locus-tag class description Theos_0001 PF11638 DnaA N-terminal domain Theos_0001 PF08299 Bacterial dnaA protein helix-turn-helix Theos_0001 PF00308 Bacterial dnaA protein Theos_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Theos_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Theos_0002 PF02767 DNA polymerase III beta subunit, central domain Theos_0003 PF03952 Enolase, N-terminal domain Theos_0003 PF00113 Enolase, C-terminal TIM barrel domain Theos_0004 PF02887 Pyruvate kinase, alpha/beta domain Theos_0004 PF00224 Pyruvate kinase, barrel domain Theos_0005 PF00082 Subtilase family Theos_0005 PF05922 Peptidase inhibitor I9 Theos_0006 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Theos_0007 PF00156 Phosphoribosyl transferase domain Theos_0009 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Theos_0009 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Theos_0010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Theos_0011 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Theos_0011 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Theos_0011 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Theos_0013 PF02583 Metal-sensitive transcriptional repressor Theos_0014 PF12169 DNA polymerase III subunits gamma and tau domain III Theos_0016 PF00696 Amino acid kinase family Theos_0017 PF01965 DJ-1/PfpI family Theos_0018 PF00293 NUDIX domain Theos_0019 PF03819 MazG nucleotide pyrophosphohydrolase domain Theos_0021 PF04314 Copper chaperone PCu(A)C Theos_0022 PF02630 SCO1/SenC Theos_0023 PF02535 ZIP Zinc transporter Theos_0024 PF00472 RF-1 domain Theos_0024 PF03462 PCRF domain Theos_0025 PF00293 NUDIX domain Theos_0025 PF13344 Haloacid dehalogenase-like hydrolase Theos_0026 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Theos_0027 PF00118 TCP-1/cpn60 chaperonin family Theos_0028 PF00166 Chaperonin 10 Kd subunit Theos_0029 PF00588 SpoU rRNA Methylase family Theos_0029 PF08032 RNA 2'-O ribose methyltransferase substrate binding Theos_0032 PF00342 Phosphoglucose isomerase Theos_0033 PF01293 Phosphoenolpyruvate carboxykinase Theos_0034 PF02628 Cytochrome oxidase assembly protein Theos_0034 PF01040 UbiA prenyltransferase family Theos_0036 PF00510 Cytochrome c oxidase subunit III Theos_0036 PF00115 Cytochrome C and Quinol oxidase polypeptide I Theos_0041 PF00589 Phage integrase family Theos_0041 PF14659 Phage integrase, N-terminal SAM-like domain Theos_0052 PF01070 FMN-dependent dehydrogenase Theos_0053 PF01593 Flavin containing amine oxidoreductase Theos_0054 PF13291 ACT domain Theos_0054 PF04607 Region found in RelA / SpoT proteins Theos_0054 PF02824 TGS domain Theos_0056 PF00924 Mechanosensitive ion channel Theos_0062 PF00486 Transcriptional regulatory protein, C terminal Theos_0062 PF00072 Response regulator receiver domain Theos_0063 PF00512 His Kinase A (phospho-acceptor) domain Theos_0063 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theos_0063 PF00672 HAMP domain Theos_0065 PF01875 Memo-like protein Theos_0072 PF17746 SfsA N-terminal OB domain Theos_0072 PF03749 Sugar fermentation stimulation protein RE domain Theos_0075 PF01235 Sodium:alanine symporter family Theos_0080 PF03129 Anticodon binding domain Theos_0080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Theos_0080 PF04073 Aminoacyl-tRNA editing domain Theos_0081 PF07687 Peptidase dimerisation domain Theos_0081 PF01546 Peptidase family M20/M25/M40 Theos_0082 PF02913 FAD linked oxidases, C-terminal domain Theos_0082 PF01565 FAD binding domain Theos_0083 PF00561 alpha/beta hydrolase fold Theos_0083 PF00364 Biotin-requiring enzyme Theos_0085 PF01592 NifU-like N terminal domain Theos_0086 PF00266 Aminotransferase class-V Theos_0088 PF07731 Multicopper oxidase Theos_0088 PF07732 Multicopper oxidase Theos_0092 PF01209 ubiE/COQ5 methyltransferase family Theos_0094 PF00672 HAMP domain Theos_0094 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theos_0094 PF13426 PAS domain Theos_0094 PF00512 His Kinase A (phospho-acceptor) domain Theos_0095 PF00486 Transcriptional regulatory protein, C terminal Theos_0095 PF00072 Response regulator receiver domain Theos_0097 PF00403 Heavy-metal-associated domain Theos_0098 PF02583 Metal-sensitive transcriptional repressor Theos_0100 PF00403 Heavy-metal-associated domain Theos_0101 PF12704 MacB-like periplasmic core domain Theos_0101 PF02687 FtsX-like permease family Theos_0101 PF00005 ABC transporter Theos_0102 PF00005 ABC transporter Theos_0104 PF13416 Bacterial extracellular solute-binding protein Theos_0105 PF01261 Xylose isomerase-like TIM barrel Theos_0106 PF00034 Cytochrome c Theos_0108 PF00355 Rieske [2Fe-2S] domain Theos_0109 PF13631 Cytochrome b(N-terminal)/b6/petB Theos_0110 PF00355 Rieske [2Fe-2S] domain Theos_0111 PF01458 Uncharacterized protein family (UPF0051) Theos_0112 PF01458 Uncharacterized protein family (UPF0051) Theos_0113 PF00005 ABC transporter Theos_0115 PF00463 Isocitrate lyase family Theos_0116 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theos_0116 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Theos_0118 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Theos_0118 PF02272 DHHA1 domain Theos_0118 PF01411 tRNA synthetases class II (A) Theos_0120 PF03652 Holliday junction resolvase Theos_0122 PF00528 Binding-protein-dependent transport system inner membrane component Theos_0125 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Theos_0125 PF00117 Glutamine amidotransferase class-I Theos_0128 PF00206 Lyase Theos_0128 PF00583 Acetyltransferase (GNAT) family Theos_0128 PF14698 Argininosuccinate lyase C-terminal Theos_0129 PF00206 Lyase Theos_0129 PF14698 Argininosuccinate lyase C-terminal Theos_0130 PF00764 Arginosuccinate synthase Theos_0131 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Theos_0131 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theos_0132 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Theos_0132 PF00364 Biotin-requiring enzyme Theos_0132 PF02817 e3 binding domain Theos_0133 PF16870 2-oxoglutarate dehydrogenase C-terminal Theos_0133 PF00676 Dehydrogenase E1 component Theos_0133 PF02779 Transketolase, pyrimidine binding domain Theos_0133 PF16078 2-oxoglutarate dehydrogenase N-terminus Theos_0134 PF00378 Enoyl-CoA hydratase/isomerase Theos_0135 PF07499 RuvA, C-terminal domain Theos_0135 PF01330 RuvA N terminal domain Theos_0136 PF13419 Haloacid dehalogenase-like hydrolase Theos_0138 PF03641 Possible lysine decarboxylase Theos_0139 PF00582 Universal stress protein family Theos_0140 PF08032 RNA 2'-O ribose methyltransferase substrate binding Theos_0140 PF00588 SpoU rRNA Methylase family Theos_0141 PF01546 Peptidase family M20/M25/M40 Theos_0141 PF07687 Peptidase dimerisation domain Theos_0143 PF00480 ROK family Theos_0152 PF01227 GTP cyclohydrolase I Theos_0153 PF00132 Bacterial transferase hexapeptide (six repeats) Theos_0154 PF00293 NUDIX domain Theos_0157 PF00004 ATPase family associated with various cellular activities (AAA) Theos_0157 PF16193 AAA C-terminal domain Theos_0157 PF12002 MgsA AAA+ ATPase C terminal Theos_0159 PF00528 Binding-protein-dependent transport system inner membrane component Theos_0160 PF02896 PEP-utilising enzyme, TIM barrel domain Theos_0160 PF00391 PEP-utilising enzyme, mobile domain Theos_0160 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Theos_0161 PF02335 Cytochrome c552 Theos_0162 PF03264 NapC/NirT cytochrome c family, N-terminal region Theos_0163 PF02515 CoA-transferase family III Theos_0165 PF00005 ABC transporter Theos_0168 PF02817 e3 binding domain Theos_0168 PF00364 Biotin-requiring enzyme Theos_0168 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Theos_0169 PF17757 UvrB interaction domain Theos_0169 PF04851 Type III restriction enzyme, res subunit Theos_0169 PF00271 Helicase conserved C-terminal domain Theos_0169 PF12344 Ultra-violet resistance protein B Theos_0169 PF02151 UvrB/uvrC motif Theos_0170 PF00395 S-layer homology domain Theos_0171 PF01380 SIS domain Theos_0172 PF00486 Transcriptional regulatory protein, C terminal Theos_0172 PF00072 Response regulator receiver domain Theos_0173 PF07689 KaiB domain Theos_0173 PF00512 His Kinase A (phospho-acceptor) domain Theos_0173 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theos_0174 PF01895 PhoU domain Theos_0175 PF13419 Haloacid dehalogenase-like hydrolase Theos_0178 PF00994 Probable molybdopterin binding domain Theos_0178 PF18146 Damage-inducible protein CinA KH domain Theos_0178 PF02464 Competence-damaged protein Theos_0179 PF02834 LigT like Phosphoesterase Theos_0180 PF00154 recA bacterial DNA recombination protein Theos_0181 PF01966 HD domain Theos_0181 PF00013 KH domain Theos_0181 PF12072 Domain of unknown function (DUF3552) Theos_0183 PF07977 FabA-like domain Theos_0185 PF04565 RNA polymerase Rpb2, domain 3 Theos_0185 PF04560 RNA polymerase Rpb2, domain 7 Theos_0185 PF10385 RNA polymerase beta subunit external 1 domain Theos_0185 PF04561 RNA polymerase Rpb2, domain 2 Theos_0185 PF00562 RNA polymerase Rpb2, domain 6 Theos_0185 PF04563 RNA polymerase beta subunit Theos_0186 PF04997 RNA polymerase Rpb1, domain 1 Theos_0186 PF00623 RNA polymerase Rpb1, domain 2 Theos_0186 PF04983 RNA polymerase Rpb1, domain 3 Theos_0186 PF05000 RNA polymerase Rpb1, domain 4 Theos_0186 PF04998 RNA polymerase Rpb1, domain 5 Theos_0187 PF01008 Initiation factor 2 subunit family Theos_0187 PF00596 Class II Aldolase and Adducin N-terminal domain Theos_0190 PF01547 Bacterial extracellular solute-binding protein Theos_0191 PF00528 Binding-protein-dependent transport system inner membrane component Theos_0192 PF03668 P-loop ATPase protein family Theos_0193 PF01933 Uncharacterised protein family UPF0052 Theos_0198 PF00830 Ribosomal L28 family Theos_0200 PF01594 AI-2E family transporter Theos_0201 PF00860 Permease family Theos_0202 PF01702 Queuine tRNA-ribosyltransferase Theos_0203 PF02086 D12 class N6 adenine-specific DNA methyltransferase Theos_0205 PF04551 GcpE protein Theos_0209 PF00308 Bacterial dnaA protein Theos_0209 PF08299 Bacterial dnaA protein helix-turn-helix Theos_0209 PF11638 DnaA N-terminal domain Theos_0211 PF01676 Metalloenzyme superfamily Theos_0212 PF02457 DisA bacterial checkpoint controller nucleotide-binding Theos_0214 PF01327 Polypeptide deformylase Theos_0215 PF00551 Formyl transferase Theos_0215 PF02911 Formyl transferase, C-terminal domain Theos_0221 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theos_0225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Theos_0227 PF00069 Protein kinase domain Theos_0227 PF13360 PQQ-like domain Theos_0228 PF01042 Endoribonuclease L-PSP Theos_0232 PF03477 ATP cone domain Theos_0234 PF01661 Macro domain Theos_0236 PF00692 dUTPase Theos_0237 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Theos_0238 PF13393 Histidyl-tRNA synthetase Theos_0239 PF01634 ATP phosphoribosyltransferase Theos_0240 PF00588 SpoU rRNA Methylase family Theos_0240 PF12105 SpoU, rRNA methylase, C-terminal Theos_0241 PF01063 Amino-transferase class IV Theos_0242 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Theos_0242 PF03466 LysR substrate binding domain Theos_0243 PF05067 Manganese containing catalase Theos_0244 PF02481 DNA recombination-mediator protein A Theos_0244 PF17782 DprA winged helix domain Theos_0245 PF07650 KH domain Theos_0245 PF01926 50S ribosome-binding GTPase Theos_0246 PF14602 Hexapeptide repeat of succinyl-transferase Theos_0246 PF00132 Bacterial transferase hexapeptide (six repeats) Theos_0246 PF12464 Maltose acetyltransferase Theos_0247 PF00072 Response regulator receiver domain Theos_0247 PF01966 HD domain Theos_0248 PF01268 Formate--tetrahydrofolate ligase Theos_0249 PF00291 Pyridoxal-phosphate dependent enzyme Theos_0251 PF02568 Thiamine biosynthesis protein (ThiI) Theos_0251 PF02926 THUMP domain Theos_0254 PF00829 Ribosomal prokaryotic L21 protein Theos_0255 PF01016 Ribosomal L27 protein Theos_0256 PF01018 GTP1/OBG Theos_0256 PF01926 50S ribosome-binding GTPase Theos_0256 PF09269 Domain of unknown function (DUF1967) Theos_0257 PF01467 Cytidylyltransferase-like Theos_0258 PF01467 Cytidylyltransferase-like Theos_0258 PF01966 HD domain Theos_0262 PF02569 Pantoate-beta-alanine ligase Theos_0263 PF00437 Type II/IV secretion system protein Theos_0264 PF01116 Fructose-bisphosphate aldolase class-II Theos_0266 PF02885 Glycosyl transferase family, helical bundle domain Theos_0266 PF00591 Glycosyl transferase family, a/b domain Theos_0266 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Theos_0267 PF08460 Bacterial SH3 domain Theos_0267 PF01551 Peptidase family M23 Theos_0269 PF17848 Acetyl-coA carboxylase zinc finger domain Theos_0269 PF01039 Carboxyl transferase domain Theos_0270 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Theos_0272 PF00164 Ribosomal protein S12/S23 Theos_0273 PF00177 Ribosomal protein S7p/S5e Theos_0274 PF00679 Elongation factor G C-terminus Theos_0274 PF00009 Elongation factor Tu GTP binding domain Theos_0274 PF03144 Elongation factor Tu domain 2 Theos_0274 PF03764 Elongation factor G, domain IV Theos_0274 PF14492 Elongation Factor G, domain II Theos_0275 PF00009 Elongation factor Tu GTP binding domain Theos_0275 PF03144 Elongation factor Tu domain 2 Theos_0275 PF03143 Elongation factor Tu C-terminal domain Theos_0276 PF00338 Ribosomal protein S10p/S20e Theos_0277 PF00297 Ribosomal protein L3 Theos_0278 PF00573 Ribosomal protein L4/L1 family Theos_0279 PF00276 Ribosomal protein L23 Theos_0280 PF00181 Ribosomal Proteins L2, RNA binding domain Theos_0280 PF03947 Ribosomal Proteins L2, C-terminal domain Theos_0281 PF00203 Ribosomal protein S19 Theos_0282 PF00237 Ribosomal protein L22p/L17e Theos_0283 PF00189 Ribosomal protein S3, C-terminal domain Theos_0283 PF07650 KH domain Theos_0284 PF00252 Ribosomal protein L16p/L10e Theos_0285 PF00831 Ribosomal L29 protein Theos_0286 PF00366 Ribosomal protein S17 Theos_0287 PF00238 Ribosomal protein L14p/L23e Theos_0288 PF00467 KOW motif Theos_0288 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Theos_0289 PF00281 Ribosomal protein L5 Theos_0289 PF00673 ribosomal L5P family C-terminus Theos_0290 PF00253 Ribosomal protein S14p/S29e Theos_0291 PF00410 Ribosomal protein S8 Theos_0292 PF00347 Ribosomal protein L6 Theos_0293 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Theos_0294 PF03719 Ribosomal protein S5, C-terminal domain Theos_0294 PF00333 Ribosomal protein S5, N-terminal domain Theos_0295 PF00327 Ribosomal protein L30p/L7e Theos_0296 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Theos_0297 PF00344 SecY translocase Theos_0299 PF00557 Metallopeptidase family M24 Theos_0300 PF01176 Translation initiation factor 1A / IF-1 Theos_0301 PF00444 Ribosomal protein L36 Theos_0302 PF00416 Ribosomal protein S13/S18 Theos_0303 PF00411 Ribosomal protein S11 Theos_0304 PF00163 Ribosomal protein S4/S9 N-terminal domain Theos_0304 PF01479 S4 domain Theos_0305 PF01000 RNA polymerase Rpb3/RpoA insert domain Theos_0305 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Theos_0305 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Theos_0306 PF01196 Ribosomal protein L17 Theos_0312 PF06971 Putative DNA-binding protein N-terminus Theos_0312 PF02629 CoA binding domain Theos_0314 PF00348 Polyprenyl synthetase Theos_0315 PF01725 Ham1 family Theos_0318 PF14785 Maltose transport system permease protein MalF P2 domain Theos_0318 PF00528 Binding-protein-dependent transport system inner membrane component Theos_0319 PF00528 Binding-protein-dependent transport system inner membrane component Theos_0320 PF02903 Alpha amylase, N-terminal ig-like domain Theos_0320 PF00128 Alpha amylase, catalytic domain Theos_0322 PF00206 Lyase Theos_0322 PF10397 Adenylosuccinate lyase C-terminus Theos_0325 PF01259 SAICAR synthetase Theos_0329 PF02769 AIR synthase related protein, C-terminal domain Theos_0329 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Theos_0329 PF00586 AIR synthase related protein, N-terminal domain Theos_0330 PF00156 Phosphoribosyl transferase domain Theos_0332 PF00464 Serine hydroxymethyltransferase Theos_0335 PF02463 RecF/RecN/SMC N terminal domain Theos_0336 PF00682 HMGL-like Theos_0344 PF13662 Toprim domain Theos_0344 PF02132 RecR protein Theos_0345 PF02575 YbaB/EbfC DNA-binding family Theos_0346 PF00490 Delta-aminolevulinic acid dehydratase Theos_0350 PF03793 PASTA domain Theos_0350 PF00069 Protein kinase domain Theos_0351 PF00072 Response regulator receiver domain Theos_0351 PF00486 Transcriptional regulatory protein, C terminal Theos_0352 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theos_0352 PF00672 HAMP domain Theos_0352 PF00512 His Kinase A (phospho-acceptor) domain Theos_0356 PF13361 UvrD-like helicase C-terminal domain Theos_0356 PF00580 UvrD/REP helicase N-terminal domain Theos_0357 PF01812 5-formyltetrahydrofolate cyclo-ligase family Theos_0360 PF00156 Phosphoribosyl transferase domain Theos_0363 PF01230 HIT domain Theos_0364 PF04055 Radical SAM superfamily Theos_0364 PF00919 Uncharacterized protein family UPF0004 Theos_0365 PF03477 ATP cone domain Theos_0365 PF02867 Ribonucleotide reductase, barrel domain Theos_0365 PF00317 Ribonucleotide reductase, all-alpha domain Theos_0365 PF03477 ATP cone domain Theos_0365 PF00317 Ribonucleotide reductase, all-alpha domain Theos_0365 PF02867 Ribonucleotide reductase, barrel domain Theos_0366 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Theos_0367 PF00459 Inositol monophosphatase family Theos_0368 PF14464 Prokaryotic homologs of the JAB domain Theos_0369 PF03144 Elongation factor Tu domain 2 Theos_0369 PF00009 Elongation factor Tu GTP binding domain Theos_0369 PF14492 Elongation Factor G, domain II Theos_0369 PF03764 Elongation factor G, domain IV Theos_0369 PF00679 Elongation factor G C-terminus Theos_0370 PF17863 AAA lid domain Theos_0370 PF07726 ATPase family associated with various cellular activities (AAA) Theos_0371 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Theos_0371 PF02896 PEP-utilising enzyme, TIM barrel domain Theos_0371 PF00391 PEP-utilising enzyme, mobile domain Theos_0372 PF03006 Haemolysin-III related Theos_0373 PF00072 Response regulator receiver domain Theos_0373 PF00486 Transcriptional regulatory protein, C terminal Theos_0374 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theos_0374 PF00672 HAMP domain Theos_0374 PF00512 His Kinase A (phospho-acceptor) domain Theos_0380 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Theos_0380 PF01488 Shikimate / quinate 5-dehydrogenase Theos_0382 PF02627 Carboxymuconolactone decarboxylase family Theos_0386 PF00072 Response regulator receiver domain Theos_0386 PF00990 Diguanylate cyclase, GGDEF domain Theos_0387 PF02773 S-adenosylmethionine synthetase, C-terminal domain Theos_0387 PF02772 S-adenosylmethionine synthetase, central domain Theos_0387 PF00438 S-adenosylmethionine synthetase, N-terminal domain Theos_0388 PF01177 Asp/Glu/Hydantoin racemase Theos_0389 PF03641 Possible lysine decarboxylase Theos_0391 PF00488 MutS domain V Theos_0391 PF01713 Smr domain Theos_0392 PF17944 Arginine decarboxylase C-terminal helical extension Theos_0392 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Theos_0392 PF17810 Arginine decarboxylase helical bundle domain Theos_0395 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Theos_0395 PF14572 Phosphoribosyl synthetase-associated domain Theos_0396 PF01321 Creatinase/Prolidase N-terminal domain Theos_0396 PF00557 Metallopeptidase family M24 Theos_0397 PF01521 Iron-sulphur cluster biosynthesis Theos_0398 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Theos_0399 PF00528 Binding-protein-dependent transport system inner membrane component Theos_0400 PF12911 N-terminal TM domain of oligopeptide transport permease C Theos_0400 PF00528 Binding-protein-dependent transport system inner membrane component Theos_0401 PF01416 tRNA pseudouridine synthase Theos_0402 PF08402 TOBE domain Theos_0402 PF00005 ABC transporter Theos_0403 PF00528 Binding-protein-dependent transport system inner membrane component Theos_0404 PF01547 Bacterial extracellular solute-binding protein Theos_0407 PF02566 OsmC-like protein Theos_0409 PF00753 Metallo-beta-lactamase superfamily Theos_0411 PF00011 Hsp20/alpha crystallin family Theos_0412 PF00155 Aminotransferase class I and II Theos_0413 PF02390 Putative methyltransferase Theos_0415 PF00072 Response regulator receiver domain Theos_0415 PF01966 HD domain Theos_0416 PF01751 Toprim domain Theos_0416 PF01131 DNA topoisomerase Theos_0416 PF01396 Topoisomerase DNA binding C4 zinc finger Theos_0418 PF04294 VanW like protein Theos_0419 PF01479 S4 domain Theos_0419 PF00849 RNA pseudouridylate synthase Theos_0420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Theos_0420 PF02272 DHHA1 domain Theos_0420 PF01411 tRNA synthetases class II (A) Theos_0422 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theos_0424 PF02021 Uncharacterised protein family UPF0102 Theos_0425 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Theos_0426 PF01926 50S ribosome-binding GTPase Theos_0426 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Theos_0430 PF01648 4'-phosphopantetheinyl transferase superfamily Theos_0431 PF01189 16S rRNA methyltransferase RsmB/F Theos_0431 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF Theos_0431 PF17126 RsmF rRNA methyltransferase first C-terminal domain Theos_0432 PF01761 3-dehydroquinate synthase Theos_0433 PF01202 Shikimate kinase Theos_0434 PF01264 Chorismate synthase Theos_0435 PF03958 Bacterial type II/III secretion system short domain Theos_0435 PF00263 Bacterial type II and III secretion system protein Theos_0440 PF00180 Isocitrate/isopropylmalate dehydrogenase Theos_0442 PF00072 Response regulator receiver domain Theos_0447 PF03309 Type III pantothenate kinase Theos_0449 PF01520 N-acetylmuramoyl-L-alanine amidase Theos_0450 PF00069 Protein kinase domain Theos_0450 PF03793 PASTA domain Theos_0451 PF01734 Patatin-like phospholipase Theos_0452 PF10502 Signal peptidase, peptidase S26 Theos_0454 PF11870 Domain of unknown function (DUF3390) Theos_0454 PF13183 4Fe-4S dicluster domain Theos_0454 PF02589 LUD domain Theos_0455 PF02754 Cysteine-rich domain Theos_0461 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Theos_0461 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Theos_0461 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Theos_0461 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Theos_0464 PF01050 Mannose-6-phosphate isomerase Theos_0464 PF00483 Nucleotidyl transferase Theos_0467 PF01943 Polysaccharide biosynthesis protein Theos_0468 PF03275 UDP-galactopyranose mutase Theos_0470 PF00534 Glycosyl transferases group 1 Theos_0470 PF00535 Glycosyl transferase family 2 Theos_0472 PF13439 Glycosyltransferase Family 4 Theos_0472 PF00534 Glycosyl transferases group 1 Theos_0473 PF13439 Glycosyltransferase Family 4 Theos_0479 PF02397 Bacterial sugar transferase Theos_0481 PF00512 His Kinase A (phospho-acceptor) domain Theos_0481 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theos_0481 PF00672 HAMP domain Theos_0482 PF00072 Response regulator receiver domain Theos_0482 PF00486 Transcriptional regulatory protein, C terminal Theos_0485 PF13545 Crp-like helix-turn-helix domain Theos_0485 PF00027 Cyclic nucleotide-binding domain Theos_0487 PF03091 CutA1 divalent ion tolerance protein Theos_0488 PF03989 DNA gyrase C-terminal domain, beta-propeller Theos_0488 PF00521 DNA gyrase/topoisomerase IV, subunit A Theos_0490 PF01220 Dehydroquinase class II Theos_0491 PF01551 Peptidase family M23 Theos_0492 PF05958 tRNA (Uracil-5-)-methyltransferase Theos_0493 PF00072 Response regulator receiver domain Theos_0493 PF00196 Bacterial regulatory proteins, luxR family Theos_0496 PF00216 Bacterial DNA-binding protein Theos_0498 PF04493 Endonuclease V Theos_0500 PF01238 Phosphomannose isomerase type I Theos_0501 PF00899 ThiF family Theos_0502 PF00285 Citrate synthase, C-terminal domain Theos_0503 PF00664 ABC transporter transmembrane region Theos_0503 PF00005 ABC transporter Theos_0504 PF00664 ABC transporter transmembrane region Theos_0504 PF00005 ABC transporter Theos_0505 PF08245 Mur ligase middle domain Theos_0505 PF02875 Mur ligase family, glutamate ligase domain Theos_0507 PF12911 N-terminal TM domain of oligopeptide transport permease C Theos_0507 PF00528 Binding-protein-dependent transport system inner membrane component Theos_0508 PF00528 Binding-protein-dependent transport system inner membrane component Theos_0509 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Theos_0510 PF00005 ABC transporter Theos_0511 PF12399 Branched-chain amino acid ATP-binding cassette transporter Theos_0511 PF00005 ABC transporter Theos_0512 PF11862 Domain of unknown function (DUF3382) Theos_0512 PF02653 Branched-chain amino acid transport system / permease component Theos_0513 PF02653 Branched-chain amino acid transport system / permease component Theos_0514 PF13458 Periplasmic binding protein Theos_0515 PF00120 Glutamine synthetase, catalytic domain Theos_0515 PF03951 Glutamine synthetase, beta-Grasp domain Theos_0516 PF02872 5'-nucleotidase, C-terminal domain Theos_0516 PF00149 Calcineurin-like phosphoesterase Theos_0518 PF00034 Cytochrome c Theos_0520 PF05192 MutS domain III Theos_0520 PF05190 MutS family domain IV Theos_0520 PF05188 MutS domain II Theos_0520 PF01624 MutS domain I Theos_0520 PF00488 MutS domain V Theos_0521 PF08676 MutL C terminal dimerisation domain Theos_0521 PF01119 DNA mismatch repair protein, C-terminal domain Theos_0522 PF03737 Aldolase/RraA Theos_0523 PF00551 Formyl transferase Theos_0523 PF01842 ACT domain Theos_0524 PF13180 PDZ domain Theos_0524 PF17820 PDZ domain Theos_0526 PF16868 NMT1-like family Theos_0527 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Theos_0528 PF16868 NMT1-like family Theos_0530 PF02350 UDP-N-acetylglucosamine 2-epimerase Theos_0531 PF00953 Glycosyl transferase family 4 Theos_0536 PF00919 Uncharacterized protein family UPF0004 Theos_0536 PF04055 Radical SAM superfamily Theos_0536 PF01938 TRAM domain Theos_0539 PF12804 MobA-like NTP transferase domain Theos_0547 PF05362 Lon protease (S16) C-terminal proteolytic domain Theos_0547 PF02190 ATP-dependent protease La (LON) substrate-binding domain Theos_0547 PF00004 ATPase family associated with various cellular activities (AAA) Theos_0549 PF01180 Dihydroorotate dehydrogenase Theos_0551 PF01979 Amidohydrolase family Theos_0552 PF01850 PIN domain Theos_0554 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Theos_0554 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Theos_0555 PF00156 Phosphoribosyl transferase domain Theos_0557 PF01925 Sulfite exporter TauE/SafE Theos_0558 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Theos_0558 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Theos_0561 PF01523 Putative modulator of DNA gyrase Theos_0562 PF01523 Putative modulator of DNA gyrase Theos_0564 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Theos_0564 PF02770 Acyl-CoA dehydrogenase, middle domain Theos_0564 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Theos_0565 PF00583 Acetyltransferase (GNAT) family Theos_0567 PF04079 Segregation and condensation complex subunit ScpB Theos_0568 PF01300 Telomere recombination Theos_0570 PF00482 Type II secretion system (T2SS), protein F Theos_0573 PF02913 FAD linked oxidases, C-terminal domain Theos_0573 PF01565 FAD binding domain Theos_0574 PF08448 PAS fold Theos_0574 PF00990 Diguanylate cyclase, GGDEF domain Theos_0575 PF02153 Prephenate dehydrogenase Theos_0575 PF01842 ACT domain Theos_0576 PF18152 DAHP synthase ferredoxin-like domain Theos_0576 PF00793 DAHP synthetase I family Theos_0579 PF02621 Menaquinone biosynthesis Theos_0580 PF04055 Radical SAM superfamily Theos_0583 PF00356 Bacterial regulatory proteins, lacI family Theos_0583 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Theos_0584 PF02660 Glycerol-3-phosphate acyltransferase Theos_0585 PF01557 Fumarylacetoacetate (FAA) hydrolase family Theos_0587 PF00551 Formyl transferase Theos_0588 PF02843 Phosphoribosylglycinamide synthetase, C domain Theos_0588 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Theos_0588 PF02844 Phosphoribosylglycinamide synthetase, N domain Theos_0589 PF00929 Exonuclease Theos_0590 PF00072 Response regulator receiver domain Theos_0590 PF00486 Transcriptional regulatory protein, C terminal Theos_0591 PF00672 HAMP domain Theos_0591 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theos_0591 PF00512 His Kinase A (phospho-acceptor) domain Theos_0591 PF13426 PAS domain Theos_0595 PF00474 Sodium:solute symporter family Theos_0597 PF01709 Transcriptional regulator Theos_0598 PF00999 Sodium/hydrogen exchanger family Theos_0598 PF02254 TrkA-N domain Theos_0599 PF13462 Thioredoxin Theos_0600 PF17284 Spermidine synthase tetramerisation domain Theos_0601 PF02675 S-adenosylmethionine decarboxylase Theos_0602 PF17854 FtsK alpha domain Theos_0602 PF01580 FtsK/SpoIIIE family Theos_0602 PF09397 Ftsk gamma domain Theos_0605 PF00571 CBS domain Theos_0606 PF00800 Prephenate dehydratase Theos_0606 PF01817 Chorismate mutase type II Theos_0614 PF02608 ABC transporter substrate-binding protein PnrA-like Theos_0615 PF01653 NAD-dependent DNA ligase adenylation domain Theos_0615 PF00533 BRCA1 C Terminus (BRCT) domain Theos_0615 PF03120 NAD-dependent DNA ligase OB-fold domain Theos_0615 PF12826 Helix-hairpin-helix motif Theos_0616 PF02511 Thymidylate synthase complementing protein Theos_0617 PF00291 Pyridoxal-phosphate dependent enzyme Theos_0618 PF00290 Tryptophan synthase alpha chain Theos_0619 PF04055 Radical SAM superfamily Theos_0622 PF00293 NUDIX domain Theos_0625 PF00171 Aldehyde dehydrogenase family Theos_0626 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Theos_0626 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Theos_0627 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Theos_0627 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Theos_0629 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Theos_0631 PF01916 Deoxyhypusine synthase Theos_0633 PF02621 Menaquinone biosynthesis Theos_0634 PF00027 Cyclic nucleotide-binding domain Theos_0634 PF13545 Crp-like helix-turn-helix domain Theos_0635 PF10079 Bacillithiol biosynthesis BshC Theos_0636 PF08486 Stage II sporulation protein Theos_0637 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Theos_0638 PF00128 Alpha amylase, catalytic domain Theos_0638 PF02903 Alpha amylase, N-terminal ig-like domain Theos_0638 PF16657 Maltogenic Amylase, C-terminal domain Theos_0639 PF00625 Guanylate kinase Theos_0640 PF01192 RNA polymerase Rpb6 Theos_0641 PF04127 DNA / pantothenate metabolism flavoprotein Theos_0641 PF02441 Flavoprotein Theos_0642 PF01316 Arginine repressor, DNA binding domain Theos_0642 PF02863 Arginine repressor, C-terminal domain Theos_0643 PF01914 MarC family integral membrane protein Theos_0644 PF01039 Carboxyl transferase domain Theos_0645 PF00075 RNase H Theos_0647 PF07690 Major Facilitator Superfamily Theos_0651 PF08734 GYD domain Theos_0652 PF00117 Glutamine amidotransferase class-I Theos_0652 PF00958 GMP synthase C terminal domain Theos_0653 PF02664 S-Ribosylhomocysteinase (LuxS) Theos_0654 PF01048 Phosphorylase superfamily Theos_0655 PF14572 Phosphoribosyl synthetase-associated domain Theos_0655 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Theos_0656 PF01386 Ribosomal L25p family Theos_0656 PF14693 Ribosomal protein TL5, C-terminal domain Theos_0657 PF01195 Peptidyl-tRNA hydrolase Theos_0658 PF01820 D-ala D-ala ligase N-terminus Theos_0658 PF07478 D-ala D-ala ligase C-terminus Theos_0659 PF00004 ATPase family associated with various cellular activities (AAA) Theos_0659 PF17862 AAA+ lid domain Theos_0659 PF06480 FtsH Extracellular Theos_0659 PF01434 Peptidase family M41 Theos_0662 PF05496 Holliday junction DNA helicase RuvB P-loop domain Theos_0662 PF05491 RuvB C-terminal winged helix domain Theos_0662 PF17864 RuvB AAA lid domain Theos_0663 PF02548 Ketopantoate hydroxymethyltransferase Theos_0664 PF01479 S4 domain Theos_0664 PF00849 RNA pseudouridylate synthase Theos_0665 PF01555 DNA methylase Theos_0667 PF00155 Aminotransferase class I and II Theos_0668 PF13286 Phosphohydrolase-associated domain Theos_0668 PF01966 HD domain Theos_0669 PF00109 Beta-ketoacyl synthase, N-terminal domain Theos_0669 PF02801 Beta-ketoacyl synthase, C-terminal domain Theos_0670 PF00550 Phosphopantetheine attachment site Theos_0672 PF00698 Acyl transferase domain Theos_0673 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Theos_0673 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Theos_0674 PF01783 Ribosomal L32p protein family Theos_0676 PF00491 Arginase family Theos_0678 PF06271 RDD family Theos_0679 PF01343 Peptidase family S49 Theos_0680 PF17785 PUA-like domain Theos_0680 PF10672 S-adenosylmethionine-dependent methyltransferase Theos_0681 PF01434 Peptidase family M41 Theos_0681 PF06480 FtsH Extracellular Theos_0681 PF17862 AAA+ lid domain Theos_0681 PF00004 ATPase family associated with various cellular activities (AAA) Theos_0682 PF00012 Hsp70 protein Theos_0683 PF01025 GrpE Theos_0684 PF00226 DnaJ domain Theos_0684 PF01556 DnaJ C terminal domain Theos_0686 PF07724 AAA domain (Cdc48 subfamily) Theos_0686 PF00004 ATPase family associated with various cellular activities (AAA) Theos_0686 PF02861 Clp amino terminal domain, pathogenicity island component Theos_0686 PF17871 AAA lid domain Theos_0686 PF10431 C-terminal, D2-small domain, of ClpB protein Theos_0695 PF02080 TrkA-C domain Theos_0696 PF00999 Sodium/hydrogen exchanger family Theos_0699 PF00478 IMP dehydrogenase / GMP reductase domain Theos_0699 PF00571 CBS domain Theos_0700 PF00999 Sodium/hydrogen exchanger family Theos_0701 PF01464 Transglycosylase SLT domain Theos_0702 PF03796 DnaB-like helicase C terminal domain Theos_0702 PF00772 DnaB-like helicase N terminal domain Theos_0703 PF00361 Proton-conducting membrane transporter Theos_0704 PF00361 Proton-conducting membrane transporter Theos_0705 PF00361 Proton-conducting membrane transporter Theos_0705 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Theos_0706 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Theos_0707 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Theos_0708 PF12838 4Fe-4S dicluster domain Theos_0709 PF00146 NADH dehydrogenase Theos_0710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Theos_0710 PF00384 Molybdopterin oxidoreductase Theos_0710 PF01568 Molydopterin dinucleotide binding domain Theos_0710 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Theos_0711 PF10531 SLBB domain Theos_0711 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Theos_0711 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Theos_0713 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Theos_0714 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Theos_0715 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Theos_0716 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Theos_0717 PF00398 Ribosomal RNA adenine dimethylase Theos_0719 PF04098 Rad52/22 family double-strand break repair protein Theos_0727 PF02769 AIR synthase related protein, C-terminal domain Theos_0727 PF00586 AIR synthase related protein, N-terminal domain Theos_0728 PF00881 Nitroreductase family Theos_0729 PF00155 Aminotransferase class I and II Theos_0730 PF00475 Imidazoleglycerol-phosphate dehydratase Theos_0731 PF00117 Glutamine amidotransferase class-I Theos_0732 PF00294 pfkB family carbohydrate kinase Theos_0733 PF14535 AMP-binding enzyme C-terminal domain Theos_0733 PF00501 AMP-binding enzyme Theos_0734 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Theos_0734 PF02222 ATP-grasp domain Theos_0735 PF00731 AIR carboxylase Theos_0739 PF03741 Integral membrane protein TerC family Theos_0740 PF01883 Iron-sulfur cluster assembly protein Theos_0741 PF00390 Malic enzyme, N-terminal domain Theos_0741 PF03949 Malic enzyme, NAD binding domain Theos_0744 PF01571 Aminomethyltransferase folate-binding domain Theos_0744 PF08669 Glycine cleavage T-protein C-terminal barrel domain Theos_0745 PF01597 Glycine cleavage H-protein Theos_0746 PF02347 Glycine cleavage system P-protein Theos_0747 PF02347 Glycine cleavage system P-protein Theos_0748 PF00581 Rhodanese-like domain Theos_0750 PF13247 4Fe-4S dicluster domain Theos_0751 PF01568 Molydopterin dinucleotide binding domain Theos_0751 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Theos_0751 PF00384 Molybdopterin oxidoreductase Theos_0751 PF10518 TAT (twin-arginine translocation) pathway signal sequence Theos_0753 PF00196 Bacterial regulatory proteins, luxR family Theos_0753 PF00072 Response regulator receiver domain Theos_0754 PF07730 Histidine kinase Theos_0754 PF05231 MASE1 Theos_0754 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theos_0755 PF06574 FAD synthetase Theos_0755 PF01687 Riboflavin kinase Theos_0756 PF00293 NUDIX domain Theos_0758 PF07969 Amidohydrolase family Theos_0760 PF04545 Sigma-70, region 4 Theos_0760 PF04539 Sigma-70 region 3 Theos_0760 PF00140 Sigma-70 factor, region 1.2 Theos_0760 PF04542 Sigma-70 region 2 Theos_0761 PF08468 Methyltransferase small domain N-terminal Theos_0761 PF05175 Methyltransferase small domain Theos_0762 PF01842 ACT domain Theos_0762 PF00696 Amino acid kinase family Theos_0762 PF13840 ACT domain Theos_0763 PF00156 Phosphoribosyl transferase domain Theos_0764 PF00056 lactate/malate dehydrogenase, NAD binding domain Theos_0764 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Theos_0765 PF00549 CoA-ligase Theos_0765 PF02629 CoA binding domain Theos_0766 PF08442 ATP-grasp domain Theos_0766 PF00549 CoA-ligase Theos_0767 PF01938 TRAM domain Theos_0768 PF18073 Rubredoxin metal binding domain Theos_0769 PF00004 ATPase family associated with various cellular activities (AAA) Theos_0769 PF07724 AAA domain (Cdc48 subfamily) Theos_0769 PF10431 C-terminal, D2-small domain, of ClpB protein Theos_0769 PF02861 Clp amino terminal domain, pathogenicity island component Theos_0769 PF17871 AAA lid domain Theos_0770 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Theos_0770 PF03129 Anticodon binding domain Theos_0771 PF02774 Semialdehyde dehydrogenase, dimerisation domain Theos_0771 PF01118 Semialdehyde dehydrogenase, NAD binding domain Theos_0772 PF01728 FtsJ-like methyltransferase Theos_0772 PF01479 S4 domain Theos_0775 PF00749 tRNA synthetases class I (E and Q), catalytic domain Theos_0775 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Theos_0775 PF02637 GatB domain Theos_0776 PF00378 Enoyl-CoA hydratase/isomerase Theos_0777 PF05198 Translation initiation factor IF-3, N-terminal domain Theos_0777 PF00707 Translation initiation factor IF-3, C-terminal domain Theos_0778 PF01632 Ribosomal protein L35 Theos_0779 PF00453 Ribosomal protein L20 Theos_0781 PF02660 Glycerol-3-phosphate acyltransferase Theos_0782 PF01048 Phosphorylase superfamily Theos_0783 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Theos_0783 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Theos_0784 PF00206 Lyase Theos_0784 PF10415 Fumarase C C-terminus Theos_0785 PF00108 Thiolase, N-terminal domain Theos_0785 PF02803 Thiolase, C-terminal domain Theos_0788 PF01048 Phosphorylase superfamily Theos_0789 PF01168 Alanine racemase, N-terminal domain Theos_0793 PF16360 GTP-binding GTPase Middle Region Theos_0793 PF13167 GTP-binding GTPase N-terminal Theos_0793 PF01926 50S ribosome-binding GTPase Theos_0794 PF00708 Acylphosphatase Theos_0796 PF08240 Alcohol dehydrogenase GroES-like domain Theos_0796 PF00107 Zinc-binding dehydrogenase Theos_0797 PF07995 Glucose / Sorbosone dehydrogenase Theos_0799 PF03746 LamB/YcsF family Theos_0800 PF01008 Initiation factor 2 subunit family Theos_0805 PF12320 Type 5 capsule protein repressor C-terminal domain Theos_0805 PF00149 Calcineurin-like phosphoesterase Theos_0806 PF13476 AAA domain Theos_0808 PF03023 Lipid II flippase MurJ Theos_0809 PF00501 AMP-binding enzyme Theos_0809 PF13193 AMP-binding enzyme C-terminal domain Theos_0809 PF16177 Acetyl-coenzyme A synthetase N-terminus Theos_0810 PF00211 Adenylate and Guanylate cyclase catalytic domain Theos_0810 PF00069 Protein kinase domain Theos_0814 PF10672 S-adenosylmethionine-dependent methyltransferase Theos_0814 PF17785 PUA-like domain Theos_0816 PF01496 V-type ATPase 116kDa subunit family Theos_0816 PF18670 V-type ATPase subunit I, N-terminal domain Theos_0818 PF01991 ATP synthase (E/31 kDa) subunit Theos_0819 PF01992 ATP synthase (C/AC39) subunit Theos_0820 PF01990 ATP synthase (F/14-kDa) subunit Theos_0821 PF02874 ATP synthase alpha/beta family, beta-barrel domain Theos_0821 PF16886 ATPsynthase alpha/beta subunit N-term extension Theos_0821 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Theos_0822 PF02874 ATP synthase alpha/beta family, beta-barrel domain Theos_0822 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Theos_0823 PF01813 ATP synthase subunit D Theos_0828 PF03787 RAMP superfamily Theos_0830 PF03787 RAMP superfamily Theos_0834 PF09827 CRISPR associated protein Cas2 Theos_0835 PF01867 CRISPR associated protein Cas1 Theos_0837 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Theos_0837 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Theos_0838 PF01266 FAD dependent oxidoreductase Theos_0838 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Theos_0839 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Theos_0839 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Theos_0840 PF01053 Cys/Met metabolism PLP-dependent enzyme Theos_0842 PF00005 ABC transporter Theos_0844 PF16868 NMT1-like family Theos_0851 PF00005 ABC transporter Theos_0854 PF02608 ABC transporter substrate-binding protein PnrA-like Theos_0856 PF00578 AhpC/TSA family Theos_0857 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Theos_0858 PF01588 Putative tRNA binding domain Theos_0858 PF00133 tRNA synthetases class I (I, L, M and V) Theos_0858 PF09334 tRNA synthetases class I (M) Theos_0860 PF03572 Peptidase family S41 Theos_0860 PF17820 PDZ domain Theos_0860 PF01471 Putative peptidoglycan binding domain Theos_0861 PF00005 ABC transporter Theos_0862 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Theos_0862 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Theos_0865 PF01925 Sulfite exporter TauE/SafE Theos_0866 PF00581 Rhodanese-like domain Theos_0867 PF00753 Metallo-beta-lactamase superfamily Theos_0869 PF00581 Rhodanese-like domain Theos_0870 PF08534 Redoxin Theos_0871 PF04293 SpoVR like protein Theos_0872 PF04285 Protein of unknown function (DUF444) Theos_0873 PF08298 PrkA AAA domain Theos_0873 PF06798 PrkA serine protein kinase C-terminal domain Theos_0875 PF00753 Metallo-beta-lactamase superfamily Theos_0877 PF02631 RecX family Theos_0882 PF13277 YmdB-like protein Theos_0883 PF00311 Phosphoenolpyruvate carboxylase Theos_0884 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Theos_0884 PF01488 Shikimate / quinate 5-dehydrogenase Theos_0884 PF08501 Shikimate dehydrogenase substrate binding domain Theos_0887 PF01205 Uncharacterized protein family UPF0029 Theos_0888 PF09281 Taq polymerase, exonuclease Theos_0888 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Theos_0888 PF00476 DNA polymerase family A Theos_0888 PF01367 5'-3' exonuclease, C-terminal SAM fold Theos_0891 PF00196 Bacterial regulatory proteins, luxR family Theos_0894 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Theos_0894 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Theos_0894 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Theos_0894 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Theos_0896 PF02547 Queuosine biosynthesis protein Theos_0897 PF03747 ADP-ribosylglycohydrolase Theos_0898 PF03448 MgtE intracellular N domain Theos_0898 PF00571 CBS domain Theos_0898 PF01769 Divalent cation transporter Theos_0899 PF02978 Signal peptide binding domain Theos_0899 PF02881 SRP54-type protein, helical bundle domain Theos_0899 PF00448 SRP54-type protein, GTPase domain Theos_0900 PF00886 Ribosomal protein S16 Theos_0902 PF05239 PRC-barrel domain Theos_0902 PF01782 RimM N-terminal domain Theos_0903 PF01746 tRNA (Guanine-1)-methyltransferase Theos_0904 PF01245 Ribosomal protein L19 Theos_0905 PF00196 Bacterial regulatory proteins, luxR family Theos_0905 PF00072 Response regulator receiver domain Theos_0906 PF03313 Serine dehydratase alpha chain Theos_0907 PF00581 Rhodanese-like domain Theos_0908 PF04298 Putative neutral zinc metallopeptidase Theos_0910 PF00578 AhpC/TSA family Theos_0910 PF10417 C-terminal domain of 1-Cys peroxiredoxin Theos_0912 PF02463 RecF/RecN/SMC N terminal domain Theos_0912 PF06470 SMC proteins Flexible Hinge Domain Theos_0915 PF01668 SmpB protein Theos_0916 PF00795 Carbon-nitrogen hydrolase Theos_0917 PF02632 BioY family Theos_0919 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Theos_0919 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Theos_0920 PF00162 Phosphoglycerate kinase Theos_0921 PF02033 Ribosome-binding factor A Theos_0922 PF03061 Thioesterase superfamily Theos_0923 PF00202 Aminotransferase class-III Theos_0924 PF00773 RNB domain Theos_0924 PF00575 S1 RNA binding domain Theos_0924 PF17876 Cold shock domain Theos_0924 PF08206 Ribonuclease B OB domain Theos_0925 PF01875 Memo-like protein Theos_0926 PF01966 HD domain Theos_0926 PF12627 Probable RNA and SrmB- binding site of polymerase A Theos_0926 PF01743 Poly A polymerase head domain Theos_0927 PF01121 Dephospho-CoA kinase Theos_0930 PF18395 Cas3 C-terminal domain Theos_0930 PF18019 HD domain Theos_0931 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) Theos_0932 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) Theos_0933 PF09344 CT1975-like protein Theos_0935 PF08798 CRISPR associated protein Theos_0936 PF01867 CRISPR associated protein Cas1 Theos_0937 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) Theos_0941 PF01467 Cytidylyltransferase-like Theos_0942 PF01808 AICARFT/IMPCHase bienzyme Theos_0942 PF02142 MGS-like domain Theos_0943 PF12631 MnmE helical domain Theos_0943 PF01926 50S ribosome-binding GTPase Theos_0943 PF10396 GTP-binding protein TrmE N-terminus Theos_0944 PF00202 Aminotransferase class-III Theos_0948 PF02780 Transketolase, C-terminal domain Theos_0948 PF02779 Transketolase, pyrimidine binding domain Theos_0949 PF00676 Dehydrogenase E1 component Theos_0953 PF00121 Triosephosphate isomerase Theos_0954 PF00487 Fatty acid desaturase Theos_0955 PF00563 EAL domain Theos_0955 PF12792 CSS motif domain associated with EAL Theos_0956 PF02580 D-Tyr-tRNA(Tyr) deacylase Theos_0957 PF02645 Uncharacterised protein, DegV family COG1307 Theos_0958 PF02645 Uncharacterised protein, DegV family COG1307 Theos_0959 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Theos_0959 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Theos_0959 PF01842 ACT domain Theos_0966 PF00005 ABC transporter Theos_0968 PF13556 PucR C-terminal helix-turn-helix domain Theos_0968 PF17853 GGDEF-like domain Theos_0969 PF00701 Dihydrodipicolinate synthetase family Theos_0970 PF01557 Fumarylacetoacetate (FAA) hydrolase family Theos_0971 PF00171 Aldehyde dehydrogenase family Theos_0972 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal Theos_0972 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal Theos_0973 PF01613 Flavin reductase like domain Theos_0974 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Theos_0977 PF12399 Branched-chain amino acid ATP-binding cassette transporter Theos_0977 PF00005 ABC transporter Theos_0978 PF00005 ABC transporter Theos_0979 PF03061 Thioesterase superfamily Theos_0980 PF00501 AMP-binding enzyme Theos_0980 PF14535 AMP-binding enzyme C-terminal domain Theos_0983 PF07690 Major Facilitator Superfamily Theos_0984 PF02682 Carboxyltransferase domain, subdomain C and D Theos_0990 PF05138 Phenylacetic acid catabolic protein Theos_0994 PF00171 Aldehyde dehydrogenase family Theos_0994 PF01575 MaoC like domain Theos_0995 PF01266 FAD dependent oxidoreductase Theos_1000 PF00082 Subtilase family Theos_1000 PF05922 Peptidase inhibitor I9 Theos_1002 PF01494 FAD binding domain Theos_1003 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Theos_1004 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Theos_1005 PF03480 Bacterial extracellular solute-binding protein, family 7 Theos_1007 PF02803 Thiolase, C-terminal domain Theos_1007 PF00108 Thiolase, N-terminal domain Theos_1008 PF03190 Protein of unknown function, DUF255 Theos_1009 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Theos_1009 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Theos_1011 PF02445 Quinolinate synthetase A protein Theos_1012 PF00890 FAD binding domain Theos_1012 PF02910 Fumarate reductase flavoprotein C-term Theos_1013 PF00210 Ferritin-like domain Theos_1014 PF01638 HxlR-like helix-turn-helix Theos_1016 PF01950 Fructose-1,6-bisphosphatase Theos_1017 PF00589 Phage integrase family Theos_1017 PF02899 Phage integrase, N-terminal SAM-like domain Theos_1018 PF00176 SNF2 family N-terminal domain Theos_1018 PF18337 RapA N-terminal Tudor like domain Theos_1018 PF18339 RapA N-terminal Tudor like domain 1 Theos_1018 PF12137 RNA polymerase recycling family C-terminal Theos_1018 PF00271 Helicase conserved C-terminal domain Theos_1020 PF00270 DEAD/DEAH box helicase Theos_1020 PF09369 Domain of unknown function (DUF1998) Theos_1020 PF00271 Helicase conserved C-terminal domain Theos_1021 PF00395 S-layer homology domain Theos_1024 PF02770 Acyl-CoA dehydrogenase, middle domain Theos_1024 PF12806 Acetyl-CoA dehydrogenase C-terminal like Theos_1024 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Theos_1024 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Theos_1025 PF07694 5TMR of 5TMR-LYT Theos_1025 PF00990 Diguanylate cyclase, GGDEF domain Theos_1026 PF00563 EAL domain Theos_1026 PF00990 Diguanylate cyclase, GGDEF domain Theos_1026 PF03707 Bacterial signalling protein N terminal repeat Theos_1027 PF00072 Response regulator receiver domain Theos_1028 PF01883 Iron-sulfur cluster assembly protein Theos_1032 PF00037 4Fe-4S binding domain Theos_1036 PF07690 Major Facilitator Superfamily Theos_1037 PF07690 Major Facilitator Superfamily Theos_1038 PF02665 Nitrate reductase gamma subunit Theos_1040 PF13247 4Fe-4S dicluster domain Theos_1040 PF14711 Respiratory nitrate reductase beta C-terminal Theos_1041 PF01568 Molydopterin dinucleotide binding domain Theos_1041 PF14710 Respiratory nitrate reductase alpha N-terminal Theos_1041 PF00384 Molybdopterin oxidoreductase Theos_1044 PF13545 Crp-like helix-turn-helix domain Theos_1044 PF00027 Cyclic nucleotide-binding domain Theos_1046 PF07670 Nucleoside recognition Theos_1046 PF07664 Ferrous iron transport protein B C terminus Theos_1046 PF17910 FeoB cytosolic helical domain Theos_1046 PF02421 Ferrous iron transport protein B Theos_1050 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theos_1052 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Theos_1053 PF07732 Multicopper oxidase Theos_1054 PF04304 Protein of unknown function (DUF454) Theos_1056 PF00115 Cytochrome C and Quinol oxidase polypeptide I Theos_1057 PF00034 Cytochrome c Theos_1063 PF13180 PDZ domain Theos_1064 PF03576 Peptidase family S58 Theos_1066 PF08240 Alcohol dehydrogenase GroES-like domain Theos_1066 PF00107 Zinc-binding dehydrogenase Theos_1067 PF07726 ATPase family associated with various cellular activities (AAA) Theos_1067 PF17863 AAA lid domain Theos_1069 PF13519 von Willebrand factor type A domain Theos_1070 PF07584 Aerotolerance regulator N-terminal Theos_1070 PF13519 von Willebrand factor type A domain Theos_1072 PF00106 short chain dehydrogenase Theos_1074 PF01053 Cys/Met metabolism PLP-dependent enzyme Theos_1075 PF00561 alpha/beta hydrolase fold Theos_1077 PF00106 short chain dehydrogenase Theos_1079 PF18357 Diphteria toxin repressor SH3 domain Theos_1079 PF02742 Iron dependent repressor, metal binding and dimerisation domain Theos_1079 PF01325 Iron dependent repressor, N-terminal DNA binding domain Theos_1081 PF00144 Beta-lactamase Theos_1081 PF07930 D-aminopeptidase, domain B Theos_1084 PF00005 ABC transporter Theos_1085 PF01032 FecCD transport family Theos_1087 PF00480 ROK family Theos_1089 PF00528 Binding-protein-dependent transport system inner membrane component Theos_1090 PF00528 Binding-protein-dependent transport system inner membrane component Theos_1093 PF00107 Zinc-binding dehydrogenase Theos_1093 PF08240 Alcohol dehydrogenase GroES-like domain Theos_1094 PF02423 Ornithine cyclodeaminase/mu-crystallin family Theos_1097 PF04452 RNA methyltransferase Theos_1100 PF01883 Iron-sulfur cluster assembly protein Theos_1100 PF10609 NUBPL iron-transfer P-loop NTPase Theos_1108 PF00227 Proteasome subunit Theos_1109 PF10431 C-terminal, D2-small domain, of ClpB protein Theos_1109 PF07724 AAA domain (Cdc48 subfamily) Theos_1109 PF00004 ATPase family associated with various cellular activities (AAA) Theos_1110 PF01739 CheR methyltransferase, SAM binding domain Theos_1111 PF02634 FdhD/NarQ family Theos_1112 PF02416 mttA/Hcf106 family Theos_1118 PF02381 MraZ protein, putative antitoxin-like Theos_1119 PF01795 MraW methylase family Theos_1121 PF00905 Penicillin binding protein transpeptidase domain Theos_1121 PF03717 Penicillin-binding Protein dimerisation domain Theos_1122 PF02875 Mur ligase family, glutamate ligase domain Theos_1122 PF08245 Mur ligase middle domain Theos_1122 PF01225 Mur ligase family, catalytic domain Theos_1124 PF00953 Glycosyl transferase family 4 Theos_1125 PF02875 Mur ligase family, glutamate ligase domain Theos_1125 PF08245 Mur ligase middle domain Theos_1126 PF01098 Cell cycle protein Theos_1127 PF03033 Glycosyltransferase family 28 N-terminal domain Theos_1127 PF04101 Glycosyltransferase family 28 C-terminal domain Theos_1128 PF01225 Mur ligase family, catalytic domain Theos_1128 PF02875 Mur ligase family, glutamate ligase domain Theos_1128 PF08245 Mur ligase middle domain Theos_1129 PF01565 FAD binding domain Theos_1129 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Theos_1131 PF02491 SHS2 domain inserted in FTSA Theos_1132 PF00091 Tubulin/FtsZ family, GTPase domain Theos_1132 PF12327 FtsZ family, C-terminal domain Theos_1133 PF02075 Crossover junction endodeoxyribonuclease RuvC Theos_1140 PF04143 Sulphur transport Theos_1141 PF16363 GDP-mannose 4,6 dehydratase Theos_1143 PF00027 Cyclic nucleotide-binding domain Theos_1143 PF13545 Crp-like helix-turn-helix domain Theos_1144 PF13411 MerR HTH family regulatory protein Theos_1144 PF02607 B12 binding domain Theos_1146 PF00875 DNA photolyase Theos_1146 PF03441 FAD binding domain of DNA photolyase Theos_1148 PF00067 Cytochrome P450 Theos_1151 PF00535 Glycosyl transferase family 2 Theos_1152 PF02130 Uncharacterized protein family UPF0054 Theos_1153 PF01219 Prokaryotic diacylglycerol kinase Theos_1155 PF01272 Transcription elongation factor, GreA/GreB, C-term Theos_1155 PF03449 Transcription elongation factor, N-terminal Theos_1156 PF01336 OB-fold nucleic acid binding domain Theos_1156 PF00152 tRNA synthetases class II (D, K and N) Theos_1157 PF16916 Dimerisation domain of Zinc Transporter Theos_1157 PF01545 Cation efflux family Theos_1159 PF02310 B12 binding domain Theos_1162 PF12706 Beta-lactamase superfamily domain Theos_1163 PF00092 von Willebrand factor type A domain Theos_1164 PF00925 GTP cyclohydrolase II Theos_1164 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Theos_1165 PF00677 Lumazine binding domain Theos_1167 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Theos_1167 PF01872 RibD C-terminal domain Theos_1168 PF02576 RimP N-terminal domain Theos_1168 PF17384 RimP C-terminal SH3 domain Theos_1169 PF08529 NusA N-terminal domain Theos_1169 PF00575 S1 RNA binding domain Theos_1169 PF13184 NusA-like KH domain Theos_1170 PF00009 Elongation factor Tu GTP binding domain Theos_1170 PF11987 Translation-initiation factor 2 Theos_1170 PF04760 Translation initiation factor IF-2, N-terminal region Theos_1172 PF07549 SecD/SecF GG Motif Theos_1172 PF02355 Protein export membrane protein Theos_1173 PF02515 CoA-transferase family III Theos_1174 PF00106 short chain dehydrogenase Theos_1175 PF02803 Thiolase, C-terminal domain Theos_1175 PF00108 Thiolase, N-terminal domain Theos_1176 PF02770 Acyl-CoA dehydrogenase, middle domain Theos_1176 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Theos_1176 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Theos_1178 PF01734 Patatin-like phospholipase Theos_1179 PF12728 Helix-turn-helix domain Theos_1181 PF00218 Indole-3-glycerol phosphate synthase Theos_1182 PF00977 Histidine biosynthesis protein Theos_1184 PF01368 DHH family Theos_1184 PF02272 DHHA1 domain Theos_1184 PF17768 RecJ OB domain Theos_1186 PF10458 Valyl tRNA synthetase tRNA binding arm Theos_1186 PF00133 tRNA synthetases class I (I, L, M and V) Theos_1186 PF08264 Anticodon-binding domain of tRNA Theos_1187 PF00528 Binding-protein-dependent transport system inner membrane component Theos_1188 PF00497 Bacterial extracellular solute-binding proteins, family 3 Theos_1189 PF00343 Carbohydrate phosphorylase Theos_1189 PF11897 Protein of unknown function (DUF3417) Theos_1190 PF02386 Cation transport protein Theos_1191 PF02254 TrkA-N domain Theos_1191 PF02080 TrkA-C domain Theos_1192 PF00919 Uncharacterized protein family UPF0004 Theos_1192 PF18693 TRAM domain Theos_1192 PF04055 Radical SAM superfamily Theos_1194 PF04227 Indigoidine synthase A like protein Theos_1197 PF01451 Low molecular weight phosphotyrosine protein phosphatase Theos_1198 PF00672 HAMP domain Theos_1198 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theos_1198 PF07730 Histidine kinase Theos_1199 PF00588 SpoU rRNA Methylase family Theos_1200 PF00905 Penicillin binding protein transpeptidase domain Theos_1200 PF00912 Transglycosylase Theos_1203 PF01926 50S ribosome-binding GTPase Theos_1203 PF06071 Protein of unknown function (DUF933) Theos_1204 PF01791 DeoC/LacD family aldolase Theos_1205 PF13091 PLD-like domain Theos_1206 PF02545 Maf-like protein Theos_1209 PF00905 Penicillin binding protein transpeptidase domain Theos_1209 PF03717 Penicillin-binding Protein dimerisation domain Theos_1217 PF01960 ArgJ family Theos_1218 PF02774 Semialdehyde dehydrogenase, dimerisation domain Theos_1218 PF01118 Semialdehyde dehydrogenase, NAD binding domain Theos_1220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Theos_1220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Theos_1222 PF02660 Glycerol-3-phosphate acyltransferase Theos_1224 PF00005 ABC transporter Theos_1227 PF08502 LeuA allosteric (dimerisation) domain Theos_1227 PF00682 HMGL-like Theos_1228 PF00682 HMGL-like Theos_1228 PF08502 LeuA allosteric (dimerisation) domain Theos_1229 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Theos_1229 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Theos_1230 PF10369 Small subunit of acetolactate synthase Theos_1231 PF00205 Thiamine pyrophosphate enzyme, central domain Theos_1231 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Theos_1231 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Theos_1233 PF03741 Integral membrane protein TerC family Theos_1236 PF07963 Prokaryotic N-terminal methylation motif Theos_1236 PF00114 Pilin (bacterial filament) Theos_1240 PF08334 Type II secretion system (T2SS), protein G Theos_1240 PF07963 Prokaryotic N-terminal methylation motif Theos_1244 PF05685 Putative restriction endonuclease Theos_1247 PF00579 tRNA synthetases class I (W and Y) Theos_1249 PF00330 Aconitase family (aconitate hydratase) Theos_1250 PF00694 Aconitase C-terminal domain Theos_1251 PF00180 Isocitrate/isopropylmalate dehydrogenase Theos_1255 PF00920 Dehydratase family Theos_1256 PF00034 Cytochrome c Theos_1257 PF13416 Bacterial extracellular solute-binding protein Theos_1258 PF00528 Binding-protein-dependent transport system inner membrane component Theos_1259 PF00528 Binding-protein-dependent transport system inner membrane component Theos_1260 PF00005 ABC transporter Theos_1260 PF08402 TOBE domain Theos_1261 PF01098 Cell cycle protein Theos_1262 PF03776 Septum formation topological specificity factor MinE Theos_1263 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Theos_1264 PF01638 HxlR-like helix-turn-helix Theos_1268 PF00501 AMP-binding enzyme Theos_1268 PF13193 AMP-binding enzyme C-terminal domain Theos_1268 PF16177 Acetyl-coenzyme A synthetase N-terminus Theos_1269 PF16177 Acetyl-coenzyme A synthetase N-terminus Theos_1269 PF00501 AMP-binding enzyme Theos_1269 PF13193 AMP-binding enzyme C-terminal domain Theos_1270 PF13193 AMP-binding enzyme C-terminal domain Theos_1270 PF00501 AMP-binding enzyme Theos_1270 PF16177 Acetyl-coenzyme A synthetase N-terminus Theos_1271 PF07516 SecA Wing and Scaffold domain Theos_1271 PF01043 SecA preprotein cross-linking domain Theos_1271 PF07517 SecA DEAD-like domain Theos_1272 PF00814 Glycoprotease family Theos_1276 PF09369 Domain of unknown function (DUF1998) Theos_1276 PF00271 Helicase conserved C-terminal domain Theos_1276 PF00270 DEAD/DEAH box helicase Theos_1279 PF08275 DNA primase catalytic core, N-terminal domain Theos_1279 PF13662 Toprim domain Theos_1279 PF01807 CHC2 zinc finger Theos_1280 PF02446 4-alpha-glucanotransferase Theos_1281 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Theos_1281 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Theos_1282 PF00892 EamA-like transporter family Theos_1283 PF00675 Insulinase (Peptidase family M16) Theos_1283 PF05193 Peptidase M16 inactive domain Theos_1284 PF05193 Peptidase M16 inactive domain Theos_1284 PF00675 Insulinase (Peptidase family M16) Theos_1285 PF17191 RecG wedge domain Theos_1285 PF00271 Helicase conserved C-terminal domain Theos_1285 PF00270 DEAD/DEAH box helicase Theos_1289 PF00106 short chain dehydrogenase Theos_1290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Theos_1290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Theos_1292 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Theos_1292 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Theos_1293 PF01261 Xylose isomerase-like TIM barrel Theos_1294 PF00480 ROK family Theos_1295 PF00005 ABC transporter Theos_1296 PF02653 Branched-chain amino acid transport system / permease component Theos_1297 PF13407 Periplasmic binding protein domain Theos_1302 PF00589 Phage integrase family Theos_1302 PF14659 Phage integrase, N-terminal SAM-like domain Theos_1306 PF01555 DNA methylase Theos_1312 PF14659 Phage integrase, N-terminal SAM-like domain Theos_1312 PF00589 Phage integrase family Theos_1322 PF01555 DNA methylase Theos_1322 PF18755 Restriction Enzyme Adenine Methylase Associated Theos_1326 PF14659 Phage integrase, N-terminal SAM-like domain Theos_1326 PF00589 Phage integrase family Theos_1328 PF00318 Ribosomal protein S2 Theos_1329 PF00889 Elongation factor TS Theos_1330 PF00696 Amino acid kinase family Theos_1331 PF01765 Ribosome recycling factor Theos_1333 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Theos_1333 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Theos_1333 PF13288 DXP reductoisomerase C-terminal domain Theos_1334 PF13180 PDZ domain Theos_1334 PF02163 Peptidase family M50 Theos_1337 PF03807 NADP oxidoreductase coenzyme F420-dependent Theos_1337 PF14748 Pyrroline-5-carboxylate reductase dimerisation Theos_1338 PF01189 16S rRNA methyltransferase RsmB/F Theos_1338 PF01029 NusB family Theos_1339 PF04232 Stage V sporulation protein S (SpoVS) Theos_1340 PF03449 Transcription elongation factor, N-terminal Theos_1340 PF01272 Transcription elongation factor, GreA/GreB, C-term Theos_1342 PF00425 chorismate binding enzyme Theos_1342 PF04715 Anthranilate synthase component I, N terminal region Theos_1344 PF02965 Vitamin B12 dependent methionine synthase, activation domain Theos_1344 PF02607 B12 binding domain Theos_1344 PF02310 B12 binding domain Theos_1344 PF00809 Pterin binding enzyme Theos_1344 PF02574 Homocysteine S-methyltransferase Theos_1345 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Theos_1345 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain Theos_1345 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Theos_1346 PF06689 ClpX C4-type zinc finger Theos_1346 PF10431 C-terminal, D2-small domain, of ClpB protein Theos_1346 PF07724 AAA domain (Cdc48 subfamily) Theos_1347 PF00574 Clp protease Theos_1348 PF05698 Bacterial trigger factor protein (TF) C-terminus Theos_1348 PF05697 Bacterial trigger factor protein (TF) Theos_1352 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Theos_1352 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Theos_1353 PF06153 Cyclic-di-AMP receptor Theos_1354 PF08704 tRNA methyltransferase complex GCD14 subunit Theos_1356 PF02261 Aspartate decarboxylase Theos_1360 PF17932 Tetracyclin repressor-like, C-terminal domain Theos_1360 PF00440 Bacterial regulatory proteins, tetR family Theos_1361 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Theos_1361 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Theos_1361 PF02770 Acyl-CoA dehydrogenase, middle domain Theos_1362 PF00171 Aldehyde dehydrogenase family Theos_1362 PF01575 MaoC like domain Theos_1364 PF00501 AMP-binding enzyme Theos_1364 PF13193 AMP-binding enzyme C-terminal domain Theos_1368 PF01208 Uroporphyrinogen decarboxylase (URO-D) Theos_1369 PF00762 Ferrochelatase Theos_1372 PF00202 Aminotransferase class-III Theos_1373 PF01297 Zinc-uptake complex component A periplasmic Theos_1374 PF10509 Galactokinase galactose-binding signature Theos_1374 PF00288 GHMP kinases N terminal domain Theos_1374 PF08544 GHMP kinases C terminal Theos_1375 PF10531 SLBB domain Theos_1375 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Theos_1375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Theos_1376 PF00384 Molybdopterin oxidoreductase Theos_1376 PF12838 4Fe-4S dicluster domain Theos_1376 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Theos_1376 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Theos_1376 PF01568 Molydopterin dinucleotide binding domain Theos_1377 PF01568 Molydopterin dinucleotide binding domain Theos_1377 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Theos_1377 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Theos_1377 PF12838 4Fe-4S dicluster domain Theos_1377 PF00384 Molybdopterin oxidoreductase Theos_1378 PF03480 Bacterial extracellular solute-binding protein, family 7 Theos_1381 PF16363 GDP-mannose 4,6 dehydratase Theos_1383 PF00206 Lyase Theos_1383 PF14698 Argininosuccinate lyase C-terminal Theos_1386 PF00005 ABC transporter Theos_1387 PF12399 Branched-chain amino acid ATP-binding cassette transporter Theos_1387 PF00005 ABC transporter Theos_1388 PF00501 AMP-binding enzyme Theos_1389 PF11862 Domain of unknown function (DUF3382) Theos_1389 PF02653 Branched-chain amino acid transport system / permease component Theos_1390 PF04260 Protein of unknown function (DUF436) Theos_1391 PF00266 Aminotransferase class-V Theos_1393 PF01741 Large-conductance mechanosensitive channel, MscL Theos_1394 PF03459 TOBE domain Theos_1394 PF00005 ABC transporter Theos_1394 PF17912 MalK OB fold domain Theos_1395 PF00485 Phosphoribulokinase / Uridine kinase family Theos_1399 PF14579 Helix-hairpin-helix motif Theos_1399 PF02811 PHP domain Theos_1399 PF00929 Exonuclease Theos_1399 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Theos_1399 PF07733 Bacterial DNA polymerase III alpha NTPase domain Theos_1399 PF11490 DNA polymerase III polC-type N-terminus II Theos_1400 PF01425 Amidase Theos_1403 PF00265 Thymidine kinase Theos_1404 PF01197 Ribosomal protein L31 Theos_1406 PF12127 SigmaW regulon antibacterial Theos_1408 PF02562 PhoH-like protein Theos_1409 PF00679 Elongation factor G C-terminus Theos_1409 PF00009 Elongation factor Tu GTP binding domain Theos_1409 PF03144 Elongation factor Tu domain 2 Theos_1409 PF06421 GTP-binding protein LepA C-terminus Theos_1410 PF02702 Osmosensitive K+ channel His kinase sensor domain Theos_1410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theos_1410 PF00582 Universal stress protein family Theos_1410 PF00512 His Kinase A (phospho-acceptor) domain Theos_1410 PF13493 Domain of unknown function (DUF4118) Theos_1411 PF01842 ACT domain Theos_1411 PF03315 Serine dehydratase beta chain Theos_1413 PF00701 Dihydrodipicolinate synthetase family Theos_1415 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Theos_1416 PF01595 Cyclin M transmembrane N-terminal domain Theos_1416 PF03471 Transporter associated domain Theos_1416 PF00571 CBS domain Theos_1421 PF00873 AcrB/AcrD/AcrF family Theos_1424 PF00330 Aconitase family (aconitate hydratase) Theos_1424 PF00694 Aconitase C-terminal domain Theos_1427 PF03816 Cell envelope-related transcriptional attenuator domain Theos_1428 PF00082 Subtilase family Theos_1430 PF00815 Histidinol dehydrogenase Theos_1434 PF03167 Uracil DNA glycosylase superfamily Theos_1436 PF00528 Binding-protein-dependent transport system inner membrane component Theos_1437 PF08402 TOBE domain Theos_1437 PF00005 ABC transporter Theos_1440 PF13393 Histidyl-tRNA synthetase Theos_1440 PF03129 Anticodon binding domain Theos_1441 PF01336 OB-fold nucleic acid binding domain Theos_1441 PF00152 tRNA synthetases class II (D, K and N) Theos_1441 PF02938 GAD domain Theos_1442 PF02567 Phenazine biosynthesis-like protein Theos_1444 PF01336 OB-fold nucleic acid binding domain Theos_1444 PF00152 tRNA synthetases class II (D, K and N) Theos_1445 PF01174 SNO glutamine amidotransferase family Theos_1446 PF03851 UV-endonuclease UvdE Theos_1449 PF16197 Ketoacyl-synthetase C-terminal extension Theos_1449 PF08240 Alcohol dehydrogenase GroES-like domain Theos_1449 PF00109 Beta-ketoacyl synthase, N-terminal domain Theos_1449 PF00550 Phosphopantetheine attachment site Theos_1449 PF08659 KR domain Theos_1449 PF02801 Beta-ketoacyl synthase, C-terminal domain Theos_1449 PF14765 Polyketide synthase dehydratase Theos_1449 PF00698 Acyl transferase domain Theos_1450 PF01036 Bacteriorhodopsin-like protein Theos_1453 PF13460 NAD(P)H-binding Theos_1453 PF11066 Protein of unknown function (DUF2867) Theos_1457 PF13847 Methyltransferase domain Theos_1457 PF03551 Transcriptional regulator PadR-like family Theos_1460 PF00403 Heavy-metal-associated domain Theos_1461 PF01022 Bacterial regulatory protein, arsR family Theos_1462 PF01680 SOR/SNZ family Theos_1463 PF08460 Bacterial SH3 domain Theos_1463 PF01551 Peptidase family M23 Theos_1464 PF07497 Rho termination factor, RNA-binding domain Theos_1464 PF07498 Rho termination factor, N-terminal domain Theos_1464 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Theos_1465 PF00923 Transaldolase/Fructose-6-phosphate aldolase Theos_1466 PF08264 Anticodon-binding domain of tRNA Theos_1466 PF00133 tRNA synthetases class I (I, L, M and V) Theos_1467 PF01321 Creatinase/Prolidase N-terminal domain Theos_1467 PF00557 Metallopeptidase family M24 Theos_1468 PF05970 PIF1-like helicase Theos_1469 PF03330 Lytic transglycolase Theos_1470 PF01261 Xylose isomerase-like TIM barrel Theos_1471 PF02163 Peptidase family M50 Theos_1473 PF12627 Probable RNA and SrmB- binding site of polymerase A Theos_1473 PF01743 Poly A polymerase head domain Theos_1473 PF01966 HD domain Theos_1475 PF13439 Glycosyltransferase Family 4 Theos_1475 PF00534 Glycosyl transferases group 1 Theos_1476 PF00004 ATPase family associated with various cellular activities (AAA) Theos_1476 PF05362 Lon protease (S16) C-terminal proteolytic domain Theos_1476 PF02190 ATP-dependent protease La (LON) substrate-binding domain Theos_1478 PF00756 Putative esterase Theos_1479 PF03741 Integral membrane protein TerC family Theos_1481 PF13183 4Fe-4S dicluster domain Theos_1481 PF02754 Cysteine-rich domain Theos_1483 PF02681 Divergent PAP2 family Theos_1484 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Theos_1484 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Theos_1485 PF01029 NusB family Theos_1487 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Theos_1487 PF00289 Biotin carboxylase, N-terminal domain Theos_1487 PF02785 Biotin carboxylase C-terminal domain Theos_1488 PF00364 Biotin-requiring enzyme Theos_1489 PF08207 Elongation factor P (EF-P) KOW-like domain Theos_1489 PF01132 Elongation factor P (EF-P) OB domain Theos_1489 PF09285 Elongation factor P, C-terminal Theos_1493 PF00491 Arginase family Theos_1496 PF00025 ADP-ribosylation factor family Theos_1497 PF08113 Cytochrome c oxidase subunit IIa family Theos_1498 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Theos_1498 PF09125 Cytochrome C oxidase subunit II, transmembrane Theos_1499 PF00115 Cytochrome C and Quinol oxidase polypeptide I Theos_1501 PF07690 Major Facilitator Superfamily Theos_1502 PF00312 Ribosomal protein S15 Theos_1503 PF00013 KH domain Theos_1503 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Theos_1503 PF01138 3' exoribonuclease family, domain 1 Theos_1503 PF03725 3' exoribonuclease family, domain 2 Theos_1503 PF00575 S1 RNA binding domain Theos_1504 PF12706 Beta-lactamase superfamily domain Theos_1504 PF17770 Ribonuclease J C-terminal domain Theos_1504 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Theos_1506 PF00690 Cation transporter/ATPase, N-terminus Theos_1506 PF00689 Cation transporting ATPase, C-terminus Theos_1507 PF00072 Response regulator receiver domain Theos_1507 PF00486 Transcriptional regulatory protein, C terminal Theos_1508 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theos_1508 PF00989 PAS fold Theos_1508 PF16736 Single Cache-like Theos_1508 PF00512 His Kinase A (phospho-acceptor) domain Theos_1509 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Theos_1509 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Theos_1509 PF02770 Acyl-CoA dehydrogenase, middle domain Theos_1510 PF01012 Electron transfer flavoprotein domain Theos_1511 PF00766 Electron transfer flavoprotein FAD-binding domain Theos_1511 PF01012 Electron transfer flavoprotein domain Theos_1513 PF01039 Carboxyl transferase domain Theos_1514 PF03167 Uracil DNA glycosylase superfamily Theos_1515 PF14791 DNA polymerase beta thumb Theos_1515 PF14716 Helix-hairpin-helix domain Theos_1515 PF02811 PHP domain Theos_1518 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Theos_1518 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Theos_1518 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Theos_1518 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Theos_1518 PF10371 Domain of unknown function Theos_1520 PF02073 Thermophilic metalloprotease (M29) Theos_1523 PF01053 Cys/Met metabolism PLP-dependent enzyme Theos_1524 PF01070 FMN-dependent dehydrogenase Theos_1525 PF00106 short chain dehydrogenase Theos_1526 PF00582 Universal stress protein family Theos_1527 PF01430 Hsp33 protein Theos_1528 PF09190 DALR domain Theos_1528 PF01406 tRNA synthetases class I (C) catalytic domain Theos_1529 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Theos_1529 PF02770 Acyl-CoA dehydrogenase, middle domain Theos_1529 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Theos_1530 PF00108 Thiolase, N-terminal domain Theos_1530 PF02803 Thiolase, C-terminal domain Theos_1531 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Theos_1531 PF00378 Enoyl-CoA hydratase/isomerase Theos_1531 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Theos_1533 PF03109 ABC1 family Theos_1536 PF00501 AMP-binding enzyme Theos_1536 PF13193 AMP-binding enzyme C-terminal domain Theos_1539 PF00107 Zinc-binding dehydrogenase Theos_1539 PF13823 Alcohol dehydrogenase GroES-associated Theos_1539 PF08240 Alcohol dehydrogenase GroES-like domain Theos_1540 PF00268 Ribonucleotide reductase, small chain Theos_1541 PF00171 Aldehyde dehydrogenase family Theos_1542 PF17757 UvrB interaction domain Theos_1542 PF00271 Helicase conserved C-terminal domain Theos_1542 PF00270 DEAD/DEAH box helicase Theos_1542 PF02559 CarD-like/TRCF domain Theos_1542 PF03461 TRCF domain Theos_1543 PF02645 Uncharacterised protein, DegV family COG1307 Theos_1544 PF01470 Pyroglutamyl peptidase Theos_1545 PF00534 Glycosyl transferases group 1 Theos_1545 PF13439 Glycosyltransferase Family 4 Theos_1546 PF03275 UDP-galactopyranose mutase Theos_1548 PF13439 Glycosyltransferase Family 4 Theos_1548 PF00534 Glycosyl transferases group 1 Theos_1549 PF00535 Glycosyl transferase family 2 Theos_1551 PF01522 Polysaccharide deacetylase Theos_1552 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Theos_1552 PF01266 FAD dependent oxidoreductase Theos_1553 PF04474 Protein of unknown function (DUF554) Theos_1554 PF02686 Glu-tRNAGln amidotransferase C subunit Theos_1555 PF02403 Seryl-tRNA synthetase N-terminal domain Theos_1555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Theos_1556 PF13378 Enolase C-terminal domain-like Theos_1556 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Theos_1558 PF01979 Amidohydrolase family Theos_1560 PF02585 GlcNAc-PI de-N-acetylase Theos_1561 PF07736 Chorismate mutase type I Theos_1562 PF00171 Aldehyde dehydrogenase family Theos_1563 PF01619 Proline dehydrogenase Theos_1564 PF07729 FCD domain Theos_1564 PF00392 Bacterial regulatory proteins, gntR family Theos_1568 PF00155 Aminotransferase class I and II Theos_1569 PF07669 Eco57I restriction-modification methylase Theos_1569 PF12950 TaqI-like C-terminal specificity domain Theos_1571 PF01751 Toprim domain Theos_1571 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theos_1571 PF00986 DNA gyrase B subunit, carboxyl terminus Theos_1571 PF00204 DNA gyrase B Theos_1572 PF00271 Helicase conserved C-terminal domain Theos_1572 PF04408 Helicase associated domain (HA2) Theos_1572 PF00270 DEAD/DEAH box helicase Theos_1572 PF08482 ATP-dependent helicase C-terminal Theos_1575 PF13823 Alcohol dehydrogenase GroES-associated Theos_1575 PF00107 Zinc-binding dehydrogenase Theos_1575 PF08240 Alcohol dehydrogenase GroES-like domain Theos_1584 PF00890 FAD binding domain Theos_1586 PF00793 DAHP synthetase I family Theos_1586 PF01817 Chorismate mutase type II Theos_1587 PF00902 Sec-independent protein translocase protein (TatC) Theos_1588 PF02416 mttA/Hcf106 family Theos_1589 PF00132 Bacterial transferase hexapeptide (six repeats) Theos_1589 PF14602 Hexapeptide repeat of succinyl-transferase Theos_1589 PF12804 MobA-like NTP transferase domain Theos_1590 PF01790 Prolipoprotein diacylglyceryl transferase Theos_1593 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Theos_1593 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Theos_1594 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Theos_1594 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Theos_1595 PF02146 Sir2 family Theos_1596 PF03853 YjeF-related protein N-terminus Theos_1596 PF01256 Carbohydrate kinase Theos_1597 PF08544 GHMP kinases C terminal Theos_1597 PF00288 GHMP kinases N terminal domain Theos_1599 PF17070 30S ribosomal protein Thx Theos_1600 PF01649 Ribosomal protein S20 Theos_1602 PF00579 tRNA synthetases class I (W and Y) Theos_1605 PF03918 Cytochrome C biogenesis protein Theos_1606 PF08534 Redoxin Theos_1607 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Theos_1607 PF01578 Cytochrome C assembly protein Theos_1608 PF03100 CcmE Theos_1610 PF01578 Cytochrome C assembly protein Theos_1611 PF03379 CcmB protein Theos_1612 PF00005 ABC transporter Theos_1612 PF13732 Domain of unknown function (DUF4162) Theos_1613 PF02683 Cytochrome C biogenesis protein transmembrane region Theos_1615 PF00174 Oxidoreductase molybdopterin binding domain Theos_1616 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding Theos_1616 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theos_1616 PF10518 TAT (twin-arginine translocation) pathway signal sequence Theos_1621 PF02872 5'-nucleotidase, C-terminal domain Theos_1621 PF00149 Calcineurin-like phosphoesterase Theos_1627 PF00034 Cytochrome c Theos_1628 PF08402 TOBE domain Theos_1628 PF00005 ABC transporter Theos_1632 PF00478 IMP dehydrogenase / GMP reductase domain Theos_1632 PF00571 CBS domain Theos_1633 PF07690 Major Facilitator Superfamily Theos_1634 PF01588 Putative tRNA binding domain Theos_1635 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Theos_1637 PF01380 SIS domain Theos_1640 PF00005 ABC transporter Theos_1640 PF17755 UvrA DNA-binding domain Theos_1640 PF17760 UvrA interaction domain Theos_1641 PF01134 Glucose inhibited division protein A Theos_1642 PF00977 Histidine biosynthesis protein Theos_1643 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Theos_1643 PF01502 Phosphoribosyl-AMP cyclohydrolase Theos_1644 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Theos_1645 PF02867 Ribonucleotide reductase, barrel domain Theos_1645 PF00317 Ribonucleotide reductase, all-alpha domain Theos_1645 PF03477 ATP cone domain Theos_1649 PF00528 Binding-protein-dependent transport system inner membrane component Theos_1650 PF00528 Binding-protein-dependent transport system inner membrane component Theos_1651 PF00814 Glycoprotease family Theos_1654 PF01026 TatD related DNase Theos_1657 PF01336 OB-fold nucleic acid binding domain Theos_1657 PF00152 tRNA synthetases class II (D, K and N) Theos_1658 PF13085 2Fe-2S iron-sulfur cluster binding domain Theos_1659 PF02910 Fumarate reductase flavoprotein C-term Theos_1659 PF00890 FAD binding domain Theos_1661 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Theos_1662 PF02675 S-adenosylmethionine decarboxylase Theos_1664 PF00005 ABC transporter Theos_1667 PF01738 Dienelactone hydrolase family Theos_1667 PF00156 Phosphoribosyl transferase domain Theos_1668 PF13193 AMP-binding enzyme C-terminal domain Theos_1668 PF00501 AMP-binding enzyme Theos_1669 PF00380 Ribosomal protein S9/S16 Theos_1670 PF00572 Ribosomal protein L13 Theos_1671 PF06418 CTP synthase N-terminus Theos_1671 PF00117 Glutamine amidotransferase class-I Theos_1674 PF00310 Glutamine amidotransferases class-II Theos_1674 PF01493 GXGXG motif Theos_1674 PF01645 Conserved region in glutamate synthase Theos_1674 PF04898 Glutamate synthase central domain Theos_1680 PF02223 Thymidylate kinase Theos_1681 PF01784 NIF3 (NGG1p interacting factor 3) Theos_1682 PF00326 Prolyl oligopeptidase family Theos_1682 PF07676 WD40-like Beta Propeller Repeat Theos_1684 PF01171 PP-loop family Theos_1684 PF14437 MafB19-like deaminase Theos_1700 PF00589 Phage integrase family Theos_1700 PF02899 Phage integrase, N-terminal SAM-like domain Theos_1703 PF00180 Isocitrate/isopropylmalate dehydrogenase Theos_1704 PF00773 RNB domain Theos_1706 PF01142 tRNA pseudouridine synthase D (TruD) Theos_1710 PF03061 Thioesterase superfamily Theos_1711 PF02151 UvrB/uvrC motif Theos_1711 PF01541 GIY-YIG catalytic domain Theos_1711 PF08459 UvrC Helix-hairpin-helix N-terminal Theos_1713 PF03485 Arginyl tRNA synthetase N terminal domain Theos_1713 PF05746 DALR anticodon binding domain Theos_1713 PF00750 tRNA synthetases class I (R) Theos_1714 PF17820 PDZ domain Theos_1714 PF13180 PDZ domain Theos_1715 PF01712 Deoxynucleoside kinase Theos_1717 PF01225 Mur ligase family, catalytic domain Theos_1717 PF02875 Mur ligase family, glutamate ligase domain Theos_1717 PF08245 Mur ligase middle domain Theos_1723 PF00535 Glycosyl transferase family 2 Theos_1725 PF00072 Response regulator receiver domain Theos_1725 PF00486 Transcriptional regulatory protein, C terminal Theos_1726 PF16736 Single Cache-like Theos_1726 PF00989 PAS fold Theos_1726 PF00512 His Kinase A (phospho-acceptor) domain Theos_1726 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theos_1729 PF00230 Major intrinsic protein Theos_1730 PF01116 Fructose-bisphosphate aldolase class-II Theos_1731 PF00834 Ribulose-phosphate 3 epimerase family Theos_1732 PF00485 Phosphoribulokinase / Uridine kinase family Theos_1733 PF00004 ATPase family associated with various cellular activities (AAA) Theos_1733 PF17866 AAA lid domain Theos_1734 PF00101 Ribulose bisphosphate carboxylase, small chain Theos_1735 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Theos_1735 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain Theos_1736 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Theos_1737 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Theos_1737 PF03466 LysR substrate binding domain Theos_1742 PF13419 Haloacid dehalogenase-like hydrolase Theos_1743 PF01116 Fructose-bisphosphate aldolase class-II Theos_1744 PF04029 2-phosphosulpholactate phosphatase Theos_1745 PF00456 Transketolase, thiamine diphosphate binding domain Theos_1745 PF02779 Transketolase, pyrimidine binding domain Theos_1745 PF02780 Transketolase, C-terminal domain Theos_1747 PF00271 Helicase conserved C-terminal domain Theos_1747 PF00270 DEAD/DEAH box helicase Theos_1748 PF03454 MoeA C-terminal region (domain IV) Theos_1748 PF03453 MoeA N-terminal region (domain I and II) Theos_1748 PF00994 Probable molybdopterin binding domain Theos_1750 PF00633 Helix-hairpin-helix motif Theos_1750 PF10576 Iron-sulfur binding domain of endonuclease III Theos_1750 PF00730 HhH-GPD superfamily base excision DNA repair protein Theos_1752 PF00005 ABC transporter Theos_1753 PF09180 Prolyl-tRNA synthetase, C-terminal Theos_1753 PF03129 Anticodon binding domain Theos_1753 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Theos_1755 PF00082 Subtilase family Theos_1756 PF01676 Metalloenzyme superfamily Theos_1756 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Theos_1757 PF01368 DHH family Theos_1757 PF02272 DHHA1 domain Theos_1760 PF00293 NUDIX domain Theos_1761 PF12804 MobA-like NTP transferase domain Theos_1761 PF01066 CDP-alcohol phosphatidyltransferase Theos_1762 PF02224 Cytidylate kinase Theos_1763 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Theos_1764 PF00266 Aminotransferase class-V Theos_1765 PF02082 Transcriptional regulator Theos_1766 PF00950 ABC 3 transport family Theos_1767 PF00005 ABC transporter Theos_1768 PF00005 ABC transporter Theos_1770 PF11862 Domain of unknown function (DUF3382) Theos_1770 PF02653 Branched-chain amino acid transport system / permease component Theos_1771 PF02653 Branched-chain amino acid transport system / permease component Theos_1772 PF13193 AMP-binding enzyme C-terminal domain Theos_1772 PF00501 AMP-binding enzyme Theos_1773 PF12399 Branched-chain amino acid ATP-binding cassette transporter Theos_1773 PF00005 ABC transporter Theos_1774 PF00468 Ribosomal protein L34 Theos_1775 PF00825 Ribonuclease P Theos_1776 PF01809 Putative membrane protein insertion efficiency factor Theos_1777 PF02096 60Kd inner membrane protein Theos_1779 PF17827 PrmC N-terminal domain Theos_1779 PF05175 Methyltransferase small domain Theos_1781 PF00005 ABC transporter Theos_1782 PF00749 tRNA synthetases class I (E and Q), catalytic domain Theos_1784 PF02881 SRP54-type protein, helical bundle domain Theos_1784 PF00448 SRP54-type protein, GTPase domain Theos_1785 PF02600 Disulfide bond formation protein DsbB Theos_1787 PF13361 UvrD-like helicase C-terminal domain Theos_1787 PF00580 UvrD/REP helicase N-terminal domain Theos_1789 PF13193 AMP-binding enzyme C-terminal domain Theos_1789 PF00501 AMP-binding enzyme Theos_1790 PF07311 Dodecin Theos_1793 PF00378 Enoyl-CoA hydratase/isomerase Theos_1794 PF01048 Phosphorylase superfamily Theos_1795 PF00005 ABC transporter Theos_1796 PF00027 Cyclic nucleotide-binding domain Theos_1796 PF13545 Crp-like helix-turn-helix domain Theos_1797 PF04029 2-phosphosulpholactate phosphatase Theos_1798 PF01546 Peptidase family M20/M25/M40 Theos_1798 PF07687 Peptidase dimerisation domain Theos_1799 PF13411 MerR HTH family regulatory protein Theos_1800 PF01614 Bacterial transcriptional regulator Theos_1800 PF09339 IclR helix-turn-helix domain Theos_1803 PF01565 FAD binding domain Theos_1803 PF02913 FAD linked oxidases, C-terminal domain Theos_1804 PF01565 FAD binding domain Theos_1805 PF13183 4Fe-4S dicluster domain Theos_1805 PF02754 Cysteine-rich domain Theos_1806 PF05161 MOFRL family Theos_1806 PF13660 Domain of unknown function (DUF4147) Theos_1809 PF04055 Radical SAM superfamily Theos_1811 PF11497 NADH-quinone oxidoreductase chain 15 Theos_1818 PF00291 Pyridoxal-phosphate dependent enzyme Theos_1819 PF00742 Homoserine dehydrogenase Theos_1819 PF01842 ACT domain Theos_1819 PF03447 Homoserine dehydrogenase, NAD binding domain Theos_1820 PF08331 Domain of unknown function (DUF1730) Theos_1822 PF00795 Carbon-nitrogen hydrolase Theos_1824 PF01209 ubiE/COQ5 methyltransferase family Theos_1825 PF01209 ubiE/COQ5 methyltransferase family Theos_1826 PF00128 Alpha amylase, catalytic domain Theos_1828 PF01171 PP-loop family Theos_1829 PF02597 ThiS family Theos_1830 PF00850 Histone deacetylase domain Theos_1831 PF00571 CBS domain Theos_1832 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Theos_1832 PF00005 ABC transporter Theos_1833 PF00005 ABC transporter Theos_1833 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Theos_1834 PF00528 Binding-protein-dependent transport system inner membrane component Theos_1834 PF12911 N-terminal TM domain of oligopeptide transport permease C Theos_1835 PF00528 Binding-protein-dependent transport system inner membrane component Theos_1836 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Theos_1837 PF08240 Alcohol dehydrogenase GroES-like domain Theos_1837 PF00109 Beta-ketoacyl synthase, N-terminal domain Theos_1837 PF02801 Beta-ketoacyl synthase, C-terminal domain Theos_1837 PF00550 Phosphopantetheine attachment site Theos_1837 PF16197 Ketoacyl-synthetase C-terminal extension Theos_1837 PF08659 KR domain Theos_1837 PF00698 Acyl transferase domain Theos_1837 PF14765 Polyketide synthase dehydratase Theos_1838 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theos_1847 PF12849 PBP superfamily domain Theos_1848 PF00528 Binding-protein-dependent transport system inner membrane component Theos_1849 PF00005 ABC transporter Theos_1851 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Theos_1851 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Theos_1852 PF00294 pfkB family carbohydrate kinase Theos_1853 PF08240 Alcohol dehydrogenase GroES-like domain Theos_1853 PF00107 Zinc-binding dehydrogenase Theos_1858 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Theos_1861 PF13603 Leucyl-tRNA synthetase, Domain 2 Theos_1861 PF08264 Anticodon-binding domain of tRNA Theos_1861 PF00133 tRNA synthetases class I (I, L, M and V) Theos_1862 PF00575 S1 RNA binding domain Theos_1865 PF03819 MazG nucleotide pyrophosphohydrolase domain Theos_1866 PF02142 MGS-like domain Theos_1867 PF01425 Amidase Theos_1872 PF00248 Aldo/keto reductase family Theos_1874 PF01804 Penicillin amidase Theos_1875 PF05362 Lon protease (S16) C-terminal proteolytic domain Theos_1875 PF13654 AAA domain Theos_1876 PF00483 Nucleotidyl transferase Theos_1878 PF00072 Response regulator receiver domain Theos_1878 PF00486 Transcriptional regulatory protein, C terminal Theos_1880 PF00534 Glycosyl transferases group 1 Theos_1880 PF08323 Starch synthase catalytic domain Theos_1882 PF01207 Dihydrouridine synthase (Dus) Theos_1883 PF02401 LytB protein Theos_1887 PF00892 EamA-like transporter family Theos_1888 PF04055 Radical SAM superfamily Theos_1888 PF06463 Molybdenum Cofactor Synthesis C Theos_1893 PF00005 ABC transporter Theos_1898 PF02542 YgbB family Theos_1899 PF03458 UPF0126 domain Theos_1900 PF01967 MoaC family Theos_1904 PF01139 tRNA-splicing ligase RtcB Theos_1904 PF01139 tRNA-splicing ligase RtcB Theos_1907 PF01475 Ferric uptake regulator family Theos_1908 PF00883 Cytosol aminopeptidase family, catalytic domain Theos_1908 PF02789 Cytosol aminopeptidase family, N-terminal domain Theos_1909 PF07136 Protein of unknown function (DUF1385) Theos_1911 PF12849 PBP superfamily domain Theos_1912 PF00528 Binding-protein-dependent transport system inner membrane component Theos_1913 PF00528 Binding-protein-dependent transport system inner membrane component Theos_1914 PF00005 ABC transporter Theos_1915 PF07690 Major Facilitator Superfamily Theos_1916 PF02463 RecF/RecN/SMC N terminal domain Theos_1918 PF00877 NlpC/P60 family Theos_1918 PF01476 LysM domain Theos_1919 PF00881 Nitroreductase family Theos_1920 PF06750 Bacterial Peptidase A24 N-terminal domain Theos_1920 PF01478 Type IV leader peptidase family Theos_1921 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Theos_1921 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Theos_1921 PF02770 Acyl-CoA dehydrogenase, middle domain Theos_1922 PF04055 Radical SAM superfamily Theos_1924 PF01134 Glucose inhibited division protein A Theos_1924 PF13932 GidA associated domain Theos_1925 PF14815 NUDIX domain Theos_1925 PF00730 HhH-GPD superfamily base excision DNA repair protein Theos_1925 PF00633 Helix-hairpin-helix motif Theos_1928 PF02540 NAD synthase Theos_1929 PF00795 Carbon-nitrogen hydrolase Theos_1929 PF02540 NAD synthase Theos_1930 PF09210 Domain of unknown function (DUF1957) Theos_1930 PF03065 Glycosyl hydrolase family 57 Theos_1931 PF00696 Amino acid kinase family Theos_1932 PF02774 Semialdehyde dehydrogenase, dimerisation domain Theos_1932 PF01118 Semialdehyde dehydrogenase, NAD binding domain Theos_1933 PF08443 RimK-like ATP-grasp domain Theos_1934 PF08271 TFIIB zinc-binding Theos_1936 PF00694 Aconitase C-terminal domain Theos_1937 PF00330 Aconitase family (aconitate hydratase) Theos_1941 PF01255 Putative undecaprenyl diphosphate synthase Theos_1942 PF02770 Acyl-CoA dehydrogenase, middle domain Theos_1942 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Theos_1942 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Theos_1943 PF02441 Flavoprotein Theos_1944 PF16320 Ribosomal protein L7/L12 dimerisation domain Theos_1944 PF00542 Ribosomal protein L7/L12 C-terminal domain Theos_1945 PF00466 Ribosomal protein L10 Theos_1946 PF00687 Ribosomal protein L1p/L10e family Theos_1947 PF03946 Ribosomal protein L11, N-terminal domain Theos_1947 PF00298 Ribosomal protein L11, RNA binding domain Theos_1948 PF02357 Transcription termination factor nusG Theos_1948 PF00467 KOW motif Theos_1949 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Theos_1950 PF00471 Ribosomal protein L33 Theos_1951 PF03143 Elongation factor Tu C-terminal domain Theos_1951 PF03144 Elongation factor Tu domain 2 Theos_1951 PF00009 Elongation factor Tu GTP binding domain Theos_1956 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Theos_1956 PF10996 Beta-Casp domain Theos_1956 PF00753 Metallo-beta-lactamase superfamily Theos_1957 PF02219 Methylenetetrahydrofolate reductase Theos_1958 PF00857 Isochorismatase family Theos_1959 PF00730 HhH-GPD superfamily base excision DNA repair protein Theos_1961 PF02811 PHP domain Theos_1963 PF00174 Oxidoreductase molybdopterin binding domain Theos_1964 PF02641 Uncharacterized ACR, COG1993 Theos_1965 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Theos_1966 PF00885 6,7-dimethyl-8-ribityllumazine synthase Theos_1970 PF00437 Type II/IV secretion system protein Theos_1970 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Theos_1971 PF00437 Type II/IV secretion system protein Theos_1972 PF02934 GatB/GatE catalytic domain Theos_1972 PF02637 GatB domain Theos_1973 PF02769 AIR synthase related protein, C-terminal domain Theos_1973 PF00586 AIR synthase related protein, N-terminal domain Theos_1974 PF00300 Histidine phosphatase superfamily (branch 1) Theos_1978 PF04012 PspA/IM30 family Theos_1982 PF12170 DNA polymerase III tau subunit V interacting with alpha Theos_1982 PF12169 DNA polymerase III subunits gamma and tau domain III Theos_1983 PF04468 PSP1 C-terminal conserved region Theos_1987 PF01209 ubiE/COQ5 methyltransferase family Theos_1988 PF01451 Low molecular weight phosphotyrosine protein phosphatase Theos_1991 PF00591 Glycosyl transferase family, a/b domain Theos_1991 PF02885 Glycosyl transferase family, helical bundle domain Theos_1992 PF00117 Glutamine amidotransferase class-I Theos_1993 PF04715 Anthranilate synthase component I, N terminal region Theos_1993 PF00425 chorismate binding enzyme Theos_1994 PF00034 Cytochrome c Theos_1998 PF02779 Transketolase, pyrimidine binding domain Theos_1998 PF02780 Transketolase, C-terminal domain Theos_1998 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Theos_2002 PF03129 Anticodon binding domain Theos_2002 PF02824 TGS domain Theos_2002 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Theos_2002 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Theos_2007 PF00781 Diacylglycerol kinase catalytic domain Theos_2008 PF00300 Histidine phosphatase superfamily (branch 1) Theos_2010 PF00850 Histone deacetylase domain Theos_2012 PF00588 SpoU rRNA Methylase family Theos_2013 PF00270 DEAD/DEAH box helicase Theos_2013 PF17191 RecG wedge domain Theos_2013 PF13749 Putative ATP-dependent DNA helicase recG C-terminal Theos_2014 PF00909 Ammonium Transporter Family Theos_2015 PF00543 Nitrogen regulatory protein P-II Theos_2016 PF01628 HrcA protein C terminal domain Theos_2017 PF02391 MoaE protein Theos_2020 PF00842 Alanine racemase, C-terminal domain Theos_2020 PF01168 Alanine racemase, N-terminal domain Theos_2021 PF00271 Helicase conserved C-terminal domain Theos_2021 PF00270 DEAD/DEAH box helicase Theos_2021 PF17764 3′ DNA-binding domain (3′BD) Theos_2021 PF18074 Primosomal protein N C-terminal domain Theos_2021 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Theos_2023 PF01329 Pterin 4 alpha carbinolamine dehydratase Theos_2024 PF03061 Thioesterase superfamily Theos_2026 PF06827 Zinc finger found in FPG and IleRS Theos_2026 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Theos_2026 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Theos_2027 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Theos_2028 PF01138 3' exoribonuclease family, domain 1 Theos_2028 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Theos_2028 PF00013 KH domain Theos_2028 PF00575 S1 RNA binding domain Theos_2028 PF03725 3' exoribonuclease family, domain 2 Theos_2029 PF00085 Thioredoxin Theos_2030 PF02504 Fatty acid synthesis protein Theos_2031 PF01951 Archease protein family (MTH1598/TM1083) Theos_2032 PF02585 GlcNAc-PI de-N-acetylase Theos_2036 PF00171 Aldehyde dehydrogenase family Theos_2037 PF01472 PUA domain Theos_2037 PF00696 Amino acid kinase family Theos_2041 PF01923 Cobalamin adenosyltransferase Theos_2043 PF00005 ABC transporter Theos_2048 PF00202 Aminotransferase class-III Theos_2051 PF01546 Peptidase family M20/M25/M40 Theos_2052 PF05230 MASE2 domain Theos_2052 PF00990 Diguanylate cyclase, GGDEF domain Theos_2054 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theos_2059 PF00037 4Fe-4S binding domain Theos_2059 PF13247 4Fe-4S dicluster domain Theos_2062 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Theos_2063 PF08534 Redoxin Theos_2064 PF09988 Uncharacterized metal-binding protein (DUF2227) Theos_2065 PF03575 Peptidase family S51 Theos_2066 PF00440 Bacterial regulatory proteins, tetR family Theos_2066 PF08359 YsiA-like protein, C-terminal region Theos_2069 PF08544 GHMP kinases C terminal Theos_2069 PF00288 GHMP kinases N terminal domain Theos_2070 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Theos_2071 PF02673 Bacitracin resistance protein BacA Theos_2072 PF00266 Aminotransferase class-V Theos_2073 PF00684 DnaJ central domain Theos_2073 PF01556 DnaJ C terminal domain Theos_2073 PF00226 DnaJ domain Theos_2074 PF00313 'Cold-shock' DNA-binding domain Theos_2076 PF00037 4Fe-4S binding domain Theos_2083 PF10410 DnaB-helicase binding domain of primase Theos_2083 PF08275 DNA primase catalytic core, N-terminal domain Theos_2083 PF01807 CHC2 zinc finger Theos_2087 PF12728 Helix-turn-helix domain Theos_2089 PF02899 Phage integrase, N-terminal SAM-like domain Theos_2089 PF00589 Phage integrase family Theos_2091 PF03099 Biotin/lipoate A/B protein ligase family Theos_2092 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Theos_2092 PF04055 Radical SAM superfamily Theos_2094 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Theos_2094 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Theos_2095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Theos_2095 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theos_2096 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Theos_2096 PF02817 e3 binding domain Theos_2096 PF00364 Biotin-requiring enzyme Theos_2098 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Theos_2099 PF02780 Transketolase, C-terminal domain Theos_2099 PF02779 Transketolase, pyrimidine binding domain Theos_2100 PF00676 Dehydrogenase E1 component Theos_2101 PF02590 Predicted SPOUT methyltransferase Theos_2104 PF02237 Biotin protein ligase C terminal domain Theos_2104 PF03099 Biotin/lipoate A/B protein ligase family Theos_2105 PF00483 Nucleotidyl transferase Theos_2106 PF01209 ubiE/COQ5 methyltransferase family Theos_2108 PF00709 Adenylosuccinate synthetase Theos_2109 PF00248 Aldo/keto reductase family Theos_2110 PF02592 Putative vitamin uptake transporter Theos_2112 PF01479 S4 domain Theos_2112 PF00849 RNA pseudouridylate synthase Theos_2113 PF00378 Enoyl-CoA hydratase/isomerase Theos_2114 PF01509 TruB family pseudouridylate synthase (N terminal domain) Theos_2115 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Theos_2115 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Theos_2116 PF03780 Asp23 family, cell envelope-related function Theos_2117 PF13684 Dihydroxyacetone kinase family Theos_2117 PF02734 DAK2 domain Theos_2120 PF12704 MacB-like periplasmic core domain Theos_2120 PF02687 FtsX-like permease family Theos_2121 PF01281 Ribosomal protein L9, N-terminal domain Theos_2121 PF03948 Ribosomal protein L9, C-terminal domain Theos_2122 PF01084 Ribosomal protein S18 Theos_2123 PF00436 Single-strand binding protein family Theos_2124 PF01250 Ribosomal protein S6 Theos_2126 PF02233 NAD(P) transhydrogenase beta subunit Theos_2127 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Theos_2128 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Theos_2128 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Theos_2132 PF13335 Magnesium chelatase, subunit ChlI C-terminal Theos_2132 PF01078 Magnesium chelatase, subunit ChlI Theos_2133 PF01568 Molydopterin dinucleotide binding domain Theos_2133 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Theos_2133 PF00384 Molybdopterin oxidoreductase Theos_2134 PF00135 Carboxylesterase family Theos_2135 PF01351 Ribonuclease HII Theos_2137 PF03480 Bacterial extracellular solute-binding protein, family 7 Theos_2138 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Theos_2140 PF07690 Major Facilitator Superfamily Theos_2142 PF00809 Pterin binding enzyme Theos_2143 PF02152 Dihydroneopterin aldolase Theos_2146 PF00528 Binding-protein-dependent transport system inner membrane component Theos_2147 PF00232 Glycosyl hydrolase family 1 Theos_2151 PF04055 Radical SAM superfamily Theos_2151 PF13186 Iron-sulfur cluster-binding domain Theos_2156 PF00334 Nucleoside diphosphate kinase Theos_2158 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Theos_2158 PF03466 LysR substrate binding domain Theos_2159 PF17831 Pyruvate dehydrogenase E1 component middle domain Theos_2159 PF00456 Transketolase, thiamine diphosphate binding domain Theos_2160 PF02817 e3 binding domain Theos_2160 PF00364 Biotin-requiring enzyme Theos_2160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Theos_2161 PF01547 Bacterial extracellular solute-binding protein Theos_2162 PF00528 Binding-protein-dependent transport system inner membrane component Theos_2163 PF00528 Binding-protein-dependent transport system inner membrane component Theos_2164 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Theos_2164 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Theos_2164 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Theos_2164 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Theos_2167 PF07690 Major Facilitator Superfamily Theos_2169 PF01380 SIS domain Theos_2169 PF00571 CBS domain Theos_2170 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV Theos_2171 PF00440 Bacterial regulatory proteins, tetR family Theos_2172 PF00005 ABC transporter Theos_2176 PF00291 Pyridoxal-phosphate dependent enzyme Theos_2177 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Theos_2178 PF00313 'Cold-shock' DNA-binding domain Theos_2179 PF01975 Survival protein SurE Theos_2183 PF00994 Probable molybdopterin binding domain Theos_2184 PF00155 Aminotransferase class I and II Theos_2185 PF02875 Mur ligase family, glutamate ligase domain Theos_2185 PF08245 Mur ligase middle domain Theos_2186 PF01475 Ferric uptake regulator family Theos_2187 PF03900 Porphobilinogen deaminase, C-terminal domain Theos_2187 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Theos_2188 PF02811 PHP domain Theos_2188 PF07733 Bacterial DNA polymerase III alpha NTPase domain Theos_2188 PF14579 Helix-hairpin-helix motif Theos_2188 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Theos_2192 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Theos_2192 PF01409 tRNA synthetases class II core domain (F) Theos_2193 PF01588 Putative tRNA binding domain Theos_2193 PF03147 Ferredoxin-fold anticodon binding domain Theos_2193 PF03484 tRNA synthetase B5 domain Theos_2193 PF03483 B3/4 domain Theos_2193 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Theos_2195 PF00365 Phosphofructokinase Theos_2196 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Theos_2198 PF00719 Inorganic pyrophosphatase Theos_2202 PF03772 Competence protein Theos_2202 PF13567 Domain of unknown function (DUF4131) Theos_2202 PF00753 Metallo-beta-lactamase superfamily Theos_2203 PF02195 ParB-like nuclease domain Theos_2203 PF17762 HTH domain found in ParB protein Theos_2204 PF13614 AAA domain Theos_2205 PF02527 rRNA small subunit methyltransferase G Theos_2206 PF01134 Glucose inhibited division protein A Theos_2206 PF13932 GidA associated domain Theos_2209 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Theos_2210 PF03401 Tripartite tricarboxylate transporter family receptor Theos_2212 PF01970 Tripartite tricarboxylate transporter TctA family Theos_2213 PF08240 Alcohol dehydrogenase GroES-like domain Theos_2213 PF00107 Zinc-binding dehydrogenase Theos_2218 PF00005 ABC transporter Theos_2219 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Theos_2219 PF00355 Rieske [2Fe-2S] domain Theos_2220 PF00866 Ring hydroxylating beta subunit Theos_2222 PF01494 FAD binding domain Theos_2226 PF03737 Aldolase/RraA Theos_2227 PF02585 GlcNAc-PI de-N-acetylase Theos_2229 PF00392 Bacterial regulatory proteins, gntR family Theos_2229 PF07729 FCD domain Theos_2230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Theos_2231 PF00171 Aldehyde dehydrogenase family Theos_2233 PF02653 Branched-chain amino acid transport system / permease component Theos_2234 PF12399 Branched-chain amino acid ATP-binding cassette transporter Theos_2234 PF00005 ABC transporter Theos_2235 PF00005 ABC transporter Theos_2257 PF13358 DDE superfamily endonuclease Theos_2265 PF02899 Phage integrase, N-terminal SAM-like domain Theos_2265 PF00589 Phage integrase family Theos_2267 PF13361 UvrD-like helicase C-terminal domain Theos_2267 PF00580 UvrD/REP helicase N-terminal domain Theos_2270 PF05496 Holliday junction DNA helicase RuvB P-loop domain Theos_2270 PF17864 RuvB AAA lid domain Theos_2270 PF05491 RuvB C-terminal winged helix domain Theos_2277 PF09382 RQC domain Theos_2277 PF00270 DEAD/DEAH box helicase Theos_2277 PF16124 RecQ zinc-binding Theos_2277 PF00271 Helicase conserved C-terminal domain Theos_2277 PF00570 HRDC domain Theos_2285 PF00232 Glycosyl hydrolase family 1 Theos_2286 PF00528 Binding-protein-dependent transport system inner membrane component Theos_2287 PF00528 Binding-protein-dependent transport system inner membrane component Theos_2289 PF00356 Bacterial regulatory proteins, lacI family Theos_2290 PF08543 Phosphomethylpyrimidine kinase Theos_2290 PF02581 Thiamine monophosphate synthase Theos_2291 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Theos_2292 PF07690 Major Facilitator Superfamily Theos_2293 PF01964 Radical SAM ThiC family Theos_2295 PF05690 Thiazole biosynthesis protein ThiG Theos_2296 PF02597 ThiS family Theos_2297 PF02581 Thiamine monophosphate synthase Theos_2298 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Theos_2298 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Theos_2299 PF02602 Uroporphyrinogen-III synthase HemD Theos_2300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Theos_2300 PF10414 Sirohaem synthase dimerisation region Theos_2300 PF14824 Sirohaem biosynthesis protein central Theos_2301 PF01507 Phosphoadenosine phosphosulfate reductase family Theos_2302 PF01925 Sulfite exporter TauE/SafE Theos_2303 PF10414 Sirohaem synthase dimerisation region Theos_2303 PF14824 Sirohaem biosynthesis protein central Theos_2303 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Theos_2304 PF14306 PUA-like domain Theos_2304 PF01747 ATP-sulfurylase Theos_2305 PF00296 Luciferase-like monooxygenase Theos_2306 PF07685 CobB/CobQ-like glutamine amidotransferase domain Theos_2306 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Theos_2310 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Theos_2311 PF02654 Cobalamin-5-phosphate synthase Theos_2312 PF01906 Putative heavy-metal-binding Theos_2313 PF02277 Phosphoribosyltransferase Theos_2314 PF00300 Histidine phosphatase superfamily (branch 1) Theos_2315 PF03824 High-affinity nickel-transport protein Theos_2316 PF01888 CbiD Theos_2317 PF02570 Precorrin-8X methylmutase Theos_2318 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Theos_2319 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Theos_2320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Theos_2321 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Theos_2321 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Theos_2322 PF11761 Cobalamin biosynthesis central region Theos_2322 PF01890 Cobalamin synthesis G C-terminus Theos_2322 PF11760 Cobalamin synthesis G N-terminal Theos_2325 PF10414 Sirohaem synthase dimerisation region Theos_2325 PF14824 Sirohaem biosynthesis protein central Theos_2325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Theos_2326 PF03186 CobD/Cbib protein Theos_2329 PF00155 Aminotransferase class I and II Theos_2331 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Theos_2331 PF07685 CobB/CobQ-like glutamine amidotransferase domain Theos_2333 PF00005 ABC transporter Theos_2341 PF00245 Alkaline phosphatase Theos_2342 PF00535 Glycosyl transferase family 2 Theos_2343 PF01975 Survival protein SurE Theos_2345 PF13416 Bacterial extracellular solute-binding protein Theos_2346 PF00528 Binding-protein-dependent transport system inner membrane component Theos_2347 PF00528 Binding-protein-dependent transport system inner membrane component Theos_2349 PF03061 Thioesterase superfamily Theos_2351 PF02867 Ribonucleotide reductase, barrel domain Theos_2351 PF00317 Ribonucleotide reductase, all-alpha domain Theos_2351 PF08343 Ribonucleotide reductase N-terminal Theos_2358 PF01497 Periplasmic binding protein Theos_2360 PF00005 ABC transporter Theos_2361 PF01032 FecCD transport family Theos_2362 PF01497 Periplasmic binding protein Theos_2365 PF00672 HAMP domain Theos_2365 PF00512 His Kinase A (phospho-acceptor) domain Theos_2365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theos_2366 PF00486 Transcriptional regulatory protein, C terminal Theos_2366 PF00072 Response regulator receiver domain Theos_2372 PF04542 Sigma-70 region 2 Theos_2372 PF04545 Sigma-70, region 4 Theos_2379 PF01297 Zinc-uptake complex component A periplasmic Theos_2381 PF02503 Polyphosphate kinase middle domain Theos_2381 PF13090 Polyphosphate kinase C-terminal domain 2 Theos_2381 PF17941 Polyphosphate kinase C-terminal domain 1 Theos_2381 PF13089 Polyphosphate kinase N-terminal domain Theos_2382 PF02541 Ppx/GppA phosphatase family Theos_2386 PF00300 Histidine phosphatase superfamily (branch 1) Theos_2390 PF01547 Bacterial extracellular solute-binding protein Theos_2391 PF00528 Binding-protein-dependent transport system inner membrane component Theos_2392 PF00528 Binding-protein-dependent transport system inner membrane component Theos_2393 PF13277 YmdB-like protein Theos_2396 PF00005 ABC transporter Theos_2396 PF03459 TOBE domain Theos_2399 PF01081 KDPG and KHG aldolase Theos_2400 PF09339 IclR helix-turn-helix domain Theos_2400 PF01614 Bacterial transcriptional regulator Theos_2403 PF00294 pfkB family carbohydrate kinase Theos_2404 PF02615 Malate/L-lactate dehydrogenase Theos_2406 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Theos_2408 PF03480 Bacterial extracellular solute-binding protein, family 7 Theos_2411 PF07690 Major Facilitator Superfamily Theos_2412 PF13614 AAA domain Theos_2413 PF02195 ParB-like nuclease domain Theos_2414 PF00271 Helicase conserved C-terminal domain Theos_2414 PF00176 SNF2 family N-terminal domain Theos_2426 PF08447 PAS fold Theos_2426 PF00563 EAL domain Theos_2426 PF00990 Diguanylate cyclase, GGDEF domain Theos_2426 PF08448 PAS fold Theos_2428 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Theos_2429 PF00528 Binding-protein-dependent transport system inner membrane component Theos_2431 PF07722 Peptidase C26 Theos_2432 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Theos_2432 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Theos_2433 PF01979 Amidohydrolase family Theos_2434 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Theos_2434 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Theos_2435 PF02056 Family 4 glycosyl hydrolase Theos_2435 PF11975 Family 4 glycosyl hydrolase C-terminal domain Theos_2439 PF00873 AcrB/AcrD/AcrF family Theos_2440 PF09084 NMT1/THI5 like Theos_2441 PF00528 Binding-protein-dependent transport system inner membrane component Theos_2442 PF00005 ABC transporter Theos_2443 PF04199 Putative cyclase Theos_2446 PF00528 Binding-protein-dependent transport system inner membrane component Theos_2447 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Theos_2448 PF01546 Peptidase family M20/M25/M40 Theos_2448 PF07687 Peptidase dimerisation domain Theos_2450 PF00171 Aldehyde dehydrogenase family Theos_2455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Theos_2455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Theos_2455 PF02770 Acyl-CoA dehydrogenase, middle domain Theos_2456 PF07739 TipAS antibiotic-recognition domain Theos_2456 PF13411 MerR HTH family regulatory protein Theos_2457 PF00501 AMP-binding enzyme Theos_2457 PF14535 AMP-binding enzyme C-terminal domain Theos_2459 PF13458 Periplasmic binding protein Theos_2460 PF02653 Branched-chain amino acid transport system / permease component Theos_2462 PF00005 ABC transporter Theos_2462 PF12399 Branched-chain amino acid ATP-binding cassette transporter Theos_2463 PF00005 ABC transporter Theos_2464 PF13416 Bacterial extracellular solute-binding protein Theos_2466 PF00528 Binding-protein-dependent transport system inner membrane component Theos_2467 PF07690 Major Facilitator Superfamily Theos_2469 PF01557 Fumarylacetoacetate (FAA) hydrolase family Theos_2470 PF00171 Aldehyde dehydrogenase family Theos_2471 PF01557 Fumarylacetoacetate (FAA) hydrolase family Theos_2472 PF01361 Tautomerase enzyme Theos_2473 PF00682 HMGL-like Theos_2473 PF07836 DmpG-like communication domain Theos_2474 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation Theos_2474 PF01118 Semialdehyde dehydrogenase, NAD binding domain Theos_2475 PF09339 IclR helix-turn-helix domain Theos_2475 PF01614 Bacterial transcriptional regulator Theos_2477 PF00565 Staphylococcal nuclease homologue Theos_2498 PF00436 Single-strand binding protein family Theos_2545 PF00082 Subtilase family Theos_2546 PF00589 Phage integrase family Theos_2546 PF02899 Phage integrase, N-terminal SAM-like domain Theos_2547 PF13614 AAA domain Theos_2548 PF02195 ParB-like nuclease domain Theos_2549 PF12950 TaqI-like C-terminal specificity domain Theos_2549 PF07669 Eco57I restriction-modification methylase Theos_2551 PF00176 SNF2 family N-terminal domain Theos_2551 PF00271 Helicase conserved C-terminal domain Theos_2551 PF00176 SNF2 family N-terminal domain Theos_2551 PF00271 Helicase conserved C-terminal domain