locus-tag class description TT_C0003 PF07992 Pyridine nucleotide-disulphide oxidoreductase TT_C0005 PF02021 Uncharacterised protein family UPF0102 TT_C0006 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TT_C0007 PF02525 Flavodoxin-like fold TT_C0008 PF00814 Glycoprotease family TT_C0009 PF00528 Binding-protein-dependent transport system inner membrane component TT_C0010 PF00528 Binding-protein-dependent transport system inner membrane component TT_C0016 PF01790 Prolipoprotein diacylglyceryl transferase TT_C0017 PF14602 Hexapeptide repeat of succinyl-transferase TT_C0017 PF12804 MobA-like NTP transferase domain TT_C0017 PF00132 Bacterial transferase hexapeptide (six repeats) TT_C0018 PF02416 mttA/Hcf106 family TT_C0019 PF00902 Sec-independent protein translocase protein (TatC) TT_C0020 PF01817 Chorismate mutase type II TT_C0020 PF00793 DAHP synthetase I family TT_C0023 PF00890 FAD binding domain TT_C0032 PF13823 Alcohol dehydrogenase GroES-associated TT_C0032 PF08240 Alcohol dehydrogenase GroES-like domain TT_C0032 PF00107 Zinc-binding dehydrogenase TT_C0035 PF06480 FtsH Extracellular TT_C0035 PF17862 AAA+ lid domain TT_C0035 PF00004 ATPase family associated with various cellular activities (AAA) TT_C0035 PF01434 Peptidase family M41 TT_C0038 PF05491 RuvB C-terminal winged helix domain TT_C0038 PF05496 Holliday junction DNA helicase RuvB P-loop domain TT_C0038 PF17864 RuvB AAA lid domain TT_C0039 PF02548 Ketopantoate hydroxymethyltransferase TT_C0040 PF00849 RNA pseudouridylate synthase TT_C0041 PF01555 DNA methylase TT_C0043 PF00155 Aminotransferase class I and II TT_C0044 PF13286 Phosphohydrolase-associated domain TT_C0044 PF01966 HD domain TT_C0045 PF02801 Beta-ketoacyl synthase, C-terminal domain TT_C0045 PF00109 Beta-ketoacyl synthase, N-terminal domain TT_C0046 PF00550 Phosphopantetheine attachment site TT_C0048 PF00698 Acyl transferase domain TT_C0049 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TT_C0049 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TT_C0050 PF01783 Ribosomal L32p protein family TT_C0057 PF00881 Nitroreductase family TT_C0060 PF00155 Aminotransferase class I and II TT_C0061 PF00475 Imidazoleglycerol-phosphate dehydratase TT_C0062 PF00117 Glutamine amidotransferase class-I TT_C0063 PF00294 pfkB family carbohydrate kinase TT_C0064 PF00571 CBS domain TT_C0064 PF00478 IMP dehydrogenase / GMP reductase domain TT_C0067 PF02600 Disulfide bond formation protein DsbB TT_C0068 PF00448 SRP54-type protein, GTPase domain TT_C0068 PF02881 SRP54-type protein, helical bundle domain TT_C0070 PF00749 tRNA synthetases class I (E and Q), catalytic domain TT_C0071 PF00005 ABC transporter TT_C0073 PF05175 Methyltransferase small domain TT_C0073 PF17827 PrmC N-terminal domain TT_C0075 PF02096 60Kd inner membrane protein TT_C0076 PF01809 Putative membrane protein insertion efficiency factor TT_C0077 PF00825 Ribonuclease P TT_C0078 PF12399 Branched-chain amino acid ATP-binding cassette transporter TT_C0078 PF00005 ABC transporter TT_C0079 PF00501 AMP-binding enzyme TT_C0080 PF02653 Branched-chain amino acid transport system / permease component TT_C0081 PF11862 Domain of unknown function (DUF3382) TT_C0081 PF02653 Branched-chain amino acid transport system / permease component TT_C0083 PF00005 ABC transporter TT_C0084 PF00005 ABC transporter TT_C0085 PF00950 ABC 3 transport family TT_C0086 PF02082 Transcriptional regulator TT_C0087 PF00266 Aminotransferase class-V TT_C0088 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TT_C0089 PF02224 Cytidylate kinase TT_C0091 PF00293 NUDIX domain TT_C0096 PF07992 Pyridine nucleotide-disulphide oxidoreductase TT_C0097 PF00698 Acyl transferase domain TT_C0097 PF14765 Polyketide synthase dehydratase TT_C0097 PF00109 Beta-ketoacyl synthase, N-terminal domain TT_C0097 PF02801 Beta-ketoacyl synthase, C-terminal domain TT_C0097 PF08659 KR domain TT_C0097 PF00550 Phosphopantetheine attachment site TT_C0097 PF16197 Ketoacyl-synthetase C-terminal extension TT_C0097 PF08240 Alcohol dehydrogenase GroES-like domain TT_C0098 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TT_C0099 PF00528 Binding-protein-dependent transport system inner membrane component TT_C0100 PF00528 Binding-protein-dependent transport system inner membrane component TT_C0100 PF12911 N-terminal TM domain of oligopeptide transport permease C TT_C0101 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TT_C0101 PF00005 ABC transporter TT_C0102 PF00005 ABC transporter TT_C0102 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TT_C0103 PF00571 CBS domain TT_C0104 PF00850 Histone deacetylase domain TT_C0105 PF02597 ThiS family TT_C0106 PF01171 PP-loop family TT_C0107 PF00128 Alpha amylase, catalytic domain TT_C0108 PF01209 ubiE/COQ5 methyltransferase family TT_C0109 PF01209 ubiE/COQ5 methyltransferase family TT_C0110 PF00795 Carbon-nitrogen hydrolase TT_C0112 PF08331 Domain of unknown function (DUF1730) TT_C0115 PF03447 Homoserine dehydrogenase, NAD binding domain TT_C0115 PF00742 Homoserine dehydrogenase TT_C0115 PF01842 ACT domain TT_C0117 PF00291 Pyridoxal-phosphate dependent enzyme TT_C0122 PF11497 NADH-quinone oxidoreductase chain 15 TT_C0123 PF04055 Radical SAM superfamily TT_C0123 PF06969 HemN C-terminal domain TT_C0124 PF05161 MOFRL family TT_C0124 PF13660 Domain of unknown function (DUF4147) TT_C0125 PF01850 PIN domain TT_C0127 PF13183 4Fe-4S dicluster domain TT_C0127 PF02754 Cysteine-rich domain TT_C0129 PF02913 FAD linked oxidases, C-terminal domain TT_C0129 PF01565 FAD binding domain TT_C0131 PF01614 Bacterial transcriptional regulator TT_C0131 PF09339 IclR helix-turn-helix domain TT_C0132 PF13411 MerR HTH family regulatory protein TT_C0133 PF01546 Peptidase family M20/M25/M40 TT_C0133 PF07687 Peptidase dimerisation domain TT_C0134 PF01588 Putative tRNA binding domain TT_C0135 PF14535 AMP-binding enzyme C-terminal domain TT_C0135 PF00501 AMP-binding enzyme TT_C0137 PF02222 ATP-grasp domain TT_C0137 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain TT_C0138 PF00731 AIR carboxylase TT_C0142 PF03741 Integral membrane protein TerC family TT_C0143 PF01883 Iron-sulfur cluster assembly protein TT_C0144 PF00390 Malic enzyme, N-terminal domain TT_C0144 PF03949 Malic enzyme, NAD binding domain TT_C0148 PF08669 Glycine cleavage T-protein C-terminal barrel domain TT_C0148 PF01571 Aminomethyltransferase folate-binding domain TT_C0149 PF01597 Glycine cleavage H-protein TT_C0150 PF02347 Glycine cleavage system P-protein TT_C0151 PF02347 Glycine cleavage system P-protein TT_C0152 PF00581 Rhodanese-like domain TT_C0154 PF13247 4Fe-4S dicluster domain TT_C0155 PF10518 TAT (twin-arginine translocation) pathway signal sequence TT_C0155 PF01568 Molydopterin dinucleotide binding domain TT_C0155 PF00384 Molybdopterin oxidoreductase TT_C0155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TT_C0157 PF00196 Bacterial regulatory proteins, luxR family TT_C0157 PF00072 Response regulator receiver domain TT_C0158 PF07730 Histidine kinase TT_C0158 PF05384 Sensor protein DegS TT_C0158 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TT_C0159 PF06574 FAD synthetase TT_C0159 PF01687 Riboflavin kinase TT_C0160 PF00293 NUDIX domain TT_C0161 PF01979 Amidohydrolase family TT_C0164 PF04539 Sigma-70 region 3 TT_C0164 PF04545 Sigma-70, region 4 TT_C0164 PF04542 Sigma-70 region 2 TT_C0164 PF00140 Sigma-70 factor, region 1.2 TT_C0165 PF05175 Methyltransferase small domain TT_C0165 PF08468 Methyltransferase small domain N-terminal TT_C0166 PF00696 Amino acid kinase family TT_C0166 PF01842 ACT domain TT_C0166 PF13840 ACT domain TT_C0167 PF00156 Phosphoribosyl transferase domain TT_C0168 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TT_C0168 PF00056 lactate/malate dehydrogenase, NAD binding domain TT_C0169 PF02629 CoA binding domain TT_C0169 PF00549 CoA-ligase TT_C0170 PF08442 ATP-grasp domain TT_C0170 PF00549 CoA-ligase TT_C0171 PF01861 Branched-chain polyamine synthase A C-terminal domain TT_C0172 PF01938 TRAM domain TT_C0173 PF18073 Rubredoxin metal binding domain TT_C0174 PF02861 Clp amino terminal domain, pathogenicity island component TT_C0174 PF10431 C-terminal, D2-small domain, of ClpB protein TT_C0174 PF07724 AAA domain (Cdc48 subfamily) TT_C0174 PF00004 ATPase family associated with various cellular activities (AAA) TT_C0174 PF17871 AAA lid domain TT_C0175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TT_C0175 PF03129 Anticodon binding domain TT_C0177 PF02774 Semialdehyde dehydrogenase, dimerisation domain TT_C0177 PF01118 Semialdehyde dehydrogenase, NAD binding domain TT_C0178 PF01479 S4 domain TT_C0178 PF01728 FtsJ-like methyltransferase TT_C0181 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain TT_C0181 PF00749 tRNA synthetases class I (E and Q), catalytic domain TT_C0182 PF00378 Enoyl-CoA hydratase/isomerase TT_C0183 PF00707 Translation initiation factor IF-3, C-terminal domain TT_C0183 PF05198 Translation initiation factor IF-3, N-terminal domain TT_C0184 PF01632 Ribosomal protein L35 TT_C0185 PF00453 Ribosomal protein L20 TT_C0187 PF02660 Glycerol-3-phosphate acyltransferase TT_C0188 PF01048 Phosphorylase superfamily TT_C0189 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TT_C0189 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TT_C0190 PF10415 Fumarase C C-terminus TT_C0190 PF00206 Lyase TT_C0191 PF00108 Thiolase, N-terminal domain TT_C0191 PF02803 Thiolase, C-terminal domain TT_C0194 PF01048 Phosphorylase superfamily TT_C0195 PF01168 Alanine racemase, N-terminal domain TT_C0198 PF01926 50S ribosome-binding GTPase TT_C0198 PF13167 GTP-binding GTPase N-terminal TT_C0198 PF16360 GTP-binding GTPase Middle Region TT_C0199 PF00708 Acylphosphatase TT_C0201 PF08240 Alcohol dehydrogenase GroES-like domain TT_C0201 PF00107 Zinc-binding dehydrogenase TT_C0202 PF07995 Glucose / Sorbosone dehydrogenase TT_C0205 PF01425 Amidase TT_C0206 PF02811 PHP domain TT_C0206 PF14579 Helix-hairpin-helix motif TT_C0206 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TT_C0206 PF07733 Bacterial DNA polymerase III alpha NTPase domain TT_C0206 PF11490 DNA polymerase III polC-type N-terminus II TT_C0206 PF14480 DNA polymerase III polC-type N-terminus I TT_C0206 PF00929 Exonuclease TT_C0210 PF00485 Phosphoribulokinase / Uridine kinase family TT_C0211 PF03459 TOBE domain TT_C0211 PF17912 MalK OB fold domain TT_C0211 PF00005 ABC transporter TT_C0213 PF00266 Aminotransferase class-V TT_C0214 PF04260 Protein of unknown function (DUF436) TT_C0216 PF11862 Domain of unknown function (DUF3382) TT_C0216 PF02653 Branched-chain amino acid transport system / permease component TT_C0217 PF00501 AMP-binding enzyme TT_C0218 PF12399 Branched-chain amino acid ATP-binding cassette transporter TT_C0218 PF00005 ABC transporter TT_C0219 PF00005 ABC transporter TT_C0221 PF13458 Periplasmic binding protein TT_C0222 PF16363 GDP-mannose 4,6 dehydratase TT_C0225 PF03480 Bacterial extracellular solute-binding protein, family 7 TT_C0226 PF08544 GHMP kinases C terminal TT_C0226 PF00288 GHMP kinases N terminal domain TT_C0226 PF10509 Galactokinase galactose-binding signature TT_C0227 PF01297 Zinc-uptake complex component A periplasmic TT_C0231 PF00762 Ferrochelatase TT_C0232 PF01208 Uroporphyrinogen decarboxylase (URO-D) TT_C0236 PF13193 AMP-binding enzyme C-terminal domain TT_C0236 PF00501 AMP-binding enzyme TT_C0237 PF00171 Aldehyde dehydrogenase family TT_C0237 PF01575 MaoC like domain TT_C0238 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TT_C0238 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TT_C0238 PF02770 Acyl-CoA dehydrogenase, middle domain TT_C0239 PF17932 Tetracyclin repressor-like, C-terminal domain TT_C0239 PF00440 Bacterial regulatory proteins, tetR family TT_C0241 PF02261 Aspartate decarboxylase TT_C0242 PF06968 Biotin and Thiamin Synthesis associated domain TT_C0242 PF04055 Radical SAM superfamily TT_C0244 PF08704 tRNA methyltransferase complex GCD14 subunit TT_C0246 PF06153 Cyclic-di-AMP receptor TT_C0247 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TT_C0247 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TT_C0249 PF05698 Bacterial trigger factor protein (TF) C-terminus TT_C0249 PF05697 Bacterial trigger factor protein (TF) TT_C0250 PF00574 Clp protease TT_C0251 PF06689 ClpX C4-type zinc finger TT_C0251 PF10431 C-terminal, D2-small domain, of ClpB protein TT_C0251 PF07724 AAA domain (Cdc48 subfamily) TT_C0252 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain TT_C0252 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TT_C0252 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TT_C0253 PF02607 B12 binding domain TT_C0253 PF02574 Homocysteine S-methyltransferase TT_C0253 PF00809 Pterin binding enzyme TT_C0253 PF02965 Vitamin B12 dependent methionine synthase, activation domain TT_C0253 PF02310 B12 binding domain TT_C0255 PF04715 Anthranilate synthase component I, N terminal region TT_C0255 PF00425 chorismate binding enzyme TT_C0257 PF01272 Transcription elongation factor, GreA/GreB, C-term TT_C0257 PF03449 Transcription elongation factor, N-terminal TT_C0259 PF13277 YmdB-like protein TT_C0260 PF00311 Phosphoenolpyruvate carboxylase TT_C0261 PF01741 Large-conductance mechanosensitive channel, MscL TT_C0264 PF07724 AAA domain (Cdc48 subfamily) TT_C0264 PF10431 C-terminal, D2-small domain, of ClpB protein TT_C0264 PF00004 ATPase family associated with various cellular activities (AAA) TT_C0265 PF00227 Proteasome subunit TT_C0275 PF02397 Bacterial sugar transferase TT_C0276 PF13579 Glycosyl transferase 4-like domain TT_C0276 PF00534 Glycosyl transferases group 1 TT_C0279 PF00535 Glycosyl transferase family 2 TT_C0284 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TT_C0285 PF02350 UDP-N-acetylglucosamine 2-epimerase TT_C0286 PF00132 Bacterial transferase hexapeptide (six repeats) TT_C0287 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TT_C0287 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TT_C0288 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TT_C0288 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TT_C0288 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TT_C0291 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TT_C0291 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TT_C0291 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TT_C0291 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TT_C0295 PF10609 NUBPL iron-transfer P-loop NTPase TT_C0295 PF01883 Iron-sulfur cluster assembly protein TT_C0298 PF04452 RNA methyltransferase TT_C0301 PF00106 short chain dehydrogenase TT_C0304 PF00391 PEP-utilising enzyme, mobile domain TT_C0304 PF02896 PEP-utilising enzyme, TIM barrel domain TT_C0304 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TT_C0305 PF14765 Polyketide synthase dehydratase TT_C0305 PF00550 Phosphopantetheine attachment site TT_C0305 PF08659 KR domain TT_C0305 PF02801 Beta-ketoacyl synthase, C-terminal domain TT_C0305 PF00109 Beta-ketoacyl synthase, N-terminal domain TT_C0305 PF16197 Ketoacyl-synthetase C-terminal extension TT_C0305 PF08990 Erythronolide synthase docking TT_C0305 PF08240 Alcohol dehydrogenase GroES-like domain TT_C0305 PF09277 Erythronolide synthase, docking TT_C0305 PF00698 Acyl transferase domain TT_C0306 PF00296 Luciferase-like monooxygenase TT_C0307 PF01747 ATP-sulfurylase TT_C0307 PF14306 PUA-like domain TT_C0308 PF10414 Sirohaem synthase dimerisation region TT_C0308 PF14824 Sirohaem biosynthesis protein central TT_C0308 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TT_C0309 PF01925 Sulfite exporter TauE/SafE TT_C0310 PF01507 Phosphoadenosine phosphosulfate reductase family TT_C0311 PF14824 Sirohaem biosynthesis protein central TT_C0311 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TT_C0311 PF10414 Sirohaem synthase dimerisation region TT_C0312 PF02602 Uroporphyrinogen-III synthase HemD TT_C0313 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TT_C0313 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TT_C0315 PF02581 Thiamine monophosphate synthase TT_C0316 PF02597 ThiS family TT_C0317 PF05690 Thiazole biosynthesis protein ThiG TT_C0318 PF05690 Thiazole biosynthesis protein ThiG TT_C0318 PF01266 FAD dependent oxidoreductase TT_C0319 PF01964 Radical SAM ThiC family TT_C0320 PF07690 Major Facilitator Superfamily TT_C0321 PF02581 Thiamine monophosphate synthase TT_C0321 PF08543 Phosphomethylpyrimidine kinase TT_C0326 PF00528 Binding-protein-dependent transport system inner membrane component TT_C0327 PF00528 Binding-protein-dependent transport system inner membrane component TT_C0329 PF00480 ROK family TT_C0330 PF02803 Thiolase, C-terminal domain TT_C0330 PF00108 Thiolase, N-terminal domain TT_C0331 PF00106 short chain dehydrogenase TT_C0334 PF00005 ABC transporter TT_C0335 PF00005 ABC transporter TT_C0335 PF12399 Branched-chain amino acid ATP-binding cassette transporter TT_C0337 PF02653 Branched-chain amino acid transport system / permease component TT_C0339 PF01575 MaoC like domain TT_C0340 PF00561 alpha/beta hydrolase fold TT_C0341 PF00561 alpha/beta hydrolase fold TT_C0342 PF00501 AMP-binding enzyme TT_C0342 PF13193 AMP-binding enzyme C-terminal domain TT_C0343 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TT_C0343 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TT_C0345 PF02355 Protein export membrane protein TT_C0345 PF07549 SecD/SecF GG Motif TT_C0347 PF04760 Translation initiation factor IF-2, N-terminal region TT_C0347 PF11987 Translation-initiation factor 2 TT_C0347 PF00009 Elongation factor Tu GTP binding domain TT_C0349 PF13184 NusA-like KH domain TT_C0349 PF00575 S1 RNA binding domain TT_C0349 PF08529 NusA N-terminal domain TT_C0350 PF02576 RimP N-terminal domain TT_C0350 PF17384 RimP C-terminal SH3 domain TT_C0351 PF01551 Peptidase family M23 TT_C0351 PF04225 Opacity-associated protein A LysM-like domain TT_C0352 PF01680 SOR/SNZ family TT_C0353 PF01022 Bacterial regulatory protein, arsR family TT_C0354 PF00403 Heavy-metal-associated domain TT_C0355 PF01174 SNO glutamine amidotransferase family TT_C0356 PF00152 tRNA synthetases class II (D, K and N) TT_C0356 PF01336 OB-fold nucleic acid binding domain TT_C0358 PF02567 Phenazine biosynthesis-like protein TT_C0359 PF02938 GAD domain TT_C0359 PF00152 tRNA synthetases class II (D, K and N) TT_C0359 PF01336 OB-fold nucleic acid binding domain TT_C0360 PF03129 Anticodon binding domain TT_C0360 PF13393 Histidyl-tRNA synthetase TT_C0363 PF00005 ABC transporter TT_C0364 PF00528 Binding-protein-dependent transport system inner membrane component TT_C0366 PF03167 Uracil DNA glycosylase superfamily TT_C0370 PF00815 Histidinol dehydrogenase TT_C0371 PF02540 NAD synthase TT_C0371 PF00117 Glutamine amidotransferase class-I TT_C0371 PF00958 GMP synthase C terminal domain TT_C0372 PF00082 Subtilase family TT_C0373 PF03816 Cell envelope-related transcriptional attenuator domain TT_C0374 PF00694 Aconitase C-terminal domain TT_C0374 PF00330 Aconitase family (aconitate hydratase) TT_C0377 PF00873 AcrB/AcrD/AcrF family TT_C0382 PF00571 CBS domain TT_C0382 PF01595 Cyclin M transmembrane N-terminal domain TT_C0382 PF03471 Transporter associated domain TT_C0383 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TT_C0385 PF00701 Dihydrodipicolinate synthetase family TT_C0387 PF03315 Serine dehydratase beta chain TT_C0387 PF01842 ACT domain TT_C0388 PF00672 HAMP domain TT_C0388 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TT_C0388 PF00512 His Kinase A (phospho-acceptor) domain TT_C0389 PF03144 Elongation factor Tu domain 2 TT_C0389 PF00009 Elongation factor Tu GTP binding domain TT_C0389 PF00679 Elongation factor G C-terminus TT_C0389 PF06421 GTP-binding protein LepA C-terminus TT_C0391 PF01032 FecCD transport family TT_C0392 PF00005 ABC transporter TT_C0396 PF00144 Beta-lactamase TT_C0397 PF01212 Beta-eliminating lyase TT_C0398 PF18357 Diphteria toxin repressor SH3 domain TT_C0398 PF02742 Iron dependent repressor, metal binding and dimerisation domain TT_C0398 PF01325 Iron dependent repressor, N-terminal DNA binding domain TT_C0402 PF00990 Diguanylate cyclase, GGDEF domain TT_C0404 PF13026 Protein of unknown function (DUF3887) TT_C0404 PF12146 Serine aminopeptidase, S33 TT_C0407 PF00561 alpha/beta hydrolase fold TT_C0408 PF01053 Cys/Met metabolism PLP-dependent enzyme TT_C0411 PF08240 Alcohol dehydrogenase GroES-like domain TT_C0411 PF00107 Zinc-binding dehydrogenase TT_C0413 PF03576 Peptidase family S58 TT_C0414 PF03480 Bacterial extracellular solute-binding protein, family 7 TT_C0416 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TT_C0417 PF13180 PDZ domain TT_C0418 PF00004 ATPase family associated with various cellular activities (AAA) TT_C0418 PF05362 Lon protease (S16) C-terminal proteolytic domain TT_C0418 PF02190 ATP-dependent protease La (LON) substrate-binding domain TT_C0419 PF00528 Binding-protein-dependent transport system inner membrane component TT_C0420 PF00005 ABC transporter TT_C0422 PF03707 Bacterial signalling protein N terminal repeat TT_C0422 PF00990 Diguanylate cyclase, GGDEF domain TT_C0422 PF13188 PAS domain TT_C0422 PF00563 EAL domain TT_C0424 PF01180 Dihydroorotate dehydrogenase TT_C0426 PF01979 Amidohydrolase family TT_C0427 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TT_C0427 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TT_C0428 PF00156 Phosphoribosyl transferase domain TT_C0430 PF01925 Sulfite exporter TauE/SafE TT_C0431 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TT_C0431 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TT_C0433 PF01523 Putative modulator of DNA gyrase TT_C0435 PF02770 Acyl-CoA dehydrogenase, middle domain TT_C0435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TT_C0435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TT_C0436 PF00583 Acetyltransferase (GNAT) family TT_C0438 PF04079 Segregation and condensation complex subunit ScpB TT_C0439 PF01300 Telomere recombination TT_C0439 PF03481 Putative GTP-binding controlling metal-binding TT_C0440 PF00482 Type II secretion system (T2SS), protein F TT_C0443 PF02913 FAD linked oxidases, C-terminal domain TT_C0443 PF01565 FAD binding domain TT_C0446 PF03707 Bacterial signalling protein N terminal repeat TT_C0446 PF00990 Diguanylate cyclase, GGDEF domain TT_C0446 PF00563 EAL domain TT_C0447 PF02153 Prephenate dehydrogenase TT_C0448 PF00793 DAHP synthetase I family TT_C0448 PF18152 DAHP synthase ferredoxin-like domain TT_C0449 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TT_C0450 PF04264 YceI-like domain TT_C0451 PF02621 Menaquinone biosynthesis TT_C0452 PF04055 Radical SAM superfamily TT_C0455 PF00356 Bacterial regulatory proteins, lacI family TT_C0456 PF02660 Glycerol-3-phosphate acyltransferase TT_C0457 PF01557 Fumarylacetoacetate (FAA) hydrolase family TT_C0459 PF00551 Formyl transferase TT_C0460 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TT_C0460 PF02844 Phosphoribosylglycinamide synthetase, N domain TT_C0460 PF02843 Phosphoribosylglycinamide synthetase, C domain TT_C0461 PF00929 Exonuclease TT_C0462 PF00486 Transcriptional regulatory protein, C terminal TT_C0462 PF00072 Response regulator receiver domain TT_C0463 PF00512 His Kinase A (phospho-acceptor) domain TT_C0463 PF00672 HAMP domain TT_C0463 PF01627 Hpt domain TT_C0463 PF00072 Response regulator receiver domain TT_C0463 PF17149 Periplasmic sensor domain found in signal transduction proteins TT_C0463 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TT_C0467 PF00474 Sodium:solute symporter family TT_C0469 PF01709 Transcriptional regulator TT_C0470 PF02254 TrkA-N domain TT_C0470 PF00999 Sodium/hydrogen exchanger family TT_C0471 PF13462 Thioredoxin TT_C0472 PF17284 Spermidine synthase tetramerisation domain TT_C0473 PF02675 S-adenosylmethionine decarboxylase TT_C0474 PF09397 Ftsk gamma domain TT_C0474 PF01580 FtsK/SpoIIIE family TT_C0474 PF17854 FtsK alpha domain TT_C0477 PF00571 CBS domain TT_C0479 PF01966 HD domain TT_C0479 PF12627 Probable RNA and SrmB- binding site of polymerase A TT_C0479 PF01743 Poly A polymerase head domain TT_C0481 PF02163 Peptidase family M50 TT_C0482 PF01261 Xylose isomerase-like TIM barrel TT_C0483 PF01925 Sulfite exporter TauE/SafE TT_C0484 PF00581 Rhodanese-like domain TT_C0485 PF00753 Metallo-beta-lactamase superfamily TT_C0487 PF00581 Rhodanese-like domain TT_C0488 PF08534 Redoxin TT_C0489 PF04293 SpoVR like protein TT_C0490 PF04285 Protein of unknown function (DUF444) TT_C0491 PF06798 PrkA serine protein kinase C-terminal domain TT_C0491 PF08298 PrkA AAA domain TT_C0496 PF02631 RecX family TT_C0498 PF04232 Stage V sporulation protein S (SpoVS) TT_C0499 PF01029 NusB family TT_C0499 PF01189 16S rRNA methyltransferase RsmB/F TT_C0500 PF03807 NADP oxidoreductase coenzyme F420-dependent TT_C0500 PF14748 Pyrroline-5-carboxylate reductase dimerisation TT_C0502 PF00535 Glycosyl transferase family 2 TT_C0503 PF17820 PDZ domain TT_C0503 PF02163 Peptidase family M50 TT_C0504 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TT_C0504 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TT_C0504 PF13288 DXP reductoisomerase C-terminal domain TT_C0506 PF01765 Ribosome recycling factor TT_C0507 PF00696 Amino acid kinase family TT_C0508 PF00889 Elongation factor TS TT_C0509 PF00318 Ribosomal protein S2 TT_C0511 PF00293 NUDIX domain TT_C0513 PF00171 Aldehyde dehydrogenase family TT_C0514 PF07736 Chorismate mutase type I TT_C0515 PF02585 GlcNAc-PI de-N-acetylase TT_C0517 PF01979 Amidohydrolase family TT_C0519 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TT_C0519 PF13378 Enolase C-terminal domain-like TT_C0520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TT_C0520 PF02403 Seryl-tRNA synthetase N-terminal domain TT_C0521 PF02686 Glu-tRNAGln amidotransferase C subunit TT_C0522 PF04474 Protein of unknown function (DUF554) TT_C0523 PF05430 S-adenosyl-L-methionine-dependent methyltransferase TT_C0523 PF01266 FAD dependent oxidoreductase TT_C0524 PF01522 Polysaccharide deacetylase TT_C0525 PF07690 Major Facilitator Superfamily TT_C0526 PF00535 Glycosyl transferase family 2 TT_C0527 PF13439 Glycosyltransferase Family 4 TT_C0527 PF00534 Glycosyl transferases group 1 TT_C0528 PF00535 Glycosyl transferase family 2 TT_C0529 PF03275 UDP-galactopyranose mutase TT_C0530 PF13439 Glycosyltransferase Family 4 TT_C0530 PF00534 Glycosyl transferases group 1 TT_C0531 PF01470 Pyroglutamyl peptidase TT_C0532 PF02645 Uncharacterised protein, DegV family COG1307 TT_C0533 PF17757 UvrB interaction domain TT_C0533 PF02559 CarD-like/TRCF domain TT_C0533 PF03461 TRCF domain TT_C0533 PF00271 Helicase conserved C-terminal domain TT_C0533 PF00270 DEAD/DEAH box helicase TT_C0534 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TT_C0534 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TT_C0534 PF00378 Enoyl-CoA hydratase/isomerase TT_C0535 PF00108 Thiolase, N-terminal domain TT_C0535 PF02803 Thiolase, C-terminal domain TT_C0536 PF02770 Acyl-CoA dehydrogenase, middle domain TT_C0536 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TT_C0536 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TT_C0537 PF09190 DALR domain TT_C0537 PF01406 tRNA synthetases class I (C) catalytic domain TT_C0538 PF01430 Hsp33 protein TT_C0539 PF00582 Universal stress protein family TT_C0540 PF04298 Putative neutral zinc metallopeptidase TT_C0543 PF06470 SMC proteins Flexible Hinge Domain TT_C0543 PF02463 RecF/RecN/SMC N terminal domain TT_C0545 PF11741 AMIN domain TT_C0545 PF01520 N-acetylmuramoyl-L-alanine amidase TT_C0546 PF01668 SmpB protein TT_C0547 PF00583 Acetyltransferase (GNAT) family TT_C0547 PF00795 Carbon-nitrogen hydrolase TT_C0548 PF02632 BioY family TT_C0549 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TT_C0549 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TT_C0550 PF00162 Phosphoglycerate kinase TT_C0551 PF02033 Ribosome-binding factor A TT_C0552 PF03061 Thioesterase superfamily TT_C0553 PF00202 Aminotransferase class-III TT_C0554 PF00575 S1 RNA binding domain TT_C0554 PF00773 RNB domain TT_C0554 PF17876 Cold shock domain TT_C0554 PF08206 Ribonuclease B OB domain TT_C0555 PF01875 Memo-like protein TT_C0556 PF12627 Probable RNA and SrmB- binding site of polymerase A TT_C0556 PF01743 Poly A polymerase head domain TT_C0556 PF01966 HD domain TT_C0557 PF01121 Dephospho-CoA kinase TT_C0560 PF01467 Cytidylyltransferase-like TT_C0561 PF01808 AICARFT/IMPCHase bienzyme TT_C0561 PF02142 MGS-like domain TT_C0562 PF12631 MnmE helical domain TT_C0562 PF01926 50S ribosome-binding GTPase TT_C0562 PF10396 GTP-binding protein TrmE N-terminus TT_C0563 PF02080 TrkA-C domain TT_C0563 PF00999 Sodium/hydrogen exchanger family TT_C0563 PF03471 Transporter associated domain TT_C0564 PF00202 Aminotransferase class-III TT_C0565 PF00893 Small Multidrug Resistance protein TT_C0568 PF02779 Transketolase, pyrimidine binding domain TT_C0568 PF02780 Transketolase, C-terminal domain TT_C0569 PF00676 Dehydrogenase E1 component TT_C0570 PF00155 Aminotransferase class I and II TT_C0573 PF00005 ABC transporter TT_C0581 PF00121 Triosephosphate isomerase TT_C0582 PF00487 Fatty acid desaturase TT_C0583 PF02580 D-Tyr-tRNA(Tyr) deacylase TT_C0584 PF02645 Uncharacterised protein, DegV family COG1307 TT_C0585 PF02645 Uncharacterised protein, DegV family COG1307 TT_C0586 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TT_C0586 PF01842 ACT domain TT_C0586 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TT_C0590 PF17853 GGDEF-like domain TT_C0590 PF13556 PucR C-terminal helix-turn-helix domain TT_C0591 PF00701 Dihydrodipicolinate synthetase family TT_C0592 PF01557 Fumarylacetoacetate (FAA) hydrolase family TT_C0593 PF00171 Aldehyde dehydrogenase family TT_C0594 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal TT_C0594 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal TT_C0595 PF01613 Flavin reductase like domain TT_C0596 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TT_C0598 PF02653 Branched-chain amino acid transport system / permease component TT_C0599 PF12399 Branched-chain amino acid ATP-binding cassette transporter TT_C0599 PF00005 ABC transporter TT_C0600 PF00005 ABC transporter TT_C0601 PF03061 Thioesterase superfamily TT_C0602 PF14535 AMP-binding enzyme C-terminal domain TT_C0602 PF00501 AMP-binding enzyme TT_C0604 PF01575 MaoC like domain TT_C0604 PF00171 Aldehyde dehydrogenase family TT_C0608 PF05138 Phenylacetic acid catabolic protein TT_C0610 PF00589 Phage integrase family TT_C0610 PF02899 Phage integrase, N-terminal SAM-like domain TT_C0611 PF08402 TOBE domain TT_C0611 PF00005 ABC transporter TT_C0612 PF00528 Binding-protein-dependent transport system inner membrane component TT_C0613 PF00528 Binding-protein-dependent transport system inner membrane component TT_C0616 PF01950 Fructose-1,6-bisphosphatase TT_C0617 PF01638 HxlR-like helix-turn-helix TT_C0618 PF00210 Ferritin-like domain TT_C0619 PF00890 FAD binding domain TT_C0619 PF02910 Fumarate reductase flavoprotein C-term TT_C0620 PF02445 Quinolinate synthetase A protein TT_C0621 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TT_C0621 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TT_C0622 PF03190 Protein of unknown function, DUF255 TT_C0623 PF02803 Thiolase, C-terminal domain TT_C0623 PF00108 Thiolase, N-terminal domain TT_C0624 PF02682 Carboxyltransferase domain, subdomain C and D TT_C0625 PF07690 Major Facilitator Superfamily TT_C0626 PF01047 MarR family TT_C0627 PF00990 Diguanylate cyclase, GGDEF domain TT_C0627 PF07694 5TMR of 5TMR-LYT TT_C0628 PF00563 EAL domain TT_C0628 PF08448 PAS fold TT_C0628 PF00990 Diguanylate cyclase, GGDEF domain TT_C0629 PF00072 Response regulator receiver domain TT_C0630 PF00294 pfkB family carbohydrate kinase TT_C0633 PF00072 Response regulator receiver domain TT_C0633 PF00486 Transcriptional regulatory protein, C terminal TT_C0634 PF00171 Aldehyde dehydrogenase family TT_C0636 PF02541 Ppx/GppA phosphatase family TT_C0637 PF02503 Polyphosphate kinase middle domain TT_C0637 PF13090 Polyphosphate kinase C-terminal domain 2 TT_C0637 PF17941 Polyphosphate kinase C-terminal domain 1 TT_C0637 PF13089 Polyphosphate kinase N-terminal domain TT_C0638 PF00580 UvrD/REP helicase N-terminal domain TT_C0638 PF13361 UvrD-like helicase C-terminal domain TT_C0642 PF02424 ApbE family TT_C0643 PF00072 Response regulator receiver domain TT_C0643 PF00486 Transcriptional regulatory protein, C terminal TT_C0644 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TT_C0644 PF00512 His Kinase A (phospho-acceptor) domain TT_C0644 PF00672 HAMP domain TT_C0647 PF13533 Biotin-lipoyl like TT_C0648 PF00005 ABC transporter TT_C0649 PF12704 MacB-like periplasmic core domain TT_C0649 PF02687 FtsX-like permease family TT_C0649 PF00005 ABC transporter TT_C0664 PF12728 Helix-turn-helix domain TT_C0665 PF14659 Phage integrase, N-terminal SAM-like domain TT_C0665 PF00589 Phage integrase family TT_C0666 PF00581 Rhodanese-like domain TT_C0667 PF03313 Serine dehydratase alpha chain TT_C0668 PF00072 Response regulator receiver domain TT_C0668 PF00196 Bacterial regulatory proteins, luxR family TT_C0669 PF01245 Ribosomal protein L19 TT_C0670 PF01746 tRNA (Guanine-1)-methyltransferase TT_C0671 PF05239 PRC-barrel domain TT_C0671 PF01782 RimM N-terminal domain TT_C0673 PF00886 Ribosomal protein S16 TT_C0674 PF02978 Signal peptide binding domain TT_C0674 PF00448 SRP54-type protein, GTPase domain TT_C0674 PF02881 SRP54-type protein, helical bundle domain TT_C0676 PF02310 B12 binding domain TT_C0678 PF01545 Cation efflux family TT_C0678 PF16916 Dimerisation domain of Zinc Transporter TT_C0679 PF01336 OB-fold nucleic acid binding domain TT_C0679 PF00152 tRNA synthetases class II (D, K and N) TT_C0680 PF01272 Transcription elongation factor, GreA/GreB, C-term TT_C0680 PF03449 Transcription elongation factor, N-terminal TT_C0682 PF01219 Prokaryotic diacylglycerol kinase TT_C0683 PF02130 Uncharacterized protein family UPF0054 TT_C0684 PF02562 PhoH-like protein TT_C0686 PF12127 SigmaW regulon antibacterial TT_C0688 PF08501 Shikimate dehydrogenase substrate binding domain TT_C0688 PF01488 Shikimate / quinate 5-dehydrogenase TT_C0688 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TT_C0689 PF01205 Uncharacterized protein family UPF0029 TT_C0690 PF09281 Taq polymerase, exonuclease TT_C0690 PF00476 DNA polymerase family A TT_C0690 PF01367 5'-3' exonuclease, C-terminal SAM fold TT_C0690 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TT_C0691 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TT_C0691 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TT_C0691 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TT_C0691 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TT_C0693 PF02547 Queuosine biosynthesis protein TT_C0694 PF03747 ADP-ribosylglycohydrolase TT_C0695 PF00571 CBS domain TT_C0695 PF01769 Divalent cation transporter TT_C0695 PF03448 MgtE intracellular N domain TT_C0697 PF00925 GTP cyclohydrolase II TT_C0697 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TT_C0698 PF00677 Lumazine binding domain TT_C0699 PF01872 RibD C-terminal domain TT_C0699 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TT_C0700 PF07498 Rho termination factor, N-terminal domain TT_C0700 PF07497 Rho termination factor, RNA-binding domain TT_C0700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TT_C0701 PF00923 Transaldolase/Fructose-6-phosphate aldolase TT_C0702 PF08264 Anticodon-binding domain of tRNA TT_C0702 PF00133 tRNA synthetases class I (I, L, M and V) TT_C0703 PF01321 Creatinase/Prolidase N-terminal domain TT_C0703 PF00557 Metallopeptidase family M24 TT_C0705 PF01551 Peptidase family M23 TT_C0707 PF01008 Initiation factor 2 subunit family TT_C0708 PF01197 Ribosomal protein L31 TT_C0710 PF02381 MraZ protein, putative antitoxin-like TT_C0711 PF01795 MraW methylase family TT_C0713 PF03793 PASTA domain TT_C0713 PF03717 Penicillin-binding Protein dimerisation domain TT_C0713 PF00905 Penicillin binding protein transpeptidase domain TT_C0714 PF08245 Mur ligase middle domain TT_C0714 PF01225 Mur ligase family, catalytic domain TT_C0714 PF02875 Mur ligase family, glutamate ligase domain TT_C0716 PF00953 Glycosyl transferase family 4 TT_C0717 PF02875 Mur ligase family, glutamate ligase domain TT_C0717 PF08245 Mur ligase middle domain TT_C0718 PF01098 Cell cycle protein TT_C0719 PF04101 Glycosyltransferase family 28 C-terminal domain TT_C0719 PF03033 Glycosyltransferase family 28 N-terminal domain TT_C0720 PF08245 Mur ligase middle domain TT_C0720 PF02875 Mur ligase family, glutamate ligase domain TT_C0720 PF01225 Mur ligase family, catalytic domain TT_C0721 PF01565 FAD binding domain TT_C0721 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TT_C0723 PF02491 SHS2 domain inserted in FTSA TT_C0724 PF00091 Tubulin/FtsZ family, GTPase domain TT_C0724 PF12327 FtsZ family, C-terminal domain TT_C0725 PF02075 Crossover junction endodeoxyribonuclease RuvC TT_C0727 PF04055 Radical SAM superfamily TT_C0729 PF00290 Tryptophan synthase alpha chain TT_C0730 PF00291 Pyridoxal-phosphate dependent enzyme TT_C0731 PF02511 Thymidylate synthase complementing protein TT_C0732 PF03120 NAD-dependent DNA ligase OB-fold domain TT_C0732 PF12826 Helix-hairpin-helix motif TT_C0732 PF01653 NAD-dependent DNA ligase adenylation domain TT_C0732 PF00533 BRCA1 C Terminus (BRCT) domain TT_C0745 PF13439 Glycosyltransferase Family 4 TT_C0745 PF00534 Glycosyl transferases group 1 TT_C0746 PF00004 ATPase family associated with various cellular activities (AAA) TT_C0746 PF05362 Lon protease (S16) C-terminal proteolytic domain TT_C0746 PF02190 ATP-dependent protease La (LON) substrate-binding domain TT_C0748 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TT_C0748 PF00056 lactate/malate dehydrogenase, NAD binding domain TT_C0749 PF00756 Putative esterase TT_C0750 PF03741 Integral membrane protein TerC family TT_C0752 PF13183 4Fe-4S dicluster domain TT_C0752 PF02754 Cysteine-rich domain TT_C0754 PF02681 Divergent PAP2 family TT_C0755 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TT_C0755 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TT_C0756 PF01029 NusB family TT_C0758 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TT_C0758 PF00289 Biotin carboxylase, N-terminal domain TT_C0758 PF02785 Biotin carboxylase C-terminal domain TT_C0759 PF00364 Biotin-requiring enzyme TT_C0760 PF09285 Elongation factor P, C-terminal TT_C0760 PF01132 Elongation factor P (EF-P) OB domain TT_C0760 PF08207 Elongation factor P (EF-P) KOW-like domain TT_C0764 PF00491 Arginase family TT_C0767 PF00025 ADP-ribosylation factor family TT_C0768 PF08113 Cytochrome c oxidase subunit IIa family TT_C0769 PF09125 Cytochrome C oxidase subunit II, transmembrane TT_C0769 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TT_C0770 PF00115 Cytochrome C and Quinol oxidase polypeptide I TT_C0772 PF07690 Major Facilitator Superfamily TT_C0773 PF00312 Ribosomal protein S15 TT_C0774 PF03725 3' exoribonuclease family, domain 2 TT_C0774 PF00575 S1 RNA binding domain TT_C0774 PF00013 KH domain TT_C0774 PF01138 3' exoribonuclease family, domain 1 TT_C0774 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TT_C0775 PF12706 Beta-lactamase superfamily domain TT_C0775 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TT_C0775 PF17770 Ribonuclease J C-terminal domain TT_C0776 PF00690 Cation transporter/ATPase, N-terminus TT_C0776 PF00689 Cation transporting ATPase, C-terminus TT_C0777 PF00486 Transcriptional regulatory protein, C terminal TT_C0777 PF00072 Response regulator receiver domain TT_C0778 PF16736 Single Cache-like TT_C0778 PF00989 PAS fold TT_C0778 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TT_C0778 PF00512 His Kinase A (phospho-acceptor) domain TT_C0779 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TT_C0779 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TT_C0779 PF02770 Acyl-CoA dehydrogenase, middle domain TT_C0780 PF01012 Electron transfer flavoprotein domain TT_C0781 PF00766 Electron transfer flavoprotein FAD-binding domain TT_C0781 PF01012 Electron transfer flavoprotein domain TT_C0783 PF01039 Carboxyl transferase domain TT_C0784 PF03167 Uracil DNA glycosylase superfamily TT_C0785 PF14791 DNA polymerase beta thumb TT_C0785 PF14716 Helix-hairpin-helix domain TT_C0785 PF02811 PHP domain TT_C0788 PF02073 Thermophilic metalloprotease (M29) TT_C0789 PF07992 Pyridine nucleotide-disulphide oxidoreductase TT_C0789 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TT_C0789 PF00403 Heavy-metal-associated domain TT_C0791 PF13411 MerR HTH family regulatory protein TT_C0792 PF01053 Cys/Met metabolism PLP-dependent enzyme TT_C0793 PF16868 NMT1-like family TT_C0795 PF00005 ABC transporter TT_C0797 PF01734 Patatin-like phospholipase TT_C0798 PF12728 Helix-turn-helix domain TT_C0800 PF00218 Indole-3-glycerol phosphate synthase TT_C0801 PF00977 Histidine biosynthesis protein TT_C0803 PF01368 DHH family TT_C0803 PF17768 RecJ OB domain TT_C0803 PF02272 DHHA1 domain TT_C0805 PF10458 Valyl tRNA synthetase tRNA binding arm TT_C0805 PF08264 Anticodon-binding domain of tRNA TT_C0805 PF00133 tRNA synthetases class I (I, L, M and V) TT_C0806 PF00528 Binding-protein-dependent transport system inner membrane component TT_C0807 PF00497 Bacterial extracellular solute-binding proteins, family 3 TT_C0808 PF11897 Protein of unknown function (DUF3417) TT_C0808 PF00343 Carbohydrate phosphorylase TT_C0809 PF02386 Cation transport protein TT_C0810 PF02080 TrkA-C domain TT_C0810 PF02254 TrkA-N domain TT_C0811 PF18693 TRAM domain TT_C0811 PF04055 Radical SAM superfamily TT_C0811 PF00919 Uncharacterized protein family UPF0004 TT_C0812 PF13464 Domain of unknown function (DUF4115) TT_C0813 PF04227 Indigoidine synthase A like protein TT_C0816 PF01451 Low molecular weight phosphotyrosine protein phosphatase TT_C0817 PF07730 Histidine kinase TT_C0817 PF17200 Single Cache domain 2 TT_C0818 PF00588 SpoU rRNA Methylase family TT_C0819 PF17092 Penicillin-binding protein OB-like domain TT_C0819 PF00905 Penicillin binding protein transpeptidase domain TT_C0819 PF00912 Transglycosylase TT_C0822 PF01926 50S ribosome-binding GTPase TT_C0822 PF06071 Protein of unknown function (DUF933) TT_C0823 PF01791 DeoC/LacD family aldolase TT_C0825 PF02545 Maf-like protein TT_C0828 PF00905 Penicillin binding protein transpeptidase domain TT_C0828 PF03717 Penicillin-binding Protein dimerisation domain TT_C0835 PF01960 ArgJ family TT_C0836 PF02774 Semialdehyde dehydrogenase, dimerisation domain TT_C0836 PF01118 Semialdehyde dehydrogenase, NAD binding domain TT_C0838 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TT_C0838 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TT_C0841 PF02660 Glycerol-3-phosphate acyltransferase TT_C0843 PF00005 ABC transporter TT_C0847 PF00682 HMGL-like TT_C0847 PF08502 LeuA allosteric (dimerisation) domain TT_C0849 PF00682 HMGL-like TT_C0849 PF08502 LeuA allosteric (dimerisation) domain TT_C0850 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TT_C0850 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TT_C0851 PF10369 Small subunit of acetolactate synthase TT_C0852 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TT_C0852 PF00205 Thiamine pyrophosphate enzyme, central domain TT_C0852 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TT_C0858 PF07963 Prokaryotic N-terminal methylation motif TT_C0858 PF08334 Type II secretion system (T2SS), protein G TT_C0860 PF05685 Putative restriction endonuclease TT_C0864 PF00579 tRNA synthetases class I (W and Y) TT_C0865 PF00330 Aconitase family (aconitate hydratase) TT_C0866 PF00694 Aconitase C-terminal domain TT_C0867 PF00180 Isocitrate/isopropylmalate dehydrogenase TT_C0870 PF00106 short chain dehydrogenase TT_C0871 PF00920 Dehydratase family TT_C0873 PF13416 Bacterial extracellular solute-binding protein TT_C0874 PF00528 Binding-protein-dependent transport system inner membrane component TT_C0875 PF00528 Binding-protein-dependent transport system inner membrane component TT_C0876 PF00005 ABC transporter TT_C0876 PF08402 TOBE domain TT_C0877 PF01098 Cell cycle protein TT_C0878 PF03776 Septum formation topological specificity factor MinE TT_C0879 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TT_C0880 PF01638 HxlR-like helix-turn-helix TT_C0884 PF00501 AMP-binding enzyme TT_C0884 PF16177 Acetyl-coenzyme A synthetase N-terminus TT_C0884 PF13193 AMP-binding enzyme C-terminal domain TT_C0885 PF00501 AMP-binding enzyme TT_C0885 PF13193 AMP-binding enzyme C-terminal domain TT_C0885 PF16177 Acetyl-coenzyme A synthetase N-terminus TT_C0886 PF00501 AMP-binding enzyme TT_C0886 PF13193 AMP-binding enzyme C-terminal domain TT_C0886 PF16177 Acetyl-coenzyme A synthetase N-terminus TT_C0887 PF07517 SecA DEAD-like domain TT_C0887 PF07516 SecA Wing and Scaffold domain TT_C0887 PF01043 SecA preprotein cross-linking domain TT_C0888 PF00814 Glycoprotease family TT_C0892 PF01906 Putative heavy-metal-binding TT_C0893 PF00271 Helicase conserved C-terminal domain TT_C0893 PF00270 DEAD/DEAH box helicase TT_C0893 PF09369 Domain of unknown function (DUF1998) TT_C0895 PF16701 Adenylate cyclase regulatory domain TT_C0895 PF00211 Adenylate and Guanylate cyclase catalytic domain TT_C0896 PF08275 DNA primase catalytic core, N-terminal domain TT_C0896 PF01807 CHC2 zinc finger TT_C0896 PF13662 Toprim domain TT_C0897 PF02446 4-alpha-glucanotransferase TT_C0898 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TT_C0898 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TT_C0899 PF00892 EamA-like transporter family TT_C0900 PF05193 Peptidase M16 inactive domain TT_C0900 PF00675 Insulinase (Peptidase family M16) TT_C0901 PF05193 Peptidase M16 inactive domain TT_C0902 PF17191 RecG wedge domain TT_C0902 PF00270 DEAD/DEAH box helicase TT_C0902 PF00271 Helicase conserved C-terminal domain TT_C0905 PF01813 ATP synthase subunit D TT_C0906 PF02874 ATP synthase alpha/beta family, beta-barrel domain TT_C0906 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TT_C0907 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TT_C0907 PF16886 ATPsynthase alpha/beta subunit N-term extension TT_C0907 PF02874 ATP synthase alpha/beta family, beta-barrel domain TT_C0908 PF01990 ATP synthase (F/14-kDa) subunit TT_C0909 PF01992 ATP synthase (C/AC39) subunit TT_C0910 PF01991 ATP synthase (E/31 kDa) subunit TT_C0912 PF01496 V-type ATPase 116kDa subunit family TT_C0912 PF18670 V-type ATPase subunit I, N-terminal domain TT_C0914 PF10672 S-adenosylmethionine-dependent methyltransferase TT_C0914 PF17785 PUA-like domain TT_C0918 PF00069 Protein kinase domain TT_C0918 PF00211 Adenylate and Guanylate cyclase catalytic domain TT_C0919 PF16177 Acetyl-coenzyme A synthetase N-terminus TT_C0919 PF13193 AMP-binding enzyme C-terminal domain TT_C0919 PF00501 AMP-binding enzyme TT_C0920 PF03023 Lipid II flippase MurJ TT_C0922 PF13476 AAA domain TT_C0923 PF00149 Calcineurin-like phosphoesterase TT_C0923 PF12320 Type 5 capsule protein repressor C-terminal domain TT_C0927 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TT_C0927 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus TT_C0928 PF00005 ABC transporter TT_C0929 PF03572 Peptidase family S41 TT_C0929 PF01471 Putative peptidoglycan binding domain TT_C0929 PF17820 PDZ domain TT_C0931 PF01588 Putative tRNA binding domain TT_C0931 PF09334 tRNA synthetases class I (M) TT_C0931 PF00133 tRNA synthetases class I (I, L, M and V) TT_C0932 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) TT_C0933 PF00578 AhpC/TSA family TT_C0934 PF02608 ABC transporter substrate-binding protein PnrA-like TT_C0938 PF00005 ABC transporter TT_C0939 PF12804 MobA-like NTP transferase domain TT_C0942 PF04055 Radical SAM superfamily TT_C0942 PF01938 TRAM domain TT_C0942 PF00919 Uncharacterized protein family UPF0004 TT_C0947 PF00953 Glycosyl transferase family 4 TT_C0948 PF02350 UDP-N-acetylglucosamine 2-epimerase TT_C0950 PF02163 Peptidase family M50 TT_C0950 PF00571 CBS domain TT_C0951 PF16868 NMT1-like family TT_C0953 PF16868 NMT1-like family TT_C0956 PF13180 PDZ domain TT_C0957 PF00551 Formyl transferase TT_C0957 PF01842 ACT domain TT_C0958 PF03737 Aldolase/RraA TT_C0959 PF01119 DNA mismatch repair protein, C-terminal domain TT_C0959 PF08676 MutL C terminal dimerisation domain TT_C0960 PF00488 MutS domain V TT_C0960 PF01624 MutS domain I TT_C0960 PF05188 MutS domain II TT_C0960 PF05192 MutS domain III TT_C0960 PF05190 MutS family domain IV TT_C0962 PF00034 Cytochrome c TT_C0964 PF00149 Calcineurin-like phosphoesterase TT_C0964 PF02872 5'-nucleotidase, C-terminal domain TT_C0965 PF03951 Glutamine synthetase, beta-Grasp domain TT_C0965 PF00120 Glutamine synthetase, catalytic domain TT_C0966 PF13458 Periplasmic binding protein TT_C0967 PF02653 Branched-chain amino acid transport system / permease component TT_C0968 PF02653 Branched-chain amino acid transport system / permease component TT_C0968 PF11862 Domain of unknown function (DUF3382) TT_C0969 PF00005 ABC transporter TT_C0969 PF12399 Branched-chain amino acid ATP-binding cassette transporter TT_C0970 PF00005 ABC transporter TT_C0971 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TT_C0975 PF08245 Mur ligase middle domain TT_C0976 PF00005 ABC transporter TT_C0976 PF00664 ABC transporter transmembrane region TT_C0977 PF00664 ABC transporter transmembrane region TT_C0977 PF00005 ABC transporter TT_C0978 PF00285 Citrate synthase, C-terminal domain TT_C0979 PF00899 ThiF family TT_C0980 PF01238 Phosphomannose isomerase type I TT_C0982 PF04493 Endonuclease V TT_C0984 PF00216 Bacterial DNA-binding protein TT_C0987 PF00072 Response regulator receiver domain TT_C0987 PF00196 Bacterial regulatory proteins, luxR family TT_C0988 PF05958 tRNA (Uracil-5-)-methyltransferase TT_C0989 PF01220 Dehydroquinase class II TT_C0990 PF00521 DNA gyrase/topoisomerase IV, subunit A TT_C0990 PF03989 DNA gyrase C-terminal domain, beta-propeller TT_C0991 PF03091 CutA1 divalent ion tolerance protein TT_C0994 PF00027 Cyclic nucleotide-binding domain TT_C0994 PF13545 Crp-like helix-turn-helix domain TT_C0997 PF00486 Transcriptional regulatory protein, C terminal TT_C0997 PF00072 Response regulator receiver domain TT_C0998 PF00512 His Kinase A (phospho-acceptor) domain TT_C0998 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TT_C0998 PF00672 HAMP domain TT_C1000 PF02754 Cysteine-rich domain TT_C1001 PF02589 LUD domain TT_C1001 PF11870 Domain of unknown function (DUF3390) TT_C1001 PF13183 4Fe-4S dicluster domain TT_C1002 PF02589 LUD domain TT_C1003 PF10502 Signal peptidase, peptidase S26 TT_C1004 PF01734 Patatin-like phospholipase TT_C1005 PF03793 PASTA domain TT_C1005 PF00069 Protein kinase domain TT_C1006 PF01520 N-acetylmuramoyl-L-alanine amidase TT_C1008 PF03309 Type III pantothenate kinase TT_C1010 PF00072 Response regulator receiver domain TT_C1012 PF00180 Isocitrate/isopropylmalate dehydrogenase TT_C1017 PF03958 Bacterial type II/III secretion system short domain TT_C1017 PF00263 Bacterial type II and III secretion system protein TT_C1018 PF01264 Chorismate synthase TT_C1019 PF01202 Shikimate kinase TT_C1020 PF01761 3-dehydroquinate synthase TT_C1021 PF17126 RsmF rRNA methyltransferase first C-terminal domain TT_C1021 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF TT_C1021 PF01189 16S rRNA methyltransferase RsmB/F TT_C1022 PF01648 4'-phosphopantetheinyl transferase superfamily TT_C1025 PF01926 50S ribosome-binding GTPase TT_C1025 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TT_C1026 PF02146 Sir2 family TT_C1027 PF01256 Carbohydrate kinase TT_C1027 PF03853 YjeF-related protein N-terminus TT_C1028 PF00288 GHMP kinases N terminal domain TT_C1028 PF08544 GHMP kinases C terminal TT_C1030 PF17070 30S ribosomal protein Thx TT_C1031 PF01649 Ribosomal protein S20 TT_C1033 PF00579 tRNA synthetases class I (W and Y) TT_C1034 PF00355 Rieske [2Fe-2S] domain TT_C1036 PF03918 Cytochrome C biogenesis protein TT_C1037 PF08534 Redoxin TT_C1038 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal TT_C1038 PF01578 Cytochrome C assembly protein TT_C1039 PF03100 CcmE TT_C1041 PF01578 Cytochrome C assembly protein TT_C1042 PF03379 CcmB protein TT_C1043 PF00005 ABC transporter TT_C1044 PF02683 Cytochrome C biogenesis protein transmembrane region TT_C1045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TT_C1046 PF00174 Oxidoreductase molybdopterin binding domain TT_C1047 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding TT_C1047 PF07992 Pyridine nucleotide-disulphide oxidoreductase TT_C1047 PF10518 TAT (twin-arginine translocation) pathway signal sequence TT_C1052 PF00149 Calcineurin-like phosphoesterase TT_C1052 PF02872 5'-nucleotidase, C-terminal domain TT_C1058 PF00034 Cytochrome c TT_C1059 PF00005 ABC transporter TT_C1059 PF08402 TOBE domain TT_C1062 PF00580 UvrD/REP helicase N-terminal domain TT_C1062 PF13361 UvrD-like helicase C-terminal domain TT_C1063 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TT_C1063 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TT_C1063 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TT_C1063 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TT_C1065 PF13193 AMP-binding enzyme C-terminal domain TT_C1065 PF00501 AMP-binding enzyme TT_C1066 PF07311 Dodecin TT_C1069 PF00378 Enoyl-CoA hydratase/isomerase TT_C1070 PF01048 Phosphorylase superfamily TT_C1071 PF00005 ABC transporter TT_C1072 PF13545 Crp-like helix-turn-helix domain TT_C1072 PF00027 Cyclic nucleotide-binding domain TT_C1073 PF04029 2-phosphosulpholactate phosphatase TT_C1075 PF17755 UvrA DNA-binding domain TT_C1075 PF00005 ABC transporter TT_C1075 PF17760 UvrA interaction domain TT_C1077 PF01134 Glucose inhibited division protein A TT_C1079 PF00977 Histidine biosynthesis protein TT_C1080 PF01502 Phosphoribosyl-AMP cyclohydrolase TT_C1080 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TT_C1081 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded TT_C1082 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TT_C1082 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TT_C1083 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain TT_C1083 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain TT_C1084 PF01026 TatD related DNase TT_C1085 PF13091 PLD-like domain TT_C1085 PF13396 Phospholipase_D-nuclease N-terminal TT_C1087 PF00152 tRNA synthetases class II (D, K and N) TT_C1087 PF01336 OB-fold nucleic acid binding domain TT_C1089 PF13085 2Fe-2S iron-sulfur cluster binding domain TT_C1090 PF02910 Fumarate reductase flavoprotein C-term TT_C1090 PF00890 FAD binding domain TT_C1092 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TT_C1093 PF02675 S-adenosylmethionine decarboxylase TT_C1095 PF00005 ABC transporter TT_C1098 PF01738 Dienelactone hydrolase family TT_C1098 PF00156 Phosphoribosyl transferase domain TT_C1099 PF13193 AMP-binding enzyme C-terminal domain TT_C1099 PF00501 AMP-binding enzyme TT_C1100 PF00380 Ribosomal protein S9/S16 TT_C1101 PF00572 Ribosomal protein L13 TT_C1102 PF06418 CTP synthase N-terminus TT_C1102 PF00117 Glutamine amidotransferase class-I TT_C1104 PF01493 GXGXG motif TT_C1104 PF01645 Conserved region in glutamate synthase TT_C1104 PF00310 Glutamine amidotransferases class-II TT_C1104 PF04898 Glutamate synthase central domain TT_C1105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TT_C1106 PF03796 DnaB-like helicase C terminal domain TT_C1106 PF00772 DnaB-like helicase N terminal domain TT_C1107 PF01464 Transglycosylase SLT domain TT_C1108 PF00999 Sodium/hydrogen exchanger family TT_C1109 PF00571 CBS domain TT_C1109 PF00478 IMP dehydrogenase / GMP reductase domain TT_C1112 PF00999 Sodium/hydrogen exchanger family TT_C1113 PF02080 TrkA-C domain TT_C1115 PF09123 Domain of unknown function (DUF1931) TT_C1117 PF00085 Thioredoxin TT_C1123 PF10431 C-terminal, D2-small domain, of ClpB protein TT_C1123 PF02861 Clp amino terminal domain, pathogenicity island component TT_C1123 PF07724 AAA domain (Cdc48 subfamily) TT_C1123 PF17871 AAA lid domain TT_C1123 PF00004 ATPase family associated with various cellular activities (AAA) TT_C1125 PF01556 DnaJ C terminal domain TT_C1125 PF00226 DnaJ domain TT_C1126 PF01025 GrpE TT_C1127 PF00012 Hsp70 protein TT_C1128 PF00004 ATPase family associated with various cellular activities (AAA) TT_C1128 PF17862 AAA+ lid domain TT_C1128 PF06480 FtsH Extracellular TT_C1128 PF01434 Peptidase family M41 TT_C1129 PF10672 S-adenosylmethionine-dependent methyltransferase TT_C1129 PF17785 PUA-like domain TT_C1130 PF01343 Peptidase family S49 TT_C1132 PF00491 Arginase family TT_C1133 PF14464 Prokaryotic homologs of the JAB domain TT_C1134 PF00009 Elongation factor Tu GTP binding domain TT_C1134 PF00679 Elongation factor G C-terminus TT_C1134 PF03144 Elongation factor Tu domain 2 TT_C1134 PF03764 Elongation factor G, domain IV TT_C1134 PF14492 Elongation Factor G, domain II TT_C1135 PF07726 ATPase family associated with various cellular activities (AAA) TT_C1135 PF17863 AAA lid domain TT_C1136 PF02896 PEP-utilising enzyme, TIM barrel domain TT_C1136 PF00391 PEP-utilising enzyme, mobile domain TT_C1136 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TT_C1137 PF03006 Haemolysin-III related TT_C1138 PF00486 Transcriptional regulatory protein, C terminal TT_C1138 PF00072 Response regulator receiver domain TT_C1139 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TT_C1139 PF00672 HAMP domain TT_C1139 PF00512 His Kinase A (phospho-acceptor) domain TT_C1142 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain TT_C1142 PF01488 Shikimate / quinate 5-dehydrogenase TT_C1144 PF02627 Carboxymuconolactone decarboxylase family TT_C1145 PF13419 Haloacid dehalogenase-like hydrolase TT_C1149 PF00206 Lyase TT_C1149 PF10397 Adenylosuccinate lyase C-terminus TT_C1151 PF01259 SAICAR synthetase TT_C1155 PF00586 AIR synthase related protein, N-terminal domain TT_C1155 PF02769 AIR synthase related protein, C-terminal domain TT_C1155 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TT_C1156 PF00156 Phosphoribosyl transferase domain TT_C1156 PF13537 Glutamine amidotransferase domain TT_C1157 PF02926 THUMP domain TT_C1157 PF01170 Putative RNA methylase family UPF0020 TT_C1158 PF00350 Dynamin family TT_C1160 PF00464 Serine hydroxymethyltransferase TT_C1161 PF02463 RecF/RecN/SMC N terminal domain TT_C1162 PF00682 HMGL-like TT_C1163 PF00107 Zinc-binding dehydrogenase TT_C1163 PF08240 Alcohol dehydrogenase GroES-like domain TT_C1167 PF01142 tRNA pseudouridine synthase D (TruD) TT_C1169 PF02371 Transposase IS116/IS110/IS902 family TT_C1169 PF01548 Transposase TT_C1170 PF01867 CRISPR associated protein Cas1 TT_C1171 PF00773 RNB domain TT_C1172 PF18324 Hypothetical protein TT1725 TT_C1172 PF00180 Isocitrate/isopropylmalate dehydrogenase TT_C1173 PF01266 FAD dependent oxidoreductase TT_C1176 PF14437 MafB19-like deaminase TT_C1176 PF01171 PP-loop family TT_C1180 PF03061 Thioesterase superfamily TT_C1182 PF08459 UvrC Helix-hairpin-helix N-terminal TT_C1182 PF02151 UvrB/uvrC motif TT_C1184 PF14572 Phosphoribosyl synthetase-associated domain TT_C1184 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TT_C1185 PF01048 Phosphorylase superfamily TT_C1186 PF02664 S-Ribosylhomocysteinase (LuxS) TT_C1187 PF00958 GMP synthase C terminal domain TT_C1187 PF00117 Glutamine amidotransferase class-I TT_C1189 PF08734 GYD domain TT_C1191 PF00075 RNase H TT_C1192 PF01039 Carboxyl transferase domain TT_C1193 PF01914 MarC family integral membrane protein TT_C1194 PF02863 Arginine repressor, C-terminal domain TT_C1194 PF01316 Arginine repressor, DNA binding domain TT_C1195 PF02441 Flavoprotein TT_C1195 PF04127 DNA / pantothenate metabolism flavoprotein TT_C1196 PF01192 RNA polymerase Rpb6 TT_C1197 PF00625 Guanylate kinase TT_C1198 PF16657 Maltogenic Amylase, C-terminal domain TT_C1198 PF02903 Alpha amylase, N-terminal ig-like domain TT_C1198 PF00128 Alpha amylase, catalytic domain TT_C1199 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TT_C1200 PF08486 Stage II sporulation protein TT_C1201 PF10079 Bacillithiol biosynthesis BshC TT_C1202 PF13545 Crp-like helix-turn-helix domain TT_C1202 PF00027 Cyclic nucleotide-binding domain TT_C1203 PF02621 Menaquinone biosynthesis TT_C1205 PF01916 Deoxyhypusine synthase TT_C1209 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TT_C1211 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TT_C1211 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TT_C1212 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TT_C1212 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TT_C1213 PF00171 Aldehyde dehydrogenase family TT_C1214 PF01619 Proline dehydrogenase TT_C1215 PF07729 FCD domain TT_C1215 PF00392 Bacterial regulatory proteins, gntR family TT_C1219 PF00155 Aminotransferase class I and II TT_C1220 PF07669 Eco57I restriction-modification methylase TT_C1220 PF12950 TaqI-like C-terminal specificity domain TT_C1222 PF01751 Toprim domain TT_C1222 PF00986 DNA gyrase B subunit, carboxyl terminus TT_C1222 PF00204 DNA gyrase B TT_C1222 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TT_C1223 PF07478 D-ala D-ala ligase C-terminus TT_C1223 PF01820 D-ala D-ala ligase N-terminus TT_C1224 PF01195 Peptidyl-tRNA hydrolase TT_C1225 PF14693 Ribosomal protein TL5, C-terminal domain TT_C1225 PF01386 Ribosomal L25p family TT_C1228 PF00989 PAS fold TT_C1228 PF11808 Phosphate regulon sensor protein PhoR TT_C1228 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TT_C1228 PF00512 His Kinase A (phospho-acceptor) domain TT_C1229 PF00486 Transcriptional regulatory protein, C terminal TT_C1229 PF00072 Response regulator receiver domain TT_C1230 PF03793 PASTA domain TT_C1230 PF00069 Protein kinase domain TT_C1234 PF00490 Delta-aminolevulinic acid dehydratase TT_C1235 PF02575 YbaB/EbfC DNA-binding family TT_C1236 PF02132 RecR protein TT_C1236 PF13662 Toprim domain TT_C1241 PF00326 Prolyl oligopeptidase family TT_C1241 PF07676 WD40-like Beta Propeller Repeat TT_C1242 PF01784 NIF3 (NGG1p interacting factor 3) TT_C1243 PF02223 Thymidylate kinase TT_C1247 PF01812 5-formyltetrahydrofolate cyclo-ligase family TT_C1248 PF13419 Haloacid dehalogenase-like hydrolase TT_C1250 PF00156 Phosphoribosyl transferase domain TT_C1253 PF01230 HIT domain TT_C1254 PF04055 Radical SAM superfamily TT_C1254 PF00919 Uncharacterized protein family UPF0004 TT_C1255 PF02390 Putative methyltransferase TT_C1256 PF00155 Aminotransferase class I and II TT_C1257 PF00011 Hsp20/alpha crystallin family TT_C1258 PF00581 Rhodanese-like domain TT_C1259 PF00753 Metallo-beta-lactamase superfamily TT_C1261 PF02566 OsmC-like protein TT_C1264 PF01547 Bacterial extracellular solute-binding protein TT_C1265 PF00528 Binding-protein-dependent transport system inner membrane component TT_C1266 PF00005 ABC transporter TT_C1266 PF08402 TOBE domain TT_C1267 PF01416 tRNA pseudouridine synthase TT_C1268 PF00528 Binding-protein-dependent transport system inner membrane component TT_C1268 PF12911 N-terminal TM domain of oligopeptide transport permease C TT_C1270 PF00528 Binding-protein-dependent transport system inner membrane component TT_C1271 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TT_C1272 PF01521 Iron-sulphur cluster biosynthesis TT_C1273 PF00557 Metallopeptidase family M24 TT_C1273 PF01321 Creatinase/Prolidase N-terminal domain TT_C1274 PF14572 Phosphoribosyl synthetase-associated domain TT_C1274 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TT_C1277 PF17810 Arginine decarboxylase helical bundle domain TT_C1277 PF17944 Arginine decarboxylase C-terminal helical extension TT_C1277 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TT_C1278 PF00990 Diguanylate cyclase, GGDEF domain TT_C1278 PF08448 PAS fold TT_C1279 PF00438 S-adenosylmethionine synthetase, N-terminal domain TT_C1279 PF02772 S-adenosylmethionine synthetase, central domain TT_C1279 PF02773 S-adenosylmethionine synthetase, C-terminal domain TT_C1280 PF01177 Asp/Glu/Hydantoin racemase TT_C1281 PF03641 Possible lysine decarboxylase TT_C1282 PF01713 Smr domain TT_C1282 PF00488 MutS domain V TT_C1283 PF02903 Alpha amylase, N-terminal ig-like domain TT_C1283 PF00128 Alpha amylase, catalytic domain TT_C1286 PF00528 Binding-protein-dependent transport system inner membrane component TT_C1287 PF00528 Binding-protein-dependent transport system inner membrane component TT_C1287 PF14785 Maltose transport system permease protein MalF P2 domain TT_C1290 PF01725 Ham1 family TT_C1291 PF00348 Polyprenyl synthetase TT_C1293 PF06971 Putative DNA-binding protein N-terminus TT_C1293 PF02629 CoA binding domain TT_C1299 PF01196 Ribosomal protein L17 TT_C1300 PF01000 RNA polymerase Rpb3/RpoA insert domain TT_C1300 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TT_C1300 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TT_C1301 PF01479 S4 domain TT_C1301 PF00163 Ribosomal protein S4/S9 N-terminal domain TT_C1302 PF00411 Ribosomal protein S11 TT_C1303 PF00416 Ribosomal protein S13/S18 TT_C1304 PF00444 Ribosomal protein L36 TT_C1305 PF01176 Translation initiation factor 1A / IF-1 TT_C1306 PF00557 Metallopeptidase family M24 TT_C1308 PF00344 SecY translocase TT_C1309 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TT_C1310 PF00327 Ribosomal protein L30p/L7e TT_C1311 PF00333 Ribosomal protein S5, N-terminal domain TT_C1311 PF03719 Ribosomal protein S5, C-terminal domain TT_C1312 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TT_C1313 PF00347 Ribosomal protein L6 TT_C1314 PF00410 Ribosomal protein S8 TT_C1315 PF00253 Ribosomal protein S14p/S29e TT_C1316 PF00673 ribosomal L5P family C-terminus TT_C1316 PF00281 Ribosomal protein L5 TT_C1317 PF00467 KOW motif TT_C1317 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TT_C1318 PF00238 Ribosomal protein L14p/L23e TT_C1319 PF00366 Ribosomal protein S17 TT_C1320 PF00831 Ribosomal L29 protein TT_C1321 PF00252 Ribosomal protein L16p/L10e TT_C1322 PF00189 Ribosomal protein S3, C-terminal domain TT_C1322 PF07650 KH domain TT_C1323 PF00237 Ribosomal protein L22p/L17e TT_C1324 PF00203 Ribosomal protein S19 TT_C1325 PF00181 Ribosomal Proteins L2, RNA binding domain TT_C1325 PF03947 Ribosomal Proteins L2, C-terminal domain TT_C1326 PF00276 Ribosomal protein L23 TT_C1327 PF00573 Ribosomal protein L4/L1 family TT_C1328 PF00297 Ribosomal protein L3 TT_C1329 PF00338 Ribosomal protein S10p/S20e TT_C1330 PF00009 Elongation factor Tu GTP binding domain TT_C1330 PF03144 Elongation factor Tu domain 2 TT_C1330 PF03143 Elongation factor Tu C-terminal domain TT_C1331 PF00009 Elongation factor Tu GTP binding domain TT_C1331 PF03764 Elongation factor G, domain IV TT_C1331 PF14492 Elongation Factor G, domain II TT_C1331 PF03144 Elongation factor Tu domain 2 TT_C1331 PF00679 Elongation factor G C-terminus TT_C1332 PF00177 Ribosomal protein S7p/S5e TT_C1333 PF00164 Ribosomal protein S12/S23 TT_C1334 PF01546 Peptidase family M20/M25/M40 TT_C1334 PF07687 Peptidase dimerisation domain TT_C1335 PF04073 Aminoacyl-tRNA editing domain TT_C1335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TT_C1335 PF03129 Anticodon binding domain TT_C1339 PF01235 Sodium:alanine symporter family TT_C1343 PF03749 Sugar fermentation stimulation protein RE domain TT_C1343 PF17746 SfsA N-terminal OB domain TT_C1351 PF01894 Uncharacterised protein family UPF0047 TT_C1353 PF00924 Mechanosensitive ion channel TT_C1355 PF02824 TGS domain TT_C1355 PF13291 ACT domain TT_C1355 PF04607 Region found in RelA / SpoT proteins TT_C1356 PF00403 Heavy-metal-associated domain TT_C1357 PF02583 Metal-sensitive transcriptional repressor TT_C1358 PF00403 Heavy-metal-associated domain TT_C1360 PF00486 Transcriptional regulatory protein, C terminal TT_C1360 PF00072 Response regulator receiver domain TT_C1361 PF00672 HAMP domain TT_C1361 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TT_C1361 PF00512 His Kinase A (phospho-acceptor) domain TT_C1366 PF01209 ubiE/COQ5 methyltransferase family TT_C1370 PF07731 Multicopper oxidase TT_C1370 PF07732 Multicopper oxidase TT_C1373 PF00266 Aminotransferase class-V TT_C1374 PF01592 NifU-like N terminal domain TT_C1376 PF00561 alpha/beta hydrolase fold TT_C1376 PF00364 Biotin-requiring enzyme TT_C1378 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TT_C1378 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TT_C1380 PF00156 Phosphoribosyl transferase domain TT_C1381 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TT_C1382 PF02585 GlcNAc-PI de-N-acetylase TT_C1384 PF02504 Fatty acid synthesis protein TT_C1385 PF00085 Thioredoxin TT_C1386 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TT_C1386 PF03725 3' exoribonuclease family, domain 2 TT_C1386 PF00013 KH domain TT_C1386 PF00575 S1 RNA binding domain TT_C1386 PF01138 3' exoribonuclease family, domain 1 TT_C1387 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TT_C1388 PF00483 Nucleotidyl transferase TT_C1388 PF01050 Mannose-6-phosphate isomerase TT_C1389 PF00534 Glycosyl transferases group 1 TT_C1393 PF00202 Aminotransferase class-III TT_C1396 PF01546 Peptidase family M20/M25/M40 TT_C1397 PF00990 Diguanylate cyclase, GGDEF domain TT_C1397 PF17158 Membrane-associated sensor, integral membrane domain TT_C1399 PF07992 Pyridine nucleotide-disulphide oxidoreductase TT_C1404 PF00037 4Fe-4S binding domain TT_C1404 PF13247 4Fe-4S dicluster domain TT_C1408 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TT_C1409 PF17848 Acetyl-coA carboxylase zinc finger domain TT_C1409 PF01039 Carboxyl transferase domain TT_C1411 PF01551 Peptidase family M23 TT_C1411 PF08460 Bacterial SH3 domain TT_C1412 PF02885 Glycosyl transferase family, helical bundle domain TT_C1412 PF00591 Glycosyl transferase family, a/b domain TT_C1412 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TT_C1414 PF01116 Fructose-bisphosphate aldolase class-II TT_C1415 PF00437 Type II/IV secretion system protein TT_C1416 PF02569 Pantoate-beta-alanine ligase TT_C1421 PF01467 Cytidylyltransferase-like TT_C1422 PF01926 50S ribosome-binding GTPase TT_C1422 PF01018 GTP1/OBG TT_C1422 PF09269 Domain of unknown function (DUF1967) TT_C1423 PF01016 Ribosomal L27 protein TT_C1424 PF00829 Ribosomal prokaryotic L21 protein TT_C1426 PF01139 tRNA-splicing ligase RtcB TT_C1432 PF00872 Transposase, Mutator family TT_C1436 PF01967 MoaC family TT_C1437 PF03458 UPF0126 domain TT_C1438 PF02542 YgbB family TT_C1441 PF06779 Uncharacterised MFS-type transporter YbfB TT_C1442 PF03819 MazG nucleotide pyrophosphohydrolase domain TT_C1443 PF02142 MGS-like domain TT_C1445 PF02926 THUMP domain TT_C1445 PF02568 Thiamine biosynthesis protein (ThiI) TT_C1446 PF01425 Amidase TT_C1447 PF03600 Citrate transporter TT_C1451 PF01329 Pterin 4 alpha carbinolamine dehydratase TT_C1452 PF03061 Thioesterase superfamily TT_C1454 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain TT_C1454 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain TT_C1454 PF06827 Zinc finger found in FPG and IleRS TT_C1455 PF00528 Binding-protein-dependent transport system inner membrane component TT_C1457 PF00561 alpha/beta hydrolase fold TT_C1459 PF00596 Class II Aldolase and Adducin N-terminal domain TT_C1460 PF05000 RNA polymerase Rpb1, domain 4 TT_C1460 PF04998 RNA polymerase Rpb1, domain 5 TT_C1460 PF04983 RNA polymerase Rpb1, domain 3 TT_C1460 PF00623 RNA polymerase Rpb1, domain 2 TT_C1460 PF04997 RNA polymerase Rpb1, domain 1 TT_C1461 PF04560 RNA polymerase Rpb2, domain 7 TT_C1461 PF00562 RNA polymerase Rpb2, domain 6 TT_C1461 PF04563 RNA polymerase beta subunit TT_C1461 PF04561 RNA polymerase Rpb2, domain 2 TT_C1461 PF04565 RNA polymerase Rpb2, domain 3 TT_C1461 PF10385 RNA polymerase beta subunit external 1 domain TT_C1463 PF07977 FabA-like domain TT_C1465 PF12072 Domain of unknown function (DUF3552) TT_C1465 PF00013 KH domain TT_C1465 PF01966 HD domain TT_C1466 PF00154 recA bacterial DNA recombination protein TT_C1467 PF02834 LigT like Phosphoesterase TT_C1468 PF00994 Probable molybdopterin binding domain TT_C1468 PF18146 Damage-inducible protein CinA KH domain TT_C1468 PF02464 Competence-damaged protein TT_C1471 PF13419 Haloacid dehalogenase-like hydrolase TT_C1473 PF13378 Enolase C-terminal domain-like TT_C1473 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TT_C1476 PF00528 Binding-protein-dependent transport system inner membrane component TT_C1478 PF03652 Holliday junction resolvase TT_C1480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TT_C1480 PF01411 tRNA synthetases class II (A) TT_C1480 PF02272 DHHA1 domain TT_C1482 PF12704 MacB-like periplasmic core domain TT_C1482 PF02687 FtsX-like permease family TT_C1482 PF00005 ABC transporter TT_C1483 PF00005 ABC transporter TT_C1484 PF07992 Pyridine nucleotide-disulphide oxidoreductase TT_C1484 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TT_C1485 PF00463 Isocitrate lyase family TT_C1487 PF00005 ABC transporter TT_C1488 PF01458 Uncharacterized protein family (UPF0051) TT_C1489 PF01458 Uncharacterized protein family (UPF0051) TT_C1490 PF00355 Rieske [2Fe-2S] domain TT_C1491 PF02885 Glycosyl transferase family, helical bundle domain TT_C1491 PF00591 Glycosyl transferase family, a/b domain TT_C1492 PF00117 Glutamine amidotransferase class-I TT_C1493 PF04715 Anthranilate synthase component I, N terminal region TT_C1493 PF00425 chorismate binding enzyme TT_C1502 PF01451 Low molecular weight phosphotyrosine protein phosphatase TT_C1503 PF01209 ubiE/COQ5 methyltransferase family TT_C1508 PF04468 PSP1 C-terminal conserved region TT_C1509 PF09115 DNA polymerase III, delta subunit, C terminal TT_C1516 PF02824 TGS domain TT_C1516 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TT_C1516 PF03129 Anticodon binding domain TT_C1516 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TT_C1517 PF01227 GTP cyclohydrolase I TT_C1518 PF00132 Bacterial transferase hexapeptide (six repeats) TT_C1519 PF00293 NUDIX domain TT_C1523 PF12002 MgsA AAA+ ATPase C terminal TT_C1523 PF16193 AAA C-terminal domain TT_C1523 PF00004 ATPase family associated with various cellular activities (AAA) TT_C1525 PF00528 Binding-protein-dependent transport system inner membrane component TT_C1526 PF02515 CoA-transferase family III TT_C1527 PF00005 ABC transporter TT_C1530 PF00364 Biotin-requiring enzyme TT_C1530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TT_C1530 PF02817 e3 binding domain TT_C1531 PF00271 Helicase conserved C-terminal domain TT_C1531 PF17757 UvrB interaction domain TT_C1531 PF12344 Ultra-violet resistance protein B TT_C1531 PF04851 Type III restriction enzyme, res subunit TT_C1531 PF02151 UvrB/uvrC motif TT_C1532 PF00395 S-layer homology domain TT_C1533 PF01380 SIS domain TT_C1534 PF01134 Glucose inhibited division protein A TT_C1534 PF13932 GidA associated domain TT_C1535 PF14815 NUDIX domain TT_C1535 PF00730 HhH-GPD superfamily base excision DNA repair protein TT_C1535 PF00633 Helix-hairpin-helix motif TT_C1538 PF02540 NAD synthase TT_C1539 PF02540 NAD synthase TT_C1539 PF00795 Carbon-nitrogen hydrolase TT_C1540 PF09210 Domain of unknown function (DUF1957) TT_C1540 PF03065 Glycosyl hydrolase family 57 TT_C1541 PF00696 Amino acid kinase family TT_C1542 PF02774 Semialdehyde dehydrogenase, dimerisation domain TT_C1542 PF01118 Semialdehyde dehydrogenase, NAD binding domain TT_C1543 PF08443 RimK-like ATP-grasp domain TT_C1544 PF08271 TFIIB zinc-binding TT_C1546 PF00694 Aconitase C-terminal domain TT_C1547 PF00330 Aconitase family (aconitate hydratase) TT_C1551 PF01255 Putative undecaprenyl diphosphate synthase TT_C1552 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TT_C1552 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TT_C1552 PF02770 Acyl-CoA dehydrogenase, middle domain TT_C1553 PF02441 Flavoprotein TT_C1555 PF07992 Pyridine nucleotide-disulphide oxidoreductase TT_C1558 PF12679 ABC-2 family transporter protein TT_C1559 PF00005 ABC transporter TT_C1560 PF01923 Cobalamin adenosyltransferase TT_C1563 PF00696 Amino acid kinase family TT_C1563 PF01472 PUA domain TT_C1564 PF00171 Aldehyde dehydrogenase family TT_C1567 PF13631 Cytochrome b(N-terminal)/b6/petB TT_C1568 PF00355 Rieske [2Fe-2S] domain TT_C1570 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP TT_C1570 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TT_C1570 PF00034 Cytochrome c TT_C1573 PF13416 Bacterial extracellular solute-binding protein TT_C1574 PF04055 Radical SAM superfamily TT_C1575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TT_C1575 PF02770 Acyl-CoA dehydrogenase, middle domain TT_C1575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TT_C1576 PF13344 Haloacid dehalogenase-like hydrolase TT_C1576 PF00293 NUDIX domain TT_C1577 PF03462 PCRF domain TT_C1577 PF00472 RF-1 domain TT_C1578 PF02535 ZIP Zinc transporter TT_C1579 PF02630 SCO1/SenC TT_C1581 PF01906 Putative heavy-metal-binding TT_C1583 PF03819 MazG nucleotide pyrophosphohydrolase domain TT_C1585 PF01965 DJ-1/PfpI family TT_C1586 PF00696 Amino acid kinase family TT_C1588 PF12169 DNA polymerase III subunits gamma and tau domain III TT_C1589 PF02583 Metal-sensitive transcriptional repressor TT_C1591 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TT_C1591 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TT_C1591 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TT_C1592 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TT_C1593 PF01266 FAD dependent oxidoreductase TT_C1594 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TT_C1594 PF01409 tRNA synthetases class II core domain (F) TT_C1595 PF03483 B3/4 domain TT_C1595 PF03484 tRNA synthetase B5 domain TT_C1595 PF03147 Ferredoxin-fold anticodon binding domain TT_C1595 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TT_C1595 PF01588 Putative tRNA binding domain TT_C1597 PF00365 Phosphofructokinase TT_C1598 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TT_C1600 PF00719 Inorganic pyrophosphatase TT_C1603 PF13567 Domain of unknown function (DUF4131) TT_C1603 PF03772 Competence protein TT_C1603 PF00753 Metallo-beta-lactamase superfamily TT_C1604 PF02195 ParB-like nuclease domain TT_C1604 PF17762 HTH domain found in ParB protein TT_C1605 PF13614 AAA domain TT_C1606 PF02527 rRNA small subunit methyltransferase G TT_C1607 PF13932 GidA associated domain TT_C1607 PF01134 Glucose inhibited division protein A TT_C1608 PF11638 DnaA N-terminal domain TT_C1608 PF00308 Bacterial dnaA protein TT_C1608 PF08299 Bacterial dnaA protein helix-turn-helix TT_C1609 PF00712 DNA polymerase III beta subunit, N-terminal domain TT_C1609 PF02767 DNA polymerase III beta subunit, central domain TT_C1609 PF02768 DNA polymerase III beta subunit, C-terminal domain TT_C1610 PF03952 Enolase, N-terminal domain TT_C1610 PF00113 Enolase, C-terminal TIM barrel domain TT_C1611 PF00224 Pyruvate kinase, barrel domain TT_C1611 PF02887 Pyruvate kinase, alpha/beta domain TT_C1613 PF16123 Hydroxyacylglutathione hydrolase C-terminus TT_C1613 PF00753 Metallo-beta-lactamase superfamily TT_C1614 PF02779 Transketolase, pyrimidine binding domain TT_C1614 PF02780 Transketolase, C-terminal domain TT_C1614 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TT_C1616 PF04012 PspA/IM30 family TT_C1618 PF00300 Histidine phosphatase superfamily (branch 1) TT_C1619 PF02769 AIR synthase related protein, C-terminal domain TT_C1619 PF00586 AIR synthase related protein, N-terminal domain TT_C1620 PF02637 GatB domain TT_C1620 PF02934 GatB/GatE catalytic domain TT_C1621 PF00437 Type II/IV secretion system protein TT_C1622 PF00437 Type II/IV secretion system protein TT_C1622 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TT_C1625 PF01975 Survival protein SurE TT_C1626 PF00313 'Cold-shock' DNA-binding domain TT_C1627 PF01547 Bacterial extracellular solute-binding protein TT_C1628 PF00528 Binding-protein-dependent transport system inner membrane component TT_C1629 PF00528 Binding-protein-dependent transport system inner membrane component TT_C1630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TT_C1630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TT_C1630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TT_C1630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TT_C1632 PF07690 Major Facilitator Superfamily TT_C1633 PF00582 Universal stress protein family TT_C1634 PF01380 SIS domain TT_C1634 PF00571 CBS domain TT_C1635 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV TT_C1636 PF00291 Pyridoxal-phosphate dependent enzyme TT_C1637 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TT_C1638 PF03900 Porphobilinogen deaminase, C-terminal domain TT_C1638 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TT_C1640 PF02875 Mur ligase family, glutamate ligase domain TT_C1640 PF08245 Mur ligase middle domain TT_C1641 PF00155 Aminotransferase class I and II TT_C1642 PF00994 Probable molybdopterin binding domain TT_C1647 PF00885 6,7-dimethyl-8-ribityllumazine synthase TT_C1648 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TT_C1649 PF02641 Uncharacterized ACR, COG1993 TT_C1650 PF00174 Oxidoreductase molybdopterin binding domain TT_C1652 PF02811 PHP domain TT_C1654 PF00730 HhH-GPD superfamily base excision DNA repair protein TT_C1655 PF00857 Isochorismatase family TT_C1656 PF02219 Methylenetetrahydrofolate reductase TT_C1659 PF01676 Metalloenzyme superfamily TT_C1660 PF02457 DisA bacterial checkpoint controller nucleotide-binding TT_C1662 PF01327 Polypeptide deformylase TT_C1663 PF02911 Formyl transferase, C-terminal domain TT_C1663 PF00551 Formyl transferase TT_C1664 PF03668 P-loop ATPase protein family TT_C1665 PF01933 Uncharacterised protein family UPF0052 TT_C1671 PF00510 Cytochrome c oxidase subunit III TT_C1671 PF00115 Cytochrome C and Quinol oxidase polypeptide I TT_C1673 PF02628 Cytochrome oxidase assembly protein TT_C1673 PF01040 UbiA prenyltransferase family TT_C1674 PF01594 AI-2E family transporter TT_C1675 PF00860 Permease family TT_C1676 PF01702 Queuine tRNA-ribosyltransferase TT_C1677 PF04551 GcpE protein TT_C1688 PF00480 ROK family TT_C1690 PF01546 Peptidase family M20/M25/M40 TT_C1690 PF07687 Peptidase dimerisation domain TT_C1691 PF08032 RNA 2'-O ribose methyltransferase substrate binding TT_C1691 PF00588 SpoU rRNA Methylase family TT_C1692 PF00582 Universal stress protein family TT_C1693 PF03641 Possible lysine decarboxylase TT_C1695 PF13419 Haloacid dehalogenase-like hydrolase TT_C1696 PF07499 RuvA, C-terminal domain TT_C1696 PF01330 RuvA N terminal domain TT_C1697 PF00378 Enoyl-CoA hydratase/isomerase TT_C1698 PF16870 2-oxoglutarate dehydrogenase C-terminal TT_C1698 PF00676 Dehydrogenase E1 component TT_C1698 PF02779 Transketolase, pyrimidine binding domain TT_C1698 PF16078 2-oxoglutarate dehydrogenase N-terminus TT_C1699 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TT_C1699 PF00364 Biotin-requiring enzyme TT_C1699 PF02817 e3 binding domain TT_C1700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TT_C1700 PF07992 Pyridine nucleotide-disulphide oxidoreductase TT_C1701 PF00764 Arginosuccinate synthase TT_C1702 PF14698 Argininosuccinate lyase C-terminal TT_C1702 PF00206 Lyase TT_C1706 PF00117 Glutamine amidotransferase class-I TT_C1706 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TT_C1707 PF01268 Formate--tetrahydrofolate ligase TT_C1708 PF00291 Pyridoxal-phosphate dependent enzyme TT_C1709 PF01293 Phosphoenolpyruvate carboxykinase TT_C1710 PF00342 Phosphoglucose isomerase TT_C1712 PF08032 RNA 2'-O ribose methyltransferase substrate binding TT_C1712 PF00588 SpoU rRNA Methylase family TT_C1713 PF00166 Chaperonin 10 Kd subunit TT_C1714 PF00118 TCP-1/cpn60 chaperonin family TT_C1715 PF02074 Carboxypeptidase Taq (M32) metallopeptidase TT_C1716 PF01478 Type IV leader peptidase family TT_C1716 PF06750 Bacterial Peptidase A24 N-terminal domain TT_C1718 PF00881 Nitroreductase family TT_C1719 PF00877 NlpC/P60 family TT_C1719 PF01476 LysM domain TT_C1721 PF13476 AAA domain TT_C1722 PF07690 Major Facilitator Superfamily TT_C1723 PF00005 ABC transporter TT_C1724 PF00528 Binding-protein-dependent transport system inner membrane component TT_C1725 PF00528 Binding-protein-dependent transport system inner membrane component TT_C1726 PF12849 PBP superfamily domain TT_C1729 PF02789 Cytosol aminopeptidase family, N-terminal domain TT_C1729 PF00883 Cytosol aminopeptidase family, catalytic domain TT_C1730 PF01475 Ferric uptake regulator family TT_C1733 PF00753 Metallo-beta-lactamase superfamily TT_C1733 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TT_C1733 PF10996 Beta-Casp domain TT_C1734 PF03143 Elongation factor Tu C-terminal domain TT_C1734 PF00009 Elongation factor Tu GTP binding domain TT_C1734 PF03144 Elongation factor Tu domain 2 TT_C1735 PF00471 Ribosomal protein L33 TT_C1736 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TT_C1737 PF02357 Transcription termination factor nusG TT_C1737 PF00467 KOW motif TT_C1738 PF00298 Ribosomal protein L11, RNA binding domain TT_C1738 PF03946 Ribosomal protein L11, N-terminal domain TT_C1739 PF00687 Ribosomal protein L1p/L10e family TT_C1740 PF01250 Ribosomal protein S6 TT_C1741 PF00436 Single-strand binding protein family TT_C1742 PF01084 Ribosomal protein S18 TT_C1743 PF01281 Ribosomal protein L9, N-terminal domain TT_C1743 PF03948 Ribosomal protein L9, C-terminal domain TT_C1744 PF01070 FMN-dependent dehydrogenase TT_C1745 PF00106 short chain dehydrogenase TT_C1746 PF03099 Biotin/lipoate A/B protein ligase family TT_C1747 PF04055 Radical SAM superfamily TT_C1747 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family TT_C1749 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TT_C1749 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TT_C1753 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TT_C1753 PF07992 Pyridine nucleotide-disulphide oxidoreductase TT_C1754 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TT_C1754 PF02817 e3 binding domain TT_C1754 PF00364 Biotin-requiring enzyme TT_C1756 PF02780 Transketolase, C-terminal domain TT_C1756 PF02779 Transketolase, pyrimidine binding domain TT_C1757 PF00676 Dehydrogenase E1 component TT_C1758 PF02590 Predicted SPOUT methyltransferase TT_C1761 PF02237 Biotin protein ligase C terminal domain TT_C1761 PF03099 Biotin/lipoate A/B protein ligase family TT_C1762 PF00483 Nucleotidyl transferase TT_C1763 PF01209 ubiE/COQ5 methyltransferase family TT_C1764 PF00709 Adenylosuccinate synthetase TT_C1767 PF01479 S4 domain TT_C1767 PF00849 RNA pseudouridylate synthase TT_C1768 PF00378 Enoyl-CoA hydratase/isomerase TT_C1769 PF01509 TruB family pseudouridylate synthase (N terminal domain) TT_C1770 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TT_C1770 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TT_C1772 PF02734 DAK2 domain TT_C1772 PF13684 Dihydroxyacetone kinase family TT_C1774 PF06725 3D domain TT_C1774 PF03990 G5-linked-Ubiquitin-like domain TT_C1774 PF07501 G5 domain TT_C1775 PF12704 MacB-like periplasmic core domain TT_C1775 PF02687 FtsX-like permease family TT_C1776 PF16320 Ribosomal protein L7/L12 dimerisation domain TT_C1776 PF00542 Ribosomal protein L7/L12 C-terminal domain TT_C1777 PF00466 Ribosomal protein L10 TT_C1778 PF02233 NAD(P) transhydrogenase beta subunit TT_C1779 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch TT_C1780 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TT_C1780 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TT_C1782 PF00892 EamA-like transporter family TT_C1784 PF02661 Fic/DOC family TT_C1784 PF12728 Helix-turn-helix domain TT_C1785 PF13335 Magnesium chelatase, subunit ChlI C-terminal TT_C1785 PF01078 Magnesium chelatase, subunit ChlI TT_C1786 PF01568 Molydopterin dinucleotide binding domain TT_C1786 PF00384 Molybdopterin oxidoreductase TT_C1786 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TT_C1787 PF00135 Carboxylesterase family TT_C1788 PF01351 Ribonuclease HII TT_C1790 PF03480 Bacterial extracellular solute-binding protein, family 7 TT_C1791 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TT_C1793 PF07690 Major Facilitator Superfamily TT_C1795 PF00809 Pterin binding enzyme TT_C1796 PF02152 Dihydroneopterin aldolase TT_C1798 PF00334 Nucleoside diphosphate kinase TT_C1800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TT_C1800 PF03466 LysR substrate binding domain TT_C1801 PF00456 Transketolase, thiamine diphosphate binding domain TT_C1801 PF17831 Pyruvate dehydrogenase E1 component middle domain TT_C1802 PF00364 Biotin-requiring enzyme TT_C1802 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TT_C1802 PF02817 e3 binding domain TT_C1806 PF02811 PHP domain TT_C1806 PF14579 Helix-hairpin-helix motif TT_C1806 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TT_C1806 PF07733 Bacterial DNA polymerase III alpha NTPase domain TT_C1807 PF12804 MobA-like NTP transferase domain TT_C1809 PF00037 4Fe-4S binding domain TT_C1811 PF00313 'Cold-shock' DNA-binding domain TT_C1812 PF00226 DnaJ domain TT_C1812 PF01556 DnaJ C terminal domain TT_C1812 PF00684 DnaJ central domain TT_C1813 PF00266 Aminotransferase class-V TT_C1814 PF02673 Bacitracin resistance protein BacA TT_C1815 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TT_C1816 PF00288 GHMP kinases N terminal domain TT_C1816 PF08544 GHMP kinases C terminal TT_C1819 PF08359 YsiA-like protein, C-terminal region TT_C1819 PF00440 Bacterial regulatory proteins, tetR family TT_C1820 PF03575 Peptidase family S51 TT_C1823 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TT_C1824 PF00575 S1 RNA binding domain TT_C1825 PF08264 Anticodon-binding domain of tRNA TT_C1825 PF13603 Leucyl-tRNA synthetase, Domain 2 TT_C1825 PF00133 tRNA synthetases class I (I, L, M and V) TT_C1829 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TT_C1833 PF08240 Alcohol dehydrogenase GroES-like domain TT_C1833 PF00107 Zinc-binding dehydrogenase TT_C1834 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 TT_C1834 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain TT_C1836 PF07963 Prokaryotic N-terminal methylation motif TT_C1836 PF00114 Pilin (bacterial filament) TT_C1838 PF07963 Prokaryotic N-terminal methylation motif TT_C1838 PF08334 Type II secretion system (T2SS), protein G TT_C1839 PF07963 Prokaryotic N-terminal methylation motif TT_C1839 PF08334 Type II secretion system (T2SS), protein G TT_C1844 PF00437 Type II/IV secretion system protein TT_C1845 PF00482 Type II secretion system (T2SS), protein F TT_C1847 PF00849 RNA pseudouridylate synthase TT_C1847 PF01479 S4 domain TT_C1848 PF01411 tRNA synthetases class II (A) TT_C1848 PF02272 DHHA1 domain TT_C1848 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TT_C1849 PF00072 Response regulator receiver domain TT_C1849 PF00486 Transcriptional regulatory protein, C terminal TT_C1850 PF00512 His Kinase A (phospho-acceptor) domain TT_C1850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TT_C1851 PF01895 PhoU domain TT_C1852 PF03462 PCRF domain TT_C1852 PF00472 RF-1 domain TT_C1854 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TT_C1856 PF00069 Protein kinase domain TT_C1856 PF13360 PQQ-like domain TT_C1857 PF01042 Endoribonuclease L-PSP TT_C1860 PF03477 ATP cone domain TT_C1862 PF01661 Macro domain TT_C1864 PF00692 dUTPase TT_C1865 PF13393 Histidyl-tRNA synthetase TT_C1866 PF01634 ATP phosphoribosyltransferase TT_C1867 PF12105 SpoU, rRNA methylase, C-terminal TT_C1867 PF00588 SpoU rRNA Methylase family TT_C1870 PF01063 Amino-transferase class IV TT_C1871 PF03466 LysR substrate binding domain TT_C1871 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TT_C1872 PF05067 Manganese containing catalase TT_C1873 PF17782 DprA winged helix domain TT_C1873 PF02481 DNA recombination-mediator protein A TT_C1874 PF01926 50S ribosome-binding GTPase TT_C1874 PF07650 KH domain TT_C1875 PF00132 Bacterial transferase hexapeptide (six repeats) TT_C1875 PF14602 Hexapeptide repeat of succinyl-transferase TT_C1875 PF12464 Maltose acetyltransferase TT_C1876 PF00589 Phage integrase family TT_C1876 PF14659 Phage integrase, N-terminal SAM-like domain TT_C1880 PF01555 DNA methylase TT_C1886 PF01368 DHH family TT_C1886 PF02272 DHHA1 domain TT_C1888 PF01676 Metalloenzyme superfamily TT_C1888 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase TT_C1889 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TT_C1889 PF09180 Prolyl-tRNA synthetase, C-terminal TT_C1889 PF03129 Anticodon binding domain TT_C1890 PF09383 NIL domain TT_C1890 PF00005 ABC transporter TT_C1892 PF00633 Helix-hairpin-helix motif TT_C1892 PF10576 Iron-sulfur binding domain of endonuclease III TT_C1892 PF00730 HhH-GPD superfamily base excision DNA repair protein TT_C1894 PF00994 Probable molybdopterin binding domain TT_C1894 PF03453 MoeA N-terminal region (domain I and II) TT_C1894 PF03454 MoeA C-terminal region (domain IV) TT_C1895 PF00270 DEAD/DEAH box helicase TT_C1895 PF00271 Helicase conserved C-terminal domain TT_C1896 PF02780 Transketolase, C-terminal domain TT_C1896 PF02779 Transketolase, pyrimidine binding domain TT_C1896 PF00456 Transketolase, thiamine diphosphate binding domain TT_C1898 PF00834 Ribulose-phosphate 3 epimerase family TT_C1901 PF03060 Nitronate monooxygenase TT_C1904 PF08245 Mur ligase middle domain TT_C1904 PF01225 Mur ligase family, catalytic domain TT_C1904 PF02875 Mur ligase family, glutamate ligase domain TT_C1905 PF13180 PDZ domain TT_C1906 PF05746 DALR anticodon binding domain TT_C1906 PF00750 tRNA synthetases class I (R) TT_C1906 PF03485 Arginyl tRNA synthetase N terminal domain TT_C1907 PF00361 Proton-conducting membrane transporter TT_C1908 PF00361 Proton-conducting membrane transporter TT_C1909 PF00361 Proton-conducting membrane transporter TT_C1909 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TT_C1910 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TT_C1911 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TT_C1912 PF12838 4Fe-4S dicluster domain TT_C1913 PF00146 NADH dehydrogenase TT_C1914 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TT_C1914 PF00384 Molybdopterin oxidoreductase TT_C1914 PF01568 Molydopterin dinucleotide binding domain TT_C1914 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TT_C1915 PF10531 SLBB domain TT_C1915 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TT_C1915 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TT_C1917 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TT_C1918 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit TT_C1919 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TT_C1920 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 TT_C1921 PF00398 Ribosomal RNA adenine dimethylase TT_C1923 PF04098 Rad52/22 family double-strand break repair protein TT_C1926 PF09827 CRISPR associated protein Cas2 TT_C1928 PF00459 Inositol monophosphatase family TT_C1929 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TT_C1930 PF03477 ATP cone domain TT_C1930 PF00317 Ribonucleotide reductase, all-alpha domain TT_C1930 PF00317 Ribonucleotide reductase, all-alpha domain TT_C1930 PF03477 ATP cone domain TT_C1930 PF02867 Ribonucleotide reductase, barrel domain TT_C1930 PF02867 Ribonucleotide reductase, barrel domain TT_C1931 PF01396 Topoisomerase DNA binding C4 zinc finger TT_C1931 PF01751 Toprim domain TT_C1931 PF01131 DNA topoisomerase TT_C1933 PF04294 VanW like protein TT_C1935 PF00528 Binding-protein-dependent transport system inner membrane component TT_C1936 PF12849 PBP superfamily domain TT_C1940 PF01565 FAD binding domain TT_C1942 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TT_C1942 PF00271 Helicase conserved C-terminal domain TT_C1942 PF00270 DEAD/DEAH box helicase TT_C1942 PF17764 3′ DNA-binding domain (3′BD) TT_C1942 PF18074 Primosomal protein N C-terminal domain TT_C1944 PF00842 Alanine racemase, C-terminal domain TT_C1944 PF01168 Alanine racemase, N-terminal domain TT_C1947 PF02391 MoaE protein TT_C1948 PF01628 HrcA protein C terminal domain TT_C1949 PF00543 Nitrogen regulatory protein P-II TT_C1950 PF00909 Ammonium Transporter Family TT_C1951 PF17191 RecG wedge domain TT_C1951 PF13749 Putative ATP-dependent DNA helicase recG C-terminal TT_C1951 PF00270 DEAD/DEAH box helicase TT_C1952 PF00588 SpoU rRNA Methylase family TT_C1954 PF00850 Histone deacetylase domain TT_C1957 PF00781 Diacylglycerol kinase catalytic domain TT_C1962 PF02254 TrkA-N domain TT_C1962 PF02080 TrkA-C domain TT_C1962 PF00999 Sodium/hydrogen exchanger family TT_C1963 PF01252 Signal peptidase (SPase) II TT_C1964 PF00830 Ribosomal L28 family TT_C1966 PF02913 FAD linked oxidases, C-terminal domain TT_C1966 PF01565 FAD binding domain TT_C1969 PF00248 Aldo/keto reductase family TT_C1972 PF01804 Penicillin amidase TT_C1973 PF17156 Gammaproteobacterial periplasmic sensor domain TT_C1973 PF00990 Diguanylate cyclase, GGDEF domain TT_C1975 PF05362 Lon protease (S16) C-terminal proteolytic domain TT_C1975 PF13654 AAA domain TT_C1976 PF00483 Nucleotidyl transferase TT_C1978 PF00486 Transcriptional regulatory protein, C terminal TT_C1978 PF00072 Response regulator receiver domain TT_C1979 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like TT_C1980 PF00534 Glycosyl transferases group 1 TT_C1980 PF08323 Starch synthase catalytic domain TT_C1982 PF01207 Dihydrouridine synthase (Dus) TT_C1983 PF02401 LytB protein TT_C1986 PF00348 Polyprenyl synthetase TT_C1988 PF06463 Molybdenum Cofactor Synthesis C TT_C1988 PF04055 Radical SAM superfamily TT_P0001 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TT_P0001 PF07685 CobB/CobQ-like glutamine amidotransferase domain TT_P0002 PF12557 Cob(I)alamin adenosyltransferase N terminal TT_P0002 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TT_P0004 PF02654 Cobalamin-5-phosphate synthase TT_P0005 PF02277 Phosphoribosyltransferase TT_P0006 PF00300 Histidine phosphatase superfamily (branch 1) TT_P0007 PF03824 High-affinity nickel-transport protein TT_P0008 PF01888 CbiD TT_P0009 PF02570 Precorrin-8X methylmutase TT_P0010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TT_P0011 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TT_P0012 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TT_P0013 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TT_P0013 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TT_P0014 PF11761 Cobalamin biosynthesis central region TT_P0014 PF01890 Cobalamin synthesis G C-terminus TT_P0014 PF11760 Cobalamin synthesis G N-terminal TT_P0015 PF01903 CbiX TT_P0017 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TT_P0017 PF14824 Sirohaem biosynthesis protein central TT_P0017 PF10414 Sirohaem synthase dimerisation region TT_P0018 PF00881 Nitroreductase family TT_P0019 PF03186 CobD/Cbib protein TT_P0022 PF00155 Aminotransferase class I and II TT_P0023 PF07685 CobB/CobQ-like glutamine amidotransferase domain TT_P0024 PF00245 Alkaline phosphatase TT_P0025 PF01979 Amidohydrolase family TT_P0028 PF01975 Survival protein SurE TT_P0030 PF01081 KDPG and KHG aldolase TT_P0031 PF03480 Bacterial extracellular solute-binding protein, family 7 TT_P0033 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TT_P0036 PF00294 pfkB family carbohydrate kinase TT_P0038 PF00356 Bacterial regulatory proteins, lacI family TT_P0040 PF00528 Binding-protein-dependent transport system inner membrane component TT_P0041 PF00528 Binding-protein-dependent transport system inner membrane component TT_P0042 PF00232 Glycosyl hydrolase family 1 TT_P0043 PF12706 Beta-lactamase superfamily domain TT_P0045 PF13847 Methyltransferase domain TT_P0045 PF03551 Transcriptional regulator PadR-like family TT_P0047 PF01593 Flavin containing amine oxidoreductase TT_P0048 PF11066 Protein of unknown function (DUF2867) TT_P0048 PF13460 NAD(P)H-binding TT_P0049 PF00106 short chain dehydrogenase TT_P0052 PF03851 UV-endonuclease UvdE TT_P0054 PF05368 NmrA-like family TT_P0055 PF00027 Cyclic nucleotide-binding domain TT_P0055 PF13545 Crp-like helix-turn-helix domain TT_P0056 PF13411 MerR HTH family regulatory protein TT_P0056 PF02607 B12 binding domain TT_P0058 PF00875 DNA photolyase TT_P0058 PF03441 FAD binding domain of DNA photolyase TT_P0059 PF00067 Cytochrome P450 TT_P0065 PF01850 PIN domain TT_P0066 PF01593 Flavin containing amine oxidoreductase TT_P0067 PF01070 FMN-dependent dehydrogenase TT_P0071 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain TT_P0071 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain TT_P0079 PF00072 Response regulator receiver domain TT_P0081 PF13173 AAA domain TT_P0081 PF13635 Domain of unknown function (DUF4143) TT_P0083 PF02195 ParB-like nuclease domain TT_P0084 PF13614 AAA domain TT_P0095 PF01625 Peptide methionine sulfoxide reductase TT_P0101 PF09827 CRISPR associated protein Cas2 TT_P0102 PF01966 HD domain TT_P0102 PF18211 Csm1 subunit domain B TT_P0104 PF03787 RAMP superfamily TT_P0119 PF09701 CRISPR-associated protein (Cas_Cmr5) TT_P0122 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain TT_P0122 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 TT_P0124 PF00270 DEAD/DEAH box helicase TT_P0124 PF01131 DNA topoisomerase TT_P0124 PF01751 Toprim domain TT_P0124 PF17915 Reverse gyrase zinc finger TT_P0128 PF00270 DEAD/DEAH box helicase TT_P0128 PF00271 Helicase conserved C-terminal domain TT_P0128 PF00570 HRDC domain TT_P0128 PF09382 RQC domain TT_P0128 PF16124 RecQ zinc-binding TT_P0133 PF09704 CRISPR-associated protein (Cas_Cas5) TT_P0137 PF03746 LamB/YcsF family TT_P0138 PF02634 FdhD/NarQ family TT_P0150 PF03992 Antibiotic biosynthesis monooxygenase TT_P0160 PF03061 Thioesterase superfamily TT_P0162 PF08343 Ribonucleotide reductase N-terminal TT_P0162 PF00317 Ribonucleotide reductase, all-alpha domain TT_P0162 PF02867 Ribonucleotide reductase, barrel domain TT_P0165 PF10099 Anti-sigma-K factor rskA TT_P0167 PF00072 Response regulator receiver domain TT_P0175 PF01497 Periplasmic binding protein TT_P0177 PF00005 ABC transporter TT_P0178 PF01032 FecCD transport family TT_P0179 PF01497 Periplasmic binding protein TT_P0182 PF00872 Transposase, Mutator family TT_P0184 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TT_P0187 PF13333 Integrase core domain TT_P0187 PF13276 HTH-like domain TT_P0187 PF00665 Integrase core domain TT_P0195 PF09827 CRISPR associated protein Cas2 TT_P0196 PF01867 CRISPR associated protein Cas1 TT_P0213 PF02371 Transposase IS116/IS110/IS902 family TT_P0213 PF01548 Transposase TT_P0215 PF01867 CRISPR associated protein Cas1 TT_P0216 PF01551 Peptidase family M23 TT_P0216 PF08525 Opacity-associated protein A N-terminal motif TT_P0216 PF01476 LysM domain TT_P0218 PF04794 YdjC-like protein TT_P0221 PF16338 Domain of unknown function (DUF4968) TT_P0221 PF01055 Glycosyl hydrolases family 31 TT_P0221 PF13802 Galactose mutarotase-like TT_P0221 PF17137 Domain of unknown function (DUF5110) TT_P0222 PF02837 Glycosyl hydrolases family 2, sugar binding domain TT_P0222 PF02929 Beta galactosidase small chain TT_P0222 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TT_P0222 PF16353 Domain of unknown function(DUF4981)