e02f5 292 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 5 284 8.9E-81 T 14-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Tlie_1515 7c38cbff3fcf99c0cee8f16d0fc1cc3a 173 Gene3D G3DSA:1.20.1200.10 15 172 1.3E-38 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Tlie_1515 7c38cbff3fcf99c0cee8f16d0fc1cc3a 173 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 23 167 7.0E-19 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Tlie_1515 7c38cbff3fcf99c0cee8f16d0fc1cc3a 173 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 7 170 1.4E-40 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Tlie_1515 7c38cbff3fcf99c0cee8f16d0fc1cc3a 173 SUPERFAMILY SSF89028 6 168 8.24E-40 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Tlie_1515 7c38cbff3fcf99c0cee8f16d0fc1cc3a 173 Pfam PF01923 Cobalamin adenosyltransferase 6 162 7.7E-40 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Tlie_1217 c9eb4440e9835c641ac08029e6676aca 492 Pfam PF00474 Sodium:solute symporter family 31 432 1.7E-38 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Tlie_1217 c9eb4440e9835c641ac08029e6676aca 492 Gene3D G3DSA:1.20.1730.10 19 490 3.9E-61 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Tlie_1575 f855e22edd35bc6110f420d9e3b03bc7 309 Gene3D G3DSA:3.30.70.20 62 108 1.3E-16 T 14-10-2018 Tlie_1575 f855e22edd35bc6110f420d9e3b03bc7 309 PIRSF PIRSF000371 4 309 1.1E-104 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Tlie_1575 f855e22edd35bc6110f420d9e3b03bc7 309 Pfam PF13353 4Fe-4S single cluster domain 24 178 1.7E-13 T 14-10-2018 Tlie_1575 f855e22edd35bc6110f420d9e3b03bc7 309 SUPERFAMILY SSF102114 36 276 1.2E-19 T 14-10-2018 Tlie_1575 f855e22edd35bc6110f420d9e3b03bc7 309 ProSitePatterns PS01087 Radical activating enzymes signature. 25 46 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Tlie_1575 f855e22edd35bc6110f420d9e3b03bc7 309 Pfam PF04055 Radical SAM superfamily 32 248 4.4E-28 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_1575 f855e22edd35bc6110f420d9e3b03bc7 309 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 14 301 3.2E-109 T 14-10-2018 Tlie_1575 f855e22edd35bc6110f420d9e3b03bc7 309 Gene3D G3DSA:3.20.20.70 10 61 3.2E-16 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1575 f855e22edd35bc6110f420d9e3b03bc7 309 SUPERFAMILY SSF54862 12 151 1.06E-25 T 14-10-2018 Tlie_1575 f855e22edd35bc6110f420d9e3b03bc7 309 Gene3D G3DSA:3.80.30.10 131 309 1.0E-66 T 14-10-2018 Tlie_1575 f855e22edd35bc6110f420d9e3b03bc7 309 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 92 103 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_0635 7fb65497935e6fcee2d10f6815893793 263 SUPERFAMILY SSF51556 7 260 4.94E-85 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tlie_0635 7fb65497935e6fcee2d10f6815893793 263 Gene3D G3DSA:3.20.20.140 2 262 5.4E-94 T 14-10-2018 Tlie_0635 7fb65497935e6fcee2d10f6815893793 263 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 7 260 9.4E-83 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Tlie_0635 7fb65497935e6fcee2d10f6815893793 263 PIRSF PIRSF005902 1 263 1.6E-80 T 14-10-2018 IPR001130 TatD family GO:0016788 Tlie_0635 7fb65497935e6fcee2d10f6815893793 263 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 131 141 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Tlie_0635 7fb65497935e6fcee2d10f6815893793 263 Pfam PF01026 TatD related DNase 8 259 1.4E-75 T 14-10-2018 IPR001130 TatD family GO:0016788 Tlie_0603 d867c0d9baf0af95edb29bf97c5a4aca 373 Pfam PF01594 AI-2E family transporter 21 354 3.4E-47 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like Tlie_1698 266c4d9d0dc402327688d34de2d2654a 345 Gene3D G3DSA:3.40.50.1100 15 322 1.3E-113 T 14-10-2018 Tlie_1698 266c4d9d0dc402327688d34de2d2654a 345 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 12 316 5.3E-52 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tlie_1698 266c4d9d0dc402327688d34de2d2654a 345 Gene3D G3DSA:3.40.50.1100 49 154 1.3E-113 T 14-10-2018 Tlie_1698 266c4d9d0dc402327688d34de2d2654a 345 PIRSF PIRSF006278 3 333 3.9E-92 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase Tlie_1698 266c4d9d0dc402327688d34de2d2654a 345 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 11 326 1.4E-101 T 14-10-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 Tlie_1698 266c4d9d0dc402327688d34de2d2654a 345 SUPERFAMILY SSF53686 11 323 1.7E-83 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tlie_0762 a55c35dce2c6fe451be965e3483fe0c1 299 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 272 4.8E-102 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Tlie_0762 a55c35dce2c6fe451be965e3483fe0c1 299 Gene3D G3DSA:3.90.550.10 1 298 5.0E-81 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_0762 a55c35dce2c6fe451be965e3483fe0c1 299 Pfam PF00483 Nucleotidyl transferase 16 275 8.1E-29 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Tlie_0762 a55c35dce2c6fe451be965e3483fe0c1 299 SUPERFAMILY SSF53448 12 279 9.24E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_0141 19d0e7eef24190463ac85765074b22cf 513 SMART SM00917 370 501 4.8E-35 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tlie_0141 19d0e7eef24190463ac85765074b22cf 513 SUPERFAMILY SSF110921 397 500 1.44E-24 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tlie_0141 19d0e7eef24190463ac85765074b22cf 513 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 6 498 2.7E-213 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tlie_0141 19d0e7eef24190463ac85765074b22cf 513 Gene3D G3DSA:3.30.160.270 393 502 3.1E-12 T 14-10-2018 Tlie_0141 19d0e7eef24190463ac85765074b22cf 513 Pfam PF00682 HMGL-like 6 274 4.3E-101 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Tlie_0141 19d0e7eef24190463ac85765074b22cf 513 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tlie_0141 19d0e7eef24190463ac85765074b22cf 513 Gene3D G3DSA:1.10.238.260 281 392 9.9E-37 T 14-10-2018 Tlie_0141 19d0e7eef24190463ac85765074b22cf 513 SUPERFAMILY SSF51569 4 292 2.2E-99 T 14-10-2018 Tlie_0141 19d0e7eef24190463ac85765074b22cf 513 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 500 4.9E-34 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tlie_0141 19d0e7eef24190463ac85765074b22cf 513 Gene3D G3DSA:3.20.20.70 3 277 3.6E-113 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0141 19d0e7eef24190463ac85765074b22cf 513 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 3 510 41.519 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tlie_0141 19d0e7eef24190463ac85765074b22cf 513 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 200 213 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tlie_0994 c3d25104586440a552a0bfc10986f170 649 Pfam PF06202 Amylo-alpha-1,6-glucosidase 285 640 6.3E-66 T 14-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 Tlie_0994 c3d25104586440a552a0bfc10986f170 649 Gene3D G3DSA:1.50.10.10 301 626 2.6E-25 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Tlie_0994 c3d25104586440a552a0bfc10986f170 649 Pfam PF12439 Glycogen debranching enzyme N terminal 17 230 1.1E-51 T 14-10-2018 IPR024742 Glycogen debranching enzyme, bacterial and archaeal type, N-terminal Tlie_0994 c3d25104586440a552a0bfc10986f170 649 SUPERFAMILY SSF48208 289 641 1.85E-39 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Tlie_1063 e12fb20467022f6b7fabdbff1d7a625a 431 Pfam PF02875 Mur ligase family, glutamate ligase domain 298 367 2.2E-10 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tlie_1063 e12fb20467022f6b7fabdbff1d7a625a 431 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 141 156 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Tlie_1063 e12fb20467022f6b7fabdbff1d7a625a 431 SUPERFAMILY SSF53623 8 298 2.29E-71 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tlie_1063 e12fb20467022f6b7fabdbff1d7a625a 431 Pfam PF08245 Mur ligase middle domain 51 272 1.4E-8 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tlie_1063 e12fb20467022f6b7fabdbff1d7a625a 431 Gene3D G3DSA:3.90.190.20 300 431 1.3E-28 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tlie_1063 e12fb20467022f6b7fabdbff1d7a625a 431 Gene3D G3DSA:3.40.1190.10 5 299 5.6E-80 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tlie_1063 e12fb20467022f6b7fabdbff1d7a625a 431 PIRSF PIRSF001563 1 431 2.0E-111 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Tlie_1063 e12fb20467022f6b7fabdbff1d7a625a 431 TIGRFAM TIGR01499 folC: bifunctional protein FolC 27 431 2.3E-103 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Tlie_1063 e12fb20467022f6b7fabdbff1d7a625a 431 SUPERFAMILY SSF53244 300 431 4.94E-25 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tlie_0805 e182aef0815b9df2d4915c851f243b69 425 SUPERFAMILY SSF56954 11 424 1.44E-70 T 14-10-2018 Tlie_0805 e182aef0815b9df2d4915c851f243b69 425 Pfam PF02321 Outer membrane efflux protein 244 419 1.6E-28 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tlie_0805 e182aef0815b9df2d4915c851f243b69 425 Pfam PF02321 Outer membrane efflux protein 38 215 3.5E-20 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tlie_0805 e182aef0815b9df2d4915c851f243b69 425 Gene3D G3DSA:1.20.1600.10 32 424 8.9E-67 T 14-10-2018 Tlie_1273 a6e1c9a765bf0dc18f81081df4a1b7c1 328 SUPERFAMILY SSF56042 156 316 6.43E-27 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tlie_1273 a6e1c9a765bf0dc18f81081df4a1b7c1 328 Pfam PF00586 AIR synthase related protein, N-terminal domain 43 148 4.9E-17 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Tlie_1273 a6e1c9a765bf0dc18f81081df4a1b7c1 328 PIRSF PIRSF005644 6 326 1.3E-69 T 14-10-2018 IPR011854 Carbamoyl dehydratase HypE Tlie_1273 a6e1c9a765bf0dc18f81081df4a1b7c1 328 Gene3D G3DSA:3.90.650.10 151 325 3.0E-35 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tlie_1273 a6e1c9a765bf0dc18f81081df4a1b7c1 328 SUPERFAMILY SSF55326 11 150 1.5E-26 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tlie_1273 a6e1c9a765bf0dc18f81081df4a1b7c1 328 Gene3D G3DSA:3.30.1330.10 6 150 8.0E-29 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tlie_1273 a6e1c9a765bf0dc18f81081df4a1b7c1 328 Pfam PF02769 AIR synthase related protein, C-terminal domain 160 312 1.3E-18 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Tlie_0619 149b0edd9f08dc9812f6a80ef7084090 211 Pfam PF00753 Metallo-beta-lactamase superfamily 14 191 2.8E-24 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tlie_0619 149b0edd9f08dc9812f6a80ef7084090 211 SUPERFAMILY SSF56281 1 207 6.42E-48 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_0619 149b0edd9f08dc9812f6a80ef7084090 211 Gene3D G3DSA:3.60.15.10 1 209 7.5E-59 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_0619 149b0edd9f08dc9812f6a80ef7084090 211 SMART SM00849 12 191 3.7E-32 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tlie_1789 c4fe9cbedb3b147638dde3027668d4d2 393 Gene3D G3DSA:1.20.1250.20 9 388 5.7E-49 T 14-10-2018 Tlie_1789 c4fe9cbedb3b147638dde3027668d4d2 393 SUPERFAMILY SSF103473 12 388 1.29E-56 T 14-10-2018 IPR036259 MFS transporter superfamily Tlie_1789 c4fe9cbedb3b147638dde3027668d4d2 393 Pfam PF07690 Major Facilitator Superfamily 19 355 1.2E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tlie_1644 5229a3ff444829c59788a2200c946302 225 Pfam PF00005 ABC transporter 21 168 7.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1644 5229a3ff444829c59788a2200c946302 225 SUPERFAMILY SSF52540 4 215 6.21E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1644 5229a3ff444829c59788a2200c946302 225 Gene3D G3DSA:3.40.50.300 3 224 5.6E-67 T 14-10-2018 Tlie_1644 5229a3ff444829c59788a2200c946302 225 SMART SM00382 30 213 4.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0520 fddf1710160359368e4b50d9e205c9e9 137 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 106 8.4E-26 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Tlie_0520 fddf1710160359368e4b50d9e205c9e9 137 Gene3D G3DSA:3.10.129.10 2 136 6.2E-38 T 14-10-2018 Tlie_0520 fddf1710160359368e4b50d9e205c9e9 137 Pfam PF03061 Thioesterase superfamily 18 100 2.8E-13 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Tlie_0520 fddf1710160359368e4b50d9e205c9e9 137 SUPERFAMILY SSF54637 4 131 1.56E-38 T 14-10-2018 IPR029069 HotDog domain superfamily Tlie_0520 fddf1710160359368e4b50d9e205c9e9 137 PIRSF PIRSF003230 1 137 6.6E-38 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Tlie_1904 4ff5ce574b6ddcf96e0a6994760673ef 229 Gene3D G3DSA:3.20.20.70 7 228 1.9E-21 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1904 4ff5ce574b6ddcf96e0a6994760673ef 229 SUPERFAMILY SSF102114 12 204 1.83E-18 T 14-10-2018 Tlie_1904 4ff5ce574b6ddcf96e0a6994760673ef 229 Pfam PF04055 Radical SAM superfamily 25 180 1.5E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_0360 ac15490443236ec15d307d271fe6c9a1 157 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 12 146 1.4E-15 T 14-10-2018 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 Tlie_0360 ac15490443236ec15d307d271fe6c9a1 157 Gene3D G3DSA:3.10.450.50 1 149 3.4E-31 T 14-10-2018 Tlie_0360 ac15490443236ec15d307d271fe6c9a1 157 SUPERFAMILY SSF54427 8 146 6.39E-16 T 14-10-2018 IPR032710 NTF2-like domain superfamily Tlie_0920 0bfa1a0a607fa67e5e7a89741f3fcac0 492 Gene3D G3DSA:3.20.20.70 4 490 6.0E-221 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0920 0bfa1a0a607fa67e5e7a89741f3fcac0 492 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 298 310 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Tlie_0920 0bfa1a0a607fa67e5e7a89741f3fcac0 492 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 12 458 3.2E-192 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Tlie_0920 0bfa1a0a607fa67e5e7a89741f3fcac0 492 SMART SM01240 11 477 0.0 T 14-10-2018 Tlie_0920 0bfa1a0a607fa67e5e7a89741f3fcac0 492 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 12 490 84.96 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Tlie_0920 0bfa1a0a607fa67e5e7a89741f3fcac0 492 SUPERFAMILY SSF51412 8 481 1.31E-123 T 14-10-2018 Tlie_0920 0bfa1a0a607fa67e5e7a89741f3fcac0 492 Pfam PF00571 CBS domain 154 207 4.7E-8 T 14-10-2018 IPR000644 CBS domain Tlie_0920 0bfa1a0a607fa67e5e7a89741f3fcac0 492 Pfam PF00571 CBS domain 100 144 7.9E-12 T 14-10-2018 IPR000644 CBS domain Tlie_0920 0bfa1a0a607fa67e5e7a89741f3fcac0 492 PIRSF PIRSF000130 1 492 2.3E-208 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Tlie_0920 0bfa1a0a607fa67e5e7a89741f3fcac0 492 SUPERFAMILY SSF54631 70 207 1.09E-32 T 14-10-2018 Tlie_0920 0bfa1a0a607fa67e5e7a89741f3fcac0 492 SMART SM00116 161 209 2.2E-6 T 14-10-2018 IPR000644 CBS domain Tlie_0920 0bfa1a0a607fa67e5e7a89741f3fcac0 492 SMART SM00116 100 148 2.9E-10 T 14-10-2018 IPR000644 CBS domain Tlie_0920 0bfa1a0a607fa67e5e7a89741f3fcac0 492 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 12 477 4.8E-163 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Tlie_0151 02f2e984217c41e0750e767e3ee83b3f 574 SUPERFAMILY SSF52540 240 418 1.36E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0151 02f2e984217c41e0750e767e3ee83b3f 574 Pfam PF09818 Predicted ATPase of the ABC class 4 444 6.3E-194 T 14-10-2018 IPR019195 ABC transporter, ATPase, putative Tlie_1117 ed3b500bcac959e94f46c28ac21fe0e2 313 Gene3D G3DSA:3.40.50.970 80 309 7.7E-67 T 14-10-2018 Tlie_1117 ed3b500bcac959e94f46c28ac21fe0e2 313 SUPERFAMILY SSF52518 14 309 6.37E-77 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tlie_1117 ed3b500bcac959e94f46c28ac21fe0e2 313 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 48 215 1.4E-24 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tlie_1867 cb792452ffc906291b6dda16faf6aa29 392 Pfam PF02706 Chain length determinant protein 22 76 2.8E-8 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Tlie_1867 cb792452ffc906291b6dda16faf6aa29 392 Pfam PF13807 G-rich domain on putative tyrosine kinase 291 360 1.9E-8 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain Tlie_1759 674228035cbc37361bc67aceb54142e3 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 23 400 5.2E-8 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tlie_1178 941be15694f48013b0ea63f342f27ca9 182 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 124 177 5.3E-26 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal Tlie_1178 941be15694f48013b0ea63f342f27ca9 182 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 181 22.085 T 14-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid Tlie_1178 941be15694f48013b0ea63f342f27ca9 182 Gene3D G3DSA:3.30.160.100 1 95 6.2E-22 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like Tlie_1178 941be15694f48013b0ea63f342f27ca9 182 Gene3D G3DSA:3.30.505.50 135 180 1.9E-21 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily Tlie_1178 941be15694f48013b0ea63f342f27ca9 182 SUPERFAMILY SSF69754 1 100 2.49E-23 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like Tlie_1178 941be15694f48013b0ea63f342f27ca9 182 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 91 6.3E-19 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Tlie_1178 941be15694f48013b0ea63f342f27ca9 182 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 5.0E-20 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Tlie_0845 a83fd34fdea8281d2cf74da2f78cd112 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 370 386 9.6E-21 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tlie_0845 a83fd34fdea8281d2cf74da2f78cd112 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 421 438 9.6E-21 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tlie_0845 a83fd34fdea8281d2cf74da2f78cd112 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 320 332 9.6E-21 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tlie_0845 a83fd34fdea8281d2cf74da2f78cd112 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 224 238 9.6E-21 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tlie_0845 a83fd34fdea8281d2cf74da2f78cd112 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 254 264 9.6E-21 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tlie_0845 a83fd34fdea8281d2cf74da2f78cd112 440 SUPERFAMILY SSF53335 147 438 1.92E-51 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_0845 a83fd34fdea8281d2cf74da2f78cd112 440 SUPERFAMILY SSF48013 13 150 2.13E-12 T 14-10-2018 IPR035926 NusB-like superfamily Tlie_0845 a83fd34fdea8281d2cf74da2f78cd112 440 Pfam PF01029 NusB family 15 123 1.6E-10 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Tlie_0845 a83fd34fdea8281d2cf74da2f78cd112 440 Gene3D G3DSA:3.40.50.150 144 438 4.2E-56 T 14-10-2018 Tlie_0845 a83fd34fdea8281d2cf74da2f78cd112 440 Gene3D G3DSA:1.10.940.10 4 137 1.5E-16 T 14-10-2018 IPR035926 NusB-like superfamily Tlie_0845 a83fd34fdea8281d2cf74da2f78cd112 440 Pfam PF01189 16S rRNA methyltransferase RsmB/F 249 437 1.1E-33 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Tlie_0819 855fc6a3d066a3d08820b01f26db3fb7 359 Gene3D G3DSA:1.10.3210.10 180 349 4.2E-16 T 14-10-2018 Tlie_0819 855fc6a3d066a3d08820b01f26db3fb7 359 SUPERFAMILY SSF109604 176 329 1.47E-20 T 14-10-2018 Tlie_0819 855fc6a3d066a3d08820b01f26db3fb7 359 SMART SM00471 194 330 8.4E-12 T 14-10-2018 IPR003607 HD/PDEase domain Tlie_0819 855fc6a3d066a3d08820b01f26db3fb7 359 TIGRFAM TIGR00277 HDIG: HDIG domain 195 278 4.0E-8 T 14-10-2018 IPR006675 HDIG domain Tlie_0819 855fc6a3d066a3d08820b01f26db3fb7 359 Pfam PF01966 HD domain 199 319 2.2E-11 T 14-10-2018 IPR006674 HD domain Tlie_1256 ade8795f1e370e1a9e3ec8df0235c196 329 Gene3D G3DSA:3.20.20.70 10 244 3.3E-56 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1256 ade8795f1e370e1a9e3ec8df0235c196 329 Pfam PF01207 Dihydrouridine synthase (Dus) 16 316 9.8E-52 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Tlie_1256 ade8795f1e370e1a9e3ec8df0235c196 329 SUPERFAMILY SSF51395 12 320 1.88E-54 T 14-10-2018 Tlie_1256 ade8795f1e370e1a9e3ec8df0235c196 329 PIRSF PIRSF006621 7 327 2.5E-55 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Tlie_1253 0f16426cc543534cd1dbbd599936197b 97 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 2 93 5.6E-21 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Tlie_1253 0f16426cc543534cd1dbbd599936197b 97 Gene3D G3DSA:1.10.20.60 1 92 8.3E-18 T 14-10-2018 Tlie_1253 0f16426cc543534cd1dbbd599936197b 97 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 1 94 17.316 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Tlie_1253 0f16426cc543534cd1dbbd599936197b 97 SUPERFAMILY SSF141000 1 92 1.57E-20 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 Tlie_1253 0f16426cc543534cd1dbbd599936197b 97 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 89 1.4E-10 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Tlie_0893 2e26afe86c48e1f1619e6101349e38aa 521 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0893 2e26afe86c48e1f1619e6101349e38aa 521 Pfam PF00005 ABC transporter 277 429 4.0E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0893 2e26afe86c48e1f1619e6101349e38aa 521 Gene3D G3DSA:3.40.50.300 4 242 3.2E-57 T 14-10-2018 Tlie_0893 2e26afe86c48e1f1619e6101349e38aa 521 SUPERFAMILY SSF52540 259 486 8.76E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0893 2e26afe86c48e1f1619e6101349e38aa 521 SMART SM00382 33 220 2.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0893 2e26afe86c48e1f1619e6101349e38aa 521 SUPERFAMILY SSF52540 7 230 1.94E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0893 2e26afe86c48e1f1619e6101349e38aa 521 Pfam PF00005 ABC transporter 25 172 1.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0893 2e26afe86c48e1f1619e6101349e38aa 521 Gene3D G3DSA:3.40.50.300 256 499 1.1E-37 T 14-10-2018 Tlie_1193 84f49abe4a525f2ebd1abeec6d2c3039 428 PIRSF PIRSF011588 1 428 2.2E-187 T 14-10-2018 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta GO:0050485|GO:0055114 Tlie_1193 84f49abe4a525f2ebd1abeec6d2c3039 428 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 2 425 2.8E-202 T 14-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 Tlie_0598 47648cadc855d1c30cd75f53912ad174 65 Gene3D G3DSA:2.20.28.30 8 53 1.1E-7 T 14-10-2018 Tlie_1540 92a3e09ae1feedba1eb0ae2763be9d87 429 PIRSF PIRSF006066 1 429 6.2E-142 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_1540 92a3e09ae1feedba1eb0ae2763be9d87 429 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 424 6.5E-123 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_1540 92a3e09ae1feedba1eb0ae2763be9d87 429 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 417 4.7E-113 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tlie_1216 9f0a098645ffdf38d49c2859cc8a0d8a 397 SUPERFAMILY SSF53187 3 394 1.01E-88 T 14-10-2018 Tlie_1216 9f0a098645ffdf38d49c2859cc8a0d8a 397 PIRSF PIRSF005962 1 397 3.3E-134 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Tlie_1216 9f0a098645ffdf38d49c2859cc8a0d8a 397 Pfam PF01546 Peptidase family M20/M25/M40 77 387 4.6E-36 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tlie_1216 9f0a098645ffdf38d49c2859cc8a0d8a 397 Gene3D G3DSA:3.40.630.10 17 378 7.9E-145 T 14-10-2018 Tlie_1216 9f0a098645ffdf38d49c2859cc8a0d8a 397 SUPERFAMILY SSF55031 189 301 5.1E-31 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tlie_1216 9f0a098645ffdf38d49c2859cc8a0d8a 397 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 381 5.2E-126 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Tlie_1216 9f0a098645ffdf38d49c2859cc8a0d8a 397 Gene3D G3DSA:3.30.70.360 187 301 7.9E-145 T 14-10-2018 Tlie_1216 9f0a098645ffdf38d49c2859cc8a0d8a 397 Pfam PF07687 Peptidase dimerisation domain 191 283 8.0E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Tlie_0672 648703c069ab8c68677754866993d5a5 127 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.943 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0672 648703c069ab8c68677754866993d5a5 127 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 3.7E-56 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0672 648703c069ab8c68677754866993d5a5 127 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0672 648703c069ab8c68677754866993d5a5 127 PIRSF PIRSF002134 1 124 1.6E-46 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0672 648703c069ab8c68677754866993d5a5 127 Pfam PF00416 Ribosomal protein S13/S18 3 109 3.4E-34 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0672 648703c069ab8c68677754866993d5a5 127 Gene3D G3DSA:1.10.8.50 1 72 1.1E-32 T 14-10-2018 Tlie_0672 648703c069ab8c68677754866993d5a5 127 Gene3D G3DSA:4.10.910.10 73 126 7.9E-27 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0672 648703c069ab8c68677754866993d5a5 127 SUPERFAMILY SSF46946 2 122 1.01E-49 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Tlie_1003 cfa9eb62e6d766dd71c7fe059fddb7ad 93 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 91 27.056 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1003 cfa9eb62e6d766dd71c7fe059fddb7ad 93 SUPERFAMILY SSF110324 10 86 7.85E-33 T 14-10-2018 Tlie_1003 cfa9eb62e6d766dd71c7fe059fddb7ad 93 Gene3D G3DSA:2.40.50.100 28 92 4.0E-29 T 14-10-2018 Tlie_1003 cfa9eb62e6d766dd71c7fe059fddb7ad 93 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 87 4.4E-38 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1003 cfa9eb62e6d766dd71c7fe059fddb7ad 93 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 1.0E-13 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1003 cfa9eb62e6d766dd71c7fe059fddb7ad 93 PRINTS PR00063 Ribosomal protein L27 signature 37 61 6.0E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1003 cfa9eb62e6d766dd71c7fe059fddb7ad 93 PRINTS PR00063 Ribosomal protein L27 signature 62 86 6.0E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1003 cfa9eb62e6d766dd71c7fe059fddb7ad 93 PRINTS PR00063 Ribosomal protein L27 signature 12 36 6.0E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1003 cfa9eb62e6d766dd71c7fe059fddb7ad 93 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_1003 cfa9eb62e6d766dd71c7fe059fddb7ad 93 Pfam PF01016 Ribosomal L27 protein 10 88 3.6E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1667 4d68e9bb6801bb6d197ae9f2cec2598f 628 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 15 593 4.1E-242 T 14-10-2018 IPR004814 Oligopeptide transporter OPT Tlie_1667 4d68e9bb6801bb6d197ae9f2cec2598f 628 Pfam PF03169 OPT oligopeptide transporter protein 15 591 1.7E-103 T 14-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 Tlie_1667 4d68e9bb6801bb6d197ae9f2cec2598f 628 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 7 594 2.4E-115 T 14-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 Tlie_1399 7a977e79342ead48fc1095053ba599e6 294 SUPERFAMILY SSF109998 35 176 6.67E-11 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily Tlie_1399 7a977e79342ead48fc1095053ba599e6 294 Pfam PF13616 PPIC-type PPIASE domain 135 240 8.5E-26 T 14-10-2018 Tlie_1399 7a977e79342ead48fc1095053ba599e6 294 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 178 199 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 Tlie_1399 7a977e79342ead48fc1095053ba599e6 294 SUPERFAMILY SSF54534 141 239 8.5E-30 T 14-10-2018 Tlie_1399 7a977e79342ead48fc1095053ba599e6 294 Gene3D G3DSA:3.10.50.40 145 246 1.4E-30 T 14-10-2018 Tlie_0567 5bd9b9ce99c0fcd7b642ad2fb50ebd79 387 Gene3D G3DSA:3.40.50.2000 209 387 1.4E-20 T 14-10-2018 Tlie_0567 5bd9b9ce99c0fcd7b642ad2fb50ebd79 387 SUPERFAMILY SSF53756 46 385 3.77E-42 T 14-10-2018 Tlie_0567 5bd9b9ce99c0fcd7b642ad2fb50ebd79 387 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 146 358 5.8E-13 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Tlie_0567 5bd9b9ce99c0fcd7b642ad2fb50ebd79 387 Gene3D G3DSA:3.40.50.2000 40 200 1.2E-13 T 14-10-2018 Tlie_0554 5182169ab6c95359d7ec9de2465fa8d5 372 SUPERFAMILY SSF53756 3 347 2.3E-13 T 14-10-2018 Tlie_0554 5182169ab6c95359d7ec9de2465fa8d5 372 Pfam PF02684 Lipid-A-disaccharide synthetase 3 341 1.8E-70 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Tlie_0554 5182169ab6c95359d7ec9de2465fa8d5 372 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 2 352 1.2E-61 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Tlie_0272 41a89c46b59a5c3af11ef12212a54729 174 PRINTS PR01398 Isochorismatase signature 138 156 2.4E-8 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 Tlie_0272 41a89c46b59a5c3af11ef12212a54729 174 PRINTS PR01398 Isochorismatase signature 37 54 2.4E-8 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 Tlie_0272 41a89c46b59a5c3af11ef12212a54729 174 PRINTS PR01398 Isochorismatase signature 82 104 2.4E-8 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 Tlie_0272 41a89c46b59a5c3af11ef12212a54729 174 Gene3D G3DSA:3.40.50.850 1 173 5.7E-57 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Tlie_0272 41a89c46b59a5c3af11ef12212a54729 174 SUPERFAMILY SSF52499 3 171 9.68E-54 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Tlie_0272 41a89c46b59a5c3af11ef12212a54729 174 Pfam PF00857 Isochorismatase family 4 172 5.2E-43 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Tlie_1055 e7c4792d91add87523aa8e277444c49a 428 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4 416 2.2E-170 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_1055 e7c4792d91add87523aa8e277444c49a 428 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 2 418 43.121 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tlie_1055 e7c4792d91add87523aa8e277444c49a 428 Gene3D G3DSA:3.65.10.10 7 415 2.6E-164 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Tlie_1055 e7c4792d91add87523aa8e277444c49a 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 408 6.0E-108 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Tlie_1055 e7c4792d91add87523aa8e277444c49a 428 Gene3D G3DSA:3.65.10.10 22 230 2.6E-164 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Tlie_1055 e7c4792d91add87523aa8e277444c49a 428 SUPERFAMILY SSF55205 3 417 8.37E-133 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Tlie_1872 8793998da727c9425132405a232ae132 208 SUPERFAMILY SSF54211 7 131 1.93E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tlie_1872 8793998da727c9425132405a232ae132 208 Gene3D G3DSA:3.30.230.30 1 135 1.0E-45 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily Tlie_1872 8793998da727c9425132405a232ae132 208 Pfam PF01205 Uncharacterized protein family UPF0029 21 126 2.8E-27 T 14-10-2018 IPR001498 Impact, N-terminal Tlie_1872 8793998da727c9425132405a232ae132 208 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 81 110 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site Tlie_0274 11277621a75b3c6082e501313694fe71 792 Pfam PF02687 FtsX-like permease family 298 392 3.4E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Tlie_0274 11277621a75b3c6082e501313694fe71 792 Pfam PF02687 FtsX-like permease family 691 775 1.0E-5 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Tlie_0274 11277621a75b3c6082e501313694fe71 792 Pfam PF12704 MacB-like periplasmic core domain 20 237 6.6E-7 T 14-10-2018 IPR025857 MacB-like periplasmic core domain Tlie_1633 f869b4dd2be18faff10714479c15ac44 308 Gene3D G3DSA:1.10.4080.10 3 281 2.5E-67 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Tlie_1633 f869b4dd2be18faff10714479c15ac44 308 Pfam PF03747 ADP-ribosylglycohydrolase 14 265 1.3E-48 T 14-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 Tlie_1633 f869b4dd2be18faff10714479c15ac44 308 SUPERFAMILY SSF101478 9 304 7.06E-60 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Tlie_1899 4d27e508f01c549b6c03ca12b0a86fa2 347 SUPERFAMILY SSF51569 3 336 6.23E-104 T 14-10-2018 Tlie_1899 4d27e508f01c549b6c03ca12b0a86fa2 347 Pfam PF00793 DAHP synthetase I family 86 322 5.5E-77 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tlie_1899 4d27e508f01c549b6c03ca12b0a86fa2 347 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 72 327 2.3E-119 T 14-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Tlie_1899 4d27e508f01c549b6c03ca12b0a86fa2 347 Gene3D G3DSA:3.20.20.70 58 329 2.3E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0241 09cd7843430566d20cdb16668c758d27 246 Pfam PF01867 CRISPR associated protein Cas1 11 159 6.3E-13 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Tlie_0241 09cd7843430566d20cdb16668c758d27 246 Gene3D G3DSA:3.100.10.20 2 81 1.6E-10 T 14-10-2018 Tlie_1567 d3f6d215cdabe78cd0804ff7efadcee3 89 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 2 82 1.1E-21 T 14-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein Tlie_1567 d3f6d215cdabe78cd0804ff7efadcee3 89 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 2 80 2.0E-8 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 Tlie_0366 d6e2d66f938133b14ec134e2fa29c94b 423 PRINTS PR00758 Arsenical pump membrane protein signature 361 386 9.4E-11 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Tlie_0366 d6e2d66f938133b14ec134e2fa29c94b 423 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 9.4E-11 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Tlie_0366 d6e2d66f938133b14ec134e2fa29c94b 423 PRINTS PR00758 Arsenical pump membrane protein signature 394 418 9.4E-11 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Tlie_0366 d6e2d66f938133b14ec134e2fa29c94b 423 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 9.4E-11 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Tlie_0366 d6e2d66f938133b14ec134e2fa29c94b 423 PRINTS PR00758 Arsenical pump membrane protein signature 274 298 9.4E-11 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Tlie_0366 d6e2d66f938133b14ec134e2fa29c94b 423 Pfam PF03600 Citrate transporter 16 365 7.3E-49 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Tlie_0287 08377a75b44375274f2e53f4bb65c12b 76 SMART SM00966 6 51 1.2E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tlie_0287 08377a75b44375274f2e53f4bb65c12b 76 Gene3D G3DSA:2.10.260.10 1 76 2.4E-21 T 14-10-2018 Tlie_0287 08377a75b44375274f2e53f4bb65c12b 76 SUPERFAMILY SSF89447 1 69 2.44E-13 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tlie_0287 08377a75b44375274f2e53f4bb65c12b 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 44 1.6E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tlie_0027 63980fd525e71dc6380c2be45e5684f4 350 Gene3D G3DSA:3.40.190.170 26 338 4.1E-77 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Tlie_0027 63980fd525e71dc6380c2be45e5684f4 350 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 314 2.0E-36 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Tlie_1883 8f19683d8f09c3379632596026fdb517 385 PIRSF PIRSF005572 1 385 1.6E-48 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Tlie_1883 8f19683d8f09c3379632596026fdb517 385 Pfam PF00266 Aminotransferase class-V 3 376 5.2E-78 T 14-10-2018 IPR000192 Aminotransferase class V domain Tlie_1883 8f19683d8f09c3379632596026fdb517 385 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 3 383 7.5E-127 T 14-10-2018 IPR010969 Cysteine desulfurase-related, unknown function Tlie_1883 8f19683d8f09c3379632596026fdb517 385 SUPERFAMILY SSF53383 3 383 4.3E-89 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1883 8f19683d8f09c3379632596026fdb517 385 Gene3D G3DSA:3.90.1150.10 3 378 3.0E-105 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1883 8f19683d8f09c3379632596026fdb517 385 Gene3D G3DSA:3.40.640.10 17 274 3.0E-105 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0679 967f1bc33fe6990efc90aa4d6c84c882 270 Pfam PF02361 Cobalt transport protein 17 236 4.5E-42 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Tlie_0388 d1aec3e89903cfeaf850b3171043b359 303 SUPERFAMILY SSF103481 187 292 3.14E-14 T 14-10-2018 Tlie_0388 d1aec3e89903cfeaf850b3171043b359 303 SUPERFAMILY SSF103481 49 142 3.53E-8 T 14-10-2018 Tlie_0388 d1aec3e89903cfeaf850b3171043b359 303 Pfam PF00892 EamA-like transporter family 151 287 1.1E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tlie_0388 d1aec3e89903cfeaf850b3171043b359 303 Pfam PF00892 EamA-like transporter family 5 139 1.2E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tlie_1728 ca77cb21b325178a6ea388d4bb2568d6 399 Pfam PF01546 Peptidase family M20/M25/M40 74 389 6.7E-27 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tlie_1728 ca77cb21b325178a6ea388d4bb2568d6 399 SUPERFAMILY SSF55031 182 278 1.64E-13 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tlie_1728 ca77cb21b325178a6ea388d4bb2568d6 399 TIGRFAM TIGR03526 selenium_YgeY: putative selenium metabolism hydrolase 3 397 2.3E-219 T 14-10-2018 IPR017706 Peptidase M20/DapE, YgeY Tlie_1728 ca77cb21b325178a6ea388d4bb2568d6 399 Pfam PF07687 Peptidase dimerisation domain 179 278 7.1E-16 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Tlie_1728 ca77cb21b325178a6ea388d4bb2568d6 399 Gene3D G3DSA:3.40.630.10 21 384 3.0E-70 T 14-10-2018 Tlie_1728 ca77cb21b325178a6ea388d4bb2568d6 399 Gene3D G3DSA:3.30.70.360 182 296 3.0E-70 T 14-10-2018 Tlie_1728 ca77cb21b325178a6ea388d4bb2568d6 399 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 72 81 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Tlie_1728 ca77cb21b325178a6ea388d4bb2568d6 399 SUPERFAMILY SSF53187 4 391 3.52E-57 T 14-10-2018 Tlie_0953 e02449426ab99aafdfe477ccdfb72bc9 94 Gene3D G3DSA:1.10.10.1100 1 70 4.7E-22 T 14-10-2018 Tlie_0953 e02449426ab99aafdfe477ccdfb72bc9 94 Pfam PF04324 BFD-like [2Fe-2S] binding domain 9 54 3.6E-13 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Tlie_0049 7021978066951eb8cb86c0c0726980ca 52 Pfam PF00301 Rubredoxin 3 49 1.1E-25 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 Tlie_0049 7021978066951eb8cb86c0c0726980ca 52 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 14-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 Tlie_0049 7021978066951eb8cb86c0c0726980ca 52 PIRSF PIRSF000071 1 52 9.6E-29 T 14-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 Tlie_0049 7021978066951eb8cb86c0c0726980ca 52 SUPERFAMILY SSF57802 1 50 3.7E-24 T 14-10-2018 Tlie_0049 7021978066951eb8cb86c0c0726980ca 52 PRINTS PR00163 Rubredoxin signature 33 49 1.2E-12 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 Tlie_0049 7021978066951eb8cb86c0c0726980ca 52 PRINTS PR00163 Rubredoxin signature 3 19 1.2E-12 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 Tlie_0049 7021978066951eb8cb86c0c0726980ca 52 Gene3D G3DSA:2.20.28.10 1 52 7.3E-29 T 14-10-2018 Tlie_0782 0f94128ceaee3e2222ccf59895247aa8 293 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 2 287 1.2E-154 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0782 0f94128ceaee3e2222ccf59895247aa8 293 Gene3D G3DSA:3.30.930.10 1 204 4.1E-109 T 14-10-2018 Tlie_0782 0f94128ceaee3e2222ccf59895247aa8 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 2.8E-65 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0782 0f94128ceaee3e2222ccf59895247aa8 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 2.8E-65 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0782 0f94128ceaee3e2222ccf59895247aa8 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 2.8E-65 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0782 0f94128ceaee3e2222ccf59895247aa8 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 2.8E-65 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0782 0f94128ceaee3e2222ccf59895247aa8 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 2.8E-65 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0782 0f94128ceaee3e2222ccf59895247aa8 293 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 2.8E-65 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0782 0f94128ceaee3e2222ccf59895247aa8 293 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 59.434 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0782 0f94128ceaee3e2222ccf59895247aa8 293 SUPERFAMILY SSF55681 1 280 7.7E-134 T 14-10-2018 Tlie_0782 0f94128ceaee3e2222ccf59895247aa8 293 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 279 5.2E-154 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0782 0f94128ceaee3e2222ccf59895247aa8 293 Gene3D G3DSA:1.20.58.180 205 285 1.2E-36 T 14-10-2018 Tlie_1661 ec8b8f1edad1eca2c02d5c2f8854288f 410 Gene3D G3DSA:3.90.1150.10 22 401 3.5E-115 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1661 ec8b8f1edad1eca2c02d5c2f8854288f 410 SUPERFAMILY SSF53383 9 405 3.03E-92 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_1661 ec8b8f1edad1eca2c02d5c2f8854288f 410 Gene3D G3DSA:3.40.640.10 69 292 3.5E-115 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_1661 ec8b8f1edad1eca2c02d5c2f8854288f 410 Pfam PF00155 Aminotransferase class I and II 35 397 1.6E-34 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tlie_1482 076b20d82d94e2ef4d264be0dd786311 147 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 8 136 6.7E-37 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain Tlie_1482 076b20d82d94e2ef4d264be0dd786311 147 Gene3D G3DSA:2.40.30.70 1 139 6.2E-40 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily Tlie_1482 076b20d82d94e2ef4d264be0dd786311 147 SUPERFAMILY SSF118196 8 139 1.7E-37 T 14-10-2018 IPR036413 YaeB-like superfamily Tlie_1482 076b20d82d94e2ef4d264be0dd786311 147 Pfam PF01980 Uncharacterised protein family UPF0066 28 135 4.0E-29 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain Tlie_1482 076b20d82d94e2ef4d264be0dd786311 147 ProSitePatterns PS01318 TsaA-like domain signature. 88 99 - T 14-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site Tlie_1016 d1ff1c999261a4aa9c7bd1d91968d7d3 451 Gene3D G3DSA:3.30.2290.10 6 207 1.9E-14 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Tlie_1016 d1ff1c999261a4aa9c7bd1d91968d7d3 451 Pfam PF01523 Putative modulator of DNA gyrase 20 302 1.1E-64 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Tlie_1016 d1ff1c999261a4aa9c7bd1d91968d7d3 451 SUPERFAMILY SSF111283 6 448 1.57E-108 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Tlie_1016 d1ff1c999261a4aa9c7bd1d91968d7d3 451 PIRSF PIRSF004919 1 450 7.6E-124 T 14-10-2018 IPR025502 TldD Tlie_0869 2ec9abba102c4ccc8edf249c43320dbe 336 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 2 335 41.008 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Tlie_0869 2ec9abba102c4ccc8edf249c43320dbe 336 Gene3D G3DSA:3.40.50.10470 138 336 6.6E-69 T 14-10-2018 Tlie_0869 2ec9abba102c4ccc8edf249c43320dbe 336 Gene3D G3DSA:1.20.120.420 3 136 1.3E-42 T 14-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Tlie_0869 2ec9abba102c4ccc8edf249c43320dbe 336 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 5 324 7.1E-132 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Tlie_0869 2ec9abba102c4ccc8edf249c43320dbe 336 SUPERFAMILY SSF100950 5 332 2.51E-116 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Tlie_0869 2ec9abba102c4ccc8edf249c43320dbe 336 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 32 325 8.7E-115 T 14-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Tlie_0869 2ec9abba102c4ccc8edf249c43320dbe 336 Pfam PF01008 Initiation factor 2 subunit family 47 325 1.8E-79 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 Tlie_0088 203ae6f062b30a882ee975d51e321074 203 SUPERFAMILY SSF158791 137 189 8.5E-6 T 14-10-2018 Tlie_1847 175e33e72e66530c625ff92b1f855851 245 SMART SM00062 34 245 5.6E-38 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Tlie_1847 175e33e72e66530c625ff92b1f855851 245 Gene3D G3DSA:3.40.190.10 123 210 4.3E-50 T 14-10-2018 Tlie_1847 175e33e72e66530c625ff92b1f855851 245 Gene3D G3DSA:3.40.190.10 26 241 4.3E-50 T 14-10-2018 Tlie_1847 175e33e72e66530c625ff92b1f855851 245 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 55 68 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site Tlie_1847 175e33e72e66530c625ff92b1f855851 245 SMART SM00079 34 245 0.0095 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Tlie_1847 175e33e72e66530c625ff92b1f855851 245 SUPERFAMILY SSF53850 1 244 4.82E-55 T 14-10-2018 Tlie_1847 175e33e72e66530c625ff92b1f855851 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 244 9.0E-45 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Tlie_0172 4434965325c5b7f3b6db96e0907c9fb1 212 Gene3D G3DSA:3.20.20.70 1 209 5.0E-68 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0172 4434965325c5b7f3b6db96e0907c9fb1 212 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 7 208 27.008 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tlie_0172 4434965325c5b7f3b6db96e0907c9fb1 212 Pfam PF02581 Thiamine monophosphate synthase 11 190 5.0E-61 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tlie_0172 4434965325c5b7f3b6db96e0907c9fb1 212 SUPERFAMILY SSF51391 6 208 1.44E-63 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tlie_0172 4434965325c5b7f3b6db96e0907c9fb1 212 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 9 202 1.0E-60 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tlie_1739 5eedb83cc9dc14eeb76335aeb6f7fcae 229 SUPERFAMILY SSF161098 15 226 1.19E-32 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_1739 5eedb83cc9dc14eeb76335aeb6f7fcae 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 228 1.6E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tlie_1739 5eedb83cc9dc14eeb76335aeb6f7fcae 229 Gene3D G3DSA:1.10.3720.10 4 229 4.6E-35 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_0435 b769abc0026b2d9f7fc2e455b0199910 456 Pfam PF02321 Outer membrane efflux protein 40 239 2.9E-34 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tlie_0435 b769abc0026b2d9f7fc2e455b0199910 456 Pfam PF02321 Outer membrane efflux protein 269 447 3.2E-28 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tlie_0435 b769abc0026b2d9f7fc2e455b0199910 456 SUPERFAMILY SSF56954 9 448 1.7E-75 T 14-10-2018 Tlie_0435 b769abc0026b2d9f7fc2e455b0199910 456 PIRSF PIRSF001892 21 455 3.7E-62 T 14-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 Tlie_0435 b769abc0026b2d9f7fc2e455b0199910 456 Gene3D G3DSA:1.20.1600.10 31 452 6.6E-83 T 14-10-2018 Tlie_0162 568cd4b4e676f3e9e60b72c054b81ba8 367 Gene3D G3DSA:3.40.640.10 39 265 5.9E-121 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0162 568cd4b4e676f3e9e60b72c054b81ba8 367 Pfam PF00155 Aminotransferase class I and II 26 359 1.2E-53 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tlie_0162 568cd4b4e676f3e9e60b72c054b81ba8 367 SUPERFAMILY SSF53383 7 361 6.65E-86 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0162 568cd4b4e676f3e9e60b72c054b81ba8 367 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 9 360 5.6E-98 T 14-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 Tlie_0162 568cd4b4e676f3e9e60b72c054b81ba8 367 Gene3D G3DSA:3.90.1150.10 27 360 5.9E-121 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_0286 f748f95a57ee9351b3bf2d747f7c6b62 370 SUPERFAMILY SSF53383 26 363 1.36E-58 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0286 f748f95a57ee9351b3bf2d747f7c6b62 370 Gene3D G3DSA:3.90.1150.10 32 363 3.8E-63 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_0286 f748f95a57ee9351b3bf2d747f7c6b62 370 Gene3D G3DSA:3.40.640.10 44 272 3.8E-63 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0286 f748f95a57ee9351b3bf2d747f7c6b62 370 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 223 236 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Tlie_0286 f748f95a57ee9351b3bf2d747f7c6b62 370 Pfam PF00155 Aminotransferase class I and II 81 363 3.9E-35 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tlie_1841 115e7168118ffe18b51ddab7b9c6690d 213 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 4 196 8.8E-38 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Tlie_1841 115e7168118ffe18b51ddab7b9c6690d 213 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 2 202 33.291 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Tlie_1841 115e7168118ffe18b51ddab7b9c6690d 213 SUPERFAMILY SSF51366 3 200 2.51E-48 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tlie_1841 115e7168118ffe18b51ddab7b9c6690d 213 Gene3D G3DSA:3.20.20.70 1 205 8.9E-56 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1773 b392bea6d484ccc57d06b0df6c612db9 287 SUPERFAMILY SSF52402 152 287 3.59E-30 T 14-10-2018 Tlie_1773 b392bea6d484ccc57d06b0df6c612db9 287 SUPERFAMILY SSF52402 2 133 4.19E-25 T 14-10-2018 Tlie_1773 b392bea6d484ccc57d06b0df6c612db9 287 Pfam PF00582 Universal stress protein family 152 287 1.3E-31 T 14-10-2018 IPR006016 UspA Tlie_1773 b392bea6d484ccc57d06b0df6c612db9 287 Pfam PF00582 Universal stress protein family 1 132 1.2E-20 T 14-10-2018 IPR006016 UspA Tlie_1773 b392bea6d484ccc57d06b0df6c612db9 287 PRINTS PR01438 Universal stress protein signature 247 259 5.0E-15 T 14-10-2018 IPR006015 Universal stress protein A Tlie_1773 b392bea6d484ccc57d06b0df6c612db9 287 PRINTS PR01438 Universal stress protein signature 152 170 5.0E-15 T 14-10-2018 IPR006015 Universal stress protein A Tlie_1773 b392bea6d484ccc57d06b0df6c612db9 287 PRINTS PR01438 Universal stress protein signature 265 287 5.0E-15 T 14-10-2018 IPR006015 Universal stress protein A Tlie_1773 b392bea6d484ccc57d06b0df6c612db9 287 Gene3D G3DSA:3.40.50.620 149 287 7.5E-32 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1773 b392bea6d484ccc57d06b0df6c612db9 287 Gene3D G3DSA:3.40.50.620 1 133 3.2E-26 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_0169 ca6b1123b90dfcf9c7478eb28733ad8a 320 SMART SM00849 29 232 3.5E-29 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tlie_0169 ca6b1123b90dfcf9c7478eb28733ad8a 320 Pfam PF00753 Metallo-beta-lactamase superfamily 33 232 3.4E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tlie_0169 ca6b1123b90dfcf9c7478eb28733ad8a 320 SUPERFAMILY SSF56281 7 265 1.31E-37 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_0169 ca6b1123b90dfcf9c7478eb28733ad8a 320 Gene3D G3DSA:3.60.15.10 15 283 4.2E-51 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tlie_0703 1667bdb535ad3b96b4c54eb0d04fd8cc 313 SUPERFAMILY SSF52540 36 183 1.54E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0703 1667bdb535ad3b96b4c54eb0d04fd8cc 313 SUPERFAMILY SSF48019 191 304 9.35E-5 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Tlie_0703 1667bdb535ad3b96b4c54eb0d04fd8cc 313 Gene3D G3DSA:1.20.272.10 189 310 1.4E-10 T 14-10-2018 Tlie_0887 65c52e52a23f7a017dd73334d1aa15e4 297 Pfam PF00589 Phage integrase family 114 282 5.1E-49 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tlie_0887 65c52e52a23f7a017dd73334d1aa15e4 297 Gene3D G3DSA:1.10.443.10 112 291 2.1E-60 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tlie_0887 65c52e52a23f7a017dd73334d1aa15e4 297 SUPERFAMILY SSF56349 110 287 4.71E-53 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tlie_0887 65c52e52a23f7a017dd73334d1aa15e4 297 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 10 92 4.9E-15 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Tlie_0887 65c52e52a23f7a017dd73334d1aa15e4 297 Gene3D G3DSA:1.10.150.130 5 100 5.2E-21 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Tlie_0887 65c52e52a23f7a017dd73334d1aa15e4 297 SUPERFAMILY SSF47823 9 89 5.89E-15 T 14-10-2018 Tlie_0331 4f7bb54510cee97cf364fa02ad926bd5 90 Pfam PF04324 BFD-like [2Fe-2S] binding domain 11 67 1.4E-12 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Tlie_0331 4f7bb54510cee97cf364fa02ad926bd5 90 Gene3D G3DSA:1.10.10.1100 1 70 2.2E-19 T 14-10-2018 Tlie_1606 2582ec377b0bf6755dd1f180216cb78c 307 Gene3D G3DSA:3.60.110.10 1 280 3.9E-67 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tlie_1606 2582ec377b0bf6755dd1f180216cb78c 307 Pfam PF00795 Carbon-nitrogen hydrolase 6 256 4.2E-45 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Tlie_1606 2582ec377b0bf6755dd1f180216cb78c 307 SUPERFAMILY SSF56317 4 260 1.31E-61 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tlie_0289 4feea77391e04ab643ee9fab04350841 310 SMART SM00450 15 136 4.6E-16 T 14-10-2018 IPR001763 Rhodanese-like domain Tlie_0289 4feea77391e04ab643ee9fab04350841 310 SMART SM00450 162 290 9.4E-16 T 14-10-2018 IPR001763 Rhodanese-like domain Tlie_0289 4feea77391e04ab643ee9fab04350841 310 Gene3D G3DSA:3.40.250.10 10 144 3.5E-40 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Tlie_0289 4feea77391e04ab643ee9fab04350841 310 SUPERFAMILY SSF52821 156 301 4.85E-37 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Tlie_0289 4feea77391e04ab643ee9fab04350841 310 Pfam PF00581 Rhodanese-like domain 164 286 1.1E-14 T 14-10-2018 IPR001763 Rhodanese-like domain Tlie_0289 4feea77391e04ab643ee9fab04350841 310 Pfam PF00581 Rhodanese-like domain 18 133 1.3E-16 T 14-10-2018 IPR001763 Rhodanese-like domain Tlie_0289 4feea77391e04ab643ee9fab04350841 310 SUPERFAMILY SSF52821 13 189 2.62E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Tlie_0289 4feea77391e04ab643ee9fab04350841 310 ProSitePatterns PS00380 Rhodanese signature 1. 50 61 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Tlie_0289 4feea77391e04ab643ee9fab04350841 310 Gene3D G3DSA:3.40.250.10 152 303 9.2E-49 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Tlie_0302 da0c9061065e2b22d2e97e838fddfd95 355 Pfam PF13486 Reductive dehalogenase subunit 142 242 3.5E-8 T 14-10-2018 IPR028894 Reductive dehalogenase domain Tlie_0302 da0c9061065e2b22d2e97e838fddfd95 355 Gene3D G3DSA:3.30.70.20 239 345 4.3E-7 T 14-10-2018 Tlie_0302 da0c9061065e2b22d2e97e838fddfd95 355 Pfam PF12838 4Fe-4S dicluster domain 258 312 2.4E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_0302 da0c9061065e2b22d2e97e838fddfd95 355 SUPERFAMILY SSF54862 230 312 1.91E-10 T 14-10-2018 Tlie_0302 da0c9061065e2b22d2e97e838fddfd95 355 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 258 269 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_0712 1079e6a5f8f3a1a8635c514a1b4f6a0f 260 Pfam PF02096 60Kd inner membrane protein 26 237 1.8E-56 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Tlie_0712 1079e6a5f8f3a1a8635c514a1b4f6a0f 260 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 25 236 3.6E-59 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_1484 9a29132d769b6f34855cded798465760 111 Pfam PF02641 Uncharacterized ACR, COG1993 9 104 7.9E-45 T 14-10-2018 IPR003793 Domain of unknown function DUF190 Tlie_1484 9a29132d769b6f34855cded798465760 111 Gene3D G3DSA:3.30.70.120 4 111 6.1E-48 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tlie_1484 9a29132d769b6f34855cded798465760 111 SUPERFAMILY SSF54913 6 105 2.33E-38 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Tlie_0557 d78d0cb94606d16b6b1e2a6cb16376e5 753 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 16 358 29.456 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Tlie_0557 d78d0cb94606d16b6b1e2a6cb16376e5 753 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 30 326 7.3E-58 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Tlie_0557 d78d0cb94606d16b6b1e2a6cb16376e5 753 SUPERFAMILY SSF53756 489 718 1.4E-9 T 14-10-2018 Tlie_0557 d78d0cb94606d16b6b1e2a6cb16376e5 753 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 23 354 1.8E-84 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Tlie_0557 d78d0cb94606d16b6b1e2a6cb16376e5 753 SUPERFAMILY SSF52540 54 209 9.02E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0024 8bbe892e94a6fc306349d47035d3ffef 617 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 88 7.9E-9 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Tlie_0024 8bbe892e94a6fc306349d47035d3ffef 617 SUPERFAMILY SSF54292 8 98 1.7E-17 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tlie_0024 8bbe892e94a6fc306349d47035d3ffef 617 Gene3D G3DSA:3.30.420.480 200 381 3.7E-40 T 14-10-2018 Tlie_0024 8bbe892e94a6fc306349d47035d3ffef 617 Gene3D G3DSA:3.10.20.30 5 101 8.1E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Tlie_0024 8bbe892e94a6fc306349d47035d3ffef 617 Pfam PF14574 Domain of unknown function (DUF4445) 202 612 8.8E-122 T 14-10-2018 IPR027980 Protein of unknown function DUF4445 Tlie_1133 a7153f5376b60b145734c3788ddddc2c 264 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 246 4.5E-68 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Tlie_1133 a7153f5376b60b145734c3788ddddc2c 264 Gene3D G3DSA:3.40.1390.30 8 239 2.4E-66 T 14-10-2018 Tlie_1133 a7153f5376b60b145734c3788ddddc2c 264 Gene3D G3DSA:3.40.1390.30 103 227 2.4E-66 T 14-10-2018 Tlie_1133 a7153f5376b60b145734c3788ddddc2c 264 SUPERFAMILY SSF102705 5 250 4.84E-68 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Tlie_1133 a7153f5376b60b145734c3788ddddc2c 264 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 6 254 4.2E-52 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Tlie_1705 c295935573a15de8dab17021f0efc9f7 290 Gene3D G3DSA:3.20.10.10 126 287 1.8E-55 T 14-10-2018 Tlie_1705 c295935573a15de8dab17021f0efc9f7 290 SUPERFAMILY SSF56752 2 284 4.19E-92 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Tlie_1705 c295935573a15de8dab17021f0efc9f7 290 ProSitePatterns PS00770 Aminotransferases class-IV signature. 184 213 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Tlie_1705 c295935573a15de8dab17021f0efc9f7 290 Gene3D G3DSA:3.30.470.10 2 125 2.2E-47 T 14-10-2018 Tlie_1705 c295935573a15de8dab17021f0efc9f7 290 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 5 286 8.9E-106 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 Tlie_1705 c295935573a15de8dab17021f0efc9f7 290 Pfam PF01063 Amino-transferase class IV 30 258 1.1E-54 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Tlie_1369 e58bc87efbb04a510e5aa487feb4457b 401 Gene3D G3DSA:2.70.70.10 244 401 9.0E-54 T 14-10-2018 IPR011055 Duplicated hybrid motif Tlie_1369 e58bc87efbb04a510e5aa487feb4457b 401 Pfam PF01551 Peptidase family M23 301 395 7.6E-35 T 14-10-2018 IPR016047 Peptidase M23 Tlie_1369 e58bc87efbb04a510e5aa487feb4457b 401 SUPERFAMILY SSF51261 211 399 1.69E-60 T 14-10-2018 IPR011055 Duplicated hybrid motif Tlie_0134 9d5810df40cd0a0b359990dd89a5c508 145 Pfam PF03885 Protein of unknown function (DUF327) 45 143 3.4E-9 T 14-10-2018 IPR005585 Protein of unknown function DUF327 Tlie_0134 9d5810df40cd0a0b359990dd89a5c508 145 SUPERFAMILY SSF158397 43 144 4.71E-12 T 14-10-2018 IPR024042 TM1646-like domain superfamily Tlie_0134 9d5810df40cd0a0b359990dd89a5c508 145 Gene3D G3DSA:1.20.120.490 35 145 1.8E-13 T 14-10-2018 IPR024042 TM1646-like domain superfamily Tlie_0709 2539a0bde5c7b4b741143ab87bacc768 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 14.499 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0709 2539a0bde5c7b4b741143ab87bacc768 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0709 2539a0bde5c7b4b741143ab87bacc768 44 Pfam PF00468 Ribosomal protein L34 2 44 5.8E-19 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0709 2539a0bde5c7b4b741143ab87bacc768 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 5.4E-18 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0709 2539a0bde5c7b4b741143ab87bacc768 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 40 5.0E-8 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0026 ccbc17857ec21d5186247589c1148b67 438 PIRSF PIRSF006066 5 438 1.3E-73 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_0026 ccbc17857ec21d5186247589c1148b67 438 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 432 2.3E-93 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_0026 ccbc17857ec21d5186247589c1148b67 438 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 426 1.1E-93 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tlie_1890 de8db9a334b5e03af2b3a97cb36398a1 176 Pfam PF06826 Predicted Permease Membrane Region 13 143 4.9E-20 T 14-10-2018 IPR006512 YidE/YbjL duplication Tlie_0683 545bfb3e984ed95a6f12b77f85a3cb58 456 SUPERFAMILY SSF53383 28 453 1.36E-71 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0683 545bfb3e984ed95a6f12b77f85a3cb58 456 Gene3D G3DSA:3.90.1150.10 33 444 7.8E-124 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_0683 545bfb3e984ed95a6f12b77f85a3cb58 456 PIRSF PIRSF000521 2 452 7.7E-126 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tlie_0683 545bfb3e984ed95a6f12b77f85a3cb58 456 Pfam PF00202 Aminotransferase class-III 28 447 1.1E-75 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tlie_0683 545bfb3e984ed95a6f12b77f85a3cb58 456 TIGRFAM TIGR03251 LAT_fam: L-lysine 6-transaminase 11 449 1.6E-174 T 14-10-2018 IPR017657 L-lysine 6-transaminase GO:0017000|GO:0030170|GO:0045484 MetaCyc: PWY-5298 Tlie_0683 545bfb3e984ed95a6f12b77f85a3cb58 456 Gene3D G3DSA:3.40.640.10 65 356 7.8E-124 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0383 dfc09e20c83a3ec7a57421f8fb7bd0f4 394 Pfam PF00155 Aminotransferase class I and II 32 382 1.1E-48 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tlie_0383 dfc09e20c83a3ec7a57421f8fb7bd0f4 394 SUPERFAMILY SSF53383 1 388 2.42E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0383 dfc09e20c83a3ec7a57421f8fb7bd0f4 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Tlie_0383 dfc09e20c83a3ec7a57421f8fb7bd0f4 394 Gene3D G3DSA:3.90.1150.10 25 382 5.4E-109 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_0383 dfc09e20c83a3ec7a57421f8fb7bd0f4 394 Gene3D G3DSA:3.40.640.10 43 282 5.4E-109 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0923 7f3f6bfe882e87788f2400966824e0b9 220 SUPERFAMILY SSF55315 115 165 8.05E-8 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Tlie_0923 7f3f6bfe882e87788f2400966824e0b9 220 Gene3D G3DSA:3.30.1330.30 112 214 2.0E-14 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Tlie_0923 7f3f6bfe882e87788f2400966824e0b9 220 Pfam PF04296 Protein of unknown function (DUF448) 19 92 1.9E-26 T 14-10-2018 IPR007393 Domain of unknown function DUF448 Tlie_0923 7f3f6bfe882e87788f2400966824e0b9 220 Gene3D G3DSA:3.30.1230.10 10 107 2.2E-28 T 14-10-2018 IPR035931 YlxR-like superfamily Tlie_0923 7f3f6bfe882e87788f2400966824e0b9 220 SUPERFAMILY SSF64376 17 98 1.27E-25 T 14-10-2018 IPR035931 YlxR-like superfamily Tlie_0858 aa5b6541a02c1b0a32644dab58cda931 318 SUPERFAMILY SSF53067 66 171 1.68E-9 T 14-10-2018 Tlie_0858 aa5b6541a02c1b0a32644dab58cda931 318 Gene3D G3DSA:3.30.1490.300 89 148 1.8E-12 T 14-10-2018 Tlie_0858 aa5b6541a02c1b0a32644dab58cda931 318 Pfam PF11104 Type IV pilus assembly protein PilM; 14 224 2.2E-11 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM Tlie_0522 3fda3c0d3cc2093336ecf821bf22be4e 185 SUPERFAMILY SSF53323 2 184 2.62E-35 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tlie_0522 3fda3c0d3cc2093336ecf821bf22be4e 185 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 9 180 7.2E-34 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Tlie_0522 3fda3c0d3cc2093336ecf821bf22be4e 185 Gene3D G3DSA:3.40.920.10 1 185 4.3E-40 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tlie_1842 774bd7c349be2b03d8efe3d8f5d5bd50 250 Gene3D G3DSA:3.20.20.70 1 250 6.3E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1842 774bd7c349be2b03d8efe3d8f5d5bd50 250 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 36 54 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Tlie_1842 774bd7c349be2b03d8efe3d8f5d5bd50 250 Pfam PF00218 Indole-3-glycerol phosphate synthase 14 244 1.9E-69 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Tlie_1842 774bd7c349be2b03d8efe3d8f5d5bd50 250 SUPERFAMILY SSF51366 15 246 4.9E-69 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tlie_0694 663f49c78bd3e310a9edaa8e6bcff30a 293 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 277 2.7E-39 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tlie_0159 c6519e89059f631ed8f4f036d1c8fb3e 292 SUPERFAMILY SSF50156 207 281 2.9E-10 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Tlie_0159 c6519e89059f631ed8f4f036d1c8fb3e 292 Gene3D G3DSA:2.30.42.10 206 289 1.8E-10 T 14-10-2018 Tlie_0628 a6e9a02be3286e2ae7c0f73fb9172587 603 SMART SM00729 247 467 6.9E-28 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tlie_0628 a6e9a02be3286e2ae7c0f73fb9172587 603 Gene3D G3DSA:3.80.30.20 246 435 1.1E-20 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tlie_0628 a6e9a02be3286e2ae7c0f73fb9172587 603 SUPERFAMILY SSF102114 221 576 2.35E-46 T 14-10-2018 Tlie_0628 a6e9a02be3286e2ae7c0f73fb9172587 603 Pfam PF04055 Radical SAM superfamily 251 414 2.2E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_0628 a6e9a02be3286e2ae7c0f73fb9172587 603 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 12 590 8.7E-211 T 14-10-2018 IPR023862 Conserved hypothetical protein CHP03960, radical SAM Tlie_0680 60701d409a78b1737aa18986b2446385 250 SUPERFAMILY SSF55120 1 246 1.73E-83 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0680 60701d409a78b1737aa18986b2446385 250 PIRSF PIRSF001430 1 249 3.3E-79 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0680 60701d409a78b1737aa18986b2446385 250 Gene3D G3DSA:3.30.70.580 1 105 1.7E-38 T 14-10-2018 Tlie_0680 60701d409a78b1737aa18986b2446385 250 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 32.875 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0680 60701d409a78b1737aa18986b2446385 250 Gene3D G3DSA:3.30.70.660 107 244 7.1E-37 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Tlie_0680 60701d409a78b1737aa18986b2446385 250 Pfam PF01416 tRNA pseudouridine synthase 9 104 2.1E-11 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0680 60701d409a78b1737aa18986b2446385 250 Pfam PF01416 tRNA pseudouridine synthase 143 246 7.3E-23 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0680 60701d409a78b1737aa18986b2446385 250 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 239 1.7E-59 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tlie_0418 04b60e403ba51eb1e78db66f4742f6a4 186 Gene3D G3DSA:3.40.220.10 1 179 6.2E-56 T 14-10-2018 Tlie_0418 04b60e403ba51eb1e78db66f4742f6a4 186 SUPERFAMILY SSF52949 4 176 1.67E-53 T 14-10-2018 Tlie_0418 04b60e403ba51eb1e78db66f4742f6a4 186 SMART SM00506 11 138 1.1E-38 T 14-10-2018 IPR002589 Macro domain Tlie_0418 04b60e403ba51eb1e78db66f4742f6a4 186 Pfam PF01661 Macro domain 28 138 8.1E-30 T 14-10-2018 IPR002589 Macro domain Tlie_1413 983b814c176fb2b1516eb8670a061574 344 Gene3D G3DSA:3.20.20.70 14 329 4.0E-59 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1413 983b814c176fb2b1516eb8670a061574 344 SUPERFAMILY SSF51412 5 308 1.45E-45 T 14-10-2018 Tlie_1413 983b814c176fb2b1516eb8670a061574 344 Pfam PF03060 Nitronate monooxygenase 15 326 7.4E-43 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Tlie_0813 f59b9dd0bfb7da24ad4fef5b0ca6f284 401 Gene3D G3DSA:3.40.640.10 67 292 1.3E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0813 f59b9dd0bfb7da24ad4fef5b0ca6f284 401 SUPERFAMILY SSF53383 7 400 1.71E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0813 f59b9dd0bfb7da24ad4fef5b0ca6f284 401 Pfam PF00155 Aminotransferase class I and II 59 393 3.7E-36 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tlie_0813 f59b9dd0bfb7da24ad4fef5b0ca6f284 401 Gene3D G3DSA:3.90.1150.10 23 398 1.3E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_1529 ab496f79263d3b3882de4830c6142701 276 Pfam PF04951 D-aminopeptidase 2 265 9.6E-88 T 14-10-2018 IPR007035 Peptidase M55, D-aminopeptidase Tlie_1529 ab496f79263d3b3882de4830c6142701 276 Gene3D G3DSA:3.30.1360.130 118 263 1.3E-80 T 14-10-2018 Tlie_1529 ab496f79263d3b3882de4830c6142701 276 SUPERFAMILY SSF63992 2 274 7.85E-71 T 14-10-2018 IPR036177 Peptidase M55, D-aminopeptidase superfamily Tlie_1529 ab496f79263d3b3882de4830c6142701 276 PIRSF PIRSF015853 1 276 2.0E-78 T 14-10-2018 IPR007035 Peptidase M55, D-aminopeptidase Tlie_1529 ab496f79263d3b3882de4830c6142701 276 Gene3D G3DSA:3.40.50.10780 2 217 1.3E-80 T 14-10-2018 IPR027476 D-aminopeptidase, N-terminal Tlie_0674 8f5e611d07b6b455833e4d2630cd60ac 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0674 8f5e611d07b6b455833e4d2630cd60ac 208 SMART SM00363 98 162 3.3E-21 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0674 8f5e611d07b6b455833e4d2630cd60ac 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 6.4E-31 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Tlie_0674 8f5e611d07b6b455833e4d2630cd60ac 208 Gene3D G3DSA:1.10.1050.10 6 208 2.1E-88 T 14-10-2018 Tlie_0674 8f5e611d07b6b455833e4d2630cd60ac 208 Gene3D G3DSA:3.10.290.10 97 193 2.1E-88 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tlie_0674 8f5e611d07b6b455833e4d2630cd60ac 208 Pfam PF01479 S4 domain 98 145 2.5E-22 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0674 8f5e611d07b6b455833e4d2630cd60ac 208 SUPERFAMILY SSF55174 3 208 8.64E-73 T 14-10-2018 Tlie_0674 8f5e611d07b6b455833e4d2630cd60ac 208 SMART SM01390 3 97 7.6E-52 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Tlie_0674 8f5e611d07b6b455833e4d2630cd60ac 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 2.6E-76 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Tlie_0674 8f5e611d07b6b455833e4d2630cd60ac 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 35.7 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Tlie_1780 53324a4c5b6b4f3e6538348d13df98eb 627 Gene3D G3DSA:3.60.9.10 4 214 1.5E-69 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_1780 53324a4c5b6b4f3e6538348d13df98eb 627 Gene3D G3DSA:1.10.599.10 243 622 3.2E-113 T 14-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Tlie_1780 53324a4c5b6b4f3e6538348d13df98eb 627 SUPERFAMILY SSF48310 217 625 3.92E-97 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1780 53324a4c5b6b4f3e6538348d13df98eb 627 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 9 208 6.4E-66 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1780 53324a4c5b6b4f3e6538348d13df98eb 627 SUPERFAMILY SSF56228 7 213 1.44E-58 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tlie_1780 53324a4c5b6b4f3e6538348d13df98eb 627 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 224 622 3.2E-113 T 14-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1780 53324a4c5b6b4f3e6538348d13df98eb 627 SMART SM00790 9 210 4.4E-78 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tlie_1780 53324a4c5b6b4f3e6538348d13df98eb 627 Gene3D G3DSA:1.10.569.10 244 434 3.2E-113 T 14-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Tlie_0193 eb1ad955638f9024b8e40c36a04f553c 151 Gene3D G3DSA:3.40.50.300 1 149 1.0E-21 T 14-10-2018 Tlie_0193 eb1ad955638f9024b8e40c36a04f553c 151 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 3 144 2.8E-37 T 14-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Tlie_0193 eb1ad955638f9024b8e40c36a04f553c 151 PIRSF PIRSF036409 2 147 2.3E-39 T 14-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Tlie_0193 eb1ad955638f9024b8e40c36a04f553c 151 SUPERFAMILY SSF52540 3 143 1.56E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1176 fcaa534ab51252ff46071b3f9a29ba83 121 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 113 5.2E-31 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Tlie_1176 fcaa534ab51252ff46071b3f9a29ba83 121 Gene3D G3DSA:3.30.2320.80 1 115 1.2E-31 T 14-10-2018 Tlie_1176 fcaa534ab51252ff46071b3f9a29ba83 121 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 114 21.304 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Tlie_1176 fcaa534ab51252ff46071b3f9a29ba83 121 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 114 7.3E-30 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Tlie_1176 fcaa534ab51252ff46071b3f9a29ba83 121 PIRSF PIRSF004761 1 117 9.0E-31 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Tlie_1176 fcaa534ab51252ff46071b3f9a29ba83 121 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 14-10-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site Tlie_0499 4f25aa80baf67481320ebc26d84a7e25 142 Pfam PF08901 Protein of unknown function (DUF1847) 59 104 6.1E-18 T 14-10-2018 IPR014997 Protein of unknown function DUF1847 Tlie_1388 7d1ecd4052b91aff0a22422e8a79238a 102 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 4 100 8.8E-35 T 14-10-2018 IPR002767 Thiamine-binding protein Tlie_1388 7d1ecd4052b91aff0a22422e8a79238a 102 Gene3D G3DSA:3.30.70.930 2 102 9.8E-37 T 14-10-2018 IPR029756 MTH1187/YkoF-like Tlie_1388 7d1ecd4052b91aff0a22422e8a79238a 102 Pfam PF01910 Thiamine-binding protein 6 97 1.1E-33 T 14-10-2018 IPR002767 Thiamine-binding protein Tlie_1388 7d1ecd4052b91aff0a22422e8a79238a 102 SUPERFAMILY SSF89957 3 101 1.11E-34 T 14-10-2018 IPR029756 MTH1187/YkoF-like Tlie_0329 67a15ebe2de875012374fe5ae6f31576 80 Gene3D G3DSA:3.40.30.10 1 75 5.7E-29 T 14-10-2018 Tlie_0329 67a15ebe2de875012374fe5ae6f31576 80 SUPERFAMILY SSF52833 2 75 6.03E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tlie_0329 67a15ebe2de875012374fe5ae6f31576 80 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 1 76 1.1E-30 T 14-10-2018 IPR005243 Redox-active disulphide protein 2 Tlie_0329 67a15ebe2de875012374fe5ae6f31576 80 Pfam PF13192 Thioredoxin domain 1 75 6.3E-27 T 14-10-2018 IPR012336 Thioredoxin-like fold Tlie_0329 67a15ebe2de875012374fe5ae6f31576 80 PIRSF PIRSF037031 1 77 5.5E-34 T 14-10-2018 IPR005243 Redox-active disulphide protein 2 Tlie_0381 7419daabb5cfba73f14be0c02287ec47 411 Pfam PF00501 AMP-binding enzyme 67 269 1.1E-15 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Tlie_0381 7419daabb5cfba73f14be0c02287ec47 411 Gene3D G3DSA:3.40.50.12780 3 309 6.9E-118 T 14-10-2018 Tlie_0381 7419daabb5cfba73f14be0c02287ec47 411 SUPERFAMILY SSF56801 16 369 2.62E-54 T 14-10-2018 Tlie_0381 7419daabb5cfba73f14be0c02287ec47 411 PIRSF PIRSF006444 3 410 5.2E-175 T 14-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 Tlie_0381 7419daabb5cfba73f14be0c02287ec47 411 Gene3D G3DSA:3.30.300.30 310 410 5.6E-22 T 14-10-2018 Tlie_0381 7419daabb5cfba73f14be0c02287ec47 411 Pfam PF14535 AMP-binding enzyme C-terminal domain 318 407 6.1E-17 T 14-10-2018 IPR028154 AMP-dependent ligase, C-terminal Tlie_1878 fa4de3e949864443a994cfe46c8c6359 147 Gene3D G3DSA:3.30.1330.80 2 138 4.7E-31 T 14-10-2018 Tlie_1878 fa4de3e949864443a994cfe46c8c6359 147 SUPERFAMILY SSF117856 6 140 7.32E-29 T 14-10-2018 Tlie_1878 fa4de3e949864443a994cfe46c8c6359 147 Pfam PF03479 Domain of unknown function (DUF296) 12 119 6.8E-19 T 14-10-2018 IPR005175 PPC domain Tlie_1175 7c4b77823fb398e271cd367a4df10073 218 PIRSF PIRSF005624 1 218 5.9E-80 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 Tlie_1175 7c4b77823fb398e271cd367a4df10073 218 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 4 214 2.0E-75 T 14-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 Tlie_1175 7c4b77823fb398e271cd367a4df10073 218 SUPERFAMILY SSF52540 3 214 1.22E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1175 7c4b77823fb398e271cd367a4df10073 218 Gene3D G3DSA:3.40.50.300 14 217 7.4E-55 T 14-10-2018 Tlie_1175 7c4b77823fb398e271cd367a4df10073 218 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 33 189 8.7E-27 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Tlie_1864 506ea93ace0b28f395d147d014ab14b3 98 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 17 93 5.8E-9 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 Tlie_0700 02d96fe88522984ee71301f55b5fca34 449 Pfam PF00574 Clp protease 65 197 6.6E-7 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Tlie_0700 02d96fe88522984ee71301f55b5fca34 449 SUPERFAMILY SSF141322 371 438 7.98E-9 T 14-10-2018 Tlie_0700 02d96fe88522984ee71301f55b5fca34 449 SUPERFAMILY SSF52096 44 198 5.54E-26 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tlie_0700 02d96fe88522984ee71301f55b5fca34 449 Gene3D G3DSA:3.90.226.10 29 248 1.4E-58 T 14-10-2018 Tlie_0700 02d96fe88522984ee71301f55b5fca34 449 Gene3D G3DSA:2.40.50.140 374 447 2.6E-18 T 14-10-2018 Tlie_0700 02d96fe88522984ee71301f55b5fca34 449 Pfam PF01957 NfeD-like C-terminal, partner-binding 299 437 1.7E-21 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain Tlie_0454 cbf6047f6b8ad7d6897fcdc68fca9d2a 235 Gene3D G3DSA:3.30.2170.10 6 233 3.0E-81 T 14-10-2018 Tlie_0454 cbf6047f6b8ad7d6897fcdc68fca9d2a 235 Hamap MF_00801 Endonuclease V [nfi]. 16 233 34.522 T 14-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 Tlie_0454 cbf6047f6b8ad7d6897fcdc68fca9d2a 235 Pfam PF04493 Endonuclease V 27 223 4.5E-74 T 14-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 Tlie_1581 76819b1517b9ac9105cf1ac6a89a599d 330 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 9 320 3.7E-85 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Tlie_1581 76819b1517b9ac9105cf1ac6a89a599d 330 PIRSF PIRSF001439 1 330 2.6E-94 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Tlie_1581 76819b1517b9ac9105cf1ac6a89a599d 330 Gene3D G3DSA:3.30.1780.10 5 325 1.6E-107 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 Tlie_1581 76819b1517b9ac9105cf1ac6a89a599d 330 SUPERFAMILY SSF51735 1 329 1.94E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1581 76819b1517b9ac9105cf1ac6a89a599d 330 Gene3D G3DSA:3.40.50.720 125 303 1.6E-107 T 14-10-2018 Tlie_0285 44c30f7ced9cfd9b51452806c0cb1039 465 Gene3D G3DSA:1.20.1730.10 27 462 8.5E-49 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Tlie_0285 44c30f7ced9cfd9b51452806c0cb1039 465 Pfam PF00474 Sodium:solute symporter family 37 407 1.2E-35 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Tlie_0959 f90caae426e65e26a48265009afd3145 467 Gene3D G3DSA:2.40.50.140 2 81 8.5E-17 T 14-10-2018 Tlie_0959 f90caae426e65e26a48265009afd3145 467 Gene3D G3DSA:3.40.1350.30 131 288 5.4E-95 T 14-10-2018 Tlie_0959 f90caae426e65e26a48265009afd3145 467 Pfam PF01938 TRAM domain 4 45 1.0E-5 T 14-10-2018 IPR002792 TRAM domain Tlie_0959 f90caae426e65e26a48265009afd3145 467 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 437 447 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site Tlie_0959 f90caae426e65e26a48265009afd3145 467 Gene3D G3DSA:3.40.50.150 83 448 5.4E-95 T 14-10-2018 Tlie_0959 f90caae426e65e26a48265009afd3145 467 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 285 454 8.1E-20 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Tlie_0959 f90caae426e65e26a48265009afd3145 467 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 385 416 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site Tlie_0959 f90caae426e65e26a48265009afd3145 467 SUPERFAMILY SSF53335 70 454 1.67E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_0959 f90caae426e65e26a48265009afd3145 467 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 17 447 1.2E-111 T 14-10-2018 Tlie_0959 f90caae426e65e26a48265009afd3145 467 SUPERFAMILY SSF50249 3 55 1.03E-8 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0213 4b1cc3d14da41437a33452cc34562c95 129 SUPERFAMILY SSF55166 11 114 1.41E-25 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Tlie_0213 4b1cc3d14da41437a33452cc34562c95 129 Pfam PF08291 Peptidase M15 11 110 1.3E-22 T 14-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 Tlie_0213 4b1cc3d14da41437a33452cc34562c95 129 Gene3D G3DSA:3.30.1380.10 24 125 4.4E-24 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Tlie_0139 e274308016fa5f42b4299d36881c2ee5 171 SUPERFAMILY SSF52016 3 164 1.33E-52 T 14-10-2018 Tlie_0139 e274308016fa5f42b4299d36881c2ee5 171 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 5 165 38.936 T 14-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Tlie_0139 e274308016fa5f42b4299d36881c2ee5 171 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 7 162 2.5E-60 T 14-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Tlie_0139 e274308016fa5f42b4299d36881c2ee5 171 Pfam PF00694 Aconitase C-terminal domain 44 107 2.1E-19 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Tlie_0139 e274308016fa5f42b4299d36881c2ee5 171 Gene3D G3DSA:3.20.19.10 1 170 6.2E-62 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Tlie_0219 9bedeee600988bfe6ea4f28db0e9959b 331 Gene3D G3DSA:3.40.190.170 25 331 3.2E-91 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Tlie_0219 9bedeee600988bfe6ea4f28db0e9959b 331 PIRSF PIRSF006470 1 329 5.3E-76 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Tlie_0219 9bedeee600988bfe6ea4f28db0e9959b 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 312 2.0E-70 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Tlie_0219 9bedeee600988bfe6ea4f28db0e9959b 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 35 287 2.8E-54 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Tlie_1053 1f2c9833cef6c62fc33bfd5a920bc88d 287 SUPERFAMILY SSF52540 16 107 1.38E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1053 1f2c9833cef6c62fc33bfd5a920bc88d 287 SUPERFAMILY SSF52540 17 212 5.31E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1053 1f2c9833cef6c62fc33bfd5a920bc88d 287 Gene3D G3DSA:3.40.50.300 12 154 1.0E-6 T 14-10-2018 Tlie_1400 e9ccc57f6e7671c1726837a944e6242d 277 Gene3D G3DSA:3.90.226.10 62 261 1.8E-23 T 14-10-2018 Tlie_1400 e9ccc57f6e7671c1726837a944e6242d 277 SUPERFAMILY SSF52096 59 234 6.79E-27 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tlie_1400 e9ccc57f6e7671c1726837a944e6242d 277 Pfam PF01972 Serine dehydrogenase proteinase 6 271 7.0E-120 T 14-10-2018 IPR002825 Peptidase S49, serine-peptidase prokaryotes GO:0016021 Tlie_0832 b2e46daa1caa21abdb5d2e494f3f903d 203 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 200 31.1 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Tlie_0832 b2e46daa1caa21abdb5d2e494f3f903d 203 Gene3D G3DSA:3.40.50.880 1 203 2.2E-59 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_0832 b2e46daa1caa21abdb5d2e494f3f903d 203 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 197 5.9E-58 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Tlie_0832 b2e46daa1caa21abdb5d2e494f3f903d 203 PIRSF PIRSF000495 1 202 9.6E-60 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Tlie_0832 b2e46daa1caa21abdb5d2e494f3f903d 203 SUPERFAMILY SSF52317 2 198 5.0E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tlie_0832 b2e46daa1caa21abdb5d2e494f3f903d 203 Pfam PF00117 Glutamine amidotransferase class-I 4 186 3.8E-18 T 14-10-2018 IPR017926 Glutamine amidotransferase Tlie_1766 b27272140443ff7a138812a947914a5a 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 462 2.5E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_1766 b27272140443ff7a138812a947914a5a 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 318 9.0E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tlie_1766 b27272140443ff7a138812a947914a5a 467 SMART SM00388 256 322 3.0E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tlie_1766 b27272140443ff7a138812a947914a5a 467 Gene3D G3DSA:1.10.287.130 207 319 7.6E-9 T 14-10-2018 Tlie_1766 b27272140443ff7a138812a947914a5a 467 Gene3D G3DSA:3.30.565.10 321 467 4.8E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_1766 b27272140443ff7a138812a947914a5a 467 SUPERFAMILY SSF55874 324 461 2.23E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_1766 b27272140443ff7a138812a947914a5a 467 SMART SM00387 359 463 4.6E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_1766 b27272140443ff7a138812a947914a5a 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 1.2E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1766 b27272140443ff7a138812a947914a5a 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 1.2E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1766 b27272140443ff7a138812a947914a5a 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 1.2E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tlie_1766 b27272140443ff7a138812a947914a5a 467 SUPERFAMILY SSF47384 249 317 3.73E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tlie_1726 0652b9fc9da7e5263ed948347a818eb9 330 Gene3D G3DSA:3.40.50.2300 44 289 1.2E-77 T 14-10-2018 Tlie_1726 0652b9fc9da7e5263ed948347a818eb9 330 SUPERFAMILY SSF53822 37 273 1.47E-13 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Tlie_1726 0652b9fc9da7e5263ed948347a818eb9 330 Gene3D G3DSA:3.40.50.2300 136 304 1.2E-77 T 14-10-2018 Tlie_1726 0652b9fc9da7e5263ed948347a818eb9 330 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 33 302 3.8E-60 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 Tlie_0155 d7dc4c96100fac794dcd5d6630899a40 238 Gene3D G3DSA:3.40.50.1860 109 223 1.1E-6 T 14-10-2018 Tlie_0155 d7dc4c96100fac794dcd5d6630899a40 238 Gene3D G3DSA:3.40.50.1860 64 108 1.1E-6 T 14-10-2018 Tlie_0443 a7bad72f3d9152a0ba0ff4898faf646e 49 Gene3D G3DSA:2.20.28.120 1 49 1.5E-18 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0443 a7bad72f3d9152a0ba0ff4898faf646e 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 5.4E-17 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0443 a7bad72f3d9152a0ba0ff4898faf646e 49 SUPERFAMILY SSF57829 2 49 2.81E-16 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Tlie_0443 a7bad72f3d9152a0ba0ff4898faf646e 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.64 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0443 a7bad72f3d9152a0ba0ff4898faf646e 49 Pfam PF00471 Ribosomal protein L33 4 49 1.1E-19 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0781 14cd5cc2b8bec2bc7c040673347af301 250 Pfam PF11967 Recombination protein O N terminal 15 79 1.2E-4 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal Tlie_0781 14cd5cc2b8bec2bc7c040673347af301 250 SUPERFAMILY SSF57863 98 211 4.97E-14 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Tlie_0781 14cd5cc2b8bec2bc7c040673347af301 250 Pfam PF02565 Recombination protein O C terminal 107 202 4.7E-8 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Tlie_1506 b5e409c600872f43d83f45d7c1530be5 361 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 105 8.4E-9 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tlie_1506 b5e409c600872f43d83f45d7c1530be5 361 SUPERFAMILY SSF51735 2 105 7.04E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1506 b5e409c600872f43d83f45d7c1530be5 361 Gene3D G3DSA:1.10.1040.10 196 349 1.5E-39 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Tlie_1506 b5e409c600872f43d83f45d7c1530be5 361 SUPERFAMILY SSF48179 188 359 1.16E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tlie_1506 b5e409c600872f43d83f45d7c1530be5 361 Pfam PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain 186 330 3.4E-32 T 14-10-2018 IPR003421 Opine dehydrogenase GO:0016491|GO:0050662|GO:0055114 Tlie_1506 b5e409c600872f43d83f45d7c1530be5 361 Gene3D G3DSA:3.40.50.720 1 194 1.1E-57 T 14-10-2018 Tlie_0457 d8c1d57bfb8e1f120fa37c74d01c9943 100 Gene3D G3DSA:1.10.10.10 20 64 1.4E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0457 d8c1d57bfb8e1f120fa37c74d01c9943 100 SUPERFAMILY SSF46689 20 98 7.53E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0457 d8c1d57bfb8e1f120fa37c74d01c9943 100 Pfam PF13551 Winged helix-turn helix 24 81 7.5E-7 T 14-10-2018 Tlie_0726 c30304e431ae2ee30d0d4fd076eab251 490 SUPERFAMILY SSF161070 8 475 1.31E-104 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 Tlie_0726 c30304e431ae2ee30d0d4fd076eab251 490 Pfam PF00209 Sodium:neurotransmitter symporter family 8 122 3.6E-20 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_0726 c30304e431ae2ee30d0d4fd076eab251 490 Pfam PF00209 Sodium:neurotransmitter symporter family 145 475 5.4E-32 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_0726 c30304e431ae2ee30d0d4fd076eab251 490 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 15 36 4.4E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_0726 c30304e431ae2ee30d0d4fd076eab251 490 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 44 63 4.4E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_0726 c30304e431ae2ee30d0d4fd076eab251 490 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 89 115 4.4E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_0726 c30304e431ae2ee30d0d4fd076eab251 490 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 409 428 4.4E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_0357 bc031ac0981e83fcf523eea0bdede436 381 Pfam PF00990 Diguanylate cyclase, GGDEF domain 198 339 3.0E-23 T 14-10-2018 IPR000160 GGDEF domain Tlie_0357 bc031ac0981e83fcf523eea0bdede436 381 SMART SM00267 186 341 1.8E-22 T 14-10-2018 IPR000160 GGDEF domain Tlie_0357 bc031ac0981e83fcf523eea0bdede436 381 SUPERFAMILY SSF55073 203 339 3.84E-24 T 14-10-2018 IPR029787 Nucleotide cyclase Tlie_0357 bc031ac0981e83fcf523eea0bdede436 381 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 194 340 1.8E-24 T 14-10-2018 IPR000160 GGDEF domain Tlie_0357 bc031ac0981e83fcf523eea0bdede436 381 Gene3D G3DSA:3.30.70.270 185 346 8.8E-29 T 14-10-2018 Tlie_0838 ee2ff4ed4cac5d47f5292aed1dd07181 463 SUPERFAMILY SSF46785 18 92 4.62E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_0838 ee2ff4ed4cac5d47f5292aed1dd07181 463 Gene3D G3DSA:3.40.640.10 140 356 1.6E-85 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tlie_0838 ee2ff4ed4cac5d47f5292aed1dd07181 463 Gene3D G3DSA:3.90.1150.10 106 458 1.6E-85 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tlie_0838 ee2ff4ed4cac5d47f5292aed1dd07181 463 SUPERFAMILY SSF53383 102 459 4.64E-75 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tlie_0838 ee2ff4ed4cac5d47f5292aed1dd07181 463 SMART SM00345 29 88 1.2E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0838 ee2ff4ed4cac5d47f5292aed1dd07181 463 Gene3D G3DSA:1.10.10.10 13 89 1.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_0838 ee2ff4ed4cac5d47f5292aed1dd07181 463 Pfam PF00155 Aminotransferase class I and II 133 455 2.2E-32 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tlie_0838 ee2ff4ed4cac5d47f5292aed1dd07181 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 88 1.3E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tlie_0323 f6ecc704d49c59e5980343603e20be7f 261 Pfam PF11209 Protein of unknown function (DUF2993) 75 239 1.4E-8 T 14-10-2018 IPR021373 Protein of unknown function DUF2993 Tlie_0877 d1a0bc38c321bb7e73a8dccf7dace1bf 289 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 5 276 5.7E-78 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Tlie_0877 d1a0bc38c321bb7e73a8dccf7dace1bf 289 Gene3D G3DSA:3.40.1010.20 7 272 2.6E-86 T 14-10-2018 Tlie_0877 d1a0bc38c321bb7e73a8dccf7dace1bf 289 Gene3D G3DSA:3.40.1010.20 98 194 2.6E-86 T 14-10-2018 Tlie_0877 d1a0bc38c321bb7e73a8dccf7dace1bf 289 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 4 281 29.925 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Tlie_0877 d1a0bc38c321bb7e73a8dccf7dace1bf 289 Pfam PF02401 LytB protein 6 275 3.5E-81 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Tlie_0877 d1a0bc38c321bb7e73a8dccf7dace1bf 289 Gene3D G3DSA:3.40.50.11270 15 97 2.6E-86 T 14-10-2018 Tlie_1144 597f6c6c23f145ab09d09af6076f4cc9 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tlie_1144 597f6c6c23f145ab09d09af6076f4cc9 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 234 7.2E-78 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 Tlie_1144 597f6c6c23f145ab09d09af6076f4cc9 239 SUPERFAMILY SSF56104 2 233 1.7E-83 T 14-10-2018 Tlie_1144 597f6c6c23f145ab09d09af6076f4cc9 239 Pfam PF01259 SAICAR synthetase 7 231 4.7E-67 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tlie_1144 597f6c6c23f145ab09d09af6076f4cc9 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tlie_1144 597f6c6c23f145ab09d09af6076f4cc9 239 Gene3D G3DSA:3.30.470.20 85 221 1.0E-97 T 14-10-2018 Tlie_1144 597f6c6c23f145ab09d09af6076f4cc9 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 235 33.018 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tlie_1144 597f6c6c23f145ab09d09af6076f4cc9 239 Gene3D G3DSA:3.30.200.20 6 232 1.0E-97 T 14-10-2018 Tlie_1126 bbd36efb4f4a97c33a2c304d12ce3398 306 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 12 306 3.1E-67 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 Tlie_1126 bbd36efb4f4a97c33a2c304d12ce3398 306 Pfam PF08340 Domain of unknown function (DUF1732) 221 306 8.6E-32 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 Tlie_1126 bbd36efb4f4a97c33a2c304d12ce3398 306 Pfam PF03755 YicC-like family, N-terminal region 13 166 1.5E-36 T 14-10-2018 IPR013527 YicC-like, N-terminal Tlie_1106 40c04752c4f41362487418d41250084e 202 PIRSF PIRSF037733 5 193 1.3E-66 T 14-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 Tlie_1106 40c04752c4f41362487418d41250084e 202 Gene3D G3DSA:3.10.129.10 72 190 3.9E-34 T 14-10-2018 Tlie_1106 40c04752c4f41362487418d41250084e 202 Gene3D G3DSA:1.10.10.10 1 65 5.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1106 40c04752c4f41362487418d41250084e 202 SUPERFAMILY SSF54637 78 183 5.92E-20 T 14-10-2018 IPR029069 HotDog domain superfamily Tlie_1850 daab837ee33487606b9e1e230023e983 425 Gene3D G3DSA:3.20.20.540 45 365 1.0E-140 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tlie_1850 daab837ee33487606b9e1e230023e983 425 Pfam PF01964 Radical SAM ThiC family 4 422 2.0E-181 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tlie_1850 daab837ee33487606b9e1e230023e983 425 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 4 422 3.0E-165 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tlie_1130 2bdc3edd4b2ebc9aa38d6bfd061b53de 194 Pfam PF04079 Segregation and condensation complex subunit ScpB 8 167 6.8E-52 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Tlie_1130 2bdc3edd4b2ebc9aa38d6bfd061b53de 194 PIRSF PIRSF019345 3 194 1.9E-53 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Tlie_1130 2bdc3edd4b2ebc9aa38d6bfd061b53de 194 Gene3D G3DSA:1.10.10.10 3 78 3.7E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1130 2bdc3edd4b2ebc9aa38d6bfd061b53de 194 SUPERFAMILY SSF46785 7 77 2.9E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1130 2bdc3edd4b2ebc9aa38d6bfd061b53de 194 SUPERFAMILY SSF46785 85 158 4.4E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1130 2bdc3edd4b2ebc9aa38d6bfd061b53de 194 Gene3D G3DSA:1.10.10.10 79 179 7.9E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1130 2bdc3edd4b2ebc9aa38d6bfd061b53de 194 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 6 172 2.2E-34 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Tlie_1549 1b3c8ead7f25f1a54b6458de28f90f7f 199 Pfam PF13456 Reverse transcriptase-like 6 127 1.6E-19 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Tlie_1549 1b3c8ead7f25f1a54b6458de28f90f7f 199 SUPERFAMILY SSF53098 5 125 4.81E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_1549 1b3c8ead7f25f1a54b6458de28f90f7f 199 Gene3D G3DSA:3.30.420.10 1 139 4.8E-36 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tlie_0843 b3b18edc8796241364b5cfcbb67f8081 230 Pfam PF04298 Putative neutral zinc metallopeptidase 10 224 1.7E-85 T 14-10-2018 IPR007395 Putative neutral zinc metallopeptidase Tlie_1057 2100aff0bfcb0dae46620b5bdebad2c7 307 Pfam PF00953 Glycosyl transferase family 4 83 207 2.8E-18 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Tlie_0534 e928ac644a9ecb495c501783e2203aeb 177 Gene3D G3DSA:3.60.20.10 1 176 1.9E-60 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tlie_0534 e928ac644a9ecb495c501783e2203aeb 177 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 5 174 1.6E-75 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Tlie_0534 e928ac644a9ecb495c501783e2203aeb 177 Pfam PF00227 Proteasome subunit 1 174 4.8E-24 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Tlie_0534 e928ac644a9ecb495c501783e2203aeb 177 PIRSF PIRSF039093 1 177 9.2E-79 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Tlie_0534 e928ac644a9ecb495c501783e2203aeb 177 SUPERFAMILY SSF56235 1 175 1.91E-54 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tlie_0336 e577b4f16b12109a5e27d812c9e7f29a 429 SUPERFAMILY SSF102114 110 353 9.29E-35 T 14-10-2018 Tlie_0336 e577b4f16b12109a5e27d812c9e7f29a 429 PIRSF PIRSF004911 1 396 6.6E-163 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Tlie_0336 e577b4f16b12109a5e27d812c9e7f29a 429 Gene3D G3DSA:3.20.20.70 59 344 1.5E-115 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0336 e577b4f16b12109a5e27d812c9e7f29a 429 Gene3D G3DSA:2.40.50.600 345 411 5.3E-17 T 14-10-2018 Tlie_0336 e577b4f16b12109a5e27d812c9e7f29a 429 Pfam PF13353 4Fe-4S single cluster domain 124 194 1.4E-5 T 14-10-2018 Tlie_0336 e577b4f16b12109a5e27d812c9e7f29a 429 Pfam PF12544 Lysine-2,3-aminomutase 317 427 4.4E-37 T 14-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain Tlie_0336 e577b4f16b12109a5e27d812c9e7f29a 429 Pfam PF04055 Radical SAM superfamily 126 273 6.3E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_0336 e577b4f16b12109a5e27d812c9e7f29a 429 TIGRFAM TIGR00238 TIGR00238: KamA family protein 10 338 1.2E-117 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Tlie_0336 e577b4f16b12109a5e27d812c9e7f29a 429 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 18 422 7.7E-183 T 14-10-2018 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 Tlie_1791 b2b9e5a8c79dab16994414a64f5b7fde 200 Pfam PF00881 Nitroreductase family 74 159 2.6E-11 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tlie_1791 b2b9e5a8c79dab16994414a64f5b7fde 200 Pfam PF00881 Nitroreductase family 16 68 3.9E-10 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tlie_1791 b2b9e5a8c79dab16994414a64f5b7fde 200 SUPERFAMILY SSF55469 6 195 2.75E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tlie_1791 b2b9e5a8c79dab16994414a64f5b7fde 200 Gene3D G3DSA:3.40.109.10 2 196 1.3E-50 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tlie_0385 2e6af3034791f8b5b3bca1eed9857a6b 133 SUPERFAMILY SSF111038 5 129 3.92E-46 T 14-10-2018 IPR035917 YjbQ-like superfamily Tlie_0385 2e6af3034791f8b5b3bca1eed9857a6b 133 PIRSF PIRSF004681 2 132 2.7E-42 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Tlie_0385 2e6af3034791f8b5b3bca1eed9857a6b 133 Pfam PF01894 Uncharacterised protein family UPF0047 17 129 2.2E-41 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Tlie_0385 2e6af3034791f8b5b3bca1eed9857a6b 133 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 129 1.5E-47 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Tlie_0385 2e6af3034791f8b5b3bca1eed9857a6b 133 Gene3D G3DSA:2.60.120.460 1 132 8.4E-53 T 14-10-2018 IPR035917 YjbQ-like superfamily Tlie_1679 2124d3f4f6b54fb4ba23044fbe76b666 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 11 89 8.8E-20 T 14-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein Tlie_1679 2124d3f4f6b54fb4ba23044fbe76b666 99 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 9 86 6.0E-7 T 14-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 Tlie_1051 ac57e8c5fbc9786d0b093f3b851b1afc 242 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 240 2.0E-82 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Tlie_1051 ac57e8c5fbc9786d0b093f3b851b1afc 242 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 241 39.924 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Tlie_1051 ac57e8c5fbc9786d0b093f3b851b1afc 242 SUPERFAMILY SSF64005 13 236 9.02E-83 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Tlie_1051 ac57e8c5fbc9786d0b093f3b851b1afc 242 Gene3D G3DSA:3.40.1180.10 4 242 1.4E-95 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Tlie_1051 ac57e8c5fbc9786d0b093f3b851b1afc 242 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 240 5.2E-82 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Tlie_1051 ac57e8c5fbc9786d0b093f3b851b1afc 242 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 186 203 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Tlie_0319 184aeaf41d73cf86015770f36653d413 975 SUPERFAMILY SSF52540 267 640 2.35E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0319 184aeaf41d73cf86015770f36653d413 975 Pfam PF12705 PD-(D/E)XK nuclease superfamily 711 962 7.4E-28 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Tlie_1680 d577d0c54de604d0f22cb6ccdf5a9e0d 306 Gene3D G3DSA:3.20.20.60 1 300 2.2E-100 T 14-10-2018 Tlie_1680 d577d0c54de604d0f22cb6ccdf5a9e0d 306 PIRSF PIRSF015582 1 298 6.0E-85 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like Tlie_1680 d577d0c54de604d0f22cb6ccdf5a9e0d 306 SUPERFAMILY SSF51621 5 237 4.34E-66 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tlie_1680 d577d0c54de604d0f22cb6ccdf5a9e0d 306 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 8 227 1.0E-62 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Tlie_1404 98767e87cb64578ec0037b520c37960b 159 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 3 155 2.6E-50 T 14-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 Tlie_1404 98767e87cb64578ec0037b520c37960b 159 Gene3D G3DSA:1.10.10.1240 2 72 2.9E-31 T 14-10-2018 Tlie_1404 98767e87cb64578ec0037b520c37960b 159 Gene3D G3DSA:1.10.1200.150 78 159 5.3E-8 T 14-10-2018 Tlie_1743 2ed5720afa098f76ff9147e154da9f7d 518 Pfam PF03806 AbgT putative transporter family 13 515 6.0E-153 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 Tlie_1008 a0179493020827140c06ea9f5ad9a472 291 Pfam PF01513 ATP-NAD kinase 55 265 3.5E-56 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Tlie_1008 a0179493020827140c06ea9f5ad9a472 291 SUPERFAMILY SSF111331 8 288 2.88E-79 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Tlie_1008 a0179493020827140c06ea9f5ad9a472 291 Hamap MF_00361 NAD kinase [nadK]. 7 286 30.504 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Tlie_1008 a0179493020827140c06ea9f5ad9a472 291 Gene3D G3DSA:3.40.50.10330 25 286 4.0E-81 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Tlie_1008 a0179493020827140c06ea9f5ad9a472 291 Gene3D G3DSA:2.60.200.30 126 263 4.0E-81 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Tlie_0017 39401aac4e7fe5dc695eb7eb5034382e 158 Pfam PF03773 Predicted permease 31 151 6.0E-8 T 14-10-2018 IPR005524 Predicted permease DUF318 Tlie_1042 8d8ac3daf6acab514c9c0ac101ae896e 414 PRINTS PR01466 Bacterial arginine deiminase signature 348 365 3.9E-49 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Tlie_1042 8d8ac3daf6acab514c9c0ac101ae896e 414 PRINTS PR01466 Bacterial arginine deiminase signature 391 409 3.9E-49 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Tlie_1042 8d8ac3daf6acab514c9c0ac101ae896e 414 PRINTS PR01466 Bacterial arginine deiminase signature 368 382 3.9E-49 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Tlie_1042 8d8ac3daf6acab514c9c0ac101ae896e 414 PRINTS PR01466 Bacterial arginine deiminase signature 184 199 3.9E-49 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Tlie_1042 8d8ac3daf6acab514c9c0ac101ae896e 414 PRINTS PR01466 Bacterial arginine deiminase signature 156 174 3.9E-49 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Tlie_1042 8d8ac3daf6acab514c9c0ac101ae896e 414 PRINTS PR01466 Bacterial arginine deiminase signature 6 26 3.9E-49 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Tlie_1042 8d8ac3daf6acab514c9c0ac101ae896e 414 Gene3D G3DSA:3.75.10.10 10 409 1.9E-149 T 14-10-2018 Tlie_1042 8d8ac3daf6acab514c9c0ac101ae896e 414 PIRSF PIRSF006356 1 412 9.1E-141 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Tlie_1042 8d8ac3daf6acab514c9c0ac101ae896e 414 Pfam PF02274 Amidinotransferase 22 409 5.2E-94 T 14-10-2018 Tlie_1042 8d8ac3daf6acab514c9c0ac101ae896e 414 Hamap MF_00242 Arginine deiminase [arcA]. 5 412 41.67 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Tlie_1042 8d8ac3daf6acab514c9c0ac101ae896e 414 Gene3D G3DSA:1.10.3930.10 72 155 1.9E-149 T 14-10-2018 Tlie_1042 8d8ac3daf6acab514c9c0ac101ae896e 414 SUPERFAMILY SSF55909 3 412 8.24E-119 T 14-10-2018 Tlie_0846 a6bc72e86c337f5f4546cf6c2a3f0238 359 SUPERFAMILY SSF54184 34 93 6.8E-7 T 14-10-2018 Tlie_0846 a6bc72e86c337f5f4546cf6c2a3f0238 359 SMART SM00740 168 235 1.1E-10 T 14-10-2018 IPR005543 PASTA domain Tlie_0846 a6bc72e86c337f5f4546cf6c2a3f0238 359 SMART SM00740 30 95 4.3E-11 T 14-10-2018 IPR005543 PASTA domain Tlie_0846 a6bc72e86c337f5f4546cf6c2a3f0238 359 SMART SM00740 96 163 1.9E-6 T 14-10-2018 IPR005543 PASTA domain Tlie_0846 a6bc72e86c337f5f4546cf6c2a3f0238 359 Gene3D G3DSA:3.30.10.20 35 96 1.7E-13 T 14-10-2018 Tlie_0846 a6bc72e86c337f5f4546cf6c2a3f0238 359 Pfam PF03793 PASTA domain 102 162 3.9E-10 T 14-10-2018 IPR005543 PASTA domain Tlie_0846 a6bc72e86c337f5f4546cf6c2a3f0238 359 Pfam PF03793 PASTA domain 35 94 3.1E-13 T 14-10-2018 IPR005543 PASTA domain Tlie_0846 a6bc72e86c337f5f4546cf6c2a3f0238 359 Pfam PF03793 PASTA domain 172 234 7.3E-12 T 14-10-2018 IPR005543 PASTA domain Tlie_0846 a6bc72e86c337f5f4546cf6c2a3f0238 359 Gene3D G3DSA:3.30.10.20 169 237 1.3E-14 T 14-10-2018 Tlie_0846 a6bc72e86c337f5f4546cf6c2a3f0238 359 Gene3D G3DSA:3.30.10.20 97 165 1.1E-15 T 14-10-2018 Tlie_0465 0dae3266325385fc37a23a4c94cf2d94 612 Pfam PF05872 Bacterial protein of unknown function (DUF853) 426 536 9.1E-5 T 14-10-2018 IPR033186 Helicase HerA-like C-terminal Tlie_0465 0dae3266325385fc37a23a4c94cf2d94 612 Gene3D G3DSA:3.40.50.300 118 278 3.1E-21 T 14-10-2018 Tlie_0465 0dae3266325385fc37a23a4c94cf2d94 612 Gene3D G3DSA:3.40.50.300 348 565 1.4E-45 T 14-10-2018 Tlie_0465 0dae3266325385fc37a23a4c94cf2d94 612 Pfam PF01935 Domain of unknown function DUF87 134 414 7.8E-48 T 14-10-2018 IPR002789 Helicase HerA, central domain Tlie_0465 0dae3266325385fc37a23a4c94cf2d94 612 SMART SM00382 155 502 0.009 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0465 0dae3266325385fc37a23a4c94cf2d94 612 SUPERFAMILY SSF52540 137 560 1.29E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0688 7229e33b7a5681b582d4732b9522c096 223 Pfam PF00156 Phosphoribosyl transferase domain 125 215 1.4E-9 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tlie_0688 7229e33b7a5681b582d4732b9522c096 223 Gene3D G3DSA:3.40.50.2020 73 222 3.6E-16 T 14-10-2018 Tlie_0688 7229e33b7a5681b582d4732b9522c096 223 SUPERFAMILY SSF53271 67 216 4.46E-20 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tlie_0245 b70f22385d546bd197511b80a452753b 285 Pfam PF01867 CRISPR associated protein Cas1 39 230 1.1E-41 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Tlie_0245 b70f22385d546bd197511b80a452753b 285 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 39 233 3.0E-36 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Tlie_0245 b70f22385d546bd197511b80a452753b 285 Gene3D G3DSA:1.20.120.920 37 276 4.8E-45 T 14-10-2018 Tlie_0476 db32d872f264cc11fde3deba650ce3ba 90 Pfam PF13244 Domain of unknown function (DUF4040) 10 75 1.8E-18 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 Tlie_0246 cac4471d67370023597686414bebd0b2 101 Pfam PF09827 CRISPR associated protein Cas2 1 68 1.6E-15 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Tlie_0246 cac4471d67370023597686414bebd0b2 101 SUPERFAMILY SSF143430 1 80 4.19E-20 T 14-10-2018 Tlie_0246 cac4471d67370023597686414bebd0b2 101 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 78 12.581 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Tlie_0246 cac4471d67370023597686414bebd0b2 101 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 77 9.3E-13 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Tlie_0246 cac4471d67370023597686414bebd0b2 101 Gene3D G3DSA:3.30.70.240 1 65 1.6E-19 T 14-10-2018 Tlie_0273 cfb0e18bdf2e4ec428b3c7ad3c213047 237 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0273 cfb0e18bdf2e4ec428b3c7ad3c213047 237 Pfam PF00005 ABC transporter 27 170 2.8E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0273 cfb0e18bdf2e4ec428b3c7ad3c213047 237 Gene3D G3DSA:3.40.50.300 5 232 2.0E-62 T 14-10-2018 Tlie_0273 cfb0e18bdf2e4ec428b3c7ad3c213047 237 SMART SM00382 36 219 9.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_0273 cfb0e18bdf2e4ec428b3c7ad3c213047 237 SUPERFAMILY SSF52540 7 225 6.97E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1625 0f0506bf9bdc01c303a0dcd3354f4379 112 SUPERFAMILY SSF75138 1 107 6.93E-15 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Tlie_1625 0f0506bf9bdc01c303a0dcd3354f4379 112 Gene3D G3DSA:3.40.1390.20 4 102 5.1E-6 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Tlie_0415 5ecd0deceef1d5204003f5af065fd05b 231 SUPERFAMILY SSF53681 126 228 2.29E-14 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tlie_0415 5ecd0deceef1d5204003f5af065fd05b 231 Gene3D G3DSA:3.40.50.1860 9 225 2.7E-62 T 14-10-2018 Tlie_0415 5ecd0deceef1d5204003f5af065fd05b 231 Pfam PF01177 Asp/Glu/Hydantoin racemase 12 227 1.4E-50 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tlie_0415 5ecd0deceef1d5204003f5af065fd05b 231 TIGRFAM TIGR00035 asp_race: aspartate racemase 7 229 1.7E-45 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 Tlie_0415 5ecd0deceef1d5204003f5af065fd05b 231 Gene3D G3DSA:3.40.50.1860 110 218 2.7E-62 T 14-10-2018 Tlie_0415 5ecd0deceef1d5204003f5af065fd05b 231 SUPERFAMILY SSF53681 7 116 1.66E-27 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tlie_1630 a168748e23d17888b0246ca3585f184c 121 Gene3D G3DSA:2.60.120.10 11 119 1.2E-23 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Tlie_1630 a168748e23d17888b0246ca3585f184c 121 Pfam PF07883 Cupin domain 49 112 2.5E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Tlie_1630 a168748e23d17888b0246ca3585f184c 121 SUPERFAMILY SSF51182 25 113 1.83E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Tlie_1240 056272a78ac8adebbe250a58a60744e8 245 Gene3D G3DSA:3.40.50.620 2 240 2.7E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1240 056272a78ac8adebbe250a58a60744e8 245 SUPERFAMILY SSF52402 6 217 1.3E-49 T 14-10-2018 Tlie_1240 056272a78ac8adebbe250a58a60744e8 245 Pfam PF01171 PP-loop family 26 188 2.1E-17 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Tlie_1240 056272a78ac8adebbe250a58a60744e8 245 PIRSF PIRSF004976 1 244 2.0E-63 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 Tlie_1825 6391cd995d7901a3d3c62d140bb712ea 194 SUPERFAMILY SSF51161 4 176 5.71E-47 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Tlie_1825 6391cd995d7901a3d3c62d140bb712ea 194 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 35 67 4.4E-9 T 14-10-2018 IPR001451 Hexapeptide repeat Tlie_1825 6391cd995d7901a3d3c62d140bb712ea 194 Gene3D G3DSA:2.160.10.10 3 152 5.6E-46 T 14-10-2018 Tlie_1825 6391cd995d7901a3d3c62d140bb712ea 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 4 30 0.0025 T 14-10-2018 IPR001451 Hexapeptide repeat Tlie_1825 6391cd995d7901a3d3c62d140bb712ea 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 102 137 2.2E-6 T 14-10-2018 IPR001451 Hexapeptide repeat Tlie_1771 ecd07c7e9608376a69c58c06396321df 85 SUPERFAMILY SSF54862 5 75 3.07E-13 T 14-10-2018 Tlie_1771 ecd07c7e9608376a69c58c06396321df 85 Gene3D G3DSA:3.30.70.20 16 70 2.9E-11 T 14-10-2018 Tlie_0965 a4186a980fdae65ffd8d28ccdebdd77c 113 SUPERFAMILY SSF159468 10 110 1.96E-15 T 14-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0965 a4186a980fdae65ffd8d28ccdebdd77c 113 Gene3D G3DSA:3.40.50.10580 7 112 1.1E-19 T 14-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0965 a4186a980fdae65ffd8d28ccdebdd77c 113 Pfam PF01990 ATP synthase (F/14-kDa) subunit 10 101 2.3E-13 T 14-10-2018 IPR008218 ATPase, V1 complex, subunit F GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0792 2fa92170aef8e46a2b42ded2d7b3207f 277 TIGRFAM TIGR02757 TIGR02757: TIGR02757 family protein 29 255 3.2E-58 T 14-10-2018 IPR014127 Conserved hypothetical protein CHP02757 Tlie_0792 2fa92170aef8e46a2b42ded2d7b3207f 277 Pfam PF09674 Protein of unknown function (DUF2400) 33 255 1.0E-68 T 14-10-2018 IPR014127 Conserved hypothetical protein CHP02757 Tlie_0664 3c1c1693510a8fa574b49c37af43bd44 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.227 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0664 3c1c1693510a8fa574b49c37af43bd44 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 55 1.4E-23 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0664 3c1c1693510a8fa574b49c37af43bd44 60 Gene3D G3DSA:3.30.1390.20 1 59 2.2E-27 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Tlie_0664 3c1c1693510a8fa574b49c37af43bd44 60 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 3.0E-20 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Tlie_0664 3c1c1693510a8fa574b49c37af43bd44 60 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site Tlie_0664 3c1c1693510a8fa574b49c37af43bd44 60 SUPERFAMILY SSF55129 1 58 1.24E-21 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Tlie_0664 3c1c1693510a8fa574b49c37af43bd44 60 PIRSF PIRSF002211 1 60 4.7E-27 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tlie_0349 551f1d8f34444b174296c82289eb3648 262 Pfam PF00005 ABC transporter 21 176 1.0E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_0349 551f1d8f34444b174296c82289eb3648 262 SUPERFAMILY SSF52540 1 248 1.02E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0349 551f1d8f34444b174296c82289eb3648 262 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_0349 551f1d8f34444b174296c82289eb3648 262 Gene3D G3DSA:3.40.50.300 1 262 9.8E-83 T 14-10-2018 Tlie_0349 551f1d8f34444b174296c82289eb3648 262 SMART SM00382 30 226 5.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1510 b2e65d7f4a80ce449e28d7d17a557aa4 250 Pfam PF01569 PAP2 superfamily 83 189 9.6E-17 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Tlie_1510 b2e65d7f4a80ce449e28d7d17a557aa4 250 Gene3D G3DSA:1.20.144.10 111 219 2.2E-23 T 14-10-2018 Tlie_1510 b2e65d7f4a80ce449e28d7d17a557aa4 250 Gene3D G3DSA:1.20.144.10 19 110 2.4E-6 T 14-10-2018 Tlie_1510 b2e65d7f4a80ce449e28d7d17a557aa4 250 SUPERFAMILY SSF48317 22 191 1.7E-32 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Tlie_1510 b2e65d7f4a80ce449e28d7d17a557aa4 250 SMART SM00014 84 191 1.2E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Tlie_1746 bd55c2db05bb35371de59f4cf76e6fd7 359 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 336 2.6E-16 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tlie_0891 49eea523b4549c95195de84dccbe2015 273 Pfam PF06314 Acetoacetate decarboxylase (ADC) 12 270 1.3E-47 T 14-10-2018 IPR010451 Acetoacetate decarboxylase GO:0016829 KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 Tlie_0891 49eea523b4549c95195de84dccbe2015 273 SUPERFAMILY SSF160104 6 271 1.44E-40 T 14-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 Tlie_0891 49eea523b4549c95195de84dccbe2015 273 Gene3D G3DSA:2.40.400.10 7 273 1.2E-78 T 14-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 Tlie_0961 4d73d25b28c260a07c4c76a95f25ca84 671 Gene3D G3DSA:1.20.1460.20 48 287 6.1E-11 T 14-10-2018 Tlie_0961 4d73d25b28c260a07c4c76a95f25ca84 671 Pfam PF01496 V-type ATPase 116kDa subunit family 190 400 4.2E-16 T 14-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0961 4d73d25b28c260a07c4c76a95f25ca84 671 Pfam PF01496 V-type ATPase 116kDa subunit family 569 653 2.9E-12 T 14-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0961 4d73d25b28c260a07c4c76a95f25ca84 671 Gene3D G3DSA:3.30.70.2750 141 220 6.1E-11 T 14-10-2018 Tlie_0961 4d73d25b28c260a07c4c76a95f25ca84 671 Gene3D G3DSA:3.30.70.2170 11 310 6.1E-11 T 14-10-2018 Tlie_1827 2a3d7023be6bd94c615a733c4c89d9bb 626 Gene3D G3DSA:3.40.50.720 138 260 1.2E-32 T 14-10-2018 Tlie_1827 2a3d7023be6bd94c615a733c4c89d9bb 626 Pfam PF02719 Polysaccharide biosynthesis protein 279 560 2.9E-124 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Tlie_1827 2a3d7023be6bd94c615a733c4c89d9bb 626 SUPERFAMILY SSF53335 102 324 2.33E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_1827 2a3d7023be6bd94c615a733c4c89d9bb 626 Pfam PF13727 CoA-binding domain 65 231 8.4E-19 T 14-10-2018 Tlie_1827 2a3d7023be6bd94c615a733c4c89d9bb 626 SUPERFAMILY SSF51735 277 540 4.23E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tlie_1827 2a3d7023be6bd94c615a733c4c89d9bb 626 Gene3D G3DSA:3.40.50.720 274 608 9.3E-123 T 14-10-2018 Tlie_1829 8d4ffae2eb468a7d8b329503433444eb 161 SUPERFAMILY SSF88946 4 38 4.19E-6 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tlie_1829 8d4ffae2eb468a7d8b329503433444eb 161 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 158 1.0E-16 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tlie_1829 8d4ffae2eb468a7d8b329503433444eb 161 SUPERFAMILY SSF88659 109 160 2.22E-5 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tlie_1829 8d4ffae2eb468a7d8b329503433444eb 161 Gene3D G3DSA:1.10.10.10 23 161 5.9E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1829 8d4ffae2eb468a7d8b329503433444eb 161 Pfam PF04542 Sigma-70 region 2 8 41 2.5E-6 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tlie_0085 9538d607bd63d6df42ae7d6d714e5241 598 SUPERFAMILY SSF50969 168 360 6.75E-10 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Tlie_0085 9538d607bd63d6df42ae7d6d714e5241 598 Gene3D G3DSA:1.25.40.10 26 118 1.1E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_0085 9538d607bd63d6df42ae7d6d714e5241 598 SUPERFAMILY SSF48452 44 113 1.08E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_0085 9538d607bd63d6df42ae7d6d714e5241 598 Gene3D G3DSA:2.130.10.10 147 442 1.1E-8 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Tlie_1209 08731b6f6a5f1761aee330f05898bd68 87 Pfam PF13244 Domain of unknown function (DUF4040) 11 74 1.9E-19 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 Tlie_0014 897d2f837f98c247185c041a7199d805 550 Pfam PF03553 Na+/H+ antiporter family 190 517 2.6E-59 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Tlie_1331 5db3107f6eaa8b42b85520dba52afda0 179 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 80 7.4E-16 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tlie_1331 5db3107f6eaa8b42b85520dba52afda0 179 Gene3D G3DSA:1.20.120.1760 3 175 6.2E-14 T 14-10-2018 Tlie_1331 5db3107f6eaa8b42b85520dba52afda0 179 PIRSF PIRSF000847 1 179 1.5E-49 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Tlie_1331 5db3107f6eaa8b42b85520dba52afda0 179 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 5 175 1.9E-45 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Tlie_1331 5db3107f6eaa8b42b85520dba52afda0 179 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 58 80 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tlie_0325 4643c7f4c8144764afc9d5c015aaa9ed 110 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 4 109 1.1E-48 T 14-10-2018 IPR008231 Probable chaperone CsaA Tlie_0325 4643c7f4c8144764afc9d5c015aaa9ed 110 SUPERFAMILY SSF50249 2 109 3.67E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tlie_0325 4643c7f4c8144764afc9d5c015aaa9ed 110 Pfam PF01588 Putative tRNA binding domain 12 108 1.4E-17 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Tlie_0325 4643c7f4c8144764afc9d5c015aaa9ed 110 Gene3D G3DSA:2.40.50.140 1 110 1.9E-33 T 14-10-2018 Tlie_0490 4d737327d5c25af9959a709b89da8ef7 504 Pfam PF03553 Na+/H+ antiporter family 296 483 2.8E-34 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Tlie_0490 4d737327d5c25af9959a709b89da8ef7 504 Pfam PF03553 Na+/H+ antiporter family 162 288 2.9E-14 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Tlie_0490 4d737327d5c25af9959a709b89da8ef7 504 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 17 488 3.8E-134 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 Tlie_0654 6d34af8a2dd7024aba64d33c9bf839f3 68 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 7.7E-22 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0654 6d34af8a2dd7024aba64d33c9bf839f3 68 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.788 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0654 6d34af8a2dd7024aba64d33c9bf839f3 68 Gene3D G3DSA:1.10.287.310 1 67 2.8E-28 T 14-10-2018 Tlie_0654 6d34af8a2dd7024aba64d33c9bf839f3 68 Pfam PF00831 Ribosomal L29 protein 4 60 7.2E-26 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0654 6d34af8a2dd7024aba64d33c9bf839f3 68 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0654 6d34af8a2dd7024aba64d33c9bf839f3 68 SUPERFAMILY SSF46561 1 63 4.06E-24 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tlie_0110 6e4f75105d08c43156ede8552050def0 821 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 756 814 1.6E-11 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tlie_0110 6e4f75105d08c43156ede8552050def0 821 SUPERFAMILY SSF64518 148 814 1.16E-16 T 14-10-2018 Tlie_0110 6e4f75105d08c43156ede8552050def0 821 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 271 1.5E-62 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Tlie_0207 10dd6dfec098dae5eda9afb4db942266 95 Gene3D G3DSA:2.40.50.220 1 95 1.3E-30 T 14-10-2018 IPR036677 EutN/Ccml superfamily Tlie_0207 10dd6dfec098dae5eda9afb4db942266 95 SUPERFAMILY SSF159133 1 93 1.96E-26 T 14-10-2018 IPR036677 EutN/Ccml superfamily Tlie_0207 10dd6dfec098dae5eda9afb4db942266 95 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 89 1.0E-30 T 14-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Tlie_0207 10dd6dfec098dae5eda9afb4db942266 95 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 94 5.0E-4 T 14-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Tlie_1732 0d8b101e14c3338fa4e261edb594d4af 490 SUPERFAMILY SSF53686 81 392 9.05E-42 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tlie_1732 0d8b101e14c3338fa4e261edb594d4af 490 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 103 381 5.7E-11 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tlie_1732 0d8b101e14c3338fa4e261edb594d4af 490 Gene3D G3DSA:3.40.50.1100 205 393 1.6E-26 T 14-10-2018 Tlie_1732 0d8b101e14c3338fa4e261edb594d4af 490 Gene3D G3DSA:3.40.50.1100 101 204 1.7E-9 T 14-10-2018 Tlie_0577 74aa24bdf0c51aff165c3145db6ee23e 162 Pfam PF07155 ECF-type riboflavin transporter, S component 7 153 7.6E-30 T 14-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 Tlie_0577 74aa24bdf0c51aff165c3145db6ee23e 162 Gene3D G3DSA:1.10.1760.20 5 157 5.3E-37 T 14-10-2018 Tlie_0533 1aaec8878b16950c8f5f0c3e5e201160 300 Gene3D G3DSA:1.10.443.10 111 296 7.8E-59 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tlie_0533 1aaec8878b16950c8f5f0c3e5e201160 300 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 9 293 51.446 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Tlie_0533 1aaec8878b16950c8f5f0c3e5e201160 300 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 94 5.0E-15 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Tlie_0533 1aaec8878b16950c8f5f0c3e5e201160 300 Pfam PF00589 Phage integrase family 117 279 6.8E-45 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tlie_0533 1aaec8878b16950c8f5f0c3e5e201160 300 Gene3D G3DSA:1.10.150.130 2 110 7.1E-22 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Tlie_0533 1aaec8878b16950c8f5f0c3e5e201160 300 SUPERFAMILY SSF56349 7 284 6.47E-59 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tlie_0868 ab0b11bfee5db500e6485d4673962daf 406 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 7 394 6.3E-116 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Tlie_0868 ab0b11bfee5db500e6485d4673962daf 406 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 395 23.143 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Tlie_0868 ab0b11bfee5db500e6485d4673962daf 406 Pfam PF02601 Exonuclease VII, large subunit 123 339 4.5E-61 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Tlie_0868 ab0b11bfee5db500e6485d4673962daf 406 Pfam PF02601 Exonuclease VII, large subunit 330 392 3.5E-7 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Tlie_0868 ab0b11bfee5db500e6485d4673962daf 406 Pfam PF13742 OB-fold nucleic acid binding domain 5 98 1.6E-20 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 Tlie_0404 61fb6025d7103065b1fef5536014cfc9 519 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 98 112 3.7E-5 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tlie_0404 61fb6025d7103065b1fef5536014cfc9 519 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 168 185 3.7E-5 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tlie_0404 61fb6025d7103065b1fef5536014cfc9 519 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 132 150 3.7E-5 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tlie_0404 61fb6025d7103065b1fef5536014cfc9 519 Gene3D G3DSA:3.90.226.10 6 261 9.0E-97 T 14-10-2018 Tlie_0404 61fb6025d7103065b1fef5536014cfc9 519 SUPERFAMILY SSF52096 229 517 2.58E-90 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tlie_0404 61fb6025d7103065b1fef5536014cfc9 519 Pfam PF01039 Carboxyl transferase domain 31 516 5.7E-198 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Tlie_0404 61fb6025d7103065b1fef5536014cfc9 519 Gene3D G3DSA:3.90.226.10 262 519 5.1E-90 T 14-10-2018 Tlie_0404 61fb6025d7103065b1fef5536014cfc9 519 SUPERFAMILY SSF52096 6 259 1.01E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tlie_0715 fb0db5ccf952e6ef9cd805e55a85eedd 268 PIRSF PIRSF006779 4 266 1.7E-64 T 14-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase Tlie_0715 fb0db5ccf952e6ef9cd805e55a85eedd 268 Gene3D G3DSA:3.40.50.10790 4 165 1.5E-45 T 14-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal Tlie_0715 fb0db5ccf952e6ef9cd805e55a85eedd 268 SUPERFAMILY SSF101852 169 263 3.4E-20 T 14-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal Tlie_0715 fb0db5ccf952e6ef9cd805e55a85eedd 268 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 8 261 1.6E-67 T 14-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase Tlie_0715 fb0db5ccf952e6ef9cd805e55a85eedd 268 SUPERFAMILY SSF102522 6 166 1.57E-42 T 14-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal Tlie_0715 fb0db5ccf952e6ef9cd805e55a85eedd 268 Gene3D G3DSA:2.40.30.90 167 264 4.9E-22 T 14-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal Tlie_0988 f89feeba89952cd3d6213ca6f616949a 324 SUPERFAMILY SSF102114 3 280 1.83E-63 T 14-10-2018 Tlie_0988 f89feeba89952cd3d6213ca6f616949a 324 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 16 27 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_0988 f89feeba89952cd3d6213ca6f616949a 324 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 1 324 2.1E-101 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_0988 f89feeba89952cd3d6213ca6f616949a 324 Pfam PF13394 4Fe-4S single cluster domain 17 100 7.9E-8 T 14-10-2018 Tlie_0988 f89feeba89952cd3d6213ca6f616949a 324 Pfam PF06463 Molybdenum Cofactor Synthesis C 183 310 3.2E-29 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tlie_0988 f89feeba89952cd3d6213ca6f616949a 324 Pfam PF04055 Radical SAM superfamily 14 175 2.9E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_0988 f89feeba89952cd3d6213ca6f616949a 324 SMART SM00729 10 213 5.5E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tlie_0988 f89feeba89952cd3d6213ca6f616949a 324 Gene3D G3DSA:3.20.20.70 1 324 6.4E-82 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_1293 a0c90d80a3b8b8eb736938eb722e5ac4 390 SUPERFAMILY SSF53098 178 330 1.02E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_1293 a0c90d80a3b8b8eb736938eb722e5ac4 390 SUPERFAMILY SSF46689 20 121 6.27E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0948 828be89d9b07abdfdadd3559f1807b37 180 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 16 115 3.3E-26 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Tlie_0948 828be89d9b07abdfdadd3559f1807b37 180 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 24 115 4.9E-20 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Tlie_0948 828be89d9b07abdfdadd3559f1807b37 180 SUPERFAMILY SSF52540 28 117 5.43E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_0948 828be89d9b07abdfdadd3559f1807b37 180 Gene3D G3DSA:3.40.50.300 10 130 5.6E-25 T 14-10-2018 Tlie_0479 3c98da4149b311714015225cf2efd4ac 487 Pfam PF00361 Proton-conducting membrane transporter 123 413 2.0E-66 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_0479 3c98da4149b311714015225cf2efd4ac 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 232 258 5.6E-12 T 14-10-2018 Tlie_0479 3c98da4149b311714015225cf2efd4ac 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 210 231 5.6E-12 T 14-10-2018 Tlie_0479 3c98da4149b311714015225cf2efd4ac 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 5.6E-12 T 14-10-2018 Tlie_0479 3c98da4149b311714015225cf2efd4ac 487 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 302 314 5.6E-12 T 14-10-2018 Tlie_0363 08f933dc09669066436d324d4abbb53a 112 Pfam PF07883 Cupin domain 48 103 2.3E-7 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Tlie_0363 08f933dc09669066436d324d4abbb53a 112 Gene3D G3DSA:2.60.120.10 16 107 7.7E-33 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Tlie_0363 08f933dc09669066436d324d4abbb53a 112 SUPERFAMILY SSF51182 16 109 7.95E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Tlie_1761 6856adbcccc6b7b5a0edd899bd191f50 382 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 74 244 8.1E-14 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Tlie_1761 6856adbcccc6b7b5a0edd899bd191f50 382 SUPERFAMILY SSF53187 71 246 4.79E-18 T 14-10-2018 Tlie_1906 bc53fb46a837106b3960ca7403a37b22 421 Pfam PF01385 Probable transposase 192 271 1.8E-10 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 Tlie_1906 bc53fb46a837106b3960ca7403a37b22 421 Pfam PF07282 Putative transposase DNA-binding domain 318 371 7.1E-13 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tlie_0925 5b6413027e5e8f2b7ae0e793e5ed5a7a 110 SUPERFAMILY SSF103007 13 103 1.57E-15 T 14-10-2018 IPR036746 TT1725-like superfamily Tlie_0925 5b6413027e5e8f2b7ae0e793e5ed5a7a 110 Pfam PF04456 Protein of unknown function (DUF503) 13 93 5.6E-20 T 14-10-2018 IPR007546 Protein of unknown function DUF503 Tlie_0925 5b6413027e5e8f2b7ae0e793e5ed5a7a 110 Gene3D G3DSA:3.30.70.1120 9 109 2.0E-15 T 14-10-2018 IPR036746 TT1725-like superfamily Tlie_0310 7d5c6fd2b4dadc525b3012fb42fcdc76 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 412 4.6E-125 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tlie_0310 7d5c6fd2b4dadc525b3012fb42fcdc76 425 PIRSF PIRSF006066 1 425 5.1E-165 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_0310 7d5c6fd2b4dadc525b3012fb42fcdc76 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 419 3.7E-140 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tlie_1131 5472b46399d4daeb9c6e45f27aff95c8 264 Pfam PF02616 Segregation and condensation protein ScpA 24 251 4.8E-11 T 14-10-2018 IPR003768 Segregation and condensation protein A Tlie_0253 79a7d17e0d560e254779c04a87a59166 306 Pfam PF00892 EamA-like transporter family 16 148 5.3E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tlie_0253 79a7d17e0d560e254779c04a87a59166 306 Pfam PF00892 EamA-like transporter family 162 300 6.4E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tlie_0253 79a7d17e0d560e254779c04a87a59166 306 SUPERFAMILY SSF103481 48 151 5.23E-13 T 14-10-2018 Tlie_0253 79a7d17e0d560e254779c04a87a59166 306 SUPERFAMILY SSF103481 204 301 1.7E-11 T 14-10-2018 Tlie_0040 33ebb8052c518bddfd3f08e225c63256 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 289 3.5E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tlie_0040 33ebb8052c518bddfd3f08e225c63256 291 Gene3D G3DSA:1.10.3720.10 64 290 1.7E-36 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_0040 33ebb8052c518bddfd3f08e225c63256 291 SUPERFAMILY SSF161098 12 285 1.31E-37 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_0040 33ebb8052c518bddfd3f08e225c63256 291 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 9 288 4.0E-82 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Tlie_0789 e80b61b54ec299fa6afdbba3f07229b9 262 Gene3D G3DSA:3.40.50.1220 18 252 7.0E-72 T 14-10-2018 Tlie_0789 e80b61b54ec299fa6afdbba3f07229b9 262 SUPERFAMILY SSF52467 15 254 7.01E-78 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Tlie_0789 e80b61b54ec299fa6afdbba3f07229b9 262 Gene3D G3DSA:3.30.1600.10 38 182 7.0E-72 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily Tlie_0789 e80b61b54ec299fa6afdbba3f07229b9 262 Pfam PF02146 Sir2 family 32 208 3.9E-53 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 Tlie_0304 418b861eb00cb85306b726dbb33e12b8 404 SUPERFAMILY SSF46689 20 121 6.81E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0304 418b861eb00cb85306b726dbb33e12b8 404 SUPERFAMILY SSF53098 178 330 1.11E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_0902 66cbdcecedf500096bec434765a4eb78 163 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 13 149 2.0E-51 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tlie_0902 66cbdcecedf500096bec434765a4eb78 163 Gene3D G3DSA:3.40.50.960 1 154 1.6E-62 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tlie_0902 66cbdcecedf500096bec434765a4eb78 163 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 12 150 2.3E-57 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tlie_0902 66cbdcecedf500096bec434765a4eb78 163 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 30.174 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tlie_0902 66cbdcecedf500096bec434765a4eb78 163 SUPERFAMILY SSF52121 4 156 1.57E-60 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tlie_1589 34ac794d61f1ff7ca3c531d42f6d031b 388 Gene3D G3DSA:3.30.70.360 166 280 1.9E-65 T 14-10-2018 Tlie_1589 34ac794d61f1ff7ca3c531d42f6d031b 388 SUPERFAMILY SSF53187 7 372 1.48E-35 T 14-10-2018 Tlie_1589 34ac794d61f1ff7ca3c531d42f6d031b 388 Gene3D G3DSA:3.40.630.10 20 358 1.9E-65 T 14-10-2018 Tlie_1589 34ac794d61f1ff7ca3c531d42f6d031b 388 PIRSF PIRSF037226 3 388 5.3E-72 T 14-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted Tlie_0909 298f7ced1693a7c120d00d2c0531ca7b 212 SUPERFAMILY SSF160527 89 197 3.14E-9 T 14-10-2018 Tlie_0909 298f7ced1693a7c120d00d2c0531ca7b 212 Gene3D G3DSA:3.30.2320.30 111 201 1.7E-14 T 14-10-2018 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0909 298f7ced1693a7c120d00d2c0531ca7b 212 Pfam PF01991 ATP synthase (E/31 kDa) subunit 20 196 7.6E-6 T 14-10-2018 IPR002842 V-type ATPase subunit E GO:0015991|GO:0033178|GO:0046961 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0882 7fc584155db7a662f690d0ade9c69e7f 73 SUPERFAMILY SSF54862 4 69 7.61E-15 T 14-10-2018 Tlie_0882 7fc584155db7a662f690d0ade9c69e7f 73 Gene3D G3DSA:3.30.70.3270 41 73 1.5E-5 T 14-10-2018 Tlie_0882 7fc584155db7a662f690d0ade9c69e7f 73 Gene3D G3DSA:3.30.70.20 1 40 1.4E-6 T 14-10-2018 Tlie_0882 7fc584155db7a662f690d0ade9c69e7f 73 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 49 60 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_0882 7fc584155db7a662f690d0ade9c69e7f 73 Pfam PF12838 4Fe-4S dicluster domain 13 62 5.1E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_1767 81c3ccc54476c1f35d913251fc036287 207 Gene3D G3DSA:3.40.50.2300 2 126 3.0E-26 T 14-10-2018 Tlie_1767 81c3ccc54476c1f35d913251fc036287 207 SMART SM00448 3 114 1.1E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_1767 81c3ccc54476c1f35d913251fc036287 207 SUPERFAMILY SSF52172 7 125 9.68E-27 T 14-10-2018 IPR011006 CheY-like superfamily Tlie_1767 81c3ccc54476c1f35d913251fc036287 207 SUPERFAMILY SSF46785 154 205 1.08E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1767 81c3ccc54476c1f35d913251fc036287 207 Pfam PF00072 Response regulator receiver domain 8 114 1.9E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tlie_0754 961cee3af9f27c17870b07c476e480cd 83 Gene3D G3DSA:2.60.40.50 3 80 5.7E-37 T 14-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily Tlie_0754 961cee3af9f27c17870b07c476e480cd 83 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 30 46 1.1E-27 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 Tlie_0754 961cee3af9f27c17870b07c476e480cd 83 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 13 30 1.1E-27 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 Tlie_0754 961cee3af9f27c17870b07c476e480cd 83 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 62 78 1.1E-27 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 Tlie_0754 961cee3af9f27c17870b07c476e480cd 83 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 46 62 1.1E-27 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 Tlie_0754 961cee3af9f27c17870b07c476e480cd 83 SUPERFAMILY SSF51219 12 78 2.62E-29 T 14-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily Tlie_0754 961cee3af9f27c17870b07c476e480cd 83 Pfam PF02081 Tryptophan RNA-binding attenuator protein 10 76 7.8E-38 T 14-10-2018 IPR023558 Tryptophan RNA-binding attenuator protein domain Tlie_0621 6916c3c7322c4053fb168bab6512e0e4 259 Gene3D G3DSA:2.40.10.340 106 251 4.4E-30 T 14-10-2018 Tlie_0621 6916c3c7322c4053fb168bab6512e0e4 259 Pfam PF04085 rod shape-determining protein MreC 108 251 8.3E-29 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Tlie_0621 6916c3c7322c4053fb168bab6512e0e4 259 Gene3D G3DSA:2.40.10.350 165 240 4.4E-30 T 14-10-2018 Tlie_1205 b1351405007a1da16ce61bd2c94501b0 521 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 89 114 1.5E-15 T 14-10-2018 Tlie_1205 b1351405007a1da16ce61bd2c94501b0 521 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 164 185 1.5E-15 T 14-10-2018 Tlie_1205 b1351405007a1da16ce61bd2c94501b0 521 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 117 137 1.5E-15 T 14-10-2018 Tlie_1205 b1351405007a1da16ce61bd2c94501b0 521 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 436 455 1.5E-15 T 14-10-2018 Tlie_1205 b1351405007a1da16ce61bd2c94501b0 521 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 320 332 1.5E-15 T 14-10-2018 Tlie_1205 b1351405007a1da16ce61bd2c94501b0 521 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 227 248 1.5E-15 T 14-10-2018 Tlie_1205 b1351405007a1da16ce61bd2c94501b0 521 Pfam PF00361 Proton-conducting membrane transporter 141 443 1.9E-58 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_1886 02c0469285683ac9d7ad2465bc847282 330 SUPERFAMILY SSF64182 3 300 3.05E-19 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily Tlie_1886 02c0469285683ac9d7ad2465bc847282 330 Pfam PF02272 DHHA1 domain 191 311 8.8E-7 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Tlie_1592 eb1787c9eee225e8be2010bd20f14dc6 270 PIRSF PIRSF000090 1 262 5.5E-80 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Tlie_1592 eb1787c9eee225e8be2010bd20f14dc6 270 SMART SM00893 22 212 2.1E-54 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Tlie_1592 eb1787c9eee225e8be2010bd20f14dc6 270 Gene3D G3DSA:3.40.50.620 2 262 1.7E-90 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_1592 eb1787c9eee225e8be2010bd20f14dc6 270 SUPERFAMILY SSF52402 3 256 4.12E-73 T 14-10-2018 Tlie_1592 eb1787c9eee225e8be2010bd20f14dc6 270 Pfam PF01012 Electron transfer flavoprotein domain 23 204 6.3E-50 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Tlie_0455 9c3d5d7f43cd1874512868bfce257b36 288 SUPERFAMILY SSF51556 1 275 1.32E-40 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tlie_0455 9c3d5d7f43cd1874512868bfce257b36 288 Gene3D G3DSA:3.20.20.140 1 278 1.3E-45 T 14-10-2018 Tlie_0455 9c3d5d7f43cd1874512868bfce257b36 288 Pfam PF04909 Amidohydrolase 3 274 7.4E-24 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tlie_0483 3dcb7e34f574e48f20f8fe8ad87091ac 394 Gene3D G3DSA:1.10.3720.10 167 374 5.3E-29 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_0483 3dcb7e34f574e48f20f8fe8ad87091ac 394 SUPERFAMILY SSF161098 170 369 1.57E-32 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_0483 3dcb7e34f574e48f20f8fe8ad87091ac 394 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 191 381 1.5E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tlie_1795 b3ba6b41707c49df76e1f1968027a3b4 241 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 217 1.5E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tlie_1795 b3ba6b41707c49df76e1f1968027a3b4 241 SUPERFAMILY SSF161098 19 205 2.75E-42 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_1795 b3ba6b41707c49df76e1f1968027a3b4 241 Gene3D G3DSA:1.10.3720.10 19 212 1.7E-32 T 14-10-2018 IPR035906 MetI-like superfamily Tlie_1879 5484fd146f4154ebd682c3e9023f098b 243 Gene3D G3DSA:2.40.50.90 5 147 1.4E-36 T 14-10-2018 IPR035437 SNase-like, OB-fold superfamily Tlie_1879 5484fd146f4154ebd682c3e9023f098b 243 SUPERFAMILY SSF50199 10 144 1.7E-28 T 14-10-2018 Tlie_1879 5484fd146f4154ebd682c3e9023f098b 243 SMART SM00318 8 144 3.4E-22 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 Tlie_1879 5484fd146f4154ebd682c3e9023f098b 243 ProSitePatterns PS01284 Thermonuclease family signature 2. 82 92 - T 14-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 Tlie_1879 5484fd146f4154ebd682c3e9023f098b 243 Pfam PF00565 Staphylococcal nuclease homologue 34 143 9.6E-19 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 Tlie_1211 fad94b98d45ec4700f1ce2899f7a4340 86 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 83 1.3E-17 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Tlie_0192 4107f96d900e8943971bd055f88f5138 111 SMART SM00877 39 111 1.3E-13 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0192 4107f96d900e8943971bd055f88f5138 111 Pfam PF00936 BMC domain 40 102 3.2E-12 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0192 4107f96d900e8943971bd055f88f5138 111 SUPERFAMILY SSF143414 39 100 1.03E-11 T 14-10-2018 IPR037233 CcmK-like superfamily Tlie_0192 4107f96d900e8943971bd055f88f5138 111 PIRSF PIRSF012296 1 111 1.3E-46 T 14-10-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 Tlie_0192 4107f96d900e8943971bd055f88f5138 111 Gene3D G3DSA:3.30.70.1710 1 111 3.2E-45 T 14-10-2018 Tlie_0136 3d5c77ae48d8697077bc1697e90e398f 175 Pfam PF01584 CheW-like domain 24 157 3.0E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tlie_0136 3d5c77ae48d8697077bc1697e90e398f 175 Gene3D G3DSA:2.30.30.40 25 149 3.6E-30 T 14-10-2018 Tlie_0136 3d5c77ae48d8697077bc1697e90e398f 175 Gene3D G3DSA:2.40.50.180 40 155 3.6E-30 T 14-10-2018 Tlie_0136 3d5c77ae48d8697077bc1697e90e398f 175 SUPERFAMILY SSF50341 22 156 7.46E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Tlie_0136 3d5c77ae48d8697077bc1697e90e398f 175 SMART SM00260 19 155 4.3E-27 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tlie_0783 10715db6e4acf25bbabb062dccfc4b9e 687 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 685 2.1E-211 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0783 10715db6e4acf25bbabb062dccfc4b9e 687 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 685 25.267 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0783 10715db6e4acf25bbabb062dccfc4b9e 687 Pfam PF05746 DALR anticodon binding domain 581 678 5.8E-12 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Tlie_0783 10715db6e4acf25bbabb062dccfc4b9e 687 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 7.7E-34 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0783 10715db6e4acf25bbabb062dccfc4b9e 687 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 7.7E-34 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0783 10715db6e4acf25bbabb062dccfc4b9e 687 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 7.7E-34 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0783 10715db6e4acf25bbabb062dccfc4b9e 687 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 395 414 7.7E-34 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0783 10715db6e4acf25bbabb062dccfc4b9e 687 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 7.7E-34 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_0783 10715db6e4acf25bbabb062dccfc4b9e 687 SUPERFAMILY SSF109604 342 490 2.04E-10 T 14-10-2018 Tlie_0783 10715db6e4acf25bbabb062dccfc4b9e 687 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 546 4.0E-202 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tlie_1807 77228ae07a22685710932933f5223df1 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 51 4.0E-11 T 14-10-2018 Tlie_1807 77228ae07a22685710932933f5223df1 83 SUPERFAMILY SSF143120 5 69 9.59E-12 T 14-10-2018 IPR036165 YefM-like superfamily Tlie_1807 77228ae07a22685710932933f5223df1 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 70 1.6E-13 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Tlie_1807 77228ae07a22685710932933f5223df1 83 Gene3D G3DSA:3.40.1620.10 1 41 4.3E-8 T 14-10-2018 Tlie_0526 f0038d152d52e00e345df0d7daf46410 186 Gene3D G3DSA:3.30.420.10 1 186 1.5E-70 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tlie_0526 f0038d152d52e00e345df0d7daf46410 186 SUPERFAMILY SSF53098 3 184 2.12E-62 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_0526 f0038d152d52e00e345df0d7daf46410 186 Hamap MF_00052_B Ribonuclease HII [rnhB]. 2 186 34.951 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 Tlie_0526 f0038d152d52e00e345df0d7daf46410 186 Pfam PF01351 Ribonuclease HII 4 184 1.5E-40 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain Tlie_0958 d03a76333ac27953b8f34a611e634d00 181 SUPERFAMILY SSF53323 4 180 6.41E-37 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tlie_0958 d03a76333ac27953b8f34a611e634d00 181 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 13 177 7.4E-32 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Tlie_0958 d03a76333ac27953b8f34a611e634d00 181 Gene3D G3DSA:3.40.920.10 1 180 9.6E-57 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tlie_1627 8224c767956ffd30afb4069581d1c1d0 148 SUPERFAMILY SSF55874 39 139 6.02E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_1627 8224c767956ffd30afb4069581d1c1d0 148 Pfam PF13581 Histidine kinase-like ATPase domain 25 136 1.9E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tlie_1627 8224c767956ffd30afb4069581d1c1d0 148 Gene3D G3DSA:3.30.565.10 18 140 1.2E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tlie_1738 54469d24878575fddf4dc68efb2df2df 276 Gene3D G3DSA:3.40.190.10 105 222 3.5E-96 T 14-10-2018 Tlie_1738 54469d24878575fddf4dc68efb2df2df 276 Gene3D G3DSA:3.40.190.10 30 259 3.5E-96 T 14-10-2018 Tlie_1738 54469d24878575fddf4dc68efb2df2df 276 SUPERFAMILY SSF53850 33 261 3.11E-31 T 14-10-2018 Tlie_1738 54469d24878575fddf4dc68efb2df2df 276 Pfam PF12849 PBP superfamily domain 25 253 7.5E-33 T 14-10-2018 IPR024370 PBP domain Tlie_1232 f5a374af271b06e693ccf3c14131b4c2 169 Gene3D G3DSA:1.10.10.10 79 164 3.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1232 f5a374af271b06e693ccf3c14131b4c2 169 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 82 163 9.7E-27 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Tlie_1232 f5a374af271b06e693ccf3c14131b4c2 169 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 131 137 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Tlie_1232 f5a374af271b06e693ccf3c14131b4c2 169 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 82 162 1.8E-25 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Tlie_1232 f5a374af271b06e693ccf3c14131b4c2 169 SUPERFAMILY SSF46767 82 163 1.07E-26 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Tlie_0614 78c2a055aff6d3f7549b3aea0e4ee98b 477 Pfam PF13353 4Fe-4S single cluster domain 122 218 7.0E-6 T 14-10-2018 Tlie_0614 78c2a055aff6d3f7549b3aea0e4ee98b 477 Pfam PF04055 Radical SAM superfamily 118 248 4.9E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tlie_0614 78c2a055aff6d3f7549b3aea0e4ee98b 477 SUPERFAMILY SSF102114 111 388 1.05E-51 T 14-10-2018 Tlie_0614 78c2a055aff6d3f7549b3aea0e4ee98b 477 Gene3D G3DSA:3.20.20.70 112 389 6.7E-41 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0614 78c2a055aff6d3f7549b3aea0e4ee98b 477 Pfam PF13186 Iron-sulfur cluster-binding domain 334 384 1.2E-5 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tlie_1501 bd97f347321ac21a020315cff0af61a2 175 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 160 1.4E-17 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Tlie_1624 05201cad7e2f8c7b9092ee65a432f237 244 Pfam PF02811 PHP domain 2 102 2.1E-10 T 14-10-2018 IPR004013 PHP domain GO:0003824 Tlie_1624 05201cad7e2f8c7b9092ee65a432f237 244 SUPERFAMILY SSF89550 2 233 2.75E-30 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tlie_1624 05201cad7e2f8c7b9092ee65a432f237 244 SMART SM00481 1 69 3.2E-10 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Tlie_1326 8ce64e0d702860ec7a80549ef1b8cf09 101 Pfam PF04977 Septum formation initiator 13 88 4.8E-8 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC Tlie_0689 c56a5c11ecda7690b28334f578b44f18 72 Pfam PF11823 Protein of unknown function (DUF3343) 3 69 1.8E-21 T 14-10-2018 IPR021778 Domain of unknown function DUF3343 Tlie_1333 dab0dc5cd3c562013117d115cd1dafd9 264 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 236 257 2.7E-11 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Tlie_1333 dab0dc5cd3c562013117d115cd1dafd9 264 Pfam PF00005 ABC transporter 26 185 1.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1333 dab0dc5cd3c562013117d115cd1dafd9 264 SUPERFAMILY SSF52540 8 258 5.0E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1333 dab0dc5cd3c562013117d115cd1dafd9 264 Gene3D G3DSA:3.40.50.300 1 262 1.2E-63 T 14-10-2018 Tlie_1333 dab0dc5cd3c562013117d115cd1dafd9 264 SMART SM00382 34 234 1.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1021 0ddac45ff97baac065631bec28981939 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 266 1.0E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tlie_0756 cf033c46d1dffc43170204039d11cc1b 224 Gene3D G3DSA:3.90.79.10 37 219 3.7E-38 T 14-10-2018 Tlie_0756 cf033c46d1dffc43170204039d11cc1b 224 SUPERFAMILY SSF55811 52 216 2.84E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Tlie_0756 cf033c46d1dffc43170204039d11cc1b 224 Pfam PF00293 NUDIX domain 57 180 1.8E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Tlie_0686 6bb498796e8d04a6e9506952894b2571 144 Gene3D G3DSA:3.40.630.30 9 134 1.8E-26 T 14-10-2018 Tlie_0686 6bb498796e8d04a6e9506952894b2571 144 Pfam PF00583 Acetyltransferase (GNAT) family 23 116 2.9E-13 T 14-10-2018 IPR000182 GNAT domain Tlie_0686 6bb498796e8d04a6e9506952894b2571 144 SUPERFAMILY SSF55729 22 129 5.95E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tlie_0561 bf007c067a32c3e6057cd215a05666c8 400 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 17 191 4.2E-58 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Tlie_0561 bf007c067a32c3e6057cd215a05666c8 400 SUPERFAMILY SSF53756 40 324 1.57E-11 T 14-10-2018 Tlie_0561 bf007c067a32c3e6057cd215a05666c8 400 Gene3D G3DSA:3.40.50.2000 206 378 4.3E-49 T 14-10-2018 Tlie_0561 bf007c067a32c3e6057cd215a05666c8 400 Gene3D G3DSA:3.40.50.11720 16 190 1.4E-44 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Tlie_0764 e169e102f7fa62b9c00ddaf5999f6d13 181 Pfam PF10865 Domain of unknown function (DUF2703) 27 141 8.2E-38 T 14-10-2018 IPR021219 Protein of unknown function DUF2703 Tlie_0176 1c35049a086ecf1d572678bd312a4dcb 444 Pfam PF13641 Glycosyltransferase like family 2 69 302 5.0E-23 T 14-10-2018 Tlie_0176 1c35049a086ecf1d572678bd312a4dcb 444 Gene3D G3DSA:3.90.550.10 55 294 5.0E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_0176 1c35049a086ecf1d572678bd312a4dcb 444 SUPERFAMILY SSF53448 68 347 6.19E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_0180 303b492625423ed08abe05ff848f426e 230 SUPERFAMILY SSF54862 152 220 2.51E-7 T 14-10-2018 Tlie_0180 303b492625423ed08abe05ff848f426e 230 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 157 168 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tlie_0180 303b492625423ed08abe05ff848f426e 230 Pfam PF13237 4Fe-4S dicluster domain 153 218 7.8E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tlie_0355 8a85ed9d475357345e12332c96854307 397 Gene3D G3DSA:1.20.1250.20 12 391 1.3E-69 T 14-10-2018 Tlie_0355 8a85ed9d475357345e12332c96854307 397 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 8.9E-8 T 14-10-2018 Tlie_0355 8a85ed9d475357345e12332c96854307 397 PRINTS PR01036 Tetracycline resistance protein TetB signature 112 132 8.9E-8 T 14-10-2018 Tlie_0355 8a85ed9d475357345e12332c96854307 397 PRINTS PR01036 Tetracycline resistance protein TetB signature 21 45 8.9E-8 T 14-10-2018 Tlie_0355 8a85ed9d475357345e12332c96854307 397 Pfam PF07690 Major Facilitator Superfamily 22 307 8.2E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tlie_0355 8a85ed9d475357345e12332c96854307 397 SUPERFAMILY SSF103473 18 396 2.88E-70 T 14-10-2018 IPR036259 MFS transporter superfamily Tlie_0426 8c135bc701d57ed62bdba31d3d6c0837 260 Pfam PF10646 Sporulation and spore germination 136 243 4.9E-10 T 14-10-2018 IPR019606 GerMN domain Tlie_0426 8c135bc701d57ed62bdba31d3d6c0837 260 SMART SM00909 160 247 2.3E-8 T 14-10-2018 IPR019606 GerMN domain Tlie_1431 18a111ee2125b40a36113d7d5bb9901d 329 PIRSF PIRSF001220 1 328 4.1E-65 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Tlie_1431 18a111ee2125b40a36113d7d5bb9901d 329 Gene3D G3DSA:3.40.50.1170 3 207 8.2E-44 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 Tlie_1431 18a111ee2125b40a36113d7d5bb9901d 329 Gene3D G3DSA:3.40.50.40 209 326 6.3E-26 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 Tlie_1431 18a111ee2125b40a36113d7d5bb9901d 329 PRINTS PR00139 Asparaginase/glutaminase family signature 82 100 9.2E-12 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Tlie_1431 18a111ee2125b40a36113d7d5bb9901d 329 PRINTS PR00139 Asparaginase/glutaminase family signature 7 18 9.2E-12 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Tlie_1431 18a111ee2125b40a36113d7d5bb9901d 329 PRINTS PR00139 Asparaginase/glutaminase family signature 257 275 9.2E-12 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Tlie_1431 18a111ee2125b40a36113d7d5bb9901d 329 PIRSF PIRSF500176 3 329 2.6E-61 T 14-10-2018 Tlie_1431 18a111ee2125b40a36113d7d5bb9901d 329 SUPERFAMILY SSF53774 3 327 3.01E-74 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 Tlie_1431 18a111ee2125b40a36113d7d5bb9901d 329 Pfam PF00710 Asparaginase, N-terminal 6 195 2.2E-37 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 Tlie_1431 18a111ee2125b40a36113d7d5bb9901d 329 SMART SM00870 6 322 3.5E-80 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Tlie_0830 fa1fe51b329c81f65b0e57f01548d133 263 Gene3D G3DSA:3.20.20.70 1 261 3.2E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0830 fa1fe51b329c81f65b0e57f01548d133 263 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 44.931 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Tlie_0830 fa1fe51b329c81f65b0e57f01548d133 263 SUPERFAMILY SSF51366 1 251 2.28E-79 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tlie_0830 fa1fe51b329c81f65b0e57f01548d133 263 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 6.0E-105 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Tlie_0830 fa1fe51b329c81f65b0e57f01548d133 263 Pfam PF00977 Histidine biosynthesis protein 5 234 1.5E-81 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Tlie_1108 af965f21892a83dd9900e8291e856d9b 188 Pfam PF02620 Uncharacterized ACR, COG1399 67 182 1.2E-27 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Tlie_1363 8f8da0c9ff1444119edb57e32ef17d2b 56 Gene3D G3DSA:2.20.28.30 1 35 5.0E-7 T 14-10-2018 Tlie_0737 f423789ad35afc8dd1e41ca8fda09629 200 Pfam PF02674 Colicin V production protein 7 147 1.4E-21 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Tlie_1456 055e962b456913a756dcf94f7b31423f 498 ProSitePatterns PS01303 BCCT family of transporters signature. 313 322 - T 14-10-2018 IPR018093 BCCT transporter, conserved site Tlie_1456 055e962b456913a756dcf94f7b31423f 498 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 10 495 1.7E-190 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Tlie_1456 055e962b456913a756dcf94f7b31423f 498 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 48 495 3.1E-156 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Tlie_0342 79e66f1f79fa643c61580780304aa28a 369 Pfam PF12323 Helix-turn-helix domain 1 45 8.9E-22 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain Tlie_0342 79e66f1f79fa643c61580780304aa28a 369 Pfam PF01385 Probable transposase 166 278 9.8E-30 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 Tlie_0342 79e66f1f79fa643c61580780304aa28a 369 Pfam PF07282 Putative transposase DNA-binding domain 292 360 4.3E-24 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tlie_0342 79e66f1f79fa643c61580780304aa28a 369 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 246 319 1.2E-10 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tlie_0184 0b1926a7524a9fa534fc1cb5be6295d0 408 Gene3D G3DSA:3.20.20.70 29 329 4.8E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tlie_0184 0b1926a7524a9fa534fc1cb5be6295d0 408 SUPERFAMILY SSF51569 26 305 6.59E-76 T 14-10-2018 Tlie_0184 0b1926a7524a9fa534fc1cb5be6295d0 408 Pfam PF00682 HMGL-like 29 288 1.9E-62 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Tlie_0184 0b1926a7524a9fa534fc1cb5be6295d0 408 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 37 53 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tlie_0475 9061d34f8a6d2fbf10ce9e5ec46c5fc4 115 Pfam PF03334 Na+/H+ antiporter subunit 13 92 1.9E-26 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Tlie_0475 9061d34f8a6d2fbf10ce9e5ec46c5fc4 115 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 13 105 1.1E-28 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Tlie_1377 fad322a78c108eb5eeb7cce0b866d987 80 Pfam PF14209 Domain of unknown function (DUF4321) 34 77 6.7E-10 T 14-10-2018 IPR025470 Protein of unknown function DUF4321 Tlie_1112 6671bcd3c35d31c22416fa2e6bdf4cae 174 Gene3D G3DSA:3.40.50.150 1 171 5.5E-41 T 14-10-2018 Tlie_1112 6671bcd3c35d31c22416fa2e6bdf4cae 174 SUPERFAMILY SSF53335 2 167 1.15E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_1112 6671bcd3c35d31c22416fa2e6bdf4cae 174 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 101 107 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tlie_1112 6671bcd3c35d31c22416fa2e6bdf4cae 174 PIRSF PIRSF004553 1 169 7.1E-36 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Tlie_1112 6671bcd3c35d31c22416fa2e6bdf4cae 174 Pfam PF03602 Conserved hypothetical protein 95 2 167 3.4E-37 T 14-10-2018 Tlie_1545 3df89a0f94f64314783360365bf33b6b 81 Gene3D G3DSA:2.30.30.90 4 81 8.1E-15 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain Tlie_1545 3df89a0f94f64314783360365bf33b6b 81 SMART SM00899 3 74 5.2E-13 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Tlie_1545 3df89a0f94f64314783360365bf33b6b 81 SUPERFAMILY SSF50037 5 75 2.52E-13 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal Tlie_1545 3df89a0f94f64314783360365bf33b6b 81 Pfam PF04023 FeoA domain 5 74 8.3E-14 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Tlie_1720 a07b2a18fdc39ce155085c79f5691c7e 148 SUPERFAMILY SSF46785 4 137 9.36E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1720 a07b2a18fdc39ce155085c79f5691c7e 148 Pfam PF12802 MarR family 33 87 2.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tlie_1720 a07b2a18fdc39ce155085c79f5691c7e 148 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Tlie_1720 a07b2a18fdc39ce155085c79f5691c7e 148 Gene3D G3DSA:1.10.10.10 2 138 5.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tlie_1720 a07b2a18fdc39ce155085c79f5691c7e 148 SMART SM00347 23 123 1.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tlie_1720 a07b2a18fdc39ce155085c79f5691c7e 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 2.7E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tlie_1720 a07b2a18fdc39ce155085c79f5691c7e 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 2.7E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tlie_1720 a07b2a18fdc39ce155085c79f5691c7e 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 2.7E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tlie_1720 a07b2a18fdc39ce155085c79f5691c7e 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 2.7E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tlie_0566 ad2a761531ddf37d388d1ab1ec62f6d2 326 Gene3D G3DSA:3.40.50.2000 9 135 1.7E-28 T 14-10-2018 Tlie_0566 ad2a761531ddf37d388d1ab1ec62f6d2 326 Gene3D G3DSA:3.40.50.2000 150 326 2.1E-32 T 14-10-2018 Tlie_0566 ad2a761531ddf37d388d1ab1ec62f6d2 326 SUPERFAMILY SSF53756 13 324 3.24E-62 T 14-10-2018 Tlie_0566 ad2a761531ddf37d388d1ab1ec62f6d2 326 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 82 291 1.9E-24 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Tlie_0496 c84462029f3fa208d7aa3aa8f5691863 428 PRINTS PR00173 Glutamate-aspartate symporter signature 337 356 9.6E-48 T 14-10-2018 Tlie_0496 c84462029f3fa208d7aa3aa8f5691863 428 PRINTS PR00173 Glutamate-aspartate symporter signature 364 384 9.6E-48 T 14-10-2018 Tlie_0496 c84462029f3fa208d7aa3aa8f5691863 428 PRINTS PR00173 Glutamate-aspartate symporter signature 302 328 9.6E-48 T 14-10-2018 Tlie_0496 c84462029f3fa208d7aa3aa8f5691863 428 PRINTS PR00173 Glutamate-aspartate symporter signature 52 72 9.6E-48 T 14-10-2018 Tlie_0496 c84462029f3fa208d7aa3aa8f5691863 428 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 9.6E-48 T 14-10-2018 Tlie_0496 c84462029f3fa208d7aa3aa8f5691863 428 PRINTS PR00173 Glutamate-aspartate symporter signature 201 220 9.6E-48 T 14-10-2018 Tlie_0496 c84462029f3fa208d7aa3aa8f5691863 428 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 9.6E-48 T 14-10-2018 Tlie_0496 c84462029f3fa208d7aa3aa8f5691863 428 SUPERFAMILY SSF118215 17 418 7.06E-123 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Tlie_0496 c84462029f3fa208d7aa3aa8f5691863 428 Pfam PF00375 Sodium:dicarboxylate symporter family 17 416 1.5E-125 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Tlie_0496 c84462029f3fa208d7aa3aa8f5691863 428 Gene3D G3DSA:1.10.3860.10 6 428 1.4E-152 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Tlie_0496 c84462029f3fa208d7aa3aa8f5691863 428 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 44 59 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site Tlie_0865 0dc5779e6aa7805159cfb514482884b2 162 Pfam PF03780 Asp23 family, cell envelope-related function 29 133 5.9E-24 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 Tlie_1241 05a71cbfecbee9e9a1b4951839e96174 315 SUPERFAMILY SSF101960 62 314 2.62E-43 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Tlie_1241 05a71cbfecbee9e9a1b4951839e96174 315 Pfam PF01458 Uncharacterized protein family (UPF0051) 92 312 1.5E-34 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 Tlie_0569 7a3f629e18447fc18e18447fc8e76d21 348 Gene3D G3DSA:3.90.550.10 1 263 3.3E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_0569 7a3f629e18447fc18e18447fc8e76d21 348 Pfam PF00535 Glycosyl transferase family 2 9 179 8.0E-33 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tlie_0569 7a3f629e18447fc18e18447fc8e76d21 348 SUPERFAMILY SSF53448 7 236 5.0E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_0774 c27c6dae831cebf558cb06325492734e 78 Gene3D G3DSA:3.30.300.130 2 76 3.1E-27 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Tlie_0774 c27c6dae831cebf558cb06325492734e 78 SUPERFAMILY SSF117916 3 76 8.5E-22 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Tlie_0774 c27c6dae831cebf558cb06325492734e 78 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 13 75 1.0E-13 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Tlie_0774 c27c6dae831cebf558cb06325492734e 78 Pfam PF01106 NifU-like domain 7 75 9.4E-27 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Tlie_0873 467f57c61182c2118a0ab31db545dae2 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 2 136 22.439 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Tlie_0873 467f57c61182c2118a0ab31db545dae2 140 Pfam PF03652 Holliday junction resolvase 3 133 1.2E-37 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Tlie_0873 467f57c61182c2118a0ab31db545dae2 140 Gene3D G3DSA:3.30.420.140 1 140 3.2E-41 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Tlie_0873 467f57c61182c2118a0ab31db545dae2 140 SUPERFAMILY SSF53098 1 135 1.43E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_0873 467f57c61182c2118a0ab31db545dae2 140 SMART SM00732 2 101 1.0E-22 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Tlie_0873 467f57c61182c2118a0ab31db545dae2 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 5 133 3.3E-30 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Tlie_1643 02ac8dd38354f081eb2d5f61e8890061 253 Pfam PF02361 Cobalt transport protein 17 221 3.0E-32 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Tlie_1643 02ac8dd38354f081eb2d5f61e8890061 253 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 24 217 1.3E-42 T 14-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 Tlie_1284 52ee14e09ca907b1d36d0b0dc56c4b22 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 448 5.4E-140 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_1284 52ee14e09ca907b1d36d0b0dc56c4b22 458 Pfam PF01235 Sodium:alanine symporter family 56 455 5.5E-135 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_1284 52ee14e09ca907b1d36d0b0dc56c4b22 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 93 108 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_1284 52ee14e09ca907b1d36d0b0dc56c4b22 458 PRINTS PR00175 Sodium/alanine symporter signature 308 326 2.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_1284 52ee14e09ca907b1d36d0b0dc56c4b22 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 2.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_1284 52ee14e09ca907b1d36d0b0dc56c4b22 458 PRINTS PR00175 Sodium/alanine symporter signature 354 376 2.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_1284 52ee14e09ca907b1d36d0b0dc56c4b22 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 2.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_1284 52ee14e09ca907b1d36d0b0dc56c4b22 458 PRINTS PR00175 Sodium/alanine symporter signature 417 437 2.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_1284 52ee14e09ca907b1d36d0b0dc56c4b22 458 PRINTS PR00175 Sodium/alanine symporter signature 93 115 2.7E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_1730 329ec4a71544975d7c934b81f1dd0fde 193 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 158 4.5E-27 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Tlie_1496 1a89a7c34941ca12a29069109b927fda 637 Pfam PF01496 V-type ATPase 116kDa subunit family 531 623 2.2E-12 T 14-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1496 1a89a7c34941ca12a29069109b927fda 637 Pfam PF01496 V-type ATPase 116kDa subunit family 180 371 1.5E-26 T 14-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1487 c3f22c0a4aca4736be9dcccc0ae5ab23 264 Pfam PF07813 LTXXQ motif family protein 44 131 1.9E-8 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 Tlie_1487 c3f22c0a4aca4736be9dcccc0ae5ab23 264 Gene3D G3DSA:1.20.120.1490 41 138 5.1E-9 T 14-10-2018 Tlie_1487 c3f22c0a4aca4736be9dcccc0ae5ab23 264 Gene3D G3DSA:1.20.120.1490 153 260 7.3E-10 T 14-10-2018 Tlie_0881 1ae8ac0a7c2af1c26a82f64ce7ad879a 247 SUPERFAMILY SSF52540 8 214 1.44E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1460 83723364387089645257bed1263e421c 109 PIRSF PIRSF000181 1 109 5.7E-42 T 14-10-2018 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 Tlie_1460 83723364387089645257bed1263e421c 109 Pfam PF04723 Glycine reductase complex selenoprotein A 1 101 1.7E-49 T 14-10-2018 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 Tlie_0104 ab17bcbf59c3fbb329dea0535067f0e9 156 Pfam PF03748 Flagellar basal body-associated protein FliL 52 156 1.4E-7 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Tlie_0632 1366083752287838e49792f5a73ce3ae 246 Pfam PF13847 Methyltransferase domain 39 152 3.1E-11 T 14-10-2018 IPR025714 Methyltransferase domain Tlie_0632 1366083752287838e49792f5a73ce3ae 246 SUPERFAMILY SSF53335 27 234 3.06E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_0632 1366083752287838e49792f5a73ce3ae 246 Gene3D G3DSA:3.40.50.150 4 242 2.5E-61 T 14-10-2018 Tlie_0632 1366083752287838e49792f5a73ce3ae 246 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 115 121 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tlie_1296 1df0b7a8c3ef716ec2a90a48b17b8393 82 Pfam PF01455 HupF/HypC family 1 66 2.9E-18 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Tlie_1296 1df0b7a8c3ef716ec2a90a48b17b8393 82 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 77 2.2E-16 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Tlie_1296 1df0b7a8c3ef716ec2a90a48b17b8393 82 SUPERFAMILY SSF159127 1 77 3.4E-20 T 14-10-2018 IPR037254 HupF/HypC superfamily Tlie_1296 1df0b7a8c3ef716ec2a90a48b17b8393 82 Gene3D G3DSA:2.40.50.970 1 76 3.7E-20 T 14-10-2018 IPR037254 HupF/HypC superfamily Tlie_1815 4ed5a0f0d65cb4db51d57f16577d6f82 421 Pfam PF04932 O-Antigen ligase 189 346 2.8E-10 T 14-10-2018 IPR007016 O-antigen ligase-related Tlie_1870 f3c2cbffd649a2cb41dde674e0371b6b 188 PIRSF PIRSF016661 1 184 1.9E-43 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Tlie_1870 f3c2cbffd649a2cb41dde674e0371b6b 188 Pfam PF02632 BioY family 29 175 5.4E-38 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Tlie_1870 f3c2cbffd649a2cb41dde674e0371b6b 188 Gene3D G3DSA:1.10.1760.20 2 180 2.3E-50 T 14-10-2018 Tlie_1294 5b4d063e92d04a3a968dd068fa8df493 446 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 31 45 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_1294 5b4d063e92d04a3a968dd068fa8df493 446 Pfam PF00209 Sodium:neurotransmitter symporter family 7 123 1.8E-28 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_1294 5b4d063e92d04a3a968dd068fa8df493 446 Pfam PF00209 Sodium:neurotransmitter symporter family 141 443 1.8E-37 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_1294 5b4d063e92d04a3a968dd068fa8df493 446 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 313 333 1.1E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_1294 5b4d063e92d04a3a968dd068fa8df493 446 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 44 63 1.1E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_1294 5b4d063e92d04a3a968dd068fa8df493 446 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 89 115 1.1E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_1294 5b4d063e92d04a3a968dd068fa8df493 446 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 15 36 1.1E-14 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Tlie_1294 5b4d063e92d04a3a968dd068fa8df493 446 SUPERFAMILY SSF161070 7 444 1.44E-148 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 Tlie_1242 0df650f8f0cbd074471d16ac4d9f7153 246 Gene3D G3DSA:3.40.50.300 4 230 7.9E-57 T 14-10-2018 Tlie_1242 0df650f8f0cbd074471d16ac4d9f7153 246 SUPERFAMILY SSF52540 5 227 6.98E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1242 0df650f8f0cbd074471d16ac4d9f7153 246 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tlie_1242 0df650f8f0cbd074471d16ac4d9f7153 246 Pfam PF00005 ABC transporter 21 165 6.4E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tlie_1242 0df650f8f0cbd074471d16ac4d9f7153 246 SMART SM00382 30 221 5.4E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Tlie_1764 43ca94ace262ca6c969bebf12ae91c63 140 Pfam PF14102 Capsule biosynthesis CapC 13 122 5.9E-25 T 14-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 Tlie_0616 71aec29e4213d7c9dfcc3d0909044fac 549 Gene3D G3DSA:3.10.310.30 322 437 1.5E-15 T 14-10-2018 Tlie_0616 71aec29e4213d7c9dfcc3d0909044fac 549 Pfam PF02272 DHHA1 domain 346 426 1.3E-8 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Tlie_0616 71aec29e4213d7c9dfcc3d0909044fac 549 Pfam PF01368 DHH family 86 189 7.0E-9 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tlie_0616 71aec29e4213d7c9dfcc3d0909044fac 549 Gene3D G3DSA:3.90.1640.30 60 321 2.3E-65 T 14-10-2018 Tlie_0616 71aec29e4213d7c9dfcc3d0909044fac 549 SUPERFAMILY SSF64182 64 436 5.49E-77 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily Tlie_0330 02cb74284178cb7fc83b9390fcd5f147 389 Pfam PF03773 Predicted permease 37 385 7.7E-80 T 14-10-2018 IPR005524 Predicted permease DUF318 Tlie_1503 9394888c129bd47eb8885f812fbd5a94 392 SUPERFAMILY SSF53098 178 330 1.03E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_1503 9394888c129bd47eb8885f812fbd5a94 392 SUPERFAMILY SSF46689 20 121 6.27E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0478 35f39889fa7975d3f50d37d2ff105edc 111 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 107 8.4E-29 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Tlie_0115 4241a525405be18aa9d5f36838a2b0b4 152 Pfam PF05130 FlgN protein 1 136 1.9E-7 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 Tlie_1521 b58c1c3c089df59b4c225a2eb206960e 318 Pfam PF01548 Transposase 5 113 1.8E-10 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tlie_1521 b58c1c3c089df59b4c225a2eb206960e 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 191 276 8.8E-23 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tlie_0382 b58c1c3c089df59b4c225a2eb206960e 318 Pfam PF01548 Transposase 5 113 1.8E-10 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tlie_0382 b58c1c3c089df59b4c225a2eb206960e 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 191 276 8.8E-23 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tlie_0175 b58c1c3c089df59b4c225a2eb206960e 318 Pfam PF01548 Transposase 5 113 1.8E-10 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tlie_0175 b58c1c3c089df59b4c225a2eb206960e 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 191 276 8.8E-23 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tlie_1459 fc99957cab43245fbf0e423eefa73baf 436 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 1 433 4.1E-183 T 14-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 Tlie_0814 411e0146e3aebc26e27920d867bbb46b 215 Pfam PF01435 Peptidase family M48 38 204 1.7E-26 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Tlie_0814 411e0146e3aebc26e27920d867bbb46b 215 Gene3D G3DSA:3.30.2010.10 26 110 6.6E-10 T 14-10-2018 Tlie_0751 f99c80e4b9b9c6d0e420cc727d151b82 361 Gene3D G3DSA:3.30.2010.10 56 134 4.4E-7 T 14-10-2018 Tlie_0751 f99c80e4b9b9c6d0e420cc727d151b82 361 Pfam PF01435 Peptidase family M48 62 232 1.1E-27 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Tlie_0201 1bb4a6d40b0ccc688949cd0909eea68d 196 Pfam PF00936 BMC domain 7 83 6.4E-22 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0201 1bb4a6d40b0ccc688949cd0909eea68d 196 SUPERFAMILY SSF143414 6 95 9.55E-23 T 14-10-2018 IPR037233 CcmK-like superfamily Tlie_0201 1bb4a6d40b0ccc688949cd0909eea68d 196 Gene3D G3DSA:3.30.70.1710 2 105 4.2E-28 T 14-10-2018 Tlie_0201 1bb4a6d40b0ccc688949cd0909eea68d 196 SMART SM00877 6 83 4.1E-24 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tlie_0911 7f198a69f6c95c92cdd2db8fa833b6b1 90 SUPERFAMILY SSF159468 6 82 2.62E-9 T 14-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0911 7f198a69f6c95c92cdd2db8fa833b6b1 90 Gene3D G3DSA:3.40.50.10580 1 87 4.1E-6 T 14-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_1027 ae8427fdc78f3c63882776a778e4053e 164 Pfam PF08279 HTH domain 97 132 3.0E-6 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Tlie_1027 ae8427fdc78f3c63882776a778e4053e 164 SUPERFAMILY SSF46785 88 133 7.88E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tlie_1374 1d4c0eb62e76232a8268432d16a3d871 341 TIGRFAM TIGR03609 S_layer_CsaB: polysaccharide pyruvyl transferase CsaB 6 303 1.3E-73 T 14-10-2018 IPR019896 Polysaccharide pyruvyl transferase, CsaB Tlie_1374 1d4c0eb62e76232a8268432d16a3d871 341 Pfam PF04230 Polysaccharide pyruvyl transferase 17 286 3.3E-30 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase Tlie_0271 0cabbd96a54bac575226b39087b1b62f 447 PRINTS PR00175 Sodium/alanine symporter signature 411 431 1.4E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_0271 0cabbd96a54bac575226b39087b1b62f 447 PRINTS PR00175 Sodium/alanine symporter signature 185 203 1.4E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_0271 0cabbd96a54bac575226b39087b1b62f 447 PRINTS PR00175 Sodium/alanine symporter signature 352 374 1.4E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_0271 0cabbd96a54bac575226b39087b1b62f 447 PRINTS PR00175 Sodium/alanine symporter signature 94 116 1.4E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_0271 0cabbd96a54bac575226b39087b1b62f 447 PRINTS PR00175 Sodium/alanine symporter signature 213 232 1.4E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_0271 0cabbd96a54bac575226b39087b1b62f 447 PRINTS PR00175 Sodium/alanine symporter signature 308 326 1.4E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_0271 0cabbd96a54bac575226b39087b1b62f 447 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 94 109 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_0271 0cabbd96a54bac575226b39087b1b62f 447 Pfam PF01235 Sodium:alanine symporter family 56 444 3.3E-145 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_0271 0cabbd96a54bac575226b39087b1b62f 447 TIGRFAM TIGR00835 agcS: amino acid carrier protein 15 442 1.4E-151 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tlie_0232 c24d1a74397dba720e6c5c3b283fa9f9 356 Gene3D G3DSA:3.40.50.10770 33 182 9.4E-32 T 14-10-2018 Tlie_0232 c24d1a74397dba720e6c5c3b283fa9f9 356 TIGRFAM TIGR02619 TIGR02619: putative CRISPR-associated protein, APE2256 family 40 177 9.0E-29 T 14-10-2018 IPR013442 CRISPR-associated protein APE2256 Tlie_0232 c24d1a74397dba720e6c5c3b283fa9f9 356 Pfam PF09651 CRISPR-associated protein (Cas_APE2256) 50 178 3.5E-30 T 14-10-2018 IPR013442 CRISPR-associated protein APE2256 Tlie_0203 e5337b8f7b1c9f1226ff84808d1f15e4 217 Pfam PF06130 Phosphate propanoyltransferase 136 202 1.1E-17 T 14-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Tlie_0203 e5337b8f7b1c9f1226ff84808d1f15e4 217 Pfam PF06130 Phosphate propanoyltransferase 27 105 7.7E-28 T 14-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Tlie_0203 e5337b8f7b1c9f1226ff84808d1f15e4 217 PIRSF PIRSF010130 1 213 5.1E-77 T 14-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Tlie_0228 2781762b01f39b0c70231c4fff9d54ce 227 Gene3D G3DSA:1.25.40.10 20 105 2.1E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_0228 2781762b01f39b0c70231c4fff9d54ce 227 SUPERFAMILY SSF81901 24 160 5.69E-27 T 14-10-2018 Tlie_0228 2781762b01f39b0c70231c4fff9d54ce 227 SMART SM00671 31 66 5.1E-10 T 14-10-2018 IPR006597 Sel1-like repeat Tlie_0228 2781762b01f39b0c70231c4fff9d54ce 227 SMART SM00671 104 140 0.0024 T 14-10-2018 IPR006597 Sel1-like repeat Tlie_0228 2781762b01f39b0c70231c4fff9d54ce 227 SMART SM00671 67 103 4.3E-9 T 14-10-2018 IPR006597 Sel1-like repeat Tlie_0228 2781762b01f39b0c70231c4fff9d54ce 227 SMART SM00671 141 179 10.0 T 14-10-2018 IPR006597 Sel1-like repeat Tlie_0228 2781762b01f39b0c70231c4fff9d54ce 227 SMART SM00671 180 215 2.4E-11 T 14-10-2018 IPR006597 Sel1-like repeat Tlie_0228 2781762b01f39b0c70231c4fff9d54ce 227 Pfam PF08238 Sel1 repeat 105 132 0.055 T 14-10-2018 IPR006597 Sel1-like repeat Tlie_0228 2781762b01f39b0c70231c4fff9d54ce 227 Pfam PF08238 Sel1 repeat 31 66 2.1E-8 T 14-10-2018 IPR006597 Sel1-like repeat Tlie_0228 2781762b01f39b0c70231c4fff9d54ce 227 Pfam PF08238 Sel1 repeat 142 178 0.013 T 14-10-2018 IPR006597 Sel1-like repeat Tlie_0228 2781762b01f39b0c70231c4fff9d54ce 227 Pfam PF08238 Sel1 repeat 67 103 1.3E-8 T 14-10-2018 IPR006597 Sel1-like repeat Tlie_0228 2781762b01f39b0c70231c4fff9d54ce 227 Pfam PF08238 Sel1 repeat 180 215 8.8E-11 T 14-10-2018 IPR006597 Sel1-like repeat Tlie_0228 2781762b01f39b0c70231c4fff9d54ce 227 Gene3D G3DSA:1.25.40.10 106 227 1.6E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tlie_0810 124888b1358ccc80496d71a9db679db2 282 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 34 282 1.0E-53 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Tlie_0810 124888b1358ccc80496d71a9db679db2 282 PIRSF PIRSF026649 18 282 4.0E-64 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Tlie_0249 3f0623d45676c022ed436ef61cc3d5df 238 SUPERFAMILY SSF48256 5 224 1.3E-46 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Tlie_0249 3f0623d45676c022ed436ef61cc3d5df 238 Gene3D G3DSA:1.10.580.10 5 134 1.6E-16 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Tlie_0249 3f0623d45676c022ed436ef61cc3d5df 238 Pfam PF00285 Citrate synthase, C-terminal domain 30 221 6.2E-39 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Tlie_0745 d8b649b456d1e79574debdb1cc97631b 324 Pfam PF07136 Protein of unknown function (DUF1385) 73 302 1.2E-79 T 14-10-2018 IPR010787 Protein of unknown function DUF1385 Tlie_0745 d8b649b456d1e79574debdb1cc97631b 324 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 73 303 1.0E-41 T 14-10-2018 IPR010787 Protein of unknown function DUF1385 Tlie_0507 afb6864ad422f7799bab09c7844a201d 78 SUPERFAMILY SSF52833 32 78 7.66E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tlie_0507 afb6864ad422f7799bab09c7844a201d 78 Pfam PF00578 AhpC/TSA family 36 78 2.7E-9 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tlie_0507 afb6864ad422f7799bab09c7844a201d 78 Gene3D G3DSA:3.40.30.10 31 78 2.8E-14 T 14-10-2018 Tlie_1610 51595bf6f6c5423cad649bf4dacb30f4 67 Gene3D G3DSA:3.30.1660.10 1 67 2.6E-29 T 14-10-2018 IPR025543 Dodecin-like Tlie_1610 51595bf6f6c5423cad649bf4dacb30f4 67 Pfam PF07311 Dodecin 4 66 2.6E-26 T 14-10-2018 IPR009923 Dodecin Tlie_1610 51595bf6f6c5423cad649bf4dacb30f4 67 SUPERFAMILY SSF89807 4 66 8.24E-22 T 14-10-2018 IPR036694 Dodecin-like superfamily Tlie_0441 ee43193617a8e9e7467e3458687f60b4 310 Pfam PF12679 ABC-2 family transporter protein 6 307 2.2E-37 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Tlie_0086 4ba922f4f7807def680b75848dde2b39 276 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 185 202 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Tlie_0086 4ba922f4f7807def680b75848dde2b39 276 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 219 1.1E-23 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Tlie_1629 7ef2b2de79c75ed701702832b3fa65d5 143 Pfam PF00011 Hsp20/alpha crystallin family 43 140 8.9E-18 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Tlie_1629 7ef2b2de79c75ed701702832b3fa65d5 143 Gene3D G3DSA:2.60.40.790 6 141 6.3E-27 T 14-10-2018 IPR008978 HSP20-like chaperone Tlie_1629 7ef2b2de79c75ed701702832b3fa65d5 143 SUPERFAMILY SSF49764 18 141 8.97E-28 T 14-10-2018 IPR008978 HSP20-like chaperone Tlie_1832 c33bc73fbc22d3846c51a2520740f8fc 572 Gene3D G3DSA:1.20.1730.10 30 509 3.8E-55 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Tlie_1832 c33bc73fbc22d3846c51a2520740f8fc 572 Pfam PF00474 Sodium:solute symporter family 42 440 2.7E-33 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Tlie_0585 2f18f23c223d7d50e13f6343999fa111 178 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 11 108 2.1E-5 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related Tlie_0152 a72b381f76422faf0ea95b1351260f79 266 SUPERFAMILY SSF81345 3 259 4.45E-36 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tlie_0152 a72b381f76422faf0ea95b1351260f79 266 Gene3D G3DSA:1.10.3470.10 10 265 6.0E-7 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tlie_0152 a72b381f76422faf0ea95b1351260f79 266 Pfam PF00950 ABC 3 transport family 6 262 4.5E-81 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Tlie_1798 8b6a796d96fec21da4f161e8096583bc 344 Gene3D G3DSA:3.40.190.10 134 326 5.8E-113 T 14-10-2018 Tlie_1798 8b6a796d96fec21da4f161e8096583bc 344 Pfam PF13343 Bacterial extracellular solute-binding protein 87 311 9.1E-27 T 14-10-2018 Tlie_1798 8b6a796d96fec21da4f161e8096583bc 344 SUPERFAMILY SSF53850 39 331 2.37E-73 T 14-10-2018 Tlie_1798 8b6a796d96fec21da4f161e8096583bc 344 Gene3D G3DSA:3.40.190.10 39 313 5.8E-113 T 14-10-2018 Tlie_1798 8b6a796d96fec21da4f161e8096583bc 344 PIRSF PIRSF002825 14 344 1.9E-102 T 14-10-2018 IPR026045 Ferric binding protein Tlie_0708 fbe31e1fb2f4cfa0e06905199e5769cf 385 SUPERFAMILY SSF53098 178 330 9.86E-11 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_0708 fbe31e1fb2f4cfa0e06905199e5769cf 385 SUPERFAMILY SSF46689 20 121 5.91E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0859 1d7c15bd3207cdc7d0a916dd5f010762 196 Pfam PF05137 Fimbrial assembly protein (PilN) 103 177 3.6E-11 T 14-10-2018 IPR007813 Fimbrial assembly PilN Tlie_1423 e1e32dc105efd862bfeccac441e4b916 81 Pfam PF13083 KH domain 5 77 2.9E-19 T 14-10-2018 Tlie_1423 e1e32dc105efd862bfeccac441e4b916 81 Gene3D G3DSA:3.30.300.20 8 69 1.5E-7 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Tlie_1423 e1e32dc105efd862bfeccac441e4b916 81 Hamap MF_00088 UPF0109 protein . 4 79 15.195 T 14-10-2018 IPR020627 Uncharacterised protein family UPF0109 Tlie_1423 e1e32dc105efd862bfeccac441e4b916 81 SUPERFAMILY SSF54814 11 65 1.63E-5 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Tlie_1264 72d6c6fc687c096f73223735bb567848 437 SUPERFAMILY SSF46689 20 121 7.7E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_1264 72d6c6fc687c096f73223735bb567848 437 SUPERFAMILY SSF53098 178 330 1.32E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_0904 c7c30daece9b7897e417a81afe6d7422 575 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 383 548 9.1E-65 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Tlie_0904 c7c30daece9b7897e417a81afe6d7422 575 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 380 553 4.4E-55 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Tlie_0108 1dd1c0338d64102e6857a5d2a59933a6 473 Gene3D G3DSA:3.30.750.140 325 433 2.1E-13 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily Tlie_0108 1dd1c0338d64102e6857a5d2a59933a6 473 Pfam PF02120 Flagellar hook-length control protein FliK 349 425 3.8E-15 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Tlie_1295 31565925e6788bd48adbf28fed6dd87b 258 Pfam PF00795 Carbon-nitrogen hydrolase 1 241 1.3E-34 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Tlie_1295 31565925e6788bd48adbf28fed6dd87b 258 SUPERFAMILY SSF56317 1 244 1.44E-60 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tlie_1295 31565925e6788bd48adbf28fed6dd87b 258 Gene3D G3DSA:3.60.110.10 1 255 6.2E-71 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tlie_1628 fde4dc34a0493b3bf5ccc6694b783c56 121 Pfam PF07085 DRTGG domain 5 105 5.1E-8 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Tlie_1628 fde4dc34a0493b3bf5ccc6694b783c56 121 SUPERFAMILY SSF75138 3 108 5.62E-20 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Tlie_0839 d89f9bcaea0ea0c7c2d91f3efc6289e8 173 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 2 163 3.0E-39 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 Tlie_0839 d89f9bcaea0ea0c7c2d91f3efc6289e8 173 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 1 162 9.7E-33 T 14-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 Tlie_0138 566c745c7ee644da3d54b696d81f19ae 378 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 11 370 6.2E-87 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Tlie_0138 566c745c7ee644da3d54b696d81f19ae 378 SMART SM01329 10 372 2.5E-132 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Tlie_0138 566c745c7ee644da3d54b696d81f19ae 378 Gene3D G3DSA:3.40.718.10 2 378 5.1E-116 T 14-10-2018 Tlie_0138 566c745c7ee644da3d54b696d81f19ae 378 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 266 285 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Tlie_0138 566c745c7ee644da3d54b696d81f19ae 378 SUPERFAMILY SSF53659 7 375 1.71E-101 T 14-10-2018 Tlie_1622 88cfa6282142d79e6410495ab987cb2e 214 Pfam PF12804 MobA-like NTP transferase domain 11 162 4.3E-31 T 14-10-2018 IPR025877 MobA-like NTP transferase Tlie_1622 88cfa6282142d79e6410495ab987cb2e 214 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 6 205 22.48 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Tlie_1622 88cfa6282142d79e6410495ab987cb2e 214 SUPERFAMILY SSF53448 11 202 3.6E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_1622 88cfa6282142d79e6410495ab987cb2e 214 Gene3D G3DSA:3.90.550.10 10 212 4.9E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tlie_0236 58ff2898dca1f216349244f4b631414b 260 TIGRFAM TIGR02582 cas7_TM1809: CRISPR type III-A/MTUBE-associated RAMP protein Csm3 15 220 1.1E-76 T 14-10-2018 IPR013412 CRISPR-associated RAMP Csm3 Tlie_0236 58ff2898dca1f216349244f4b631414b 260 Pfam PF03787 RAMP superfamily 23 219 2.3E-20 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein Tlie_0704 9b912be5fd6b0b5b17683f981b65a84a 93 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.1E-25 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0704 9b912be5fd6b0b5b17683f981b65a84a 93 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 86 7.0E-12 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0704 9b912be5fd6b0b5b17683f981b65a84a 93 Gene3D G3DSA:1.20.58.110 1 92 4.2E-30 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0704 9b912be5fd6b0b5b17683f981b65a84a 93 Pfam PF01649 Ribosomal protein S20 2 84 2.1E-28 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0704 9b912be5fd6b0b5b17683f981b65a84a 93 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.959 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0704 9b912be5fd6b0b5b17683f981b65a84a 93 SUPERFAMILY SSF46992 3 86 5.62E-29 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tlie_0937 a9aa4fc5234fcfdca5bc2692a9c0213b 354 SUPERFAMILY SSF46689 1 84 6.72E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_0937 a9aa4fc5234fcfdca5bc2692a9c0213b 354 SUPERFAMILY SSF53098 141 293 8.04E-11 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_1778 ec4f01081e513d0b0c3531c93851e8da 149 Pfam PF00582 Universal stress protein family 1 146 4.9E-27 T 14-10-2018 IPR006016 UspA Tlie_1778 ec4f01081e513d0b0c3531c93851e8da 149 SUPERFAMILY SSF52402 1 148 4.94E-32 T 14-10-2018 Tlie_1778 ec4f01081e513d0b0c3531c93851e8da 149 PRINTS PR01438 Universal stress protein signature 1 14 1.2E-13 T 14-10-2018 IPR006015 Universal stress protein A Tlie_1778 ec4f01081e513d0b0c3531c93851e8da 149 PRINTS PR01438 Universal stress protein signature 124 146 1.2E-13 T 14-10-2018 IPR006015 Universal stress protein A Tlie_1778 ec4f01081e513d0b0c3531c93851e8da 149 PRINTS PR01438 Universal stress protein signature 106 118 1.2E-13 T 14-10-2018 IPR006015 Universal stress protein A Tlie_1778 ec4f01081e513d0b0c3531c93851e8da 149 Gene3D G3DSA:3.40.50.620 1 146 3.8E-34 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tlie_0471 1bb2068a83d5c7fafcdd85e9027072e1 257 SUPERFAMILY SSF53335 17 256 3.58E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tlie_0471 1bb2068a83d5c7fafcdd85e9027072e1 257 Pfam PF13847 Methyltransferase domain 45 166 1.3E-17 T 14-10-2018 IPR025714 Methyltransferase domain Tlie_0471 1bb2068a83d5c7fafcdd85e9027072e1 257 Gene3D G3DSA:3.40.50.150 2 256 1.5E-78 T 14-10-2018 Tlie_1419 2319e18d046d7f76d6e1f90a3094437e 308 Pfam PF03547 Membrane transport protein 160 303 4.7E-20 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Tlie_1419 2319e18d046d7f76d6e1f90a3094437e 308 Pfam PF03547 Membrane transport protein 6 132 8.4E-8 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Tlie_0503 2d0d6c1422d09bee9543d4a113024a8c 183 Pfam PF00881 Nitroreductase family 8 64 3.9E-15 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tlie_0503 2d0d6c1422d09bee9543d4a113024a8c 183 Pfam PF00881 Nitroreductase family 71 157 3.6E-13 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tlie_0503 2d0d6c1422d09bee9543d4a113024a8c 183 SUPERFAMILY SSF55469 1 178 1.18E-48 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tlie_0503 2d0d6c1422d09bee9543d4a113024a8c 183 Gene3D G3DSA:3.40.109.10 2 182 1.4E-48 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tlie_1745 4ac5e3c7f151396cc19b87de0f10fac9 369 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 319 1.6E-21 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tlie_1757 459dc62e96fa78f29193bc8ef2850f82 530 Pfam PF01833 IPT/TIG domain 201 272 1.8E-5 T 14-10-2018 IPR002909 IPT domain Tlie_1757 459dc62e96fa78f29193bc8ef2850f82 530 SUPERFAMILY SSF81296 200 277 5.25E-6 T 14-10-2018 IPR014756 Immunoglobulin E-set Tlie_1757 459dc62e96fa78f29193bc8ef2850f82 530 Gene3D G3DSA:2.60.40.10 182 280 1.2E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold Tlie_0458 2f322cb89603c2afb98ea9f98d54fd30 102 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 38 79 1.1E-8 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Tlie_0627 873cb7cc6c0a7a26a0b386fbc7c3e9ea 382 Pfam PF01098 Cell cycle protein 24 374 4.8E-92 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tlie_0627 873cb7cc6c0a7a26a0b386fbc7c3e9ea 382 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 19 371 1.8E-107 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tlie_1804 eb2f1133eef565a9c55bdf5a54c10c16 200 Gene3D G3DSA:3.40.109.10 2 196 1.6E-52 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tlie_1804 eb2f1133eef565a9c55bdf5a54c10c16 200 SUPERFAMILY SSF55469 9 195 6.02E-45 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tlie_1804 eb2f1133eef565a9c55bdf5a54c10c16 200 Pfam PF00881 Nitroreductase family 75 159 1.5E-12 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tlie_1804 eb2f1133eef565a9c55bdf5a54c10c16 200 Pfam PF00881 Nitroreductase family 15 67 4.5E-12 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tlie_0481 a205908f8af3f7048233f13490db116d 227 Pfam PF01810 LysE type translocator 27 210 6.0E-15 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Tlie_1779 cbe943f09c043b836b7cc6a537fc0675 258 Gene3D G3DSA:3.20.20.370 28 258 2.0E-35 T 14-10-2018 Tlie_1779 cbe943f09c043b836b7cc6a537fc0675 258 SUPERFAMILY SSF88713 41 257 2.2E-35 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Tlie_1779 cbe943f09c043b836b7cc6a537fc0675 258 Pfam PF01522 Polysaccharide deacetylase 60 189 2.5E-18 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Tlie_1206 4a8612af7634aff48df00d101f78ef50 115 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 112 1.6E-28 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Tlie_0438 3f840b473283a567e4f2235d547598e8 103 Gene3D G3DSA:3.30.70.120 1 100 3.6E-5 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tlie_0220 654b33cc32d38b29f4a5a0f3120f9940 185 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 39 163 1.7E-29 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Tlie_0405 aca39aaa219ffa3c68c6f2b7641ac72d 136 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 17 98 1.9E-11 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 Tlie_0025 f1417a12ac5b429c773e5f42108eafda 161 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 16 148 1.8E-25 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Tlie_1289 7c6bb97f26831dd715f71dd9a74e12e8 43 Pfam PF04723 Glycine reductase complex selenoprotein A 4 43 1.2E-14 T 14-10-2018 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 Tlie_1161 c08b9a1821fb75b954b587d8db7b5f60 199 Pfam PF13023 HD domain 16 166 5.2E-41 T 14-10-2018 IPR006674 HD domain Tlie_1161 c08b9a1821fb75b954b587d8db7b5f60 199 SUPERFAMILY SSF109604 7 176 3.45E-35 T 14-10-2018 Tlie_1161 c08b9a1821fb75b954b587d8db7b5f60 199 Gene3D G3DSA:1.10.3210.10 1 195 9.4E-50 T 14-10-2018 Tlie_1676 7eb7fde4cb3a1146952db34b19c29830 495 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 21 439 4.0E-145 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane Tlie_1513 22879304c5d194dbf61c0dec44b21c7c 139 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 131 2.1E-13 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 Tlie_1513 22879304c5d194dbf61c0dec44b21c7c 139 Gene3D G3DSA:3.10.129.10 4 139 8.2E-35 T 14-10-2018 Tlie_1513 22879304c5d194dbf61c0dec44b21c7c 139 Pfam PF03061 Thioesterase superfamily 53 126 1.0E-13 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Tlie_1513 22879304c5d194dbf61c0dec44b21c7c 139 SUPERFAMILY SSF54637 3 135 2.77E-32 T 14-10-2018 IPR029069 HotDog domain superfamily Tlie_0564 f192ca9720d7f1c9b806ab45ec381270 386 Pfam PF06258 Mitochondrial fission ELM1 18 384 1.1E-47 T 14-10-2018 IPR009367 Mitochondrial fission protein ELM1-like Tlie_0593 8f898a60b19c569727664d901ff2022a 219 Gene3D G3DSA:2.60.450.10 112 212 4.8E-8 T 14-10-2018 Tlie_0593 8f898a60b19c569727664d901ff2022a 219 Pfam PF03968 OstA-like protein 30 198 2.0E-5 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Tlie_0693 6cd224d0f1736fe2a710d744507529f5 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 259 7.3E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tlie_1541 7ef6e75247f5dcad932652955073fd31 165 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 35 152 6.4E-26 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Tlie_1700 cb06415d3b73eb344c19aed781e0a663 207 Pfam PF06790 Uncharacterised protein family (UPF0259) 51 154 8.8E-8 T 14-10-2018 IPR009627 Uncharacterised protein family UPF0259 Tlie_0573 b5f4e69e0d6b97b0310337ab4beebd90 587 SUPERFAMILY SSF56935 125 425 1.37E-6 T 14-10-2018 Tlie_0573 b5f4e69e0d6b97b0310337ab4beebd90 587 Pfam PF00395 S-layer homology domain 25 68 6.6E-10 T 14-10-2018 IPR001119 S-layer homology domain Tlie_1123 791b50844cd51a1f09264264cdf88a71 67 SMART SM01409 6 59 6.0E-8 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Tlie_1123 791b50844cd51a1f09264264cdf88a71 67 Pfam PF01192 RNA polymerase Rpb6 10 58 3.2E-9 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Tlie_1123 791b50844cd51a1f09264264cdf88a71 67 SUPERFAMILY SSF63562 9 60 8.76E-10 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Tlie_1123 791b50844cd51a1f09264264cdf88a71 67 Gene3D G3DSA:3.90.940.10 6 67 7.6E-9 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Tlie_1578 097339108713855eda98b4ab3c69cc20 191 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 45 181 1.2E-16 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Tlie_0480 1aa4dadba01f9f3460d159534d216401 479 Pfam PF00361 Proton-conducting membrane transporter 55 312 8.0E-42 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tlie_0480 1aa4dadba01f9f3460d159534d216401 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 213 225 6.1E-11 T 14-10-2018 Tlie_0480 1aa4dadba01f9f3460d159534d216401 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 5 30 6.1E-11 T 14-10-2018 Tlie_0480 1aa4dadba01f9f3460d159534d216401 479 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 128 149 6.1E-11 T 14-10-2018 Tlie_0007 83fb6a5f1d9745a42b3fa7171388f444 385 SUPERFAMILY SSF53098 178 330 9.86E-11 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_0007 83fb6a5f1d9745a42b3fa7171388f444 385 SUPERFAMILY SSF46689 20 121 5.91E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tlie_1428 d5a27d87addf8a2e76195a5510aa8f30 220 Pfam PF02589 LUD domain 22 214 2.8E-42 T 14-10-2018 IPR003741 LUD domain Tlie_1428 d5a27d87addf8a2e76195a5510aa8f30 220 PIRSF PIRSF020269 8 220 2.1E-66 T 14-10-2018 IPR009501 Uncharacterised conserved protein UCP020269 Tlie_0907 fb5f2beceaefb17fd521de743937b358 638 Gene3D G3DSA:3.30.70.2750 139 220 5.0E-13 T 14-10-2018 Tlie_0907 fb5f2beceaefb17fd521de743937b358 638 Pfam PF01496 V-type ATPase 116kDa subunit family 542 628 8.3E-9 T 14-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0907 fb5f2beceaefb17fd521de743937b358 638 Gene3D G3DSA:3.30.70.2170 5 306 5.0E-13 T 14-10-2018 Tlie_0907 fb5f2beceaefb17fd521de743937b358 638 Gene3D G3DSA:1.20.1460.20 45 288 5.0E-13 T 14-10-2018 Tlie_1274 d5a5791d1e38c89d90d61d4330ca936a 195 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 7 183 30.14 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 Tlie_1274 d5a5791d1e38c89d90d61d4330ca936a 195 Pfam PF02677 Uncharacterized BCR, COG1636 7 180 5.6E-54 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 Tlie_1765 191314f472d53f1a02e44c2d2b4ebf8b 366 TIGRFAM TIGR04332 gamma_Glu_sys: poly-gamma-glutamate system protein 30 325 4.6E-107 T 14-10-2018 IPR027602 Poly-gamma-glutamate system protein Tlie_1713 37a803f3cbe36ba1486baa8d4578b4e9 305 Pfam PF09972 Predicted membrane protein (DUF2207) 14 215 2.8E-9 T 14-10-2018 IPR018702 Protein of unknown function DUF2207, membrane Tlie_1137 d48373db7beaa513ab8313ecbabfc952 83 Pfam PF06257 Biofilm formation stimulator VEG 4 72 1.4E-22 T 14-10-2018 IPR009366 Protein Veg GO:0006355 Tlie_1137 d48373db7beaa513ab8313ecbabfc952 83 Gene3D G3DSA:2.30.30.100 2 75 1.0E-14 T 14-10-2018 Tlie_1303 8340568ac4d2ff7584e9d473417423b6 163 Pfam PF05103 DivIVA protein 6 135 3.2E-34 T 14-10-2018 IPR007793 DivIVA family Tlie_1303 8340568ac4d2ff7584e9d473417423b6 163 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 5 37 1.0E-10 T 14-10-2018 IPR019933 DivIVA domain Tlie_0261 4b9b75dcb3d9f655258c9e78c0ae9403 483 Pfam PF09484 CRISPR-associated protein TM1802 (cas_TM1802) 4 479 2.1E-48 T 14-10-2018 IPR013389 CRISPR-associated protein Cas8b Tlie_1481 8d4c940902dcd5e3b23dc23aced979b7 184 Pfam PF10050 Predicted metal-binding protein (DUF2284) 26 182 2.7E-44 T 14-10-2018 IPR019271 Protein of unknown function DUF2284, metal-binding Tlie_1481 8d4c940902dcd5e3b23dc23aced979b7 184 PIRSF PIRSF018748 8 184 9.3E-41 T 14-10-2018 IPR019271 Protein of unknown function DUF2284, metal-binding Tlie_1523 2c833b0477aa0113b4f12563f267a29e 235 Pfam PF04366 Las17-binding protein actin regulator 107 222 2.0E-27 T 14-10-2018 IPR007461 Ysc84 actin-binding domain Tlie_0571 a40f7b8d487152b1c96b975743184aca 409 Pfam PF04932 O-Antigen ligase 188 333 2.5E-12 T 14-10-2018 IPR007016 O-antigen ligase-related Tlie_1121 d6762e83b51cb0597a6f60a98c68de6f 606 Gene3D G3DSA:1.10.8.630 5 112 8.7E-17 T 14-10-2018 Tlie_1121 d6762e83b51cb0597a6f60a98c68de6f 606 Gene3D G3DSA:3.40.50.300 136 276 6.5E-19 T 14-10-2018 Tlie_1121 d6762e83b51cb0597a6f60a98c68de6f 606 SUPERFAMILY SSF52540 128 225 2.17E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tlie_1121 d6762e83b51cb0597a6f60a98c68de6f 606 SUPERFAMILY SSF161187 343 385 5.1E-5 T 14-10-2018 Tlie_0407 54a6c1d5a8fe9b467dfc375bcf0c3081 374 PIRSF PIRSF015658 1 373 1.9E-169 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Tlie_0407 54a6c1d5a8fe9b467dfc375bcf0c3081 374 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 23 366 4.9E-152 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Tlie_0407 54a6c1d5a8fe9b467dfc375bcf0c3081 374 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 24 371 5.1E-159 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Tlie_1504 01f08ae817d0888470ca2b03dacfb498 195 Gene3D G3DSA:1.10.1040.10 26 181 1.2E-56 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Tlie_1504 01f08ae817d0888470ca2b03dacfb498 195 SUPERFAMILY SSF48179 18 191 6.8E-47 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tlie_1504 01f08ae817d0888470ca2b03dacfb498 195 Pfam PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain 16 162 2.0E-46 T 14-10-2018 IPR003421 Opine dehydrogenase GO:0016491|GO:0050662|GO:0055114 Tlie_0474 e4eae001b1c5ebe14d8c5a1555fa79fb 85 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 27 79 1.1E-14 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Tlie_1322 1a186ce34d76d612983379223ac7c05f 316 Pfam PF09991 Predicted membrane protein (DUF2232) 15 306 5.2E-60 T 14-10-2018 IPR018710 Protein of unknown function DUF2232 Tlie_1640 7501fe0faa9c1d866369b41983f5345a 262 Pfam PF10670 Domain of unknown function (DUF4198) 24 231 8.9E-57 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 Tlie_1268 2efca1cb6248c57adc2432bcafcc1e1d 257 Pfam PF14335 Domain of unknown function (DUF4391) 10 244 1.0E-72 T 14-10-2018 IPR025503 Protein of unknown function DUF4391 Tlie_0895 4a1e5b0f43de4f773bfa6ac74844b044 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 280 1.7E-30 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tlie_0914 f3b1c88fdacd66432e4d84b149f09dae 214 Pfam PF01813 ATP synthase subunit D 13 202 3.5E-29 T 14-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Tlie_0068 553b5ddd5c8a029adaa986390cf636d5 156 Pfam PF03963 Flagellar hook capping protein - N-terminal region 25 94 6.0E-22 T 14-10-2018 IPR005648 Flagellar hook capping protein Tlie_1210 b411450f33d6ebee7a0334b50620e388 123 Pfam PF03334 Na+/H+ antiporter subunit 8 97 1.4E-24 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Tlie_1210 b411450f33d6ebee7a0334b50620e388 123 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 8 110 9.2E-30 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Tlie_0156 d88d8ebd7541dad361ba9ec62a8ca9b6 424 Pfam PF03553 Na+/H+ antiporter family 319 420 1.7E-23 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Tlie_0555 18240a5244b2104e1d80dee6270ba4aa 359 SUPERFAMILY SSF53756 68 356 1.65E-6 T 14-10-2018 Tlie_0237 bb83ae0ca10545863d6340c62f521ea1 308 TIGRFAM TIGR01903 cas5_csm4: CRISPR type III-A/MTUBE-associated RAMP protein Csm4 54 291 3.5E-31 T 14-10-2018 IPR005510 CRISPR type III-associated RAMP protein Csm4 Tlie_1657 6a875ce8482d7eba0f1f8ad817019257 314 SUPERFAMILY SSF54506 6 256 1.65E-7 T 14-10-2018 Tlie_0412 b45cd8d76add262856d4faf7e498230b 149 SUPERFAMILY SSF53098 1 143 1.05E-7 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tlie_0615 3226113337da768d062c854d31f90ad0 130 Pfam PF06305 Lipopolysaccharide assembly protein A domain 21 88 7.7E-16 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 Tlie_1461 4d4b6802e89da518ed23fbb9d92de039 43 Pfam PF04723 Glycine reductase complex selenoprotein A 4 43 6.7E-15 T 14-10-2018 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 Tlie_0005 6bfc64cf25474253f992051e80fae45e 164 Pfam PF05258 Protein of unknown function (DUF721) 16 97 2.5E-13 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 Tlie_1724 6be11041c5a424a96fd6cc11e11f5e38 359 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 329 2.5E-41 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tlie_1675 86e0ced8cae07c7892008de27ab251d3 158 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 7 149 8.3E-21 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 Tlie_1335 c580c1492dfab45a5fce1b7918e68bb4 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 1.2E-46 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tlie_0411 05e78327b1ea2ba38c63e1d1034f6506 298 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 17 290 7.5E-45 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Tlie_1619 0a43e5f092600f0ae60ae785aca91bf8 123 Gene3D G3DSA:3.40.30.10 27 122 2.8E-19 T 14-10-2018 Tlie_1619 0a43e5f092600f0ae60ae785aca91bf8 123 SUPERFAMILY SSF52833 27 122 9.06E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tlie_1022 abdfa219846de918d4129564ec96c477 291 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 276 1.0E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tlie_1319 82b0b93fc9486964c3e0660c7d6c33b2 590 Pfam PF04932 O-Antigen ligase 221 378 3.0E-16 T 14-10-2018 IPR007016 O-antigen ligase-related Tlie_1432 07c8b4106c4aa0cbffe63d1239c57119 250 Pfam PF01925 Sulfite exporter TauE/SafE 10 243 8.7E-44 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Tlie_1280 af284221f92a2c97c23dbf86150c131b 209 Pfam PF01618 MotA/TolQ/ExbB proton channel family 66 185 2.8E-32 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Tlie_0080 56d9540b9b60314b55a6f6646b3ad203 531 Pfam PF03961 Flagellar Assembly Protein A 68 521 9.6E-109 T 14-10-2018 IPR005646 Flagellar assembly protein A Tlie_1171 1319fdd03a85490ecdcb58139be38ce0 201 Pfam PF02163 Peptidase family M50 122 157 3.4E-7 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Tlie_1811 b3edd675c49d842748a0e05437aa2b38 212 Pfam PF02397 Bacterial sugar transferase 6 180 5.2E-69 T 14-10-2018 IPR003362 Bacterial sugar transferase Tlie_0063 c319f92b80b49dc3058302d2487e4b62 399 Pfam PF02646 RmuC family 96 376 4.3E-73 T 14-10-2018 IPR003798 DNA recombination RmuC Tlie_0311 599c6e0bfad5e4ccecb54118e444cb0b 176 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 153 1.4E-33 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Tlie_0622 80999ed9b35107e222b5309f2ce97bfb 155 Pfam PF04093 rod shape-determining protein MreD 3 145 4.1E-6 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Tlie_1514 cdf79a149d549eeb13412052d0609d7d 147 Pfam PF10865 Domain of unknown function (DUF2703) 4 119 2.1E-30 T 14-10-2018 IPR021219 Protein of unknown function DUF2703 Tlie_0215 24c3eda22d40b8351735f7f32641d535 66 Pfam PF11148 Protein of unknown function (DUF2922) 2 65 2.9E-18 T 14-10-2018 IPR021321 Protein of unknown function DUF2922 Tlie_1822 b7601e10db75e9054de9c2f8af51905c 483 Pfam PF13440 Polysaccharide biosynthesis protein 41 340 1.6E-27 T 14-10-2018 Tlie_1030 ce1e234933a3946681f652e2f3767aed 75 Pfam PF11146 Protein of unknown function (DUF2905) 6 70 2.0E-19 T 14-10-2018 IPR021320 Protein of unknown function DUF2905 Tlie_1191 6eecd7e5bd427fcb64d5c8195b4b4184 78 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 1 77 9.4E-27 T 14-10-2018 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 Tlie_1709 d182c91c65b09f6736ced3cee839ba02 174 Pfam PF08905 Domain of unknown function (DUF1850) 58 135 1.9E-14 T 14-10-2018 IPR015001 Protein of unknown function DUF1850 Tlie_0731 321bcb9f7082a77f9da0e4a518edd071 441 Pfam PF02386 Cation transport protein 22 416 1.4E-56 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Tlie_1218 99ffcb2670bf34d0289456a4de1a37f6 72 Pfam PF11755 Protein of unknown function (DUF3311) 25 71 2.1E-12 T 14-10-2018 IPR021741 Protein of unknown function DUF3311