locus-tag class description JCM10941_00010 PF00308 Bacterial dnaA protein JCM10941_00010 PF08299 Bacterial dnaA protein helix-turn-helix JCM10941_00010 PF11638 DnaA N-terminal domain JCM10941_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain JCM10941_00020 PF02767 DNA polymerase III beta subunit, central domain JCM10941_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain JCM10941_00030 PF00113 Enolase, C-terminal TIM barrel domain JCM10941_00030 PF03952 Enolase, N-terminal domain JCM10941_00040 PF00224 Pyruvate kinase, barrel domain JCM10941_00040 PF02887 Pyruvate kinase, alpha/beta domain JCM10941_00060 PF00753 Metallo-beta-lactamase superfamily JCM10941_00060 PF16123 Hydroxyacylglutathione hydrolase C-terminus JCM10941_00070 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JCM10941_00070 PF02779 Transketolase, pyrimidine binding domain JCM10941_00070 PF02780 Transketolase, C-terminal domain JCM10941_00090 PF04012 PspA/IM30 family JCM10941_00100 PF06463 Molybdenum Cofactor Synthesis C JCM10941_00100 PF04055 Radical SAM superfamily JCM10941_00120 PF00348 Polyprenyl synthetase JCM10941_00150 PF02401 LytB protein JCM10941_00160 PF01207 Dihydrouridine synthase (Dus) JCM10941_00180 PF08323 Starch synthase catalytic domain JCM10941_00180 PF00534 Glycosyl transferases group 1 JCM10941_00190 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like JCM10941_00200 PF00072 Response regulator receiver domain JCM10941_00200 PF00486 Transcriptional regulatory protein, C terminal JCM10941_00220 PF00483 Nucleotidyl transferase JCM10941_00230 PF13654 AAA domain JCM10941_00230 PF05362 Lon protease (S16) C-terminal proteolytic domain JCM10941_00240 PF01804 Penicillin amidase JCM10941_00270 PF00248 Aldo/keto reductase family JCM10941_00330 PF15937 prlF antitoxin for toxin YhaV_toxin JCM10941_00360 PF07690 Major Facilitator Superfamily JCM10941_00410 PF02913 FAD linked oxidases, C-terminal domain JCM10941_00410 PF01565 FAD binding domain JCM10941_00430 PF00830 Ribosomal L28 family JCM10941_00440 PF01252 Signal peptidase (SPase) II JCM10941_00450 PF02254 TrkA-N domain JCM10941_00450 PF02080 TrkA-C domain JCM10941_00450 PF00999 Sodium/hydrogen exchanger family JCM10941_00470 PF00155 Aminotransferase class I and II JCM10941_00500 PF00781 Diacylglycerol kinase catalytic domain JCM10941_00530 PF00850 Histone deacetylase domain JCM10941_00550 PF00588 SpoU rRNA Methylase family JCM10941_00560 PF00270 DEAD/DEAH box helicase JCM10941_00560 PF13749 Putative ATP-dependent DNA helicase recG C-terminal JCM10941_00560 PF17191 RecG wedge domain JCM10941_00570 PF00909 Ammonium Transporter Family JCM10941_00580 PF00543 Nitrogen regulatory protein P-II JCM10941_00590 PF01628 HrcA protein C terminal domain JCM10941_00600 PF02391 MoaE protein JCM10941_00630 PF01168 Alanine racemase, N-terminal domain JCM10941_00630 PF00842 Alanine racemase, C-terminal domain JCM10941_00640 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JCM10941_00640 PF18074 Primosomal protein N C-terminal domain JCM10941_00640 PF00271 Helicase conserved C-terminal domain JCM10941_00640 PF00270 DEAD/DEAH box helicase JCM10941_00640 PF17764 3′ DNA-binding domain (3′BD) JCM10941_00660 PF01565 FAD binding domain JCM10941_00700 PF12849 PBP superfamily domain JCM10941_00710 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_00720 PF00005 ABC transporter JCM10941_00730 PF04294 VanW like protein JCM10941_00750 PF01396 Topoisomerase DNA binding C4 zinc finger JCM10941_00750 PF01131 DNA topoisomerase JCM10941_00750 PF01751 Toprim domain JCM10941_00760 PF00317 Ribonucleotide reductase, all-alpha domain JCM10941_00760 PF08343 Ribonucleotide reductase N-terminal JCM10941_00760 PF02867 Ribonucleotide reductase, barrel domain JCM10941_00760 PF14528 LAGLIDADG-like domain JCM10941_00770 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JCM10941_00780 PF00459 Inositol monophosphatase family JCM10941_00800 PF09827 CRISPR associated protein Cas2 JCM10941_00820 PF04098 Rad52/22 family double-strand break repair protein JCM10941_00840 PF00398 Ribosomal RNA adenine dimethylase JCM10941_00850 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JCM10941_00860 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JCM10941_00870 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JCM10941_00880 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JCM10941_00900 PF10531 SLBB domain JCM10941_00900 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JCM10941_00900 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JCM10941_00910 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JCM10941_00910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCM10941_00910 PF00384 Molybdopterin oxidoreductase JCM10941_00910 PF01568 Molydopterin dinucleotide binding domain JCM10941_00920 PF00146 NADH dehydrogenase JCM10941_00930 PF12838 4Fe-4S dicluster domain JCM10941_00940 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JCM10941_00950 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JCM10941_00960 PF00361 Proton-conducting membrane transporter JCM10941_00960 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JCM10941_00970 PF00361 Proton-conducting membrane transporter JCM10941_00980 PF00361 Proton-conducting membrane transporter JCM10941_00990 PF03485 Arginyl tRNA synthetase N terminal domain JCM10941_00990 PF00750 tRNA synthetases class I (R) JCM10941_00990 PF05746 DALR anticodon binding domain JCM10941_01000 PF13180 PDZ domain JCM10941_01010 PF01225 Mur ligase family, catalytic domain JCM10941_01010 PF08245 Mur ligase middle domain JCM10941_01010 PF02875 Mur ligase family, glutamate ligase domain JCM10941_01040 PF03060 Nitronate monooxygenase JCM10941_01070 PF00834 Ribulose-phosphate 3 epimerase family JCM10941_01090 PF00456 Transketolase, thiamine diphosphate binding domain JCM10941_01090 PF02780 Transketolase, C-terminal domain JCM10941_01090 PF02779 Transketolase, pyrimidine binding domain JCM10941_01100 PF00270 DEAD/DEAH box helicase JCM10941_01100 PF00271 Helicase conserved C-terminal domain JCM10941_01110 PF00994 Probable molybdopterin binding domain JCM10941_01110 PF03454 MoeA C-terminal region (domain IV) JCM10941_01110 PF03453 MoeA N-terminal region (domain I and II) JCM10941_01130 PF00633 Helix-hairpin-helix motif JCM10941_01130 PF10576 Iron-sulfur binding domain of endonuclease III JCM10941_01130 PF00730 HhH-GPD superfamily base excision DNA repair protein JCM10941_01150 PF09383 NIL domain JCM10941_01150 PF00005 ABC transporter JCM10941_01160 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCM10941_01160 PF09180 Prolyl-tRNA synthetase, C-terminal JCM10941_01160 PF03129 Anticodon binding domain JCM10941_01170 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase JCM10941_01170 PF01676 Metalloenzyme superfamily JCM10941_01190 PF02272 DHHA1 domain JCM10941_01190 PF01368 DHH family JCM10941_01200 PF00132 Bacterial transferase hexapeptide (six repeats) JCM10941_01200 PF12464 Maltose acetyltransferase JCM10941_01200 PF14602 Hexapeptide repeat of succinyl-transferase JCM10941_01210 PF07650 KH domain JCM10941_01210 PF01926 50S ribosome-binding GTPase JCM10941_01220 PF17782 DprA winged helix domain JCM10941_01220 PF02481 DNA recombination-mediator protein A JCM10941_01230 PF05067 Manganese containing catalase JCM10941_01240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM10941_01240 PF03466 LysR substrate binding domain JCM10941_01250 PF01063 Amino-transferase class IV JCM10941_01280 PF00588 SpoU rRNA Methylase family JCM10941_01280 PF12105 SpoU, rRNA methylase, C-terminal JCM10941_01290 PF01634 ATP phosphoribosyltransferase JCM10941_01300 PF13393 Histidyl-tRNA synthetase JCM10941_01310 PF00692 dUTPase JCM10941_01330 PF01661 Macro domain JCM10941_01340 PF00106 short chain dehydrogenase JCM10941_01350 PF03477 ATP cone domain JCM10941_01380 PF01042 Endoribonuclease L-PSP JCM10941_01390 PF00069 Protein kinase domain JCM10941_01390 PF13360 PQQ-like domain JCM10941_01410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCM10941_01430 PF03462 PCRF domain JCM10941_01430 PF00472 RF-1 domain JCM10941_01440 PF01895 PhoU domain JCM10941_01450 PF00512 His Kinase A (phospho-acceptor) domain JCM10941_01450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM10941_01460 PF00072 Response regulator receiver domain JCM10941_01460 PF00486 Transcriptional regulatory protein, C terminal JCM10941_01470 PF01411 tRNA synthetases class II (A) JCM10941_01470 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCM10941_01470 PF02272 DHHA1 domain JCM10941_01490 PF00849 RNA pseudouridylate synthase JCM10941_01490 PF01479 S4 domain JCM10941_01530 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 JCM10941_01530 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain JCM10941_01540 PF00107 Zinc-binding dehydrogenase JCM10941_01540 PF08240 Alcohol dehydrogenase GroES-like domain JCM10941_01580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JCM10941_01620 PF08264 Anticodon-binding domain of tRNA JCM10941_01620 PF13603 Leucyl-tRNA synthetase, Domain 2 JCM10941_01620 PF00133 tRNA synthetases class I (I, L, M and V) JCM10941_01630 PF00575 S1 RNA binding domain JCM10941_01640 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JCM10941_01670 PF03575 Peptidase family S51 JCM10941_01680 PF00440 Bacterial regulatory proteins, tetR family JCM10941_01680 PF08359 YsiA-like protein, C-terminal region JCM10941_01710 PF00288 GHMP kinases N terminal domain JCM10941_01710 PF08544 GHMP kinases C terminal JCM10941_01720 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JCM10941_01730 PF02673 Bacitracin resistance protein BacA JCM10941_01740 PF00266 Aminotransferase class-V JCM10941_01750 PF00226 DnaJ domain JCM10941_01750 PF01556 DnaJ C terminal domain JCM10941_01750 PF00684 DnaJ central domain JCM10941_01760 PF00313 'Cold-shock' DNA-binding domain JCM10941_01780 PF00037 4Fe-4S binding domain JCM10941_01800 PF12804 MobA-like NTP transferase domain JCM10941_01810 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCM10941_01810 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCM10941_01810 PF02811 PHP domain JCM10941_01810 PF14579 Helix-hairpin-helix motif JCM10941_01850 PF02817 e3 binding domain JCM10941_01850 PF00364 Biotin-requiring enzyme JCM10941_01850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCM10941_01860 PF00456 Transketolase, thiamine diphosphate binding domain JCM10941_01860 PF17831 Pyruvate dehydrogenase E1 component middle domain JCM10941_01870 PF03466 LysR substrate binding domain JCM10941_01870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JCM10941_01890 PF00334 Nucleoside diphosphate kinase JCM10941_01910 PF02152 Dihydroneopterin aldolase JCM10941_01920 PF00809 Pterin binding enzyme JCM10941_01940 PF07690 Major Facilitator Superfamily JCM10941_01960 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JCM10941_01970 PF03480 Bacterial extracellular solute-binding protein, family 7 JCM10941_01990 PF01351 Ribonuclease HII JCM10941_02000 PF00135 Carboxylesterase family JCM10941_02010 PF01568 Molydopterin dinucleotide binding domain JCM10941_02010 PF00384 Molybdopterin oxidoreductase JCM10941_02010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JCM10941_02020 PF13335 Magnesium chelatase, subunit ChlI C-terminal JCM10941_02020 PF01078 Magnesium chelatase, subunit ChlI JCM10941_02030 PF02661 Fic/DOC family JCM10941_02030 PF12728 Helix-turn-helix domain JCM10941_02050 PF00892 EamA-like transporter family JCM10941_02070 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JCM10941_02070 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JCM10941_02080 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JCM10941_02090 PF02233 NAD(P) transhydrogenase beta subunit JCM10941_02100 PF00466 Ribosomal protein L10 JCM10941_02110 PF16320 Ribosomal protein L7/L12 dimerisation domain JCM10941_02110 PF00542 Ribosomal protein L7/L12 C-terminal domain JCM10941_02120 PF12704 MacB-like periplasmic core domain JCM10941_02120 PF02687 FtsX-like permease family JCM10941_02130 PF03990 G5-linked-Ubiquitin-like domain JCM10941_02130 PF07501 G5 domain JCM10941_02130 PF06725 3D domain JCM10941_02150 PF02734 DAK2 domain JCM10941_02150 PF13684 Dihydroxyacetone kinase family JCM10941_02170 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JCM10941_02170 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JCM10941_02180 PF01509 TruB family pseudouridylate synthase (N terminal domain) JCM10941_02190 PF00378 Enoyl-CoA hydratase/isomerase JCM10941_02200 PF01479 S4 domain JCM10941_02200 PF00849 RNA pseudouridylate synthase JCM10941_02210 PF00156 Phosphoribosyl transferase domain JCM10941_02230 PF00709 Adenylosuccinate synthetase JCM10941_02240 PF01209 ubiE/COQ5 methyltransferase family JCM10941_02250 PF00483 Nucleotidyl transferase JCM10941_02260 PF03099 Biotin/lipoate A/B protein ligase family JCM10941_02260 PF02237 Biotin protein ligase C terminal domain JCM10941_02290 PF02590 Predicted SPOUT methyltransferase JCM10941_02300 PF00676 Dehydrogenase E1 component JCM10941_02310 PF02780 Transketolase, C-terminal domain JCM10941_02310 PF02779 Transketolase, pyrimidine binding domain JCM10941_02340 PF00364 Biotin-requiring enzyme JCM10941_02340 PF02817 e3 binding domain JCM10941_02340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCM10941_02350 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM10941_02350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCM10941_02370 PF00872 Transposase, Mutator family JCM10941_02400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCM10941_02400 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCM10941_02420 PF04055 Radical SAM superfamily JCM10941_02420 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JCM10941_02430 PF03099 Biotin/lipoate A/B protein ligase family JCM10941_02440 PF00106 short chain dehydrogenase JCM10941_02450 PF01281 Ribosomal protein L9, N-terminal domain JCM10941_02450 PF03948 Ribosomal protein L9, C-terminal domain JCM10941_02460 PF01084 Ribosomal protein S18 JCM10941_02470 PF00436 Single-strand binding protein family JCM10941_02480 PF01250 Ribosomal protein S6 JCM10941_02490 PF00687 Ribosomal protein L1p/L10e family JCM10941_02500 PF00298 Ribosomal protein L11, RNA binding domain JCM10941_02500 PF03946 Ribosomal protein L11, N-terminal domain JCM10941_02510 PF00467 KOW motif JCM10941_02510 PF02357 Transcription termination factor nusG JCM10941_02520 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JCM10941_02530 PF00471 Ribosomal protein L33 JCM10941_02540 PF03144 Elongation factor Tu domain 2 JCM10941_02540 PF03143 Elongation factor Tu C-terminal domain JCM10941_02540 PF00009 Elongation factor Tu GTP binding domain JCM10941_02550 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JCM10941_02550 PF00753 Metallo-beta-lactamase superfamily JCM10941_02550 PF10996 Beta-Casp domain JCM10941_02580 PF01475 Ferric uptake regulator family JCM10941_02590 PF02789 Cytosol aminopeptidase family, N-terminal domain JCM10941_02590 PF00883 Cytosol aminopeptidase family, catalytic domain JCM10941_02620 PF12849 PBP superfamily domain JCM10941_02630 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_02640 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_02650 PF00005 ABC transporter JCM10941_02660 PF07690 Major Facilitator Superfamily JCM10941_02670 PF13476 AAA domain JCM10941_02690 PF00877 NlpC/P60 family JCM10941_02690 PF01476 LysM domain JCM10941_02700 PF00881 Nitroreductase family JCM10941_02720 PF06750 Bacterial Peptidase A24 N-terminal domain JCM10941_02720 PF01478 Type IV leader peptidase family JCM10941_02730 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JCM10941_02740 PF00118 TCP-1/cpn60 chaperonin family JCM10941_02750 PF00166 Chaperonin 10 Kd subunit JCM10941_02780 PF00588 SpoU rRNA Methylase family JCM10941_02780 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCM10941_02800 PF00342 Phosphoglucose isomerase JCM10941_02810 PF01293 Phosphoenolpyruvate carboxykinase JCM10941_02820 PF00291 Pyridoxal-phosphate dependent enzyme JCM10941_02830 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JCM10941_02830 PF00117 Glutamine amidotransferase class-I JCM10941_02860 PF14698 Argininosuccinate lyase C-terminal JCM10941_02860 PF00206 Lyase JCM10941_02870 PF00764 Arginosuccinate synthase JCM10941_02900 PF00082 Subtilase family JCM10941_02900 PF04151 Bacterial pre-peptidase C-terminal domain JCM10941_02910 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM10941_02910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCM10941_02920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCM10941_02920 PF00364 Biotin-requiring enzyme JCM10941_02920 PF02817 e3 binding domain JCM10941_02930 PF16078 2-oxoglutarate dehydrogenase N-terminus JCM10941_02930 PF00676 Dehydrogenase E1 component JCM10941_02930 PF16870 2-oxoglutarate dehydrogenase C-terminal JCM10941_02930 PF02779 Transketolase, pyrimidine binding domain JCM10941_02940 PF00378 Enoyl-CoA hydratase/isomerase JCM10941_02950 PF07499 RuvA, C-terminal domain JCM10941_02950 PF01330 RuvA N terminal domain JCM10941_02960 PF13419 Haloacid dehalogenase-like hydrolase JCM10941_02980 PF03641 Possible lysine decarboxylase JCM10941_02990 PF00582 Universal stress protein family JCM10941_03000 PF08032 RNA 2'-O ribose methyltransferase substrate binding JCM10941_03000 PF00588 SpoU rRNA Methylase family JCM10941_03010 PF01546 Peptidase family M20/M25/M40 JCM10941_03010 PF07687 Peptidase dimerisation domain JCM10941_03030 PF00480 ROK family JCM10941_03090 PF04551 GcpE protein JCM10941_03100 PF01702 Queuine tRNA-ribosyltransferase JCM10941_03110 PF00860 Permease family JCM10941_03120 PF00860 Permease family JCM10941_03130 PF01594 AI-2E family transporter JCM10941_03140 PF02628 Cytochrome oxidase assembly protein JCM10941_03140 PF01040 UbiA prenyltransferase family JCM10941_03150 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JCM10941_03150 PF00034 Cytochrome c JCM10941_03150 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JCM10941_03160 PF00115 Cytochrome C and Quinol oxidase polypeptide I JCM10941_03160 PF00510 Cytochrome c oxidase subunit III JCM10941_03220 PF01933 Uncharacterised protein family UPF0052 JCM10941_03230 PF03668 P-loop ATPase protein family JCM10941_03240 PF00551 Formyl transferase JCM10941_03240 PF02911 Formyl transferase, C-terminal domain JCM10941_03250 PF01327 Polypeptide deformylase JCM10941_03270 PF02457 DisA bacterial checkpoint controller nucleotide-binding JCM10941_03280 PF01676 Metalloenzyme superfamily JCM10941_03310 PF02219 Methylenetetrahydrofolate reductase JCM10941_03320 PF00857 Isochorismatase family JCM10941_03330 PF00730 HhH-GPD superfamily base excision DNA repair protein JCM10941_03350 PF02811 PHP domain JCM10941_03370 PF00174 Oxidoreductase molybdopterin binding domain JCM10941_03380 PF02641 Uncharacterized ACR, COG1993 JCM10941_03390 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JCM10941_03400 PF00885 6,7-dimethyl-8-ribityllumazine synthase JCM10941_03450 PF00994 Probable molybdopterin binding domain JCM10941_03460 PF00155 Aminotransferase class I and II JCM10941_03470 PF02875 Mur ligase family, glutamate ligase domain JCM10941_03470 PF08245 Mur ligase middle domain JCM10941_03490 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JCM10941_03490 PF03900 Porphobilinogen deaminase, C-terminal domain JCM10941_03500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JCM10941_03510 PF00291 Pyridoxal-phosphate dependent enzyme JCM10941_03520 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JCM10941_03530 PF00571 CBS domain JCM10941_03530 PF01380 SIS domain JCM10941_03540 PF00582 Universal stress protein family JCM10941_03550 PF07690 Major Facilitator Superfamily JCM10941_03570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCM10941_03570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCM10941_03570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCM10941_03570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCM10941_03580 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_03590 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_03600 PF01547 Bacterial extracellular solute-binding protein JCM10941_03630 PF00313 'Cold-shock' DNA-binding domain JCM10941_03640 PF01975 Survival protein SurE JCM10941_03650 PF02578 Multi-copper polyphenol oxidoreductase laccase JCM10941_03670 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JCM10941_03670 PF00437 Type II/IV secretion system protein JCM10941_03680 PF00437 Type II/IV secretion system protein JCM10941_03690 PF02637 GatB domain JCM10941_03690 PF02934 GatB/GatE catalytic domain JCM10941_03700 PF02769 AIR synthase related protein, C-terminal domain JCM10941_03700 PF00586 AIR synthase related protein, N-terminal domain JCM10941_03710 PF00300 Histidine phosphatase superfamily (branch 1) JCM10941_03730 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM10941_03750 PF02021 Uncharacterised protein family UPF0102 JCM10941_03760 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JCM10941_03770 PF02525 Flavodoxin-like fold JCM10941_03780 PF00814 Glycoprotease family JCM10941_03800 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_03810 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_03870 PF01790 Prolipoprotein diacylglyceryl transferase JCM10941_03880 PF00132 Bacterial transferase hexapeptide (six repeats) JCM10941_03880 PF14602 Hexapeptide repeat of succinyl-transferase JCM10941_03880 PF12804 MobA-like NTP transferase domain JCM10941_03890 PF02416 mttA/Hcf106 family JCM10941_03900 PF00902 Sec-independent protein translocase protein (TatC) JCM10941_03910 PF01817 Chorismate mutase type II JCM10941_03910 PF00793 DAHP synthetase I family JCM10941_03930 PF00890 FAD binding domain JCM10941_03940 PF00890 FAD binding domain JCM10941_04030 PF00107 Zinc-binding dehydrogenase JCM10941_04030 PF08240 Alcohol dehydrogenase GroES-like domain JCM10941_04030 PF13823 Alcohol dehydrogenase GroES-associated JCM10941_04060 PF17862 AAA+ lid domain JCM10941_04060 PF00004 ATPase family associated with various cellular activities (AAA) JCM10941_04060 PF06480 FtsH Extracellular JCM10941_04060 PF01434 Peptidase family M41 JCM10941_04090 PF05496 Holliday junction DNA helicase RuvB P-loop domain JCM10941_04090 PF05491 RuvB C-terminal winged helix domain JCM10941_04090 PF17864 RuvB AAA lid domain JCM10941_04100 PF02548 Ketopantoate hydroxymethyltransferase JCM10941_04110 PF00849 RNA pseudouridylate synthase JCM10941_04120 PF01555 DNA methylase JCM10941_04140 PF00155 Aminotransferase class I and II JCM10941_04150 PF13286 Phosphohydrolase-associated domain JCM10941_04150 PF01966 HD domain JCM10941_04160 PF02801 Beta-ketoacyl synthase, C-terminal domain JCM10941_04160 PF00109 Beta-ketoacyl synthase, N-terminal domain JCM10941_04170 PF00550 Phosphopantetheine attachment site JCM10941_04190 PF00698 Acyl transferase domain JCM10941_04200 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JCM10941_04200 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JCM10941_04210 PF01783 Ribosomal L32p protein family JCM10941_04280 PF00881 Nitroreductase family JCM10941_04310 PF00155 Aminotransferase class I and II JCM10941_04320 PF00475 Imidazoleglycerol-phosphate dehydratase JCM10941_04330 PF00117 Glutamine amidotransferase class-I JCM10941_04340 PF00294 pfkB family carbohydrate kinase JCM10941_04350 PF00571 CBS domain JCM10941_04350 PF00478 IMP dehydrogenase / GMP reductase domain JCM10941_04380 PF02600 Disulfide bond formation protein DsbB JCM10941_04390 PF02881 SRP54-type protein, helical bundle domain JCM10941_04390 PF00448 SRP54-type protein, GTPase domain JCM10941_04410 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCM10941_04420 PF00005 ABC transporter JCM10941_04460 PF02096 60Kd inner membrane protein JCM10941_04470 PF01809 Putative membrane protein insertion efficiency factor JCM10941_04480 PF00825 Ribonuclease P JCM10941_04490 PF12399 Branched-chain amino acid ATP-binding cassette transporter JCM10941_04490 PF00005 ABC transporter JCM10941_04500 PF00501 AMP-binding enzyme JCM10941_04510 PF02653 Branched-chain amino acid transport system / permease component JCM10941_04520 PF11862 Domain of unknown function (DUF3382) JCM10941_04520 PF02653 Branched-chain amino acid transport system / permease component JCM10941_04540 PF00005 ABC transporter JCM10941_04550 PF00005 ABC transporter JCM10941_04560 PF00950 ABC 3 transport family JCM10941_04570 PF02082 Transcriptional regulator JCM10941_04580 PF00266 Aminotransferase class-V JCM10941_04590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JCM10941_04600 PF02224 Cytidylate kinase JCM10941_04620 PF00293 NUDIX domain JCM10941_04670 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM10941_04680 PF00109 Beta-ketoacyl synthase, N-terminal domain JCM10941_04680 PF00698 Acyl transferase domain JCM10941_04680 PF08240 Alcohol dehydrogenase GroES-like domain JCM10941_04680 PF16197 Ketoacyl-synthetase C-terminal extension JCM10941_04680 PF14765 Polyketide synthase dehydratase JCM10941_04680 PF02801 Beta-ketoacyl synthase, C-terminal domain JCM10941_04680 PF08659 KR domain JCM10941_04680 PF00550 Phosphopantetheine attachment site JCM10941_04710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCM10941_04720 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_04730 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_04730 PF12911 N-terminal TM domain of oligopeptide transport permease C JCM10941_04740 PF00005 ABC transporter JCM10941_04740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCM10941_04750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JCM10941_04750 PF00005 ABC transporter JCM10941_04760 PF00571 CBS domain JCM10941_04770 PF00850 Histone deacetylase domain JCM10941_04780 PF02597 ThiS family JCM10941_04790 PF01171 PP-loop family JCM10941_04800 PF00128 Alpha amylase, catalytic domain JCM10941_04800 PF16657 Maltogenic Amylase, C-terminal domain JCM10941_04810 PF02358 Trehalose-phosphatase JCM10941_04810 PF03636 Glycosyl hydrolase family 65, N-terminal domain JCM10941_04810 PF03632 Glycosyl hydrolase family 65 central catalytic domain JCM10941_04810 PF03633 Glycosyl hydrolase family 65, C-terminal domain JCM10941_04820 PF00982 Glycosyltransferase family 20 JCM10941_04840 PF00128 Alpha amylase, catalytic domain JCM10941_04850 PF01209 ubiE/COQ5 methyltransferase family JCM10941_04860 PF01209 ubiE/COQ5 methyltransferase family JCM10941_04870 PF00795 Carbon-nitrogen hydrolase JCM10941_04890 PF08331 Domain of unknown function (DUF1730) JCM10941_04920 PF03447 Homoserine dehydrogenase, NAD binding domain JCM10941_04920 PF01842 ACT domain JCM10941_04920 PF00742 Homoserine dehydrogenase JCM10941_04940 PF00291 Pyridoxal-phosphate dependent enzyme JCM10941_04990 PF11497 NADH-quinone oxidoreductase chain 15 JCM10941_05000 PF04055 Radical SAM superfamily JCM10941_05000 PF06969 HemN C-terminal domain JCM10941_05030 PF13660 Domain of unknown function (DUF4147) JCM10941_05030 PF05161 MOFRL family JCM10941_05040 PF01850 PIN domain JCM10941_05060 PF02754 Cysteine-rich domain JCM10941_05060 PF13183 4Fe-4S dicluster domain JCM10941_05070 PF01565 FAD binding domain JCM10941_05070 PF02913 FAD linked oxidases, C-terminal domain JCM10941_05080 PF01565 FAD binding domain JCM10941_05080 PF02913 FAD linked oxidases, C-terminal domain JCM10941_05090 PF01274 Malate synthase JCM10941_05100 PF01614 Bacterial transcriptional regulator JCM10941_05100 PF09339 IclR helix-turn-helix domain JCM10941_05110 PF13411 MerR HTH family regulatory protein JCM10941_05120 PF01546 Peptidase family M20/M25/M40 JCM10941_05120 PF07687 Peptidase dimerisation domain JCM10941_05130 PF01588 Putative tRNA binding domain JCM10941_05140 PF14535 AMP-binding enzyme C-terminal domain JCM10941_05140 PF00501 AMP-binding enzyme JCM10941_05160 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JCM10941_05160 PF02222 ATP-grasp domain JCM10941_05170 PF00731 AIR carboxylase JCM10941_05210 PF03741 Integral membrane protein TerC family JCM10941_05230 PF01883 Iron-sulfur cluster assembly protein JCM10941_05240 PF00390 Malic enzyme, N-terminal domain JCM10941_05240 PF03949 Malic enzyme, NAD binding domain JCM10941_05270 PF08669 Glycine cleavage T-protein C-terminal barrel domain JCM10941_05270 PF01571 Aminomethyltransferase folate-binding domain JCM10941_05280 PF01597 Glycine cleavage H-protein JCM10941_05290 PF02347 Glycine cleavage system P-protein JCM10941_05300 PF02347 Glycine cleavage system P-protein JCM10941_05310 PF01687 Riboflavin kinase JCM10941_05310 PF06574 FAD synthetase JCM10941_05320 PF00293 NUDIX domain JCM10941_05330 PF01979 Amidohydrolase family JCM10941_05360 PF04545 Sigma-70, region 4 JCM10941_05360 PF00140 Sigma-70 factor, region 1.2 JCM10941_05360 PF04542 Sigma-70 region 2 JCM10941_05360 PF04539 Sigma-70 region 3 JCM10941_05370 PF08468 Methyltransferase small domain N-terminal JCM10941_05370 PF05175 Methyltransferase small domain JCM10941_05380 PF13840 ACT domain JCM10941_05380 PF00696 Amino acid kinase family JCM10941_05380 PF01842 ACT domain JCM10941_05390 PF00156 Phosphoribosyl transferase domain JCM10941_05400 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCM10941_05400 PF00056 lactate/malate dehydrogenase, NAD binding domain JCM10941_05410 PF02629 CoA binding domain JCM10941_05410 PF00549 CoA-ligase JCM10941_05420 PF08442 ATP-grasp domain JCM10941_05420 PF00549 CoA-ligase JCM10941_05430 PF01861 Branched-chain polyamine synthase A C-terminal domain JCM10941_05440 PF01938 TRAM domain JCM10941_05450 PF18073 Rubredoxin metal binding domain JCM10941_05460 PF10431 C-terminal, D2-small domain, of ClpB protein JCM10941_05460 PF17871 AAA lid domain JCM10941_05460 PF02861 Clp amino terminal domain, pathogenicity island component JCM10941_05460 PF00004 ATPase family associated with various cellular activities (AAA) JCM10941_05460 PF07724 AAA domain (Cdc48 subfamily) JCM10941_05470 PF03129 Anticodon binding domain JCM10941_05470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCM10941_05500 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCM10941_05500 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCM10941_05510 PF01728 FtsJ-like methyltransferase JCM10941_05510 PF01479 S4 domain JCM10941_05540 PF02637 GatB domain JCM10941_05540 PF00749 tRNA synthetases class I (E and Q), catalytic domain JCM10941_05540 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JCM10941_05550 PF00378 Enoyl-CoA hydratase/isomerase JCM10941_05560 PF00707 Translation initiation factor IF-3, C-terminal domain JCM10941_05560 PF05198 Translation initiation factor IF-3, N-terminal domain JCM10941_05570 PF01632 Ribosomal protein L35 JCM10941_05580 PF00453 Ribosomal protein L20 JCM10941_05600 PF02660 Glycerol-3-phosphate acyltransferase JCM10941_05610 PF01048 Phosphorylase superfamily JCM10941_05620 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JCM10941_05620 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JCM10941_05630 PF10415 Fumarase C C-terminus JCM10941_05630 PF00206 Lyase JCM10941_05640 PF00108 Thiolase, N-terminal domain JCM10941_05640 PF02803 Thiolase, C-terminal domain JCM10941_05670 PF01048 Phosphorylase superfamily JCM10941_05680 PF01168 Alanine racemase, N-terminal domain JCM10941_05710 PF16360 GTP-binding GTPase Middle Region JCM10941_05710 PF13167 GTP-binding GTPase N-terminal JCM10941_05710 PF01926 50S ribosome-binding GTPase JCM10941_05720 PF00708 Acylphosphatase JCM10941_05750 PF08240 Alcohol dehydrogenase GroES-like domain JCM10941_05750 PF00107 Zinc-binding dehydrogenase JCM10941_05760 PF07995 Glucose / Sorbosone dehydrogenase JCM10941_05790 PF01425 Amidase JCM10941_05800 PF00929 Exonuclease JCM10941_05800 PF02811 PHP domain JCM10941_05800 PF14579 Helix-hairpin-helix motif JCM10941_05800 PF11490 DNA polymerase III polC-type N-terminus II JCM10941_05800 PF14480 DNA polymerase III polC-type N-terminus I JCM10941_05800 PF07733 Bacterial DNA polymerase III alpha NTPase domain JCM10941_05800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JCM10941_05840 PF00485 Phosphoribulokinase / Uridine kinase family JCM10941_05850 PF00005 ABC transporter JCM10941_05850 PF17912 MalK OB fold domain JCM10941_05850 PF03459 TOBE domain JCM10941_05870 PF00266 Aminotransferase class-V JCM10941_05880 PF04260 Protein of unknown function (DUF436) JCM10941_05900 PF02653 Branched-chain amino acid transport system / permease component JCM10941_05900 PF11862 Domain of unknown function (DUF3382) JCM10941_05910 PF00501 AMP-binding enzyme JCM10941_05920 PF00005 ABC transporter JCM10941_05920 PF12399 Branched-chain amino acid ATP-binding cassette transporter JCM10941_05930 PF00005 ABC transporter JCM10941_05950 PF13458 Periplasmic binding protein JCM10941_05960 PF16363 GDP-mannose 4,6 dehydratase JCM10941_05990 PF03480 Bacterial extracellular solute-binding protein, family 7 JCM10941_06000 PF10509 Galactokinase galactose-binding signature JCM10941_06000 PF08544 GHMP kinases C terminal JCM10941_06000 PF00288 GHMP kinases N terminal domain JCM10941_06010 PF01297 Zinc-uptake complex component A periplasmic JCM10941_06040 PF01593 Flavin containing amine oxidoreductase JCM10941_06050 PF00762 Ferrochelatase JCM10941_06060 PF01208 Uroporphyrinogen decarboxylase (URO-D) JCM10941_06090 PF00501 AMP-binding enzyme JCM10941_06090 PF13193 AMP-binding enzyme C-terminal domain JCM10941_06110 PF02261 Aspartate decarboxylase JCM10941_06120 PF04055 Radical SAM superfamily JCM10941_06120 PF06968 Biotin and Thiamin Synthesis associated domain JCM10941_06130 PF05670 NFACT protein RNA binding domain JCM10941_06140 PF08704 tRNA methyltransferase complex GCD14 subunit JCM10941_06160 PF06153 Cyclic-di-AMP receptor JCM10941_06170 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JCM10941_06170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCM10941_06190 PF05698 Bacterial trigger factor protein (TF) C-terminus JCM10941_06190 PF05697 Bacterial trigger factor protein (TF) JCM10941_06200 PF00574 Clp protease JCM10941_06210 PF07724 AAA domain (Cdc48 subfamily) JCM10941_06210 PF10431 C-terminal, D2-small domain, of ClpB protein JCM10941_06210 PF06689 ClpX C4-type zinc finger JCM10941_06220 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JCM10941_06220 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JCM10941_06220 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JCM10941_06230 PF02607 B12 binding domain JCM10941_06230 PF00809 Pterin binding enzyme JCM10941_06230 PF02310 B12 binding domain JCM10941_06230 PF02574 Homocysteine S-methyltransferase JCM10941_06230 PF02965 Vitamin B12 dependent methionine synthase, activation domain JCM10941_06250 PF04715 Anthranilate synthase component I, N terminal region JCM10941_06250 PF00425 chorismate binding enzyme JCM10941_06270 PF03449 Transcription elongation factor, N-terminal JCM10941_06270 PF01272 Transcription elongation factor, GreA/GreB, C-term JCM10941_06300 PF13277 YmdB-like protein JCM10941_06310 PF00311 Phosphoenolpyruvate carboxylase JCM10941_06320 PF01741 Large-conductance mechanosensitive channel, MscL JCM10941_06330 PF02416 mttA/Hcf106 family JCM10941_06350 PF00004 ATPase family associated with various cellular activities (AAA) JCM10941_06350 PF07724 AAA domain (Cdc48 subfamily) JCM10941_06350 PF10431 C-terminal, D2-small domain, of ClpB protein JCM10941_06360 PF00227 Proteasome subunit JCM10941_06440 PF01909 Nucleotidyltransferase domain JCM10941_06440 PF08335 GlnD PII-uridylyltransferase JCM10941_06440 PF01966 HD domain JCM10941_06470 PF02397 Bacterial sugar transferase JCM10941_06480 PF00534 Glycosyl transferases group 1 JCM10941_06480 PF13579 Glycosyl transferase 4-like domain JCM10941_06490 PF00534 Glycosyl transferases group 1 JCM10941_06490 PF13439 Glycosyltransferase Family 4 JCM10941_06510 PF00534 Glycosyl transferases group 1 JCM10941_06510 PF13439 Glycosyltransferase Family 4 JCM10941_06520 PF01943 Polysaccharide biosynthesis protein JCM10941_06520 PF14667 Polysaccharide biosynthesis C-terminal domain JCM10941_06530 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCM10941_06530 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCM10941_06530 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCM10941_06530 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCM10941_06570 PF01883 Iron-sulfur cluster assembly protein JCM10941_06570 PF10609 NUBPL iron-transfer P-loop NTPase JCM10941_06600 PF04452 RNA methyltransferase JCM10941_06630 PF00106 short chain dehydrogenase JCM10941_06650 PF00056 lactate/malate dehydrogenase, NAD binding domain JCM10941_06650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCM10941_06660 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JCM10941_06660 PF02896 PEP-utilising enzyme, TIM barrel domain JCM10941_06660 PF00391 PEP-utilising enzyme, mobile domain JCM10941_06670 PF00550 Phosphopantetheine attachment site JCM10941_06670 PF00698 Acyl transferase domain JCM10941_06670 PF08240 Alcohol dehydrogenase GroES-like domain JCM10941_06670 PF08990 Erythronolide synthase docking JCM10941_06670 PF09277 Erythronolide synthase, docking JCM10941_06670 PF16197 Ketoacyl-synthetase C-terminal extension JCM10941_06670 PF00109 Beta-ketoacyl synthase, N-terminal domain JCM10941_06670 PF14765 Polyketide synthase dehydratase JCM10941_06670 PF02801 Beta-ketoacyl synthase, C-terminal domain JCM10941_06670 PF08659 KR domain JCM10941_06680 PF00296 Luciferase-like monooxygenase JCM10941_06690 PF01747 ATP-sulfurylase JCM10941_06690 PF14306 PUA-like domain JCM10941_06700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCM10941_06700 PF10414 Sirohaem synthase dimerisation region JCM10941_06700 PF14824 Sirohaem biosynthesis protein central JCM10941_06710 PF01925 Sulfite exporter TauE/SafE JCM10941_06720 PF01507 Phosphoadenosine phosphosulfate reductase family JCM10941_06730 PF10414 Sirohaem synthase dimerisation region JCM10941_06730 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCM10941_06730 PF14824 Sirohaem biosynthesis protein central JCM10941_06740 PF02602 Uroporphyrinogen-III synthase HemD JCM10941_06750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JCM10941_06750 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JCM10941_06770 PF02581 Thiamine monophosphate synthase JCM10941_06780 PF02597 ThiS family JCM10941_06790 PF05690 Thiazole biosynthesis protein ThiG JCM10941_06800 PF01266 FAD dependent oxidoreductase JCM10941_06800 PF05690 Thiazole biosynthesis protein ThiG JCM10941_06810 PF01964 Radical SAM ThiC family JCM10941_06820 PF07690 Major Facilitator Superfamily JCM10941_06830 PF08543 Phosphomethylpyrimidine kinase JCM10941_06880 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_06890 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_06910 PF00480 ROK family JCM10941_06920 PF00108 Thiolase, N-terminal domain JCM10941_06920 PF02803 Thiolase, C-terminal domain JCM10941_06930 PF00106 short chain dehydrogenase JCM10941_06960 PF00005 ABC transporter JCM10941_06970 PF00005 ABC transporter JCM10941_06970 PF12399 Branched-chain amino acid ATP-binding cassette transporter JCM10941_06990 PF07549 SecD/SecF GG Motif JCM10941_06990 PF02355 Protein export membrane protein JCM10941_07010 PF00009 Elongation factor Tu GTP binding domain JCM10941_07010 PF11987 Translation-initiation factor 2 JCM10941_07010 PF04760 Translation initiation factor IF-2, N-terminal region JCM10941_07030 PF00575 S1 RNA binding domain JCM10941_07030 PF13184 NusA-like KH domain JCM10941_07030 PF08529 NusA N-terminal domain JCM10941_07040 PF17384 RimP C-terminal SH3 domain JCM10941_07040 PF02576 RimP N-terminal domain JCM10941_07050 PF04225 Opacity-associated protein A LysM-like domain JCM10941_07050 PF01551 Peptidase family M23 JCM10941_07060 PF01680 SOR/SNZ family JCM10941_07070 PF01022 Bacterial regulatory protein, arsR family JCM10941_07080 PF00403 Heavy-metal-associated domain JCM10941_07090 PF01174 SNO glutamine amidotransferase family JCM10941_07100 PF01336 OB-fold nucleic acid binding domain JCM10941_07100 PF00152 tRNA synthetases class II (D, K and N) JCM10941_07120 PF02567 Phenazine biosynthesis-like protein JCM10941_07130 PF01336 OB-fold nucleic acid binding domain JCM10941_07130 PF00152 tRNA synthetases class II (D, K and N) JCM10941_07130 PF02938 GAD domain JCM10941_07140 PF03129 Anticodon binding domain JCM10941_07140 PF13393 Histidyl-tRNA synthetase JCM10941_07160 PF00005 ABC transporter JCM10941_07160 PF08402 TOBE domain JCM10941_07170 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_07190 PF03167 Uracil DNA glycosylase superfamily JCM10941_07230 PF00815 Histidinol dehydrogenase JCM10941_07240 PF00117 Glutamine amidotransferase class-I JCM10941_07240 PF02540 NAD synthase JCM10941_07240 PF00958 GMP synthase C terminal domain JCM10941_07250 PF00082 Subtilase family JCM10941_07260 PF03816 Cell envelope-related transcriptional attenuator domain JCM10941_07270 PF00694 Aconitase C-terminal domain JCM10941_07270 PF00330 Aconitase family (aconitate hydratase) JCM10941_07300 PF00873 AcrB/AcrD/AcrF family JCM10941_07350 PF03471 Transporter associated domain JCM10941_07350 PF01595 Cyclin M transmembrane N-terminal domain JCM10941_07350 PF00571 CBS domain JCM10941_07360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JCM10941_07380 PF00701 Dihydrodipicolinate synthetase family JCM10941_07400 PF03315 Serine dehydratase beta chain JCM10941_07400 PF01842 ACT domain JCM10941_07410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM10941_07410 PF00672 HAMP domain JCM10941_07410 PF00512 His Kinase A (phospho-acceptor) domain JCM10941_07420 PF00679 Elongation factor G C-terminus JCM10941_07420 PF00009 Elongation factor Tu GTP binding domain JCM10941_07420 PF03144 Elongation factor Tu domain 2 JCM10941_07420 PF06421 GTP-binding protein LepA C-terminus JCM10941_07440 PF00535 Glycosyl transferase family 2 JCM10941_07480 PF01032 FecCD transport family JCM10941_07490 PF00005 ABC transporter JCM10941_07530 PF00144 Beta-lactamase JCM10941_07540 PF01212 Beta-eliminating lyase JCM10941_07550 PF18357 Diphteria toxin repressor SH3 domain JCM10941_07550 PF02742 Iron dependent repressor, metal binding and dimerisation domain JCM10941_07550 PF01325 Iron dependent repressor, N-terminal DNA binding domain JCM10941_07570 PF13026 Protein of unknown function (DUF3887) JCM10941_07570 PF12146 Serine aminopeptidase, S33 JCM10941_07600 PF00561 alpha/beta hydrolase fold JCM10941_07610 PF01053 Cys/Met metabolism PLP-dependent enzyme JCM10941_07640 PF08240 Alcohol dehydrogenase GroES-like domain JCM10941_07640 PF00107 Zinc-binding dehydrogenase JCM10941_07660 PF03576 Peptidase family S58 JCM10941_07670 PF03480 Bacterial extracellular solute-binding protein, family 7 JCM10941_07690 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JCM10941_07700 PF13180 PDZ domain JCM10941_07710 PF02190 ATP-dependent protease La (LON) substrate-binding domain JCM10941_07710 PF05362 Lon protease (S16) C-terminal proteolytic domain JCM10941_07710 PF00004 ATPase family associated with various cellular activities (AAA) JCM10941_07800 PF01180 Dihydroorotate dehydrogenase JCM10941_07820 PF01979 Amidohydrolase family JCM10941_07830 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCM10941_07830 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCM10941_07840 PF00156 Phosphoribosyl transferase domain JCM10941_07860 PF01925 Sulfite exporter TauE/SafE JCM10941_07870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCM10941_07870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCM10941_07890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCM10941_07890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCM10941_07890 PF02770 Acyl-CoA dehydrogenase, middle domain JCM10941_07900 PF00583 Acetyltransferase (GNAT) family JCM10941_07920 PF04079 Segregation and condensation complex subunit ScpB JCM10941_07930 PF03481 Putative GTP-binding controlling metal-binding JCM10941_07930 PF01300 Telomere recombination JCM10941_07940 PF00482 Type II secretion system (T2SS), protein F JCM10941_07970 PF02913 FAD linked oxidases, C-terminal domain JCM10941_07970 PF01565 FAD binding domain JCM10941_07980 PF00990 Diguanylate cyclase, GGDEF domain JCM10941_07990 PF02153 Prephenate dehydrogenase JCM10941_07990 PF01842 ACT domain JCM10941_08000 PF00793 DAHP synthetase I family JCM10941_08000 PF18152 DAHP synthase ferredoxin-like domain JCM10941_08010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCM10941_08020 PF04264 YceI-like domain JCM10941_08030 PF02621 Menaquinone biosynthesis JCM10941_08040 PF04055 Radical SAM superfamily JCM10941_08070 PF00356 Bacterial regulatory proteins, lacI family JCM10941_08080 PF02660 Glycerol-3-phosphate acyltransferase JCM10941_08090 PF01557 Fumarylacetoacetate (FAA) hydrolase family JCM10941_08110 PF00551 Formyl transferase JCM10941_08120 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JCM10941_08120 PF02844 Phosphoribosylglycinamide synthetase, N domain JCM10941_08120 PF02843 Phosphoribosylglycinamide synthetase, C domain JCM10941_08130 PF00929 Exonuclease JCM10941_08140 PF00072 Response regulator receiver domain JCM10941_08140 PF00486 Transcriptional regulatory protein, C terminal JCM10941_08150 PF17149 Periplasmic sensor domain found in signal transduction proteins JCM10941_08150 PF00072 Response regulator receiver domain JCM10941_08150 PF01627 Hpt domain JCM10941_08150 PF00512 His Kinase A (phospho-acceptor) domain JCM10941_08150 PF00672 HAMP domain JCM10941_08150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM10941_08190 PF00474 Sodium:solute symporter family JCM10941_08210 PF01709 Transcriptional regulator JCM10941_08220 PF00999 Sodium/hydrogen exchanger family JCM10941_08220 PF02254 TrkA-N domain JCM10941_08230 PF13462 Thioredoxin JCM10941_08240 PF17284 Spermidine synthase tetramerisation domain JCM10941_08250 PF02675 S-adenosylmethionine decarboxylase JCM10941_08260 PF17854 FtsK alpha domain JCM10941_08260 PF09397 Ftsk gamma domain JCM10941_08260 PF01580 FtsK/SpoIIIE family JCM10941_08290 PF00571 CBS domain JCM10941_08310 PF12627 Probable RNA and SrmB- binding site of polymerase A JCM10941_08310 PF01368 DHH family JCM10941_08310 PF00571 CBS domain JCM10941_08310 PF02272 DHHA1 domain JCM10941_08310 PF01743 Poly A polymerase head domain JCM10941_08330 PF02163 Peptidase family M50 JCM10941_08340 PF01261 Xylose isomerase-like TIM barrel JCM10941_08350 PF01925 Sulfite exporter TauE/SafE JCM10941_08360 PF00581 Rhodanese-like domain JCM10941_08370 PF00753 Metallo-beta-lactamase superfamily JCM10941_08390 PF00581 Rhodanese-like domain JCM10941_08400 PF08534 Redoxin JCM10941_08410 PF04293 SpoVR like protein JCM10941_08420 PF04285 Protein of unknown function (DUF444) JCM10941_08430 PF08298 PrkA AAA domain JCM10941_08430 PF06798 PrkA serine protein kinase C-terminal domain JCM10941_08480 PF02631 RecX family JCM10941_08500 PF04232 Stage V sporulation protein S (SpoVS) JCM10941_08510 PF01189 16S rRNA methyltransferase RsmB/F JCM10941_08510 PF01029 NusB family JCM10941_08520 PF03807 NADP oxidoreductase coenzyme F420-dependent JCM10941_08520 PF14748 Pyrroline-5-carboxylate reductase dimerisation JCM10941_08540 PF00535 Glycosyl transferase family 2 JCM10941_08550 PF17820 PDZ domain JCM10941_08550 PF02163 Peptidase family M50 JCM10941_08560 PF13288 DXP reductoisomerase C-terminal domain JCM10941_08560 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JCM10941_08560 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JCM10941_08580 PF01765 Ribosome recycling factor JCM10941_08590 PF00696 Amino acid kinase family JCM10941_08600 PF00889 Elongation factor TS JCM10941_08610 PF00318 Ribosomal protein S2 JCM10941_08620 PF00202 Aminotransferase class-III JCM10941_08630 PF00293 NUDIX domain JCM10941_08650 PF00171 Aldehyde dehydrogenase family JCM10941_08680 PF07736 Chorismate mutase type I JCM10941_08710 PF01979 Amidohydrolase family JCM10941_08730 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JCM10941_08730 PF13378 Enolase C-terminal domain-like JCM10941_08740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCM10941_08740 PF02403 Seryl-tRNA synthetase N-terminal domain JCM10941_08750 PF02686 Glu-tRNAGln amidotransferase C subunit JCM10941_08760 PF04474 Protein of unknown function (DUF554) JCM10941_08770 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JCM10941_08770 PF01266 FAD dependent oxidoreductase JCM10941_08780 PF01522 Polysaccharide deacetylase JCM10941_08790 PF07690 Major Facilitator Superfamily JCM10941_08800 PF00535 Glycosyl transferase family 2 JCM10941_08810 PF13439 Glycosyltransferase Family 4 JCM10941_08810 PF00534 Glycosyl transferases group 1 JCM10941_08840 PF00535 Glycosyl transferase family 2 JCM10941_08850 PF03275 UDP-galactopyranose mutase JCM10941_08860 PF00534 Glycosyl transferases group 1 JCM10941_08860 PF13439 Glycosyltransferase Family 4 JCM10941_08870 PF01470 Pyroglutamyl peptidase JCM10941_08880 PF02559 CarD-like/TRCF domain JCM10941_08880 PF00270 DEAD/DEAH box helicase JCM10941_08880 PF00271 Helicase conserved C-terminal domain JCM10941_08880 PF03461 TRCF domain JCM10941_08880 PF17757 UvrB interaction domain JCM10941_08890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCM10941_08890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCM10941_08890 PF00378 Enoyl-CoA hydratase/isomerase JCM10941_08900 PF02803 Thiolase, C-terminal domain JCM10941_08900 PF00108 Thiolase, N-terminal domain JCM10941_08910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCM10941_08910 PF02770 Acyl-CoA dehydrogenase, middle domain JCM10941_08910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCM10941_08920 PF09190 DALR domain JCM10941_08920 PF01406 tRNA synthetases class I (C) catalytic domain JCM10941_08930 PF01430 Hsp33 protein JCM10941_08940 PF00582 Universal stress protein family JCM10941_08950 PF04298 Putative neutral zinc metallopeptidase JCM10941_08980 PF06470 SMC proteins Flexible Hinge Domain JCM10941_08980 PF02463 RecF/RecN/SMC N terminal domain JCM10941_09000 PF01520 N-acetylmuramoyl-L-alanine amidase JCM10941_09000 PF11741 AMIN domain JCM10941_09010 PF01668 SmpB protein JCM10941_09020 PF00795 Carbon-nitrogen hydrolase JCM10941_09020 PF00583 Acetyltransferase (GNAT) family JCM10941_09030 PF02632 BioY family JCM10941_09040 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JCM10941_09040 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JCM10941_09050 PF00162 Phosphoglycerate kinase JCM10941_09060 PF02033 Ribosome-binding factor A JCM10941_09070 PF03061 Thioesterase superfamily JCM10941_09080 PF00202 Aminotransferase class-III JCM10941_09090 PF17876 Cold shock domain JCM10941_09090 PF08206 Ribonuclease B OB domain JCM10941_09090 PF00773 RNB domain JCM10941_09090 PF00575 S1 RNA binding domain JCM10941_09100 PF01548 Transposase JCM10941_09100 PF02371 Transposase IS116/IS110/IS902 family JCM10941_09110 PF01875 Memo-like protein JCM10941_09120 PF01966 HD domain JCM10941_09120 PF01743 Poly A polymerase head domain JCM10941_09120 PF12627 Probable RNA and SrmB- binding site of polymerase A JCM10941_09130 PF01121 Dephospho-CoA kinase JCM10941_09160 PF01467 Cytidylyltransferase-like JCM10941_09170 PF01808 AICARFT/IMPCHase bienzyme JCM10941_09170 PF02142 MGS-like domain JCM10941_09180 PF01926 50S ribosome-binding GTPase JCM10941_09180 PF12631 MnmE helical domain JCM10941_09180 PF10396 GTP-binding protein TrmE N-terminus JCM10941_09210 PF00202 Aminotransferase class-III JCM10941_09220 PF00893 Small Multidrug Resistance protein JCM10941_09250 PF02780 Transketolase, C-terminal domain JCM10941_09250 PF02779 Transketolase, pyrimidine binding domain JCM10941_09260 PF00676 Dehydrogenase E1 component JCM10941_09270 PF00155 Aminotransferase class I and II JCM10941_09280 PF00005 ABC transporter JCM10941_09340 PF00121 Triosephosphate isomerase JCM10941_09350 PF00487 Fatty acid desaturase JCM10941_09360 PF02580 D-Tyr-tRNA(Tyr) deacylase JCM10941_09370 PF02645 Uncharacterised protein, DegV family COG1307 JCM10941_09380 PF02645 Uncharacterised protein, DegV family COG1307 JCM10941_09390 PF01842 ACT domain JCM10941_09390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JCM10941_09390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCM10941_09430 PF13556 PucR C-terminal helix-turn-helix domain JCM10941_09430 PF17853 GGDEF-like domain JCM10941_09440 PF00701 Dihydrodipicolinate synthetase family JCM10941_09450 PF01557 Fumarylacetoacetate (FAA) hydrolase family JCM10941_09460 PF00171 Aldehyde dehydrogenase family JCM10941_09470 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JCM10941_09470 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JCM10941_09480 PF01613 Flavin reductase like domain JCM10941_09490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCM10941_09500 PF12399 Branched-chain amino acid ATP-binding cassette transporter JCM10941_09500 PF00005 ABC transporter JCM10941_09510 PF00005 ABC transporter JCM10941_09520 PF03061 Thioesterase superfamily JCM10941_09530 PF14535 AMP-binding enzyme C-terminal domain JCM10941_09530 PF00501 AMP-binding enzyme JCM10941_09550 PF01575 MaoC like domain JCM10941_09550 PF00171 Aldehyde dehydrogenase family JCM10941_09590 PF05138 Phenylacetic acid catabolic protein JCM10941_09610 PF00589 Phage integrase family JCM10941_09610 PF02899 Phage integrase, N-terminal SAM-like domain JCM10941_09620 PF00005 ABC transporter JCM10941_09620 PF08402 TOBE domain JCM10941_09630 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_09640 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_09670 PF01950 Fructose-1,6-bisphosphatase JCM10941_09680 PF01638 HxlR-like helix-turn-helix JCM10941_09690 PF00210 Ferritin-like domain JCM10941_09700 PF00890 FAD binding domain JCM10941_09700 PF02910 Fumarate reductase flavoprotein C-term JCM10941_09710 PF02445 Quinolinate synthetase A protein JCM10941_09720 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JCM10941_09720 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JCM10941_09730 PF03190 Protein of unknown function, DUF255 JCM10941_09740 PF00108 Thiolase, N-terminal domain JCM10941_09740 PF02803 Thiolase, C-terminal domain JCM10941_09750 PF02682 Carboxyltransferase domain, subdomain C and D JCM10941_09760 PF00990 Diguanylate cyclase, GGDEF domain JCM10941_09770 PF11871 Domain of unknown function (DUF3391) JCM10941_09770 PF01966 HD domain JCM10941_09780 PF00294 pfkB family carbohydrate kinase JCM10941_09810 PF00072 Response regulator receiver domain JCM10941_09810 PF01966 HD domain JCM10941_09820 PF00171 Aldehyde dehydrogenase family JCM10941_09830 PF13089 Polyphosphate kinase N-terminal domain JCM10941_09830 PF13090 Polyphosphate kinase C-terminal domain 2 JCM10941_09830 PF02503 Polyphosphate kinase middle domain JCM10941_09830 PF17941 Polyphosphate kinase C-terminal domain 1 JCM10941_09840 PF13361 UvrD-like helicase C-terminal domain JCM10941_09840 PF00580 UvrD/REP helicase N-terminal domain JCM10941_09880 PF00072 Response regulator receiver domain JCM10941_09880 PF00486 Transcriptional regulatory protein, C terminal JCM10941_09890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM10941_09890 PF00672 HAMP domain JCM10941_09890 PF00512 His Kinase A (phospho-acceptor) domain JCM10941_09920 PF13533 Biotin-lipoyl like JCM10941_09930 PF00005 ABC transporter JCM10941_09940 PF00005 ABC transporter JCM10941_09940 PF02687 FtsX-like permease family JCM10941_09940 PF12704 MacB-like periplasmic core domain JCM10941_10040 PF00872 Transposase, Mutator family JCM10941_10060 PF00271 Helicase conserved C-terminal domain JCM10941_10060 PF00176 SNF2 family N-terminal domain JCM10941_10130 PF14659 Phage integrase, N-terminal SAM-like domain JCM10941_10130 PF00589 Phage integrase family JCM10941_10140 PF00581 Rhodanese-like domain JCM10941_10150 PF03313 Serine dehydratase alpha chain JCM10941_10160 PF00196 Bacterial regulatory proteins, luxR family JCM10941_10160 PF00072 Response regulator receiver domain JCM10941_10170 PF01245 Ribosomal protein L19 JCM10941_10180 PF01746 tRNA (Guanine-1)-methyltransferase JCM10941_10190 PF05239 PRC-barrel domain JCM10941_10190 PF01782 RimM N-terminal domain JCM10941_10210 PF00886 Ribosomal protein S16 JCM10941_10220 PF02978 Signal peptide binding domain JCM10941_10220 PF02881 SRP54-type protein, helical bundle domain JCM10941_10220 PF00448 SRP54-type protein, GTPase domain JCM10941_10240 PF02310 B12 binding domain JCM10941_10250 PF01642 Methylmalonyl-CoA mutase JCM10941_10250 PF02310 B12 binding domain JCM10941_10260 PF16916 Dimerisation domain of Zinc Transporter JCM10941_10260 PF01545 Cation efflux family JCM10941_10270 PF01336 OB-fold nucleic acid binding domain JCM10941_10270 PF00152 tRNA synthetases class II (D, K and N) JCM10941_10280 PF03449 Transcription elongation factor, N-terminal JCM10941_10280 PF01272 Transcription elongation factor, GreA/GreB, C-term JCM10941_10300 PF01219 Prokaryotic diacylglycerol kinase JCM10941_10310 PF02130 Uncharacterized protein family UPF0054 JCM10941_10320 PF02562 PhoH-like protein JCM10941_10340 PF12127 SigmaW regulon antibacterial JCM10941_10360 PF01488 Shikimate / quinate 5-dehydrogenase JCM10941_10360 PF08501 Shikimate dehydrogenase substrate binding domain JCM10941_10360 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JCM10941_10390 PF01205 Uncharacterized protein family UPF0029 JCM10941_10400 PF01367 5'-3' exonuclease, C-terminal SAM fold JCM10941_10400 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JCM10941_10400 PF00476 DNA polymerase family A JCM10941_10400 PF09281 Taq polymerase, exonuclease JCM10941_10420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCM10941_10420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCM10941_10420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCM10941_10420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCM10941_10440 PF02547 Queuosine biosynthesis protein JCM10941_10450 PF03747 ADP-ribosylglycohydrolase JCM10941_10460 PF01769 Divalent cation transporter JCM10941_10460 PF00571 CBS domain JCM10941_10460 PF03448 MgtE intracellular N domain JCM10941_10480 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JCM10941_10480 PF00925 GTP cyclohydrolase II JCM10941_10490 PF00677 Lumazine binding domain JCM10941_10500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JCM10941_10500 PF01872 RibD C-terminal domain JCM10941_10510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCM10941_10510 PF07498 Rho termination factor, N-terminal domain JCM10941_10510 PF07497 Rho termination factor, RNA-binding domain JCM10941_10520 PF00923 Transaldolase/Fructose-6-phosphate aldolase JCM10941_10530 PF08264 Anticodon-binding domain of tRNA JCM10941_10530 PF00133 tRNA synthetases class I (I, L, M and V) JCM10941_10540 PF01321 Creatinase/Prolidase N-terminal domain JCM10941_10540 PF00557 Metallopeptidase family M24 JCM10941_10560 PF01551 Peptidase family M23 JCM10941_10580 PF01008 Initiation factor 2 subunit family JCM10941_10590 PF01197 Ribosomal protein L31 JCM10941_10610 PF02381 MraZ protein, putative antitoxin-like JCM10941_10620 PF01795 MraW methylase family JCM10941_10640 PF03793 PASTA domain JCM10941_10640 PF03717 Penicillin-binding Protein dimerisation domain JCM10941_10640 PF00905 Penicillin binding protein transpeptidase domain JCM10941_10650 PF02875 Mur ligase family, glutamate ligase domain JCM10941_10650 PF08245 Mur ligase middle domain JCM10941_10650 PF01225 Mur ligase family, catalytic domain JCM10941_10670 PF00953 Glycosyl transferase family 4 JCM10941_10680 PF08245 Mur ligase middle domain JCM10941_10680 PF02875 Mur ligase family, glutamate ligase domain JCM10941_10690 PF01098 Cell cycle protein JCM10941_10700 PF03033 Glycosyltransferase family 28 N-terminal domain JCM10941_10700 PF04101 Glycosyltransferase family 28 C-terminal domain JCM10941_10710 PF08245 Mur ligase middle domain JCM10941_10710 PF02875 Mur ligase family, glutamate ligase domain JCM10941_10710 PF01225 Mur ligase family, catalytic domain JCM10941_10720 PF01565 FAD binding domain JCM10941_10720 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JCM10941_10740 PF02491 SHS2 domain inserted in FTSA JCM10941_10750 PF12327 FtsZ family, C-terminal domain JCM10941_10750 PF00091 Tubulin/FtsZ family, GTPase domain JCM10941_10760 PF02075 Crossover junction endodeoxyribonuclease RuvC JCM10941_10780 PF04055 Radical SAM superfamily JCM10941_10800 PF00290 Tryptophan synthase alpha chain JCM10941_10810 PF00291 Pyridoxal-phosphate dependent enzyme JCM10941_10820 PF02511 Thymidylate synthase complementing protein JCM10941_10830 PF00533 BRCA1 C Terminus (BRCT) domain JCM10941_10830 PF01653 NAD-dependent DNA ligase adenylation domain JCM10941_10830 PF03120 NAD-dependent DNA ligase OB-fold domain JCM10941_10830 PF12826 Helix-hairpin-helix motif JCM10941_10840 PF02608 ABC transporter substrate-binding protein PnrA-like JCM10941_10850 PF00005 ABC transporter JCM10941_10900 PF01842 ACT domain JCM10941_10900 PF01817 Chorismate mutase type II JCM10941_10900 PF00800 Prephenate dehydratase JCM10941_10950 PF13439 Glycosyltransferase Family 4 JCM10941_10950 PF00534 Glycosyl transferases group 1 JCM10941_10960 PF00004 ATPase family associated with various cellular activities (AAA) JCM10941_10960 PF05362 Lon protease (S16) C-terminal proteolytic domain JCM10941_10960 PF02190 ATP-dependent protease La (LON) substrate-binding domain JCM10941_10980 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JCM10941_10980 PF00056 lactate/malate dehydrogenase, NAD binding domain JCM10941_10990 PF00756 Putative esterase JCM10941_11000 PF03741 Integral membrane protein TerC family JCM10941_11020 PF02754 Cysteine-rich domain JCM10941_11020 PF13183 4Fe-4S dicluster domain JCM10941_11040 PF02681 Divergent PAP2 family JCM10941_11050 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JCM10941_11050 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JCM10941_11060 PF01029 NusB family JCM10941_11080 PF02785 Biotin carboxylase C-terminal domain JCM10941_11080 PF00289 Biotin carboxylase, N-terminal domain JCM10941_11080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JCM10941_11090 PF00364 Biotin-requiring enzyme JCM10941_11100 PF01132 Elongation factor P (EF-P) OB domain JCM10941_11100 PF08207 Elongation factor P (EF-P) KOW-like domain JCM10941_11100 PF09285 Elongation factor P, C-terminal JCM10941_11140 PF00491 Arginase family JCM10941_11170 PF00025 ADP-ribosylation factor family JCM10941_11180 PF08113 Cytochrome c oxidase subunit IIa family JCM10941_11190 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JCM10941_11190 PF09125 Cytochrome C oxidase subunit II, transmembrane JCM10941_11200 PF00115 Cytochrome C and Quinol oxidase polypeptide I JCM10941_11220 PF07690 Major Facilitator Superfamily JCM10941_11230 PF00312 Ribosomal protein S15 JCM10941_11240 PF03725 3' exoribonuclease family, domain 2 JCM10941_11240 PF00013 KH domain JCM10941_11240 PF00575 S1 RNA binding domain JCM10941_11240 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JCM10941_11240 PF01138 3' exoribonuclease family, domain 1 JCM10941_11250 PF12706 Beta-lactamase superfamily domain JCM10941_11250 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JCM10941_11250 PF17770 Ribonuclease J C-terminal domain JCM10941_11260 PF00689 Cation transporting ATPase, C-terminus JCM10941_11260 PF00690 Cation transporter/ATPase, N-terminus JCM10941_11270 PF00072 Response regulator receiver domain JCM10941_11270 PF00486 Transcriptional regulatory protein, C terminal JCM10941_11280 PF00989 PAS fold JCM10941_11280 PF16736 Single Cache-like JCM10941_11280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM10941_11280 PF00512 His Kinase A (phospho-acceptor) domain JCM10941_11290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCM10941_11290 PF02770 Acyl-CoA dehydrogenase, middle domain JCM10941_11290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCM10941_11300 PF01012 Electron transfer flavoprotein domain JCM10941_11310 PF01012 Electron transfer flavoprotein domain JCM10941_11310 PF00766 Electron transfer flavoprotein FAD-binding domain JCM10941_11330 PF01039 Carboxyl transferase domain JCM10941_11340 PF03167 Uracil DNA glycosylase superfamily JCM10941_11350 PF14716 Helix-hairpin-helix domain JCM10941_11350 PF02811 PHP domain JCM10941_11350 PF14791 DNA polymerase beta thumb JCM10941_11380 PF02073 Thermophilic metalloprotease (M29) JCM10941_11390 PF00403 Heavy-metal-associated domain JCM10941_11390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCM10941_11390 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM10941_11410 PF13411 MerR HTH family regulatory protein JCM10941_11420 PF01053 Cys/Met metabolism PLP-dependent enzyme JCM10941_11430 PF16868 NMT1-like family JCM10941_11450 PF00005 ABC transporter JCM10941_11470 PF01734 Patatin-like phospholipase JCM10941_11480 PF12728 Helix-turn-helix domain JCM10941_11500 PF00218 Indole-3-glycerol phosphate synthase JCM10941_11510 PF00977 Histidine biosynthesis protein JCM10941_11530 PF02272 DHHA1 domain JCM10941_11530 PF17768 RecJ OB domain JCM10941_11530 PF01368 DHH family JCM10941_11550 PF08264 Anticodon-binding domain of tRNA JCM10941_11550 PF00133 tRNA synthetases class I (I, L, M and V) JCM10941_11550 PF10458 Valyl tRNA synthetase tRNA binding arm JCM10941_11560 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_11570 PF00497 Bacterial extracellular solute-binding proteins, family 3 JCM10941_11580 PF00343 Carbohydrate phosphorylase JCM10941_11580 PF11897 Protein of unknown function (DUF3417) JCM10941_11590 PF02386 Cation transport protein JCM10941_11600 PF02080 TrkA-C domain JCM10941_11600 PF02254 TrkA-N domain JCM10941_11610 PF18693 TRAM domain JCM10941_11610 PF04055 Radical SAM superfamily JCM10941_11610 PF00919 Uncharacterized protein family UPF0004 JCM10941_11620 PF13464 Domain of unknown function (DUF4115) JCM10941_11630 PF04227 Indigoidine synthase A like protein JCM10941_11650 PF03881 Fructosamine kinase JCM10941_11660 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCM10941_11670 PF17200 Single Cache domain 2 JCM10941_11670 PF07730 Histidine kinase JCM10941_11680 PF00588 SpoU rRNA Methylase family JCM10941_11690 PF17092 Penicillin-binding protein OB-like domain JCM10941_11690 PF00912 Transglycosylase JCM10941_11690 PF00905 Penicillin binding protein transpeptidase domain JCM10941_11710 PF06071 Protein of unknown function (DUF933) JCM10941_11710 PF01926 50S ribosome-binding GTPase JCM10941_11720 PF01791 DeoC/LacD family aldolase JCM10941_11740 PF02545 Maf-like protein JCM10941_11770 PF00905 Penicillin binding protein transpeptidase domain JCM10941_11770 PF03717 Penicillin-binding Protein dimerisation domain JCM10941_11790 PF04238 Protein of unknown function (DUF420) JCM10941_11820 PF01960 ArgJ family JCM10941_11830 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCM10941_11830 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCM10941_11850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JCM10941_11850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JCM10941_11890 PF02660 Glycerol-3-phosphate acyltransferase JCM10941_11910 PF00005 ABC transporter JCM10941_11940 PF00682 HMGL-like JCM10941_11940 PF08502 LeuA allosteric (dimerisation) domain JCM10941_11960 PF08502 LeuA allosteric (dimerisation) domain JCM10941_11960 PF00682 HMGL-like JCM10941_11970 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JCM10941_11970 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JCM10941_11980 PF10369 Small subunit of acetolactate synthase JCM10941_11990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCM10941_11990 PF00205 Thiamine pyrophosphate enzyme, central domain JCM10941_11990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JCM10941_12010 PF12019 Type II transport protein GspH JCM10941_12010 PF07963 Prokaryotic N-terminal methylation motif JCM10941_12060 PF07963 Prokaryotic N-terminal methylation motif JCM10941_12120 PF00579 tRNA synthetases class I (W and Y) JCM10941_12130 PF00330 Aconitase family (aconitate hydratase) JCM10941_12140 PF00694 Aconitase C-terminal domain JCM10941_12150 PF00180 Isocitrate/isopropylmalate dehydrogenase JCM10941_12180 PF00106 short chain dehydrogenase JCM10941_12190 PF00920 Dehydratase family JCM10941_12210 PF13416 Bacterial extracellular solute-binding protein JCM10941_12220 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_12230 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_12240 PF00005 ABC transporter JCM10941_12240 PF08402 TOBE domain JCM10941_12250 PF01098 Cell cycle protein JCM10941_12260 PF03776 Septum formation topological specificity factor MinE JCM10941_12270 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JCM10941_12280 PF01638 HxlR-like helix-turn-helix JCM10941_12300 PF01642 Methylmalonyl-CoA mutase JCM10941_12300 PF02310 B12 binding domain JCM10941_12320 PF13193 AMP-binding enzyme C-terminal domain JCM10941_12320 PF16177 Acetyl-coenzyme A synthetase N-terminus JCM10941_12320 PF00501 AMP-binding enzyme JCM10941_12330 PF16177 Acetyl-coenzyme A synthetase N-terminus JCM10941_12330 PF00501 AMP-binding enzyme JCM10941_12330 PF13193 AMP-binding enzyme C-terminal domain JCM10941_12340 PF00501 AMP-binding enzyme JCM10941_12340 PF16177 Acetyl-coenzyme A synthetase N-terminus JCM10941_12340 PF13193 AMP-binding enzyme C-terminal domain JCM10941_12350 PF07516 SecA Wing and Scaffold domain JCM10941_12350 PF07517 SecA DEAD-like domain JCM10941_12350 PF01043 SecA preprotein cross-linking domain JCM10941_12360 PF00814 Glycoprotease family JCM10941_12400 PF01906 Putative heavy-metal-binding JCM10941_12410 PF00270 DEAD/DEAH box helicase JCM10941_12410 PF09369 Domain of unknown function (DUF1998) JCM10941_12410 PF00271 Helicase conserved C-terminal domain JCM10941_12430 PF16701 Adenylate cyclase regulatory domain JCM10941_12430 PF00211 Adenylate and Guanylate cyclase catalytic domain JCM10941_12440 PF13662 Toprim domain JCM10941_12440 PF08275 DNA primase catalytic core, N-terminal domain JCM10941_12440 PF01807 CHC2 zinc finger JCM10941_12450 PF02446 4-alpha-glucanotransferase JCM10941_12460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JCM10941_12460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JCM10941_12470 PF00675 Insulinase (Peptidase family M16) JCM10941_12470 PF05193 Peptidase M16 inactive domain JCM10941_12480 PF05193 Peptidase M16 inactive domain JCM10941_12490 PF00270 DEAD/DEAH box helicase JCM10941_12490 PF00271 Helicase conserved C-terminal domain JCM10941_12490 PF17191 RecG wedge domain JCM10941_12520 PF00872 Transposase, Mutator family JCM10941_12540 PF01813 ATP synthase subunit D JCM10941_12550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCM10941_12550 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCM10941_12560 PF16886 ATPsynthase alpha/beta subunit N-term extension JCM10941_12560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JCM10941_12560 PF02874 ATP synthase alpha/beta family, beta-barrel domain JCM10941_12570 PF01990 ATP synthase (F/14-kDa) subunit JCM10941_12580 PF01992 ATP synthase (C/AC39) subunit JCM10941_12590 PF01991 ATP synthase (E/31 kDa) subunit JCM10941_12610 PF01496 V-type ATPase 116kDa subunit family JCM10941_12610 PF18670 V-type ATPase subunit I, N-terminal domain JCM10941_12630 PF10672 S-adenosylmethionine-dependent methyltransferase JCM10941_12630 PF17785 PUA-like domain JCM10941_12670 PF00211 Adenylate and Guanylate cyclase catalytic domain JCM10941_12670 PF00069 Protein kinase domain JCM10941_12680 PF16177 Acetyl-coenzyme A synthetase N-terminus JCM10941_12680 PF00501 AMP-binding enzyme JCM10941_12680 PF13193 AMP-binding enzyme C-terminal domain JCM10941_12690 PF03023 Lipid II flippase MurJ JCM10941_12710 PF13476 AAA domain JCM10941_12720 PF00149 Calcineurin-like phosphoesterase JCM10941_12720 PF12320 Type 5 capsule protein repressor C-terminal domain JCM10941_12760 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JCM10941_12760 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JCM10941_12770 PF00005 ABC transporter JCM10941_12780 PF03572 Peptidase family S41 JCM10941_12780 PF01471 Putative peptidoglycan binding domain JCM10941_12780 PF17820 PDZ domain JCM10941_12800 PF00133 tRNA synthetases class I (I, L, M and V) JCM10941_12800 PF09334 tRNA synthetases class I (M) JCM10941_12800 PF01588 Putative tRNA binding domain JCM10941_12810 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JCM10941_12820 PF00578 AhpC/TSA family JCM10941_12830 PF02608 ABC transporter substrate-binding protein PnrA-like JCM10941_12840 PF02653 Branched-chain amino acid transport system / permease component JCM10941_12850 PF02653 Branched-chain amino acid transport system / permease component JCM10941_12860 PF00005 ABC transporter JCM10941_12870 PF12804 MobA-like NTP transferase domain JCM10941_12890 PF04055 Radical SAM superfamily JCM10941_12890 PF01938 TRAM domain JCM10941_12890 PF00919 Uncharacterized protein family UPF0004 JCM10941_12940 PF00953 Glycosyl transferase family 4 JCM10941_12950 PF02350 UDP-N-acetylglucosamine 2-epimerase JCM10941_12970 PF00571 CBS domain JCM10941_12970 PF02163 Peptidase family M50 JCM10941_12990 PF16868 NMT1-like family JCM10941_13020 PF13180 PDZ domain JCM10941_13020 PF17820 PDZ domain JCM10941_13030 PF00551 Formyl transferase JCM10941_13030 PF01842 ACT domain JCM10941_13040 PF03737 Aldolase/RraA JCM10941_13050 PF01119 DNA mismatch repair protein, C-terminal domain JCM10941_13050 PF08676 MutL C terminal dimerisation domain JCM10941_13060 PF01624 MutS domain I JCM10941_13060 PF05188 MutS domain II JCM10941_13060 PF05190 MutS family domain IV JCM10941_13060 PF00488 MutS domain V JCM10941_13060 PF05192 MutS domain III JCM10941_13080 PF00034 Cytochrome c JCM10941_13100 PF02872 5'-nucleotidase, C-terminal domain JCM10941_13100 PF00149 Calcineurin-like phosphoesterase JCM10941_13110 PF03951 Glutamine synthetase, beta-Grasp domain JCM10941_13110 PF00120 Glutamine synthetase, catalytic domain JCM10941_13120 PF13458 Periplasmic binding protein JCM10941_13130 PF02653 Branched-chain amino acid transport system / permease component JCM10941_13140 PF02653 Branched-chain amino acid transport system / permease component JCM10941_13140 PF11862 Domain of unknown function (DUF3382) JCM10941_13150 PF00005 ABC transporter JCM10941_13150 PF12399 Branched-chain amino acid ATP-binding cassette transporter JCM10941_13160 PF00005 ABC transporter JCM10941_13170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCM10941_13180 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_13190 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_13190 PF12911 N-terminal TM domain of oligopeptide transport permease C JCM10941_13210 PF08245 Mur ligase middle domain JCM10941_13220 PF00664 ABC transporter transmembrane region JCM10941_13220 PF00005 ABC transporter JCM10941_13230 PF00664 ABC transporter transmembrane region JCM10941_13230 PF00005 ABC transporter JCM10941_13240 PF00285 Citrate synthase, C-terminal domain JCM10941_13250 PF00899 ThiF family JCM10941_13260 PF01238 Phosphomannose isomerase type I JCM10941_13280 PF04493 Endonuclease V JCM10941_13300 PF00216 Bacterial DNA-binding protein JCM10941_13330 PF00196 Bacterial regulatory proteins, luxR family JCM10941_13330 PF00072 Response regulator receiver domain JCM10941_13340 PF05958 tRNA (Uracil-5-)-methyltransferase JCM10941_13350 PF01220 Dehydroquinase class II JCM10941_13360 PF00521 DNA gyrase/topoisomerase IV, subunit A JCM10941_13360 PF03989 DNA gyrase C-terminal domain, beta-propeller JCM10941_13370 PF03091 CutA1 divalent ion tolerance protein JCM10941_13400 PF00027 Cyclic nucleotide-binding domain JCM10941_13400 PF13545 Crp-like helix-turn-helix domain JCM10941_13430 PF00072 Response regulator receiver domain JCM10941_13430 PF00486 Transcriptional regulatory protein, C terminal JCM10941_13440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM10941_13440 PF00672 HAMP domain JCM10941_13440 PF00512 His Kinase A (phospho-acceptor) domain JCM10941_13460 PF02754 Cysteine-rich domain JCM10941_13470 PF11870 Domain of unknown function (DUF3390) JCM10941_13470 PF13183 4Fe-4S dicluster domain JCM10941_13470 PF02589 LUD domain JCM10941_13480 PF02589 LUD domain JCM10941_13490 PF10502 Signal peptidase, peptidase S26 JCM10941_13500 PF01734 Patatin-like phospholipase JCM10941_13510 PF00069 Protein kinase domain JCM10941_13510 PF03793 PASTA domain JCM10941_13530 PF01520 N-acetylmuramoyl-L-alanine amidase JCM10941_13550 PF03309 Type III pantothenate kinase JCM10941_13570 PF00072 Response regulator receiver domain JCM10941_13590 PF00180 Isocitrate/isopropylmalate dehydrogenase JCM10941_13600 PF11104 Type IV pilus assembly protein PilM; JCM10941_13640 PF00263 Bacterial type II and III secretion system protein JCM10941_13640 PF03958 Bacterial type II/III secretion system short domain JCM10941_13650 PF01264 Chorismate synthase JCM10941_13660 PF01202 Shikimate kinase JCM10941_13670 PF01761 3-dehydroquinate synthase JCM10941_13680 PF01189 16S rRNA methyltransferase RsmB/F JCM10941_13680 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JCM10941_13680 PF17126 RsmF rRNA methyltransferase first C-terminal domain JCM10941_13690 PF01648 4'-phosphopantetheinyl transferase superfamily JCM10941_13720 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JCM10941_13720 PF01926 50S ribosome-binding GTPase JCM10941_13730 PF02146 Sir2 family JCM10941_13740 PF01256 Carbohydrate kinase JCM10941_13740 PF03853 YjeF-related protein N-terminus JCM10941_13750 PF08544 GHMP kinases C terminal JCM10941_13750 PF00288 GHMP kinases N terminal domain JCM10941_13770 PF01649 Ribosomal protein S20 JCM10941_13790 PF00579 tRNA synthetases class I (W and Y) JCM10941_13800 PF00355 Rieske [2Fe-2S] domain JCM10941_13820 PF03918 Cytochrome C biogenesis protein JCM10941_13830 PF08534 Redoxin JCM10941_13840 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JCM10941_13840 PF01578 Cytochrome C assembly protein JCM10941_13850 PF03100 CcmE JCM10941_13860 PF01578 Cytochrome C assembly protein JCM10941_13870 PF03379 CcmB protein JCM10941_13880 PF00005 ABC transporter JCM10941_13890 PF02683 Cytochrome C biogenesis protein transmembrane region JCM10941_13900 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JCM10941_13910 PF00174 Oxidoreductase molybdopterin binding domain JCM10941_13920 PF10518 TAT (twin-arginine translocation) pathway signal sequence JCM10941_13920 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM10941_13920 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding JCM10941_13970 PF00149 Calcineurin-like phosphoesterase JCM10941_13970 PF02872 5'-nucleotidase, C-terminal domain JCM10941_14030 PF00034 Cytochrome c JCM10941_14040 PF00005 ABC transporter JCM10941_14040 PF08402 TOBE domain JCM10941_14070 PF00580 UvrD/REP helicase N-terminal domain JCM10941_14070 PF13361 UvrD-like helicase C-terminal domain JCM10941_14080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JCM10941_14080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JCM10941_14080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JCM10941_14080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JCM10941_14100 PF00501 AMP-binding enzyme JCM10941_14100 PF13193 AMP-binding enzyme C-terminal domain JCM10941_14110 PF07311 Dodecin JCM10941_14140 PF00378 Enoyl-CoA hydratase/isomerase JCM10941_14150 PF01048 Phosphorylase superfamily JCM10941_14160 PF00005 ABC transporter JCM10941_14170 PF00027 Cyclic nucleotide-binding domain JCM10941_14170 PF13545 Crp-like helix-turn-helix domain JCM10941_14180 PF04029 2-phosphosulpholactate phosphatase JCM10941_14200 PF17755 UvrA DNA-binding domain JCM10941_14200 PF17760 UvrA interaction domain JCM10941_14200 PF00005 ABC transporter JCM10941_14220 PF01134 Glucose inhibited division protein A JCM10941_14240 PF00977 Histidine biosynthesis protein JCM10941_14250 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JCM10941_14250 PF01502 Phosphoribosyl-AMP cyclohydrolase JCM10941_14260 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JCM10941_14270 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JCM10941_14270 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JCM10941_14280 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JCM10941_14280 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JCM10941_14290 PF01026 TatD related DNase JCM10941_14300 PF13091 PLD-like domain JCM10941_14300 PF13396 Phospholipase_D-nuclease N-terminal JCM10941_14320 PF00152 tRNA synthetases class II (D, K and N) JCM10941_14320 PF01336 OB-fold nucleic acid binding domain JCM10941_14330 PF13085 2Fe-2S iron-sulfur cluster binding domain JCM10941_14340 PF00890 FAD binding domain JCM10941_14340 PF02910 Fumarate reductase flavoprotein C-term JCM10941_14360 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JCM10941_14370 PF02675 S-adenosylmethionine decarboxylase JCM10941_14390 PF00005 ABC transporter JCM10941_14420 PF01738 Dienelactone hydrolase family JCM10941_14420 PF00156 Phosphoribosyl transferase domain JCM10941_14430 PF13193 AMP-binding enzyme C-terminal domain JCM10941_14430 PF00501 AMP-binding enzyme JCM10941_14440 PF00380 Ribosomal protein S9/S16 JCM10941_14450 PF00572 Ribosomal protein L13 JCM10941_14460 PF06418 CTP synthase N-terminus JCM10941_14460 PF00117 Glutamine amidotransferase class-I JCM10941_14480 PF00310 Glutamine amidotransferases class-II JCM10941_14480 PF04898 Glutamate synthase central domain JCM10941_14480 PF01493 GXGXG motif JCM10941_14480 PF01645 Conserved region in glutamate synthase JCM10941_14500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JCM10941_14510 PF03796 DnaB-like helicase C terminal domain JCM10941_14510 PF00772 DnaB-like helicase N terminal domain JCM10941_14520 PF01464 Transglycosylase SLT domain JCM10941_14530 PF00999 Sodium/hydrogen exchanger family JCM10941_14540 PF00571 CBS domain JCM10941_14540 PF02272 DHHA1 domain JCM10941_14540 PF01743 Poly A polymerase head domain JCM10941_14540 PF01368 DHH family JCM10941_14570 PF00999 Sodium/hydrogen exchanger family JCM10941_14580 PF02080 TrkA-C domain JCM10941_14600 PF09123 Domain of unknown function (DUF1931) JCM10941_14620 PF00085 Thioredoxin JCM10941_14680 PF00004 ATPase family associated with various cellular activities (AAA) JCM10941_14680 PF02861 Clp amino terminal domain, pathogenicity island component JCM10941_14680 PF10431 C-terminal, D2-small domain, of ClpB protein JCM10941_14680 PF17871 AAA lid domain JCM10941_14680 PF07724 AAA domain (Cdc48 subfamily) JCM10941_14700 PF00226 DnaJ domain JCM10941_14700 PF01556 DnaJ C terminal domain JCM10941_14710 PF01025 GrpE JCM10941_14720 PF00012 Hsp70 protein JCM10941_14730 PF01434 Peptidase family M41 JCM10941_14730 PF17862 AAA+ lid domain JCM10941_14730 PF06480 FtsH Extracellular JCM10941_14730 PF00004 ATPase family associated with various cellular activities (AAA) JCM10941_14740 PF10672 S-adenosylmethionine-dependent methyltransferase JCM10941_14740 PF17785 PUA-like domain JCM10941_14750 PF01343 Peptidase family S49 JCM10941_14770 PF00491 Arginase family JCM10941_14780 PF14464 Prokaryotic homologs of the JAB domain JCM10941_14790 PF14492 Elongation Factor G, domain II JCM10941_14790 PF00679 Elongation factor G C-terminus JCM10941_14790 PF03144 Elongation factor Tu domain 2 JCM10941_14790 PF03764 Elongation factor G, domain IV JCM10941_14790 PF00009 Elongation factor Tu GTP binding domain JCM10941_14800 PF07726 ATPase family associated with various cellular activities (AAA) JCM10941_14800 PF17863 AAA lid domain JCM10941_14810 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JCM10941_14810 PF00391 PEP-utilising enzyme, mobile domain JCM10941_14810 PF02896 PEP-utilising enzyme, TIM barrel domain JCM10941_14820 PF03006 Haemolysin-III related JCM10941_14830 PF00072 Response regulator receiver domain JCM10941_14830 PF00486 Transcriptional regulatory protein, C terminal JCM10941_14840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM10941_14840 PF00512 His Kinase A (phospho-acceptor) domain JCM10941_14840 PF00672 HAMP domain JCM10941_14870 PF01488 Shikimate / quinate 5-dehydrogenase JCM10941_14870 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JCM10941_14890 PF02627 Carboxymuconolactone decarboxylase family JCM10941_14900 PF13419 Haloacid dehalogenase-like hydrolase JCM10941_14940 PF00206 Lyase JCM10941_14940 PF10397 Adenylosuccinate lyase C-terminus JCM10941_14960 PF01259 SAICAR synthetase JCM10941_15000 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JCM10941_15000 PF02769 AIR synthase related protein, C-terminal domain JCM10941_15000 PF00586 AIR synthase related protein, N-terminal domain JCM10941_15010 PF13537 Glutamine amidotransferase domain JCM10941_15010 PF00156 Phosphoribosyl transferase domain JCM10941_15020 PF02926 THUMP domain JCM10941_15020 PF01170 Putative RNA methylase family UPF0020 JCM10941_15030 PF00350 Dynamin family JCM10941_15050 PF00464 Serine hydroxymethyltransferase JCM10941_15060 PF02463 RecF/RecN/SMC N terminal domain JCM10941_15070 PF00682 HMGL-like JCM10941_15080 PF08240 Alcohol dehydrogenase GroES-like domain JCM10941_15080 PF00107 Zinc-binding dehydrogenase JCM10941_15120 PF01142 tRNA pseudouridine synthase D (TruD) JCM10941_15150 PF00773 RNB domain JCM10941_15160 PF00180 Isocitrate/isopropylmalate dehydrogenase JCM10941_15160 PF18324 Hypothetical protein TT1725 JCM10941_15170 PF01266 FAD dependent oxidoreductase JCM10941_15200 PF02899 Phage integrase, N-terminal SAM-like domain JCM10941_15200 PF00589 Phage integrase family JCM10941_15240 PF14437 MafB19-like deaminase JCM10941_15240 PF01171 PP-loop family JCM10941_15280 PF03061 Thioesterase superfamily JCM10941_15300 PF02151 UvrB/uvrC motif JCM10941_15300 PF08459 UvrC Helix-hairpin-helix N-terminal JCM10941_15300 PF01541 GIY-YIG catalytic domain JCM10941_15310 PF14572 Phosphoribosyl synthetase-associated domain JCM10941_15310 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCM10941_15320 PF01048 Phosphorylase superfamily JCM10941_15330 PF02664 S-Ribosylhomocysteinase (LuxS) JCM10941_15340 PF00117 Glutamine amidotransferase class-I JCM10941_15340 PF00958 GMP synthase C terminal domain JCM10941_15350 PF05685 Putative restriction endonuclease JCM10941_15360 PF08734 GYD domain JCM10941_15370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCM10941_15380 PF00075 RNase H JCM10941_15390 PF01039 Carboxyl transferase domain JCM10941_15400 PF01914 MarC family integral membrane protein JCM10941_15410 PF01316 Arginine repressor, DNA binding domain JCM10941_15410 PF02863 Arginine repressor, C-terminal domain JCM10941_15420 PF04127 DNA / pantothenate metabolism flavoprotein JCM10941_15420 PF02441 Flavoprotein JCM10941_15430 PF01192 RNA polymerase Rpb6 JCM10941_15440 PF00625 Guanylate kinase JCM10941_15450 PF00128 Alpha amylase, catalytic domain JCM10941_15450 PF02903 Alpha amylase, N-terminal ig-like domain JCM10941_15450 PF16657 Maltogenic Amylase, C-terminal domain JCM10941_15460 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JCM10941_15470 PF08486 Stage II sporulation protein JCM10941_15480 PF10079 Bacillithiol biosynthesis BshC JCM10941_15490 PF00027 Cyclic nucleotide-binding domain JCM10941_15490 PF13545 Crp-like helix-turn-helix domain JCM10941_15500 PF02621 Menaquinone biosynthesis JCM10941_15520 PF01916 Deoxyhypusine synthase JCM10941_15560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JCM10941_15580 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JCM10941_15580 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JCM10941_15590 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JCM10941_15590 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JCM10941_15600 PF00171 Aldehyde dehydrogenase family JCM10941_15610 PF01619 Proline dehydrogenase JCM10941_15620 PF07729 FCD domain JCM10941_15620 PF00392 Bacterial regulatory proteins, gntR family JCM10941_15640 PF00155 Aminotransferase class I and II JCM10941_15650 PF07669 Eco57I restriction-modification methylase JCM10941_15650 PF12950 TaqI-like C-terminal specificity domain JCM10941_15660 PF09573 TaqI restriction endonuclease JCM10941_15680 PF00204 DNA gyrase B JCM10941_15680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM10941_15680 PF01751 Toprim domain JCM10941_15680 PF00986 DNA gyrase B subunit, carboxyl terminus JCM10941_15690 PF07478 D-ala D-ala ligase C-terminus JCM10941_15690 PF01820 D-ala D-ala ligase N-terminus JCM10941_15700 PF01195 Peptidyl-tRNA hydrolase JCM10941_15710 PF01386 Ribosomal L25p family JCM10941_15710 PF14693 Ribosomal protein TL5, C-terminal domain JCM10941_15740 PF00989 PAS fold JCM10941_15740 PF00512 His Kinase A (phospho-acceptor) domain JCM10941_15740 PF11808 Phosphate regulon sensor protein PhoR JCM10941_15740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM10941_15750 PF00072 Response regulator receiver domain JCM10941_15750 PF00486 Transcriptional regulatory protein, C terminal JCM10941_15760 PF03793 PASTA domain JCM10941_15760 PF00069 Protein kinase domain JCM10941_15790 PF07690 Major Facilitator Superfamily JCM10941_15800 PF00490 Delta-aminolevulinic acid dehydratase JCM10941_15810 PF02575 YbaB/EbfC DNA-binding family JCM10941_15820 PF02132 RecR protein JCM10941_15820 PF13662 Toprim domain JCM10941_15870 PF07676 WD40-like Beta Propeller Repeat JCM10941_15870 PF00326 Prolyl oligopeptidase family JCM10941_15880 PF01784 NIF3 (NGG1p interacting factor 3) JCM10941_15890 PF02223 Thymidylate kinase JCM10941_15930 PF01812 5-formyltetrahydrofolate cyclo-ligase family JCM10941_15940 PF13419 Haloacid dehalogenase-like hydrolase JCM10941_15960 PF00156 Phosphoribosyl transferase domain JCM10941_15990 PF01230 HIT domain JCM10941_16000 PF04055 Radical SAM superfamily JCM10941_16000 PF00919 Uncharacterized protein family UPF0004 JCM10941_16010 PF02390 Putative methyltransferase JCM10941_16020 PF00155 Aminotransferase class I and II JCM10941_16030 PF00011 Hsp20/alpha crystallin family JCM10941_16040 PF00581 Rhodanese-like domain JCM10941_16050 PF00753 Metallo-beta-lactamase superfamily JCM10941_16070 PF02566 OsmC-like protein JCM10941_16100 PF01547 Bacterial extracellular solute-binding protein JCM10941_16110 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_16120 PF00005 ABC transporter JCM10941_16120 PF08402 TOBE domain JCM10941_16130 PF01416 tRNA pseudouridine synthase JCM10941_16140 PF12911 N-terminal TM domain of oligopeptide transport permease C JCM10941_16140 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_16150 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_16160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JCM10941_16170 PF01521 Iron-sulphur cluster biosynthesis JCM10941_16180 PF01321 Creatinase/Prolidase N-terminal domain JCM10941_16180 PF00557 Metallopeptidase family M24 JCM10941_16190 PF14572 Phosphoribosyl synthetase-associated domain JCM10941_16190 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JCM10941_16220 PF17944 Arginine decarboxylase C-terminal helical extension JCM10941_16220 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JCM10941_16220 PF17810 Arginine decarboxylase helical bundle domain JCM10941_16230 PF00990 Diguanylate cyclase, GGDEF domain JCM10941_16230 PF08448 PAS fold JCM10941_16240 PF02773 S-adenosylmethionine synthetase, C-terminal domain JCM10941_16240 PF02772 S-adenosylmethionine synthetase, central domain JCM10941_16240 PF00438 S-adenosylmethionine synthetase, N-terminal domain JCM10941_16250 PF01177 Asp/Glu/Hydantoin racemase JCM10941_16260 PF03641 Possible lysine decarboxylase JCM10941_16270 PF01713 Smr domain JCM10941_16270 PF00488 MutS domain V JCM10941_16290 PF02903 Alpha amylase, N-terminal ig-like domain JCM10941_16290 PF00128 Alpha amylase, catalytic domain JCM10941_16320 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_16330 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_16330 PF14785 Maltose transport system permease protein MalF P2 domain JCM10941_16360 PF01725 Ham1 family JCM10941_16370 PF00348 Polyprenyl synthetase JCM10941_16390 PF02629 CoA binding domain JCM10941_16390 PF06971 Putative DNA-binding protein N-terminus JCM10941_16450 PF01196 Ribosomal protein L17 JCM10941_16460 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JCM10941_16460 PF01000 RNA polymerase Rpb3/RpoA insert domain JCM10941_16460 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JCM10941_16470 PF00163 Ribosomal protein S4/S9 N-terminal domain JCM10941_16470 PF01479 S4 domain JCM10941_16480 PF00411 Ribosomal protein S11 JCM10941_16490 PF00416 Ribosomal protein S13/S18 JCM10941_16500 PF01176 Translation initiation factor 1A / IF-1 JCM10941_16510 PF00557 Metallopeptidase family M24 JCM10941_16530 PF00344 SecY translocase JCM10941_16540 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JCM10941_16550 PF00327 Ribosomal protein L30p/L7e JCM10941_16560 PF03719 Ribosomal protein S5, C-terminal domain JCM10941_16560 PF00333 Ribosomal protein S5, N-terminal domain JCM10941_16570 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JCM10941_16580 PF00347 Ribosomal protein L6 JCM10941_16590 PF00410 Ribosomal protein S8 JCM10941_16600 PF00253 Ribosomal protein S14p/S29e JCM10941_16610 PF00281 Ribosomal protein L5 JCM10941_16610 PF00673 ribosomal L5P family C-terminus JCM10941_16620 PF00467 KOW motif JCM10941_16620 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JCM10941_16630 PF00238 Ribosomal protein L14p/L23e JCM10941_16640 PF00366 Ribosomal protein S17 JCM10941_16650 PF00831 Ribosomal L29 protein JCM10941_16660 PF00252 Ribosomal protein L16p/L10e JCM10941_16670 PF07650 KH domain JCM10941_16670 PF00189 Ribosomal protein S3, C-terminal domain JCM10941_16680 PF00237 Ribosomal protein L22p/L17e JCM10941_16690 PF00203 Ribosomal protein S19 JCM10941_16700 PF00181 Ribosomal Proteins L2, RNA binding domain JCM10941_16700 PF03947 Ribosomal Proteins L2, C-terminal domain JCM10941_16710 PF00276 Ribosomal protein L23 JCM10941_16720 PF00573 Ribosomal protein L4/L1 family JCM10941_16730 PF00297 Ribosomal protein L3 JCM10941_16740 PF00338 Ribosomal protein S10p/S20e JCM10941_16750 PF03143 Elongation factor Tu C-terminal domain JCM10941_16750 PF00009 Elongation factor Tu GTP binding domain JCM10941_16750 PF03144 Elongation factor Tu domain 2 JCM10941_16760 PF14492 Elongation Factor G, domain II JCM10941_16760 PF00679 Elongation factor G C-terminus JCM10941_16760 PF00009 Elongation factor Tu GTP binding domain JCM10941_16760 PF03144 Elongation factor Tu domain 2 JCM10941_16760 PF03764 Elongation factor G, domain IV JCM10941_16770 PF00177 Ribosomal protein S7p/S5e JCM10941_16780 PF00164 Ribosomal protein S12/S23 JCM10941_16790 PF07687 Peptidase dimerisation domain JCM10941_16790 PF01546 Peptidase family M20/M25/M40 JCM10941_16800 PF03129 Anticodon binding domain JCM10941_16800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCM10941_16800 PF04073 Aminoacyl-tRNA editing domain JCM10941_16840 PF01235 Sodium:alanine symporter family JCM10941_16880 PF17746 SfsA N-terminal OB domain JCM10941_16880 PF03749 Sugar fermentation stimulation protein RE domain JCM10941_16910 PF04055 Radical SAM superfamily JCM10941_16940 PF01894 Uncharacterised protein family UPF0047 JCM10941_16950 PF06778 Chlorite dismutase JCM10941_16960 PF00924 Mechanosensitive ion channel JCM10941_16980 PF02824 TGS domain JCM10941_16980 PF13291 ACT domain JCM10941_16980 PF04607 Region found in RelA / SpoT proteins JCM10941_16990 PF00403 Heavy-metal-associated domain JCM10941_17000 PF02583 Metal-sensitive transcriptional repressor JCM10941_17010 PF00403 Heavy-metal-associated domain JCM10941_17030 PF00072 Response regulator receiver domain JCM10941_17030 PF00486 Transcriptional regulatory protein, C terminal JCM10941_17040 PF00672 HAMP domain JCM10941_17040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JCM10941_17040 PF00512 His Kinase A (phospho-acceptor) domain JCM10941_17090 PF08534 Redoxin JCM10941_17100 PF01209 ubiE/COQ5 methyltransferase family JCM10941_17160 PF00266 Aminotransferase class-V JCM10941_17170 PF01592 NifU-like N terminal domain JCM10941_17190 PF00364 Biotin-requiring enzyme JCM10941_17190 PF00561 alpha/beta hydrolase fold JCM10941_17210 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JCM10941_17210 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JCM10941_17230 PF00156 Phosphoribosyl transferase domain JCM10941_17240 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JCM10941_17260 PF02585 GlcNAc-PI de-N-acetylase JCM10941_17280 PF02504 Fatty acid synthesis protein JCM10941_17290 PF00085 Thioredoxin JCM10941_17300 PF00013 KH domain JCM10941_17300 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JCM10941_17300 PF03725 3' exoribonuclease family, domain 2 JCM10941_17300 PF00575 S1 RNA binding domain JCM10941_17300 PF01138 3' exoribonuclease family, domain 1 JCM10941_17310 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JCM10941_17320 PF00483 Nucleotidyl transferase JCM10941_17320 PF01050 Mannose-6-phosphate isomerase JCM10941_17330 PF00534 Glycosyl transferases group 1 JCM10941_17370 PF00202 Aminotransferase class-III JCM10941_17390 PF01546 Peptidase family M20/M25/M40 JCM10941_17400 PF00990 Diguanylate cyclase, GGDEF domain JCM10941_17400 PF17158 Membrane-associated sensor, integral membrane domain JCM10941_17460 PF00037 4Fe-4S binding domain JCM10941_17460 PF13247 4Fe-4S dicluster domain JCM10941_17490 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JCM10941_17500 PF01039 Carboxyl transferase domain JCM10941_17500 PF17848 Acetyl-coA carboxylase zinc finger domain JCM10941_17520 PF01551 Peptidase family M23 JCM10941_17520 PF08460 Bacterial SH3 domain JCM10941_17530 PF02885 Glycosyl transferase family, helical bundle domain JCM10941_17530 PF00591 Glycosyl transferase family, a/b domain JCM10941_17530 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JCM10941_17550 PF01116 Fructose-bisphosphate aldolase class-II JCM10941_17560 PF00437 Type II/IV secretion system protein JCM10941_17570 PF02569 Pantoate-beta-alanine ligase JCM10941_17620 PF01467 Cytidylyltransferase-like JCM10941_17630 PF09269 Domain of unknown function (DUF1967) JCM10941_17630 PF01018 GTP1/OBG JCM10941_17630 PF01926 50S ribosome-binding GTPase JCM10941_17640 PF01016 Ribosomal L27 protein JCM10941_17650 PF00829 Ribosomal prokaryotic L21 protein JCM10941_17670 PF01139 tRNA-splicing ligase RtcB JCM10941_17710 PF01967 MoaC family JCM10941_17730 PF02542 YgbB family JCM10941_17760 PF03819 MazG nucleotide pyrophosphohydrolase domain JCM10941_17770 PF02142 MGS-like domain JCM10941_17790 PF02568 Thiamine biosynthesis protein (ThiI) JCM10941_17790 PF02926 THUMP domain JCM10941_17800 PF01425 Amidase JCM10941_17810 PF03600 Citrate transporter JCM10941_17860 PF01329 Pterin 4 alpha carbinolamine dehydratase JCM10941_17870 PF03061 Thioesterase superfamily JCM10941_17890 PF06827 Zinc finger found in FPG and IleRS JCM10941_17890 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JCM10941_17890 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JCM10941_17900 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_17920 PF00561 alpha/beta hydrolase fold JCM10941_17940 PF00596 Class II Aldolase and Adducin N-terminal domain JCM10941_17950 PF04983 RNA polymerase Rpb1, domain 3 JCM10941_17950 PF04997 RNA polymerase Rpb1, domain 1 JCM10941_17950 PF04998 RNA polymerase Rpb1, domain 5 JCM10941_17950 PF00623 RNA polymerase Rpb1, domain 2 JCM10941_17950 PF05000 RNA polymerase Rpb1, domain 4 JCM10941_17960 PF04563 RNA polymerase beta subunit JCM10941_17960 PF04561 RNA polymerase Rpb2, domain 2 JCM10941_17960 PF04565 RNA polymerase Rpb2, domain 3 JCM10941_17960 PF10385 RNA polymerase beta subunit external 1 domain JCM10941_17960 PF00562 RNA polymerase Rpb2, domain 6 JCM10941_17960 PF04560 RNA polymerase Rpb2, domain 7 JCM10941_17980 PF07977 FabA-like domain JCM10941_18000 PF12072 Domain of unknown function (DUF3552) JCM10941_18000 PF00013 KH domain JCM10941_18000 PF01966 HD domain JCM10941_18010 PF00154 recA bacterial DNA recombination protein JCM10941_18020 PF02834 LigT like Phosphoesterase JCM10941_18030 PF02464 Competence-damaged protein JCM10941_18030 PF18146 Damage-inducible protein CinA KH domain JCM10941_18030 PF00994 Probable molybdopterin binding domain JCM10941_18060 PF13419 Haloacid dehalogenase-like hydrolase JCM10941_18070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JCM10941_18070 PF13378 Enolase C-terminal domain-like JCM10941_18100 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_18120 PF03652 Holliday junction resolvase JCM10941_18140 PF02272 DHHA1 domain JCM10941_18140 PF01411 tRNA synthetases class II (A) JCM10941_18140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCM10941_18160 PF00005 ABC transporter JCM10941_18160 PF02687 FtsX-like permease family JCM10941_18160 PF12704 MacB-like periplasmic core domain JCM10941_18170 PF00005 ABC transporter JCM10941_18180 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM10941_18180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JCM10941_18190 PF00463 Isocitrate lyase family JCM10941_18210 PF00005 ABC transporter JCM10941_18220 PF01458 Uncharacterized protein family (UPF0051) JCM10941_18230 PF01458 Uncharacterized protein family (UPF0051) JCM10941_18240 PF00355 Rieske [2Fe-2S] domain JCM10941_18250 PF02885 Glycosyl transferase family, helical bundle domain JCM10941_18250 PF00591 Glycosyl transferase family, a/b domain JCM10941_18260 PF00117 Glutamine amidotransferase class-I JCM10941_18270 PF00425 chorismate binding enzyme JCM10941_18270 PF04715 Anthranilate synthase component I, N terminal region JCM10941_18350 PF01451 Low molecular weight phosphotyrosine protein phosphatase JCM10941_18360 PF01209 ubiE/COQ5 methyltransferase family JCM10941_18370 PF02653 Branched-chain amino acid transport system / permease component JCM10941_18380 PF02653 Branched-chain amino acid transport system / permease component JCM10941_18410 PF04468 PSP1 C-terminal conserved region JCM10941_18420 PF09115 DNA polymerase III, delta subunit, C terminal JCM10941_18460 PF00395 S-layer homology domain JCM10941_18470 PF00082 Subtilase family JCM10941_18490 PF00872 Transposase, Mutator family JCM10941_18500 PF01483 Proprotein convertase P-domain JCM10941_18500 PF00082 Subtilase family JCM10941_18560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JCM10941_18560 PF02824 TGS domain JCM10941_18560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JCM10941_18560 PF03129 Anticodon binding domain JCM10941_18590 PF01227 GTP cyclohydrolase I JCM10941_18600 PF00132 Bacterial transferase hexapeptide (six repeats) JCM10941_18610 PF00293 NUDIX domain JCM10941_18630 PF00679 Elongation factor G C-terminus JCM10941_18630 PF00009 Elongation factor Tu GTP binding domain JCM10941_18630 PF03144 Elongation factor Tu domain 2 JCM10941_18650 PF00004 ATPase family associated with various cellular activities (AAA) JCM10941_18650 PF16193 AAA C-terminal domain JCM10941_18650 PF12002 MgsA AAA+ ATPase C terminal JCM10941_18670 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_18680 PF02515 CoA-transferase family III JCM10941_18690 PF00005 ABC transporter JCM10941_18720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JCM10941_18720 PF00364 Biotin-requiring enzyme JCM10941_18720 PF02817 e3 binding domain JCM10941_18730 PF17757 UvrB interaction domain JCM10941_18730 PF04851 Type III restriction enzyme, res subunit JCM10941_18730 PF00271 Helicase conserved C-terminal domain JCM10941_18730 PF02151 UvrB/uvrC motif JCM10941_18730 PF12344 Ultra-violet resistance protein B JCM10941_18740 PF00395 S-layer homology domain JCM10941_18770 PF01380 SIS domain JCM10941_18780 PF01134 Glucose inhibited division protein A JCM10941_18780 PF13932 GidA associated domain JCM10941_18790 PF00633 Helix-hairpin-helix motif JCM10941_18790 PF00730 HhH-GPD superfamily base excision DNA repair protein JCM10941_18790 PF14815 NUDIX domain JCM10941_18810 PF02540 NAD synthase JCM10941_18820 PF02540 NAD synthase JCM10941_18820 PF00795 Carbon-nitrogen hydrolase JCM10941_18830 PF03065 Glycosyl hydrolase family 57 JCM10941_18830 PF09210 Domain of unknown function (DUF1957) JCM10941_18840 PF00696 Amino acid kinase family JCM10941_18850 PF02774 Semialdehyde dehydrogenase, dimerisation domain JCM10941_18850 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCM10941_18880 PF08443 RimK-like ATP-grasp domain JCM10941_18890 PF08271 TFIIB zinc-binding JCM10941_18910 PF00694 Aconitase C-terminal domain JCM10941_18920 PF00330 Aconitase family (aconitate hydratase) JCM10941_18950 PF00682 HMGL-like JCM10941_18960 PF01255 Putative undecaprenyl diphosphate synthase JCM10941_18970 PF02770 Acyl-CoA dehydrogenase, middle domain JCM10941_18970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCM10941_18970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCM10941_18980 PF02441 Flavoprotein JCM10941_19010 PF07992 Pyridine nucleotide-disulphide oxidoreductase JCM10941_19050 PF00005 ABC transporter JCM10941_19070 PF01923 Cobalamin adenosyltransferase JCM10941_19100 PF00696 Amino acid kinase family JCM10941_19100 PF01472 PUA domain JCM10941_19110 PF00171 Aldehyde dehydrogenase family JCM10941_19130 PF13631 Cytochrome b(N-terminal)/b6/petB JCM10941_19140 PF00355 Rieske [2Fe-2S] domain JCM10941_19160 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JCM10941_19160 PF00034 Cytochrome c JCM10941_19160 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JCM10941_19190 PF13416 Bacterial extracellular solute-binding protein JCM10941_19200 PF04055 Radical SAM superfamily JCM10941_19210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCM10941_19210 PF02770 Acyl-CoA dehydrogenase, middle domain JCM10941_19210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCM10941_19220 PF13344 Haloacid dehalogenase-like hydrolase JCM10941_19220 PF00293 NUDIX domain JCM10941_19230 PF03462 PCRF domain JCM10941_19230 PF00472 RF-1 domain JCM10941_19240 PF02535 ZIP Zinc transporter JCM10941_19250 PF02630 SCO1/SenC JCM10941_19270 PF01906 Putative heavy-metal-binding JCM10941_19290 PF03819 MazG nucleotide pyrophosphohydrolase domain JCM10941_19300 PF00293 NUDIX domain JCM10941_19340 PF00696 Amino acid kinase family JCM10941_19360 PF12169 DNA polymerase III subunits gamma and tau domain III JCM10941_19370 PF02583 Metal-sensitive transcriptional repressor JCM10941_19390 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JCM10941_19390 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JCM10941_19390 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JCM10941_19400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JCM10941_19410 PF01266 FAD dependent oxidoreductase JCM10941_19420 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JCM10941_19420 PF01409 tRNA synthetases class II core domain (F) JCM10941_19430 PF03483 B3/4 domain JCM10941_19430 PF03484 tRNA synthetase B5 domain JCM10941_19430 PF03147 Ferredoxin-fold anticodon binding domain JCM10941_19430 PF01588 Putative tRNA binding domain JCM10941_19430 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JCM10941_19450 PF00365 Phosphofructokinase JCM10941_19460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCM10941_19480 PF00719 Inorganic pyrophosphatase JCM10941_19510 PF13567 Domain of unknown function (DUF4131) JCM10941_19510 PF00753 Metallo-beta-lactamase superfamily JCM10941_19510 PF03772 Competence protein JCM10941_19520 PF02195 ParB-like nuclease domain JCM10941_19520 PF17762 HTH domain found in ParB protein JCM10941_19530 PF13614 AAA domain JCM10941_19540 PF02527 rRNA small subunit methyltransferase G JCM10941_19570 PF09701 CRISPR-associated protein (Cas_Cmr5) JCM10941_19640 PF00270 DEAD/DEAH box helicase JCM10941_19640 PF01131 DNA topoisomerase JCM10941_19640 PF01751 Toprim domain JCM10941_19640 PF17915 Reverse gyrase zinc finger JCM10941_19650 PF00072 Response regulator receiver domain JCM10941_19650 PF08279 HTH domain JCM10941_19670 PF00005 ABC transporter JCM10941_19670 PF08402 TOBE domain JCM10941_19680 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_19780 PF01555 DNA methylase JCM10941_19800 PF18395 Cas3 C-terminal domain JCM10941_19800 PF18019 HD domain JCM10941_19810 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) JCM10941_19820 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) JCM10941_19830 PF09344 CT1975-like protein JCM10941_19850 PF08798 CRISPR associated protein JCM10941_19860 PF01867 CRISPR associated protein Cas1 JCM10941_19870 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) JCM10941_19880 PF03746 LamB/YcsF family JCM10941_19890 PF02634 FdhD/NarQ family JCM10941_19900 PF00384 Molybdopterin oxidoreductase JCM10941_19930 PF00872 Transposase, Mutator family JCM10941_20000 PF03061 Thioesterase superfamily JCM10941_20020 PF08343 Ribonucleotide reductase N-terminal JCM10941_20020 PF02867 Ribonucleotide reductase, barrel domain JCM10941_20020 PF00317 Ribonucleotide reductase, all-alpha domain JCM10941_20050 PF10099 Anti-sigma-K factor rskA JCM10941_20090 PF01497 Periplasmic binding protein JCM10941_20110 PF00005 ABC transporter JCM10941_20120 PF01032 FecCD transport family JCM10941_20130 PF01497 Periplasmic binding protein JCM10941_20150 PF03992 Antibiotic biosynthesis monooxygenase JCM10941_20160 PF09827 CRISPR associated protein Cas2 JCM10941_20170 PF01867 CRISPR associated protein Cas1 JCM10941_20250 PF00872 Transposase, Mutator family JCM10941_20310 PF00561 alpha/beta hydrolase fold JCM10941_20330 PF01557 Fumarylacetoacetate (FAA) hydrolase family JCM10941_20340 PF00171 Aldehyde dehydrogenase family JCM10941_20350 PF01557 Fumarylacetoacetate (FAA) hydrolase family JCM10941_20360 PF01361 Tautomerase enzyme JCM10941_20390 PF01613 Flavin reductase like domain JCM10941_20400 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JCM10941_20400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JCM10941_20410 PF07836 DmpG-like communication domain JCM10941_20410 PF00682 HMGL-like JCM10941_20420 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation JCM10941_20420 PF01118 Semialdehyde dehydrogenase, NAD binding domain JCM10941_20430 PF09339 IclR helix-turn-helix domain JCM10941_20430 PF01614 Bacterial transcriptional regulator JCM10941_20440 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JCM10941_20440 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JCM10941_20450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JCM10941_20600 PF00300 Histidine phosphatase superfamily (branch 1) JCM10941_20630 PF02770 Acyl-CoA dehydrogenase, middle domain JCM10941_20630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCM10941_20630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCM10941_20650 PF13193 AMP-binding enzyme C-terminal domain JCM10941_20650 PF00501 AMP-binding enzyme JCM10941_20670 PF00171 Aldehyde dehydrogenase family JCM10941_20670 PF01575 MaoC like domain JCM10941_20700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JCM10941_20700 PF02770 Acyl-CoA dehydrogenase, middle domain JCM10941_20700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JCM10941_20710 PF00440 Bacterial regulatory proteins, tetR family JCM10941_20710 PF17932 Tetracyclin repressor-like, C-terminal domain JCM10941_20720 PF13635 Domain of unknown function (DUF4143) JCM10941_20720 PF13173 AAA domain JCM10941_20770 PF04794 YdjC-like protein JCM10941_20810 PF01055 Glycosyl hydrolases family 31 JCM10941_20810 PF17137 Domain of unknown function (DUF5110) JCM10941_20810 PF16338 Domain of unknown function (DUF4968) JCM10941_20810 PF13802 Galactose mutarotase-like JCM10941_20820 PF16353 Domain of unknown function(DUF4981) JCM10941_20820 PF02929 Beta galactosidase small chain JCM10941_20820 PF02837 Glycosyl hydrolases family 2, sugar binding domain JCM10941_20820 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JCM10941_20910 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JCM10941_20910 PF07685 CobB/CobQ-like glutamine amidotransferase domain JCM10941_20920 PF12557 Cob(I)alamin adenosyltransferase N terminal JCM10941_20920 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JCM10941_20940 PF02654 Cobalamin-5-phosphate synthase JCM10941_20960 PF02277 Phosphoribosyltransferase JCM10941_20970 PF00300 Histidine phosphatase superfamily (branch 1) JCM10941_20980 PF03824 High-affinity nickel-transport protein JCM10941_20990 PF01888 CbiD JCM10941_21000 PF02570 Precorrin-8X methylmutase JCM10941_21010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCM10941_21020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCM10941_21030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCM10941_21040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JCM10941_21040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCM10941_21050 PF01890 Cobalamin synthesis G C-terminus JCM10941_21050 PF11761 Cobalamin biosynthesis central region JCM10941_21050 PF11760 Cobalamin synthesis G N-terminal JCM10941_21060 PF01903 CbiX JCM10941_21080 PF10414 Sirohaem synthase dimerisation region JCM10941_21080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JCM10941_21080 PF14824 Sirohaem biosynthesis protein central JCM10941_21090 PF00881 Nitroreductase family JCM10941_21100 PF03186 CobD/Cbib protein JCM10941_21130 PF00155 Aminotransferase class I and II JCM10941_21140 PF07685 CobB/CobQ-like glutamine amidotransferase domain JCM10941_21150 PF00245 Alkaline phosphatase JCM10941_21180 PF01975 Survival protein SurE JCM10941_21200 PF01081 KDPG and KHG aldolase JCM10941_21210 PF09339 IclR helix-turn-helix domain JCM10941_21210 PF01614 Bacterial transcriptional regulator JCM10941_21220 PF03480 Bacterial extracellular solute-binding protein, family 7 JCM10941_21240 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JCM10941_21270 PF00294 pfkB family carbohydrate kinase JCM10941_21290 PF00356 Bacterial regulatory proteins, lacI family JCM10941_21310 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_21320 PF00872 Transposase, Mutator family JCM10941_21330 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_21340 PF00528 Binding-protein-dependent transport system inner membrane component JCM10941_21350 PF00232 Glycosyl hydrolase family 1 JCM10941_21360 PF12706 Beta-lactamase superfamily domain JCM10941_21380 PF13847 Methyltransferase domain JCM10941_21380 PF03551 Transcriptional regulator PadR-like family JCM10941_21400 PF01593 Flavin containing amine oxidoreductase JCM10941_21410 PF13460 NAD(P)H-binding JCM10941_21410 PF11066 Protein of unknown function (DUF2867) JCM10941_21420 PF00106 short chain dehydrogenase JCM10941_21460 PF05368 NmrA-like family JCM10941_21470 PF13545 Crp-like helix-turn-helix domain JCM10941_21470 PF00027 Cyclic nucleotide-binding domain JCM10941_21480 PF13411 MerR HTH family regulatory protein JCM10941_21480 PF02607 B12 binding domain JCM10941_21500 PF00875 DNA photolyase JCM10941_21500 PF03441 FAD binding domain of DNA photolyase JCM10941_21510 PF00067 Cytochrome P450 JCM10941_21570 PF01593 Flavin containing amine oxidoreductase JCM10941_21580 PF01070 FMN-dependent dehydrogenase JCM10941_21620 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JCM10941_21620 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JCM10941_21680 PF07963 Prokaryotic N-terminal methylation motif JCM10941_21710 PF00239 Resolvase, N terminal domain JCM10941_21730 PF02195 ParB-like nuclease domain JCM10941_21750 PF02195 ParB-like nuclease domain JCM10941_21760 PF13614 AAA domain JCM10941_21780 PF00384 Molybdopterin oxidoreductase JCM10941_21780 PF18465 Rieske 3Fe-4S JCM10941_21780 PF01568 Molydopterin dinucleotide binding domain JCM10941_21790 PF00355 Rieske [2Fe-2S] domain JCM10941_21800 PF00872 Transposase, Mutator family JCM10941_21840 PF01625 Peptide methionine sulfoxide reductase JCM10941_21850 PF04343 Protein of unknown function, DUF488 JCM10941_21890 PF00037 4Fe-4S binding domain JCM10941_21910 PF01883 Iron-sulfur cluster assembly protein JCM10941_21930 PF07690 Major Facilitator Superfamily JCM10941_21950 PF03009 Glycerophosphoryl diester phosphodiesterase family JCM10941_21960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JCM10941_21960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JCM10941_21970 PF01266 FAD dependent oxidoreductase JCM10941_21970 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JCM10941_21990 PF01867 CRISPR associated protein Cas1 JCM10941_22000 PF01548 Transposase JCM10941_22000 PF02371 Transposase IS116/IS110/IS902 family JCM10941_22010 PF09827 CRISPR associated protein Cas2 JCM10941_22020 PF01966 HD domain JCM10941_22020 PF18211 Csm1 subunit domain B JCM10941_22040 PF03787 RAMP superfamily JCM10941_22090 PF02371 Transposase IS116/IS110/IS902 family JCM10941_22090 PF01548 Transposase JCM10941_t00350 PF05697 Bacterial trigger factor protein (TF) JCM10941_t00350 PF05698 Bacterial trigger factor protein (TF) C-terminus