locus-tag class description AV541_00040 PF02779 Transketolase, pyrimidine binding domain AV541_00040 PF02780 Transketolase, C-terminal domain AV541_00050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV541_00050 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV541_00095 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AV541_00095 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AV541_00110 PF03099 Biotin/lipoate A/B protein ligase family AV541_00115 PF00106 short chain dehydrogenase AV541_00125 PF01281 Ribosomal protein L9, N-terminal domain AV541_00125 PF03948 Ribosomal protein L9, C-terminal domain AV541_00130 PF01084 Ribosomal protein S18 AV541_00135 PF00436 Single-strand binding protein family AV541_00140 PF01250 Ribosomal protein S6 AV541_00150 PF00687 Ribosomal protein L1p/L10e family AV541_00155 PF03946 Ribosomal protein L11, N-terminal domain AV541_00155 PF00298 Ribosomal protein L11, RNA binding domain AV541_00160 PF02357 Transcription termination factor nusG AV541_00160 PF00467 KOW motif AV541_00165 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AV541_00170 PF00471 Ribosomal protein L33 AV541_00175 PF03144 Elongation factor Tu domain 2 AV541_00175 PF00009 Elongation factor Tu GTP binding domain AV541_00175 PF03143 Elongation factor Tu C-terminal domain AV541_00200 PF00753 Metallo-beta-lactamase superfamily AV541_00200 PF10996 Beta-Casp domain AV541_00200 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AV541_00215 PF01475 Ferric uptake regulator family AV541_00220 PF02789 Cytosol aminopeptidase family, N-terminal domain AV541_00220 PF00883 Cytosol aminopeptidase family, catalytic domain AV541_00235 PF12849 PBP superfamily domain AV541_00240 PF00528 Binding-protein-dependent transport system inner membrane component AV541_00245 PF00528 Binding-protein-dependent transport system inner membrane component AV541_00250 PF00005 ABC transporter AV541_00255 PF07690 Major Facilitator Superfamily AV541_00270 PF08239 Bacterial SH3 domain AV541_00270 PF00877 NlpC/P60 family AV541_00270 PF01476 LysM domain AV541_00295 PF00118 TCP-1/cpn60 chaperonin family AV541_00300 PF00166 Chaperonin 10 Kd subunit AV541_00305 PF08032 RNA 2'-O ribose methyltransferase substrate binding AV541_00305 PF00588 SpoU rRNA Methylase family AV541_00320 PF17863 AAA lid domain AV541_00320 PF07726 ATPase family associated with various cellular activities (AAA) AV541_00330 PF00342 Phosphoglucose isomerase AV541_00340 PF00291 Pyridoxal-phosphate dependent enzyme AV541_00365 PF00206 Lyase AV541_00365 PF14698 Argininosuccinate lyase C-terminal AV541_00365 PF00583 Acetyltransferase (GNAT) family AV541_00370 PF14698 Argininosuccinate lyase C-terminal AV541_00370 PF00206 Lyase AV541_00385 PF00082 Subtilase family AV541_00385 PF04151 Bacterial pre-peptidase C-terminal domain AV541_00390 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV541_00390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV541_00395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AV541_00395 PF00364 Biotin-requiring enzyme AV541_00395 PF02817 e3 binding domain AV541_00400 PF00676 Dehydrogenase E1 component AV541_00400 PF16870 2-oxoglutarate dehydrogenase C-terminal AV541_00400 PF02779 Transketolase, pyrimidine binding domain AV541_00400 PF16078 2-oxoglutarate dehydrogenase N-terminus AV541_00405 PF00378 Enoyl-CoA hydratase/isomerase AV541_00410 PF07499 RuvA, C-terminal domain AV541_00410 PF01330 RuvA N terminal domain AV541_00425 PF03641 Possible lysine decarboxylase AV541_00430 PF00582 Universal stress protein family AV541_00435 PF00588 SpoU rRNA Methylase family AV541_00435 PF08032 RNA 2'-O ribose methyltransferase substrate binding AV541_00440 PF07687 Peptidase dimerisation domain AV541_00440 PF01546 Peptidase family M20/M25/M40 AV541_00450 PF00480 ROK family AV541_00480 PF04551 GcpE protein AV541_00495 PF01594 AI-2E family transporter AV541_00500 PF02628 Cytochrome oxidase assembly protein AV541_00500 PF01040 UbiA prenyltransferase family AV541_00575 PF01933 Uncharacterised protein family UPF0052 AV541_00585 PF02911 Formyl transferase, C-terminal domain AV541_00585 PF00551 Formyl transferase AV541_00590 PF01327 Polypeptide deformylase AV541_00605 PF01676 Metalloenzyme superfamily AV541_00625 PF00857 Isochorismatase family AV541_00630 PF00730 HhH-GPD superfamily base excision DNA repair protein AV541_00640 PF02811 PHP domain AV541_00655 PF02641 Uncharacterized ACR, COG1993 AV541_00665 PF00885 6,7-dimethyl-8-ribityllumazine synthase AV541_00715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AV541_00720 PF00291 Pyridoxal-phosphate dependent enzyme AV541_00725 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AV541_00730 PF00571 CBS domain AV541_00730 PF01380 SIS domain AV541_00735 PF00582 Universal stress protein family AV541_00740 PF07690 Major Facilitator Superfamily AV541_00755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AV541_00755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AV541_00755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AV541_00755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AV541_00760 PF00528 Binding-protein-dependent transport system inner membrane component AV541_00765 PF00528 Binding-protein-dependent transport system inner membrane component AV541_00770 PF01547 Bacterial extracellular solute-binding protein AV541_00785 PF00313 'Cold-shock' DNA-binding domain AV541_00790 PF01975 Survival protein SurE AV541_00810 PF00437 Type II/IV secretion system protein AV541_00815 PF02934 GatB/GatE catalytic domain AV541_00815 PF02637 GatB domain AV541_00820 PF02769 AIR synthase related protein, C-terminal domain AV541_00820 PF00586 AIR synthase related protein, N-terminal domain AV541_00825 PF00300 Histidine phosphatase superfamily (branch 1) AV541_00865 PF04012 PspA/IM30 family AV541_00895 PF00034 Cytochrome c AV541_00900 PF00224 Pyruvate kinase, barrel domain AV541_00900 PF02887 Pyruvate kinase, alpha/beta domain AV541_00910 PF00712 DNA polymerase III beta subunit, N-terminal domain AV541_00910 PF02767 DNA polymerase III beta subunit, central domain AV541_00910 PF02768 DNA polymerase III beta subunit, C-terminal domain AV541_00915 PF08299 Bacterial dnaA protein helix-turn-helix AV541_00915 PF00308 Bacterial dnaA protein AV541_00915 PF11638 DnaA N-terminal domain AV541_00925 PF02527 rRNA small subunit methyltransferase G AV541_00930 PF13614 AAA domain AV541_00960 PF00719 Inorganic pyrophosphatase AV541_00970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV541_00975 PF00365 Phosphofructokinase AV541_00990 PF01409 tRNA synthetases class II core domain (F) AV541_00990 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AV541_00995 PF01266 FAD dependent oxidoreductase AV541_01000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV541_01005 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AV541_01005 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AV541_01005 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AV541_01015 PF02583 Metal-sensitive transcriptional repressor AV541_01030 PF00696 Amino acid kinase family AV541_01035 PF01965 DJ-1/PfpI family AV541_01045 PF03819 MazG nucleotide pyrophosphohydrolase domain AV541_01055 PF01906 Putative heavy-metal-binding AV541_01065 PF02630 SCO1/SenC AV541_01070 PF02535 ZIP Zinc transporter AV541_01075 PF00472 RF-1 domain AV541_01075 PF03462 PCRF domain AV541_01085 PF02770 Acyl-CoA dehydrogenase, middle domain AV541_01085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV541_01085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV541_01090 PF04055 Radical SAM superfamily AV541_01095 PF13416 Bacterial extracellular solute-binding protein AV541_01105 PF00034 Cytochrome c AV541_01115 PF00355 Rieske [2Fe-2S] domain AV541_01120 PF13631 Cytochrome b(N-terminal)/b6/petB AV541_01130 PF00171 Aldehyde dehydrogenase family AV541_01135 PF01472 PUA domain AV541_01135 PF00696 Amino acid kinase family AV541_01155 PF01923 Cobalamin adenosyltransferase AV541_01165 PF00005 ABC transporter AV541_01210 PF02441 Flavoprotein AV541_01220 PF01255 Putative undecaprenyl diphosphate synthase AV541_01240 PF00330 Aconitase family (aconitate hydratase) AV541_01245 PF00694 Aconitase C-terminal domain AV541_01255 PF08271 TFIIB zinc-binding AV541_01265 PF02774 Semialdehyde dehydrogenase, dimerisation domain AV541_01265 PF01118 Semialdehyde dehydrogenase, NAD binding domain AV541_01270 PF00696 Amino acid kinase family AV541_01280 PF00795 Carbon-nitrogen hydrolase AV541_01280 PF02540 NAD synthase AV541_01300 PF13932 GidA associated domain AV541_01300 PF01134 Glucose inhibited division protein A AV541_01310 PF01380 SIS domain AV541_01315 PF00395 S-layer homology domain AV541_01320 PF00271 Helicase conserved C-terminal domain AV541_01320 PF12344 Ultra-violet resistance protein B AV541_01320 PF17757 UvrB interaction domain AV541_01320 PF04851 Type III restriction enzyme, res subunit AV541_01320 PF02151 UvrB/uvrC motif AV541_01325 PF02817 e3 binding domain AV541_01325 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AV541_01325 PF00364 Biotin-requiring enzyme AV541_01330 PF02073 Thermophilic metalloprotease (M29) AV541_01340 PF00005 ABC transporter AV541_01360 PF00528 Binding-protein-dependent transport system inner membrane component AV541_01370 PF16193 AAA C-terminal domain AV541_01370 PF00004 ATPase family associated with various cellular activities (AAA) AV541_01370 PF12002 MgsA AAA+ ATPase C terminal AV541_01395 PF01227 GTP cyclohydrolase I AV541_01410 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AV541_01410 PF02824 TGS domain AV541_01410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV541_01410 PF03129 Anticodon binding domain AV541_01440 PF09115 DNA polymerase III, delta subunit, C terminal AV541_01470 PF01209 ubiE/COQ5 methyltransferase family AV541_01475 PF01451 Low molecular weight phosphotyrosine protein phosphatase AV541_01505 PF00117 Glutamine amidotransferase class-I AV541_01510 PF00591 Glycosyl transferase family, a/b domain AV541_01510 PF02885 Glycosyl transferase family, helical bundle domain AV541_01515 PF00355 Rieske [2Fe-2S] domain AV541_01530 PF00005 ABC transporter AV541_01540 PF00463 Isocitrate lyase family AV541_01545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV541_01545 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV541_01550 PF00005 ABC transporter AV541_01555 PF00005 ABC transporter AV541_01555 PF02687 FtsX-like permease family AV541_01555 PF12704 MacB-like periplasmic core domain AV541_01565 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AV541_01565 PF02272 DHHA1 domain AV541_01565 PF01411 tRNA synthetases class II (A) AV541_01575 PF03652 Holliday junction resolvase AV541_01585 PF00528 Binding-protein-dependent transport system inner membrane component AV541_01600 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AV541_01600 PF13378 Enolase C-terminal domain-like AV541_01605 PF13419 Haloacid dehalogenase-like hydrolase AV541_01615 PF01571 Aminomethyltransferase folate-binding domain AV541_01620 PF18146 Damage-inducible protein CinA KH domain AV541_01620 PF00994 Probable molybdopterin binding domain AV541_01620 PF02464 Competence-damaged protein AV541_01625 PF02834 LigT like Phosphoesterase AV541_01630 PF00154 recA bacterial DNA recombination protein AV541_01635 PF01966 HD domain AV541_01635 PF00013 KH domain AV541_01635 PF12072 Domain of unknown function (DUF3552) AV541_01645 PF07977 FabA-like domain AV541_01660 PF00623 RNA polymerase Rpb1, domain 2 AV541_01660 PF04998 RNA polymerase Rpb1, domain 5 AV541_01660 PF04997 RNA polymerase Rpb1, domain 1 AV541_01660 PF05000 RNA polymerase Rpb1, domain 4 AV541_01660 PF04983 RNA polymerase Rpb1, domain 3 AV541_01675 PF00561 alpha/beta hydrolase fold AV541_01690 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AV541_01690 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AV541_01690 PF06827 Zinc finger found in FPG and IleRS AV541_01700 PF03061 Thioesterase superfamily AV541_01705 PF01329 Pterin 4 alpha carbinolamine dehydratase AV541_01720 PF01425 Amidase AV541_01735 PF02142 MGS-like domain AV541_01740 PF03819 MazG nucleotide pyrophosphohydrolase domain AV541_01760 PF02542 YgbB family AV541_01765 PF03458 UPF0126 domain AV541_01770 PF01967 MoaC family AV541_01805 PF12161 HsdM N-terminal domain AV541_01805 PF02384 N-6 DNA Methylase AV541_01835 PF00829 Ribosomal prokaryotic L21 protein AV541_01840 PF01016 Ribosomal L27 protein AV541_01850 PF01467 Cytidylyltransferase-like AV541_01875 PF02569 Pantoate-beta-alanine ligase AV541_01880 PF00437 Type II/IV secretion system protein AV541_01885 PF01116 Fructose-bisphosphate aldolase class-II AV541_01895 PF02885 Glycosyl transferase family, helical bundle domain AV541_01895 PF00591 Glycosyl transferase family, a/b domain AV541_01895 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AV541_01900 PF08460 Bacterial SH3 domain AV541_01900 PF01551 Peptidase family M23 AV541_01910 PF17848 Acetyl-coA carboxylase zinc finger domain AV541_01910 PF01039 Carboxyl transferase domain AV541_01915 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AV541_02005 PF00534 Glycosyl transferases group 1 AV541_02010 PF00483 Nucleotidyl transferase AV541_02010 PF01050 Mannose-6-phosphate isomerase AV541_02015 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AV541_02025 PF00085 Thioredoxin AV541_02030 PF02504 Fatty acid synthesis protein AV541_02040 PF02585 GlcNAc-PI de-N-acetylase AV541_02050 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AV541_02055 PF00156 Phosphoribosyl transferase domain AV541_02065 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AV541_02065 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AV541_02075 PF00561 alpha/beta hydrolase fold AV541_02075 PF00364 Biotin-requiring enzyme AV541_02085 PF01592 NifU-like N terminal domain AV541_02090 PF00266 Aminotransferase class-V AV541_02100 PF07732 Multicopper oxidase AV541_02100 PF07731 Multicopper oxidase AV541_02140 PF00512 His Kinase A (phospho-acceptor) domain AV541_02140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV541_02140 PF00672 HAMP domain AV541_02145 PF00486 Transcriptional regulatory protein, C terminal AV541_02145 PF00072 Response regulator receiver domain AV541_02155 PF00403 Heavy-metal-associated domain AV541_02160 PF02583 Metal-sensitive transcriptional repressor AV541_02165 PF00403 Heavy-metal-associated domain AV541_02170 PF02824 TGS domain AV541_02170 PF04607 Region found in RelA / SpoT proteins AV541_02170 PF13291 ACT domain AV541_02180 PF00924 Mechanosensitive ion channel AV541_02190 PF01894 Uncharacterised protein family UPF0047 AV541_02235 PF03749 Sugar fermentation stimulation protein RE domain AV541_02235 PF17746 SfsA N-terminal OB domain AV541_02240 PF02535 ZIP Zinc transporter AV541_02255 PF01235 Sodium:alanine symporter family AV541_02265 PF04073 Aminoacyl-tRNA editing domain AV541_02265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV541_02265 PF03129 Anticodon binding domain AV541_02270 PF07687 Peptidase dimerisation domain AV541_02270 PF01546 Peptidase family M20/M25/M40 AV541_02280 PF00164 Ribosomal protein S12/S23 AV541_02285 PF00177 Ribosomal protein S7p/S5e AV541_02295 PF03143 Elongation factor Tu C-terminal domain AV541_02295 PF03144 Elongation factor Tu domain 2 AV541_02295 PF00009 Elongation factor Tu GTP binding domain AV541_02300 PF00338 Ribosomal protein S10p/S20e AV541_02305 PF00297 Ribosomal protein L3 AV541_02310 PF00573 Ribosomal protein L4/L1 family AV541_02315 PF00276 Ribosomal protein L23 AV541_02320 PF00181 Ribosomal Proteins L2, RNA binding domain AV541_02320 PF03947 Ribosomal Proteins L2, C-terminal domain AV541_02325 PF00203 Ribosomal protein S19 AV541_02330 PF00237 Ribosomal protein L22p/L17e AV541_02335 PF07650 KH domain AV541_02335 PF00189 Ribosomal protein S3, C-terminal domain AV541_02340 PF00252 Ribosomal protein L16p/L10e AV541_02345 PF00831 Ribosomal L29 protein AV541_02350 PF00366 Ribosomal protein S17 AV541_02355 PF00238 Ribosomal protein L14p/L23e AV541_02360 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AV541_02360 PF00467 KOW motif AV541_02365 PF00673 ribosomal L5P family C-terminus AV541_02365 PF00281 Ribosomal protein L5 AV541_02370 PF00253 Ribosomal protein S14p/S29e AV541_02375 PF00410 Ribosomal protein S8 AV541_02380 PF00347 Ribosomal protein L6 AV541_02385 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AV541_02390 PF03719 Ribosomal protein S5, C-terminal domain AV541_02390 PF00333 Ribosomal protein S5, N-terminal domain AV541_02395 PF00327 Ribosomal protein L30p/L7e AV541_02400 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AV541_02405 PF00344 SecY translocase AV541_02415 PF00557 Metallopeptidase family M24 AV541_02420 PF01176 Translation initiation factor 1A / IF-1 AV541_02425 PF00444 Ribosomal protein L36 AV541_02430 PF00416 Ribosomal protein S13/S18 AV541_02435 PF00411 Ribosomal protein S11 AV541_02440 PF00163 Ribosomal protein S4/S9 N-terminal domain AV541_02440 PF01479 S4 domain AV541_02445 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AV541_02445 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AV541_02445 PF01000 RNA polymerase Rpb3/RpoA insert domain AV541_02450 PF01196 Ribosomal protein L17 AV541_02480 PF06971 Putative DNA-binding protein N-terminus AV541_02480 PF02629 CoA binding domain AV541_02490 PF00348 Polyprenyl synthetase AV541_02495 PF01725 Ham1 family AV541_02510 PF00528 Binding-protein-dependent transport system inner membrane component AV541_02515 PF00528 Binding-protein-dependent transport system inner membrane component AV541_02535 PF03641 Possible lysine decarboxylase AV541_02540 PF01177 Asp/Glu/Hydantoin racemase AV541_02545 PF02772 S-adenosylmethionine synthetase, central domain AV541_02545 PF02773 S-adenosylmethionine synthetase, C-terminal domain AV541_02545 PF00438 S-adenosylmethionine synthetase, N-terminal domain AV541_02555 PF17944 Arginine decarboxylase C-terminal helical extension AV541_02555 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AV541_02555 PF17810 Arginine decarboxylase helical bundle domain AV541_02570 PF14572 Phosphoribosyl synthetase-associated domain AV541_02570 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AV541_02575 PF01321 Creatinase/Prolidase N-terminal domain AV541_02575 PF00557 Metallopeptidase family M24 AV541_02580 PF01521 Iron-sulphur cluster biosynthesis AV541_02590 PF00528 Binding-protein-dependent transport system inner membrane component AV541_02595 PF12911 N-terminal TM domain of oligopeptide transport permease C AV541_02595 PF00528 Binding-protein-dependent transport system inner membrane component AV541_02600 PF01416 tRNA pseudouridine synthase AV541_02610 PF00528 Binding-protein-dependent transport system inner membrane component AV541_02630 PF02566 OsmC-like protein AV541_02640 PF00753 Metallo-beta-lactamase superfamily AV541_02655 PF00011 Hsp20/alpha crystallin family AV541_02660 PF00155 Aminotransferase class I and II AV541_02665 PF02390 Putative methyltransferase AV541_02680 PF00919 Uncharacterized protein family UPF0004 AV541_02680 PF04055 Radical SAM superfamily AV541_02685 PF01230 HIT domain AV541_02700 PF00156 Phosphoribosyl transferase domain AV541_02710 PF13419 Haloacid dehalogenase-like hydrolase AV541_02715 PF01812 5-formyltetrahydrofolate cyclo-ligase family AV541_02735 PF02223 Thymidylate kinase AV541_02770 PF13662 Toprim domain AV541_02770 PF02132 RecR protein AV541_02775 PF02575 YbaB/EbfC DNA-binding family AV541_02780 PF00490 Delta-aminolevulinic acid dehydratase AV541_02815 PF14693 Ribosomal protein TL5, C-terminal domain AV541_02815 PF01386 Ribosomal L25p family AV541_02830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV541_02830 PF01751 Toprim domain AV541_02830 PF00986 DNA gyrase B subunit, carboxyl terminus AV541_02830 PF00204 DNA gyrase B AV541_02840 PF09573 TaqI restriction endonuclease AV541_02845 PF12950 TaqI-like C-terminal specificity domain AV541_02845 PF07669 Eco57I restriction-modification methylase AV541_02850 PF00155 Aminotransferase class I and II AV541_02875 PF01619 Proline dehydrogenase AV541_02885 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AV541_02885 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AV541_02910 PF01916 Deoxyhypusine synthase AV541_02920 PF02621 Menaquinone biosynthesis AV541_02925 PF13545 Crp-like helix-turn-helix domain AV541_02925 PF00027 Cyclic nucleotide-binding domain AV541_02935 PF08486 Stage II sporulation protein AV541_02950 PF00625 Guanylate kinase AV541_02955 PF01192 RNA polymerase Rpb6 AV541_02960 PF02441 Flavoprotein AV541_02960 PF04127 DNA / pantothenate metabolism flavoprotein AV541_02965 PF01316 Arginine repressor, DNA binding domain AV541_02965 PF02863 Arginine repressor, C-terminal domain AV541_02970 PF01914 MarC family integral membrane protein AV541_02980 PF00075 RNase H AV541_02990 PF08734 GYD domain AV541_03000 PF00958 GMP synthase C terminal domain AV541_03000 PF00117 Glutamine amidotransferase class-I AV541_03020 PF01048 Phosphorylase superfamily AV541_03025 PF14572 Phosphoribosyl synthetase-associated domain AV541_03025 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AV541_03040 PF03061 Thioesterase superfamily AV541_03075 PF01266 FAD dependent oxidoreductase AV541_03080 PF00180 Isocitrate/isopropylmalate dehydrogenase AV541_03100 PF01142 tRNA pseudouridine synthase D (TruD) AV541_03120 PF00107 Zinc-binding dehydrogenase AV541_03120 PF08240 Alcohol dehydrogenase GroES-like domain AV541_03170 PF01259 SAICAR synthetase AV541_03205 PF02627 Carboxymuconolactone decarboxylase family AV541_03215 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AV541_03215 PF01488 Shikimate / quinate 5-dehydrogenase AV541_03245 PF00072 Response regulator receiver domain AV541_03245 PF00486 Transcriptional regulatory protein, C terminal AV541_03250 PF03006 Haemolysin-III related AV541_03260 PF07726 ATPase family associated with various cellular activities (AAA) AV541_03260 PF17863 AAA lid domain AV541_03270 PF14464 Prokaryotic homologs of the JAB domain AV541_03275 PF00491 Arginase family AV541_03285 PF01343 Peptidase family S49 AV541_03290 PF10672 S-adenosylmethionine-dependent methyltransferase AV541_03290 PF17785 PUA-like domain AV541_03295 PF00004 ATPase family associated with various cellular activities (AAA) AV541_03295 PF01434 Peptidase family M41 AV541_03295 PF06480 FtsH Extracellular AV541_03295 PF17862 AAA+ lid domain AV541_03305 PF01025 GrpE AV541_03350 PF00578 AhpC/TSA family AV541_03350 PF10417 C-terminal domain of 1-Cys peroxiredoxin AV541_03360 PF00085 Thioredoxin AV541_03370 PF09123 Domain of unknown function (DUF1931) AV541_03380 PF02080 TrkA-C domain AV541_03385 PF00999 Sodium/hydrogen exchanger family AV541_03400 PF03448 MgtE intracellular N domain AV541_03400 PF01769 Divalent cation transporter AV541_03400 PF00571 CBS domain AV541_03410 PF01464 Transglycosylase SLT domain AV541_03420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV541_03425 PF01493 GXGXG motif AV541_03425 PF01645 Conserved region in glutamate synthase AV541_03425 PF04898 Glutamate synthase central domain AV541_03425 PF00310 Glutamine amidotransferases class-II AV541_03460 PF00117 Glutamine amidotransferase class-I AV541_03460 PF06418 CTP synthase N-terminus AV541_03465 PF00572 Ribosomal protein L13 AV541_03470 PF00380 Ribosomal protein S9/S16 AV541_03480 PF00156 Phosphoribosyl transferase domain AV541_03480 PF01738 Dienelactone hydrolase family AV541_03505 PF02675 S-adenosylmethionine decarboxylase AV541_03510 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AV541_03525 PF13085 2Fe-2S iron-sulfur cluster binding domain AV541_03535 PF01336 OB-fold nucleic acid binding domain AV541_03535 PF00152 tRNA synthetases class II (D, K and N) AV541_03550 PF01026 TatD related DNase AV541_03555 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AV541_03555 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AV541_03560 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AV541_03560 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AV541_03570 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AV541_03570 PF01502 Phosphoribosyl-AMP cyclohydrolase AV541_03575 PF00977 Histidine biosynthesis protein AV541_03600 PF04029 2-phosphosulpholactate phosphatase AV541_03605 PF13545 Crp-like helix-turn-helix domain AV541_03605 PF00027 Cyclic nucleotide-binding domain AV541_03615 PF01048 Phosphorylase superfamily AV541_03620 PF00378 Enoyl-CoA hydratase/isomerase AV541_03635 PF07311 Dodecin AV541_03640 PF13193 AMP-binding enzyme C-terminal domain AV541_03640 PF00501 AMP-binding enzyme AV541_03655 PF00580 UvrD/REP helicase N-terminal domain AV541_03655 PF13361 UvrD-like helicase C-terminal domain AV541_03675 PF00034 Cytochrome c AV541_03685 PF02683 Cytochrome C biogenesis protein transmembrane region AV541_03690 PF00005 ABC transporter AV541_03700 PF01578 Cytochrome C assembly protein AV541_03705 PF03100 CcmE AV541_03710 PF01578 Cytochrome C assembly protein AV541_03710 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AV541_03715 PF08534 Redoxin AV541_03745 PF01649 Ribosomal protein S20 AV541_03750 PF17070 30S ribosomal protein Thx AV541_03760 PF00288 GHMP kinases N terminal domain AV541_03760 PF08544 GHMP kinases C terminal AV541_03775 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AV541_03775 PF01926 50S ribosome-binding GTPase AV541_03790 PF01648 4'-phosphopantetheinyl transferase superfamily AV541_03800 PF01761 3-dehydroquinate synthase AV541_03805 PF01202 Shikimate kinase AV541_03810 PF01264 Chorismate synthase AV541_03815 PF03958 Bacterial type II/III secretion system short domain AV541_03815 PF00263 Bacterial type II and III secretion system protein AV541_03840 PF00180 Isocitrate/isopropylmalate dehydrogenase AV541_03850 PF00072 Response regulator receiver domain AV541_03870 PF03309 Type III pantothenate kinase AV541_03880 PF01520 N-acetylmuramoyl-L-alanine amidase AV541_03890 PF00069 Protein kinase domain AV541_03890 PF03793 PASTA domain AV541_03895 PF01734 Patatin-like phospholipase AV541_03900 PF10502 Signal peptidase, peptidase S26 AV541_03910 PF11870 Domain of unknown function (DUF3390) AV541_03910 PF13183 4Fe-4S dicluster domain AV541_03910 PF02589 LUD domain AV541_03915 PF02754 Cysteine-rich domain AV541_03935 PF00072 Response regulator receiver domain AV541_03935 PF00486 Transcriptional regulatory protein, C terminal AV541_03950 PF13545 Crp-like helix-turn-helix domain AV541_03950 PF00027 Cyclic nucleotide-binding domain AV541_03965 PF03091 CutA1 divalent ion tolerance protein AV541_03975 PF01220 Dehydroquinase class II AV541_03980 PF05958 tRNA (Uracil-5-)-methyltransferase AV541_03985 PF00196 Bacterial regulatory proteins, luxR family AV541_03985 PF00072 Response regulator receiver domain AV541_04000 PF00216 Bacterial DNA-binding protein AV541_04010 PF04493 Endonuclease V AV541_04030 PF00899 ThiF family AV541_04035 PF00285 Citrate synthase, C-terminal domain AV541_04045 PF00005 ABC transporter AV541_04045 PF00664 ABC transporter transmembrane region AV541_04050 PF08245 Mur ligase middle domain AV541_04065 PF00528 Binding-protein-dependent transport system inner membrane component AV541_04070 PF00005 ABC transporter AV541_04075 PF00005 ABC transporter AV541_04075 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV541_04085 PF02653 Branched-chain amino acid transport system / permease component AV541_04090 PF13458 Periplasmic binding protein AV541_04095 PF03951 Glutamine synthetase, beta-Grasp domain AV541_04095 PF00120 Glutamine synthetase, catalytic domain AV541_04100 PF02872 5'-nucleotidase, C-terminal domain AV541_04100 PF00149 Calcineurin-like phosphoesterase AV541_04110 PF08676 MutL C terminal dimerisation domain AV541_04110 PF01119 DNA mismatch repair protein, C-terminal domain AV541_04115 PF03737 Aldolase/RraA AV541_04120 PF01842 ACT domain AV541_04120 PF00551 Formyl transferase AV541_04125 PF13180 PDZ domain AV541_04125 PF17820 PDZ domain AV541_04140 PF16868 NMT1-like family AV541_04165 PF02350 UDP-N-acetylglucosamine 2-epimerase AV541_04170 PF00953 Glycosyl transferase family 4 AV541_04195 PF04055 Radical SAM superfamily AV541_04195 PF01938 TRAM domain AV541_04195 PF00919 Uncharacterized protein family UPF0004 AV541_04210 PF12804 MobA-like NTP transferase domain AV541_04215 PF00005 ABC transporter AV541_04230 PF02608 ABC transporter substrate-binding protein PnrA-like AV541_04235 PF00578 AhpC/TSA family AV541_04245 PF00133 tRNA synthetases class I (I, L, M and V) AV541_04245 PF09334 tRNA synthetases class I (M) AV541_04245 PF01588 Putative tRNA binding domain AV541_04250 PF01471 Putative peptidoglycan binding domain AV541_04250 PF17820 PDZ domain AV541_04250 PF03572 Peptidase family S41 AV541_04260 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AV541_04260 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AV541_04305 PF00069 Protein kinase domain AV541_04305 PF07238 PilZ domain AV541_04325 PF10672 S-adenosylmethionine-dependent methyltransferase AV541_04325 PF17785 PUA-like domain AV541_04335 PF01496 V-type ATPase 116kDa subunit family AV541_04335 PF18670 V-type ATPase subunit I, N-terminal domain AV541_04345 PF01991 ATP synthase (E/31 kDa) subunit AV541_04350 PF01992 ATP synthase (C/AC39) subunit AV541_04355 PF01990 ATP synthase (F/14-kDa) subunit AV541_04360 PF16886 ATPsynthase alpha/beta subunit N-term extension AV541_04360 PF02874 ATP synthase alpha/beta family, beta-barrel domain AV541_04360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV541_04365 PF02874 ATP synthase alpha/beta family, beta-barrel domain AV541_04365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV541_04370 PF01813 ATP synthase subunit D AV541_04390 PF05193 Peptidase M16 inactive domain AV541_04390 PF00675 Insulinase (Peptidase family M16) AV541_04395 PF05193 Peptidase M16 inactive domain AV541_04395 PF00675 Insulinase (Peptidase family M16) AV541_04405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV541_04405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV541_04410 PF02446 4-alpha-glucanotransferase AV541_04415 PF08275 DNA primase catalytic core, N-terminal domain AV541_04415 PF01807 CHC2 zinc finger AV541_04415 PF13662 Toprim domain AV541_04420 PF00211 Adenylate and Guanylate cyclase catalytic domain AV541_04420 PF16701 Adenylate cyclase regulatory domain AV541_04430 PF00270 DEAD/DEAH box helicase AV541_04430 PF09369 Domain of unknown function (DUF1998) AV541_04430 PF00271 Helicase conserved C-terminal domain AV541_04435 PF01906 Putative heavy-metal-binding AV541_04485 PF00872 Transposase, Mutator family AV541_04505 PF01638 HxlR-like helix-turn-helix AV541_04510 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AV541_04515 PF03776 Septum formation topological specificity factor MinE AV541_04525 PF00005 ABC transporter AV541_04525 PF08402 TOBE domain AV541_04530 PF00528 Binding-protein-dependent transport system inner membrane component AV541_04535 PF00528 Binding-protein-dependent transport system inner membrane component AV541_04540 PF13416 Bacterial extracellular solute-binding protein AV541_04555 PF00106 short chain dehydrogenase AV541_04575 PF00694 Aconitase C-terminal domain AV541_04585 PF05698 Bacterial trigger factor protein (TF) C-terminus AV541_04585 PF05697 Bacterial trigger factor protein (TF) AV541_04615 PF05685 Putative restriction endonuclease AV541_04665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV541_04665 PF00205 Thiamine pyrophosphate enzyme, central domain AV541_04665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV541_04670 PF10369 Small subunit of acetolactate synthase AV541_04675 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AV541_04675 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AV541_04680 PF08502 LeuA allosteric (dimerisation) domain AV541_04680 PF00682 HMGL-like AV541_04685 PF00682 HMGL-like AV541_04685 PF08502 LeuA allosteric (dimerisation) domain AV541_04700 PF00005 ABC transporter AV541_04750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AV541_04750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AV541_04760 PF01118 Semialdehyde dehydrogenase, NAD binding domain AV541_04760 PF02774 Semialdehyde dehydrogenase, dimerisation domain AV541_04765 PF01960 ArgJ family AV541_04810 PF02545 Maf-like protein AV541_04820 PF01791 DeoC/LacD family aldolase AV541_04825 PF06071 Protein of unknown function (DUF933) AV541_04825 PF01926 50S ribosome-binding GTPase AV541_04855 PF00588 SpoU rRNA Methylase family AV541_04860 PF07730 Histidine kinase AV541_04860 PF17200 Single Cache domain 2 AV541_04865 PF01451 Low molecular weight phosphotyrosine protein phosphatase AV541_04880 PF04227 Indigoidine synthase A like protein AV541_04885 PF13464 Domain of unknown function (DUF4115) AV541_04890 PF04055 Radical SAM superfamily AV541_04890 PF00919 Uncharacterized protein family UPF0004 AV541_04890 PF18693 TRAM domain AV541_04895 PF02254 TrkA-N domain AV541_04895 PF02080 TrkA-C domain AV541_04905 PF00343 Carbohydrate phosphorylase AV541_04905 PF11897 Protein of unknown function (DUF3417) AV541_04910 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV541_04915 PF00528 Binding-protein-dependent transport system inner membrane component AV541_04920 PF00133 tRNA synthetases class I (I, L, M and V) AV541_04920 PF08264 Anticodon-binding domain of tRNA AV541_04920 PF10458 Valyl tRNA synthetase tRNA binding arm AV541_04940 PF00977 Histidine biosynthesis protein AV541_04945 PF00218 Indole-3-glycerol phosphate synthase AV541_04955 PF12728 Helix-turn-helix domain AV541_04960 PF01734 Patatin-like phospholipase AV541_04970 PF00005 ABC transporter AV541_04980 PF16868 NMT1-like family AV541_04985 PF01053 Cys/Met metabolism PLP-dependent enzyme AV541_04990 PF13411 MerR HTH family regulatory protein AV541_05000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV541_05000 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV541_05000 PF00403 Heavy-metal-associated domain AV541_05005 PF02073 Thermophilic metalloprotease (M29) AV541_05020 PF03167 Uracil DNA glycosylase superfamily AV541_05025 PF01039 Carboxyl transferase domain AV541_05040 PF01012 Electron transfer flavoprotein domain AV541_05045 PF02770 Acyl-CoA dehydrogenase, middle domain AV541_05045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV541_05045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV541_05055 PF17770 Ribonuclease J C-terminal domain AV541_05055 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AV541_05055 PF12706 Beta-lactamase superfamily domain AV541_05060 PF00013 KH domain AV541_05060 PF00575 S1 RNA binding domain AV541_05060 PF01138 3' exoribonuclease family, domain 1 AV541_05060 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AV541_05060 PF03725 3' exoribonuclease family, domain 2 AV541_05065 PF00312 Ribosomal protein S15 AV541_05070 PF07690 Major Facilitator Superfamily AV541_05080 PF00115 Cytochrome C and Quinol oxidase polypeptide I AV541_05085 PF09125 Cytochrome C oxidase subunit II, transmembrane AV541_05085 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AV541_05090 PF08113 Cytochrome c oxidase subunit IIa family AV541_05095 PF00025 ADP-ribosylation factor family AV541_05110 PF00491 Arginase family AV541_05140 PF08207 Elongation factor P (EF-P) KOW-like domain AV541_05140 PF01132 Elongation factor P (EF-P) OB domain AV541_05140 PF09285 Elongation factor P, C-terminal AV541_05150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AV541_05150 PF00289 Biotin carboxylase, N-terminal domain AV541_05150 PF02785 Biotin carboxylase C-terminal domain AV541_05160 PF01029 NusB family AV541_05165 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AV541_05165 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AV541_05170 PF02681 Divergent PAP2 family AV541_05180 PF02754 Cysteine-rich domain AV541_05180 PF13183 4Fe-4S dicluster domain AV541_05195 PF00756 Putative esterase AV541_05200 PF00056 lactate/malate dehydrogenase, NAD binding domain AV541_05200 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AV541_05210 PF00004 ATPase family associated with various cellular activities (AAA) AV541_05210 PF05362 Lon protease (S16) C-terminal proteolytic domain AV541_05210 PF02190 ATP-dependent protease La (LON) substrate-binding domain AV541_05215 PF00534 Glycosyl transferases group 1 AV541_05215 PF13439 Glycosyltransferase Family 4 AV541_05240 PF01817 Chorismate mutase type II AV541_05240 PF01842 ACT domain AV541_05240 PF00800 Prephenate dehydratase AV541_05275 PF12826 Helix-hairpin-helix motif AV541_05275 PF01653 NAD-dependent DNA ligase adenylation domain AV541_05275 PF00533 BRCA1 C Terminus (BRCT) domain AV541_05275 PF03120 NAD-dependent DNA ligase OB-fold domain AV541_05280 PF02511 Thymidylate synthase complementing protein AV541_05285 PF00291 Pyridoxal-phosphate dependent enzyme AV541_05290 PF00290 Tryptophan synthase alpha chain AV541_05310 PF02075 Crossover junction endodeoxyribonuclease RuvC AV541_05315 PF12327 FtsZ family, C-terminal domain AV541_05315 PF00091 Tubulin/FtsZ family, GTPase domain AV541_05320 PF02491 SHS2 domain inserted in FTSA AV541_05330 PF01565 FAD binding domain AV541_05330 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AV541_05350 PF08245 Mur ligase middle domain AV541_05350 PF02875 Mur ligase family, glutamate ligase domain AV541_05355 PF00953 Glycosyl transferase family 4 AV541_05380 PF01795 MraW methylase family AV541_05400 PF01197 Ribosomal protein L31 AV541_05405 PF01008 Initiation factor 2 subunit family AV541_05415 PF01551 Peptidase family M23 AV541_05425 PF01321 Creatinase/Prolidase N-terminal domain AV541_05425 PF00557 Metallopeptidase family M24 AV541_05430 PF08264 Anticodon-binding domain of tRNA AV541_05430 PF00133 tRNA synthetases class I (I, L, M and V) AV541_05435 PF00923 Transaldolase/Fructose-6-phosphate aldolase AV541_05440 PF07498 Rho termination factor, N-terminal domain AV541_05440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV541_05440 PF07497 Rho termination factor, RNA-binding domain AV541_05445 PF01872 RibD C-terminal domain AV541_05445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AV541_05450 PF00677 Lumazine binding domain AV541_05455 PF00925 GTP cyclohydrolase II AV541_05455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AV541_05465 PF00571 CBS domain AV541_05465 PF01769 Divalent cation transporter AV541_05465 PF03448 MgtE intracellular N domain AV541_05470 PF03747 ADP-ribosylglycohydrolase AV541_05475 PF02547 Queuosine biosynthesis protein AV541_05485 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AV541_05485 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AV541_05485 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AV541_05485 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AV541_05495 PF01205 Uncharacterized protein family UPF0029 AV541_05510 PF12127 SigmaW regulon antibacterial AV541_05525 PF02130 Uncharacterized protein family UPF0054 AV541_05530 PF01219 Prokaryotic diacylglycerol kinase AV541_05540 PF01272 Transcription elongation factor, GreA/GreB, C-term AV541_05540 PF03449 Transcription elongation factor, N-terminal AV541_05545 PF01336 OB-fold nucleic acid binding domain AV541_05545 PF00152 tRNA synthetases class II (D, K and N) AV541_05550 PF16916 Dimerisation domain of Zinc Transporter AV541_05550 PF01545 Cation efflux family AV541_05560 PF02310 B12 binding domain AV541_05570 PF02978 Signal peptide binding domain AV541_05570 PF02881 SRP54-type protein, helical bundle domain AV541_05570 PF00448 SRP54-type protein, GTPase domain AV541_05575 PF00886 Ribosomal protein S16 AV541_05585 PF05239 PRC-barrel domain AV541_05585 PF01782 RimM N-terminal domain AV541_05595 PF01245 Ribosomal protein L19 AV541_05600 PF00072 Response regulator receiver domain AV541_05600 PF00196 Bacterial regulatory proteins, luxR family AV541_05610 PF00581 Rhodanese-like domain AV541_05635 PF00440 Bacterial regulatory proteins, tetR family AV541_05640 PF00005 ABC transporter AV541_05640 PF02687 FtsX-like permease family AV541_05640 PF12704 MacB-like periplasmic core domain AV541_05645 PF00005 ABC transporter AV541_05650 PF13533 Biotin-lipoyl like AV541_05670 PF00072 Response regulator receiver domain AV541_05670 PF00486 Transcriptional regulatory protein, C terminal AV541_05690 PF13089 Polyphosphate kinase N-terminal domain AV541_05690 PF17941 Polyphosphate kinase C-terminal domain 1 AV541_05690 PF02503 Polyphosphate kinase middle domain AV541_05690 PF13090 Polyphosphate kinase C-terminal domain 2 AV541_05695 PF00171 Aldehyde dehydrogenase family AV541_05710 PF00294 pfkB family carbohydrate kinase AV541_05725 PF01047 MarR family AV541_05740 PF00108 Thiolase, N-terminal domain AV541_05740 PF02803 Thiolase, C-terminal domain AV541_05755 PF02445 Quinolinate synthetase A protein AV541_05760 PF00890 FAD binding domain AV541_05760 PF02910 Fumarate reductase flavoprotein C-term AV541_05770 PF01638 HxlR-like helix-turn-helix AV541_05775 PF01950 Fructose-1,6-bisphosphatase AV541_05785 PF00528 Binding-protein-dependent transport system inner membrane component AV541_05795 PF00589 Phage integrase family AV541_05795 PF02899 Phage integrase, N-terminal SAM-like domain AV541_05800 PF17932 Tetracyclin repressor-like, C-terminal domain AV541_05800 PF00440 Bacterial regulatory proteins, tetR family AV541_05805 PF05138 Phenylacetic acid catabolic protein AV541_05835 PF03746 LamB/YcsF family AV541_05865 PF14535 AMP-binding enzyme C-terminal domain AV541_05865 PF00501 AMP-binding enzyme AV541_05870 PF03061 Thioesterase superfamily AV541_05880 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV541_05880 PF00005 ABC transporter AV541_05885 PF00005 ABC transporter AV541_05885 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV541_05890 PF02653 Branched-chain amino acid transport system / permease component AV541_05900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV541_05905 PF01613 Flavin reductase like domain AV541_05910 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AV541_05910 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AV541_05915 PF00171 Aldehyde dehydrogenase family AV541_05920 PF01557 Fumarylacetoacetate (FAA) hydrolase family AV541_05925 PF00701 Dihydrodipicolinate synthetase family AV541_05960 PF02645 Uncharacterised protein, DegV family COG1307 AV541_05965 PF02645 Uncharacterised protein, DegV family COG1307 AV541_05975 PF00487 Fatty acid desaturase AV541_05980 PF00121 Triosephosphate isomerase AV541_06000 PF01797 Transposase IS200 like AV541_06050 PF00005 ABC transporter AV541_06115 PF00893 Small Multidrug Resistance protein AV541_06120 PF00202 Aminotransferase class-III AV541_06125 PF03471 Transporter associated domain AV541_06125 PF00999 Sodium/hydrogen exchanger family AV541_06130 PF01926 50S ribosome-binding GTPase AV541_06130 PF12631 MnmE helical domain AV541_06130 PF10396 GTP-binding protein TrmE N-terminus AV541_06135 PF01808 AICARFT/IMPCHase bienzyme AV541_06135 PF02142 MGS-like domain AV541_06140 PF01467 Cytidylyltransferase-like AV541_06160 PF01121 Dephospho-CoA kinase AV541_06165 PF12627 Probable RNA and SrmB- binding site of polymerase A AV541_06165 PF01966 HD domain AV541_06165 PF01743 Poly A polymerase head domain AV541_06170 PF01875 Memo-like protein AV541_06175 PF17876 Cold shock domain AV541_06175 PF08206 Ribonuclease B OB domain AV541_06175 PF00773 RNB domain AV541_06175 PF00575 S1 RNA binding domain AV541_06190 PF02033 Ribosome-binding factor A AV541_06195 PF00162 Phosphoglycerate kinase AV541_06200 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AV541_06200 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AV541_06215 PF00583 Acetyltransferase (GNAT) family AV541_06215 PF00795 Carbon-nitrogen hydrolase AV541_06220 PF01668 SmpB protein AV541_06225 PF01520 N-acetylmuramoyl-L-alanine amidase AV541_06225 PF11741 AMIN domain AV541_06255 PF04298 Putative neutral zinc metallopeptidase AV541_06260 PF00582 Universal stress protein family AV541_06265 PF01430 Hsp33 protein AV541_06270 PF09190 DALR domain AV541_06270 PF01406 tRNA synthetases class I (C) catalytic domain AV541_06275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV541_06275 PF02770 Acyl-CoA dehydrogenase, middle domain AV541_06275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV541_06280 PF02803 Thiolase, C-terminal domain AV541_06280 PF00108 Thiolase, N-terminal domain AV541_06285 PF00378 Enoyl-CoA hydratase/isomerase AV541_06285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV541_06285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV541_06295 PF02645 Uncharacterised protein, DegV family COG1307 AV541_06300 PF01470 Pyroglutamyl peptidase AV541_06305 PF00534 Glycosyl transferases group 1 AV541_06305 PF13439 Glycosyltransferase Family 4 AV541_06315 PF13439 Glycosyltransferase Family 4 AV541_06315 PF00534 Glycosyl transferases group 1 AV541_06320 PF00535 Glycosyl transferase family 2 AV541_06340 PF04474 Protein of unknown function (DUF554) AV541_06345 PF02686 Glu-tRNAGln amidotransferase C subunit AV541_06350 PF02403 Seryl-tRNA synthetase N-terminal domain AV541_06350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV541_06355 PF13378 Enolase C-terminal domain-like AV541_06355 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AV541_06375 PF07736 Chorismate mutase type I AV541_06390 PF00171 Aldehyde dehydrogenase family AV541_06400 PF00293 NUDIX domain AV541_06415 PF00318 Ribosomal protein S2 AV541_06420 PF00889 Elongation factor TS AV541_06425 PF00696 Amino acid kinase family AV541_06430 PF01765 Ribosome recycling factor AV541_06440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AV541_06440 PF13288 DXP reductoisomerase C-terminal domain AV541_06440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AV541_06445 PF17820 PDZ domain AV541_06445 PF02163 Peptidase family M50 AV541_06450 PF00535 Glycosyl transferase family 2 AV541_06465 PF01029 NusB family AV541_06465 PF01189 16S rRNA methyltransferase RsmB/F AV541_06470 PF04232 Stage V sporulation protein S (SpoVS) AV541_06480 PF02631 RecX family AV541_06510 PF04293 SpoVR like protein AV541_06515 PF08534 Redoxin AV541_06520 PF00581 Rhodanese-like domain AV541_06530 PF00753 Metallo-beta-lactamase superfamily AV541_06535 PF00581 Rhodanese-like domain AV541_06545 PF01261 Xylose isomerase-like TIM barrel AV541_06550 PF02163 Peptidase family M50 AV541_06560 PF01743 Poly A polymerase head domain AV541_06560 PF12627 Probable RNA and SrmB- binding site of polymerase A AV541_06560 PF01966 HD domain AV541_06585 PF00571 CBS domain AV541_06600 PF09397 Ftsk gamma domain AV541_06600 PF17854 FtsK alpha domain AV541_06600 PF01580 FtsK/SpoIIIE family AV541_06615 PF13462 Thioredoxin AV541_06620 PF02254 TrkA-N domain AV541_06620 PF00999 Sodium/hydrogen exchanger family AV541_06625 PF01709 Transcriptional regulator AV541_06635 PF00474 Sodium:solute symporter family AV541_06655 PF01627 Hpt domain AV541_06655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV541_06655 PF00672 HAMP domain AV541_06655 PF00072 Response regulator receiver domain AV541_06655 PF17149 Periplasmic sensor domain found in signal transduction proteins AV541_06655 PF00512 His Kinase A (phospho-acceptor) domain AV541_06660 PF00072 Response regulator receiver domain AV541_06660 PF00486 Transcriptional regulatory protein, C terminal AV541_06670 PF02843 Phosphoribosylglycinamide synthetase, C domain AV541_06670 PF02844 Phosphoribosylglycinamide synthetase, N domain AV541_06670 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AV541_06685 PF01557 Fumarylacetoacetate (FAA) hydrolase family AV541_06690 PF02660 Glycerol-3-phosphate acyltransferase AV541_06695 PF00356 Bacterial regulatory proteins, lacI family AV541_06710 PF04055 Radical SAM superfamily AV541_06720 PF04264 YceI-like domain AV541_06725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV541_06730 PF18152 DAHP synthase ferredoxin-like domain AV541_06730 PF00793 DAHP synthetase I family AV541_06735 PF02153 Prephenate dehydrogenase AV541_06735 PF01842 ACT domain AV541_06780 PF00583 Acetyltransferase (GNAT) family AV541_06820 PF01925 Sulfite exporter TauE/SafE AV541_06830 PF00156 Phosphoribosyl transferase domain AV541_06835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AV541_06835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AV541_06840 PF01850 PIN domain AV541_06845 PF01979 Amidohydrolase family AV541_06855 PF01180 Dihydroorotate dehydrogenase AV541_06870 PF00005 ABC transporter AV541_06875 PF00528 Binding-protein-dependent transport system inner membrane component AV541_06880 PF02190 ATP-dependent protease La (LON) substrate-binding domain AV541_06880 PF00004 ATPase family associated with various cellular activities (AAA) AV541_06880 PF05362 Lon protease (S16) C-terminal proteolytic domain AV541_06890 PF05922 Peptidase inhibitor I9 AV541_06890 PF00082 Subtilase family AV541_06925 PF00561 alpha/beta hydrolase fold AV541_06940 PF13026 Protein of unknown function (DUF3887) AV541_06940 PF12146 Serine aminopeptidase, S33 AV541_06950 PF18357 Diphteria toxin repressor SH3 domain AV541_06950 PF02742 Iron dependent repressor, metal binding and dimerisation domain AV541_06950 PF01325 Iron dependent repressor, N-terminal DNA binding domain AV541_06960 PF00144 Beta-lactamase AV541_06980 PF00005 ABC transporter AV541_07000 PF00672 HAMP domain AV541_07000 PF00512 His Kinase A (phospho-acceptor) domain AV541_07000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV541_07005 PF01842 ACT domain AV541_07005 PF03315 Serine dehydratase beta chain AV541_07015 PF00701 Dihydrodipicolinate synthetase family AV541_07025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AV541_07030 PF00571 CBS domain AV541_07030 PF01595 Cyclin M transmembrane N-terminal domain AV541_07030 PF03471 Transporter associated domain AV541_07055 PF00873 AcrB/AcrD/AcrF family AV541_07070 PF00330 Aconitase family (aconitate hydratase) AV541_07070 PF00694 Aconitase C-terminal domain AV541_07085 PF00082 Subtilase family AV541_07115 PF03167 Uracil DNA glycosylase superfamily AV541_07125 PF00528 Binding-protein-dependent transport system inner membrane component AV541_07130 PF00005 ABC transporter AV541_07145 PF01336 OB-fold nucleic acid binding domain AV541_07145 PF02938 GAD domain AV541_07145 PF00152 tRNA synthetases class II (D, K and N) AV541_07160 PF00152 tRNA synthetases class II (D, K and N) AV541_07160 PF01336 OB-fold nucleic acid binding domain AV541_07165 PF01174 SNO glutamine amidotransferase family AV541_07170 PF00403 Heavy-metal-associated domain AV541_07175 PF01022 Bacterial regulatory protein, arsR family AV541_07180 PF01680 SOR/SNZ family AV541_07185 PF01464 Transglycosylase SLT domain AV541_07185 PF10145 Phage-related minor tail protein AV541_07185 PF01551 Peptidase family M23 AV541_07195 PF17384 RimP C-terminal SH3 domain AV541_07195 PF02576 RimP N-terminal domain AV541_07200 PF08529 NusA N-terminal domain AV541_07200 PF13184 NusA-like KH domain AV541_07200 PF00575 S1 RNA binding domain AV541_07210 PF04760 Translation initiation factor IF-2, N-terminal region AV541_07210 PF00009 Elongation factor Tu GTP binding domain AV541_07210 PF11987 Translation-initiation factor 2 AV541_07220 PF02355 Protein export membrane protein AV541_07220 PF07549 SecD/SecF GG Motif AV541_07230 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AV541_07230 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AV541_07255 PF08543 Phosphomethylpyrimidine kinase AV541_07260 PF07690 Major Facilitator Superfamily AV541_07270 PF01266 FAD dependent oxidoreductase AV541_07270 PF05690 Thiazole biosynthesis protein ThiG AV541_07280 PF02597 ThiS family AV541_07285 PF02581 Thiamine monophosphate synthase AV541_07295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AV541_07295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AV541_07300 PF02602 Uroporphyrinogen-III synthase HemD AV541_07305 PF10414 Sirohaem synthase dimerisation region AV541_07305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV541_07305 PF14824 Sirohaem biosynthesis protein central AV541_07310 PF01507 Phosphoadenosine phosphosulfate reductase family AV541_07315 PF01925 Sulfite exporter TauE/SafE AV541_07320 PF10414 Sirohaem synthase dimerisation region AV541_07320 PF14824 Sirohaem biosynthesis protein central AV541_07320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV541_07330 PF00296 Luciferase-like monooxygenase AV541_07335 PF00107 Zinc-binding dehydrogenase AV541_07335 PF08240 Alcohol dehydrogenase GroES-like domain AV541_07340 PF02423 Ornithine cyclodeaminase/mu-crystallin family AV541_07355 PF04452 RNA methyltransferase AV541_07370 PF01883 Iron-sulfur cluster assembly protein AV541_07370 PF10609 NUBPL iron-transfer P-loop NTPase AV541_07400 PF03275 UDP-galactopyranose mutase AV541_07435 PF01909 Nucleotidyltransferase domain AV541_07435 PF01966 HD domain AV541_07435 PF08335 GlnD PII-uridylyltransferase AV541_07475 PF00227 Proteasome subunit AV541_07515 PF01741 Large-conductance mechanosensitive channel, MscL AV541_07520 PF00311 Phosphoenolpyruvate carboxylase AV541_07540 PF01272 Transcription elongation factor, GreA/GreB, C-term AV541_07540 PF03449 Transcription elongation factor, N-terminal AV541_07550 PF04715 Anthranilate synthase component I, N terminal region AV541_07550 PF00425 chorismate binding enzyme AV541_07555 PF02310 B12 binding domain AV541_07555 PF02607 B12 binding domain AV541_07555 PF02965 Vitamin B12 dependent methionine synthase, activation domain AV541_07555 PF00809 Pterin binding enzyme AV541_07555 PF02574 Homocysteine S-methyltransferase AV541_07570 PF00574 Clp protease AV541_07575 PF05698 Bacterial trigger factor protein (TF) C-terminus AV541_07575 PF05697 Bacterial trigger factor protein (TF) AV541_07600 PF06153 Cyclic-di-AMP receptor AV541_07610 PF08704 tRNA methyltransferase complex GCD14 subunit AV541_07620 PF04055 Radical SAM superfamily AV541_07620 PF06968 Biotin and Thiamin Synthesis associated domain AV541_07625 PF02261 Aspartate decarboxylase AV541_07635 PF00440 Bacterial regulatory proteins, tetR family AV541_07635 PF17932 Tetracyclin repressor-like, C-terminal domain AV541_07645 PF01575 MaoC like domain AV541_07645 PF00171 Aldehyde dehydrogenase family AV541_07650 PF13193 AMP-binding enzyme C-terminal domain AV541_07650 PF00501 AMP-binding enzyme AV541_07670 PF01208 Uroporphyrinogen decarboxylase (URO-D) AV541_07675 PF00762 Ferrochelatase AV541_07695 PF01297 Zinc-uptake complex component A periplasmic AV541_07700 PF10509 Galactokinase galactose-binding signature AV541_07700 PF08544 GHMP kinases C terminal AV541_07700 PF00288 GHMP kinases N terminal domain AV541_07710 PF00582 Universal stress protein family AV541_07715 PF01699 Sodium/calcium exchanger protein AV541_07720 PF00571 CBS domain AV541_07720 PF00478 IMP dehydrogenase / GMP reductase domain AV541_07725 PF00689 Cation transporting ATPase, C-terminus AV541_07725 PF00690 Cation transporter/ATPase, N-terminus AV541_07745 PF13458 Periplasmic binding protein AV541_07760 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV541_07760 PF00005 ABC transporter AV541_07845 PF00107 Zinc-binding dehydrogenase AV541_07845 PF08240 Alcohol dehydrogenase GroES-like domain AV541_07855 PF00708 Acylphosphatase AV541_07860 PF01926 50S ribosome-binding GTPase AV541_07860 PF16360 GTP-binding GTPase Middle Region AV541_07860 PF13167 GTP-binding GTPase N-terminal AV541_07875 PF01168 Alanine racemase, N-terminal domain AV541_07880 PF01048 Phosphorylase superfamily AV541_07900 PF10415 Fumarase C C-terminus AV541_07900 PF00206 Lyase AV541_07910 PF01048 Phosphorylase superfamily AV541_07925 PF00453 Ribosomal protein L20 AV541_07930 PF01632 Ribosomal protein L35 AV541_07945 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AV541_07945 PF00749 tRNA synthetases class I (E and Q), catalytic domain AV541_07960 PF01728 FtsJ-like methyltransferase AV541_07960 PF01479 S4 domain AV541_07965 PF02774 Semialdehyde dehydrogenase, dimerisation domain AV541_07965 PF01118 Semialdehyde dehydrogenase, NAD binding domain AV541_07975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV541_07975 PF03129 Anticodon binding domain AV541_07980 PF00004 ATPase family associated with various cellular activities (AAA) AV541_07980 PF07724 AAA domain (Cdc48 subfamily) AV541_07980 PF17871 AAA lid domain AV541_07980 PF02861 Clp amino terminal domain, pathogenicity island component AV541_07980 PF10431 C-terminal, D2-small domain, of ClpB protein AV541_07985 PF18073 Rubredoxin metal binding domain AV541_07995 PF01861 Branched-chain polyamine synthase A C-terminal domain AV541_08000 PF00549 CoA-ligase AV541_08000 PF08442 ATP-grasp domain AV541_08020 PF01842 ACT domain AV541_08020 PF00696 Amino acid kinase family AV541_08020 PF13840 ACT domain AV541_08030 PF04542 Sigma-70 region 2 AV541_08030 PF04539 Sigma-70 region 3 AV541_08030 PF04545 Sigma-70, region 4 AV541_08030 PF00140 Sigma-70 factor, region 1.2 AV541_08045 PF01979 Amidohydrolase family AV541_08055 PF00293 NUDIX domain AV541_08065 PF02347 Glycine cleavage system P-protein AV541_08070 PF02347 Glycine cleavage system P-protein AV541_08075 PF01597 Glycine cleavage H-protein AV541_08100 PF01883 Iron-sulfur cluster assembly protein AV541_08105 PF03741 Integral membrane protein TerC family AV541_08130 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AV541_08130 PF02222 ATP-grasp domain AV541_08145 PF01588 Putative tRNA binding domain AV541_08150 PF13358 DDE superfamily endonuclease AV541_08165 PF13411 MerR HTH family regulatory protein AV541_08170 PF09339 IclR helix-turn-helix domain AV541_08170 PF01614 Bacterial transcriptional regulator AV541_08175 PF01274 Malate synthase AV541_08190 PF02754 Cysteine-rich domain AV541_08190 PF13183 4Fe-4S dicluster domain AV541_08205 PF04055 Radical SAM superfamily AV541_08205 PF06969 HemN C-terminal domain AV541_08215 PF11497 NADH-quinone oxidoreductase chain 15 AV541_08275 PF08331 Domain of unknown function (DUF1730) AV541_08295 PF01209 ubiE/COQ5 methyltransferase family AV541_08315 PF00982 Glycosyltransferase family 20 AV541_08320 PF03632 Glycosyl hydrolase family 65 central catalytic domain AV541_08320 PF02358 Trehalose-phosphatase AV541_08320 PF03636 Glycosyl hydrolase family 65, N-terminal domain AV541_08320 PF03633 Glycosyl hydrolase family 65, C-terminal domain AV541_08335 PF02597 ThiS family AV541_08345 PF00571 CBS domain AV541_08350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AV541_08350 PF00005 ABC transporter AV541_08370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AV541_08375 PF00107 Zinc-binding dehydrogenase AV541_08375 PF08240 Alcohol dehydrogenase GroES-like domain AV541_08380 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV541_08425 PF02224 Cytidylate kinase AV541_08430 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AV541_08435 PF00266 Aminotransferase class-V AV541_08445 PF00950 ABC 3 transport family AV541_08450 PF00005 ABC transporter AV541_08475 PF00468 Ribosomal protein L34 AV541_08480 PF00825 Ribonuclease P AV541_08485 PF01809 Putative membrane protein insertion efficiency factor AV541_08500 PF05175 Methyltransferase small domain AV541_08500 PF17827 PrmC N-terminal domain AV541_08510 PF00005 ABC transporter AV541_08525 PF00448 SRP54-type protein, GTPase domain AV541_08525 PF02881 SRP54-type protein, helical bundle domain AV541_08530 PF02600 Disulfide bond formation protein DsbB AV541_08555 PF00117 Glutamine amidotransferase class-I AV541_08560 PF00475 Imidazoleglycerol-phosphate dehydratase AV541_08565 PF00155 Aminotransferase class I and II AV541_08570 PF00881 Nitroreductase family AV541_08610 PF01783 Ribosomal L32p protein family AV541_08615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AV541_08615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AV541_08630 PF00550 Phosphopantetheine attachment site AV541_08640 PF01966 HD domain AV541_08640 PF13286 Phosphohydrolase-associated domain AV541_08645 PF00155 Aminotransferase class I and II AV541_08655 PF01555 DNA methylase AV541_08665 PF02548 Ketopantoate hydroxymethyltransferase AV541_08670 PF05491 RuvB C-terminal winged helix domain AV541_08670 PF17864 RuvB AAA lid domain AV541_08670 PF05496 Holliday junction DNA helicase RuvB P-loop domain AV541_08680 PF01434 Peptidase family M41 AV541_08680 PF17862 AAA+ lid domain AV541_08680 PF00004 ATPase family associated with various cellular activities (AAA) AV541_08680 PF06480 FtsH Extracellular AV541_08735 PF00890 FAD binding domain AV541_08745 PF01817 Chorismate mutase type II AV541_08745 PF00793 DAHP synthetase I family AV541_08750 PF00902 Sec-independent protein translocase protein (TatC) AV541_08760 PF00132 Bacterial transferase hexapeptide (six repeats) AV541_08760 PF12804 MobA-like NTP transferase domain AV541_08760 PF14602 Hexapeptide repeat of succinyl-transferase AV541_08765 PF01790 Prolipoprotein diacylglyceryl transferase AV541_08805 PF00814 Glycoprotease family AV541_08810 PF02525 Flavodoxin-like fold AV541_08815 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AV541_08820 PF02021 Uncharacterised protein family UPF0102 AV541_08825 PF03793 PASTA domain AV541_08825 PF00069 Protein kinase domain AV541_08830 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV541_08855 PF04055 Radical SAM superfamily AV541_08855 PF06463 Molybdenum Cofactor Synthesis C AV541_08880 PF02401 LytB protein AV541_08900 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AV541_08905 PF00486 Transcriptional regulatory protein, C terminal AV541_08905 PF00072 Response regulator receiver domain AV541_08915 PF00483 Nucleotidyl transferase AV541_08920 PF05362 Lon protease (S16) C-terminal proteolytic domain AV541_08920 PF13654 AAA domain AV541_08925 PF01804 Penicillin amidase AV541_08940 PF00248 Aldo/keto reductase family AV541_08985 PF15937 prlF antitoxin for toxin YhaV_toxin AV541_09025 PF00830 Ribosomal L28 family AV541_09045 PF08780 Nucleotidyltransferase substrate binding protein like AV541_09065 PF00850 Histone deacetylase domain AV541_09075 PF00588 SpoU rRNA Methylase family AV541_09080 PF00270 DEAD/DEAH box helicase AV541_09080 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AV541_09080 PF17191 RecG wedge domain AV541_09085 PF00909 Ammonium Transporter Family AV541_09090 PF00543 Nitrogen regulatory protein P-II AV541_09095 PF01628 HrcA protein C terminal domain AV541_09100 PF02391 MoaE protein AV541_09175 PF01396 Topoisomerase DNA binding C4 zinc finger AV541_09175 PF01131 DNA topoisomerase AV541_09175 PF01751 Toprim domain AV541_09190 PF00459 Inositol monophosphatase family AV541_09220 PF04098 Rad52/22 family double-strand break repair protein AV541_09230 PF00398 Ribosomal RNA adenine dimethylase AV541_09235 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AV541_09240 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AV541_09245 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AV541_09260 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AV541_09260 PF10531 SLBB domain AV541_09260 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AV541_09270 PF00146 NADH dehydrogenase AV541_09275 PF12838 4Fe-4S dicluster domain AV541_09280 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AV541_09285 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AV541_09300 PF00361 Proton-conducting membrane transporter AV541_09305 PF03485 Arginyl tRNA synthetase N terminal domain AV541_09305 PF05746 DALR anticodon binding domain AV541_09305 PF00750 tRNA synthetases class I (R) AV541_09310 PF13180 PDZ domain AV541_09315 PF08245 Mur ligase middle domain AV541_09315 PF02875 Mur ligase family, glutamate ligase domain AV541_09315 PF01225 Mur ligase family, catalytic domain AV541_09335 PF03060 Nitronate monooxygenase AV541_09365 PF00834 Ribulose-phosphate 3 epimerase family AV541_09370 PF02779 Transketolase, pyrimidine binding domain AV541_09370 PF00456 Transketolase, thiamine diphosphate binding domain AV541_09370 PF02780 Transketolase, C-terminal domain AV541_09380 PF00589 Phage integrase family AV541_09380 PF14659 Phage integrase, N-terminal SAM-like domain AV541_09395 PF18273 Type III R-M EcoP15I C-terminal domain AV541_09395 PF01555 DNA methylase AV541_09450 PF00271 Helicase conserved C-terminal domain AV541_09450 PF00270 DEAD/DEAH box helicase AV541_09465 PF10576 Iron-sulfur binding domain of endonuclease III AV541_09465 PF00730 HhH-GPD superfamily base excision DNA repair protein AV541_09465 PF00633 Helix-hairpin-helix motif AV541_09475 PF00005 ABC transporter AV541_09505 PF01676 Metalloenzyme superfamily AV541_09505 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase AV541_09510 PF02272 DHHA1 domain AV541_09510 PF01368 DHH family AV541_09515 PF00589 Phage integrase family AV541_09530 PF12728 Helix-turn-helix domain AV541_09585 PF11741 AMIN domain AV541_09585 PF01520 N-acetylmuramoyl-L-alanine amidase AV541_09685 PF00132 Bacterial transferase hexapeptide (six repeats) AV541_09685 PF14602 Hexapeptide repeat of succinyl-transferase AV541_09685 PF12464 Maltose acetyltransferase AV541_09690 PF07650 KH domain AV541_09690 PF01926 50S ribosome-binding GTPase AV541_09695 PF17782 DprA winged helix domain AV541_09695 PF02481 DNA recombination-mediator protein A AV541_09700 PF05067 Manganese containing catalase AV541_09710 PF01063 Amino-transferase class IV AV541_09725 PF12105 SpoU, rRNA methylase, C-terminal AV541_09725 PF00588 SpoU rRNA Methylase family AV541_09730 PF01634 ATP phosphoribosyltransferase AV541_09740 PF00692 dUTPase AV541_09750 PF00583 Acetyltransferase (GNAT) family AV541_09755 PF01661 Macro domain AV541_09765 PF03477 ATP cone domain AV541_09785 PF01042 Endoribonuclease L-PSP AV541_09800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AV541_09810 PF00472 RF-1 domain AV541_09810 PF03462 PCRF domain AV541_09815 PF01895 PhoU domain AV541_09820 PF00512 His Kinase A (phospho-acceptor) domain AV541_09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV541_09825 PF00072 Response regulator receiver domain AV541_09825 PF00486 Transcriptional regulatory protein, C terminal AV541_09830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AV541_09830 PF01411 tRNA synthetases class II (A) AV541_09830 PF02272 DHHA1 domain AV541_09835 PF00849 RNA pseudouridylate synthase AV541_09835 PF01479 S4 domain AV541_09860 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain AV541_09860 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AV541_09865 PF00294 pfkB family carbohydrate kinase AV541_09870 PF08240 Alcohol dehydrogenase GroES-like domain AV541_09870 PF00107 Zinc-binding dehydrogenase AV541_09875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AV541_09900 PF00575 S1 RNA binding domain AV541_09910 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AV541_09925 PF03575 Peptidase family S51 AV541_09930 PF00440 Bacterial regulatory proteins, tetR family AV541_09930 PF08359 YsiA-like protein, C-terminal region AV541_09945 PF00288 GHMP kinases N terminal domain AV541_09945 PF08544 GHMP kinases C terminal AV541_09950 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AV541_09955 PF02673 Bacitracin resistance protein BacA AV541_09965 PF00226 DnaJ domain AV541_09965 PF01556 DnaJ C terminal domain AV541_09965 PF00684 DnaJ central domain AV541_09970 PF00313 'Cold-shock' DNA-binding domain AV541_10010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AV541_10010 PF00364 Biotin-requiring enzyme AV541_10010 PF02817 e3 binding domain AV541_10020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV541_10020 PF03466 LysR substrate binding domain AV541_10030 PF00334 Nucleoside diphosphate kinase AV541_10040 PF02152 Dihydroneopterin aldolase AV541_10045 PF00809 Pterin binding enzyme AV541_10070 PF03480 Bacterial extracellular solute-binding protein, family 7 AV541_10105 PF13335 Magnesium chelatase, subunit ChlI C-terminal AV541_10105 PF01078 Magnesium chelatase, subunit ChlI AV541_10125 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AV541_10125 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AV541_10130 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AV541_10135 PF02233 NAD(P) transhydrogenase beta subunit AV541_10140 PF00466 Ribosomal protein L10 AV541_10145 PF00542 Ribosomal protein L7/L12 C-terminal domain AV541_10145 PF16320 Ribosomal protein L7/L12 dimerisation domain AV541_10155 PF07501 G5 domain AV541_10155 PF06725 3D domain AV541_10155 PF03990 G5-linked-Ubiquitin-like domain AV541_10165 PF13684 Dihydroxyacetone kinase family AV541_10165 PF02734 DAK2 domain AV541_10175 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AV541_10175 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AV541_10185 PF00378 Enoyl-CoA hydratase/isomerase AV541_10205 PF00709 Adenylosuccinate synthetase AV541_10260 PF00356 Bacterial regulatory proteins, lacI family AV541_10275 PF03009 Glycerophosphoryl diester phosphodiesterase family AV541_10280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AV541_10280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AV541_10360 PF13358 DDE superfamily endonuclease AV541_10385 PF12320 Type 5 capsule protein repressor C-terminal domain AV541_10385 PF00149 Calcineurin-like phosphoesterase AV541_10390 PF13476 AAA domain AV541_10425 PF03992 Antibiotic biosynthesis monooxygenase AV541_10470 PF01548 Transposase AV541_10470 PF02371 Transposase IS116/IS110/IS902 family AV541_10475 PF00872 Transposase, Mutator family AV541_10530 PF01548 Transposase AV541_10530 PF02371 Transposase IS116/IS110/IS902 family AV541_10540 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AV541_10540 PF12557 Cob(I)alamin adenosyltransferase N terminal AV541_10565 PF00300 Histidine phosphatase superfamily (branch 1) AV541_10570 PF03824 High-affinity nickel-transport protein AV541_10575 PF01888 CbiD AV541_10580 PF02570 Precorrin-8X methylmutase AV541_10585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV541_10590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV541_10600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV541_10600 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AV541_10605 PF11761 Cobalamin biosynthesis central region AV541_10605 PF01890 Cobalamin synthesis G C-terminus AV541_10605 PF11760 Cobalamin synthesis G N-terminal AV541_10610 PF01903 CbiX AV541_10620 PF14824 Sirohaem biosynthesis protein central AV541_10620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV541_10620 PF10414 Sirohaem synthase dimerisation region AV541_10625 PF00881 Nitroreductase family AV541_10630 PF03186 CobD/Cbib protein AV541_10645 PF00155 Aminotransferase class I and II AV541_10660 PF00245 Alkaline phosphatase AV541_10665 PF01979 Amidohydrolase family AV541_10700 PF13411 MerR HTH family regulatory protein AV541_10700 PF02607 B12 binding domain AV541_10705 PF00027 Cyclic nucleotide-binding domain AV541_10705 PF13545 Crp-like helix-turn-helix domain AV541_10710 PF05368 NmrA-like family AV541_10730 PF12706 Beta-lactamase superfamily domain AV541_10735 PF00232 Glycosyl hydrolase family 1 AV541_10775 PF01850 PIN domain AV541_10805 PF02195 ParB-like nuclease domain AV541_10810 PF13614 AAA domain AV541_10820 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AV541_10820 PF00384 Molybdopterin oxidoreductase AV541_10820 PF01568 Molydopterin dinucleotide binding domain AV541_10820 PF10518 TAT (twin-arginine translocation) pathway signal sequence AV541_10845 PF01814 Hemerythrin HHE cation binding domain AV541_10845 PF04405 Domain of Unknown function (DUF542) AV541_10885 PF00034 Cytochrome c AV541_10920 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV541_10940 PF13545 Crp-like helix-turn-helix domain AV541_10940 PF00027 Cyclic nucleotide-binding domain AV541_10955 PF01568 Molydopterin dinucleotide binding domain AV541_10955 PF00384 Molybdopterin oxidoreductase AV541_10955 PF14710 Respiratory nitrate reductase alpha N-terminal