Theos_0003	PWY-1042	glycolysis IV (plant cytosol)
Theos_0003	PWY-1622	formaldehyde assimilation I (serine pathway)
Theos_0003	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Theos_0003	PWY-5484	glycolysis II (from fructose 6-phosphate)
Theos_0003	PWY-5723	Rubisco shunt
Theos_0003	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Theos_0003	PWY-6886	1-butanol autotrophic biosynthesis
Theos_0003	PWY-6901	superpathway of glucose and xylose degradation
Theos_0003	PWY-7003	glycerol degradation to butanol
Theos_0003	PWY-7124	ethylene biosynthesis V (engineered)
Theos_0003	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Theos_0004	PWY-1042	glycolysis IV (plant cytosol)
Theos_0004	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Theos_0004	PWY-5484	glycolysis II (from fructose 6-phosphate)
Theos_0004	PWY-5723	Rubisco shunt
Theos_0004	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Theos_0004	PWY-6886	1-butanol autotrophic biosynthesis
Theos_0004	PWY-6901	superpathway of glucose and xylose degradation
Theos_0004	PWY-7003	glycerol degradation to butanol
Theos_0004	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Theos_0004	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Theos_0006	PWY-5686	UMP biosynthesis
Theos_0006	PWY-7790	Theos_0006
Theos_0006	PWY-7791	Theos_0006
Theos_0007	PWY-5686	UMP biosynthesis
Theos_0007	PWY-7790	Theos_0007
Theos_0007	PWY-7791	Theos_0007
Theos_0009	PWY-5667	CDP-diacylglycerol biosynthesis I
Theos_0009	PWY-5981	CDP-diacylglycerol biosynthesis III
Theos_0009	PWY-7902	Theos_0009
Theos_0011	PWY-5392	reductive TCA cycle II
Theos_0011	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Theos_0016	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Theos_0016	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Theos_0030	PWY-5392	reductive TCA cycle II
Theos_0030	PWY-5537	pyruvate fermentation to acetate V
Theos_0030	PWY-5538	pyruvate fermentation to acetate VI
Theos_0030	PWY-5690	TCA cycle II (plants and fungi)
Theos_0030	PWY-5913	TCA cycle VI (obligate autotrophs)
Theos_0030	PWY-6728	methylaspartate cycle
Theos_0030	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Theos_0030	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Theos_0032	PWY-3801	sucrose degradation II (sucrose synthase)
Theos_0032	PWY-5054	sorbitol biosynthesis I
Theos_0032	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Theos_0032	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Theos_0032	PWY-5659	GDP-mannose biosynthesis
Theos_0032	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Theos_0032	PWY-621	sucrose degradation III (sucrose invertase)
Theos_0032	PWY-622	starch biosynthesis
Theos_0032	PWY-6981	chitin biosynthesis
Theos_0032	PWY-6992	1,5-anhydrofructose degradation
Theos_0032	PWY-7238	sucrose biosynthesis II
Theos_0032	PWY-7347	sucrose biosynthesis III
Theos_0032	PWY-7385	1,3-propanediol biosynthesis (engineered)
Theos_0033	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Theos_0033	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Theos_0036	PWY-3781	aerobic respiration I (cytochrome c)
Theos_0036	PWY-4521	arsenite oxidation I (respiratory)
Theos_0036	PWY-6692	Fe(II) oxidation
Theos_0036	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Theos_0052	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Theos_0052	PWY-6174	mevalonate pathway II (archaea)
Theos_0052	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Theos_0052	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Theos_0052	PWY-7102	bisabolene biosynthesis
Theos_0052	PWY-7391	isoprene biosynthesis II (engineered)
Theos_0052	PWY-7524	mevalonate pathway III (archaea)
Theos_0052	PWY-7560	methylerythritol phosphate pathway II
Theos_0052	PWY-922	mevalonate pathway I
Theos_0086	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Theos_0115	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Theos_0125	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Theos_0125	PWY-5686	UMP biosynthesis
Theos_0125	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Theos_0125	PWY-7790	Theos_0125
Theos_0125	PWY-7791	Theos_0125
Theos_0129	PWY-4983	L-citrulline-nitric oxide cycle
Theos_0129	PWY-4984	urea cycle
Theos_0129	PWY-5	canavanine biosynthesis
Theos_0129	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Theos_0129	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Theos_0130	PWY-4983	L-citrulline-nitric oxide cycle
Theos_0130	PWY-4984	urea cycle
Theos_0130	PWY-5	canavanine biosynthesis
Theos_0130	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Theos_0130	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Theos_0131	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Theos_0131	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Theos_0132	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Theos_0133	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Theos_0152	PWY-5663	tetrahydrobiopterin biosynthesis I
Theos_0152	PWY-5664	tetrahydrobiopterin biosynthesis II
Theos_0152	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Theos_0152	PWY-6703	preQ<sub>0</sub> biosynthesis
Theos_0152	PWY-6983	tetrahydrobiopterin biosynthesis III
Theos_0152	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Theos_0152	PWY-7852	Theos_0152
Theos_0160	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Theos_0160	PWY-6549	L-glutamine biosynthesis III
Theos_0160	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Theos_0160	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Theos_0161	PWY-5674	nitrate reduction IV (dissimilatory)
Theos_0171	PWY-6749	CMP-legionaminate biosynthesis I
Theos_0183	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Theos_0183	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Theos_0183	PWY-5989	stearate biosynthesis II (bacteria and plants)
Theos_0183	PWY-5994	palmitate biosynthesis I (animals and fungi)
Theos_0183	PWY-6113	superpathway of mycolate biosynthesis
Theos_0183	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Theos_0183	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Theos_0183	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Theos_0183	PWY-7663	gondoate biosynthesis (anaerobic)
Theos_0183	PWY-7664	oleate biosynthesis IV (anaerobic)
Theos_0183	PWY-7858	Theos_0183
Theos_0183	PWYG-321	mycolate biosynthesis
Theos_0197	PWY-7884	Theos_0197
Theos_0202	PWY-6700	queuosine biosynthesis
Theos_0206	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Theos_0206	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Theos_0206	PWY-5989	stearate biosynthesis II (bacteria and plants)
Theos_0206	PWY-6113	superpathway of mycolate biosynthesis
Theos_0206	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Theos_0206	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Theos_0206	PWY-7663	gondoate biosynthesis (anaerobic)
Theos_0206	PWY-7664	oleate biosynthesis IV (anaerobic)
Theos_0206	PWY-7858	Theos_0206
Theos_0206	PWYG-321	mycolate biosynthesis
Theos_0211	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Theos_0225	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Theos_0225	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Theos_0225	PWY-7953	Theos_0225
Theos_0241	PWY-5057	L-valine degradation II
Theos_0241	PWY-5076	L-leucine degradation III
Theos_0241	PWY-5078	L-isoleucine degradation II
Theos_0241	PWY-5101	L-isoleucine biosynthesis II
Theos_0241	PWY-5103	L-isoleucine biosynthesis III
Theos_0241	PWY-5104	L-isoleucine biosynthesis IV
Theos_0241	PWY-5108	L-isoleucine biosynthesis V
Theos_0241	PWY-7767	Theos_0241
Theos_0248	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Theos_0248	PWY-2161	folate polyglutamylation
Theos_0248	PWY-2201	folate transformations I
Theos_0248	PWY-3841	folate transformations II
Theos_0257	PWY-5381	pyridine nucleotide cycling (plants)
Theos_0257	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Theos_0257	PWY-7761	Theos_0257
Theos_0264	PWY-1042	glycolysis IV (plant cytosol)
Theos_0264	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Theos_0264	PWY-5484	glycolysis II (from fructose 6-phosphate)
Theos_0264	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Theos_0264	PWY-7385	1,3-propanediol biosynthesis (engineered)
Theos_0266	PWY-7181	pyrimidine deoxyribonucleosides degradation
Theos_0269	PWY-4381	fatty acid biosynthesis initiation I
Theos_0269	PWY-5743	3-hydroxypropanoate cycle
Theos_0269	PWY-5744	glyoxylate assimilation
Theos_0269	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Theos_0269	PWY-6722	candicidin biosynthesis
Theos_0270	PWY-4381	fatty acid biosynthesis initiation I
Theos_0270	PWY-5743	3-hydroxypropanoate cycle
Theos_0270	PWY-5744	glyoxylate assimilation
Theos_0270	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Theos_0270	PWY-6722	candicidin biosynthesis
Theos_0298	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Theos_0299	PWY-7799	Theos_0299
Theos_0299	PWY-7800	Theos_0299
Theos_0322	PWY-6123	inosine-5'-phosphate biosynthesis I
Theos_0322	PWY-6124	inosine-5'-phosphate biosynthesis II
Theos_0322	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Theos_0322	PWY-7234	inosine-5'-phosphate biosynthesis III
Theos_0325	PWY-6123	inosine-5'-phosphate biosynthesis I
Theos_0325	PWY-6124	inosine-5'-phosphate biosynthesis II
Theos_0325	PWY-7234	inosine-5'-phosphate biosynthesis III
Theos_0326	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Theos_0326	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Theos_0326	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Theos_0327	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Theos_0327	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Theos_0327	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Theos_0329	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Theos_0329	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Theos_0329	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Theos_0330	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Theos_0330	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Theos_0330	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Theos_0330	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Theos_0332	PWY-1622	formaldehyde assimilation I (serine pathway)
Theos_0332	PWY-181	photorespiration
Theos_0332	PWY-2161	folate polyglutamylation
Theos_0332	PWY-2201	folate transformations I
Theos_0332	PWY-3661	glycine betaine degradation I
Theos_0332	PWY-3661-1	glycine betaine degradation II (mammalian)
Theos_0332	PWY-3841	folate transformations II
Theos_0332	PWY-5497	purine nucleobases degradation II (anaerobic)
Theos_0346	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Theos_0346	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Theos_0365	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Theos_0365	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Theos_0365	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Theos_0365	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Theos_0365	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Theos_0365	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Theos_0365	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Theos_0365	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Theos_0371	PWY-5484	glycolysis II (from fructose 6-phosphate)
Theos_0371	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Theos_0380	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Theos_0381	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Theos_0381	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Theos_0387	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Theos_0387	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Theos_0388	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Theos_0388	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Theos_0392	PWY-40	putrescine biosynthesis I
Theos_0392	PWY-43	putrescine biosynthesis II
Theos_0392	PWY-6305	putrescine biosynthesis IV
Theos_0392	PWY-6834	spermidine biosynthesis III
Theos_0410	PWY-5350	thiosulfate disproportionation III (rhodanese)
Theos_0410	PWY-7927	Theos_0410
Theos_0425	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Theos_0425	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Theos_0425	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Theos_0425	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Theos_0425	PWY-6978	plastoquinol-9 biosynthesis II
Theos_0430	PWY-6012	acyl carrier protein metabolism I
Theos_0430	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Theos_0430	PWY-6289	petrobactin biosynthesis
Theos_0432	PWY-6164	3-dehydroquinate biosynthesis I
Theos_0433	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Theos_0434	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Theos_0447	PWY-3961	phosphopantothenate biosynthesis II
Theos_0461	PWY-6749	CMP-legionaminate biosynthesis I
Theos_0468	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Theos_0468	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Theos_0468	PWY-7622	UDP-galactofuranose biosynthesis
Theos_0490	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Theos_0490	PWY-6416	quinate degradation II
Theos_0490	PWY-6707	gallate biosynthesis
Theos_0499	PWY-3801	sucrose degradation II (sucrose synthase)
Theos_0499	PWY-3861	mannitol degradation II
Theos_0499	PWY-3881	mannitol biosynthesis
Theos_0499	PWY-5054	sorbitol biosynthesis I
Theos_0499	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Theos_0499	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Theos_0499	PWY-5659	GDP-mannose biosynthesis
Theos_0499	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Theos_0499	PWY-621	sucrose degradation III (sucrose invertase)
Theos_0499	PWY-622	starch biosynthesis
Theos_0499	PWY-6981	chitin biosynthesis
Theos_0499	PWY-6992	1,5-anhydrofructose degradation
Theos_0499	PWY-7238	sucrose biosynthesis II
Theos_0499	PWY-7347	sucrose biosynthesis III
Theos_0499	PWY-7385	1,3-propanediol biosynthesis (engineered)
Theos_0499	PWY-7456	mannan degradation
Theos_0499	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
Theos_0499	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Theos_0505	PWY-2161	folate polyglutamylation
Theos_0515	PWY-381	nitrate reduction II (assimilatory)
Theos_0515	PWY-5675	nitrate reduction V (assimilatory)
Theos_0515	PWY-6549	L-glutamine biosynthesis III
Theos_0515	PWY-6963	ammonia assimilation cycle I
Theos_0515	PWY-6964	ammonia assimilation cycle II
Theos_0523	PWY-2201	folate transformations I
Theos_0523	PWY-5497	purine nucleobases degradation II (anaerobic)
Theos_0523	PWY-7909	Theos_0523
Theos_0531	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Theos_0531	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Theos_0531	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Theos_0532	PWY-7183	pyrimidine nucleobases salvage I
Theos_0549	PWY-5686	UMP biosynthesis
Theos_0551	PWY-5686	UMP biosynthesis
Theos_0551	PWY-7790	Theos_0551
Theos_0551	PWY-7791	Theos_0551
Theos_0554	PWY-5686	UMP biosynthesis
Theos_0554	PWY-7790	Theos_0554
Theos_0554	PWY-7791	Theos_0554
Theos_0555	PWY-7183	pyrimidine nucleobases salvage I
Theos_0575	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Theos_0576	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Theos_0576	PWY-6164	3-dehydroquinate biosynthesis I
Theos_0576	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
Theos_0579	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Theos_0579	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Theos_0580	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Theos_0580	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Theos_0587	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Theos_0587	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Theos_0588	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Theos_0588	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Theos_0588	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Theos_0601	PWY-6834	spermidine biosynthesis III
Theos_0606	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Theos_0616	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Theos_0619	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Theos_0619	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Theos_0639	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Theos_0641	PWY-7851	Theos_0641
Theos_0644	PWY-4381	fatty acid biosynthesis initiation I
Theos_0644	PWY-5743	3-hydroxypropanoate cycle
Theos_0644	PWY-5744	glyoxylate assimilation
Theos_0644	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Theos_0644	PWY-6722	candicidin biosynthesis
Theos_0652	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Theos_0653	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Theos_0653	PWY-6153	autoinducer AI-2 biosynthesis I
Theos_0653	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Theos_0654	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Theos_0654	PWY-6153	autoinducer AI-2 biosynthesis I
Theos_0654	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Theos_0657	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
Theos_0658	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Theos_0658	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Theos_0658	PWY-7953	Theos_0658
Theos_0663	PWY-6654	phosphopantothenate biosynthesis III
Theos_0671	PWY-5367	petroselinate biosynthesis
Theos_0671	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Theos_0671	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Theos_0671	PWY-5989	stearate biosynthesis II (bacteria and plants)
Theos_0671	PWY-5994	palmitate biosynthesis I (animals and fungi)
Theos_0671	PWY-6113	superpathway of mycolate biosynthesis
Theos_0671	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Theos_0671	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Theos_0671	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Theos_0671	PWY-7663	gondoate biosynthesis (anaerobic)
Theos_0671	PWY-7664	oleate biosynthesis IV (anaerobic)
Theos_0671	PWY-7858	Theos_0671
Theos_0671	PWYG-321	mycolate biosynthesis
Theos_0672	PWY-4381	fatty acid biosynthesis initiation I
Theos_0672	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Theos_0672	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Theos_0673	PWY-4381	fatty acid biosynthesis initiation I
Theos_0676	PWY-31	canavanine degradation
Theos_0676	PWY-4984	urea cycle
Theos_0676	PWY-6305	putrescine biosynthesis IV
Theos_0676	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Theos_0727	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Theos_0727	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Theos_0727	PWY-6896	thiamin salvage I
Theos_0727	PWY-6897	thiamin salvage II
Theos_0735	PWY-6123	inosine-5'-phosphate biosynthesis I
Theos_0735	PWY-7234	inosine-5'-phosphate biosynthesis III
Theos_0755	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Theos_0755	PWY-6167	flavin biosynthesis II (archaea)
Theos_0755	PWY-6168	flavin biosynthesis III (fungi)
Theos_0755	PWY-7863	Theos_0755
Theos_0762	PWY-2941	L-lysine biosynthesis II
Theos_0762	PWY-2942	L-lysine biosynthesis III
Theos_0762	PWY-5097	L-lysine biosynthesis VI
Theos_0762	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Theos_0762	PWY-6559	spermidine biosynthesis II
Theos_0762	PWY-6562	norspermidine biosynthesis
Theos_0762	PWY-7153	grixazone biosynthesis
Theos_0762	PWY-7977	Theos_0762
Theos_0764	PWY-1622	formaldehyde assimilation I (serine pathway)
Theos_0764	PWY-5392	reductive TCA cycle II
Theos_0764	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Theos_0764	PWY-5690	TCA cycle II (plants and fungi)
Theos_0764	PWY-5913	TCA cycle VI (obligate autotrophs)
Theos_0764	PWY-6728	methylaspartate cycle
Theos_0764	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Theos_0764	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Theos_0764	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Theos_0765	PWY-5392	reductive TCA cycle II
Theos_0765	PWY-5537	pyruvate fermentation to acetate V
Theos_0765	PWY-5538	pyruvate fermentation to acetate VI
Theos_0765	PWY-5690	TCA cycle II (plants and fungi)
Theos_0765	PWY-5913	TCA cycle VI (obligate autotrophs)
Theos_0765	PWY-6728	methylaspartate cycle
Theos_0765	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Theos_0765	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Theos_0766	PWY-5392	reductive TCA cycle II
Theos_0766	PWY-5537	pyruvate fermentation to acetate V
Theos_0766	PWY-5538	pyruvate fermentation to acetate VI
Theos_0766	PWY-5690	TCA cycle II (plants and fungi)
Theos_0766	PWY-5913	TCA cycle VI (obligate autotrophs)
Theos_0766	PWY-6728	methylaspartate cycle
Theos_0766	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Theos_0766	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Theos_0771	PWY-2941	L-lysine biosynthesis II
Theos_0771	PWY-2942	L-lysine biosynthesis III
Theos_0771	PWY-5097	L-lysine biosynthesis VI
Theos_0771	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Theos_0771	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
Theos_0771	PWY-6559	spermidine biosynthesis II
Theos_0771	PWY-6562	norspermidine biosynthesis
Theos_0771	PWY-7153	grixazone biosynthesis
Theos_0771	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Theos_0771	PWY-7977	Theos_0771
Theos_0782	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Theos_0783	PWY-6854	ethylene biosynthesis III (microbes)
Theos_0784	PWY-5392	reductive TCA cycle II
Theos_0784	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Theos_0784	PWY-5690	TCA cycle II (plants and fungi)
Theos_0784	PWY-5913	TCA cycle VI (obligate autotrophs)
Theos_0784	PWY-6728	methylaspartate cycle
Theos_0784	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Theos_0784	PWY-7254	TCA cycle VII (acetate-producers)
Theos_0784	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Theos_0788	PWY-4202	arsenate detoxification I (glutaredoxin)
Theos_0788	PWY-5532	adenosine nucleotides degradation IV
Theos_0788	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Theos_0788	PWY-6608	guanosine nucleotides degradation III
Theos_0788	PWY-6609	adenine and adenosine salvage III
Theos_0788	PWY-6611	adenine and adenosine salvage V
Theos_0788	PWY-6620	guanine and guanosine salvage
Theos_0788	PWY-6627	salinosporamide A biosynthesis
Theos_0788	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Theos_0788	PWY-7179	purine deoxyribonucleosides degradation I
Theos_0788	PWY-7179-1	purine deoxyribonucleosides degradation
Theos_0789	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Theos_0798	PWY-7533	gliotoxin biosynthesis
Theos_0799	PWY-4041	&gamma;-glutamyl cycle
Theos_0799	PWY-7942	Theos_0799
Theos_0800	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Theos_0800	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Theos_0809	PWY-5108	L-isoleucine biosynthesis V
Theos_0809	PWY-5132	humulone biosynthesis
Theos_0809	PWY-5133	cohumulone biosynthesis
Theos_0809	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Theos_0809	PWY-7118	chitin degradation to ethanol
Theos_0809	PWY-7857	Theos_0809
Theos_0821	PWY-7980	Theos_0821
Theos_0822	PWY-7980	Theos_0822
Theos_0837	PWY-4261	glycerol degradation I
Theos_0838	PWY-4261	glycerol degradation I
Theos_0838	PWY-6118	glycerol-3-phosphate shuttle
Theos_0838	PWY-6952	glycerophosphodiester degradation
Theos_0839	PWY-6317	galactose degradation I (Leloir pathway)
Theos_0839	PWY-6527	stachyose degradation
Theos_0857	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Theos_0857	PWY-5723	Rubisco shunt
Theos_0866	PWY-5350	thiosulfate disproportionation III (rhodanese)
Theos_0866	PWY-7927	Theos_0866
Theos_0867	PWY-5350	thiosulfate disproportionation III (rhodanese)
Theos_0867	PWY-7927	Theos_0867
Theos_0869	PWY-5350	thiosulfate disproportionation III (rhodanese)
Theos_0869	PWY-7927	Theos_0869
Theos_0883	PWY-1622	formaldehyde assimilation I (serine pathway)
Theos_0883	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Theos_0883	PWY-5913	TCA cycle VI (obligate autotrophs)
Theos_0883	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Theos_0883	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Theos_0883	PWY-6549	L-glutamine biosynthesis III
Theos_0883	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Theos_0883	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Theos_0883	PWY-7124	ethylene biosynthesis V (engineered)
Theos_0884	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Theos_0894	PWY-6749	CMP-legionaminate biosynthesis I
Theos_0896	PWY-6700	queuosine biosynthesis
Theos_0897	PWY-7805	Theos_0897
Theos_0897	PWY-7807	Theos_0897
Theos_0903	PWY-6829	tRNA methylation (yeast)
Theos_0903	PWY-7285	methylwyosine biosynthesis
Theos_0903	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Theos_0907	PWY-5350	thiosulfate disproportionation III (rhodanese)
Theos_0907	PWY-7927	Theos_0907
Theos_0919	PWY-1042	glycolysis IV (plant cytosol)
Theos_0919	PWY-5484	glycolysis II (from fructose 6-phosphate)
Theos_0919	PWY-6901	superpathway of glucose and xylose degradation
Theos_0919	PWY-7003	glycerol degradation to butanol
Theos_0920	PWY-1042	glycolysis IV (plant cytosol)
Theos_0920	PWY-5484	glycolysis II (from fructose 6-phosphate)
Theos_0920	PWY-6886	1-butanol autotrophic biosynthesis
Theos_0920	PWY-6901	superpathway of glucose and xylose degradation
Theos_0920	PWY-7003	glycerol degradation to butanol
Theos_0927	PWY-7851	Theos_0927
Theos_0941	PWY-7851	Theos_0941
Theos_0942	PWY-6123	inosine-5'-phosphate biosynthesis I
Theos_0942	PWY-6124	inosine-5'-phosphate biosynthesis II
Theos_0942	PWY-7234	inosine-5'-phosphate biosynthesis III
Theos_0944	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Theos_0953	PWY-1042	glycolysis IV (plant cytosol)
Theos_0953	PWY-5484	glycolysis II (from fructose 6-phosphate)
Theos_0953	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Theos_0953	PWY-7003	glycerol degradation to butanol
Theos_0969	PWY-2941	L-lysine biosynthesis II
Theos_0969	PWY-2942	L-lysine biosynthesis III
Theos_0969	PWY-5097	L-lysine biosynthesis VI
Theos_0972	PWY-7431	aromatic biogenic amine degradation (bacteria)
Theos_0980	PWY-1341	phenylacetate degradation II (anaerobic)
Theos_0980	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Theos_0980	PWY-7716	Theos_0980
Theos_0984	PWY-4041	&gamma;-glutamyl cycle
Theos_0984	PWY-7942	Theos_0984
Theos_1009	PWY-5316	nicotine biosynthesis
Theos_1009	PWY-5381	pyridine nucleotide cycling (plants)
Theos_1009	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Theos_1009	PWY-7342	superpathway of nicotine biosynthesis
Theos_1011	PWY-5316	nicotine biosynthesis
Theos_1011	PWY-7342	superpathway of nicotine biosynthesis
Theos_1016	PWY-1042	glycolysis IV (plant cytosol)
Theos_1016	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Theos_1016	PWY-5484	glycolysis II (from fructose 6-phosphate)
Theos_1016	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Theos_1016	PWY-7385	1,3-propanediol biosynthesis (engineered)
Theos_1031	PWY-3781	aerobic respiration I (cytochrome c)
Theos_1031	PWY-4521	arsenite oxidation I (respiratory)
Theos_1031	PWY-6692	Fe(II) oxidation
Theos_1031	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Theos_1035	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Theos_1035	PWY-5743	3-hydroxypropanoate cycle
Theos_1035	PWY-5744	glyoxylate assimilation
Theos_1035	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Theos_1035	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Theos_1035	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Theos_1035	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Theos_1040	PWY-6748	nitrate reduction VII (denitrification)
Theos_1041	PWY-6748	nitrate reduction VII (denitrification)
Theos_1053	PWY-6523	nitrite-dependent anaerobic methane oxidation
Theos_1053	PWY-6748	nitrate reduction VII (denitrification)
Theos_1053	PWY-7084	nitrifier denitrification
Theos_1056	PWY-3781	aerobic respiration I (cytochrome c)
Theos_1056	PWY-4521	arsenite oxidation I (respiratory)
Theos_1056	PWY-6692	Fe(II) oxidation
Theos_1056	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Theos_1061	PWY-3781	aerobic respiration I (cytochrome c)
Theos_1061	PWY-4521	arsenite oxidation I (respiratory)
Theos_1061	PWY-6692	Fe(II) oxidation
Theos_1061	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Theos_1064	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Theos_1124	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Theos_1124	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Theos_1124	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Theos_1125	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Theos_1125	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Theos_1126	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Theos_1126	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Theos_1126	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Theos_1126	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Theos_1127	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Theos_1127	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Theos_1127	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Theos_1127	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Theos_1128	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Theos_1128	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Theos_1128	PWY-7953	Theos_1128
Theos_1129	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Theos_1129	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Theos_1129	PWY-7953	Theos_1129
Theos_1149	PWY-5943	&beta;-carotene biosynthesis
Theos_1149	PWY-5947	lutein biosynthesis
Theos_1149	PWY-6279	myxol-2' fucoside biosynthesis
Theos_1149	PWY-7591	okenone biosynthesis
Theos_1149	PWY-7938	Theos_1149
Theos_1149	PWY-7939	Theos_1149
Theos_1149	PWY-7947	Theos_1149
Theos_1153	PWY-7039	phosphatidate metabolism, as a signaling molecule
Theos_1153	PWY-7817	Theos_1153
Theos_1164	PWY-6167	flavin biosynthesis II (archaea)
Theos_1164	PWY-6168	flavin biosynthesis III (fungi)
Theos_1164	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Theos_1164	PWY-7991	Theos_1164
Theos_1165	PWY-6167	flavin biosynthesis II (archaea)
Theos_1165	PWY-6168	flavin biosynthesis III (fungi)
Theos_1165	PWY-7980	Theos_1165
Theos_1167	PWY-7991	Theos_1167
Theos_1184	PWY-7805	Theos_1184
Theos_1184	PWY-7807	Theos_1184
Theos_1189	PWY-5941	glycogen degradation II (eukaryotic)
Theos_1189	PWY-6731	starch degradation III
Theos_1189	PWY-6737	starch degradation V
Theos_1189	PWY-7238	sucrose biosynthesis II
Theos_1194	PWY-6019	pseudouridine degradation
Theos_1200	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Theos_1200	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Theos_1200	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Theos_1200	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Theos_1204	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Theos_1217	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Theos_1218	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Theos_1218	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Theos_1220	PWY-4981	L-proline biosynthesis II (from arginine)
Theos_1220	PWY-4984	urea cycle
Theos_1220	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Theos_1227	PWY-5101	L-isoleucine biosynthesis II
Theos_1227	PWY-6871	3-methylbutanol biosynthesis
Theos_1228	PWY-6871	3-methylbutanol biosynthesis
Theos_1229	PWY-5103	L-isoleucine biosynthesis III
Theos_1229	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Theos_1230	PWY-5101	L-isoleucine biosynthesis II
Theos_1230	PWY-5103	L-isoleucine biosynthesis III
Theos_1230	PWY-5104	L-isoleucine biosynthesis IV
Theos_1230	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Theos_1230	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Theos_1230	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Theos_1230	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Theos_1231	PWY-5101	L-isoleucine biosynthesis II
Theos_1231	PWY-5103	L-isoleucine biosynthesis III
Theos_1231	PWY-5104	L-isoleucine biosynthesis IV
Theos_1231	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Theos_1231	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Theos_1231	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Theos_1231	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Theos_1251	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Theos_1255	PWY-5101	L-isoleucine biosynthesis II
Theos_1255	PWY-5103	L-isoleucine biosynthesis III
Theos_1255	PWY-5104	L-isoleucine biosynthesis IV
Theos_1255	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Theos_1261	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Theos_1261	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Theos_1261	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Theos_1261	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Theos_1268	PWY-5108	L-isoleucine biosynthesis V
Theos_1268	PWY-5132	humulone biosynthesis
Theos_1268	PWY-5133	cohumulone biosynthesis
Theos_1268	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Theos_1268	PWY-7118	chitin degradation to ethanol
Theos_1268	PWY-7857	Theos_1268
Theos_1269	PWY-5108	L-isoleucine biosynthesis V
Theos_1269	PWY-5132	humulone biosynthesis
Theos_1269	PWY-5133	cohumulone biosynthesis
Theos_1269	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Theos_1269	PWY-7118	chitin degradation to ethanol
Theos_1269	PWY-7857	Theos_1269
Theos_1270	PWY-5108	L-isoleucine biosynthesis V
Theos_1270	PWY-5132	humulone biosynthesis
Theos_1270	PWY-5133	cohumulone biosynthesis
Theos_1270	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Theos_1270	PWY-7118	chitin degradation to ethanol
Theos_1270	PWY-7857	Theos_1270
Theos_1280	PWY-5941	glycogen degradation II (eukaryotic)
Theos_1280	PWY-6724	starch degradation II
Theos_1280	PWY-6737	starch degradation V
Theos_1280	PWY-7238	sucrose biosynthesis II
Theos_1281	PWY-1361	benzoyl-CoA degradation I (aerobic)
Theos_1281	PWY-5109	2-methylbutanoate biosynthesis
Theos_1281	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Theos_1281	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Theos_1281	PWY-5177	glutaryl-CoA degradation
Theos_1281	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Theos_1281	PWY-6435	4-hydroxybenzoate biosynthesis V
Theos_1281	PWY-6583	pyruvate fermentation to butanol I
Theos_1281	PWY-6863	pyruvate fermentation to hexanol
Theos_1281	PWY-6883	pyruvate fermentation to butanol II
Theos_1281	PWY-6944	androstenedione degradation
Theos_1281	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Theos_1281	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Theos_1281	PWY-7007	methyl ketone biosynthesis
Theos_1281	PWY-7046	4-coumarate degradation (anaerobic)
Theos_1281	PWY-7094	fatty acid salvage
Theos_1281	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Theos_1281	PWY-735	jasmonic acid biosynthesis
Theos_1281	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Theos_1281	PWY-7606	docosahexaenoate biosynthesis III (mammals)
Theos_1281	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
Theos_1281	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
Theos_1281	PWY-7726	Theos_1281
Theos_1281	PWY-7778	Theos_1281
Theos_1281	PWY-7779	Theos_1281
Theos_1292	PWY-4261	glycerol degradation I
Theos_1332	PWY-5667	CDP-diacylglycerol biosynthesis I
Theos_1332	PWY-5981	CDP-diacylglycerol biosynthesis III
Theos_1332	PWY-7817	Theos_1332
Theos_1333	PWY-7560	methylerythritol phosphate pathway II
Theos_1337	PWY-3341	L-proline biosynthesis III
Theos_1337	PWY-4981	L-proline biosynthesis II (from arginine)
Theos_1337	PWY-6344	L-ornithine degradation II (Stickland reaction)
Theos_1344	PWY-2201	folate transformations I
Theos_1344	PWY-3841	folate transformations II
Theos_1344	PWY-7977	Theos_1344
Theos_1345	PWY-5381	pyridine nucleotide cycling (plants)
Theos_1352	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Theos_1352	PWY-5686	UMP biosynthesis
Theos_1352	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Theos_1352	PWY-7790	Theos_1352
Theos_1352	PWY-7791	Theos_1352
Theos_1354	PWY-6829	tRNA methylation (yeast)
Theos_1356	PWY-5155	&beta;-alanine biosynthesis III
Theos_1368	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Theos_1368	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Theos_1368	PWY-7766	Theos_1368
Theos_1370	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Theos_1374	PWY-3821	galactose degradation III
Theos_1374	PWY-6317	galactose degradation I (Leloir pathway)
Theos_1374	PWY-6527	stachyose degradation
Theos_1377	PWY-1881	formate oxidation to CO<sub>2</sub>
Theos_1377	PWY-5497	purine nucleobases degradation II (anaerobic)
Theos_1377	PWY-6696	oxalate degradation III
Theos_1377	PWY-7985	Theos_1377
Theos_1391	PWY-6832	2-aminoethylphosphonate degradation II
Theos_1395	PWY-7193	pyrimidine ribonucleosides salvage I
Theos_1400	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Theos_1401	PWY-2781	<i>cis</i>-zeatin biosynthesis
Theos_1403	PWY-7199	pyrimidine deoxyribonucleosides salvage
Theos_1413	PWY-2941	L-lysine biosynthesis II
Theos_1413	PWY-2942	L-lysine biosynthesis III
Theos_1413	PWY-5097	L-lysine biosynthesis VI
Theos_1415	PWY-6556	pyrimidine ribonucleosides salvage II
Theos_1415	PWY-7181	pyrimidine deoxyribonucleosides degradation
Theos_1415	PWY-7193	pyrimidine ribonucleosides salvage I
Theos_1415	PWY-7199	pyrimidine deoxyribonucleosides salvage
Theos_1445	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Theos_1452	PWY-6857	retinol biosynthesis
Theos_1462	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
Theos_1464	PWY-7980	Theos_1464
Theos_1465	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Theos_1465	PWY-5723	Rubisco shunt
Theos_1467	PWY-7799	Theos_1467
Theos_1467	PWY-7800	Theos_1467
Theos_1473	PWY-7805	Theos_1473
Theos_1473	PWY-7807	Theos_1473
Theos_1484	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Theos_1484	PWY-2201	folate transformations I
Theos_1484	PWY-3841	folate transformations II
Theos_1484	PWY-5030	L-histidine degradation III
Theos_1484	PWY-5497	purine nucleobases degradation II (anaerobic)
Theos_1484	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Theos_1484	PWY-7909	Theos_1484
Theos_1493	PWY-40	putrescine biosynthesis I
Theos_1493	PWY-6305	putrescine biosynthesis IV
Theos_1497	PWY-3781	aerobic respiration I (cytochrome c)
Theos_1497	PWY-4521	arsenite oxidation I (respiratory)
Theos_1497	PWY-6692	Fe(II) oxidation
Theos_1497	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Theos_1498	PWY-3781	aerobic respiration I (cytochrome c)
Theos_1498	PWY-4521	arsenite oxidation I (respiratory)
Theos_1498	PWY-6692	Fe(II) oxidation
Theos_1498	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Theos_1499	PWY-3781	aerobic respiration I (cytochrome c)
Theos_1499	PWY-4521	arsenite oxidation I (respiratory)
Theos_1499	PWY-6692	Fe(II) oxidation
Theos_1499	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Theos_1513	PWY-4381	fatty acid biosynthesis initiation I
Theos_1513	PWY-5743	3-hydroxypropanoate cycle
Theos_1513	PWY-5744	glyoxylate assimilation
Theos_1513	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Theos_1513	PWY-6722	candicidin biosynthesis
Theos_1531	PWY-1361	benzoyl-CoA degradation I (aerobic)
Theos_1531	PWY-5109	2-methylbutanoate biosynthesis
Theos_1531	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Theos_1531	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Theos_1531	PWY-5177	glutaryl-CoA degradation
Theos_1531	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Theos_1531	PWY-6435	4-hydroxybenzoate biosynthesis V
Theos_1531	PWY-6583	pyruvate fermentation to butanol I
Theos_1531	PWY-6863	pyruvate fermentation to hexanol
Theos_1531	PWY-6883	pyruvate fermentation to butanol II
Theos_1531	PWY-6944	androstenedione degradation
Theos_1531	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Theos_1531	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Theos_1531	PWY-7007	methyl ketone biosynthesis
Theos_1531	PWY-7046	4-coumarate degradation (anaerobic)
Theos_1531	PWY-7094	fatty acid salvage
Theos_1531	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Theos_1531	PWY-735	jasmonic acid biosynthesis
Theos_1531	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Theos_1531	PWY-7606	docosahexaenoate biosynthesis III (mammals)
Theos_1531	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
Theos_1531	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
Theos_1531	PWY-7726	Theos_1531
Theos_1531	PWY-7778	Theos_1531
Theos_1531	PWY-7779	Theos_1531
Theos_1540	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Theos_1540	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Theos_1540	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Theos_1540	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Theos_1540	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Theos_1540	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Theos_1540	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Theos_1540	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Theos_1544	PWY-7942	Theos_1544
Theos_1546	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Theos_1546	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Theos_1546	PWY-7622	UDP-galactofuranose biosynthesis
Theos_1552	PWY-7892	Theos_1552
Theos_1555	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Theos_1556	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Theos_1561	PWY-3461	L-tyrosine biosynthesis II
Theos_1561	PWY-3462	L-phenylalanine biosynthesis II
Theos_1561	PWY-6120	L-tyrosine biosynthesis III
Theos_1561	PWY-6627	salinosporamide A biosynthesis
Theos_1561	PWY-7626	bacilysin biosynthesis
Theos_1562	PWY-6853	ethylene biosynthesis II (microbes)
Theos_1563	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Theos_1563	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Theos_1568	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Theos_1568	PWY-6578	8-amino-7-oxononanoate biosynthesis III
Theos_1568	PWY-7147	8-amino-7-oxononanoate biosynthesis II
Theos_1583	PWY-5741	ethylmalonyl-CoA pathway
Theos_1583	PWY-5743	3-hydroxypropanoate cycle
Theos_1583	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Theos_1583	PWY-6728	methylaspartate cycle
Theos_1583	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Theos_1583	PWY-7854	Theos_1583
Theos_1586	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Theos_1586	PWY-3461	L-tyrosine biosynthesis II
Theos_1586	PWY-3462	L-phenylalanine biosynthesis II
Theos_1586	PWY-6120	L-tyrosine biosynthesis III
Theos_1586	PWY-6164	3-dehydroquinate biosynthesis I
Theos_1586	PWY-6627	salinosporamide A biosynthesis
Theos_1586	PWY-7626	bacilysin biosynthesis
Theos_1586	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
Theos_1589	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Theos_1596	PWY-6938	NADH repair
Theos_1597	PWY-702	L-methionine biosynthesis II
Theos_1616	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
Theos_1629	PWY-6898	thiamin salvage III
Theos_1629	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Theos_1629	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Theos_1629	PWY-7356	thiamin salvage IV (yeast)
Theos_1632	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Theos_1632	PWY-6596	adenosine nucleotides degradation I
Theos_1632	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Theos_1644	PWY-5484	glycolysis II (from fructose 6-phosphate)
Theos_1645	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Theos_1645	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Theos_1645	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Theos_1645	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Theos_1645	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Theos_1645	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Theos_1645	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Theos_1645	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Theos_1658	PWY-3781	aerobic respiration I (cytochrome c)
Theos_1658	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Theos_1658	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Theos_1658	PWY-5690	TCA cycle II (plants and fungi)
Theos_1658	PWY-6728	methylaspartate cycle
Theos_1658	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Theos_1658	PWY-7254	TCA cycle VII (acetate-producers)
Theos_1658	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Theos_1659	PWY-3781	aerobic respiration I (cytochrome c)
Theos_1659	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Theos_1659	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Theos_1659	PWY-5690	TCA cycle II (plants and fungi)
Theos_1659	PWY-6728	methylaspartate cycle
Theos_1659	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Theos_1659	PWY-7254	TCA cycle VII (acetate-producers)
Theos_1659	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Theos_1662	PWY-6834	spermidine biosynthesis III
Theos_1671	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Theos_1671	PWY-7177	UTP and CTP dephosphorylation II
Theos_1671	PWY-7185	UTP and CTP dephosphorylation I
Theos_1680	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Theos_1680	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Theos_1680	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Theos_1680	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Theos_1680	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Theos_1680	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Theos_1703	PWY-5913	TCA cycle VI (obligate autotrophs)
Theos_1703	PWY-6549	L-glutamine biosynthesis III
Theos_1703	PWY-6728	methylaspartate cycle
Theos_1703	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Theos_1703	PWY-7124	ethylene biosynthesis V (engineered)
Theos_1703	PWY-7254	TCA cycle VII (acetate-producers)
Theos_1703	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Theos_1721	PWY-723	alkylnitronates degradation
Theos_1730	PWY-1042	glycolysis IV (plant cytosol)
Theos_1730	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Theos_1730	PWY-5484	glycolysis II (from fructose 6-phosphate)
Theos_1730	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Theos_1730	PWY-7385	1,3-propanediol biosynthesis (engineered)
Theos_1731	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Theos_1731	PWY-5723	Rubisco shunt
Theos_1732	PWY-5723	Rubisco shunt
Theos_1734	PWY-5532	adenosine nucleotides degradation IV
Theos_1734	PWY-5723	Rubisco shunt
Theos_1735	PWY-5532	adenosine nucleotides degradation IV
Theos_1735	PWY-5723	Rubisco shunt
Theos_1736	PWY-5484	glycolysis II (from fructose 6-phosphate)
Theos_1745	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Theos_1745	PWY-5723	Rubisco shunt
Theos_1745	PWY-6891	thiazole biosynthesis II (Bacillus)
Theos_1745	PWY-6892	thiazole biosynthesis I (E. coli)
Theos_1745	PWY-6901	superpathway of glucose and xylose degradation
Theos_1745	PWY-7560	methylerythritol phosphate pathway II
Theos_1748	PWY-6823	molybdenum cofactor biosynthesis
Theos_1756	PWY-1042	glycolysis IV (plant cytosol)
Theos_1756	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Theos_1756	PWY-5484	glycolysis II (from fructose 6-phosphate)
Theos_1756	PWY-5723	Rubisco shunt
Theos_1756	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Theos_1756	PWY-6886	1-butanol autotrophic biosynthesis
Theos_1756	PWY-6901	superpathway of glucose and xylose degradation
Theos_1756	PWY-7003	glycerol degradation to butanol
Theos_1756	PWY-7124	ethylene biosynthesis V (engineered)
Theos_1756	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Theos_1757	PWY-7805	Theos_1757
Theos_1757	PWY-7807	Theos_1757
Theos_1762	PWY-7205	CMP phosphorylation
Theos_1763	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Theos_1764	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Theos_1782	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Theos_1801	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Theos_1801	PWY-7118	chitin degradation to ethanol
Theos_1801	PWY-7294	xylose degradation IV
Theos_1801	PWY-7295	L-arabinose degradation IV
Theos_1801	PWY-7854	Theos_1801
Theos_1820	PWY-6700	queuosine biosynthesis
Theos_1838	PWY-101	photosynthesis light reactions
Theos_1867	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Theos_1876	PWY-622	starch biosynthesis
Theos_1876	PWY-7902	Theos_1876
Theos_1880	PWY-622	starch biosynthesis
Theos_1883	PWY-7560	methylerythritol phosphate pathway II
Theos_1888	PWY-6823	molybdenum cofactor biosynthesis
Theos_1898	PWY-7560	methylerythritol phosphate pathway II
Theos_1900	PWY-6823	molybdenum cofactor biosynthesis
Theos_1910	PWY-7887	Theos_1910
Theos_1910	PWY-7892	Theos_1910
Theos_1930	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Theos_1930	PWY-622	starch biosynthesis
Theos_1930	PWY-7900	Theos_1930
Theos_1931	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Theos_1931	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Theos_1932	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Theos_1932	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Theos_1940	PWY-3081	L-lysine biosynthesis V
Theos_1940	PWY-6871	3-methylbutanol biosynthesis
Theos_1940	PWY-7710	Theos_1940
Theos_1957	PWY-2201	folate transformations I
Theos_1957	PWY-3841	folate transformations II
Theos_1966	PWY-6167	flavin biosynthesis II (archaea)
Theos_1966	PWY-6168	flavin biosynthesis III (fungi)
Theos_1973	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Theos_1973	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Theos_1973	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Theos_1987	PWY-5839	menaquinol-7 biosynthesis
Theos_1987	PWY-5844	menaquinol-9 biosynthesis
Theos_1987	PWY-5849	menaquinol-6 biosynthesis
Theos_1987	PWY-5890	menaquinol-10 biosynthesis
Theos_1987	PWY-5891	menaquinol-11 biosynthesis
Theos_1987	PWY-5892	menaquinol-12 biosynthesis
Theos_1987	PWY-5895	menaquinol-13 biosynthesis
Theos_1992	PWY-5958	acridone alkaloid biosynthesis
Theos_1992	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Theos_1992	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Theos_1993	PWY-5958	acridone alkaloid biosynthesis
Theos_1993	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Theos_1993	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Theos_1998	PWY-6891	thiazole biosynthesis II (Bacillus)
Theos_1998	PWY-6892	thiazole biosynthesis I (E. coli)
Theos_1998	PWY-7560	methylerythritol phosphate pathway II
Theos_2017	PWY-6823	molybdenum cofactor biosynthesis
Theos_2017	PWY-7887	Theos_2017
Theos_2020	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Theos_2023	PWY-7158	L-phenylalanine degradation V
Theos_2027	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Theos_2027	PWY-6148	tetrahydromethanopterin biosynthesis
Theos_2027	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Theos_2027	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Theos_2027	PWY-7852	Theos_2027
Theos_2027	PWY-7853	Theos_2027
Theos_2036	PWY-3341	L-proline biosynthesis III
Theos_2036	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Theos_2037	PWY-3341	L-proline biosynthesis III
Theos_2037	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Theos_2069	PWY-7560	methylerythritol phosphate pathway II
Theos_2070	PWY-7560	methylerythritol phosphate pathway II
Theos_2071	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
Theos_2072	PWY-6832	2-aminoethylphosphonate degradation II
Theos_2091	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Theos_2091	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Theos_2092	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Theos_2092	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Theos_2095	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Theos_2095	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Theos_2104	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Theos_2104	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Theos_2108	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Theos_2111	PWY-6599	guanine and guanosine salvage II
Theos_2111	PWY-6609	adenine and adenosine salvage III
Theos_2111	PWY-6610	adenine and adenosine salvage IV
Theos_2111	PWY-6620	guanine and guanosine salvage
Theos_2142	PWY-6614	tetrahydrofolate biosynthesis
Theos_2143	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Theos_2143	PWY-6148	tetrahydromethanopterin biosynthesis
Theos_2143	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Theos_2143	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Theos_2147	PWY-3121	linamarin degradation
Theos_2147	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Theos_2147	PWY-6002	lotaustralin degradation
Theos_2147	PWY-6788	cellulose degradation II (fungi)
Theos_2147	PWY-7091	linustatin bioactivation
Theos_2147	PWY-7092	neolinustatin bioactivation
Theos_2147	PWY-7913	Theos_2147
Theos_2156	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Theos_2156	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Theos_2156	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Theos_2156	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Theos_2156	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Theos_2156	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Theos_2156	PWY-7205	CMP phosphorylation
Theos_2156	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Theos_2156	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Theos_2156	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Theos_2156	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Theos_2156	PWY-7224	purine deoxyribonucleosides salvage
Theos_2156	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Theos_2156	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Theos_2159	PWY-6891	thiazole biosynthesis II (Bacillus)
Theos_2159	PWY-6892	thiazole biosynthesis I (E. coli)
Theos_2159	PWY-7560	methylerythritol phosphate pathway II
Theos_2164	PWY-6749	CMP-legionaminate biosynthesis I
Theos_2176	PWY-6936	seleno-amino acid biosynthesis
Theos_2179	PWY-5381	pyridine nucleotide cycling (plants)
Theos_2179	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Theos_2179	PWY-6596	adenosine nucleotides degradation I
Theos_2179	PWY-6606	guanosine nucleotides degradation II
Theos_2179	PWY-6607	guanosine nucleotides degradation I
Theos_2179	PWY-6608	guanosine nucleotides degradation III
Theos_2179	PWY-7185	UTP and CTP dephosphorylation I
Theos_2179	PWY-7821	Theos_2179
Theos_2185	PWY-2161	folate polyglutamylation
Theos_2187	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Theos_2187	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Theos_2195	PWY-1042	glycolysis IV (plant cytosol)
Theos_2195	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Theos_2195	PWY-5484	glycolysis II (from fructose 6-phosphate)
Theos_2195	PWY-7385	1,3-propanediol biosynthesis (engineered)
Theos_2198	PWY-7805	Theos_2198
Theos_2198	PWY-7807	Theos_2198
Theos_2209	PWY-5419	catechol degradation to 2-oxopent-4-enoate II
Theos_2209	PWY-5641	2-nitrotoluene degradation
Theos_2230	PWY-5419	catechol degradation to 2-oxopent-4-enoate II
Theos_2230	PWY-5641	2-nitrotoluene degradation
Theos_2285	PWY-3121	linamarin degradation
Theos_2285	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Theos_2285	PWY-6002	lotaustralin degradation
Theos_2285	PWY-6788	cellulose degradation II (fungi)
Theos_2285	PWY-7091	linustatin bioactivation
Theos_2285	PWY-7092	neolinustatin bioactivation
Theos_2285	PWY-7913	Theos_2285
Theos_2290	PWY-6910	hydroxymethylpyrimidine salvage
Theos_2290	PWY-7356	thiamin salvage IV (yeast)
Theos_2290	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Theos_2293	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Theos_2295	PWY-6891	thiazole biosynthesis II (Bacillus)
Theos_2295	PWY-6892	thiazole biosynthesis I (E. coli)
Theos_2297	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Theos_2297	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Theos_2297	PWY-6897	thiamin salvage II
Theos_2297	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Theos_2297	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Theos_2297	PWY-7356	thiamin salvage IV (yeast)
Theos_2297	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Theos_2298	PWY-6683	sulfate reduction III (assimilatory)
Theos_2299	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Theos_2299	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Theos_2300	PWY-5194	siroheme biosynthesis
Theos_2300	PWY-5196	factor 430 biosynthesis
Theos_2300	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Theos_2303	PWY-5194	siroheme biosynthesis
Theos_2303	PWY-5196	factor 430 biosynthesis
Theos_2303	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Theos_2304	PWY-5278	sulfite oxidation III
Theos_2304	PWY-5340	sulfate activation for sulfonation
Theos_2304	PWY-6683	sulfate reduction III (assimilatory)
Theos_2304	PWY-6932	selenate reduction
Theos_2311	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Theos_2311	PWY-6269	adenosylcobalamin salvage from cobinamide II
Theos_2311	PWY-7961	Theos_2311
Theos_2311	PWY-7963	Theos_2311
Theos_2311	PWY-7964	Theos_2311
Theos_2311	PWY-7965	Theos_2311
Theos_2311	PWY-7966	Theos_2311
Theos_2311	PWY-7967	Theos_2311
Theos_2311	PWY-7968	Theos_2311
Theos_2311	PWY-7969	Theos_2311
Theos_2311	PWY-7970	Theos_2311
Theos_2311	PWY-7975	Theos_2311
Theos_2313	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Theos_2313	PWY-6269	adenosylcobalamin salvage from cobinamide II
Theos_2313	PWY-7964	Theos_2313
Theos_2313	PWY-7965	Theos_2313
Theos_2313	PWY-7966	Theos_2313
Theos_2313	PWY-7967	Theos_2313
Theos_2313	PWY-7968	Theos_2313
Theos_2313	PWY-7969	Theos_2313
Theos_2313	PWY-7970	Theos_2313
Theos_2316	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Theos_2318	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Theos_2320	PWY-5194	siroheme biosynthesis
Theos_2320	PWY-5196	factor 430 biosynthesis
Theos_2320	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Theos_2322	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Theos_2323	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Theos_2325	PWY-5194	siroheme biosynthesis
Theos_2325	PWY-5196	factor 430 biosynthesis
Theos_2325	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Theos_2331	PWY-6269	adenosylcobalamin salvage from cobinamide II
Theos_2331	PWY-7962	Theos_2331
Theos_2331	PWY-7971	Theos_2331
Theos_2331	PWY-7972	Theos_2331
Theos_2341	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Theos_2341	PWY-5491	diethylphosphate degradation
Theos_2343	PWY-5381	pyridine nucleotide cycling (plants)
Theos_2343	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Theos_2343	PWY-6596	adenosine nucleotides degradation I
Theos_2343	PWY-6606	guanosine nucleotides degradation II
Theos_2343	PWY-6607	guanosine nucleotides degradation I
Theos_2343	PWY-6608	guanosine nucleotides degradation III
Theos_2343	PWY-7185	UTP and CTP dephosphorylation I
Theos_2343	PWY-7821	Theos_2343
Theos_2350	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Theos_2350	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Theos_2350	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Theos_2350	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Theos_2350	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Theos_2350	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Theos_2350	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Theos_2350	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Theos_2351	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Theos_2351	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Theos_2351	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Theos_2351	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Theos_2351	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Theos_2351	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Theos_2351	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Theos_2351	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Theos_2399	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Theos_2399	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Theos_2399	PWY-7242	D-fructuronate degradation
Theos_2399	PWY-7310	D-glucosaminate degradation
Theos_2399	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
Theos_2432	PWY-2941	L-lysine biosynthesis II
Theos_2432	PWY-2942	L-lysine biosynthesis III
Theos_2432	PWY-5097	L-lysine biosynthesis VI
Theos_2433	PWY-6906	chitin derivatives degradation
Theos_2433	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Theos_2433	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Theos_2443	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Theos_2443	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Theos_2443	PWY-7717	Theos_2443
Theos_2443	PWY-7733	Theos_2443
Theos_2443	PWY-7734	Theos_2443
Theos_2443	PWY-7765	Theos_2443
Theos_2450	PWY-5642	2,4-dinitrotoluene degradation
Theos_2473	PWY-5162	2-oxopentenoate degradation
Theos_2474	PWY-5162	2-oxopentenoate degradation
Theos_2474	PWY-5436	L-threonine degradation IV
Theos_2474	PWY-5480	pyruvate fermentation to ethanol I
Theos_2474	PWY-6587	pyruvate fermentation to ethanol III
Theos_2474	PWY-7085	triethylamine degradation
Theos_2474	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
