AV541_00040 SM00861 Transketolase, pyrimidine binding domain AV541_00075 SM00966 SpoVT / AbrB like domain AV541_00115 SM00822 AV541_00115 AV541_00155 SM00649 Ribosomal protein L11/L12 AV541_00160 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AV541_00160 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AV541_00200 SM00849 Metallo-beta-lactamase superfamily AV541_00200 SM01027 Beta-Casp domain AV541_00250 SM00382 ATPases associated with a variety of cellular activities AV541_00270 SM00257 Lysin motif AV541_00300 SM00883 Chaperonin 10 Kd subunit AV541_00305 SM00967 RNA 2'-O ribose methyltransferase substrate binding AV541_00310 SM00881 CoA binding domain AV541_00320 SM00382 ATPases associated with a variety of cellular activities AV541_00400 SM00861 Transketolase, pyrimidine binding domain AV541_00410 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AV541_00435 SM00967 RNA 2'-O ribose methyltransferase substrate binding AV541_00630 SM00478 endonuclease III AV541_00640 SM00481 DNA polymerase alpha chain like domain AV541_00730 SM00116 Domain in cystathionine beta-synthase and other proteins. AV541_00785 SM00357 Cold shock protein domain AV541_00810 SM00382 ATPases associated with a variety of cellular activities AV541_00815 SM00845 GatB domain AV541_00825 SM00855 Phosphoglycerate mutase family AV541_00880 SM00849 Metallo-beta-lactamase superfamily AV541_00910 SM00480 DNA polymerase III beta subunit AV541_00915 SM00382 ATPases associated with a variety of cellular activities AV541_00915 SM00760 Bacterial dnaA protein helix-turn-helix domain AV541_00945 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AV541_01075 SM00937 AV541_01075 AV541_01135 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AV541_01165 SM00382 ATPases associated with a variety of cellular activities AV541_01265 SM00859 Semialdehyde dehydrogenase, NAD binding domain AV541_01290 SM00881 CoA binding domain AV541_01320 SM00487 DEAD-like helicases superfamily AV541_01320 SM00490 helicase superfamily c-terminal domain AV541_01340 SM00382 ATPases associated with a variety of cellular activities AV541_01370 SM00382 ATPases associated with a variety of cellular activities AV541_01410 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AV541_01450 SM00903 Flavin reductase like domain AV541_01475 SM00226 Low molecular weight phosphatase family AV541_01550 SM00382 ATPases associated with a variety of cellular activities AV541_01565 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AV541_01575 SM00732 Likely ribonuclease with RNase H fold. AV541_01600 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AV541_01620 SM00852 Probable molybdopterin binding domain AV541_01630 SM00382 ATPases associated with a variety of cellular activities AV541_01635 SM00322 K homology RNA-binding domain AV541_01635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV541_01660 SM00663 RNA polymerase I subunit A N-terminus AV541_01690 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AV541_01690 SM01232 AV541_01690 AV541_01735 SM00851 MGS-like domain AV541_01855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV541_01895 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AV541_02050 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AV541_02140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AV541_02140 SM00387 Histidine kinase-like ATPases AV541_02140 SM00388 His Kinase A (phosphoacceptor) domain AV541_02145 SM00448 cheY-homologous receiver domain AV541_02145 SM00862 Transcriptional regulatory protein, C terminal AV541_02170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV541_02170 SM00954 Region found in RelA / SpoT proteins AV541_02300 SM01403 AV541_02300 AV541_02320 SM01382 AV541_02320 AV541_02320 SM01383 AV541_02320 AV541_02335 SM00322 K homology RNA-binding domain AV541_02355 SM01374 AV541_02355 AV541_02360 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AV541_02440 SM00363 S4 RNA-binding domain AV541_02440 SM01390 AV541_02440 AV541_02445 SM00662 RNA polymerases D AV541_02470 SM00028 Tetratricopeptide repeats AV541_02480 SM00881 CoA binding domain AV541_02570 SM01400 AV541_02570 AV541_02640 SM00849 Metallo-beta-lactamase superfamily AV541_02645 SM00450 Rhodanese Homology Domain AV541_02680 SM00729 Elongator protein 3, MiaB family, Radical SAM AV541_02720 SM00834 Putative regulatory protein AV541_02755 SM00960 Roadblock/LC7 domain AV541_02760 SM00960 Roadblock/LC7 domain AV541_02770 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AV541_02770 SM00493 AV541_02770 AV541_02780 SM01004 Delta-aminolevulinic acid dehydratase AV541_02795 SM00331 Sigma factor PP2C-like phosphatases AV541_02795 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AV541_02830 SM00387 Histidine kinase-like ATPases AV541_02830 SM00433 TopoisomeraseII AV541_02885 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AV541_02925 SM00100 Cyclic nucleotide-monophosphate binding domain AV541_02925 SM00419 helix_turn_helix, cAMP Regulatory protein AV541_02950 SM00072 Guanylate kinase homologues. AV541_02955 SM01409 AV541_02955 AV541_03025 SM01400 AV541_03025 AV541_03080 SM01329 AV541_03080 AV541_03120 SM00829 Enoylreductase AV541_03160 SM01211 AV541_03160 AV541_03245 SM00448 cheY-homologous receiver domain AV541_03245 SM00862 Transcriptional regulatory protein, C terminal AV541_03260 SM00382 ATPases associated with a variety of cellular activities AV541_03270 SM00232 JAB/MPN domain AV541_03295 SM00382 ATPases associated with a variety of cellular activities AV541_03400 SM00116 Domain in cystathionine beta-synthase and other proteins. AV541_03455 SM00382 ATPases associated with a variety of cellular activities AV541_03560 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AV541_03560 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AV541_03605 SM00100 Cyclic nucleotide-monophosphate binding domain AV541_03605 SM00419 helix_turn_helix, cAMP Regulatory protein AV541_03645 SM00849 Metallo-beta-lactamase superfamily AV541_03690 SM00382 ATPases associated with a variety of cellular activities AV541_03780 SM00563 Phosphate acyltransferases AV541_03840 SM01329 AV541_03840 AV541_03850 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV541_03880 SM00646 AV541_03880 AV541_03890 SM00220 Serine/Threonine protein kinases, catalytic domain AV541_03935 SM00448 cheY-homologous receiver domain AV541_03935 SM00862 Transcriptional regulatory protein, C terminal AV541_03950 SM00419 helix_turn_helix, cAMP Regulatory protein AV541_03985 SM00421 helix_turn_helix, Lux Regulon AV541_03985 SM00448 cheY-homologous receiver domain AV541_04000 SM00411 bacterial (prokaryotic) histone like domain AV541_04005 SM00563 Phosphate acyltransferases AV541_04045 SM00382 ATPases associated with a variety of cellular activities AV541_04070 SM00382 ATPases associated with a variety of cellular activities AV541_04075 SM00382 ATPases associated with a variety of cellular activities AV541_04095 SM01230 AV541_04095 AV541_04110 SM00387 Histidine kinase-like ATPases AV541_04110 SM00853 MutL C terminal dimerisation domain AV541_04110 SM01340 AV541_04110 AV541_04125 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AV541_04185 SM00729 Elongator protein 3, MiaB family, Radical SAM AV541_04190 SM00704 CDGSH-type zinc finger. Function unknown. AV541_04195 SM00729 Elongator protein 3, MiaB family, Radical SAM AV541_04215 SM00382 ATPases associated with a variety of cellular activities AV541_04250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AV541_04250 SM00245 tail specific protease AV541_04305 SM00220 Serine/Threonine protein kinases, catalytic domain AV541_04310 SM00849 Metallo-beta-lactamase superfamily AV541_04415 SM00400 zinc finger AV541_04415 SM00493 AV541_04415 AV541_04430 SM00487 DEAD-like helicases superfamily AV541_04430 SM00490 helicase superfamily c-terminal domain AV541_04525 SM00382 ATPases associated with a variety of cellular activities AV541_04555 SM00822 AV541_04555 AV541_04680 SM00917 LeuA allosteric (dimerisation) domain AV541_04685 SM00917 LeuA allosteric (dimerisation) domain AV541_04700 SM00382 ATPases associated with a variety of cellular activities AV541_04760 SM00859 Semialdehyde dehydrogenase, NAD binding domain AV541_04815 SM00155 Phospholipase D. Active site motifs. AV541_04820 SM01133 AV541_04820 AV541_04860 SM00387 Histidine kinase-like ATPases AV541_04865 SM00226 Low molecular weight phosphatase family AV541_04890 SM00729 Elongator protein 3, MiaB family, Radical SAM AV541_04910 SM00062 Bacterial periplasmic substrate-binding proteins AV541_04910 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AV541_04970 SM00382 ATPases associated with a variety of cellular activities AV541_04990 SM00422 helix_turn_helix, mercury resistance AV541_05020 SM00986 Uracil DNA glycosylase superfamily AV541_05020 SM00987 UreE urease accessory protein, C-terminal domain AV541_05040 SM00893 Electron transfer flavoprotein domain AV541_05055 SM00849 Metallo-beta-lactamase superfamily AV541_05060 SM00316 Ribosomal protein S1-like RNA-binding domain AV541_05060 SM00322 K homology RNA-binding domain AV541_05065 SM01387 AV541_05065 AV541_05100 SM00960 Roadblock/LC7 domain AV541_05140 SM00841 Elongation factor P, C-terminal AV541_05140 SM01185 AV541_05140 AV541_05150 SM00878 Biotin carboxylase C-terminal domain AV541_05150 SM01209 AV541_05150 AV541_05210 SM00382 ATPases associated with a variety of cellular activities AV541_05210 SM00464 Found in ATP-dependent protease La (LON) AV541_05275 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AV541_05275 SM00292 breast cancer carboxy-terminal domain AV541_05275 SM00532 Ligase N family AV541_05315 SM00864 Tubulin/FtsZ family, GTPase domain AV541_05315 SM00865 Tubulin/FtsZ family, C-terminal domain AV541_05320 SM00842 Cell division protein FtsA AV541_05440 SM00382 ATPases associated with a variety of cellular activities AV541_05440 SM00959 Rho termination factor, N-terminal domain AV541_05465 SM00116 Domain in cystathionine beta-synthase and other proteins. AV541_05465 SM00924 MgtE intracellular N domain AV541_05570 SM00382 ATPases associated with a variety of cellular activities AV541_05570 SM00962 SRP54-type protein, GTPase domain AV541_05570 SM00963 SRP54-type protein, helical bundle domain AV541_05600 SM00421 helix_turn_helix, Lux Regulon AV541_05600 SM00448 cheY-homologous receiver domain AV541_05610 SM00450 Rhodanese Homology Domain AV541_05645 SM00382 ATPases associated with a variety of cellular activities AV541_05670 SM00448 cheY-homologous receiver domain AV541_05670 SM00862 Transcriptional regulatory protein, C terminal AV541_05725 SM00347 helix_turn_helix multiple antibiotic resistance protein AV541_05770 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AV541_05905 SM00903 Flavin reductase like domain AV541_05925 SM01130 AV541_05925 AV541_06000 SM01321 AV541_06000 AV541_06050 SM00382 ATPases associated with a variety of cellular activities AV541_06110 SM00116 Domain in cystathionine beta-synthase and other proteins. AV541_06135 SM00798 AICARFT/IMPCHase bienzyme AV541_06135 SM00851 MGS-like domain AV541_06155 SM01207 AV541_06155 AV541_06165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV541_06175 SM00316 Ribosomal protein S1-like RNA-binding domain AV541_06175 SM00357 Cold shock protein domain AV541_06175 SM00955 AV541_06175 AV541_06200 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AV541_06230 SM00909 Sporulation and spore germination AV541_06270 SM00840 AV541_06270 AV541_06355 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AV541_06445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AV541_06520 SM00450 Rhodanese Homology Domain AV541_06530 SM00450 Rhodanese Homology Domain AV541_06530 SM00849 Metallo-beta-lactamase superfamily AV541_06535 SM00450 Rhodanese Homology Domain AV541_06545 SM00518 AP endonuclease family 2 AV541_06560 SM00116 Domain in cystathionine beta-synthase and other proteins. AV541_06585 SM00116 Domain in cystathionine beta-synthase and other proteins. AV541_06595 SM00935 Outer membrane protein (OmpH-like) AV541_06600 SM00843 AV541_06600 AV541_06655 SM00387 Histidine kinase-like ATPases AV541_06655 SM00388 His Kinase A (phosphoacceptor) domain AV541_06660 SM00448 cheY-homologous receiver domain AV541_06670 SM01209 AV541_06670 AV541_06670 SM01210 AV541_06670 AV541_06680 SM00849 Metallo-beta-lactamase superfamily AV541_06690 SM01207 AV541_06690 AV541_06695 SM00354 helix_turn _helix lactose operon repressor AV541_06710 SM00729 Elongator protein 3, MiaB family, Radical SAM AV541_06720 SM00867 YceI-like domain AV541_06805 SM00966 SpoVT / AbrB like domain AV541_06870 SM00382 ATPases associated with a variety of cellular activities AV541_06880 SM00382 ATPases associated with a variety of cellular activities AV541_06880 SM00464 Found in ATP-dependent protease La (LON) AV541_06950 SM00529 Helix-turn-helix diphteria tox regulatory element AV541_06950 SM00899 AV541_06950 AV541_06970 SM00822 AV541_06970 AV541_06980 SM00382 ATPases associated with a variety of cellular activities AV541_07000 SM00387 Histidine kinase-like ATPases AV541_07000 SM00388 His Kinase A (phosphoacceptor) domain AV541_07015 SM01130 AV541_07015 AV541_07030 SM00116 Domain in cystathionine beta-synthase and other proteins. AV541_07030 SM01091 Transporter associated domain AV541_07035 SM00347 helix_turn_helix multiple antibiotic resistance protein AV541_07115 SM00986 Uracil DNA glycosylase superfamily AV541_07115 SM00987 UreE urease accessory protein, C-terminal domain AV541_07130 SM00382 ATPases associated with a variety of cellular activities AV541_07175 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AV541_07185 SM00257 Lysin motif AV541_07200 SM00316 Ribosomal protein S1-like RNA-binding domain AV541_07200 SM00322 K homology RNA-binding domain AV541_07335 SM00829 Enoylreductase AV541_07430 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain AV541_07445 SM00327 von Willebrand factor (vWF) type A domain AV541_07465 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain AV541_07555 SM01018 B12 binding domain AV541_07620 SM00729 Elongator protein 3, MiaB family, Radical SAM AV541_07620 SM00876 Biotin and Thiamin Synthesis associated domain AV541_07655 SM00822 AV541_07655 AV541_07720 SM00116 Domain in cystathionine beta-synthase and other proteins. AV541_07725 SM00831 Cation transporter/ATPase, N-terminus AV541_07760 SM00382 ATPases associated with a variety of cellular activities AV541_07845 SM00829 Enoylreductase AV541_07960 SM00363 S4 RNA-binding domain AV541_07965 SM00859 Semialdehyde dehydrogenase, NAD binding domain AV541_07980 SM00382 ATPases associated with a variety of cellular activities AV541_07980 SM01086 C-terminal, D2-small domain, of ClpB protein AV541_07985 SM00382 ATPases associated with a variety of cellular activities AV541_08165 SM00422 helix_turn_helix, mercury resistance AV541_08170 SM00346 helix_turn_helix isocitrate lyase regulation AV541_08205 SM00729 Elongator protein 3, MiaB family, Radical SAM AV541_08345 SM00116 Domain in cystathionine beta-synthase and other proteins. AV541_08350 SM00382 ATPases associated with a variety of cellular activities AV541_08375 SM00829 Enoylreductase AV541_08450 SM00382 ATPases associated with a variety of cellular activities AV541_08485 SM01234 AV541_08485 AV541_08510 SM00382 ATPases associated with a variety of cellular activities AV541_08525 SM00382 ATPases associated with a variety of cellular activities AV541_08525 SM00962 SRP54-type protein, GTPase domain AV541_08525 SM00963 SRP54-type protein, helical bundle domain AV541_08595 SM00028 Tetratricopeptide repeats AV541_08600 SM00903 Flavin reductase like domain AV541_08625 SM00822 AV541_08625 AV541_08640 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AV541_08670 SM00382 ATPases associated with a variety of cellular activities AV541_08675 SM00028 Tetratricopeptide repeats AV541_08680 SM00382 ATPases associated with a variety of cellular activities AV541_08745 SM00830 Chorismate mutase type II AV541_08825 SM00740 AV541_08825 AV541_08855 SM00729 Elongator protein 3, MiaB family, Radical SAM AV541_08890 SM00028 Tetratricopeptide repeats AV541_08905 SM00448 cheY-homologous receiver domain AV541_08905 SM00862 Transcriptional regulatory protein, C terminal AV541_08935 SM00704 CDGSH-type zinc finger. Function unknown. AV541_08985 SM00966 SpoVT / AbrB like domain AV541_09090 SM00938 Nitrogen regulatory protein P-II AV541_09175 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AV541_09175 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AV541_09175 SM00493 AV541_09175 AV541_09230 SM00650 Ribosomal RNA adenine dimethylases AV541_09260 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AV541_09305 SM00836 DALR anticodon binding domain AV541_09305 SM01016 Arginyl tRNA synthetase N terminal dom AV541_09310 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AV541_09370 SM00861 Transketolase, pyrimidine binding domain AV541_09410 SM00530 Helix-turn-helix XRE-family like proteins AV541_09450 SM00487 DEAD-like helicases superfamily AV541_09450 SM00490 helicase superfamily c-terminal domain AV541_09465 SM00478 endonuclease III AV541_09465 SM00525 AV541_09465 AV541_09470 SM01022 AV541_09470 AV541_09475 SM00382 ATPases associated with a variety of cellular activities AV541_09595 SM00382 ATPases associated with a variety of cellular activities AV541_09755 SM00506 Appr-1"-p processing enzyme AV541_09810 SM00937 AV541_09810 AV541_09820 SM00387 Histidine kinase-like ATPases AV541_09820 SM00388 His Kinase A (phosphoacceptor) domain AV541_09825 SM00448 cheY-homologous receiver domain AV541_09825 SM00862 Transcriptional regulatory protein, C terminal AV541_09830 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AV541_09835 SM00363 S4 RNA-binding domain AV541_09860 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain AV541_09870 SM00829 Enoylreductase AV541_09900 SM00316 Ribosomal protein S1-like RNA-binding domain AV541_09935 SM01058 CarD-like/TRCF domain AV541_09965 SM00271 DnaJ molecular chaperone homology domain AV541_09970 SM00357 Cold shock protein domain AV541_10025 SM00331 Sigma factor PP2C-like phosphatases AV541_10025 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AV541_10030 SM00562 AV541_10030 AV541_10040 SM00905 Dihydroneopterin aldolase AV541_10105 SM00382 ATPases associated with a variety of cellular activities AV541_10125 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AV541_10125 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AV541_10165 SM01120 AV541_10165 AV541_10165 SM01121 AV541_10165 AV541_10175 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AV541_10175 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AV541_10205 SM00788 Adenylosuccinate synthetase AV541_10455 SM00966 SpoVT / AbrB like domain AV541_10565 SM00855 Phosphoglycerate mutase family AV541_10635 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain AV541_10660 SM00098 Alkaline phosphatase homologues AV541_10670 SM00950 AV541_10670 AV541_10700 SM00422 helix_turn_helix, mercury resistance AV541_10705 SM00100 Cyclic nucleotide-monophosphate binding domain AV541_10705 SM00419 helix_turn_helix, cAMP Regulatory protein AV541_10730 SM00849 Metallo-beta-lactamase superfamily AV541_10805 SM00470 ParB-like nuclease domain AV541_10890 SM00347 helix_turn_helix multiple antibiotic resistance protein AV541_10940 SM00100 Cyclic nucleotide-monophosphate binding domain AV541_10940 SM00419 helix_turn_helix, cAMP Regulatory protein AV541_10955 SM00926 Molybdopterin oxidoreductase Fe4S4 domain