TTMY_0008 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TTMY_0028 SM00563 Phosphate acyltransferases TTMY_0034 SM00422 helix_turn_helix, mercury resistance TTMY_0035 SM00419 helix_turn_helix, cAMP Regulatory protein TTMY_0039 SM00849 Metallo-beta-lactamase superfamily TTMY_0040 SM00354 helix_turn _helix lactose operon repressor TTMY_0041 SM00822 TTMY_0041 TTMY_0057 SM00950 TTMY_0057 TTMY_0130 SM00345 helix_turn_helix gluconate operon transcriptional repressor TTMY_0130 SM00895 TTMY_0130 TTMY_0140 SM00346 helix_turn_helix isocitrate lyase regulation TTMY_0141 SM00859 Semialdehyde dehydrogenase, NAD binding domain TTMY_0144 SM00903 Flavin reductase like domain TTMY_0170 SM00382 ATPases associated with a variety of cellular activities TTMY_0179 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TTMY_0179 SM00481 DNA polymerase alpha chain like domain TTMY_0179 SM00483 DNA polymerase X family TTMY_0180 SM00986 Uracil DNA glycosylase superfamily TTMY_0180 SM00987 UreE urease accessory protein, C-terminal domain TTMY_0184 SM00893 Electron transfer flavoprotein domain TTMY_0185 SM00893 Electron transfer flavoprotein domain TTMY_0187 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TTMY_0187 SM00091 PAS domain TTMY_0187 SM00387 Histidine kinase-like ATPases TTMY_0187 SM00388 His Kinase A (phosphoacceptor) domain TTMY_0188 SM00448 cheY-homologous receiver domain TTMY_0189 SM00831 Cation transporter/ATPase, N-terminus TTMY_0190 SM00116 Domain in cystathionine beta-synthase and other proteins. TTMY_0193 SM00316 Ribosomal protein S1-like RNA-binding domain TTMY_0193 SM00322 K homology RNA-binding domain TTMY_0194 SM01387 TTMY_0194 TTMY_0200 SM00960 Roadblock/LC7 domain TTMY_0206 SM00841 Elongation factor P, C-terminal TTMY_0206 SM01185 TTMY_0206 TTMY_0208 SM00878 Biotin carboxylase C-terminal domain TTMY_0208 SM01209 TTMY_0208 TTMY_0220 SM00464 Found in ATP-dependent protease La (LON) TTMY_0221 SM00382 ATPases associated with a variety of cellular activities TTMY_0235 SM00382 ATPases associated with a variety of cellular activities TTMY_0237 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TTMY_0237 SM00292 breast cancer carboxy-terminal domain TTMY_0237 SM00532 Ligase N family TTMY_0244 SM00864 Tubulin/FtsZ family, GTPase domain TTMY_0244 SM00865 Tubulin/FtsZ family, C-terminal domain TTMY_0245 SM00842 Cell division protein FtsA TTMY_0270 SM00382 ATPases associated with a variety of cellular activities TTMY_0270 SM00959 Rho termination factor, N-terminal domain TTMY_0276 SM00327 von Willebrand factor (vWF) type A domain TTMY_0277 SM00116 Domain in cystathionine beta-synthase and other proteins. TTMY_0277 SM00924 MgtE intracellular N domain TTMY_0282 SM00482 DNA polymerase A domain TTMY_0283 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TTMY_0283 SM00475 5'-3' exonuclease TTMY_0306 SM00382 ATPases associated with a variety of cellular activities TTMY_0306 SM00962 SRP54-type protein, GTPase domain TTMY_0306 SM00963 SRP54-type protein, helical bundle domain TTMY_0311 SM00421 helix_turn_helix, Lux Regulon TTMY_0311 SM00448 cheY-homologous receiver domain TTMY_0313 SM00450 Rhodanese Homology Domain TTMY_0320 SM00474 3'-5' exonuclease TTMY_0320 SM00482 DNA polymerase A domain TTMY_0330 SM00382 ATPases associated with a variety of cellular activities TTMY_0334 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TTMY_0334 SM00387 Histidine kinase-like ATPases TTMY_0334 SM00388 His Kinase A (phosphoacceptor) domain TTMY_0335 SM00448 cheY-homologous receiver domain TTMY_0335 SM00862 Transcriptional regulatory protein, C terminal TTMY_0349 SM00091 PAS domain TTMY_0354 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TTMY_0354 SM00267 diguanylate cyclase TTMY_0356 SM00347 helix_turn_helix multiple antibiotic resistance protein TTMY_0358 SM00796 Allophanate hydrolase subunit 1 TTMY_0358 SM00797 Allophanate hydrolase subunit 2 TTMY_0359 SM00797 Allophanate hydrolase subunit 2 TTMY_0368 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TTMY_0384 SM00382 ATPases associated with a variety of cellular activities TTMY_0385 SM00382 ATPases associated with a variety of cellular activities TTMY_0389 SM00903 Flavin reductase like domain TTMY_0395 SM01130 TTMY_0395 TTMY_0411 SM00382 ATPases associated with a variety of cellular activities TTMY_0414 SM00861 Transketolase, pyrimidine binding domain TTMY_0421 SM00798 AICARFT/IMPCHase bienzyme TTMY_0426 SM01207 TTMY_0426 TTMY_0428 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TTMY_0431 SM00316 Ribosomal protein S1-like RNA-binding domain TTMY_0431 SM00955 TTMY_0431 TTMY_0437 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TTMY_0443 SM00909 Sporulation and spore germination TTMY_0444 SM00968 SMC proteins Flexible Hinge Domain TTMY_0452 SM00840 TTMY_0452 TTMY_0458 SM00487 DEAD-like helicases superfamily TTMY_0458 SM00490 helicase superfamily c-terminal domain TTMY_0458 SM00982 TTMY_0458 TTMY_0459 SM01058 CarD-like/TRCF domain TTMY_0475 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TTMY_0493 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TTMY_0512 SM00450 Rhodanese Homology Domain TTMY_0514 SM00450 Rhodanese Homology Domain TTMY_0514 SM00849 Metallo-beta-lactamase superfamily TTMY_0515 SM00450 Rhodanese Homology Domain TTMY_0517 SM00518 AP endonuclease family 2 TTMY_0520 SM00116 Domain in cystathionine beta-synthase and other proteins. TTMY_0523 SM00116 Domain in cystathionine beta-synthase and other proteins. TTMY_0525 SM00935 Outer membrane protein (OmpH-like) TTMY_0526 SM00843 TTMY_0526 TTMY_0539 SM00387 Histidine kinase-like ATPases TTMY_0539 SM00388 His Kinase A (phosphoacceptor) domain TTMY_0540 SM00448 cheY-homologous receiver domain TTMY_0541 SM00091 PAS domain TTMY_0541 SM00479 TTMY_0541 TTMY_0542 SM01209 TTMY_0542 TTMY_0542 SM01210 TTMY_0542 TTMY_0548 SM01207 TTMY_0548 TTMY_0549 SM00354 helix_turn _helix lactose operon repressor TTMY_0553 SM00729 Elongator protein 3, MiaB family, Radical SAM TTMY_0556 SM00867 YceI-like domain TTMY_0561 SM00267 diguanylate cyclase TTMY_0583 SM00464 Found in ATP-dependent protease La (LON) TTMY_0586 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TTMY_0610 SM00529 Helix-turn-helix diphteria tox regulatory element TTMY_0610 SM00899 TTMY_0610 TTMY_0613 SM00822 TTMY_0613 TTMY_0615 SM00382 ATPases associated with a variety of cellular activities TTMY_0622 SM00838 Elongation factor G C-terminus TTMY_0623 SM00387 Histidine kinase-like ATPases TTMY_0623 SM00388 His Kinase A (phosphoacceptor) domain TTMY_0626 SM01130 TTMY_0626 TTMY_0629 SM00116 Domain in cystathionine beta-synthase and other proteins. TTMY_0629 SM01091 Transporter associated domain TTMY_0630 SM00347 helix_turn_helix multiple antibiotic resistance protein TTMY_0653 SM00382 ATPases associated with a variety of cellular activities TTMY_0666 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TTMY_0669 SM00257 Lysin motif TTMY_0672 SM00316 Ribosomal protein S1-like RNA-binding domain TTMY_0678 SM00822 TTMY_0678 TTMY_0703 SM00829 Enoylreductase TTMY_0714 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TTMY_0722 SM00984 UDP binding domain TTMY_0735 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain TTMY_0738 SM00327 von Willebrand factor (vWF) type A domain TTMY_0746 SM00382 ATPases associated with a variety of cellular activities TTMY_0746 SM01086 C-terminal, D2-small domain, of ClpB protein TTMY_0747 SM00028 Tetratricopeptide repeats TTMY_0762 SM00943 Bifunctional DNA primase/polymerase, N-terminal TTMY_0769 SM00448 cheY-homologous receiver domain TTMY_0769 SM00862 Transcriptional regulatory protein, C terminal TTMY_0773 SM00854 Bacterial capsule synthesis protein PGA_cap TTMY_0781 SM01018 B12 binding domain TTMY_0784 SM01086 C-terminal, D2-small domain, of ClpB protein TTMY_0785 SM00382 ATPases associated with a variety of cellular activities TTMY_0785 SM00994 ClpX C4-type zinc finger TTMY_0793 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TTMY_0799 SM00729 Elongator protein 3, MiaB family, Radical SAM TTMY_0799 SM00876 Biotin and Thiamin Synthesis associated domain TTMY_0830 SM00382 ATPases associated with a variety of cellular activities TTMY_0841 SM00382 ATPases associated with a variety of cellular activities TTMY_0847 SM00479 TTMY_0847 TTMY_0857 SM00829 Enoylreductase TTMY_0875 SM01207 TTMY_0875 TTMY_0886 SM00363 S4 RNA-binding domain TTMY_0887 SM00859 Semialdehyde dehydrogenase, NAD binding domain TTMY_0891 SM00382 ATPases associated with a variety of cellular activities TTMY_0891 SM01086 C-terminal, D2-small domain, of ClpB protein TTMY_0892 SM00382 ATPases associated with a variety of cellular activities TTMY_0898 SM00881 CoA binding domain TTMY_0910 SM00904 Riboflavin kinase TTMY_0919 SM00919 Malic enzyme, NAD binding domain TTMY_0920 SM01274 TTMY_0920 TTMY_0925 SM01001 AIR carboxylase TTMY_0932 SM00422 helix_turn_helix, mercury resistance TTMY_0933 SM00346 helix_turn_helix isocitrate lyase regulation TTMY_0944 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain TTMY_0945 SM00729 Elongator protein 3, MiaB family, Radical SAM TTMY_0964 SM00642 Alpha-amylase domain TTMY_0970 SM00116 Domain in cystathionine beta-synthase and other proteins. TTMY_0971 SM00382 ATPases associated with a variety of cellular activities TTMY_0972 SM00382 ATPases associated with a variety of cellular activities TTMY_0976 SM00829 Enoylreductase TTMY_0992 SM00382 ATPases associated with a variety of cellular activities TTMY_1000 SM00382 ATPases associated with a variety of cellular activities TTMY_1004 SM01234 TTMY_1004 TTMY_1006 SM00393 Putative single-stranded nucleic acids-binding domain TTMY_1009 SM00382 ATPases associated with a variety of cellular activities TTMY_1012 SM00382 ATPases associated with a variety of cellular activities TTMY_1012 SM00962 SRP54-type protein, GTPase domain TTMY_1012 SM00963 SRP54-type protein, helical bundle domain TTMY_1016 SM00116 Domain in cystathionine beta-synthase and other proteins. TTMY_1016 SM01240 TTMY_1016 TTMY_1026 SM00028 Tetratricopeptide repeats TTMY_1027 SM00903 Flavin reductase like domain TTMY_1031 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TTMY_1032 SM00822 TTMY_1032 TTMY_1034 SM00825 Beta-ketoacyl synthase TTMY_1035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TTMY_1038 SM00363 S4 RNA-binding domain TTMY_1040 SM00382 ATPases associated with a variety of cellular activities TTMY_1042 SM00028 Tetratricopeptide repeats TTMY_1044 SM00382 ATPases associated with a variety of cellular activities TTMY_1047 SM00829 Enoylreductase TTMY_1059 SM00830 Chorismate mutase type II TTMY_1067 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain TTMY_1076 SM00740 TTMY_1076 TTMY_1079 SM00448 cheY-homologous receiver domain TTMY_1079 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TTMY_1080 SM00960 Roadblock/LC7 domain TTMY_1094 SM00729 Elongator protein 3, MiaB family, Radical SAM TTMY_1106 SM00862 Transcriptional regulatory protein, C terminal TTMY_1115 SM00704 CDGSH-type zinc finger. Function unknown. TTMY_1133 SM00046 Diacylglycerol kinase catalytic domain (presumed) TTMY_1141 SM00938 Nitrogen regulatory protein P-II TTMY_1146 SM01005 Alanine racemase, C-terminal domain TTMY_1156 SM00382 ATPases associated with a variety of cellular activities TTMY_1158 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TTMY_1158 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TTMY_1158 SM00493 TTMY_1158 TTMY_1170 SM00650 Ribosomal RNA adenine dimethylases TTMY_1176 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TTMY_1177 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TTMY_1177 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TTMY_1187 SM00836 DALR anticodon binding domain TTMY_1187 SM01016 Arginyl tRNA synthetase N terminal dom TTMY_1188 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TTMY_1197 SM00448 cheY-homologous receiver domain TTMY_1198 SM00028 Tetratricopeptide repeats TTMY_1201 SM00388 His Kinase A (phosphoacceptor) domain TTMY_1207 SM00861 Transketolase, pyrimidine binding domain TTMY_1212 SM00506 Appr-1"-p processing enzyme TTMY_1216 SM00487 DEAD-like helicases superfamily TTMY_1219 SM00530 Helix-turn-helix XRE-family like proteins TTMY_1226 SM00487 DEAD-like helicases superfamily TTMY_1226 SM00490 helicase superfamily c-terminal domain TTMY_1230 SM00478 endonuclease III TTMY_1230 SM00525 TTMY_1230 TTMY_1231 SM01022 TTMY_1231 TTMY_1232 SM00382 ATPases associated with a variety of cellular activities TTMY_1236 SM00946 Prolyl-tRNA synthetase, C-terminal TTMY_1257 SM00506 Appr-1"-p processing enzyme TTMY_1266 SM00564 beta-propeller repeat TTMY_1271 SM00937 TTMY_1271 TTMY_1273 SM00387 Histidine kinase-like ATPases TTMY_1273 SM00388 His Kinase A (phosphoacceptor) domain TTMY_1274 SM00448 cheY-homologous receiver domain TTMY_1274 SM00862 Transcriptional regulatory protein, C terminal TTMY_1275 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TTMY_1276 SM00363 S4 RNA-binding domain TTMY_1279 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain TTMY_1280 SM00829 Enoylreductase TTMY_1290 SM00316 Ribosomal protein S1-like RNA-binding domain TTMY_1322 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TTMY_1322 SM00954 Region found in RelA / SpoT proteins TTMY_1327 SM00448 cheY-homologous receiver domain TTMY_1327 SM00862 Transcriptional regulatory protein, C terminal TTMY_1328 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TTMY_1328 SM00387 Histidine kinase-like ATPases TTMY_1328 SM00388 His Kinase A (phosphoacceptor) domain TTMY_1351 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family TTMY_1358 SM00316 Ribosomal protein S1-like RNA-binding domain TTMY_1393 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TTMY_1410 SM00305 Hint (Hedgehog/Intein) domain C-terminal region TTMY_1410 SM00306 Hint (Hedgehog/Intein) domain N-terminal region TTMY_1413 SM00933 TTMY_1413 TTMY_1414 SM00382 ATPases associated with a variety of cellular activities TTMY_1424 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TTMY_1427 SM00851 MGS-like domain TTMY_1429 SM00981 TTMY_1429 TTMY_1440 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain TTMY_1440 SM01232 TTMY_1440 TTMY_1445 SM01007 Class II Aldolase and Adducin N-terminal domain TTMY_1446 SM00663 RNA polymerase I subunit A N-terminus TTMY_1451 SM00322 K homology RNA-binding domain TTMY_1451 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TTMY_1452 SM00382 ATPases associated with a variety of cellular activities TTMY_1454 SM00852 Probable molybdopterin binding domain TTMY_1458 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TTMY_1463 SM00732 Likely ribonuclease with RNase H fold. TTMY_1465 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TTMY_1469 SM00382 ATPases associated with a variety of cellular activities TTMY_1486 SM00226 Low molecular weight phosphatase family TTMY_1492 SM00903 Flavin reductase like domain TTMY_1512 SM00382 ATPases associated with a variety of cellular activities TTMY_1516 SM00382 ATPases associated with a variety of cellular activities TTMY_1521 SM00487 DEAD-like helicases superfamily TTMY_1521 SM00490 helicase superfamily c-terminal domain TTMY_1526 SM00478 endonuclease III TTMY_1526 SM00525 TTMY_1526 TTMY_1527 SM00881 CoA binding domain TTMY_1534 SM00859 Semialdehyde dehydrogenase, NAD binding domain TTMY_1555 SM00382 ATPases associated with a variety of cellular activities TTMY_1562 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase TTMY_1574 SM00729 Elongator protein 3, MiaB family, Radical SAM TTMY_1577 SM00937 TTMY_1577 TTMY_1592 SM00382 ATPases associated with a variety of cellular activities TTMY_1601 SM00873 B3/4 domain TTMY_1601 SM00874 tRNA synthetase B5 domain TTMY_1601 SM00896 Ferredoxin-fold anticodon binding domain TTMY_1608 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TTMY_1609 SM00849 Metallo-beta-lactamase superfamily TTMY_1610 SM00470 ParB-like nuclease domain TTMY_1613 SM01228 TTMY_1613 TTMY_1614 SM00382 ATPases associated with a variety of cellular activities TTMY_1614 SM00760 Bacterial dnaA protein helix-turn-helix domain TTMY_1615 SM00480 DNA polymerase III beta subunit TTMY_1616 SM01192 TTMY_1616 TTMY_1616 SM01193 TTMY_1616 TTMY_1620 SM00849 Metallo-beta-lactamase superfamily TTMY_1621 SM00861 Transketolase, pyrimidine binding domain TTMY_1630 SM00855 Phosphoglycerate mutase family TTMY_1632 SM00845 GatB domain TTMY_1633 SM00382 ATPases associated with a variety of cellular activities TTMY_1638 SM00357 Cold shock protein domain TTMY_1656 SM00852 Probable molybdopterin binding domain TTMY_1666 SM00481 DNA polymerase alpha chain like domain TTMY_1704 SM00788 Adenylosuccinate synthetase TTMY_1705 SM00788 Adenylosuccinate synthetase TTMY_1713 SM00861 Transketolase, pyrimidine binding domain TTMY_1720 SM00966 SpoVT / AbrB like domain TTMY_1730 SM00729 Elongator protein 3, MiaB family, Radical SAM TTMY_1732 SM00822 TTMY_1732 TTMY_1741 SM00649 Ribosomal protein L11/L12 TTMY_1742 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TTMY_1742 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TTMY_1750 SM00849 Metallo-beta-lactamase superfamily TTMY_1750 SM01027 Beta-Casp domain TTMY_1760 SM00382 ATPases associated with a variety of cellular activities TTMY_1764 SM00257 Lysin motif TTMY_1767 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain TTMY_1772 SM00883 Chaperonin 10 Kd subunit TTMY_1773 SM00967 RNA 2'-O ribose methyltransferase substrate binding TTMY_1774 SM00881 CoA binding domain TTMY_1780 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain TTMY_1788 SM00861 Transketolase, pyrimidine binding domain TTMY_1790 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TTMY_1795 SM00967 RNA 2'-O ribose methyltransferase substrate binding TTMY_1823 SM00849 Metallo-beta-lactamase superfamily TTMY_1828 SM00363 S4 RNA-binding domain TTMY_1831 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TTMY_1831 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TTMY_1833 SM01120 TTMY_1833 TTMY_1833 SM01121 TTMY_1833 TTMY_1841 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TTMY_1841 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TTMY_1846 SM00382 ATPases associated with a variety of cellular activities TTMY_1848 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TTMY_1858 SM00905 Dihydroneopterin aldolase TTMY_1860 SM00562 TTMY_1860 TTMY_1861 SM00331 Sigma factor PP2C-like phosphatases TTMY_1861 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain TTMY_1868 SM00306 Hint (Hedgehog/Intein) domain N-terminal region TTMY_1868 SM00481 DNA polymerase alpha chain like domain TTMY_1869 SM00305 Hint (Hedgehog/Intein) domain C-terminal region TTMY_1874 SM00271 DnaJ molecular chaperone homology domain TTMY_1874 SM00357 Cold shock protein domain TTMY_1880 SM01058 CarD-like/TRCF domain TTMY_1889 SM00838 Elongation factor G C-terminus TTMY_1889 SM00889 Elongation factor G, domain IV TTMY_1891 SM01403 TTMY_1891 TTMY_1895 SM01382 TTMY_1895 TTMY_1895 SM01383 TTMY_1895 TTMY_1898 SM00322 K homology RNA-binding domain TTMY_1902 SM01374 TTMY_1902 TTMY_1903 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TTMY_1918 SM00363 S4 RNA-binding domain TTMY_1918 SM01390 TTMY_1918 TTMY_1919 SM00662 RNA polymerases D TTMY_1923 SM00028 Tetratricopeptide repeats TTMY_1925 SM00881 CoA binding domain TTMY_1941 SM00642 Alpha-amylase domain TTMY_1943 SM00382 ATPases associated with a variety of cellular activities TTMY_1943 SM00463 Small MutS-related domain TTMY_1943 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TTMY_1943 SM00534 ATPase domain of DNA mismatch repair MUTS family TTMY_1947 SM00267 diguanylate cyclase TTMY_1952 SM01400 TTMY_1952 TTMY_1959 SM00382 ATPases associated with a variety of cellular activities TTMY_1966 SM00849 Metallo-beta-lactamase superfamily TTMY_1967 SM00450 Rhodanese Homology Domain TTMY_1972 SM00729 Elongator protein 3, MiaB family, Radical SAM TTMY_1979 SM00834 Putative regulatory protein TTMY_1984 SM00960 Roadblock/LC7 domain TTMY_1985 SM00960 Roadblock/LC7 domain TTMY_1987 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TTMY_1987 SM00493 TTMY_1987 TTMY_1989 SM01004 Delta-aminolevulinic acid dehydratase TTMY_1992 SM00331 Sigma factor PP2C-like phosphatases TTMY_1992 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain TTMY_1993 SM00220 Serine/Threonine protein kinases, catalytic domain TTMY_1995 SM00448 cheY-homologous receiver domain TTMY_1995 SM00862 Transcriptional regulatory protein, C terminal TTMY_1996 SM00387 Histidine kinase-like ATPases TTMY_1996 SM00388 His Kinase A (phosphoacceptor) domain TTMY_2002 SM00387 Histidine kinase-like ATPases TTMY_2002 SM00433 TopoisomeraseII TTMY_2009 SM00345 helix_turn_helix gluconate operon transcriptional repressor TTMY_2009 SM00895 TTMY_2009 TTMY_2012 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TTMY_2013 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TTMY_2018 SM00670 Large family of predicted nucleotide-binding domains TTMY_2021 SM00028 Tetratricopeptide repeats TTMY_2023 SM00100 Cyclic nucleotide-monophosphate binding domain TTMY_2023 SM00419 helix_turn_helix, cAMP Regulatory protein TTMY_2028 SM00642 Alpha-amylase domain TTMY_2029 SM00072 Guanylate kinase homologues. TTMY_2030 SM01409 TTMY_2030 TTMY_2045 SM01400 TTMY_2045 TTMY_2046 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TTMY_2047 SM00465 GIY-YIG type nucleases (URI domain) TTMY_2058 SM01329 TTMY_2058 TTMY_2059 SM00955 TTMY_2059 TTMY_2066 SM00829 Enoylreductase TTMY_2075 SM00981 TTMY_2075 TTMY_2080 SM01211 TTMY_2080 TTMY_2085 SM00998 Adenylosuccinate lyase C-terminus TTMY_2088 SM00867 YceI-like domain TTMY_2095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TTMY_2095 SM00387 Histidine kinase-like ATPases TTMY_2095 SM00388 His Kinase A (phosphoacceptor) domain TTMY_2096 SM00448 cheY-homologous receiver domain TTMY_2096 SM00862 Transcriptional regulatory protein, C terminal TTMY_2099 SM00382 ATPases associated with a variety of cellular activities TTMY_2100 SM00838 Elongation factor G C-terminus TTMY_2100 SM00889 Elongation factor G, domain IV TTMY_2107 SM00382 ATPases associated with a variety of cellular activities TTMY_2110 SM00271 DnaJ molecular chaperone homology domain TTMY_2112 SM00382 ATPases associated with a variety of cellular activities TTMY_2112 SM01086 C-terminal, D2-small domain, of ClpB protein TTMY_2125 SM00116 Domain in cystathionine beta-synthase and other proteins. TTMY_2130 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TTMY_2135 SM00387 Histidine kinase-like ATPases TTMY_2136 SM00421 helix_turn_helix, Lux Regulon TTMY_2136 SM00448 cheY-homologous receiver domain TTMY_2150 SM00382 ATPases associated with a variety of cellular activities TTMY_2159 SM00155 Phospholipase D. Active site motifs. TTMY_2162 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TTMY_2162 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TTMY_2169 SM00382 ATPases associated with a variety of cellular activities TTMY_2173 SM00100 Cyclic nucleotide-monophosphate binding domain TTMY_2173 SM00419 helix_turn_helix, cAMP Regulatory protein TTMY_2174 SM00382 ATPases associated with a variety of cellular activities TTMY_2181 SM00849 Metallo-beta-lactamase superfamily TTMY_2186 SM00382 ATPases associated with a variety of cellular activities TTMY_2188 SM00594 TTMY_2188 TTMY_2196 SM00450 Rhodanese Homology Domain TTMY_2203 SM00382 ATPases associated with a variety of cellular activities TTMY_2211 SM00028 Tetratricopeptide repeats TTMY_2234 SM00563 Phosphate acyltransferases TTMY_2246 SM01329 TTMY_2246 TTMY_2249 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TTMY_2256 SM00646 TTMY_2256 TTMY_2258 SM00220 Serine/Threonine protein kinases, catalytic domain TTMY_2267 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TTMY_2267 SM00387 Histidine kinase-like ATPases TTMY_2267 SM00388 His Kinase A (phosphoacceptor) domain TTMY_2268 SM00448 cheY-homologous receiver domain TTMY_2268 SM00862 Transcriptional regulatory protein, C terminal TTMY_2271 SM00419 helix_turn_helix, cAMP Regulatory protein TTMY_2275 SM00434 DNA Topoisomerase IV TTMY_2276 SM00434 DNA Topoisomerase IV TTMY_2278 SM00257 Lysin motif TTMY_2282 SM00421 helix_turn_helix, Lux Regulon TTMY_2282 SM00448 cheY-homologous receiver domain TTMY_2285 SM00411 bacterial (prokaryotic) histone like domain TTMY_2286 SM00563 Phosphate acyltransferases TTMY_2292 SM00382 ATPases associated with a variety of cellular activities TTMY_2293 SM00382 ATPases associated with a variety of cellular activities TTMY_2297 SM00382 ATPases associated with a variety of cellular activities TTMY_2298 SM00382 ATPases associated with a variety of cellular activities TTMY_2303 SM01230 TTMY_2303 TTMY_2310 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TTMY_2310 SM00534 ATPase domain of DNA mismatch repair MUTS family TTMY_2311 SM00853 MutL C terminal dimerisation domain TTMY_2311 SM01340 TTMY_2311 TTMY_2314 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TTMY_2321 SM00116 Domain in cystathionine beta-synthase and other proteins. TTMY_2328 SM00729 Elongator protein 3, MiaB family, Radical SAM TTMY_2329 SM00704 CDGSH-type zinc finger. Function unknown. TTMY_2330 SM00729 Elongator protein 3, MiaB family, Radical SAM TTMY_2335 SM00382 ATPases associated with a variety of cellular activities TTMY_2344 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TTMY_2344 SM00245 tail specific protease TTMY_2345 SM00382 ATPases associated with a variety of cellular activities TTMY_2357 SM00220 Serine/Threonine protein kinases, catalytic domain TTMY_2358 SM00849 Metallo-beta-lactamase superfamily TTMY_2374 SM00487 DEAD-like helicases superfamily TTMY_2374 SM00490 helicase superfamily c-terminal domain TTMY_2383 SM00400 zinc finger TTMY_2383 SM00493 TTMY_2383 TTMY_2386 SM00487 DEAD-like helicases superfamily TTMY_2386 SM00490 helicase superfamily c-terminal domain TTMY_2392 SM00957 SecA DEAD-like domain TTMY_2392 SM00958 SecA preprotein cross-linking domain TTMY_2410 SM00382 ATPases associated with a variety of cellular activities TTMY_2417 SM00822 TTMY_2417 TTMY_2420 SM01329 TTMY_2420 TTMY_2441 SM00917 LeuA allosteric (dimerisation) domain TTMY_2442 SM00917 LeuA allosteric (dimerisation) domain TTMY_2445 SM00382 ATPases associated with a variety of cellular activities TTMY_2452 SM01207 TTMY_2452 TTMY_2457 SM00859 Semialdehyde dehydrogenase, NAD binding domain TTMY_2472 SM00155 Phospholipase D. Active site motifs. TTMY_2473 SM01133 TTMY_2473 TTMY_2479 SM00226 Low molecular weight phosphatase family TTMY_2484 SM00729 Elongator protein 3, MiaB family, Radical SAM TTMY_2488 SM00062 Bacterial periplasmic substrate-binding proteins TTMY_2488 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. TTMY_2496 SM00382 ATPases associated with a variety of cellular activities TTMY_2505 SM00966 SpoVT / AbrB like domain TTMY_2514 SM00849 Metallo-beta-lactamase superfamily TTMY_2543 SM00903 Flavin reductase like domain TTMY_2544 SM00867 YceI-like domain TTMY_2546 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain TTMY_2557 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TTMY_2557 SM00387 Histidine kinase-like ATPases TTMY_2557 SM00388 His Kinase A (phosphoacceptor) domain TTMY_2558 SM00862 Transcriptional regulatory protein, C terminal TTMY_2559 SM00448 cheY-homologous receiver domain TTMY_2578 SM00530 Helix-turn-helix XRE-family like proteins