LOCUS LC035386 5688 bp DNA circular PHG 18-MAR-2017 DEFINITION Thermus phage phiOH3 genomic DNA, complete genome. ACCESSION LC035386 VERSION LC035386.1 KEYWORDS . SOURCE Thermus phage phiOH3 ORGANISM Thermus phage phiOH3 Viruses; ssDNA viruses; Inoviridae; Inovirus; unclassified Inovirus. REFERENCE 1 AUTHORS Nagayoshi,Y., Kumagae,K., Mori,K., Tashiro,K., Nakamura,A., Fujino,Y., Hiromasa,Y., Iwamoto,T., Kuhara,S., Ohshima,T. and Doi,K. TITLE Physiological Properties and Genome Structure of the Hyperthermophilic Filamentous Phage phiOH3 Which Infects Thermus thermophilus HB8 JOURNAL Front Microbiol 7, 50 (2016) PUBMED 26941711 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 5688) AUTHORS Doi,K., Kumagae,K., Nagayoshi,Y., Nakamura,A. and Fujino,Y. TITLE Direct Submission JOURNAL Submitted (17-MAR-2015) Contact:Katsumi Doi Kyushu University, Institute of Genetic Resources; 6-10-1 Hakozaki, Higashi-ku, Fukuoka, Fukuoka 812-8581, Japan FEATURES Location/Qualifiers source 1..5688 /organism="Thermus phage phiOH3" /mol_type="genomic DNA" /host="Thermus thermophilus HB8" /db_xref="taxon:1968339" /country="Japan" gene 319..1659 /gene="II" CDS 319..1659 /gene="II" /codon_start=1 /transl_table=11 /product="replication endonuclease" /protein_id="BAS49596.1" /translation="MKLLGHGLDTLVLNFYWADGAYTLPEGLPEKLDLLKDQYRVNPE EAIFWGVDAYLPIPNPALEDTLYEAALVRPTRHYPWQLSFGADALLVSLSAVKDATRR RTFPAVRVEVTGRFMMYARRDAQAVVSWLLDALQNLTGSRPERVQVSRADLFVDVEVE PGTLKVQDVDRFTSRSRIRGLYFVGEAEGRQAPAPHGEGGPMSNTPPATRLQVPPSWE EGPEHVAAYMRGREWSGFTFGRGPLMARVYSKSVEAKSKPLTRVLLKAYEEAHGPISG EVIRVEYQLRTEALSEMVVPGDGSDVRDWDTFLWAVPHIWEYLTGSWLLLRDRGNYKY AWDAPVDSLWLLVQGAFKKGGESEGFGPVVRDKRLGVVDPWALVKQSFGAFMTAVVSA GISADFSAFWYAVARRFSKVLGVERLSLDYEGVRARKLARFGLMPEAYRFGGVG" gene 1656..1949 /gene="V" CDS 1656..1949 /gene="V" /codon_start=1 /transl_table=11 /product="single-strand DNA binding protein" /protein_id="BAS49597.1" /translation="MKVLVLGVTEYARKDGTKAARVIVASTPRNPNTRGLATAELEAV PEVVDQFKVLPGLYDLAVEVSVSSYAGKAEARPVIVSARFEAAVVPERKEVKA" gene 1946..2038 /gene="VII" CDS 1946..2038 /gene="VII" /codon_start=1 /transl_table=11 /product="minor coat protein" /protein_id="BAS49598.1" /translation="MIDPAYLHEALKVFAFGLGLIGGLLIGGDW" gene 2039..2143 /gene="IX" CDS 2039..2143 /gene="IX" /codon_start=1 /transl_table=11 /product="minor coat protein" /protein_id="BAS49599.1" /translation="MNPATWFLWVLGMTALPYTLLAAYRYAGRLYGGL" gene 2363..2503 /gene="VIII" CDS 2363..2503 /gene="VIII" /codon_start=1 /transl_table=11 /product="major coat protein" /protein_id="BAS49600.1" /translation="MEFDAGAIVSTVQNYILAIAGAGVALLGLTIGLSAAWRYAKKFL KG" gene 2507..4027 /gene="III" CDS 2507..4027 /gene="III" /codon_start=1 /transl_table=11 /product="adsorption protein" /protein_id="BAS49601.1" /translation="MSRLALPILLVLLSLGWGGPALAQPQLYRDAIRSAVQDMVVAEV IRWPDSAVRKSATVGRYVRWGGAIVLGSALVYTALDYFYNVLKAQTGTSLDRWYFWSN PYVEVGRCIDRGSYRDFIAVAYVNGRQVNFYSTSSYGKCDVPSLQSFTEHWYNWHLVR NYSELQGVPTQYVSPPPGTCPSGWTCIAVAPQLDRPPLPDWLQSHPDAADGVKQAVTT YLDRNPIGSPYAPYPGVQLEPIPNPNQWTDNPFTRPDIDTDGDGWPDPVEWREANRRG VPWPDLINNPQAYPDPNGDPDGDGYTNLEEVQQGTDPYDPASYPVRRSPTSPWVDTDG DGYSDEEEIRKGTNPNDPASYPDTPPEQQPEENPDEPQWPGGPPSGRIDPVQLPEVEQ VEREKLPEWDKLNPLAEAWRQQVVDRVSQKFAEVQNILKDRFPFGIIAAIRQRVSFAD AQCAIQLSLPPLGTLAVDICSTPVWQLATSFRPVLAGLVWVAFGFAVIRRALDVQK" gene 4277..4705 /gene="VI" CDS 4277..4705 /gene="VI" /codon_start=1 /transl_table=11 /product="minor coat protein" /protein_id="BAS49602.1" /translation="MGAIISGLLDLLQWLASTFSAVAHWLVATVQAVAQWVLGLVGWV ISTAWNLLVQVLLWLVNGVFWLLGHLVEAGLSVLVVLARLLPPIPPDLTIVHDVIIPA FNVANQILPITDALAAGSLWMIFYALMAAWRVITFIRGGR" gene 4705..5661 /gene="IV" CDS 4705..5661 /gene="IV" /codon_start=1 /transl_table=11 /product="morphogenesis related protein" /protein_id="BAS49603.1" /translation="MIEAFVGIPGSGKSYALVLKGLQSLAAGRPVYANFGFIRENVYY WLRKRAKLSHREAVLRTDLIREIRDYSELLNVHDGVLLFDEAHMWLPSRQFDLIPVEV IAFWSQHRKVGVDVYLATQRYGSVDAIVRELVAFVYWARPAPFWLRVLLLPWARGRKV LRYTSIMDESLGMMQRQAKGIFEGVARNSVVILDPLAASCYDTYAIFEPPIVRLQREL DPKKRAIFDRMGLAWDASKVKGRRDVPRATDGFPWLTMQELAQAYREGRPPHELLRSK WQEWVDSLCGVGSPDSSPDAARASAEESAEGSFDWSCFAWGS" ORIGIN 1 tcgtacaagg tgggcaggtg ctaatctggt ttggggatag tgtaggccgt ccagtatact 61 ggccttcgtg gtcgtgggaa agactggcct gggctccgat tctggcttgc ttctctccat 121 gccgtcaagg ttgagccgta cgcgtccctt tacgctcgcc tactgcaggc gggcaagcct 181 ccccaagtgg ctcgtgtggc cgtggcccat aggctggcta gggcggcttg ggctgttgtt 241 gtccgtagcg tctaggtcgg cattctcctc ttgactcttg acaagggagg tagtgtagtc 301 ttacaatccc ctgccaagat gaagctgctc gggcatggct tggatactct cgtgctcaac 361 ttctactggg ctgacggggc ctataccctt cccgagggcc ttcctgagaa gcttgaccta 421 ctcaaggacc agtaccgcgt caatcccgag gaggccattt tttggggggt ggacgcttac 481 ctgcccattc ctaaccctgc tctggaggat accctttatg aagcggcttt agtgcggcct 541 acccgtcatt atccttggca gttgagcttt ggggctgacg ctcttctcgt gagcctttcg 601 gctgtgaagg atgctacacg gcggcgtact ttcccggcgg tccgcgtgga ggttacgggc 661 cgcttcatga tgtacgctcg ccgggatgct caggctgtcg tttcctggct cttggatgcc 721 ctgcagaatc tgacgggttc ccgtcctgag cgtgttcagg tttcccgtgc tgacctcttt 781 gttgatgtgg aggtggagcc gggcaccttg aaggtccagg atgtggaccg cttcacgtcc 841 cggagccgta tccgtgggct ctacttcgtg ggggaggcgg agggccgcca ggcccccgcc 901 ccccacggcg aaggggggcc catgagtaac acgccccccg ctaccagact tcaggtcccc 961 ccctcctggg aggagggtcc tgagcacgtt gctgcttaca tgcgtggtcg ggagtggtcc 1021 ggcttcacct ttggccgggg ccccctcatg gctcgggtct actccaagag tgttgaagcc 1081 aagtctaagc ctctgacgcg tgtcctcctc aaggcgtatg aggaggctca cgggcccatt 1141 tctggggaag tgattcgcgt ggagtatcag cttcgcacgg aagctctctc tgagatggtt 1201 gtgcctgggg atggctctga tgttcgcgat tgggatacgt tcttgtgggc cgtcccgcat 1261 atctgggagt atctgacggg ttcttggttg ttgcttcggg ataggggcaa ttacaagtat 1321 gcctgggatg ctcccgtgga ttcgctttgg cttttggttc aaggggcttt caaaaaaggg 1381 ggtgagagtg agggttttgg tccggtggtg agggataagc gtctgggagt tgtggacccc 1441 tgggccttgg tgaagcagtc ttttggcgca ttcatgacgg cggtcgtttc tgctggtatc 1501 tctgccgact tctccgcctt ctggtacgcc gttgcccggc gtttttctaa ggtcctcggg 1561 gttgagcgtc tttctctgga ctacgaaggc gtgcgtgccc gcaagctggc gcggtttggt 1621 cttatgcctg aggcatacag gtttggaggt gtgggatgaa ggttttggtt ctaggagtta 1681 ctgagtacgc gcggaaggat ggcactaagg cggctagggt aatcgtggcc tctactcctc 1741 gtaaccccaa cactaggggg cttgctactg ctgagcttga ggccgttccc gaggttgtgg 1801 accagttcaa ggtcctgcct ggcctctatg accttgccgt ggaggtctcc gtgtctagct 1861 acgctggcaa ggccgaggct cgccccgtaa tcgtttctgc tcgctttgag gccgccgtgg 1921 ttcctgagcg taaggaggtc aaggcgtgat tgaccctgcc tatctccatg aggctctaaa 1981 ggttttcgcc tttggcctcg ggctgatagg cgggctcctt attggggggg attggtagat 2041 gaatccggcc acctggttcc tctgggtcct tggcatgacg gccttgccct acaccctgct 2101 ggcggcgtat cggtatgcgg gccgtctcta tggggggttg tgatgttgca gtgcgtcagg 2161 tgcggcctgc tttatacctt tgctcccccg ggttcttgtg ttctctgtgg gggtgaagtg 2221 tggattacgg tgaggttttc gccgccttct ggtggggcct cggtgctggc cttgtggcct 2281 cgttcctccg caatctcctt cgccggctct aggagcaatc gggaggttac tcccgtgaag 2341 gctcagaaag gaggtgagtg ccgtggagtt tgatgctggg gccatcgtta gcaccgttca 2401 aaactacatc ctggctatcg cgggcgctgg tgtcgcgctc ttgggcctga ccatcggcct 2461 tagcgcggcg tggcgctacg ccaagaagtt cctgaagggc taggccatgt cccgattggc 2521 cctccccatc cttctggtgc tcctctccct agggtgggga gggcctgccc ttgctcaacc 2581 tcagttgtat agggatgcca ttcgctccgc tgttcaggat atggtcgtgg ctgaagtaat 2641 ccggtggccc gattctgctg ttcgtaagtc ggctactgta ggccgctatg tccgttgggg 2701 cggtgctatc gttcttgggt ctgctcttgt ctatactgcc ctggactact tctataacgt 2761 tctcaaggct caaacgggta cttctctgga ccgctggtat ttctggagta atccttatgt 2821 tgaagttggc cgctgtattg ataggggctc ctatcgggat tttattgccg tggcgtatgt 2881 gaatggtcgg caagtcaact tctattctac ttccagctat ggcaagtgcg acgtgccttc 2941 cttgcagtcg tttaccgaac actggtataa ctggcacttg gttcgcaact attctgagct 3001 tcagggcgtt cctactcagt atgtttctcc tcccccgggt acttgccctt cggggtggac 3061 gtgtatagct gtggcccctc agcttgaccg tcctcctctc cctgattggt tgcagtcgca 3121 tcctgacgct gctgatggcg tgaagcaggc ggttactact tacctggaca ggaaccctat 3181 tggttcccct tatgctccct acccgggagt tcagcttgaa cccattccta accctaatca 3241 gtggaccgat aaccccttta cccgccctga catagatact gacggggatg gatggcctga 3301 cccggtggag tggagggagg ccaataggcg gggagttccc tggcctgacc tgataaataa 3361 ccctcaggct taccctgacc ctaatgggga cccggatggg gatggctaca ctaacctgga 3421 ggaggtccag cagggtactg acccctatga ccccgcttct tatcctgtcc gccgttcccc 3481 tactagtcct tgggtagata ctgatgggga tggctattct gacgaggagg aaatacgcaa 3541 ggggactaac cctaacgacc ccgcttctta tcctgatact cctcctgaac agcagcctga 3601 agagaaccct gatgaacctc agtggcccgg tgggcctcct tctggccgta ttgaccccgt 3661 gcagttgccc gaggttgagc aagttgagcg tgaaaagctt cccgagtggg ataagttgaa 3721 ccccctggct gaggcatgga ggcagcaggt agttgaccgg gtttctcaga agtttgctga 3781 ggtacagaac attttgaagg accgctttcc ctttggcata attgcggcta ttcgccagcg 3841 ggtgtctttt gcggatgctc aatgcgctat tcagctttcc ctgccccctt tgggtaccct 3901 ggccgtggat atttgcagta cccccgtgtg gcagcttgct acgtctttcc gccccgttct 3961 cgcggggctg gtctgggttg ctttcggctt cgccgtaatc cggagggccc tggatgtcca 4021 aaagtgaacc ccttcacaag cacatttttc ccgcgcccat ccccaccatg cctctttcct 4081 gggggggcgg ggccccgtca aggccgttag ccccggaggg ccgggccgtg caagcctcta 4141 cgatgtccgg agcttcgcga ggaccgggtg gagacctgcc ggaggcccgg cccggagggg 4201 gccgaaggcg ccttgacggg gtgccccccc ggggcaaact ctttggtggg atgggtgcgg 4261 gtgaagggag gtgcgtatgg gcgcgataat ctccggtctc ctggacctcc tccagtggct 4321 ggctagcacc ttctccgccg tggctcactg gttggttgcc acggttcagg cggtggctca 4381 gtgggttctg ggtttggtcg gctgggttat atccaccgct tggaatctcc tggtacaggt 4441 tcttttgtgg ctcgtcaacg gggtcttttg gttgctgggc catctcgttg aggctggcct 4501 ttctgtcctt gttgttctgg ctcgtctttt gcctcctatc cctcctgacc tgactattgt 4561 ccatgatgtg attattcccg ctttcaacgt tgctaatcag attttgccca ttactgatgc 4621 tcttgctgcg ggctctctct ggatgatttt ctatgcgctt atggcggctt ggcgggtcat 4681 taccttcatt cgtggtggtc gctgatgata gaggctttcg tgggtattcc tggcagtggt 4741 aaatcctacg ccctggttct caagggcctc cagtctcttg cagcaggccg ccccgtctat 4801 gccaacttcg gctttatccg ggaaaacgtc tactattggc ttcgcaagag ggctaagctc 4861 tcccataggg aggccgtctt gcgtactgac cttatccgtg agatacggga ttattccgag 4921 ttgctgaatg ttcatgatgg cgtgttgctc tttgatgagg cccatatgtg gcttccctcc 4981 cggcagtttg accttattcc cgtggaggtc attgccttct ggtctcagca ccgcaaggtg 5041 ggggtggatg tttacctggc tactcagcgc tatggctctg tggatgccat agtgagggag 5101 ttggttgcct tcgtctactg ggctcgccct gctccctttt ggttgcgtgt tctcctgctc 5161 ccttgggctc ggggtcgtaa ggtcctccgt tatacgtcca taatggacga gtccttgggc 5221 atgatgcagc gccaagccaa gggcatcttt gagggcgttg cccgtaatag cgtcgttatc 5281 ttggaccccc ttgctgcctc ctgctacgat acctatgcta tttttgaacc tcccatagtc 5341 cgccttcagc gtgaactgga ccccaagaag cgggccattt ttgaccgcat gggcctggct 5401 tgggatgcct ctaaggtaaa ggggcgccgt gatgttcccc gggctactga cggctttccc 5461 tggctgacta tgcaggagct cgctcaggct taccgggagg gccgtcctcc ccatgagctg 5521 ctgcgctcaa agtggcagga gtgggtagac tccttgtgtg gggtgggttc tcctgactct 5581 tctcctgacg ctgctcgtgc ttctgctgag gagtccgctg aggggtcttt tgactggtcc 5641 tgttttgctt ggggtagcta ggtgcttggt gtggtgagtt ccacgtgc //