A0O31_00001 SM00840 A0O31_00001 A0O31_00008 SM00890 Domain of unknown function A0O31_00011 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A0O31_00011 SM00481 DNA polymerase alpha chain like domain A0O31_00011 SM00483 DNA polymerase X family A0O31_00012 SM00986 Uracil DNA glycosylase superfamily A0O31_00012 SM00987 UreE urease accessory protein, C-terminal domain A0O31_00013 SM00421 helix_turn_helix, Lux Regulon A0O31_00017 SM00893 Electron transfer flavoprotein domain A0O31_00018 SM00893 Electron transfer flavoprotein domain A0O31_00020 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A0O31_00020 SM00091 PAS domain A0O31_00020 SM00387 Histidine kinase-like ATPases A0O31_00020 SM00388 His Kinase A (phosphoacceptor) domain A0O31_00021 SM00448 cheY-homologous receiver domain A0O31_00023 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A0O31_00025 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A0O31_00032 SM00347 helix_turn_helix multiple antibiotic resistance protein A0O31_00034 SM00796 Allophanate hydrolase subunit 1 A0O31_00034 SM00797 Allophanate hydrolase subunit 2 A0O31_00041 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A0O31_00044 SM00346 helix_turn_helix isocitrate lyase regulation A0O31_00052 SM00822 A0O31_00052 A0O31_00070 SM00822 A0O31_00070 A0O31_00074 SM00822 A0O31_00074 A0O31_00080 SM00345 helix_turn_helix gluconate operon transcriptional repressor A0O31_00080 SM00895 A0O31_00080 A0O31_00085 SM00382 ATPases associated with a variety of cellular activities A0O31_00086 SM00382 ATPases associated with a variety of cellular activities A0O31_00093 SM00859 Semialdehyde dehydrogenase, NAD binding domain A0O31_00094 SM00346 helix_turn_helix isocitrate lyase regulation A0O31_00109 SM00822 A0O31_00109 A0O31_00113 SM00382 ATPases associated with a variety of cellular activities A0O31_00114 SM00382 ATPases associated with a variety of cellular activities A0O31_00118 SM00903 Flavin reductase like domain A0O31_00122 SM01130 A0O31_00122 A0O31_00126 SM00382 ATPases associated with a variety of cellular activities A0O31_00136 SM00798 AICARFT/IMPCHase bienzyme A0O31_00136 SM00851 MGS-like domain A0O31_00143 SM00382 ATPases associated with a variety of cellular activities A0O31_00149 SM00028 Tetratricopeptide repeats A0O31_00150 SM00382 ATPases associated with a variety of cellular activities A0O31_00150 SM01086 C-terminal, D2-small domain, of ClpB protein A0O31_00153 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain A0O31_00155 SM00327 von Willebrand factor (vWF) type A domain A0O31_00174 SM00382 ATPases associated with a variety of cellular activities A0O31_00174 SM00464 Found in ATP-dependent protease La (LON) A0O31_00185 SM00878 Biotin carboxylase C-terminal domain A0O31_00185 SM01209 A0O31_00185 A0O31_00187 SM00841 Elongation factor P, C-terminal A0O31_00187 SM01185 A0O31_00187 A0O31_00193 SM00960 Roadblock/LC7 domain A0O31_00200 SM01387 A0O31_00200 A0O31_00203 SM00849 Metallo-beta-lactamase superfamily A0O31_00206 SM00116 Domain in cystathionine beta-synthase and other proteins. A0O31_00207 SM00831 Cation transporter/ATPase, N-terminus A0O31_00213 SM00382 ATPases associated with a variety of cellular activities A0O31_00214 SM00382 ATPases associated with a variety of cellular activities A0O31_00218 SM01207 A0O31_00218 A0O31_00222 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A0O31_00224 SM00316 Ribosomal protein S1-like RNA-binding domain A0O31_00224 SM00955 A0O31_00224 A0O31_00233 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A0O31_00233 SM00475 5'-3' exonuclease A0O31_00233 SM00482 DNA polymerase A domain A0O31_00251 SM00849 Metallo-beta-lactamase superfamily A0O31_00252 SM00327 von Willebrand factor (vWF) type A domain A0O31_00259 SM00316 Ribosomal protein S1-like RNA-binding domain A0O31_00259 SM00322 K homology RNA-binding domain A0O31_00267 SM00421 helix_turn_helix, Lux Regulon A0O31_00273 SM00382 ATPases associated with a variety of cellular activities A0O31_00273 SM00962 SRP54-type protein, GTPase domain A0O31_00273 SM00963 SRP54-type protein, helical bundle domain A0O31_00274 SM00116 Domain in cystathionine beta-synthase and other proteins. A0O31_00274 SM00924 MgtE intracellular N domain A0O31_00280 SM00854 Bacterial capsule synthesis protein PGA_cap A0O31_00289 SM00822 A0O31_00289 A0O31_00293 SM00838 Elongation factor G C-terminus A0O31_00294 SM00387 Histidine kinase-like ATPases A0O31_00294 SM00388 His Kinase A (phosphoacceptor) domain A0O31_00297 SM01130 A0O31_00297 A0O31_00300 SM00116 Domain in cystathionine beta-synthase and other proteins. A0O31_00300 SM01091 Transporter associated domain A0O31_00301 SM00347 helix_turn_helix multiple antibiotic resistance protein A0O31_00320 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain A0O31_00323 SM00849 Metallo-beta-lactamase superfamily A0O31_00324 SM00220 Serine/Threonine protein kinases, catalytic domain A0O31_00337 SM00986 Uracil DNA glycosylase superfamily A0O31_00337 SM00987 UreE urease accessory protein, C-terminal domain A0O31_00340 SM00382 ATPases associated with a variety of cellular activities A0O31_00351 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A0O31_00353 SM00257 Lysin motif A0O31_00354 SM00382 ATPases associated with a variety of cellular activities A0O31_00354 SM00959 Rho termination factor, N-terminal domain A0O31_00359 SM00257 Lysin motif A0O31_00360 SM00518 AP endonuclease family 2 A0O31_00376 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A0O31_00385 SM00849 Metallo-beta-lactamase superfamily A0O31_00387 SM00763 PrkA AAA domain A0O31_00391 SM00450 Rhodanese Homology Domain A0O31_00393 SM00450 Rhodanese Homology Domain A0O31_00393 SM00849 Metallo-beta-lactamase superfamily A0O31_00394 SM00450 Rhodanese Homology Domain A0O31_00401 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A0O31_00401 SM00267 diguanylate cyclase A0O31_00402 SM00052 Putative diguanylate phosphodiesterase A0O31_00402 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A0O31_00402 SM00267 diguanylate cyclase A0O31_00403 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A0O31_00403 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A0O31_00403 SM00091 PAS domain A0O31_00403 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A0O31_00416 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A0O31_00418 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A0O31_00418 SM01043 Bacterial transcriptional activator domain A0O31_00419 SM00100 Cyclic nucleotide-monophosphate binding domain A0O31_00419 SM00419 helix_turn_helix, cAMP Regulatory protein A0O31_00420 SM00899 A0O31_00420 A0O31_00426 SM00729 Elongator protein 3, MiaB family, Radical SAM A0O31_00438 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A0O31_00440 SM01007 Class II Aldolase and Adducin N-terminal domain A0O31_00444 SM00327 von Willebrand factor (vWF) type A domain A0O31_00445 SM00327 von Willebrand factor (vWF) type A domain A0O31_00451 SM00382 ATPases associated with a variety of cellular activities A0O31_00452 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A0O31_00452 SM00245 tail specific protease A0O31_00459 SM00382 ATPases associated with a variety of cellular activities A0O31_00463 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A0O31_00463 SM00292 breast cancer carboxy-terminal domain A0O31_00463 SM00532 Ligase N family A0O31_00465 SM00382 ATPases associated with a variety of cellular activities A0O31_00470 SM00448 cheY-homologous receiver domain A0O31_00472 SM00116 Domain in cystathionine beta-synthase and other proteins. A0O31_00474 SM00935 Outer membrane protein (OmpH-like) A0O31_00479 SM00829 Enoylreductase A0O31_00500 SM01329 A0O31_00500 A0O31_00501 SM00955 A0O31_00501 A0O31_00510 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A0O31_00510 SM00465 GIY-YIG type nucleases (URI domain) A0O31_00512 SM00836 DALR anticodon binding domain A0O31_00512 SM01016 Arginyl tRNA synthetase N terminal dom A0O31_00513 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A0O31_00532 SM01043 Bacterial transcriptional activator domain A0O31_00536 SM00563 Phosphate acyltransferases A0O31_00537 SM00411 bacterial (prokaryotic) histone like domain A0O31_00538 SM00382 ATPases associated with a variety of cellular activities A0O31_00541 SM00271 DnaJ molecular chaperone homology domain A0O31_00543 SM00382 ATPases associated with a variety of cellular activities A0O31_00543 SM01086 C-terminal, D2-small domain, of ClpB protein A0O31_00556 SM00116 Domain in cystathionine beta-synthase and other proteins. A0O31_00564 SM00116 Domain in cystathionine beta-synthase and other proteins. A0O31_00564 SM01240 A0O31_00564 A0O31_00566 SM00448 cheY-homologous receiver domain A0O31_00566 SM00862 Transcriptional regulatory protein, C terminal A0O31_00567 SM00387 Histidine kinase-like ATPases A0O31_00570 SM00937 A0O31_00570 A0O31_00574 SM00564 beta-propeller repeat A0O31_00581 SM00506 Appr-1"-p processing enzyme A0O31_00604 SM00663 RNA polymerase I subunit A N-terminus A0O31_00605 SM01007 Class II Aldolase and Adducin N-terminal domain A0O31_00621 SM00028 Tetratricopeptide repeats A0O31_00629 SM00382 ATPases associated with a variety of cellular activities A0O31_00635 SM00450 Rhodanese Homology Domain A0O31_00644 SM00594 A0O31_00644 A0O31_00646 SM00382 ATPases associated with a variety of cellular activities A0O31_00649 SM00382 ATPases associated with a variety of cellular activities A0O31_00657 SM00387 Histidine kinase-like ATPases A0O31_00657 SM00388 His Kinase A (phosphoacceptor) domain A0O31_00658 SM00448 cheY-homologous receiver domain A0O31_00658 SM00862 Transcriptional regulatory protein, C terminal A0O31_00659 SM00220 Serine/Threonine protein kinases, catalytic domain A0O31_00660 SM00331 Sigma factor PP2C-like phosphatases A0O31_00660 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A0O31_00666 SM00829 Enoylreductase A0O31_00677 SM00704 CDGSH-type zinc finger. Function unknown. A0O31_00678 SM00729 Elongator protein 3, MiaB family, Radical SAM A0O31_00684 SM00116 Domain in cystathionine beta-synthase and other proteins. A0O31_00689 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A0O31_00692 SM00853 MutL C terminal dimerisation domain A0O31_00692 SM01340 A0O31_00692 A0O31_00693 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A0O31_00693 SM00534 ATPase domain of DNA mismatch repair MUTS family A0O31_00698 SM01230 A0O31_00698 A0O31_00702 SM00382 ATPases associated with a variety of cellular activities A0O31_00703 SM00382 ATPases associated with a variety of cellular activities A0O31_00710 SM00382 ATPases associated with a variety of cellular activities A0O31_00711 SM00382 ATPases associated with a variety of cellular activities A0O31_00715 SM00421 helix_turn_helix, Lux Regulon A0O31_00715 SM00448 cheY-homologous receiver domain A0O31_00717 SM00257 Lysin motif A0O31_00725 SM00382 ATPases associated with a variety of cellular activities A0O31_00726 SM00845 GatB domain A0O31_00728 SM00855 Phosphoglycerate mutase family A0O31_00732 SM00998 Adenylosuccinate lyase C-terminus A0O31_00735 SM01211 A0O31_00735 A0O31_00745 SM00316 Ribosomal protein S1-like RNA-binding domain A0O31_00750 SM00267 diguanylate cyclase A0O31_00755 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A0O31_00755 SM01232 A0O31_00755 A0O31_00759 SM00305 Hint (Hedgehog/Intein) domain C-terminal region A0O31_00759 SM00306 Hint (Hedgehog/Intein) domain N-terminal region A0O31_00763 SM00322 K homology RNA-binding domain A0O31_00763 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A0O31_00767 SM00852 Probable molybdopterin binding domain A0O31_00771 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A0O31_00776 SM00732 Likely ribonuclease with RNase H fold. A0O31_00778 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A0O31_00780 SM00838 Elongation factor G C-terminus A0O31_00780 SM00889 Elongation factor G, domain IV A0O31_00781 SM00382 ATPases associated with a variety of cellular activities A0O31_00784 SM00448 cheY-homologous receiver domain A0O31_00784 SM00862 Transcriptional regulatory protein, C terminal A0O31_00785 SM00387 Histidine kinase-like ATPases A0O31_00785 SM00388 His Kinase A (phosphoacceptor) domain A0O31_00796 SM00867 YceI-like domain A0O31_00820 SM00967 RNA 2'-O ribose methyltransferase substrate binding A0O31_00831 SM00382 ATPases associated with a variety of cellular activities A0O31_00836 SM00382 ATPases associated with a variety of cellular activities A0O31_00842 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A0O31_00842 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A0O31_00847 SM00382 ATPases associated with a variety of cellular activities A0O31_00848 SM00851 MGS-like domain A0O31_00850 SM00849 Metallo-beta-lactamase superfamily A0O31_00851 SM00382 ATPases associated with a variety of cellular activities A0O31_00858 SM00257 Lysin motif A0O31_00861 SM00478 endonuclease III A0O31_00861 SM00525 A0O31_00861 A0O31_00862 SM00881 CoA binding domain A0O31_00869 SM00859 Semialdehyde dehydrogenase, NAD binding domain A0O31_00884 SM00448 cheY-homologous receiver domain A0O31_00884 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A0O31_00885 SM00960 Roadblock/LC7 domain A0O31_00892 SM00450 Rhodanese Homology Domain A0O31_00894 SM00849 Metallo-beta-lactamase superfamily A0O31_00900 SM00382 ATPases associated with a variety of cellular activities A0O31_00920 SM00861 Transketolase, pyrimidine binding domain A0O31_00925 SM00530 Helix-turn-helix XRE-family like proteins A0O31_00927 SM00966 SpoVT / AbrB like domain A0O31_00934 SM00729 Elongator protein 3, MiaB family, Radical SAM A0O31_00943 SM00487 DEAD-like helicases superfamily A0O31_00943 SM00490 helicase superfamily c-terminal domain A0O31_00946 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A0O31_00946 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A0O31_00973 SM00046 Diacylglycerol kinase catalytic domain (presumed) A0O31_00979 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain A0O31_00981 SM00829 Enoylreductase A0O31_00985 SM00937 A0O31_00985 A0O31_00996 SM00382 ATPases associated with a variety of cellular activities A0O31_01006 SM00305 Hint (Hedgehog/Intein) domain C-terminal region A0O31_01006 SM00306 Hint (Hedgehog/Intein) domain N-terminal region A0O31_01011 SM00729 Elongator protein 3, MiaB family, Radical SAM A0O31_01018 SM00028 Tetratricopeptide repeats A0O31_01021 SM00448 cheY-homologous receiver domain A0O31_01021 SM00862 Transcriptional regulatory protein, C terminal A0O31_01027 SM01400 A0O31_01027 A0O31_01031 SM00267 diguanylate cyclase A0O31_01040 SM00642 Alpha-amylase domain A0O31_01042 SM00463 Small MutS-related domain A0O31_01042 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A0O31_01042 SM00534 ATPase domain of DNA mismatch repair MUTS family A0O31_01045 SM00226 Low molecular weight phosphatase family A0O31_01051 SM00903 Flavin reductase like domain A0O31_01059 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A0O31_01064 SM00518 AP endonuclease family 2 A0O31_01069 SM00316 Ribosomal protein S1-like RNA-binding domain A0O31_01071 SM00116 Domain in cystathionine beta-synthase and other proteins. A0O31_01087 SM00382 ATPases associated with a variety of cellular activities A0O31_01091 SM00938 Nitrogen regulatory protein P-II A0O31_01102 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A0O31_01113 SM00881 CoA binding domain A0O31_01113 SM00967 RNA 2'-O ribose methyltransferase substrate binding A0O31_01114 SM00883 Chaperonin 10 Kd subunit A0O31_01116 SM00481 DNA polymerase alpha chain like domain A0O31_01119 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A0O31_01127 SM00357 Cold shock protein domain A0O31_01133 SM00382 ATPases associated with a variety of cellular activities A0O31_01137 SM00861 Transketolase, pyrimidine binding domain A0O31_01138 SM00849 Metallo-beta-lactamase superfamily A0O31_01140 SM00729 Elongator protein 3, MiaB family, Radical SAM A0O31_01143 SM01192 A0O31_01143 A0O31_01143 SM01193 A0O31_01143 A0O31_01144 SM00480 DNA polymerase III beta subunit A0O31_01145 SM00382 ATPases associated with a variety of cellular activities A0O31_01145 SM00760 Bacterial dnaA protein helix-turn-helix domain A0O31_01146 SM01228 A0O31_01146 A0O31_01149 SM00470 ParB-like nuclease domain A0O31_01151 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A0O31_01159 SM00873 B3/4 domain A0O31_01159 SM00874 tRNA synthetase B5 domain A0O31_01159 SM00896 Ferredoxin-fold anticodon binding domain A0O31_01164 SM01005 Alanine racemase, C-terminal domain A0O31_01172 SM00244 prohibitin homologues A0O31_01174 SM00382 ATPases associated with a variety of cellular activities A0O31_01182 SM00382 ATPases associated with a variety of cellular activities A0O31_01201 SM00852 Probable molybdopterin binding domain A0O31_01212 SM00981 A0O31_01212 A0O31_01214 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A0O31_01225 SM00905 Dihydroneopterin aldolase A0O31_01227 SM00562 A0O31_01227 A0O31_01228 SM00331 Sigma factor PP2C-like phosphatases A0O31_01228 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A0O31_01230 SM00563 Phosphate acyltransferases A0O31_01242 SM01329 A0O31_01242 A0O31_01244 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A0O31_01250 SM00646 A0O31_01250 A0O31_01251 SM00220 Serine/Threonine protein kinases, catalytic domain A0O31_01262 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A0O31_01262 SM00387 Histidine kinase-like ATPases A0O31_01262 SM00388 His Kinase A (phosphoacceptor) domain A0O31_01263 SM00448 cheY-homologous receiver domain A0O31_01263 SM00862 Transcriptional regulatory protein, C terminal A0O31_01276 SM00382 ATPases associated with a variety of cellular activities A0O31_01282 SM00704 CDGSH-type zinc finger. Function unknown. A0O31_01288 SM00448 cheY-homologous receiver domain A0O31_01288 SM00862 Transcriptional regulatory protein, C terminal A0O31_01289 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A0O31_01289 SM00387 Histidine kinase-like ATPases A0O31_01289 SM00388 His Kinase A (phosphoacceptor) domain A0O31_01293 SM00382 ATPases associated with a variety of cellular activities A0O31_01296 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A0O31_01298 SM00861 Transketolase, pyrimidine binding domain A0O31_01304 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A0O31_01313 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A0O31_01332 SM00357 Cold shock protein domain A0O31_01333 SM00271 DnaJ molecular chaperone homology domain A0O31_01340 SM01058 CarD-like/TRCF domain A0O31_01360 SM00478 endonuclease III A0O31_01363 SM00849 Metallo-beta-lactamase superfamily A0O31_01363 SM01027 Beta-Casp domain A0O31_01372 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A0O31_01372 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A0O31_01373 SM00649 Ribosomal protein L11/L12 A0O31_01380 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A0O31_01381 SM00363 S4 RNA-binding domain A0O31_01384 SM00382 ATPases associated with a variety of cellular activities A0O31_01395 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A0O31_01395 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A0O31_01395 SM00493 A0O31_01395 A0O31_01397 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A0O31_01397 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A0O31_01404 SM00830 Chorismate mutase type II A0O31_01421 SM00487 DEAD-like helicases superfamily A0O31_01421 SM00490 helicase superfamily c-terminal domain A0O31_01421 SM00847 Helicase associated domain (HA2) Add an annotation A0O31_01422 SM00387 Histidine kinase-like ATPases A0O31_01422 SM00433 TopoisomeraseII A0O31_01429 SM00345 helix_turn_helix gluconate operon transcriptional repressor A0O31_01429 SM00895 A0O31_01429 A0O31_01436 SM00788 Adenylosuccinate synthetase A0O31_01440 SM00363 S4 RNA-binding domain A0O31_01443 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A0O31_01443 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A0O31_01445 SM01120 A0O31_01445 A0O31_01445 SM01121 A0O31_01445 A0O31_01453 SM00838 Elongation factor G C-terminus A0O31_01453 SM00889 Elongation factor G, domain IV A0O31_01455 SM01403 A0O31_01455 A0O31_01459 SM01382 A0O31_01459 A0O31_01459 SM01383 A0O31_01459 A0O31_01462 SM00322 K homology RNA-binding domain A0O31_01466 SM01374 A0O31_01466 A0O31_01467 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A0O31_01483 SM00363 S4 RNA-binding domain A0O31_01483 SM01390 A0O31_01483 A0O31_01484 SM00662 RNA polymerases D A0O31_01488 SM00642 Alpha-amylase domain A0O31_01489 SM00507 HNH nucleases A0O31_01490 SM00028 Tetratricopeptide repeats A0O31_01492 SM00881 CoA binding domain A0O31_01495 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A0O31_01496 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A0O31_01501 SM00028 Tetratricopeptide repeats A0O31_01503 SM00100 Cyclic nucleotide-monophosphate binding domain A0O31_01503 SM00419 helix_turn_helix, cAMP Regulatory protein A0O31_01507 SM00642 Alpha-amylase domain A0O31_01508 SM00072 Guanylate kinase homologues. A0O31_01509 SM01409 A0O31_01509 A0O31_01513 SM00267 diguanylate cyclase A0O31_01517 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A0O31_01525 SM00387 Histidine kinase-like ATPases A0O31_01525 SM00388 His Kinase A (phosphoacceptor) domain A0O31_01526 SM00448 cheY-homologous receiver domain A0O31_01526 SM00862 Transcriptional regulatory protein, C terminal A0O31_01529 SM00419 helix_turn_helix, cAMP Regulatory protein A0O31_01531 SM00434 DNA Topoisomerase IV A0O31_01532 SM00729 Elongator protein 3, MiaB family, Radical SAM A0O31_01542 SM00244 prohibitin homologues A0O31_01549 SM00960 Roadblock/LC7 domain A0O31_01550 SM00960 Roadblock/LC7 domain A0O31_01552 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A0O31_01552 SM00493 A0O31_01552 A0O31_01554 SM01004 Delta-aminolevulinic acid dehydratase A0O31_01562 SM01400 A0O31_01562 A0O31_01569 SM00420 helix_turn_helix, Deoxyribose operon repressor A0O31_01569 SM01134 A0O31_01569 A0O31_01578 SM00382 ATPases associated with a variety of cellular activities A0O31_01579 SM00028 Tetratricopeptide repeats A0O31_01581 SM00382 ATPases associated with a variety of cellular activities A0O31_01587 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A0O31_01590 SM00822 A0O31_01590 A0O31_01591 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A0O31_01603 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A0O31_01603 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A0O31_01604 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A0O31_01610 SM00650 Ribosomal RNA adenine dimethylases A0O31_01658 SM00028 Tetratricopeptide repeats A0O31_01669 SM01001 AIR carboxylase A0O31_01675 SM00919 Malic enzyme, NAD binding domain A0O31_01675 SM01274 A0O31_01675 A0O31_01682 SM00450 Rhodanese Homology Domain A0O31_01685 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A0O31_01687 SM00421 helix_turn_helix, Lux Regulon A0O31_01687 SM00448 cheY-homologous receiver domain A0O31_01688 SM00387 Histidine kinase-like ATPases A0O31_01689 SM00904 Riboflavin kinase A0O31_01695 SM00650 Ribosomal RNA adenine dimethylases A0O31_01699 SM00400 zinc finger A0O31_01699 SM00493 A0O31_01699 A0O31_01704 SM00487 DEAD-like helicases superfamily A0O31_01704 SM00490 helicase superfamily c-terminal domain A0O31_01716 SM00267 diguanylate cyclase A0O31_01720 SM00867 YceI-like domain A0O31_01722 SM00729 Elongator protein 3, MiaB family, Radical SAM A0O31_01725 SM00354 helix_turn _helix lactose operon repressor A0O31_01726 SM01207 A0O31_01726 A0O31_01728 SM00849 Metallo-beta-lactamase superfamily A0O31_01730 SM01209 A0O31_01730 A0O31_01730 SM01210 A0O31_01730 A0O31_01731 SM00479 A0O31_01731 A0O31_01732 SM00448 cheY-homologous receiver domain A0O31_01733 SM00387 Histidine kinase-like ATPases A0O31_01733 SM00388 His Kinase A (phosphoacceptor) domain A0O31_01735 SM00100 Cyclic nucleotide-monophosphate binding domain A0O31_01735 SM00116 Domain in cystathionine beta-synthase and other proteins. A0O31_01751 SM00382 ATPases associated with a variety of cellular activities A0O31_01757 SM00822 A0O31_01757 A0O31_01759 SM01329 A0O31_01759 A0O31_01767 SM00382 ATPases associated with a variety of cellular activities A0O31_01767 SM00962 SRP54-type protein, GTPase domain A0O31_01767 SM00963 SRP54-type protein, helical bundle domain A0O31_01770 SM00382 ATPases associated with a variety of cellular activities A0O31_01776 SM01234 A0O31_01776 A0O31_01779 SM00382 ATPases associated with a variety of cellular activities A0O31_01784 SM00382 ATPases associated with a variety of cellular activities A0O31_01785 SM00382 ATPases associated with a variety of cellular activities A0O31_01793 SM00382 ATPases associated with a variety of cellular activities A0O31_01802 SM00155 Phospholipase D. Active site motifs. A0O31_01810 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain A0O31_01816 SM00382 ATPases associated with a variety of cellular activities A0O31_01817 SM01022 A0O31_01817 A0O31_01818 SM00478 endonuclease III A0O31_01818 SM00525 A0O31_01818 A0O31_01820 SM00852 Probable molybdopterin binding domain A0O31_01821 SM00487 DEAD-like helicases superfamily A0O31_01821 SM00490 helicase superfamily c-terminal domain A0O31_01843 SM00530 Helix-turn-helix XRE-family like proteins A0O31_01845 SM00487 DEAD-like helicases superfamily A0O31_01851 SM00861 Transketolase, pyrimidine binding domain A0O31_01856 SM00028 Tetratricopeptide repeats A0O31_01856 SM00387 Histidine kinase-like ATPases A0O31_01856 SM00388 His Kinase A (phosphoacceptor) domain A0O31_01857 SM00448 cheY-homologous receiver domain A0O31_01865 SM00382 ATPases associated with a variety of cellular activities A0O31_01874 SM00829 Enoylreductase A0O31_01879 SM00382 ATPases associated with a variety of cellular activities A0O31_01880 SM00382 ATPases associated with a variety of cellular activities A0O31_01881 SM00116 Domain in cystathionine beta-synthase and other proteins. A0O31_01886 SM00642 Alpha-amylase domain A0O31_01902 SM00729 Elongator protein 3, MiaB family, Radical SAM A0O31_01910 SM00346 helix_turn_helix isocitrate lyase regulation A0O31_01911 SM00422 helix_turn_helix, mercury resistance A0O31_01915 SM00100 Cyclic nucleotide-monophosphate binding domain A0O31_01915 SM00419 helix_turn_helix, cAMP Regulatory protein A0O31_01916 SM00382 ATPases associated with a variety of cellular activities A0O31_01924 SM00849 Metallo-beta-lactamase superfamily A0O31_01933 SM00729 Elongator protein 3, MiaB family, Radical SAM A0O31_01937 SM00382 ATPases associated with a variety of cellular activities A0O31_01937 SM00464 Found in ATP-dependent protease La (LON) A0O31_01954 SM00957 SecA DEAD-like domain A0O31_01954 SM00958 SecA preprotein cross-linking domain A0O31_01959 SM00382 ATPases associated with a variety of cellular activities A0O31_01959 SM00843 A0O31_01959 A0O31_01965 SM00116 Domain in cystathionine beta-synthase and other proteins. A0O31_01968 SM00487 DEAD-like helicases superfamily A0O31_01968 SM00490 helicase superfamily c-terminal domain A0O31_01977 SM00670 Large family of predicted nucleotide-binding domains A0O31_01978 SM00382 ATPases associated with a variety of cellular activities A0O31_01979 SM00382 ATPases associated with a variety of cellular activities A0O31_01979 SM01086 C-terminal, D2-small domain, of ClpB protein A0O31_01981 SM00859 Semialdehyde dehydrogenase, NAD binding domain A0O31_01982 SM00363 S4 RNA-binding domain A0O31_01991 SM01207 A0O31_01991 A0O31_02000 SM00917 LeuA allosteric (dimerisation) domain A0O31_02001 SM00917 LeuA allosteric (dimerisation) domain A0O31_02004 SM00382 ATPases associated with a variety of cellular activities A0O31_02006 SM01207 A0O31_02006 A0O31_02010 SM00859 Semialdehyde dehydrogenase, NAD binding domain A0O31_02021 SM00155 Phospholipase D. Active site motifs. A0O31_02022 SM01133 A0O31_02022 A0O31_02027 SM00387 Histidine kinase-like ATPases A0O31_02028 SM00226 Low molecular weight phosphatase family A0O31_02034 SM00729 Elongator protein 3, MiaB family, Radical SAM A0O31_02038 SM00062 Bacterial periplasmic substrate-binding proteins A0O31_02038 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A0O31_02042 SM00382 ATPases associated with a variety of cellular activities A0O31_02056 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A0O31_02062 SM00829 Enoylreductase A0O31_02071 SM00382 ATPases associated with a variety of cellular activities A0O31_02073 SM00822 A0O31_02073 A0O31_02075 SM00529 Helix-turn-helix diphteria tox regulatory element A0O31_02075 SM00899 A0O31_02075 A0O31_02076 SM00267 diguanylate cyclase A0O31_02084 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A0O31_02088 SM00387 Histidine kinase-like ATPases A0O31_02089 SM00421 helix_turn_helix, Lux Regulon A0O31_02089 SM00448 cheY-homologous receiver domain A0O31_02091 SM00864 Tubulin/FtsZ family, GTPase domain A0O31_02091 SM00865 Tubulin/FtsZ family, C-terminal domain A0O31_02119 SM00530 Helix-turn-helix XRE-family like proteins A0O31_02120 SM00530 Helix-turn-helix XRE-family like proteins A0O31_02122 SM00382 ATPases associated with a variety of cellular activities A0O31_02165 SM00479 A0O31_02165 A0O31_02170 SM00382 ATPases associated with a variety of cellular activities A0O31_02182 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A0O31_02188 SM00382 ATPases associated with a variety of cellular activities A0O31_02188 SM00994 ClpX C4-type zinc finger A0O31_02188 SM01086 C-terminal, D2-small domain, of ClpB protein A0O31_02190 SM01018 B12 binding domain A0O31_02191 SM00450 Rhodanese Homology Domain A0O31_02196 SM00968 SMC proteins Flexible Hinge Domain A0O31_02197 SM00909 Sporulation and spore germination A0O31_02202 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A0O31_02208 SM00116 Domain in cystathionine beta-synthase and other proteins. A0O31_02228 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A0O31_02242 SM00487 DEAD-like helicases superfamily A0O31_02242 SM00490 helicase superfamily c-terminal domain A0O31_02242 SM00982 A0O31_02242 A0O31_02242 SM01058 CarD-like/TRCF domain A0O31_02276 SM00903 Flavin reductase like domain A0O31_02277 SM00867 YceI-like domain A0O31_02279 SM00470 ParB-like nuclease domain A0O31_02312 SM00849 Metallo-beta-lactamase superfamily A0O31_02318 SM00382 ATPases associated with a variety of cellular activities A0O31_02341 SM00822 A0O31_02341 A0O31_02346 SM00633 Glycosyl hydrolase family 10 A0O31_02353 SM00382 ATPases associated with a variety of cellular activities A0O31_02364 SM00382 ATPases associated with a variety of cellular activities A0O31_02380 SM00487 DEAD-like helicases superfamily A0O31_02399 SM00235 Zinc-dependent metalloprotease A0O31_02403 SM00849 Metallo-beta-lactamase superfamily A0O31_02406 SM00966 SpoVT / AbrB like domain A0O31_02409 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A0O31_02410 SM00052 Putative diguanylate phosphodiesterase A0O31_02410 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A0O31_02410 SM00091 PAS domain A0O31_02410 SM00267 diguanylate cyclase A0O31_02412 SM00960 Roadblock/LC7 domain A0O31_02419 SM00052 Putative diguanylate phosphodiesterase A0O31_02419 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A0O31_02419 SM00091 PAS domain A0O31_02419 SM00267 diguanylate cyclase A0O31_02421 SM00671 Sel1-like repeats. A0O31_02426 SM00966 SpoVT / AbrB like domain A0O31_02452 SM00950 A0O31_02452 A0O31_02454 SM00387 Histidine kinase-like ATPases A0O31_02454 SM00388 His Kinase A (phosphoacceptor) domain A0O31_02455 SM00448 cheY-homologous receiver domain A0O31_02455 SM00862 Transcriptional regulatory protein, C terminal A0O31_02469 SM00382 ATPases associated with a variety of cellular activities A0O31_02475 SM00354 helix_turn _helix lactose operon repressor A0O31_02480 SM00448 cheY-homologous receiver domain A0O31_02481 SM00387 Histidine kinase-like ATPases A0O31_02482 SM00382 ATPases associated with a variety of cellular activities A0O31_02486 SM00382 ATPases associated with a variety of cellular activities A0O31_02487 SM00382 ATPases associated with a variety of cellular activities A0O31_02491 SM00822 A0O31_02491 A0O31_02496 SM00855 Phosphoglycerate mutase family A0O31_02499 SM00487 DEAD-like helicases superfamily A0O31_02504 SM01101 A0O31_02504 A0O31_02513 SM00833 Cobalamin synthesis protein cobW C-terminal domain A0O31_02518 SM00098 Alkaline phosphatase homologues A0O31_02529 SM00100 Cyclic nucleotide-monophosphate binding domain A0O31_02529 SM00419 helix_turn_helix, cAMP Regulatory protein A0O31_02530 SM00422 helix_turn_helix, mercury resistance A0O31_02535 SM00563 Phosphate acyltransferases A0O31_02548 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A0O31_02554 SM00855 Phosphoglycerate mutase family A0O31_02557 SM00487 DEAD-like helicases superfamily A0O31_02557 SM00490 helicase superfamily c-terminal domain A0O31_02561 SM00530 Helix-turn-helix XRE-family like proteins A0O31_02569 SM00855 Phosphoglycerate mutase family