   TTMY_0003 NONE
   TTMY_0004 NONE
   TTMY_0005    6272 ..    6285 +  -9.5  -3.28712   AGAGGGGGGGAAAGC               GCCCC GGGA GGGGC                TTCTGGGGAAGAGGC  61 260
    TTHA1802 NONE
   TTMY_2563 NONE
   TTMY_2564 NONE
   TTMY_2565 NONE
   TTMY_0009 NONE
   TTMY_2568 NONE
   TTMY_0010 NONE
   TTMY_2569 NONE
     TTHV059 NONE
   TTMY_0011 NONE
   TTMY_0012   12056 ..   12067 +  -3.6  -2.62263   GCGAGGAGACCATAG                GGGT CCTT GCCC                 TCCTATCGGAAGACT  40 145
   TTMY_2573 NONE
Ththe16_2243 NONE
   TTMY_2574 NONE
   TTMY_2575 NONE
        aidB   13882 ..   13896 +  -8.5  -3.16881   CCATGCAGAAGAAGG               GGGCC CCATA GGCCC               TTCCTCGCCTGGCTG  56 15
   TTMY_0015   14197 ..   14227 +  -5.3  -3.23042   TTGTACCTGCCCGAG      GGCGGGGCGTGAGG CCGC CCTGGC-CCCCACC       TTCCTCCTCGCTCTT  51 14
   Sthe_2392 NONE
   TTMY_0016   15835 ..   15850 +  -3.9  -2.68942   GGTAGGGGAGGAGGA              GGTGG ACTATG CCGCC               CTTCTATAAGCGCCT  41 1
   TTMY_0017 NONE
   TTMY_2580 NONE
 TtJL18_2277 NONE
   TTMY_2581 NONE
   TTMY_2582 NONE
   TTMY_0019   18680 ..   18737 +  -3.2  -4.07568   GGCGCTGATGCACGT CC-CCGGGGCCTAGAGGAACCGGGC GAAGACCCG GCCCAGGGCCTCGAGGTCCTGAAGG TTTTCCCGGAGCACC  61 13
   TTMY_0034 NONE
   TTMY_0035   30325 ..   30340 +  -4.6  -3.21099   CGGCGTCCTGGAAGC              GGCCTG AATG CGGGTC               TTCGTCGTCGGCGGA  47 19
   TTMY_0036   31384 ..   31397 +  -8.1  -3.73224   CCGGGTAATCCCGAG               GCCCT GGAA AGGGC                TTTGCTCCGCCATGC  63 214
  TNMX_06265 NONE
  TNMX_06270   31820 ..   31846 +  -3.4  -3.99374   AGGGAAAGCCTGTAG         GCCCGGCTCCCC GTG GCGGTGCCCAGC         TTCTTCTTCCTCACA  58 40
   TTMY_0039   33273 ..   33305 +  -4.6  -3.50133   TCCACCCCTTTTCGG      GGTGGGCCAAGGGC CTAAA GCCTAAGGGCCGCC      GTTTTTCTCAGGCTC  52 348
   TTMY_0048   41470 ..   41486 +  -6.5  -3.18582   GCAAGGCGGCGTAGT              GGGGGAG GTG CTCTTCC              TTGATGCCTCCCGTG  51 128
   TTMY_0050 NONE
        surE   44053 ..   44066 +  -4.5  -2.71681   GGTCGCACATCATGA               GGAGG ATGC CCTTC                TCCTTGGCCACCTTG  42 302
   TTMY_0057   50455 ..   50471 +  -4.3  -4.58663   GCCCAAGGCCAGGGG              TCCTGCC TGG GACAGGG              TTTTTGCGCCCTCCT  75 157
   TTMY_0058   51068 ..   51091 +  -3.6  -2.83403   TGCCCGCTAGGGCGA          GGCCCGGGGC GCGA GGCCCTGACC           GTTTCCTGACACGCG  43 31
   TTMY_0059   51677 ..   51687 +  -8.2  -3.61398   GAGGTCTACCTGGGG                 GCGG GGA CCGC                 TTCTTCAACCCCGCC  62 145
   TTMY_0060 NONE
   TTMY_0061   52655 ..   52696 + -19.5  -3.14132   CTAAGGGGCCGGTCG GCCGG--GGCCCGGCTCCC CTCCCT GGGGGCCGGGCCTTCCGGC TTCCTGGGGGGGGAC 100 37
TGVEG_231970   58213 ..   58229 +  -9.4  -4.11216   TTCTTCCCGCCTCGA              GGCCCT CCCCC AGGGCC              TTTTCCACCTCAAAG  74 522
   TTMY_0082 NONE
       BgSA3 NONE
   TTMY_0084   70134 ..   70155 +  -7.9  -2.80113   AGGAGGCGGGGGTGT           TCCGGGGGT GAAG GCCCCCGAA            TATAATCCCCTCATG  51 15
   TTMY_0085 NONE
   TTMY_0086   72130 ..   72145 +  -7.5  -3.53761   CCTCCTCGCCCTCTC              GCCCC TCCCCC GGGGC               TTTCCGCCGCCCTTG  60 178
   TTMY_0087 NONE
     TTHB045 NONE
   TTMY_0089 NONE
   TTMY_0090   75213 ..   75253 +  -4.5  -3.07307   CAGGTACAGGATGCT GCTCGGCACCAGCCCCGG GGTGGG CGGGGGCAGGATCC-AGC  TTAGGTAGGGCTTTC  45 293
   TTMY_0093   77407 ..   77417 +  -2.4  -2.73364   TGGCCTCCTCCTCAA                 GGCC CAG GGCG                 TACTTGGCGTAGAAG  39 374
   TTMY_0111   94607 ..   94630 +  -5.2  -4.66609   CTGGAGGAGCCCTAA          CAGGCCGGGGT CTT GCCCC-GCGTG          TTTTTCGGTAAAGTC  79 107
   TTMY_0115  100840 ..  100898 +  -6.1  -3.09635   GGCGTTGATGGGGTC CCTGGGCGGCC-TTC-GGGAGCG-CT CCAGGGCCCA AGCCTCTCCCAGGAGGGCCTCCCAGG TTCGGTAGTAGGCCT  49 520
   TTMY_0120 NONE
   TTMY_0121 NONE
   TTMY_0122  108132 ..  108189 +    -9  -4.07568   GCCCTCGAGGCCCCC G-CCTACCCCCTC-TCCCTGGGGAGCGC CTTC GCCCTCGCCTGGGCCGAGGAGGTGGGGC TTTTCCCGGGGGAGG  75 423
   TTMY_0123  108789 ..  108802 +  -4.5  -4.13014   ACCTGCTACATTGAC               CCTAG GCGG CTGGG                TTTTCCCCATCTCGG  62 108
   TTMY_0125  110732 ..  110745 +  -9.5  -3.53224   GGAGGCGGGGGTGCG               GCCGG TGAT CCGGC                TTTGGGGCGGGGATG  64 18
   TTMY_0126  110946 ..  110960 +  -2.1  -2.52623   CGTTGACTTCTTCTA              C-CCTG AGAG CAGGAG               GTGTTATGGAAGCGC  37 67
   TTMY_0127  111712 ..  111746 +  -3.5  -3.58533   CAAGGGAAGAGAAGA    GGGGGGTAAGTAAGGTG TGC CGCCC-ACC-ACCCCCC    TTTCCCAAGTTATCA  51 55
   TTMY_0128 NONE
   TTMY_0129 NONE
   TTMY_0130  113838 ..  113870 +  -8.4  -3.01712   GCCCTCCTTCAGGGG     GGTGGGACCTCCACG TGCA CGTGGAGC-CCGACC      TCTTGCCCAGGAAGA  55 61
   TTMY_0131  114705 ..  114715 +  -4.6  -4.30576   CCTTGGGAGGGGAAA                 GGTG AAG CGCC                 TTTTGGTGGTGAGCG  69 21
   TTMY_0132  115392 ..  115410 +  -2.3  -2.71712   CTTTCAGCGGGTCCT            GCCCCAGG TGCT CC-GGGCC             CTTTGAGGAGGGGAG  38 1
   TTMY_0133 NONE
   TTMY_0134  116373 ..  116384 +  -7.2  -3.60296   GTACACGTCAAAACT                GGGG ACCA CCCC                 TTTAGGATGGACCTG  58 9
   TTMY_0135 NONE
   TTMY_0136  118932 ..  118946 +  -5.6  -3.92602   GCTCGCACTGGTCCG               CCACCG GCA CCGTGG               TTTCTGGGGTGTTCC  63 112
   TTMY_0140 NONE
   TTMY_0141 NONE
   TTMY_0142 NONE
   TTMY_0143 NONE
   TTMY_0144  126578 ..  126596 +  -5.8  -3.87104   CTCTACTACTACACC             GCCGCGGG CCA CACGGGGC             TTCTTCTGGTCTGCC  60 171
     TTHB243 NONE
  Mesil_1865 NONE
   TTMY_0147 NONE
   TTMY_0148 NONE
   TTMY_0149 NONE
   TTMY_0150 NONE
  TNMX_03765 NONE
   TTMY_0152 NONE
   TTMY_0153 NONE
   TTMY_0154  132131 ..  132178 +   -14  -3.45571   CGGTAGGCGGAGGTC GGGCTGGGAATGGGCCAGGTCC AGGA GGGCCTGGGCCACCCTCAACCC TTCCTCTTTGAGCCC  75 225
     TTHB007 NONE
   TTMY_0158  136027 ..  136037 +  -2.4  -2.73124   ATTTTCAACTCCACA                 CCCC CCA GGGC                 CTTTAGGGCCTGCAC  39 158
    TT_C0799  141591 ..  141603 +  -4.7   -3.4241   AGGGGTACCTCTAAC                CCGGC CGG GCCTG                TTGCGTTTATTTCGT  51 27
   TTMY_0167 NONE
   TTMY_0168  143031 ..  143050 + -12.8  -2.72558   GCCCCACGGCCACCA            GGGGGGCC AAGG GGCCCTCC             TCCTTCAAGGCTTCT  63 161
   TTMY_0174  148550 ..  148571 +  -5.7  -4.11216   CCTCCGGAACTCTTC           CCCCGAGGG GCGG CCCTCCAGG            TTTTCCGCGTAGGCC  65 252
TaqDRAFT_5319  150184 ..  150198 +  -3.4   -3.9122   GATCTCCGTGTAGTG               GAGGGG CCT TCCCGC               TTCTTTGAGAAGCTC  59 174
   TTMY_0179  152270 ..  152286 +  -2.1   -3.9461   GGGCGCAGGCGCGGA              GCTCCTC GGG GGTGGGC              TTGTTCTTGGGCGGG  57 284
   TTMY_0183  154781 ..  154804 +   -21  -4.14739   CCGGAAGGAGAGGAA          GCCCCCCGCC TCTA GGCGGGGGGC           TTTTCCCCTAAGTAC 100 47
   TTMY_0187 NONE
   TTMY_0188  161093 ..  161105 +  -2.6  -3.27022   TCTCCGGGGGGCATA                GGTC CCGAA GGCC                TTGGTATAGGCTAGG  44 25
   TTMY_0189 NONE
 TtJL18_0917  164142 ..  164178 + -10.8  -3.62522   CCCTCACCCCTCTAT   GACCACGGG-CAGGATC ATGG GGTCCCGGCCCGTGGCC    TTCTTCAGGAACTTC  73 287
   TTMY_0201  174500 ..  174511 +  -7.2  -2.84325   AGGCCTTACCCTCTT                GGCG TATG CGCC                 TCGTCTTTGGCGAAA  50 39
   TTMY_0202  175386 ..  175428 +    -9  -3.87551   AGTGGACCACATTTA GCCCGAGGGGTTTCCCCTTA GCC TGGGGGCATGCGCTTCGGGC TTTGGCTTTCCTGCT  71 25
   TTMY_0203  176282 ..  176292 +  -4.6  -2.94412   GCGGGTGTTGGCCTT                 CCTG GGC CGGG                 TGCTTTAGGCTTGGG  45 7
   TTMY_0204  176477 ..  176496 +  -2.7  -3.74158   GGGTGTAAAATAGCC            CCCCGTG GCCAAG CGCGTGG             TTTCCGTCTCCTTGG  53 28
   TTMY_0205 NONE
   TTMY_0206  177952 ..  177994 +  -7.9  -2.89683   CGCCTGGGGAGCCGC CCCCTCTACGGGATTTTG-AC GCG GTGCAGAAATCCGTA-AGGGG TGTATGGGGTAAGCT  52 43
   TTMY_0207 NONE
   TTMY_0208 NONE
   TTMY_0209  180217 ..  180268 +    -2  -3.53091   CGGGCTAGGGAGCTG GCC-ATGCGGGCCCTCTTCGCCCAC ACC GTGGGGGGATGGGGCTGGAGGAGGC TTTCCAGCACGCCCT  48 33
   TTMY_0210 NONE
   TTMY_0211 NONE
   TTMY_0212  182141 ..  182153 +  -2.7  -4.10657   GTACGCCCTTGCCAA                GTTTG GGG TAAAC                TTTTACCGAGTATAA  59 231
   TTMY_0214  184619 ..  184647 +  -5.2   -3.9344   GGGGACGAAGGGGCC        GTAGGCCCGC ACCACAAAG GCGGGCTTCC        TTTCCTCTTGGGCTT  63 477
   TTMY_0218  187361 ..  187382 + -10.9  -4.11216   GGTGCTGGCGGCGAA           GGCGA-GGAG GAC CTCCCTCGCC           TTTTCCCGGTCCAGG  77 145
   TTMY_0220 NONE
   TTMY_0221  190677 ..  190706 +   -15  -3.48276   TTTCCGGGTGGAAGC       GCAGGAGGGCCC ACTCCC GGGCCCTCCTCC        TTATCTCGGGGAGGC  77 84
   TTMY_0225  194905 ..  194925 +  -4.6  -3.21099   GCTCTTCCGGGAGGG           GGCTTGGCC TTGC GGCCC-GCC            TTCCTCCTGGAGGGG  47 63
   TTMY_0226  195579 ..  195628 +  -7.7  -4.63527   CCAAAAGCCCTCCCG GGCGGTGGCGCACCGCGAAGACGA TGC TGGTCTT-GTGGGGCCCCTCCCCC TTTTTCGCCTCCTCG  83 251
   TTMY_0228  196946 ..  196973 +  -4.8  -3.31144   GAAGACCTCGCTCGG        GC-CCTGTACCCT TGA GGGGTGTGGGAGC        TTCTGGAAGTCCACG  49 11
   TTMY_0229 NONE
   TTMY_0230  199287 ..  199301 +  -3.4   -2.6696   TAACTCTTGACACGA               CCGGGC GTG GTGCGG               CTTCTCCTCCTCCTT  39 31
Ththe16_1112 NONE
   TTMY_0232 NONE
   TTMY_0233 NONE
   TTMY_0234  201856 ..  201896 +  -7.3  -3.36327   GGTCGGCGGAGACGA  GGAGGACGGCGAGCCCCTG GTC CCGGGCCTTGACGAGCTCC  TTGTGGATGAACTCA  55 254
   TTMY_0237  206904 ..  206914 +  -8.2  -3.28712   TCCGGGCCATCTCCC                 GGGC CAC GCCC                 TTCTCCAGAAGGGCC  58 378
   TTMY_0239 NONE
   TTMY_0240  209590 ..  209602 +  -4.7  -3.53224   TGCGGTAGAGGGGGT                CCCGC TCC GCCGG                TTTAAACCCCGCGTC  51 165
   TTMY_0242  211221 ..  211244 +    -6  -4.07568   TCCCTTCGTCCAACT          GG-CTTGGGGA AGC TCCCTAGGACC          TTTTGCCGGGGCCCC  66 63
  Halha_2113 NONE
   TTMY_0261  226889 ..  226913 +  -8.4  -4.05788   CTAGGCCCTCGGGTC          TAGGGCGGGG GACGG CCCCGCCCGC          TTTCCTTTAGGAGGC  72 37
   TTMY_0262 NONE
   TTMY_0263  228995 ..  229041 +  -2.8  -4.11216   GGCGCCGCCGTTCGG CCTCCTCCTGGAGGGCCTTTAG GCG TTGACGTTCCTCCAGGAGCCGC TTTTGCAGCTCGGCC  60 498
   TTMY_0269 NONE
         rho  237310 ..  237337 +    -9  -2.66316   ACCCTCTGCCGGGGC        CTCCCTGGGGGC TTGG GCTCCCGGCGGG         TGGTATGCTAAGGCC  54 62
   TTMY_0271 NONE
   TTMY_0272 NONE
   TTMY_0273 NONE
   TTMY_0274  240452 ..  240468 + -10.1  -2.57274   TGCTCCGCCTCCTGC              GGGGAGC GGT GCTCCTC              CTCTTGGTTCTGGCC  57 72
   TTMY_0275 NONE
   TTMY_0276 NONE
   TTMY_0277 NONE
   TTMY_0278  245734 ..  245751 +  -3.3  -3.60098   GCCGGCGGTGGGGGC             GGCCACGG ACC CCG-GGCG             TTTGGCGTAGACCGT  53 487
   TTMY_0288 NONE
   TTMY_0289 NONE
   TTMY_0290 NONE
   TTMY_0291 NONE
   TTMY_0292 NONE
   TTMY_0293 NONE
   TTMY_0296  258569 ..  258597 + -14.6  -3.57263   AAGGCCCCAGGGCCG       CGCGGAGGTCGGC AGCC GCCGGCCTCC-CG        TTTGCCAGTGGGGGT  81 43
        greA NONE
        lysS NONE
   TTMY_0299  261433 ..  261461 +  -5.2   -4.4078   GTGGAGCCCGAGGGC       GAGCGGAAGCGGG TAAA CCC-CTAACGCTC        TTTTCCTTCCCGGCA  72 2
   TTMY_0300  262261 ..  262273 +  -2.6   -3.6682   GGAGCTCGCCTGGAC                CCTG GCGGA CGGG                TTTGAGTACGTGGAG  51 147
   TTMY_0301 NONE
   TTMY_0302 NONE
   TTMY_0303 NONE
   TTMY_0304  264177 ..  264198 +  -2.2  -2.59881   CCTACCACACCGCCA           TCCCCG GCTTCGTCTA CGGGGG            CTTCTCGCCTCCCTG  38 176
   TTMY_0305  264563 ..  264590 + -11.2  -3.65812   CCCTTGGTCTATCCT        GG-ACCCCGGCCT TAA GGGCCGGGGAGCC        TTATGTTCCAGCAAC  73 93
   TTMY_0306 NONE
   TTMY_0307  266185 ..  266207 + -17.7  -4.07246   GGGAGGGCCGGCCGA           GGCCCCGGG AAGTC CCCGGGGCC           TTTCGTTTAGCATGG 100 42
   TTMY_0308  266506 ..  266533 +  -8.4  -3.17075   GAGATCGGCCGGTTC        GGCGCCCCTTACG CCC TGAAAGGGG-GCC        TTAGGTTCCGGGGAG  56 86
        trmD NONE
        rplS  268191 ..  268207 + -15.1  -2.75481   GGAGCGCGGGAAGGG              GGGCGGC CTG GCCGCCC              TCCTTCGGCTTAGGA  72 43
   TTMY_0312  269877 ..  269895 +  -4.4  -4.11394   AGGGGCTCGTAGAGG             GCCCGGAG TTC CTCGGCGC             TTTTGAAGGTGCCGT  63 218
   TTMY_0314  270945 ..  270962 +  -8.4  -3.64822   TCAGGGTGATGGTGG             GGCTGG CGTGGC CCAGCC              TTTCGCTCACCACCT  64 210
   TTMY_0319  274432 ..  274469 +  -6.1   -4.2349   CCAGGGCCATCTTGA   GCCCGTCCGCCCCGGTTC CCT GTACCGGGGTGT-TGAGC   TTTTCCGTGTAGCGG  70 53
   TTMY_0323  280060 ..  280093 +  -7.9  -4.56597   ACGCCGCCCACCAAA     GGAACTCCCCCCGCC CTCG GGCGGGGGGAGCCGG      TTTTTAGCGGCGGAC  79 271
   TTMY_0336 NONE
   TTMY_0337 NONE
   TTMY_0338  291965 ..  292007 +  -3.9  -2.78384   CACCGCGGCTTCCGC CGGGGGCCGGGTAGAATGG AGCCG CTATGAAGCCCGGCCTCCA TATCGTCCAGGGGCC  41 47
   TTMY_0339 NONE
   TTMY_0340  296242 ..  296260 +  -3.8  -2.76261   CAAGCCCCTCGCCGA             GGCCTT GGAGGGG GAGGCC             GTTTCCGGGTTCGCC  41 51
   TTMY_0341  296818 ..  296846 +  -3.2  -4.78149   AGAGGCGCTCCTCTC       CCT-CGGGG-GT GATAAGA ACTCCCCGTAGG       TTTTTCCCTTATCAC  75 73
   TTMY_0344  298458 ..  298483 +    -4  -4.05446   TTGGCGGCCTCCGGG         GGAGG-GGCTT CCCCC AACCCACCTCC         TTTCTGCTTCCAAGG  63 186
   TTMY_0347  300892 ..  300910 +  -3.8  -2.58544   AAATCAGGGTGTCCC             GGAGCC AGACGTA GGTTCC             CTTCTGCCCGTGGAG  40 458
   TTMY_0355 NONE
        marR NONE
   TTMY_0357 NONE
   TTMY_0358  309540 ..  309557 +  -3.3  -2.79183   GGGGAGGATCGGGAG             GCCCTTG AGGG CAGGGGA              TCTCCTGGGCCTGGA  40 18
   TTMY_0359  310273 ..  310313 +    -3  -3.96148   CGTTGAGCTCAATGA GGCCGAGG-TCGGAGAGGC TAAG GCCTGCCCGCTCCAGGGCC  TTTCTGGTGGCGGGC  59 338
   TTMY_0362 NONE
   TTMY_0363  314421 ..  314437 +  -2.1  -3.34344   CGACCGGTATCTGGA              GGAGGCT TTT GGCCGTC              TTCCTTGACACCTCG  44 1
   TTMY_0364 NONE
   TTMY_0365 NONE
   TTMY_0366 NONE
   TTMY_0367  317763 ..  317775 +  -6.2  -3.71527   CCCGTGGAGGCCTTA                GGCC ACCGG GGCC                TTTAGGTGCTTGCGG  59 47
   TTMY_0369  319428 ..  319440 +  -4.7  -2.74144   GTGGAGTGATAGATT                GAGCC CGT GGCGC                CTTTGAGGATGAAGG  43 174
   TTMY_0370  321032 ..  321070 +  -6.5  -3.65902   CGACCACATCGCTGT   TCCACCCGGAGACGGGG AAGGC CCTCGCCTGAGGGCGGA   TTTCCCTCCGCTCCC  59 430
   TTMY_0372  322078 ..  322110 +  -5.4  -2.57564   CCAAGCGGGCCCGGG     CAGGGCGGCGGGGAC ACTT GACCCT-TCGCCCAG      GTTGTGCGAAACTAA  44 49
   TTMY_0373 NONE
   TTMY_0374 NONE
   TTMY_0375 NONE
   TTMY_0376 NONE
   TTMY_0377 NONE
        paaJ NONE
   TTMY_0379 NONE
   TTMY_0380  327711 ..  327738 +  -9.8  -2.73875   TAGCTCCCGATCCCC        TCCTCCCCCTCC TCCA GAAAGGGGAGGA         TGATCTTGCGCCCGG  54 288
   TTMY_0396  342109 ..  342130 + -12.9  -3.30635   GGGCCACAGGGCCCT           GAGCCGGGC CACC GCCCGGCCC            TTGTCCGCCCCTTTG  70 225
   TTMY_0400 NONE
   TTMY_0401 NONE
   TTMY_0402  348102 ..  348124 +  -6.8  -2.79302   GGCTTAGACCCCGGT           GACCCCCTGG GCC CCGGGAGGGC           TCTCATCCGCCTCAT  48 24
   TTMY_0403  349233 ..  349249 +  -2.1  -3.28791   AGGGTGTATAAAAGA              GGGCATG CGG CGCGTCC              TTGTGGCGGGCAACT  44 30
   TTMY_0404  350280 ..  350335 +  -8.9  -3.53811   GCACTCCAGGGAGAA GGC-CC-CGGCCTCGAGGTCTTGGAGG AAGG CCTCGAGGGCCGCAAGGCCCAGGCGCC TTTCCGCGAGGTAGG  61 316
   TTMY_0407 NONE
    TT_C0576 NONE
    TT_C0576  352664 ..  352676 +  -6.9  -2.96274   CACGCTGGCCAACCT                GGGGG GAG CCTCC                TCTACTTCTACGCGA  51 350
   TTMY_0410 NONE
   TTMY_0411 NONE
   TTMY_0412  355356 ..  355366 +  -8.2  -2.79796   CACCTCGCCTTGGAG                 CGCC TGG GGCG                 TGTGGTAAACTCCGC  52 7
   TTMY_0413  356469 ..  356500 +  -7.8  -3.01712   CAACGAGGCCCTGGA      CCTGGCCCTCGCCCG GGA CGAGCG-GGTCCTGG      TCTTCGGGGAGGACG  53 69
   TTMY_0414 NONE
   TTMY_0415  358220 ..  358274 +  -6.5  -2.74605   GCGCTGGAAGCCAGG ACCTCGGAGAGGATG-GCGAGGAAGA GGTAGG TCCACC-CGCTCATCC-CTCCGAGGC TACCTTTTCCCGGGG  46 296
   TTMY_0417 NONE
TaqDRAFT_5362 NONE
 TtJL18_1127 NONE
   TTMY_0420  361730 ..  361741 +  -3.6  -4.03413   CGGGCCACTCCTCCG                GGGT GGGA GCCC                 TTTGTGTGACCACCT  61 427
   TTMY_0422  363239 ..  363252 +  -5.2  -3.28712   TGAAGAGGTACTGGC               CCCG TTTGCT CGGG                TTCTCCAGGACGGCC  51 362
   TTMY_0426  364994 ..  365019 +  -4.5  -3.78934   CCGGGAAGGCCTCGG         GGAAGAGGCGC CTAA GCTCCGCCTCC          TTGTTCTCCCGGGCC  58 434
   TTMY_0428 NONE
   TTMY_0429  367634 ..  367653 +  -5.6  -3.73775   TTCCCTCTAGGGCGC            GCCCCTTT CTAC ATGGGGGC             TTTGGTGGCGGTGCG  57 132
   TTMY_0430  367940 ..  367977 + -15.5  -3.06183   ACGGGGCTCAAGCTC   TTGCAACCGGGCGGATG AAGC CATCCGCCCGGTCGCCC    TTCCCTGGGGGTCGC  77 140
   TTMY_0438 NONE
   TTMY_0439 NONE
   TTMY_0440  377487 ..  377501 + -11.4  -3.16191   CCCGCCTTGGTCCAA               GAGGCC ATG GGCCTC               TTCCTCCCCCTCTCC  66 514
   TTMY_0442 NONE
   TTMY_0443 NONE
   TTMY_0444 NONE
   TTMY_0445  381645 ..  381655 +  -2.4  -3.55444   CATCCGCAAGGAGGT                 GGCC CAT GACC                 TTTGAGGAGTACCAG  48 10
   TTMY_0446  382008 ..  382044 + -13.6   -4.3534   CTCTACGGCATGATC   CAGCCCGCGGC-CGGCG AAAC CGCCGCGGTGCGGGCGG    TTTTCATCATTGACC 100 57
        cysS  386832 ..  386854 +  -4.6  -3.73106   ACTTCTGCACGGCGA           GCCCGGCCAC CAT GAGGGCGAGC           TTCTTCAGGTTTTGG  58 430
  TSC_c13210  393203 ..  393213 +  -3.2  -3.01915   CTAGTGGAGGTGATC                 TGTG CGG CGCA                 CTCTTTTTCTGGCAA  42 37
  TSC_c13220  393806 ..  393818 +  -6.2  -3.78934   CTCGGGGTAGTCCCG                GGGC CTTAA GCCC                TTCTTCTCCAGGCGG  62 76
   TTMY_0461  398179 ..  398198 +  -4.2  -3.25823   GTCCGCCTCGCCCTG            GAGCACCT GTGA GGGTCCTC             TTCCTCTCCGACGCC  47 14
        rfaG NONE
   TTMY_0463 NONE
   TTMY_0464 NONE
   TTMY_0465  402745 ..  402765 +  -4.6   -3.5394   GCAAGGGGCCGTATA           CGGCCACCG CCCC CGG-GGCCA            TTTGAGCGAGCCTTT  52 332
   TTMY_0467 NONE
   TTMY_0468  405446 ..  405488 +  -3.9  -3.03159   GCCCGCCTGAAGGCC CCCTGG-GCGGAGTAGGTGG CGAG CCTCCCGCCCCGCTTCAGGC TCTTCCGGAGCTTGA  44 31
  TNMX_12065 NONE
   TTMY_0471 NONE
   TTMY_0472  407010 ..  407023 +  -9.5  -3.32963   GGAGGACGGCTTCTT               CCGGG TGCC CCCGG                TTCTGGAGTAGCCAT  61 1
        serS NONE
   TTMY_0474 NONE
   TTMY_0475 NONE
   TTMY_0476  410183 ..  410231 +  -4.4  -3.21099   CCGAGGTGGTCTACA CCGGCTTCGGCACC-CCCATGCTC CGG GGGCCTTGGCGGTGCAG-GGCGGG TTCGTGGTGGGCCAG  47 52
   TTMY_0477  411556 ..  411604 +  -7.2  -3.29144   GCCCGGGCCTACCTC GCCGC-CCTGGTCCAGCTCGGGG CCTA CTCCCCTCTGGGCCGGGAGGGGC TTCTCGGCGGCCTGG  54 336
   TTMY_0480  413544 ..  413570 +   -15  -4.08216   GTCACGCCCTACCCC         GGCCAGGGCCGC CCT GAGGCCCCGGCC         TTTTCGGACACCTAA  89 162
   TTMY_0483 NONE
   TTMY_0484  416231 ..  416264 + -19.5  -3.16564   GAAGGTCCTTTTTGG     GGCCCCCACCGCGGC GAAA GCCGCGGTGGGGTAC      TTAATCCCGTACCGC 100 90
   TTMY_0485  417688 ..  417715 + -19.8  -2.94099   GCGCCCTCTAAGGCG        AGCCCCCCGGCC TCGA GGCCGGGGGGCC         TATCTGGTGGAGCGG  95 30
   TTMY_0487 NONE
         tsf  419351 ..  419377 + -16.5  -4.18018   AGCCATGAAGGCGCA         CCGGGGCCCGG CGTTT CGGGGCCCCGG         TTTTCCATGAAGCCA 100 40
   TTMY_0489 NONE
   TTMY_0490 NONE
   TTMY_0491 NONE
   TTMY_0492 NONE
   TTMY_0493 NONE
   TTMY_0494  424314 ..  424359 +  -6.7  -3.09516   GGAAGGCCACCACGC CGAGGCCGGGGACGAGGTAGAG GAG CTTCACGTCGGCTCCGCCC-CG TTCCGTGGTGAAGGC  49 74
   TTMY_0501 NONE
   TTMY_0502 NONE
   TTMY_0503 NONE
   TTMY_0504 NONE
   TTMY_0505  430420 ..  430440 +  -7.6  -2.67803   GAGCTCTCATCACTT            TGAGGGCT GGCTG AGCTCTCA            TCACTTTCCTCCCCC  51 77
        prkA NONE
   TTMY_0508  433035 ..  433045 +  -2.4  -4.06055   CAGGGAGCGGGCGGA                 GGCC GAG GGGC                 TTTCCTTTCCCCCGT  58 77
   TTMY_0509 NONE
   TTMY_0510  434676 ..  434690 +  -6.4  -3.60971   CGTTGAGGACCACCG               GCTTTC CGC GGAAGC               TTTCCAGGTTCACCT  59 351
   TTMY_0514  437889 ..  437899 +  -2.4   -4.2349   GGTGGGCCGCCCAAA                 CCCC AAG GAGG                 TTTTCCATGTACGAG  62 66
   TTMY_0515 NONE
   TTMY_0516  439336 ..  439362 +  -3.5  -3.64703   CATGTGGTAGGCTTC         GGGGGATGCCG CGCTA CGGGTTCCACC         TTTCCGTCGCCGGGA  54 46
   TTMY_0517  440197 ..  440207 +  -2.4  -3.53811   GGAGGCCCCTAAGTA                 CCCC ACC GCGG                 TTTCGCCGCGGTGGG  48 69
   TTMY_0521  444130 ..  444149 + -16.4  -3.81926   CCTCTCCGCCAAAAG            GCCCCGGC GAAG GCCGGGGC             TTCCTTTTTCCGGTG  91 33
   TTMY_0522  446179 ..  446189 +  -2.4  -3.29144   TCCGCTCCTCCATGA                 GGAG GGC CGCC                 TTCTCCAGGGGCTCG  45 367
   TTMY_0525  447619 ..  447637 + -13.8  -2.82193   GCCCCAGGCCCAATA             GGGGGGCG GCC TGCCCCCC             TATAATGCCTCTGAT  71 43
   TTMY_0526  450253 ..  450273 + -11.1  -2.79133   TCGGCTAAGGGGCTT            GCCCCCC CTCCCCC GGGGGGC            TATGATAGGCGCTTG  60 33
   TTMY_0527 NONE
   TTMY_0528  451639 ..  451649 +  -2.4  -3.36492   GCAGGCCCCTTACAA                 GGGC TGA GGCC                 TTCTCACCTTGGGCC  46 19
   TTMY_0529 NONE
   TTMY_0530 NONE
   TTMY_0531  454712 ..  454741 + -12.2  -4.63218   TGGGAGGCAAAACCC       ACCCCTTTTGCG CATAAC CGCAAAAGGGGC        TTTTCTTGACCGCCC 100 128
   TTMY_0532 NONE
   TTMY_0533  456805 ..  456830 + -20.5  -3.32844   AAGCCTGAGGGAAGG         CCCCATCCCGG GAAG CCGGGATGGGG          TTCTAAACTGAGGCC 100 39
   TTMY_0535 NONE
   TTMY_0536 NONE
   TTMY_0537  459404 ..  459445 +  -5.5  -3.99324   GACTTCCTCTACCTG CGCTACGGCCGGGACCCCC TCTT GGGGGCGGTGGCCGCGGGG  TTTCTCGTCCTCGGC  63 506
   TTMY_0539 NONE
   TTMY_0540 NONE
   TTMY_0541  464017 ..  464027 +  -8.2  -3.17714   GCTCGGGGACGTGGA                 GGGG GAT CCCC                 TTCCTGGGGCTTTCG  56 245
   TTMY_0549  468423 ..  468449 +  -2.3  -3.20723   CGCAGGATCGCAGGG        GGCGGA-GCTACA CGG TG-AGCGTCCTCC        TTCCCTTCGTGGCCA  42 8
   TTMY_0550 NONE
   TTMY_0551 NONE
   TTMY_0552 NONE
   TTMY_0553  471888 ..  471901 +  -5.9  -3.66178   CGAACGGCGGAAGGG               GGGGC TGGA GCTCC                TTTCCGCTTACGACG  57 393
   TTMY_0555 NONE
        yceI NONE
TaqDRAFT_4148  473323 ..  473337 +  -8.5  -2.58544   AATGGAGGGGGAAAT               CCGCC CGTGA GGCGG               CTTCTCGGCCTCACC  52 16
   TTMY_0558  474185 ..  474216 +    -7  -4.56597   GTAGGCCATACCGCG      AAAAGGGCGCCCCC TAAA GGGGGCGCCCAAGG       TTTTTGGGAGGGAAG  77 117
   TTMY_0559 NONE
   TTMY_0560 NONE
   TTMY_0564  480107 ..  480137 +  -7.5  -3.16881   CACGGCGGTCTTGCG       GTTGAGGTTGCCG AAAAC CGGCACCCTGAGC       TTGATGCGGTCAATG  54 429
   TTMY_0566 NONE
   TTMY_0567  482112 ..  482130 +  -9.5  -2.77899   GCGCATCTGGCTTTT             GTGGGCC CGGAC GGCCCGC             TCCTTCCTGCGCACC  55 119
   TTMY_0569  483867 ..  483878 +  -7.2  -3.14132   CTCATCCCCAGGTTC                GCCG AGCT CGGC                 TTCCTAGGCCCCACC  52 188
   TTMY_0570 NONE
   TTMY_0571  485943 ..  485979 +  -4.2  -4.63218   GGGGCCCTGGAGGAG   GCC-CTCTCCGGCCTGG ACTA CGGGGCGGGGGTGCGGC    TTTTCTTCGGCACCG  73 186
        pmbA NONE
   TTMY_0573  488034 ..  488046 +  -4.7  -3.42574   AAACCCGGTAGTATA                GGCGC CAT GGGCC                TTCTCGTCGGCTTCC  51 25
   TTMY_0574  489038 ..  489063 + -12.5  -4.59773   CCGAAAGGAAGGGAA         GGAGCGGAGGC CCTG GCCTCCGCCTC          TTTTTGGAGGTGGCC 100 286
        pyrR NONE
   TTMY_0576 NONE
   TTMY_0577 NONE
   TTMY_0578 NONE
        pyrC NONE
   TTMY_0580  493200 ..  493226 +  -4.2  -4.58395   GGGGCCTTCCCGAAA         GCCCCCCGGCTT CCC GAGCGAGAGGGC         TTTTTAGGCCCTCCC  74 332
TaqDRAFT_4176  494559 ..  494573 + -12.8  -2.79183   GTGGGCCCCATGGCC               CCCGGG CCG CCCGGG               TATCATGGGGGTAGA  65 53
   TTMY_0583 NONE
   TTMY_0584 NONE
   TTMY_0585  497342 ..  497355 +  -9.5  -3.78934   GCGGACGGGGGGGGA               CCCGG GGCA CCGGG                TTCTTCTACCGGGAA  71 397
   TTMY_0586  498419 ..  498440 +  -4.3  -2.78816   GGGCCCCTAAGCCAG           GCCCTATGG GTAC CTGCAGGGC            TGTAGTAGGAGGTAC  42 277
   TTMY_0588  500707 ..  500734 +  -4.1  -3.36175   TGGGTCACCGCCACC        CCCTG-AGGAGC CAGCC GTGCCTGCAGGG        TTGTCAATCCACCTT  49 164
   TTMY_0591  504488 ..  504501 +  -6.7  -3.52192   GTACCATGCCCCCCC               CCTTG CTGT CAAGG                TTCTGTGGGCTTGCC  58 333
   TTMY_0596 NONE
   TTMY_0597  507694 ..  507719 + -11.8  -2.57132   TCCTCTACACCCCCT         CCCTGCCCCG CTTCTT CGGGGCAAGG          CTTCTCGGCAAACGC  61 47
   TTMY_0598 NONE
   TTMY_0599 NONE
   TTMY_0600  510103 ..  510140 +  -8.4  -5.41746   TAAGCGCCACGCCCA   ACCCCTTCTTGGCG AGAGAACGGA CGCCGGGAAGGGGC    TTTTTTTGGCCCCTT 100 243
   TTMY_0603 NONE
   TTMY_0604 NONE
   TTMY_0605  514745 ..  514767 +  -3.5  -4.07687   ATCGTATGGAGCTGG           GTTTGCTTT CGGAA AAAGGAAAC           TTTTCCAGGGAAAAT  61 88
   TTMY_0606  515529 ..  515539 +  -2.4  -3.53012   CCACACGAAGGCCAC                 GCAG TAG CGGC                 TTTCGCCGCGGGAAA  48 106
   TTMY_0610 NONE
   TTMY_0611  519392 ..  519408 +    -5  -3.71848   CCGGGGAGGTACTCG              GGCCCC CGCTT GAGGCC              TTCTTGGTAGAGGCC  55 284
    TTHA0745  525044 ..  525061 +  -3.3  -3.25015   ATACACCCAGGCCTC             GCTCACC CCAG GGTTGGC              TTCATAGTCCTTGGC  45 50
    TTHA0742 NONE
    TTHA0742 NONE
   TTMY_0622 NONE
   TTMY_0623  529419 ..  529446 +  -8.5  -3.31144   AAGACCCCCCCCGAG       GGAGCTGCC-CGT GACC ACGAGGC-GCTCC        TTCTCCCCCTCGAGG  58 373
   TTMY_0625 NONE
   TTMY_0626  532866 ..  532889 +  -9.4  -2.62184   GCCTCACCCCCAGGG          AGGCCCTGGC CACC GCCCGGGCCC           TCCTCTCCCGGGAAG  54 320
   TTMY_0627  533639 ..  533655 +  -6.5  -3.53012   CCGAACCCGCTCCAG              GCGCC TCTGGTC GGCGC              TTTCCACCACGAAGC  56 431
   TTMY_0630  535510 ..  535529 +  -5.6  -2.74012   AAGCTCACGGAGGTG            GGGGATGC GTAG GCTTCTCC             TCCTTCCCCTCCTCG  45 14
   TTMY_0631 NONE
   TTMY_0632 NONE
   TTMY_0633 NONE
   TTMY_0634 NONE
   TTMY_0635  538918 ..  538943 +  -4.6  -2.82895   CCCCGTGGAGGTGGT         GCCGTGAGGG AAAACC CCCTGGTGGC          CTTCTTCGTGGAGCG  44 19
   TTMY_0636 NONE
   TTMY_0637  542975 ..  543001 +  -4.9   -3.3197   CTAGGGGCATGGACC         GGAGCCAGGCG GGCCA CGCCGCGCCCC         TTCTGGGAATGCTAT  49 37
   TTMY_0638  545849 ..  545873 + -20.7  -4.25104   CCACGCGAGGGAAAA          CGCCCCGGGCT TTA GGCCCGGGGCG          TTTTGGTGCCGGGGA 100 43
   TTMY_0649  553175 ..  553196 +  -7.9  -3.71848   CCAGATCATCGTCCC           CTTGGGGGC GGTG GCCGCCGAG            TTCTTCCTGGGGGAG  63 376
   TTMY_0650  553555 ..  553588 + -19.5  -3.16683   GGAAGGTCCTTTTGG     GGCCCCCACCGCGGC TTTC GCCGCGGTGGGGTAC      TTAGTAAGATGGCCT 100 144
   TTMY_0651  554581 ..  554593 +  -3.3  -3.28924   TCCTTCCCGGGGAAT                GATGG ACC CCCTC                TTCTGGGACGCCCTC  46 24
   TTMY_0652 NONE
   TTMY_0653  556415 ..  556427 +  -4.8  -3.07222   AGCCGTCCGCGAAGC                CCCT CGGCC AGGG                TCTTGGGGTCGTCCT  45 195
   TTMY_0655 NONE
        aspS NONE
   TTMY_0657  560579 ..  560590 +  -5.8  -3.14051   GGGTGGCCTTCACCG                GGCT TTGG AGCC                 TCTTCGTGCCCCTCA  49 101
   TTMY_0658  560994 ..  561008 +  -2.1  -3.14051   TGAGCGCGGGAAAGC              CCATGG TCCG CC-TGG               TCTTCGTAGACGTGG  42 38
   TTMY_0659 NONE
        asnC  563391 ..  563418 + -21.4  -2.62184   GCCTTTTGCCGGGGC        CCCCATGCTGGC GCAA GCCAGCATGGGG         TGGTATCAAACCCCG 100 165
   TTMY_0671 NONE
        nusA NONE
   TTMY_0673 NONE
   TTMY_0674 NONE
   TTMY_0675  575582 ..  575615 + -20.3  -2.81272   GCCTAGTCCCCTTCC     AGCTCCGCTTCCGCC TTGT GGCGGAGGCGGAGCG      CTTTAGGTCCTCCTG 100 35
   TTMY_0676  576312 ..  576325 +  -5.2  -4.07568   AGAAGGCGCAGAGGG               CCCC GTAGAG GGGG                TTTTCCGGGGAGGCG  65 111
   TTMY_0681 NONE
   TTMY_0682  581325 ..  581348 + -13.8   -5.0538   AGTGAGAAGCCGGCG          CGGGGTGGGC CTCG GCCCACCCCC           TTTTTTCCCATGCGC 100 36
   TTMY_0683 NONE
   TTMY_0684  583260 ..  583284 +  -5.7  -4.25104   GCCTCCTCGCGGGCT          CGGTGAAGG GGTAGGG CCTTCACCC          TTTTCATGCCCGCCC  69 12
        tolQ  584187 ..  584223 +  -9.3  -4.08216   AGCCTCTCCTTGAGG    GCGGCCACCGCCTCC GGGGCGA GGAGGGGGTCCCCGC    TTTTCGCCACCATCA  74 519
   TTMY_0694  593032 ..  593045 +  -3.7  -3.53012   CGTGCAGCTTGGGCG               CGGGG AGTG CGCCG                TTTAAAGGAGGACGC  51 7
        hemD NONE
   TTMY_0696 NONE
   TTMY_0697  595286 ..  595331 +  -6.7  -4.13304   CTGGTGAAGATCCCC GCG-GGAGGGGTCTACCTCCTC AAG GGGCAGGTGGACCCCAGGGCGC TTTTCCGGCTCCTTT  67 185
   TTMY_0699 NONE
   TTMY_0700 NONE
         sat  598109 ..  598138 +  -8.5  -3.51329   GCCGACTCCGGGCTT       CCCCCCGCCGCC ACCCAAA GG-GGCAGGGGG       TTCTGCTTGGGCCTG  61 499
   TTMY_0703  600100 ..  600111 +  -3.6  -3.59315   AGAGCTCCTCGGCGA                GGGT CCGC GCCC                 TTTCCACCTCCTTGG  53 477
 TtJL18_1411 NONE
   TTMY_0710  604904 ..  604925 +   -13  -3.72576   GCCTCGTAGGTCCCG           GGGCCCTC CAGGAA GAGGGCCC            TTTCCTGGAGGAGGG  79 129
   TTMY_0717  609080 ..  609130 +  -3.2  -3.33261   TCCAGGAGGAAGCGG TCCTGCCGCGCCTTCTCC-ACGGGG AGGA CCCCGAAGGTGAAG-CA-GGCGGGG TTGTCCGCCTTGGGG  47 179
   TTMY_0720 NONE
   TTMY_0721  611629 ..  611658 +  -2.1  -3.09516   AGCTCGTGGAAAGGT       GAGGTGCGC TTTTGGCCTGGC CCGCACCTC        TTACGTGCTAGAACG  42 24
   TTMY_0722 NONE
   TTMY_0723 NONE
GEI7407_2037 NONE
Nos7524_0341  616522 ..  616557 +  -2.5  -3.05384   CGTAGCGGGTAAGTT    GGGGAGTAGATGAGG ATCGCC CTTTTTCTACCCTCC     TTGGATGGCGGCGGC  41 13
   TTMY_0726  617946 ..  617956 +  -3.2  -4.27033   TTTGGGGTCGTGAGA                 TTCC CTT GGGA                 TTTATATCTGTTTTA  63 316
   TTMY_0727 NONE
        rfpB NONE
   TTMY_0729 NONE
   Dtur_0588 NONE
Cha6605_4745  623779 ..  623799 +  -5.4  -3.83026   ATCATTAGGAGTGAA            GGCAGATG AAGCG CATCTACC            TTTCCTCTCCACACC  60 33
        spsC NONE
   TTMY_0733 NONE
   TTMY_0734 NONE
  RLTM_04816 NONE
   TTMY_0736  629849 ..  629859 +  -2.4  -4.89852   GGATCAAGGGGTCCA                 GGCC CCA GGCG                 TTTTTGTAGATCTCC  78 467
   TTMY_0741 NONE
   TTMY_0742  633221 ..  633249 + -10.3  -2.71731   AGCGTTCGTCCCGGA        GAAGCTTCCCGTA GCC TTTGGGGAGCTTC        TCCTTGAACCCTAAG  57 413
   TTMY_0744 NONE
   TTMY_0745 NONE
   TTMY_0746 NONE
   TTMY_0747  637729 ..  637772 +  -4.5  -4.56597   GGATCCCTTTCTTAA ACT-CCCGGGC-CGCCTG-GCC GAT GCCACGGGCGAGCTCGGGAAGC TTTTTGGCGCCGAAG  74 72
   TTMY_0749 NONE
   TTMY_0750  638064 ..  638097 + -15.3  -3.54543   TCCCGTCTCCCGCTC     CAGCCGGGCCGGGGCT AAA AGCCCCGGCTCC-CTG     TTTGGGCCCGTAGCT  83 26
   TTMY_0751  638636 ..  638656 +  -6.1  -3.05844   CGTGGGGGATGGGGA           CGGCC-CG CCGCCC CGAGGCCG            TCTTGGGCTGGGAGA  49 486
  TNMX_03605  641012 ..  641027 +    -6  -3.53012   CGGGCGAAGGCCAGG              GCCTCC TCGA GGCGGC               TTTGGGGGAGGAAGA  53 432
Ththe16_2389  646235 ..  646247 +  -4.7  -3.53224   CTTGAAAGGTCTTAG                GGCGG GCA CCCCC                TTTCCCGGAGCCCTC  52 69
  Theos_2371  646978 ..  646994 +  -5.7  -2.62263   GAGGGGCTTCTAAAA              GGGCTCC GAG GGGTCCC              TCCTGTGGGGCCCCT  44 28
   TTMY_0767 NONE
   TTMY_0768  647949 ..  647964 +  -3.2  -3.17051   CACGGGAAGGGAGGT              GCTTCG GCGG TGAGGC               TCTTGCTGGTGGAGG  44 13
   TTMY_0769 NONE
   AORI_1961  649378 ..  649401 +  -4.5  -3.14564   CAGGCCAGACGACTT          GGGGAACTG GTAGAG CAGCTCCTC           TTCCTGGCCCGGTCC  47 286
   Mrub_3034  650179 ..  650203 + -22.9  -4.07687   CGGGCCCGCCAGGCC          CGCCCTCCCCC ACC GGGGGAGGGCG          TTTTCACCCCAGGGT 100 483
   TTMY_0775  655042 ..  655064 +  -4.6  -3.36327   TCTGCCACATGGCCC           GGCGGGCCTC GTC GTAGCCCGCG           TTCTCCCTGAGGTCC  49 323
 TtJL18_1452  658355 ..  658367 +  -6.2  -3.72576   CAAGGGGGAAAAGGT                GGCC CCCAA GGCC                TTTCCTAGGAAGAAA  59 133
   TTMY_0783  663726 ..  663738 +  -3.3  -3.30124   GGCCTCAAACATCAG                GTCCA CCA TGGCC                TTCTCCAGGATGGCC  47 235
   TTMY_0793  669290 ..  669322 +  -6.7  -3.54424   CTCGCCAAGGGCCTG      GAGGAGGCCGGGGTG AGG CTCCTCGGCACCCCC      TTTAGCGCCATCCAC  58 43
        carB NONE
   TTMY_0795  671016 ..  671036 + -10.3  -3.17212   TCCGCGGCCACGGGG            GTCCCGGGC CAC GCCCAGGGC            TTCGTGGCCTGGTAC  62 226
   TTMY_0796  671653 ..  671669 +  -3.6  -3.57144   GTACCGGGACTACCT              GGCCCT AGCCG AGGCCC              TTTAGGCCTCCCGAG  51 4
   TTMY_0797 NONE
   TTMY_0798  673992 ..  674010 + -10.3  -3.18383   GAGCCCAGGGAGGAA             GCCTAGC CCGCC GCTAGGC             TTCCTCCCTGGGCCT  62 20
        panD NONE
   TTMY_0801  676479 ..  676500 + -14.5  -2.80816   ACGGGAGTAATCTAG           GCCTACCGA CCAT TCGGTAGGC            TATGGTGACTGCAAC  73 54
   TTMY_0802 NONE
   TTMY_0803 NONE
   TTMY_0804 NONE
   TTMY_0805  680371 ..  680402 +  -2.2  -4.32436   GCCTCCTCGGAGGGC      GGGCATGAGAGA GAAGGTAA TCTTGCAGGCCC       TTTTCCTGATCCTCT  65 18
   TTMY_0806  681312 ..  681327 +  -2.5  -3.17527   GCCCACGCAGTTAGT              GTCCG GTTTGG TGGAC               TCTTGGTCCTAAATG  42 27
   TTMY_0807  682087 ..  682126 +  -4.8  -5.04385   GAGGGCTGGGGAAAT  GGTGGCCCTCCTCGGCCCT AAT GGGGCAG-GCAAGACCACC  TTTTTTAAGGCTCTC  85 114
   TTMY_0809  682808 ..  682859 +   -10  -2.91144   GGAAAGTGGCTTCAT CACGGGCCAGGCCATTTACGTGGAC GGA GGCCGC-TCCGTGGCCGGGCCTGTG TGGTTTGGGAGGTGA  59 128
   TTMY_0810 NONE
   TTMY_0811  683726 ..  683737 +  -3.6  -3.44319   GTCTTCTACCGGGTG                GGCT AAAA GGCC                 TTATACTGGGTTCAA  49 20
   TTMY_0812 NONE
   TTMY_0813  686184 ..  686205 +  -6.5  -3.53224   CGAGGCCAGGCCGGA           GCCCTACCGC ACG GCGG-AGGCC           TTTAGGGAGCGGGTC  56 75
   TTMY_0814  687203 ..  687255 +    -4  -2.70932   GCACGAGGGCCTCCT CAAAGGCGGGGACGT-AGGTGC-CCT CGG GGGCGCACCCCAGGTCCCCGCCCTCC TCCTTGGAGCCCGGG  42 244
        hemE NONE
   TTMY_0817 NONE
   TTMY_0818 NONE
   TTMY_0819  691592 ..  691602 +  -8.2  -3.04144   TCCCAAGCCTTATTT                 CGGG CAA CCCG                 TGTTGCGAATCAACG  55 127
  L323_18290  693205 ..  693215 +  -8.2  -3.53012   CGTGGACGAAGCGGA                 GGGC GAA GCCC                 TTTCCCCGCCAGACC  62 170
   TTMY_0822  693571 ..  693599 +  -3.6  -2.73875   TGAGCCCACCCCCTC        CGTGGCCCAGGC CCTAA GCCGGGCCCGCC        TCCTCTTCGCCAACG  41 9
   TTMY_0823 NONE
   TTMY_0824  695386 ..  695399 +  -3.7  -2.71364   AGGCGGTGTAGACCC               GGCGG TACC CCGCG                TCCTTGGCCGCCTGC  40 120
   TTMY_0826  696997 ..  697020 + -15.2  -4.39828   CCCATCTGGTAGACT          GCCCCCGGGC TTCG GCCCGGGGGG           TTTTATGCGCGTGTT 100 41
   TTMY_0827  698035 ..  698078 +  -3.8  -3.19157   CTCGCCGCCGTCATG GGGGAAGCGGGGTGGCCCT GGCCCTA AAGGCC-TCCAGTTTTCCC TTCCTCGCCTTCCTC  45 103
   TTMY_0828  699496 ..  699519 +    -3  -3.05384   CATCACCGACTGGCT          GAAG-CTGGCC TAA GGCCAGGCCCC          TTCCCTCGGGAGGAA  42 13
   TTMY_0829 NONE
   TTMY_0830  701194 ..  701214 +  -9.7  -2.90813   GTGGGTGTGATCCTA            GAGGTGCAG GAC CTCCACCTC            TCCTTTAAAGGGGTG  56 31
   TTMY_0831 NONE
   TTMY_0832 NONE
   TTMY_0833 NONE
   TTMY_0834  705258 ..  705269 +  -7.2  -3.63744   CCTCAGGTAGGGGTT                GCGC TCCT GCGC                 TCTTTTGGCCCGGAG  61 432
   TTMY_0838  707937 ..  707968 +  -5.7  -3.29461   GGACGGGCCTAAGGC      CCCCCTCCTCCCC CACCCC GTAGAGGAGGGCG       TTCTGCCAGGCCTTG  51 233
   TTMY_0840 NONE
   TTMY_0841  710845 ..  710867 + -17.7  -2.97475   CTAGGGCCCGAGGGA           GGGCGGGGG GGAGG CCCCCGCCC           CTTTATCATGGAGGG  86 95
   TTMY_0842  711507 ..  711539 +    -7  -3.14051   CGCCTGGCCCGGATG     GGGGCAGCGTGAGGG CCCT CCTTCAC-CTCCTCC      TCTTCCTCGCCCTCC  52 14
   TTMY_0843 NONE
   TTMY_0844 NONE
   TTMY_0845  714204 ..  714245 +  -3.5  -3.53012   GGCGGCCCGCAAGCC CCTCGGCGAAGGCCCT-GAG GTC CTCCAGGGCCTCCTCCACGC TTTGGCGGAGCAAGA  50 41
   TTMY_0852  719190 ..  719210 +  -8.3  -3.53012   ACCTCGGGCCTCGCC            CCCCTTC GCCCCAG GAAGGGG            TTTCCCGGGGCGGGC  62 497
   TTMY_0860  730347 ..  730388 + -10.7  -3.03159   CGAAGAGCTTGTCCT CC-CCCTCCTCCCCGGCGCG GGT CAGGGCGCGGAGGAGGGTGG TCTTGCCGGCATTGG  60 456
   TTMY_0862  732355 ..  732377 + -11.2  -3.44051   CCCGCTTGAGCTCCC           CTTCCGCCTC CTT GAGGCGGGCG           TTCTCCTCCTCCAGG  66 246
   TTMY_0867 NONE
   TTMY_0868 NONE
   TTMY_0869  737388 ..  737398 +  -6.8  -3.61398   AGTTCCCCGCCGTGA                 GGAC CCC GTCC                 TTCTTGAAGGCGGGC  59 494
   TTMY_0871  739597 ..  739618 + -17.3  -3.04122   GGGCTTTGTGAGAAA           GGCCACCCC CAGG GGGGTGGCC            TCCTTTATAGTGGGA  82 49
   TTMY_0872  740281 ..  740302 + -18.7  -3.62597   CCATGGCCTTCGGCC           GGGGGGGCC TACG GGCCCCCCC            TTCTTCGGCGATAAG  95 44
   TTMY_0880 NONE
   TTMY_0881 NONE
   TTMY_0882 NONE
   TTMY_0883  746840 ..  746867 +   -17  -2.64155   GGACATCCCCGGGTC        CCCCATGCCGGC CTTG GCCAGCATGGGG         TCGCTTTAAAGCCCC  80 59
   TTMY_0886  748668 ..  748686 +    -3  -3.29471   GTCCCCGAAGATCTT             GTGGGTCT CCC AGACCACC             TTCATCTCCTCGCGG  47 363
   TTMY_0891  753567 ..  753577 +  -6.8  -2.62184   CCACGAGGTGGAGGG                 GGAG GAG CTCC                 TCGTCTAGCCCCCCG  47 7
   TTMY_0892  754999 ..  755014 +  -3.2  -2.73875   TACCTGGCCCTGGCG              GGCC TCCTCACC GGCC               TCCTCTTGGGGCCGA  40 157
   TTMY_0894 NONE
   TTMY_0895  755957 ..  755974 +  -2.5  -3.28712   TCCAGCCGGATCAGG             GCCGAGG TGTA CCAGGGC              TTCTCGGGGCGGCGC  45 110
   TTMY_0897 NONE
   TTMY_0898 NONE
   TTMY_0899  759997 ..  760023 + -19.4  -3.85817   GAGGCCGGCCTCAGA         GCCCCCGCCGCG CCC TGCGGTGGGGGC         TTTATACCACCCCAT 100 41
   TTMY_0903 NONE
   TTMY_0904 NONE
   TTMY_0905 NONE
   TTMY_0906  766135 ..  766147 +  -2.6  -3.05463   CCTTGACCCCGTGGC                GGGC CTGGA GCTC                TTCCATGAACCGCCT  41 450
  TSC_c07010 NONE
   TTMY_0909 NONE
   TTMY_0910  767893 ..  767920 +   -17  -3.58343   CGGGCTTTGATCCCA        CCCCATGCCGGC TTGC GCCGGAATGGGG         TTTAGCCCTCGTCAA  89 31
   TTMY_0922  777960 ..  777990 + -11.1  -3.62096   CCTCCTCGCCCTGGG      GGCC-C-TGGCCGCC GAG GGCGGCCTTGAGGCC      TTTCCCCTCCTCCCC  70 126
   TTMY_0923  778592 ..  778610 +  -8.1  -2.63631   AGCCCCCGGGAGCCC             TCGCCCC GGGCG GGGGTGA             TGGTGTAGCCCTTGG  50 226
   TTMY_0925  780298 ..  780310 +  -7.7  -2.80816   CTCCAGCAAGTTCCT                CCAGT GCG ACTGG                TATACTCCCTCCCAG  52 92
   TTMY_0926  781900 ..  781913 +  -5.2  -2.90075   GTGGGGGGCCGGGGT               GCGC TAATGT GCGC                TATACTTGACCAGGC  46 3
   TTMY_0927 NONE
   TTMY_0928  784096 ..  784110 +  -2.8  -2.78384   CCTCTAAGGCCAAGC               CCCT GCCCCAA AGGG               TATAATCCCACCCAA  40 34
   TTMY_0929  785261 ..  785272 +  -3.6  -3.28712   GAAGGGGGCCTCCTG                GTGG ACCG CCGC                 TTCTGAAGGGCCCCG  47 8
   TTMY_0930  786057 ..  786085 +  -3.8  -3.02511   CAGGCGCATGGAGAG       C-TTCATCCCCGC CTCG GCGGGGATCACCG        TCTTGGAGCCCTCCC  43 434
   TTMY_0934  790206 ..  790226 + -10.4  -4.14243   CATGGGGGCCCCAAA            GGGAGGGG GAGAA CTCCTCCC            TTTTGCCCTAAAGTG  78 62
   TTMY_0935  791731 ..  791780 +  -7.5  -4.13767   GAAGCCCGCCCTCTC CACCCCAAGGGAGGGGGAGGCCC TTTT GGACCTCTCCCGCCTCCGGGGCC TTTTGGCGTACGAGC  69 112
   TTMY_0936 NONE
   TTMY_0937 NONE
   TTMY_0938 NONE
   TTMY_0939  793907 ..  793922 +  -6.1  -2.52543   TTGGCCCTCCTCTAC              GAGGG GAAGGA CCCTC               TGGCTTGACCCGCAT  45 2
   TTMY_0940 NONE
        vapC NONE
   TTMY_0942 NONE
   TTMY_0943 NONE
   TTMY_0944 NONE
   TTMY_0945  798030 ..  798057 +   -14  -3.14211   TCATGGCTCAAGTAT        AAGGCCCCGGGG CGGT CCCCGGGGCCCC         TTGGTGGGCGCGAGT  73 423
   TTMY_0949 NONE
   TTMY_0950  800244 ..  800259 +  -3.2  -3.27298   CGAGGGCGAGGCCCA              GGGC GAGGGCGA GCCC               TTCCTGGTTCGGGCG  45 192
   TTMY_0956 NONE
   TTMY_0957 NONE
   TTMY_0958  805474 ..  805527 + -23.2  -3.05384   CCCGCGTCCACTCCA GGGTGGCCTTCCCCACCCCCTCGGGC AGGG GCTCG-GGGAG-GGGGTAGGCCACCC TTAGGTCCCAGGCCC 100 388
   TTMY_0960 NONE
   TTMY_0961  807191 ..  807206 + -11.8  -3.96705   CCCCCGGCACCAAAA              GGCCCC TCCG GGGGCC               TTTACCTTTTGTCCC  81 32
HMPREF0551_2240  810776 ..  810796 +  -3.8  -4.07568   CGGTAGAAGGGCTTG            ACCCGGGC GGCGA GGCCGGGC            TTTTCCGGCAGGACG  61 404
   TTMY_0976 NONE
   TTMY_0977  821832 ..  821850 +  -3.1  -3.24597   CTTGCCCTAGGATGG             GGGCA TATGCGGGT TGCCC             TCTTCATTGAGGGTT  46 66
   TTMY_0978  822016 ..  822032 +  -3.5  -3.80841   CGAACGCTCCTCCGC              CCCGGCC CTT GGCCCGC              TTTCCTCATCCTCCT  57 66
   TTMY_0979 NONE
  TNMX_01065  823446 ..  823485 + -12.9  -3.16039   GGACCCCCTCGGGGC  GCACCTCCACCACCTCCG CCTCC CAGAGGTAGTGGAGG-GC  TTCCTCCGGGTACTT  67 444
   TTMY_0983  823891 ..  823913 + -11.9  -4.07568   GCACGGCCCACCACA           CGCCCCGGC CTCGA GCCGGGGCC           TTTTGCGCCCAAGCC  82 29
   TTMY_1003 NONE
   TTMY_1004 NONE
   TTMY_1005 NONE
   TTMY_1006 NONE
   TTMY_1007  845160 ..  845172 +  -4.7  -4.11216   GAGAACCTCCCCCGC                GGGCC ACA GGCGC                TTTTCCGGGTAAAAG  63 436
        gltX NONE
   TTMY_1011 NONE
   TTMY_1012  849838 ..  849863 +  -3.2  -3.04144   GGCGCAAGCCAGCAT         GGGGTGGCATG AAAAC CCT-CCGCCCC         TCTTCCCAATAGAAG  42 93
   TTMY_1013  850631 ..  850676 +  -5.5  -3.53012   GAGCCTCCGGTCCAA G-GCCTCGAGCTC-CCGGAAGC GGCGG GCT-CGGGCGAGCTCCAGGCGC TTTAGGCGGAGGCGG  54 297
   TTMY_1015  851239 ..  851294 +  -3.7  -3.65522   CGATCTGGTAGAGGA CATCGGCCACGGGGCCCTTGTAGGG CACCAT CCCTTCAATGCCCTCGGGGACGAGC TTCTTGGCCTCGGTC  53 204
   TTMY_1017  853613 ..  853644 + -14.5  -3.31144   AGTAGCGGCGGGCTA      GGGCGAGGAAGGCG AGCCC CGCCTTCC-CGCTC      TTCTCGGGGTGGAAC  75 25
   TTMY_1024 NONE
   TTMY_1025 NONE
   TTMY_1026 NONE
   TTMY_1027  861622 ..  861634 +  -9.1  -3.76224   CAAGGGGAGGCCTCT                TGGCG GGT CGCCA                TTTCCTCCGTGGGGG  71 250
   TTMY_1028 NONE
   TTMY_1029  862370 ..  862386 + -11.5   -4.7173   GAAGGCCCCGGCCGC              GGCCGGG GCC TCCGGCC              TTTTTGGGTATAGTA 100 131
       fabHA  863383 ..  863405 +  -5.4  -3.01712   CCGTCCTCACCTGGG           GGGGGGCCTG ATG TACGCCGCCC           TCTTCCCCGGGCAGG  47 15
   TTMY_1031 NONE
   TTMY_1032  865056 ..  865066 +  -2.4  -4.18018   GGTCGTGCTAAAATC                 CCCC CGG GAGG                 TTTTCCATGACGGAG  62 41
   TTMY_1033  865352 ..  865376 + -10.6  -4.32046   GGGGCTTGCGACGCG          GATGGGGCGC GAAGG GCGCCCCGCC          TTTCCTTTTTCCCGG  93 62
   TTMY_1034 NONE
   TTMY_1035 NONE
   TTMY_1036  869375 ..  869397 +  -6.3  -3.17146   AGGTAGTTAACTACG           CCAACGG TGAAGGAAT CCGTTGG           TCTATTCTCACCAAC  51 386
   TTMY_1040 NONE
   TTMY_1041  875097 ..  875119 +    -4  -3.15544   TCGGCGCTTTCCGCC           GCCTTGCGGT AGT GCTCCAGGGC           TTCCTCCAGGTGGAG  47 264
   TTMY_1044  878483 ..  878519 + -18.2  -2.52543   GAGAGGTAAAAGACG   GGCTC-TCCGCTCTCCTC GGC GAGGAG-GCGGAGGAGCC   TCGGTTCCACGGGCT  78 410
   TTMY_1046 NONE
   TTMY_1047 NONE
   TTMY_1048  880637 ..  880649 +  -6.9   -4.4648   CTAAGCCCCCCGCGG                CGGGG CTT CCTCG                TTTTCTCATCCGCCT  77 37
   TTMY_1049 NONE
   TTMY_1050  882720 ..  882748 +  -2.4  -3.22396   CTCCTCTTCCTGGGA       GGGCGGCGGTGAGG TGG CTTC-CC-CTGCTC       CTTTTCCTCCTTCTT  44 14
   TTMY_1051  885196 ..  885208 +  -6.9  -3.34455   GCGCTTGGGAGGTCT                GCCGT GAA GCGGC                TTGGGTTTCTCCTCC  54 19
   TTMY_1052  886190 ..  886210 +  -3.1  -3.96148   TCCCCGTAGAATAGG            GGCATGCTC CAA GGGAAGGCC            TTTCTCGTCACCGGG  58 27
   TTMY_1053  887339 ..  887352 +  -3.7  -4.07568   GAAGGCCAGGTGGTG               GAGGC CGGG GCCCC                TTTTGGCGAGGAAGC  61 488
   TTMY_1066  896288 ..  896299 +  -7.2  -3.13403   GGCTGTTCACGAACC                CCCG CTCC CGGG                 TCTTGGTCCAGAGCA  52 358
   TTMY_1072  902388 ..  902408 +  -9.7  -2.52516   GGGGCAGGAGCATCT            GGGCGAG GGCCTGG CTCGCCC            CTTCCTCCTCCGCCA  53 301
   TTMY_1074  903762 ..  903776 +  -9.2  -3.31144   AACGCCGCCTACAAC               GCCTCC AAG GGGGGC               TTGTGAACCTCACCC  61 5
   TTMY_1076 NONE
   TTMY_1077 NONE
   TTMY_1078  908373 ..  908388 +  -4.6  -3.44051   GAGCCCGTCGGGGTA              GCCGGA GCCG TCCAGC               TTCTCGTGGTGCCAG  51 234
        trmB NONE
   TTMY_1089 NONE
Esi_0181_0037 NONE
   TTMY_1090  917464 ..  917478 +    -7  -4.07568   CAGCAACCCCCTACC               CCCCGC AGC GCGGGA               TTTTGAAAACCCAAA  67 68
   TTMY_1092  917619 ..  917629 +  -6.8  -3.53811   AGTAGGTCGGTGCGG                 GGGA TTT TCCC                 TTTCGCGGGAGTAGC  58 22
   TTMY_1093  917712 ..  917748 + -16.6  -4.57569   GTCTCCCGCTCCATC    CCTAAACCCCCCAGGG AGTCC CCCTGGGGGGTTTCGC    TTTTTCCCCGGCTGG 100 29
   TTMY_1094 NONE
   TTMY_1096 NONE
   TTMY_1097 NONE
   TTMY_1098 NONE
   TTMY_1099 NONE
        lytB NONE
   TTMY_1101 NONE
   TTMY_1102  923631 ..  923649 +  -5.2  -4.13945   GCCCGGTGGTGCGCG             GGGTCC AAGGCGA GGGCCC             TTTTGAAGTGCGCCT  64 245
   TTMY_1109 NONE
   TTMY_1110  930967 ..  930984 +  -8.3  -3.21924   CGGCCCCTGGACGAG             CGTGCGG GAAG CCGCCCG              TCTTATGGCCCATCG  56 91
   TTMY_1114 NONE
   TTMY_1115 NONE
   TTMY_1116  935856 ..  935873 +  -2.5  -3.15579   CCCCTCATCCTCCTC             TCCCCCC TGGC GGGGGCC              TTGGTGGACCGTTAC  44 94
   TTMY_1118 NONE
   TTMY_1119 NONE
    TTHA0036  939828 ..  939857 +  -4.7  -3.54424   TCTGTTTTGGCCGAG       GCCCTGAGCGACC TCGG GGCCTCCCTGGGC        TTTAGCACCCTCGCC  52 45
   TTMY_1121 NONE
TaqDRAFT_4925 NONE
    TTHA0038  942216 ..  942239 +  -3.9  -3.35832   AGAGTAGGAATCTTG          GACAAAGAG AACCTA CTCTTTCTC           GTTTTTGGCCCGTTT  49 34
   TTMY_1124 NONE
   TTMY_1125 NONE
   TTMY_1126  944829 ..  944856 +  -4.2  -2.78384   TCCGGATGGCGGACG        TGGACCTC GAGGCCCCGGAG GAGGTCCA         TCTCCTCCGGGGAGG  42 275
   TTMY_1129  946521 ..  946540 +  -3.4  -3.78934   AGCCCATGGCGCTGA            GCTTGGCC TCGA GGTCGTGC             TTCTTCTGCAGGAAG  56 407
   TTMY_1134 NONE
   TTMY_1135  952661 ..  952683 + -14.1  -3.29263   CGTTGTAGAAGACGA           GGTCCGGGC GGAAG GCCCGGGCC           TTCTCCAGGGCCTCT  75 222
   TTMY_1137  954347 ..  954374 +  -6.9  -4.10657   GGGCCACCCCAAGGC        CGCCGCGGTGCG GGCGG CGTTCC-CGGCG        TTTTGGGGGATCTCC  67 393
   TTMY_1140 NONE
   TTMY_1141 NONE
        hrcA NONE
   TTMY_1143 NONE
   TTMY_1144  959923 ..  959976 +  -5.7  -3.64703   AAGGGGGTGGGGGGC GGCACCTCGTCCCAGAGGAGCCGGGC CCC GGCCACCTCGCCGGGGAGGAGG-GCC TTTAGGTCCAGGGCG  57 214
   TTMY_1149 NONE
   TTMY_1150 NONE
   TTMY_1151  965842 ..  965875 + -17.5  -2.70932   CCAGACCAGGGCAAG     CCGG-GCCTCCAGGTG GCC CACCTCGAGGCCCCGG     TGGTTGCGCACGGGG  80 205
   TTMY_1154 NONE
   TTMY_1155 NONE
   TTMY_1156  969327 ..  969340 +  -5.9  -4.39277   GGCGCGAAGCATAAT               GGGGT ATGC GCCCC                TTTGTTCTCCTCTTC  73 143
        vanW  970831 ..  970872 +  -7.1  -3.66732   TCCTCCCAGTCCTTA GGGGGGG-CGAGGGGGGG CTTGCCC CTCCCCCGGGACCGCCCC TTCTTGGCCTCCTTG  61 409
   TTMY_1159 NONE
   TTMY_1160  976223 ..  976246 + -17.4  -2.64416   CCCCAAAAAGCGCTC          GGGCCGGGTC CAAA GGCCCGGCCC           CTTATACTGGCCCTG  80 76
   TTMY_1161 NONE
   TTMY_1162  978023 ..  978043 +    -6  -4.36914   CACCAGCCTTGGCTC            GGGGACCG GGTAG TGGACCCC            TTTTCTGCGGAAGAA  72 385
   TTMY_1168 NONE
   TTMY_1169 NONE
   TTMY_1170  981886 ..  981898 + -10.5   -3.5394   CGGGAAATGAGGCCG                GCCCC TAT GGGGC                TTTGGGGACCGGTTT  67 123
   TTMY_1171 NONE
   TTMY_1172 NONE
   TTMY_1173 NONE
   TTMY_1174 NONE
   TTMY_1175 NONE
   TTMY_1176 NONE
   TTMY_1177 NONE
   TTMY_1178 NONE
   TTMY_1179 NONE
   TTMY_1180 NONE
   TTMY_1181 NONE
   TTMY_1182 NONE
   TTMY_1183 NONE
   TTMY_1184 NONE
   TTMY_1185 NONE
   TTMY_1186 NONE
        argS  997659 ..  997674 +    -6  -3.44051   CGCCTGAGGTAATGT              AGGCCC ATGC GGGCCC               TTCTCCTCCTAGCCC  55 24
   TTMY_1188 NONE
   TTMY_1189 1000237 .. 1000256 +  -4.3  -3.79906   CTCTGACGAGCATCC            CCTCGAGG AGGAG CCT-GAGG            TTCTTCTCCAGCTCC  58 35
   TTMY_1196 1004953 .. 1004964 +  -5.8  -4.08945   GCCCGGTGAGGACCA                CCAC CGGC GTGG                 TTTTCCCGAGCTCCT  65 113
   TTMY_1203 1008100 .. 1008127 + -24.2  -2.73364   AGGCCCTTTTGGAGC        CCCCACCGCGGC GAAA GCCGCGGTGGGG         TGCTTAAGCTCACGG 100 295
   TTMY_1204 1008777 .. 1008789 +  -6.2  -5.02074   CGTCCCCGGGTTCAC                GGCG AGCCC CGCC                TTTTTTCCCAGCTCC  87 385
   TTMY_1208 1011748 .. 1011777 + -11.3   -5.0133   GCACCAGGACGCAAT       CCTCCCGCCCACG GAAG CGTGGGCGGGGCC        TTTTTTACCCCCATG 100 43
  RLTM_01805 1014288 .. 1014309 +  -4.3  -4.09685   AAAAGTGGCCTTGCG           GGGGCTCCA GGTT TGGAGCAAC            TTTTGCAGGGTGGCC  63 218
  RLTM_01800 1017729 .. 1017750 +    -8   -2.5955   TACCAGGGATCCCGA           CCC-CCTGG GTACA CCAGGAGGG           TGACTTCTACCCCCT  48 403
  RLTM_01795 1020590 .. 1020619 +  -2.7  -2.78384   ACAGGGCCTTGGGGG       GCTTCTGGAGCGG GGCT TCGCCCTAGAGGA        TCTGGTGGCGGAGAA  40 0
  RLTM_01795 1021456 .. 1021468 +  -9.1  -3.77196   GCCCCGTCCAGCTGG                GGCAC CAC GTGCC                TTTCCTGGGTAATCA  67 318
   TTMY_1231 NONE
  RLTM_01700 NONE
   TTMY_1238 NONE
   TTMY_1239 1038816 .. 1038839 +  -7.4  -3.01712   CCAAAAGCTCCGCCG          CCA-CCCGGAG CAC CTCGGGGGTGG          TGTTGGCGAAGCGGA  52 437
   TTMY_1244 1042869 .. 1042883 +  -4.9  -3.38768   AGGTAGCCGATCATC               TCCCG GGCCA CGGGG               TTGTCGGTCATCTCG  49 389
   TTMY_1246 NONE
   TTMY_1247 NONE
TaqDRAFT_3053 NONE
  RLTM_01460 1045861 .. 1045886 + -11.8  -3.63805   AGAGCTCCGGGTCTA         GGCGGGGCCT GTCGTA AAGCCCCGCC          TTTAGCCTCTGCCGT  72 65
   TTMY_1255 1050323 .. 1050340 +  -3.3  -4.28361   TCAAGCCGAGCTCCA             CCGCCTT CTCC AGGGCGC              TTTTCGTGGCCTTGC  66 201
   TTMY_1258 NONE
        nrdR 1051902 .. 1051916 + -11.4  -3.68738   AGCATCTGCGTCCTG               CGCCCT TTT AGGGCG               TTGATTTGTTGGAGA  75 110
TaqDRAFT_3001 NONE
   TTMY_1260 1053487 .. 1053504 + -14.1   -5.4505   CTTCTCAGGTCCTCA             GGGCGCC CTTG GGCGCCC              TTTTTTGTTGCCGCA 100 72
   TTMY_1262 1054259 .. 1054272 +  -2.3  -4.15565   GGGCCGGGGCGGGGA               GAGCT CCAA AGCGC                TTTTGAGCTCCTGAA  60 290
   TTMY_1268 NONE
   TTMY_1269 1059281 .. 1059293 +  -2.6  -3.60792   TCCCAGAAGGCCCCT                GGGG TACTC CTCC                TTTAGCGCTTGCGCC  51 467
   TTMY_1271 1060893 .. 1060917 +  -2.6  -3.15544   CATGGCGTAGTCCCC          CGCCCGCTCC AGATC GGTGAGGGCC          TTGATCACGGTGAAG  44 414
   TTMY_1276 1065093 .. 1065119 +  -2.9  -2.70932   AAGCGCACCCGGGCC        CCGGGAAGGCGG TAAA CC-CCTTCCCCC         TCCTTGACCCCGCCC  39 311
    TTHA0154 NONE
 TtJL18_1875 NONE
        marR 1069774 .. 1069787 +  -6.7  -3.52204   AGAGGTCCTCCACGC               CCCTT CCTC AAGGG                TTCCTTTCGGGCTCC  58 44
   TTMY_1285 NONE
   TTMY_1286 NONE
   TTMY_1287 1074571 .. 1074602 +    -2  -3.85817   GCTGGGTCCCTGAGG      CTACATGCCGGCGT GGAG GCCCCGGCAAGGCG       TTTCTAAAGGCCAGT  54 28
   TTMY_1288 1075735 .. 1075766 +  -4.2  -3.64487   CGGCGATGGCGGTGT      TGAAGCGGAGGGCC TCGA GGTCCTCCGTGACC       TTCTTCAGGGTCTCG  55 416
   TTMY_1292 NONE
   TTMY_1293 1082266 .. 1082282 +  -2.1  -2.63073   GCCCAGGTGGCGGAC              CTCAAGG AGG CCTAGCG              ATGTTCTTCCGCAAG  38 11
   TTMY_1294 NONE
   TTMY_1295 1082828 .. 1082846 +  -8.8   -3.3197   GGTGCTCCGCCTGGT             GGACGCCA TCC TGGCCTCC             TTGTAGCCATGGTCT  58 1
   TTMY_1296 1083283 .. 1083310 +   -17  -2.80074   GAACGCCCGCCGGGG        CCCCATGCCGGC GTAA GCCAGCATGGGG         TGGTGTTATCAGGAG  80 55
   TTMY_1302 NONE
   TTMY_1303 NONE
   TTMY_1304 1087506 .. 1087533 + -24.2  -2.70932   AGCTCCTTTTGGGGC        CCCCACCGCGGC GAAA GCCGCGGTGGGG         TCCTTAGCGCCAGAC 100 56
   TTMY_1313 NONE
   TTMY_1314 1094736 .. 1094746 +  -2.4  -2.89564   GGGTGGTGGGGTATG                 GGGC CTT GGCC                 TATGTAGGATGAAGG  40 3
   TTMY_1315 NONE
   TTMY_1317 1096036 .. 1096054 +  -3.1  -3.70438   CAGGCCCTGGGCCCC             GCTGATG ACCTG CATCACC             TTTCCCTGGTACTTT  53 208
   TTMY_1319 NONE
   TTMY_1320 1099674 .. 1099695 + -11.5  -2.57132   CTCCCCCCTCCGCCT           CCCCGGGGT AAAG GCCCTGGGG            CTTCTGGACGACCCC  61 15
   TTMY_1321 NONE
   TTMY_1322 1102150 .. 1102162 +  -3.3  -3.15544   CGGCCCCGGTAAAGG                GTCCT CAA GGGGC                TTCCTCGGGCTAGCC  44 61
   TTMY_1323 NONE
   TTMY_1324 NONE
   TTMY_1325 NONE
   TTMY_1326 NONE
   TTMY_1327 NONE
        baeS NONE
   TTMY_1329 NONE
   TTMY_1330 1108509 .. 1108520 +  -3.6  -2.98823   GGGTCTGGAAGTTCC                CGTG AGGG CGCG                 TCTCTGTCCAAAGCC  44 21
    TT_C1364 NONE
    TT_C1365 1109437 .. 1109465 +  -4.5  -2.87132   CAGGCAAGGGGATGG       CCTCCGCCCGCC CGGAAA GGAGGGT-GAGG        TCTATCCCCAAGGCC  44 393
    TT_C1367 NONE
   TTMY_1336 1110691 .. 1110725 + -11.5  -3.33696   CGAGTGAGCCCCGAA     GCCCCAGACGG CAGAACCTTGGAC CCGTCTGGGGC     TTCCTTCGCCCGAAG  68 34
   TTMY_1337 1111315 .. 1111343 + -14.5  -2.60075   GGCGGCGGGCAGTCT        GGTCCTGGGCCTG GCC CGGGCCCAAGGCC        CTTCCTTCCCCGAGC  68 113
   TTMY_1339 1112702 .. 1112718 +  -7.9  -3.00476   GGACCTTCCACCCCC              CCCCTCC TGG GGAAGGG              TATATGCTTGGAAAT  53 64
   TTMY_1340 NONE
   TTMY_1341 1116009 .. 1116027 +  -2.3  -2.78596   CTCCTAAGGATAGAG             GCCAAGT ACCGG GCCTGGC             TATAATGGACCAATG  38 2
   TTMY_1342 NONE
   TTMY_1343 NONE
   TTMY_1344 1117807 .. 1117835 +  -3.8  -4.30416   CATGGCGTAGGGAAA       GCCCCG-GTAG AACTCCCG CTTCACGGGGC        TTTTCGCTTCCTCCT  66 466
   TTMY_1348 1120649 .. 1120665 +  -6.5  -3.65827   CCTCCCCCAGGGCCG              CCGGG AAGAAGA CCCGG              TTTCCCTCCACCTTC  59 458
   TTMY_1354 NONE
   TTMY_1355 1125442 .. 1125457 +  -6.8  -3.15544   GCGCGCCCGGAAGGA              GGAGGT CAAG GCCTCC               TTGATCCAGGTGAGG  51 254
   TTMY_1366 NONE
   TTMY_1367 NONE
   TTMY_1368 NONE
   TTMY_1369 NONE
   TTMY_1370 1136384 .. 1136394 +  -8.2  -3.09327   GCCCGGCGAGGCCCA                 CCCG GGG CGGG                 TCTTGCATCACCTCA  54 234
   TTMY_1386 1151610 .. 1151637 + -24.2  -2.70932   AGGTCCTTTTGGGGC        CCCCACCGCGGC GAAA GCCGCGGTGGGG         TACTTAAGCCCGCCC 100 92
  RLTM_09838 1155113 .. 1155141 + -12.3  -4.08216   TCTGGCCCGCGGTGG        GCCGGGGGCGGAG GTC CTCCTCCTCCAGC        TTTTCCAGGAGGTGC  80 211
   TTMY_1400 1159932 .. 1159957 +   -14  -3.67175   ACCAGAACGCAAAAA         CCCCCGCCTT ACTCTC AGGGCGGGGG          TTGCTTTTGACCAAT  80 42
   TTMY_1401 1160870 .. 1160915 + -10.3  -3.23452   TGGGCGGGGACGATG GCCACGTGAAGCCCGTGCGGG TCTT CCCTGACGAACTTCACGTGAC TTCCCTTCTAGGAGT  62 208
   TTMY_1404 1161691 .. 1161705 +  -3.4  -3.61398   GCTGGGCCTTTTCCA               CCTCGG CCG CAGGGG               TTCTTGAAAACGAAG  49 137
 CTHBC1_2213 1162545 .. 1162569 +  -7.7  -4.11692   CAGGTCTTCGGGAGG          GGGTGGGTGCG CCG CGTGGCCGCCC          TTTTGACCGTACCTA  69 272
   Rxyl_2288 1163226 .. 1163239 +  -3.7  -4.11692   GTGGAAAGCCTTATG               GCCCG CGCC CTGGC                TTTTGACCGTACCTA  61 6
   TTMY_1410 1168440 .. 1168467 + -10.6  -4.59773   GTTTTGGTTTCCTGG        GAGGATGAG-GCG GTT CGCCCTCCTCCTC        TTTTTCGGCCTCGCC 100 257
   TTMY_1411 1169935 .. 1169956 +  -3.7  -3.87815   TTTACGAAGGAAGCC           CCTTCTG GGCCTTTG CAGAGGG            TTTATGCCGCTAGAC  57 53
   TTMY_1412 NONE
   TTMY_1413 NONE
   TTMY_1414 1174531 .. 1174546 +  -3.2  -2.72461   CATCAGAAACCCCTT              CACCTG TCGC CAGATG               CTTTCCACAGGGTTC  40 70
  RLTM_10353 1175801 .. 1175816 +  -4.6  -3.56099   CTTGGCCCTTGCCCT              CGCCCT CCTC GGGGTG               TTTCACCCGCTTCTC  51 129
   TTMY_1419 NONE
HMPREF9710_00535 1177096 .. 1177147 +  -6.5  -3.36749   GTCGTAGACGGTGAG GGCGGCGACGGCGCAGGCGGTCATGG CCT CCATCTCCACC--C-CCGTCTCCGCC TTGGTCTTCACCGTG  53 183
   TTMY_1424 NONE
   TTMY_1425 1179669 .. 1179682 +  -3.7  -3.05963   GTCCCCCTCCGCCTC               CCCCG GCTT CGGCG                TCTTGCCGTGGCGGT  43 223
   TTMY_1427 1180444 .. 1180487 +  -2.2   -4.3129   CGCCGGGAGGCCCAG GAAG-CGCTCCGTGGCCCTGG CCG CCTGGGGCGAGGAGGGGCTTG TTTTGGTCCTCCGTC  65 93
   TTMY_1428 1180862 .. 1180874 +  -3.3  -2.64595   CCCTAGAAAGGACAC                CATGG AAA CCCTG                CTTCTCGTACGGCTT  39 35
   TTMY_1429 NONE
        thiI NONE
   TTMY_1431 1183533 .. 1183562 +  -6.9  -3.01712   CCGCCAGGGTGCTCC       CCCCGGCGAGGAG GAGC CACTCCTCCGGGG        TCTTGGCCAAAGGGG  49 185
   TTMY_1434 1186390 .. 1186421 +  -5.6  -2.70932   ACCCCATCAGCGCCA      GAAGCCGCGCGTGC CCCC GCACCCGCCGCACC       TCCTTCCCCCGGCGG  45 182
   TTMY_1436 1186585 .. 1186609 + -17.1   -4.2803   CGCAACCAGAACCAA          GCCCCGGACAC CCT GGGTCCGGGGC          TTTTCCCTTACCCTA 100 35
   TTMY_1437 NONE
   TTMY_1438 NONE
   TTMY_1439 NONE
        mutM NONE
   TTMY_1456 NONE
   TTMY_1457 1209918 .. 1209934 +  -9.4  -3.55444   TTTCCGGGACTTCCG              GGAGGC GTTAG GCCTCC              TTTAGGGCGTAGCGG  64 4
   TTMY_1460 NONE
   TTMY_1461 1213203 .. 1213249 +  -4.2  -3.29461   AGTAGAGGTAGGGGC GGCCCTTTTCGTCCTGGCGCAC CGG GTTCAAGACGGCGAGGAGGGCC TTCTGCCCGGGGTTG  49 114
   TTMY_1466 NONE
   TTMY_1467 NONE
   TTMY_1468 NONE
   TTMY_1469 NONE
   TTMY_1470 NONE
   TTMY_1471 1222856 .. 1222875 + -16.4  -5.00616   GCGGTGTGCAAAAAA            GGCCGGGG CACG CCCCGGCC             TTTTTTGCACCGGCC 100 45
   TTMY_1472 1224085 .. 1224105 +  -5.3  -3.67597   GAGGCCCCGCGGGAG            CTCCACCGC CTC GCCCTGGAG            TTCTTCCCTCCGGAG  57 39
   TTMY_1473 NONE
   TTMY_1474 NONE
   TTMY_1475 1227915 .. 1227937 + -20.6  -5.00616   TAAAGGCCGAGCCTT           GGGGGAGGCC CAG GGCCTCCCCC           TTTTTTCGGGAGGAA 100 38
   TTMY_1476 NONE
   TTMY_1477 1229632 .. 1229652 + -14.7  -4.56775   CCCGGGCCAACGCCA            CCCCCTCCT TCA GGGAGGGGG            TTTTTCCCGCGGCGT 100 102
   TTMY_1484 1234739 .. 1234756 +  -7.7  -2.78596   AGCCTTCCACCGGCT             TCTGACC GGCG GGTCAGG              TATAGTGGGGGCATG  51 230
   TTMY_1485 1236460 .. 1236476 +  -2.1  -3.55444   CATGACCTCCCCCTG              ACCGAGG GGG CCTAGGC              TTTGGAGGATGCGGG  48 25
   TTMY_1486 1237408 .. 1237426 +  -2.2  -2.93853   GAAGTCCGCCCCCAC             CACCTCCG CCT CGGGGGCC             CTTTCCTTGAGGAGG  40 496
   TTMY_1488 1239220 .. 1239232 +  -5.5  -2.72511   TGAAGCAGTCCCTCC                CCTAC TCC GTGGG                CTTTGACGGGATCGC  45 38
   TTMY_1489 NONE
   TTMY_1490 1240880 .. 1240890 +  -8.2  -3.31144   GGCCCAGGAAGTGGG                 GGGC CTG GCCC                 TTGTCCACCTCCCGG  58 506
   TTMY_1497 1244051 .. 1244068 +  -8.4  -3.28712   TTGAAGGCGAGCTTG             GAGGCG CTTTTC CGCCTC              TTCTAGGGAGGGAAG  58 85
   TTMY_1498 1244309 .. 1244324 +  -6.1  -4.56597   CGAGGCCCGAGCCTG              GGCCT CCTCCA AGGCC               TTTTTAGGGGGCACG  77 49
   TTMY_1501 NONE
   TTMY_1502 1247526 .. 1247543 +  -6.9  -3.53012   AGGTGGGCGTCCAGG             GGAAGGG CGAG CCCCTCC              TTTGCGAGGCGGGGC  56 194
   TTMY_1512 NONE
   TTMY_1515 1258075 .. 1258102 +    -4  -3.34013   CCCGGCTTCCCAGCG        GC-GCCCGGACCG AGG CGCTTAGGGCTGC        TTCCTTCCGGACCTG  47 4
   TTMY_1516 NONE
   TTMY_1517 NONE
   TTMY_1518 1259838 .. 1259865 +    -4  -3.05384   GCCCGGCCTCCAGCA        GGGGGGTCCCGTC CAG GA-GGAGCCGCCC        TTCCCTCAAGGAGAG  45 48
   TTMY_1520 1261939 .. 1261964 +  -9.6  -2.59564   TCTTCCGCTTCCGCC         GCCCCCCGGG GACGGG CTCGGGGGCC          CTTATGCCCTGGAGG  54 57
   TTMY_1523 1269305 .. 1269316 +  -5.8  -2.87468   AGTGAGGCTTGGCCT                TCCC GCCG GGGA                 TGTGGTATGATCCCC  46 36
   TTMY_1524 1269416 .. 1269454 + -20.2  -4.16943   CTTCACGGCCCGCCA   GGCTTTCCCCCTGGGCCC TTG GGGCCCAGGGGGTTAGGC   TTTTAGCGTATGACG 100 27
   TTMY_1525 1270490 .. 1270506 + -15.1  -4.07568   GGCCCCCAAGGGGCA              GGCCCCG CAA CGGGGCC              TTTTCGGCAGGCAGA  89 353
   TTMY_1541 NONE
   TTMY_1542 1281679 .. 1281698 +    -5  -3.61089   CCACCATCCGGTCCA            GCTCGGGGA GCA TCTCC-AGC            TTGTACTTCTTGCGC  55 378
   TTMY_1552 NONE
   TTMY_1553 1290329 .. 1290349 +  -7.5  -3.59315   GGAGAAGGGCCAAAA            GCTGCAGGG GGG CCATGTAGC            TTTGCGCCTCCTTGA  61 268
   TTMY_1556 1292524 .. 1292539 +  -7.5  -3.80573   TCCGGGGAGGATGAA              GCCCC GGAAGG GGGGC               TTTCCTCCTGGTAGC  66 250
   TTMY_1560 1293505 .. 1293532 + -22.8  -2.72991   AGGCCCTTTTGGGGC        CCCCGCTCTGGC GCAA GCCAGAGCGGGG         TACTTAGCCCTGTCC  90 271
   TTMY_1562 NONE
   TTMY_1563 NONE
 MC7420_3051 NONE
   TTMY_1565 1297500 .. 1297528 + -11.5  -3.53012   GGTCCTGGAAGAGGC        CCGCGAGGCGGGC TAG GCCCGCACCGGGG        TTTCGCCACCGGGAA  72 10
   TTMY_1574 1305601 .. 1305613 +  -3.4  -3.47227   CGCCGTATCCGAGGC                GCTT AGGCC AAGC                TTCTCCTCCTTCCGG  50 525
   TTMY_1578 1308901 .. 1308922 +  -9.4  -4.21768   CAGCTGGGCCAGCTT           GGCCTTGG CCTCCT CCAGGGCC            TTTTCCGCTTCCTTC  80 198
   TTMY_1582 1310469 .. 1310496 +  -7.6  -3.75024   GGCTGGAGCCCGCCC        GGGAGCGGTGATG CGC CG-CGCCGCCCCC        TTCTTCATCCTCCCC  63 15
   TTMY_1583 NONE
        mazG 1311536 .. 1311554 +    -8  -2.57132   GCCCGGCTTCCGCCT             GGCCGCGG TGG CCGTGCCC             CTTCTGGGGGAGCAC  50 48
   TTMY_1585 NONE
  TNMX_10465 1312428 .. 1312480 + -20.5  -2.73364   GGAGGACGCCCGCCT CCCTCAGGGCCGCCACCTCCTCC GGGGTGA GGTGGGGGAGGCGGCTTTGGGGG TCCTTGGGGTCCCGG  86 169
   TTMY_1592 NONE
   TTMY_1593 NONE
   TTMY_1594 1315860 .. 1315898 +  -2.2  -2.76162   GGGCGGAGGCTTCAC  GAGGCGGACCGG-GAGG AATAGC CCTAGCCAGGCCGCCCC   CTTTGGGGTAGGGTA  38 5
   TTMY_1595 NONE
   TTMY_1596 1318874 .. 1318906 + -13.3  -2.57931   GGCCCCGAGAACCCA      CACCCCCTCCTCCAG GGG CCCGAGGAGGGGGCG      GTTCTCGGGGGTGCG  62 199
   TTMY_1599 NONE
   TTMY_1600 NONE
   TTMY_1601 NONE
   TTMY_1602 1324512 .. 1324526 +  -5.6  -3.02263   CCCGGATCCGGTCTA               TGGCCT CGA GGGCCG               TGTTCACCGCGGTGT  47 520
   TTMY_1607 1327688 .. 1327701 +  -2.3  -2.71712   GCGGGTGGAAGCCCT               GGGAA AGGT TGCCC                CTTTGCCCCAAGCGC  38 96
   TTMY_1608 1327890 .. 1327903 +  -3.7  -3.04144   CTCCGCCCCTACCTC               CGGCC ATGA GGCCC                TCTTGGACCTGGGGG  44 17
   TTMY_1609 1330187 .. 1330205 + -11.6  -2.62263   TCCAGCATGAGGAGG             GCCCGGGC GTG GCCCGGGG             TGATCTCCCCCCGCT  59 284
   TTMY_1614 1335463 .. 1335492 + -10.9  -3.28712   CCAGGGGGGCCGACC       CCTGTGGATAA CCCGCCCT TTATCCACAGG        TTATCCACAGGCCGG  66 123
   TTMY_1615 1336780 .. 1336798 +  -6.6  -2.62184   CGGGCGGTGGTGGTG             CCCCTCAG GGT CTAGGGGG             TAGTATGGGGCGGGG  46 11
   TTMY_1616 NONE
   TTMY_1617 1339938 .. 1339951 +  -5.2  -3.14132   GGGAGCACTCCCTGG               GGCC GGAAGG GGCC                TTGGTAGCGGAGAAG  49 437
   TTMY_1619 1340904 .. 1340921 +  -3.3  -3.53012   CCTGCGGGTGGGCGA             GG-ACCGG CAC CCGGAACC             TTTCCCAAAGGGCCC  50 357
   TTMY_1624 NONE
   TTMY_1625 NONE
Esi_0181_0037 NONE
   TTMY_1626 1348211 .. 1348225 +    -7  -4.07568   CAGCAACCCCCTACC               CCCCGC AGC GCGGGA               TTTTGAAAACCCAAA  67 68
   TTMY_1628 1348366 .. 1348376 +  -6.8  -3.53811   AGTAGGTCGGTGCGG                 GGGA TTT TCCC                 TTTCGCGGGAGTAGC  58 22
   TTMY_1629 1348466 .. 1348490 + -14.3  -4.21402   GCTCCAATCCCCTAA          CCCCCCAGG ACACAAA CCTGGGGGG          TTTATCCTTTTAGAT  91 36
   TTMY_1639 1358898 .. 1358910 +  -5.5  -2.85351   ATCGCCGTGGAATGG                CTTCC AAA GGAGG                TGTGGTATGCAAAGG  46 87
   TTMY_1640 1360218 .. 1360243 + -21.9  -3.14132   CTAGCCCCTTGCCTT         CCCGGGGAGGC CCAG GCCTCCCCGGG          TTCATCCCAAGGCCA 100 37
   TTMY_1641 NONE
   TTMY_1642 1361974 .. 1361991 +  -9.1  -3.28712   CGGTGAAGGGCTAGG             GGCTCTC AGGC GAGGGCC              TTGTGGAGGAGGGCG  61 27
   TTMY_1645 1365633 .. 1365650 +  -6.2  -3.33492   AAGCCGTAATAGCAT             GGGGGG TGTTGC CCCTCC              TTCTCGCCTGGCTCC  53 123
   TTMY_1646 1367077 .. 1367104 +  -2.7  -5.00616   CCCGGGAAAGCCTGC       GCCTCAGGTAGGG GTTG CGCT-CCTG-GGC        TTTTTTGGCCCGGAG  81 328
   TTMY_1648 1369128 .. 1369138 +  -4.6  -3.54424   GCCACCCGCTTCCCG                 GGGC CGA GCTC                 TTTGGCCACCTGGAG  51 458
   TTMY_1651 1370543 .. 1370562 + -16.4  -4.50976   CGCGGAAAGGGCAGG            GCCCCGGC TTCC GCCGGGGC             TTTTGTAGTATGGGG 100 44
   TTMY_1652 1371504 .. 1371516 +  -6.2  -2.78463   TTTACTGGAGTTTTG                CCCC TCCGT GGGG                TATAGTGAGGGCGAT  47 42
   TTMY_1653 NONE
   TTMY_1654 1373406 .. 1373429 +  -9.5  -3.78775   TTAGGGCCCCCTTTA          GGGCCTCGG CCATCC CCAAGGCCC           TTTCCTGGTAGACCC  70 261
   TTMY_1658 NONE
   TTMY_1659 1377773 .. 1377789 +  -2.1  -4.12188   CTTCGCCGCGGTGGG              GGCCCGG GGA TTGTGCC              TTTTACCCCTGATAC  58 55
   TTMY_1660 1378311 .. 1378334 +  -6.6  -3.21099   GCCTTGCCTCCGGCG          CGCTCCTGGG CCTC CTCGGGGGTG           TTGGTGGTGAGGACG  51 100
   TTMY_1662 NONE
   TTMY_1663 1379494 .. 1379504 +  -8.2  -3.58269   GGACGGGCTCCCTTT                 CCCC CTC GGGG                 TTTGGGGCTACCTTG  62 88
   TTMY_1664 NONE
   TTMY_1665 1380610 .. 1380633 + -10.2  -3.05844   CGGGGTAGACCTCCT          TCGCCGGCCT CCTC AGCCCGGCGG           TGTTCACGTCCAGGA  57 207
   TTMY_1669 1383332 .. 1383355 + -13.8  -2.71712   GCCTGGGCCTCCGCC          CCGCCTCGGG GTAG CCCTAGGCGG           CTTTCGCCGCGGCGG  69 12
   TTMY_1670 1384424 .. 1384434 +  -6.8  -4.14243   CCGGGCCCTTTCCCG                 GCTC GCC GAGC                 TTTTGGGGTAGCATG  67 4
   TTMY_1671 NONE
   TTMY_1672 NONE
   TTMY_1673 NONE
   TTMY_1674 1387376 .. 1387400 +  -2.1  -3.53012   GGTTGCGCTAGAATA         GCAAGGATGG TCTACC CCATCCG-GC          TTTACGGAGACCCCG  48 25
   TTMY_1675 NONE
   TTMY_1676 1388909 .. 1388938 +  -9.2  -4.37092   CGTCCTCACGGGCCT       CTCCGGGGCG-GG CAAGA CCACGGCCCGGGG       TTTTCTGGAGGACCT  78 60
   TTMY_1678 NONE
   TTMY_1679 1391143 .. 1391171 +  -6.6  -3.62046   GGCCCTGGTCTACCT       GGACCT-CGCCCC AGGG GGGGAGGAGGCCC        TTCTTCCCGGCCTCC  56 258
   TTMY_1680 1391646 .. 1391660 +  -4.2  -4.66609   TCGGAGGTAGTCCAG               GTCTTG GCG CAGGGC               TTTTTCCGTGGCCTC  77 50
   TTMY_1684 1394609 .. 1394622 +  -5.9  -3.60627   TAAGTACGACATCCT               CCGGG GGTT TCCGG                TTTCAACTGCCATAA  56 414
MAXJ12_18043 NONE
   TTMY_1686 NONE
   TTMY_1689 NONE
   TTMY_1690 NONE
   TTMY_1691 1399860 .. 1399878 +  -2.4   -2.8511   TAAAGGATTTCGGGC             ATTTGTGG AAA TCACAAAG             TATACTCCTCTCCTA  40 118
  TNMX_12845 NONE
  TNMX_12845 1401187 .. 1401227 + -13.2  -3.09635   CAAGCCAAAGGAAAA  GGGGGCGCTTGGTGAGCT GTGGA AGAACACCAGACGCCCCC  TTCCATCCTACCCCT  72 134
  TNMX_11345 1401852 .. 1401865 +  -8.1  -2.82516   GCACCAGACCTTGCG               CCTCC CTGA GGAGG                TCTCGTGATCCAGCC  52 310
   TTMY_1696 1403681 .. 1403701 +  -3.1   -3.1355   GGTGAAGTCGGTGTA            CAAGAGCTC AAA GGGCTCCGG            TTCCCTCTGCCTGAG  44 195
   TTMY_1700 1405141 .. 1405182 +  -2.1  -2.90075   GTAGGAGGGGTGGAG GGGAAGCTTAGGTCCTCCTC CTG GTGGAGGGCCGGAG-TGCGC TATAGTTGACCAGGA  40 15
   TTMY_1701 NONE
   TTMY_1702 NONE
   TTMY_1703 NONE
   TTMY_1704 NONE
   TTMY_1705 1408152 .. 1408178 +  -7.8  -3.72576   AGAGCCGCTCCGAGA         GGGCCTCGAGGG CCT CCCGCGGCGTCC         TTTCCTCCCGCCAGC  61 191
   TTMY_1707 NONE
   TTMY_1708 1410725 .. 1410744 +  -4.8  -3.53091   GGTGGGGGCGGGGGA            GGTGGAGC TTTT GCCCCTCC             TTTAACCCACCCCAT  52 1
   TTMY_1709 1411307 .. 1411326 +    -7  -2.74012   CGAGGTCGTCCCGCC            CCGCCAGG GACT CCAGGTGG             TGCTTAAGCTCGTGG  46 53
   TTMY_1712 NONE
   TTMY_1713 NONE
   TTMY_1714 1414441 .. 1414485 +  -5.5  -3.30159   TTCGTCCGCGAGGAG GTCCTTACCCCGTGAGGCTTC CCC GCGACCTCACCGGGGAGGAAC TTGTCAAGAGGTTAG  51 11
   TTMY_1715 NONE
   TTMY_1716 NONE
   TTMY_1717 1417621 .. 1417642 + -14.4  -3.68853   AAGGGCCACCACCAA           GGCGGGCC CCGCCT GGCCCGCC            TTTAGGCCTTTTTCC  79 193
   TTMY_1722 NONE
   TTMY_1723 NONE
   TTMY_1724 NONE
   TTMY_1725 NONE
   TTMY_1726 1423943 .. 1423970 + -12.6  -2.66316   GCTCTTCCCCAGGGC        CCCCATGCGGGC TTGC GCCAGCAGGGGG         TGGTATCATAAGAAC  64 98
   TTMY_1727 NONE
   TTMY_1728 1425323 .. 1425334 +  -5.8  -3.55563   TCTTGGGAAAGGCCC                GGGT GAGG ACCC                 TTTGGGGAATGAGGT  53 260
   TTMY_1734 1430866 .. 1430896 +   -11  -3.30771   GTAGATCTTGGTCTC       CCCCGCCCGCACCG GGA TGGTGAGGGTGAGG       TTCTCCAGGATCTCC  64 192
   TTMY_1750 1438202 .. 1438226 +  -9.1  -2.71364   GGCCTCGAGGTAGGC          GGGGTCGCGGG CGG CCCGCACCTCC          TCCTTAAGCCGCTCC  51 353
   TTMY_1753 1438978 .. 1439010 + -18.3  -4.07687   GGGGTAGGCGCCTAG      GCCTGGGGCCCGGGG GTT CCCCGGGCCCTCGCC      TTTTGCCCCCAAGCT 100 34
   TTMY_1755 NONE
        mnmA NONE
   TTMY_1757 1443481 .. 1443506 + -21.9  -3.60627   TAACCCTGGGCTCCA         GGGGGTGGGGG GTAC CCCCCACCCCC          TTTAGAATGGGGTAG 100 38
        pstC NONE
   TTMY_1759 NONE
        pstB NONE
   TTMY_1761 1447591 .. 1447609 +  -6.6  -2.75963   CCTCTTCCTCCCCGC             CCTCTTCC GCC GGGCGAGG             CTTTAGCATGCGGCT  47 1
   TTMY_1762 NONE
   TTMY_1763 NONE
   TTMY_1764 1450344 .. 1450373 +    -2  -3.29144   AGGTCCGGGTCAAAC       CCCTGCCGGGAA AGGACC TTCCCGTAAGGC        TTCTCCCGGGCCTCC  45 300
   TTMY_1770 1454540 .. 1454576 +   -10  -3.28712   GTCCATGTCCCCGGC    GCCCGCGGAGGCGGGG GTGGA CTCCTTCTTCTCGGGC    TTCTCCGCCACCACG  63 111
   TTMY_1776 1461339 .. 1461356 +  -6.9  -3.54424   CTTCCCCTCGCCCCG             GACAGGG TATA CCCTGGC              TTTGGAAGCGTGGAA  58 45
   TTMY_1777 NONE
   TTMY_1778 NONE
   TTMY_1779 1464210 .. 1464226 + -13.7  -3.38272   TGAGGGAGTCAATGT              CCACGGC GTA GCCGTGG              TTCTGGCTGGTGATC  73 304
   TTMY_1789 NONE
        ruvA 1475373 .. 1475383 +  -8.2  -3.14132   TTTCCCGCTGGAGGT                 CGGG CAC CCCG                 TTGGTGAGGAGGGCG  56 316
   TTMY_1795 NONE
   TTMY_1796 NONE
   TTMY_1797 NONE
   TTMY_1798 NONE
   TTMY_1799 NONE
   TTMY_1800 1480015 .. 1480039 +  -8.6  -3.28712   CCCCCCTTGCGGAAG         GCCC-GCCT-GG GAG CCGAGGCCGGGC         TTCTGGGCGCAGCCC  58 108
   TTMY_1801 1480427 .. 1480437 +  -8.2  -3.36492   TCCGCCTTGAACCCC                 GGCG GAC CGCC                 TTATACCCTTAGGGG  60 161
   TTMY_1802 1481130 .. 1481164 +  -5.8  -3.01712   GAAGCAGGGCGAGGA    GGGCCT-T-GCGGCTT TCCTC AAGCCGCCACAGGGCC    TCTTCCCAAGGGCCA  47 444
TaqDRAFT_3932 1481511 .. 1481549 +  -5.8  -4.25104   CTGGAGGAGCGTGAA   GAGGGATGAGGTTCTGGG ACA CCTCGGCCCTCGTTCCCC   TTTTGGTGCGGGAAG  69 17
TaqDRAFT_3931 NONE
        fabL NONE
   TTMY_1807 NONE
   TTMY_1808 1485156 .. 1485170 +  -2.7   -2.7728   CGGGGGGCACTGGTA               GCCCC GGCAA GAGGC               TCCTTGGGGTTTACC  40 25
   TTMY_1809 1486491 .. 1486502 +  -7.2  -2.59431   CCGCACGGGGGCCCC                GGCC AAAG GGCC                 TCGCTTCTGGCCCGG  47 63
   TTMY_1812 NONE
   TTMY_1813 NONE
   TTMY_1814 NONE
   TTMY_1815 NONE
   TTMY_1816 NONE
   TTMY_1817 1493029 .. 1493050 + -18.7  -3.83026   CAAGAAGGCCCCAAA           GCCCCCCGC CTAG GCGGGGGGC            TTTGCTATGAAAAGG 100 42
   TTMY_1818 1493771 .. 1493803 +  -3.3  -2.78384   CTGAGAGGCAGGGCC      GGCTAAGCGGTGG ACAACCC TCTCCCCTTGGCC      TATAATCACAAAGGC  40 20
   TTMY_1819 NONE
   TTMY_1820 NONE
   TTMY_1821 1494096 .. 1494106 +  -2.4  -3.92745   CCTCGGAAGTGAGGC                 GGGG AAA CCCA                 TTTATGGCAGTTTTT  56 66
   TTMY_1824 NONE
   TTMY_1825 1498289 .. 1498312 +  -8.9  -3.32109   TTGGAAGAGCTTTCT          CCCCC-GAAG ACCAC CTTCCGGGGG          TCTTCTCCTCTCTCC  58 220
   TTMY_1830 NONE
   TTMY_1831 NONE
   TTMY_1832 NONE
   TTMY_1833 1504798 .. 1504834 +  -9.9  -3.61398   GTAGCTAAGGCCTCC    GGCGGGAGCCTGCGCCC GGG GGTGGCCGTCTTCCGCC    TTCTTGCCGCCCAGG  67 37
   TTMY_1834 1505515 .. 1505542 +  -4.8  -4.81249   CTTATAAGAAGACCT        GCCGCGGT AGGTTCCCGTGC GCCGCGGC         TTTTTGAGTTTGCAG  79 77
   TTMY_1835 1506097 .. 1506117 +  -3.9  -3.16564   GGGCGCGCGTATCCT            GAAGGCG TGCGCTT CGCCCTC            TTCCTCGCCTGGGCC  45 41
   TTMY_1836 1507252 .. 1507267 +  -5.4  -3.35813   CATGGCCCGGGGGCA              CC-CCGT AGG ACGGCGG              TTACTTGAGCTCCAC  53 59
   TTMY_1843 1512157 .. 1512210 +  -4.9  -3.14344   GGGGTAGGCGGTGAT CCCCGTGGCCCTGGCCGCCC-TGCTT TGG GGGCTTGGGGGGCCCTGGCCGGGCGG TTCATGCGGGAGATC  47 73
   TTMY_1844 1512948 .. 1512960 +  -3.3  -2.62184   CCTTTTGGGCCTGTG                GCTCC ACC GGAGG                TGATATGGCGGCGCG  39 10
   TTMY_1845 NONE
   TTMY_1846 1515605 .. 1515662 +  -4.3  -3.55563   TAGGCGAGGCGCAAG GGCTCCACCTCCACCGGGGTGGCGTGGAAG GTG CTTCC-C-CCGCCCAGGTCG-G-TG-AGCC TTTCCGAGGTGAGGT  52 38
   TTMY_1850 1519841 .. 1519853 +  -6.2  -3.52204   GGGGGTTCTCCTTCT                GGCC CTTGC GGCC                TTCCTTTCCGCCTGC  56 82
   TTMY_1851 1520295 .. 1520321 +  -2.9  -2.78438   AGACGTACTTTTACG        TCCGC-TAGGGG CTTG CCCGAACGCGGA         GTTTAGGGTATCATC  40 18
   TTMY_1852 1521465 .. 1521490 + -21.9  -4.17023   CCGGGCGAAGGCCGA         GGCCCCCAGGG CTTG CCCTGGGGGCC          TTTTGAAGTGCTTCG 100 42
   TTMY_1857 NONE
   TTMY_1858 1527021 .. 1527046 +   -14  -2.74018   GGTGCCTATCCCGCC         CCCGCCGCTC AAAAGG GAGCGGTGGG          CTATATTTTTCCTCA  69 117
   TTMY_1859 1527653 .. 1527698 + -23.2  -4.07885   GAGGAAGAGGCCTGA GCGCCTCCGCCCCCCGGGGC GCCCAA GCCCGGGCGGGAGGAGGCGC TTTTGGGGCCCCATG 100 26
   TTMY_1863 1531149 .. 1531178 +  -3.5  -2.71364   AGGAGCTGAGGGAGC       GCTTCTTCAACAC CCCC GAGCTCAAGAAGC        TCATTGAAGGCATGA  41 32
   TTMY_1864 NONE
   TTMY_1865 1534378 .. 1534388 +  -6.8  -3.65902   GGTCGGGGTGGGGGA                 GGAG GAG CTCC                 TTTCCCTGGCGTAAG  59 346
        dnaE NONE
   TTMY_1869 1539805 .. 1539815 +  -2.4  -3.30124   CGGGGGAGGCCCAGG                 AGGC GGT GCCC                 TTCTAGGGGGTGGGC  44 9
   TTMY_1870 NONE
   TTMY_1871 NONE
   TTMY_1872 1541505 .. 1541520 +    -6  -3.64703   AACGTACCAGGCGAG              GGTCGG CCCC CCGTCC               TTTACGTAGCGGAAG  57 156
   TTMY_1875 1544780 .. 1544796 +  -3.5  -4.08945   GGACCAGCCGCCTTC              GGGCACC TCT GGGGCGC              TTTTCCAGAGGTCGT  61 182
   TTMY_1877 NONE
   TTMY_1878 NONE
   TTMY_1879 1547849 .. 1547862 +  -3.7  -3.62046   CCCACTGCTTGGGGA               GGGGC ATCC GCCCG                TTCTTGAGCAGGTCC  53 459
   TTMY_1882 1549567 .. 1549589 +  -3.4   -3.1634   CGGGCCTGGGCCTTC          G-GCCTCGCC TACCT GGCG-GGCAC          TTACCTCCTTTCCCC  44 143
   TTMY_1883 NONE
   TTMY_1884 1550874 .. 1550895 +  -5.7  -3.72576   AGCCGCATAAGCGAA           ACAAGGCCC TTTC GGGCCTCGG            TTTGGTGCCGGGGGC  57 432
   TTMY_1887 NONE
   TTMY_1888 NONE
   TTMY_1889 1554260 .. 1554286 + -20.2  -3.33696   CAATAGCGCGGCTTC         GGGGTGGGCCTT TTT AGGGCCCACCCC         TTCCTTGCGAGGAGG 100 35
   TTMY_1890 NONE
   TTMY_1891 NONE
   TTMY_1892 NONE
   TTMY_1893 NONE
   TTMY_1894 1557366 .. 1557379 +  -9.5  -2.62983   CGGGCAGAAGATTGA               GGCCC TGGA GGGCC                TCATCTAGACCTCGC  54 4
   TTMY_1895 NONE
   TTMY_1896 NONE
   TTMY_1897 NONE
   TTMY_1898 NONE
   TTMY_1899 NONE
   TTMY_1900 NONE
   TTMY_1901 NONE
   TTMY_1902 1560904 .. 1560916 +  -6.9  -2.79183   AAGATCGTCTCCCTG                GCGCC GGA GGTGC                TCTAATGCGGGTGAA  48 8
   TTMY_1903 NONE
   TTMY_1904 NONE
        rpsZ NONE
   TTMY_1906 NONE
   TTMY_1907 NONE
   TTMY_1908 NONE
   TTMY_1909 NONE
   TTMY_1910 NONE
   TTMY_1911 1564483 .. 1564502 +  -8.6  -3.28924   GCCGGTCCTCCTGGA            GGCC-TGAG ATG CTCAAGGCC            TTCTGGAGCGCCCTG  58 19
   TTMY_1912 NONE
   TTMY_1913 NONE
   TTMY_1914 NONE
   TTMY_1915 1567424 .. 1567452 +  -3.1  -2.62184   CTGCGACAAGTGCAA       GGT-GATCCGCC GGCACG GGCGGGTCTACG        TCATCTGCGAGAACC  39 79
   TTMY_1916 NONE
   TTMY_1917 NONE
   TTMY_1918 1568951 .. 1568972 +  -3.7  -3.14878   GAGTTTTACTCCAGG           TAAGCC-CCT GGA AGGAGGCGTA           TGTTGGATTCCAAGC  45 23
   TTMY_1919 NONE
   TTMY_1920 1570292 .. 1570318 + -17.3  -3.54459   GCCCCGCCGGGACCG        GCCCCCCGGAGC CTCG GC-CCGGGGGGC         TTTGCGCCACCTTGG  89 40
   TTMY_1922 1571844 .. 1571884 + -11.1  -3.18681   TGGGGCTTCGGGGGC GGAGGAGGCGCATCCCCG CCTCCT CGGGGGTGCGG-TCCCCC  TTCCTGAGGTTGCAG  64 115
   TTMY_1923 NONE
   TTMY_1924 NONE
   TTMY_1925 NONE
   TTMY_1926 1576009 .. 1576025 +  -4.3  -3.92522   AGCGGCCCCCCGTGT              CCGTCAG GAT CTGGCGC              TTTCTCCCCTTGACC  61 493
   TTMY_1929 NONE
   TTMY_1930 1577534 .. 1577555 + -15.1  -4.02108   GGTAGAGTGGGCTTT           GGCCCCGGG TTTT TCCGGGGCC            TTTGCTTATACTGGG  88 46
   TTMY_1931 NONE
   TTMY_1932 NONE
   TTMY_1933 1580161 .. 1580173 +  -3.3  -2.69649   AGGTGGTGCGGGCCT                TCCAC TAA GGGGA                CTTGTGTCCCGGTCT  40 18
   TTMY_1934 NONE
   TTMY_1935 1581484 .. 1581519 + -20.5  -3.24708   AGTAAGGCCTATGCC    CGCCCCCCACGGG ACCTCCTTCC CCCGTGGGGGGCG     TATCTTTAGACCATG 100 36
   TTMY_1936 NONE
   TTMY_1937 NONE
   TTMY_1938 NONE
   TTMY_1939 1584452 .. 1584464 +  -4.8  -2.87132   GGGAGCAAGTCCTGC                GGGA GGCCA TCCC                TCTATGAGGAACCCC  44 6
   TTMY_1940 1584782 .. 1584792 +  -6.8  -3.54902   GGTTCAGGTACAAGC                 CCTC TTG GAGG                 TTGATTCTTGAATCA  58 4
   TTMY_1941 NONE
  RLTM_09154 NONE
   TTMY_1943 1589170 .. 1589181 +  -3.6  -4.25104   AGCCCGAGGTCCTCC                GGTC CCAC GGCC                 TTTTGCTCCCGGAGG  66 82
   TTMY_1946 1591885 .. 1591918 + -19.5  -3.90744   AGGAAGAGCTTTTGG     GGCCCCCACCGCGGC GAAA GCCGCGGTGGGGCAC      TTATTTGGGGGCCGC 100 92
   TTMY_1954 1598789 .. 1598809 +   -14  -3.99805   CCCCCGTTCCTTCGG            GGGGCCCT GCCTG AGGGCCCC            TTTAGCTTTTTCCCG  84 42
   TTMY_1955 1600792 .. 1600817 + -21.9   -4.7373   GGGTGGTATAGTGAG         GCCCGCTGGGC TTTA GCCCAGCGGGC          TTTTTGATGGAATAA 100 44
   TTMY_1956 NONE
   TTMY_1957 1603138 .. 1603170 + -22.8  -3.05816   GAAGGTCCTTTTGGG     GC-CCCCACCGCGGC GAAA GCCGCGGTGGGGTGC      TTAACTACCCCATGC 100 108
   TTMY_1962 NONE
   TTMY_1963 1609188 .. 1609215 + -24.2  -2.70932   AGGTCCTCTTGGGGC        CCCCACCGCGGC GAAA GCCGCGGTGGGG         TACTTAAAGGGCCCA 100 86
   TTMY_1964 1609683 .. 1609717 + -10.1  -2.62616   CGTGTCCCGGGCCCT    GGCGGG-GGTAAAGGAG ATC CTCCTT-ACGGCCCGCC    TGGTCTAGGGGCTAC  57 15
   TTMY_1968 1612340 .. 1612363 + -19.6  -2.70525   GGCGTGAGGCCTTAA          CCCCCCTGGG TTCT CCCAGGGGGG           CTTACTTTAGGGCCC  93 42
   TTMY_1972 NONE
   TTMY_1973 1616404 .. 1616423 +  -5.6  -4.08945   GTGGAGGACCAAAAG            CTTCCAGG GGGC CCGGGAGG             TTTTGAGGGCCTCCT  65 351
   TTMY_1976 1617948 .. 1617959 +  -7.2  -3.72576   CCGGGCCGCGGCCGA                GGCC TTGA GGCC                 TTTGGTGCCCGAGGA  61 129
   TTMY_1979 1619838 .. 1619887 +  -8.9  -3.01712   ATCCCCTCTTTCCTT CGCCCGACCGGCGCGGGGGAGCT TTGA GGCGGCCCCGTTCCGGGAGGGGG TGTTCAGGGCACCAC  55 40
   TTMY_1983 1624010 .. 1624053 + -18.1  -4.07687   GGGAAAACCTGTAAA ACCGCCTGCCTCCTTCGCC GGGTAG GGCGGGGGAGGCAGGAGGG TTTTCCCGGGGGGCT 100 27
   TTMY_1989 1627332 .. 1627342 +  -6.8  -4.07568   CCCAAAGCAAGGCTG                 GGGA AGC TCCC                 TTTTGGGGCCCCCGC  67 72
   TTMY_1992 NONE
   TTMY_1993 NONE
   TTMY_1994 NONE
   TTMY_1995 NONE
   TTMY_1996 NONE
   TTMY_1997 1635515 .. 1635528 +  -3.7  -3.32963   CGCTGGCCCTGATCT               CCGCC GAAC GGGGG                TTCTAAGGTAAGGAT  47 6
   TTMY_1998 1635999 .. 1636020 + -12.9  -3.05384   GGGGAGGCCCTTTGG           GGCCCCCGC CGCG GCGGGGGGC            TTAAGTACCCCACCG  70 57
   TTMY_1999 1636807 .. 1636822 +  -3.2  -2.50492   AGAGAAAGAGGAGTA              GCCC AAGGGTCC GGGC               GTGTTCCTGGTGGTG  39 25
   TTMY_2000 NONE
   TTMY_2001 1638433 .. 1638460 +  -4.1  -4.08216   CTCAATGAACTCGCG        CCTCG-GGGCCA CGTCC TGGCCCATGAGC        TTTTCAAAGAGCTCG  63 115
   TTMY_2003 1640870 .. 1640881 +  -4.4   -3.3579   CAGGGCTGGAGCGTT                TTCC TGGA GGAA                 TCTTTCCACACCTTT  51 81
   TTMY_2007 1645032 .. 1645051 +    -2  -3.95988   GCCCGAATTGCCGTG            TCAAGTGC ATAT GCACTCGC             TTCTCTTTGGTTTTC  56 43
   TTMY_2008 1645927 .. 1645984 +  -6.2  -4.21676   GCCTCAACCTGCGAA G-TAGGTGTGTGAGGATGGGGAGCGGCC TTAA GGCCGCTCCCCG-CTTGACGTTCCGGTC TTTTCGCTGCATTCT  70 22
   TTMY_2009 NONE
   TTMY_2010 NONE
   TTMY_2011 NONE
   TTMY_2012 NONE
   TTMY_2013 1651718 .. 1651732 +  -4.2  -2.63596   GGCCCTCCGGGGCCT               CTACCC GTA GGCTAG               TGGTGTGGACTGGCC  40 16
   TTMY_2014 NONE
   TTMY_2015 1652330 .. 1652340 +  -2.4  -3.14527   CGCGCCCTGGCCCAA                 GGCC TGC GACC                 TCTTCATCCCCCTTA  42 92
   TTMY_2016 NONE
   TTMY_2017 NONE
   TTMY_2018 NONE
   TTMY_2019 NONE
   TTMY_2020 1655120 .. 1655154 +  -6.9  -3.74693   AGGCGCCCGCCTGAA     GGCAAGGGGGGGTGG CTTTA CCGCCCCCCTCGTCC     TTTGGTAGACTCCCG  61 27
   TTMY_2021 NONE
   TTMY_2022 NONE
   TTMY_2023 NONE
   TTMY_2024 NONE
   TTMY_2025 NONE
   TTMY_2026 1661918 .. 1661942 +  -2.8  -3.33696   TCTCCCCCCTCGAGG         TG-GCGGCGCGC TAA GCG-GCTGCACG         TTGATTCCGCAACAC  46 12
   TTMY_2027 1662544 .. 1662579 +  -6.8  -3.53012   AGCCTGCCCCCCTGG    GGCGTGCAGACTTCCCC GGA GAGGAGGTCTAT-CGCC    TTTCCCCCCCGGGGG  58 89
   TTMY_2029 NONE
   TTMY_2030 NONE
   TTMY_2031 NONE
   TTMY_2032 1666585 .. 1666613 +  -2.9  -3.91032   GGCCCTGCGGCGGGC        GCTTTCCGGCTCC TAG GGTGCTGGAGCTC        TTTCTCAAGTCCTTC  58 10
   TTMY_2033 1667275 .. 1667295 +  -8.2  -2.78384   CGCAGGCCTCGAGGG            CCCGGATG AGCCA CTTCCGGG            TCTCGTGGGGGAAGA  51 87
   TTMY_2043 1673838 .. 1673852 +  -4.2  -4.56597   CACCATTCCCCTGGA               GGCG AGGTGAC CGCC               TTTTTCGCCGCCGAG  70 16
   TTMY_2044 1674519 .. 1674533 +  -2.1  -3.21276   TGAGGAGGGGGTCCG              GCATGG AAAT CCA-GC               TCTTCTCGGGGAGCG  42 38
   TTMY_2045 1675693 .. 1675724 +  -2.8  -4.26076   CCCGGAAAAGCTCCT      CGCTCCGCCGCTTCT GGT GGTAGCGGAGGC-CG      TTTTGGTGGGCCTCG  64 274
   TTMY_2048 1678519 .. 1678568 +  -7.8  -2.83747   CCCCGTGGAGGAAGC CGAAGGGCTGGTGGACCTTG-GG CGTCA CCGCAAGCTCCGCCACCACCTCG TCCTTCTCCGCCTTG  49 286
   TTMY_2050 NONE
   TTMY_2051 NONE
   TTMY_2052 1680164 .. 1680194 + -16.9  -4.56597   CTAAGCGGGACGAAA       AGATGGAGGCGGC CAAAA GCCGCCTCCATCC       TTTTTGGCGGAGGGG 100 62
         icd 1684602 .. 1684636 +  -4.9  -3.53012   GGCGGAAAGCCCGAG    CTCGGGGAGGAGGAAG ACCC CTTGC-CCTCCCCGCC     TTTCCACCAGGACGC  51 143
   TTMY_2060 1686988 .. 1687017 + -15.1  -2.71263   GCGACTAGGCCCCAC       CCT-AGGGGGTGCC CTA GGCACCCCTTCAGG       TAGTTGCAAGAGCTT  72 509
   TTMY_2061 1689898 .. 1689910 +  -2.6  -2.71712   CTTAGGCGAGAATAG                GGGG ATGGA CCTC                GTTTACCGCCCCGAG  38 36
   TTMY_2062 1691254 .. 1691280 + -12.3  -3.50853   CGTAGACCCCGCAGA        GCCCCT-CCTCC AGGA GGGGGCAGGGGC         TTCTGCTTAGGAAGA  74 307
   TTMY_2064 NONE
   TTMY_2065 1692488 .. 1692503 + -11.8   -3.8046   AGTTTCTTCACAAAA              GGGGGC CTAG GCCCCC               TTTAAGGTTTTTGAG  79 43
   TTMY_2066 NONE
   TTMY_2067 1693502 .. 1693532 + -17.6  -3.14468   AGGCCCTTAAGCCGC       GCCGCCTCCTCC GCGAGAA GGGGGAGGCGGC       TTGGGTCTACTCCCG  86 41
  TNMX_04920 NONE
   TTMY_2073 NONE
   TTMY_2074 1699120 .. 1699134 +   -10  -2.73771   CCGGGCCTGGAGGAC               CTCCTC CTG GAGGAG               CTTTCCGCCCTCTAC  57 54
   TTMY_2075 1700066 .. 1700092 + -13.8  -2.58861   GTCTACCCCAGGGTC         TTCGTCCTAGAG AAG CTCTAGGGCGAG         CTTCTCCCCCTCCTC  69 16
   TTMY_2086 1708429 .. 1708473 + -16.4  -3.05384   GCTGGGTGGCGAAGC TCCGC-CCTCCCGCCTCCACC CTTA GGTGCAGGTGGGGGGTGCGGC TTGGGTACCAGCCGG  75 234
   TTMY_2089 NONE
   TTMY_2090 NONE
   TTMY_2091 1711146 .. 1711156 +  -2.4  -2.78384   GGGCAAACGTCCCTA                 CCCC GGT GGCG                 TATACTCAGGAAGGC  38 40
        hemA NONE
   TTMY_2093 NONE
   TTMY_2094 1713511 .. 1713542 +   -10  -2.73875   AGCGCTCAAAGAGGT      GGGGGAGGTGTTCC TCGG GGATCCCCTCCCCG       TCGTCTTCCACCCGG  54 173
   TTMY_2101 NONE
   TTMY_2102 1721634 .. 1721648 +  -2.7   -3.9712   CGCATAAACTTCCCA               AGCCC CGTAT GGGCG               TTTCTGCTACCATGC  58 43
   TTMY_2103 1722802 .. 1722814 +  -4.7  -3.02144   GTTCGCACCACCTTG                AGGCC CAA GGCCA                TCTTGCCCGGGGTGG  45 283
   TTMY_2106 1725103 .. 1725118 +    -6  -3.14564   GACCCCCTCTGACAC              CGCCCC GCAT GGGGCC               TTCCTGCGGCCCTCG  51 29
        dnaK 1729030 .. 1729055 + -19.7  -3.28712   TGAGGCGCAAGGCCG         GGGCCCCGCTC CGAG GGGCGGGGCCC          TTCTAGGGAGGGCCC 100 38
   TTMY_2109 NONE
   TTMY_2110 NONE
        dnaJ 1730734 .. 1730745 +  -7.2  -3.75505   GCTTCTCCTCCGCCT                CGCG CGTG CGCG                 TTCTGATTTTTAACA  61 86
   TTMY_2112 NONE
   TTMY_2113 NONE
   TTMY_2114 NONE
   TTMY_2115 NONE
   TTMY_2116 NONE
   TTMY_2117 NONE
   TTMY_2118 1737003 .. 1737014 +    -3  -2.71144   AGGAAAGCTAAAATC                TCTT GCTG AAGA                 TACTTGACAAGAGTA  40 30
   TTMY_2119 NONE
   TTMY_2120 NONE
   TTMY_2121 NONE
   TTMY_2122 NONE
   TTMY_2123 NONE
   TTMY_2124 NONE
   TTMY_2125 1741466 .. 1741482 +  -6.5  -3.14132   AGCGACTTCTTGAAG              CTCATCC TAG GGAGGAG              TTGATGCACGGCGCG  51 5
   TTMY_2126 1742674 .. 1742695 +  -2.9  -3.15861   CGTAGGCGGAGAGCA           CCTTGGCGAG GTA CTC-CCGCGG           TTCGTCCCGCTCCTG  44 53
   TTMY_2128 1745699 .. 1745712 +  -3.7  -2.53213   TAGGCCCGGGAGAGG               AGGGC TGAG GCCCC                TGCCTTGAGGGCTTG  40 38
  Ocepr_0429 NONE
  Ocepr_0428 NONE
   TTMY_2136 1754905 .. 1754927 +  -4.7   -3.2964   GGTTCACGGGCTCCA           CCATGCGGA AGTGC TCCGCCGGG           TTCTCCAGGAGCTTT  49 74
   TTMY_2140 1759987 .. 1760004 + -14.1  -4.48987   CGGCCCACCAACGCG             CCCCCGG GAAA CCGGGGG              TTTTCCTTATCGGGG 100 32
   TTMY_2141 1761311 .. 1761360 + -13.7  -3.15544   AGCGGTGGCGGTGGC GCTCCAGCA-CCTCCTCC-CTGCC GTAGA GGCGGTGGAGGAGGGTGCCGG-GC TTGATGCGCATGGGC  70 273
   TTMY_2143 NONE
   TTMY_2144 1763650 .. 1763675 + -21.9  -4.41047   GGCCTGGCGGAGGAA         GCGCCCTGGGG GCTT CCCCAGGGCGC          TTTTCCTTCGGGCCT 100 41
   TTMY_2147 NONE
   TTMY_2148 1766723 .. 1766738 +    -6  -3.57144   CAGAGGGCGAGCTGG              GCCTGC CTGA GCTGGC               TTTCCGGGTCAAAGG  53 307
   TTMY_2153 NONE
   TTMY_2154 NONE
        sdhA NONE
       sdhB2 1773586 .. 1773608 + -18.4  -4.06055   TGGCGTAAAAGGGGC           GCGCTCCGGG AAG CCCGGGGCGC           TTTGCTTTAGGGCGT 100 123
   TTMY_2167 1784190 .. 1784203 +  -8.1  -3.54129   GCCCCTTCCCCGCCC               CGAGG CGGC CCTCG                TTTGAGAGGCCTCTC  60 7
   TTMY_2168 1784459 .. 1784486 +  -4.6  -3.72576   ACGGGCGCCCGGGGC        CCCCGGACCGGC GCAA GCCCGCGTGGGG         TTTAGTCCGCCGCCA  55 54
   TTMY_2170 NONE
   TTMY_2171 1788415 .. 1788449 +  -8.3  -4.08767   GAAGATGAGGGCCTC     GCCCACCCGGCCCCG GAGGA CGGGGACGGCGGCGC     TTTTGGCCACCTGGG  71 105
   TTMY_2174 1790423 .. 1790436 +  -3.7  -2.75528   TGGTGGAGGGTCTTC               CCGCC CTCA GGCTG                TAGTATGTTGGCGGT  41 9
   TTMY_2175 1791135 .. 1791154 +  -7.8  -3.55444   TATGGTGGAGGTGGC            CCTCGAGG CCGT CCTGGAGG             TTTGAACCATGGAGC  60 1
   TTMY_2176 NONE
   TTMY_2177 1792929 .. 1792952 +  -8.8  -3.57144   TTTCCGCCGGGGCAT          C-CCCTTGGGC GGA GCCCGGGGGCG          TTTAGGCCTGGGGCC  62 60
   TTMY_2183 NONE
   TTMY_2184 1799964 .. 1799974 +  -6.8  -4.09685   GCACCCGGATGGGCC                 CCAG GGC CTGG                 TTTTCCAGGGTGAGG  67 75
   TTMY_2188 NONE
   TTMY_2189 NONE
   TTMY_2190 1803389 .. 1803412 + -19.6  -3.28791   AGCTGGCCTAAAGGG          GGTGCCCGGG GACC CCCGGGCACC           TTATGGAAGGGAGGT 100 30
   TTMY_2191 NONE
   TTMY_2192 1804828 .. 1804879 + -12.5  -2.64472   TCAGCTTCTTTCCGC CCTGGCGGTCCT-G-GGGCCTAGGG GTTGGG CCC-GGGCCCTCGAGGACC-CCAGG TCCCTTTACGACCTC  64 57
   TTMY_2193 NONE
   TTMY_2194 NONE
   TTMY_2195 NONE
   TTMY_2196 NONE
   TTMY_2197 NONE
   TTMY_2198 NONE
   TTMY_2199 1810478 .. 1810503 + -17.5  -3.17194   GCCTAAGGGCTTTTT         ACCCCCGCCCC TTTA GGGGCGGGGGG          TTCCCTTGCGGGAAT  84 35
   TTMY_2200 NONE
   TTMY_2201 NONE
   TTMY_2202 NONE
   TTMY_2203 NONE
   TTMY_2204 1814068 .. 1814088 +  -5.4  -2.57211   CGCCTTAGGAAGCCT           G-GGCTACG CCAG CGTGGCCAC            CTTCTACGCCGGGCT  44 33
   TTMY_2205 1814339 .. 1814370 +  -4.4  -3.55444   TTACAGAAACCTCAC      CTTCCCTCGGCTATC CTA GGT-GCTGAAGGAGG      TTTGACCGATGCAGA  52 47
   TTMY_2206 1815179 .. 1815200 +  -3.5  -3.61356   GGAAGCACCTCCTCG           GCCTCCTGG TCAT CCTGGGCGC            TTTGGGGTACATGGT  51 139
        ccmE NONE
   TTMY_2208 NONE
        ccmG NONE
   TTMY_2210 NONE
   TTMY_2211 NONE
   TTMY_2212 1820029 .. 1820049 +    -6  -3.15544   GCCCCAAGCTTGGGC            GGGGCCCT CAGGA GGGGCCCA            TTAGTAGGGCTCGCC  51 59
   TTMY_2214 NONE
     TTHB212 1822062 .. 1822096 +  -3.5  -3.58533   CAAGGGAAGAGAAGA    GGGGGGTAAGTAAGGTG TGC CGCCC-ACC-ACCCCCC    TTTCCCAAGTTATCA  53 331
   TTMY_2217 NONE
    TT_C1216 1823824 .. 1823851 +    -4  -5.00616   TTGCAAAAAGGGCAT        CCCCCGTGGC GGAAGAAG GCCAAGAGGG         TTTTTTGGCCCCGCC  85 396
    TT_P0170 1826324 .. 1826345 + -18.7  -4.05446   AGCCCTTCCGGCCTT           GGGCCCCCC GGCC GGGGGGCCC            TTTATACTTGGGCCA 100 39
    TT_P0171 1826774 .. 1826788 +  -5.6  -4.12188   AGGTGAAGGAGGCCG               TGGCCA CCT TGGCCC               TTTTCCGGATGGTGA  64 35
   TTMY_2222 NONE
   TTMY_2223 1828121 .. 1828144 + -11.6  -2.96692   CCGGTGGGCGGGGAC          GGGGCCCGCC TTCA GGAGGGCCTC           TATCTCCTCCTCCTC  62 466
   TTMY_2226 1829843 .. 1829860 +  -3.3  -3.36492   GCCCCGGAAGAAGAA             GTAGGCT ATTC GGCCTCC              TTCTCGGCTTCCCAA  47 495
TaqDRAFT_5129 1832345 .. 1832372 +  -5.4  -3.61103   CCCTGCGAGGACGTC        CCCCGTCC-CCCC GGT GGCCAGGGCGGGG        TTTCCCGTGGGGTTC  57 262
   TTMY_2232 1834375 .. 1834385 +  -2.4  -4.64598   TTAGGCCCAGGTCCT                 CCCC GAT GCGG                 TTTTTCAGGTAGTTC  74 37
   TTMY_2234 1836744 .. 1836755 +  -7.2  -3.09834   CATGGTATCCCTTGA                GGCC TTCG GGCC                 TTCCGTGCTAGGGTA  52 506
   TTMY_2236 1838596 .. 1838632 +  -7.9  -3.55563   ACCCGCACCTTCACC   GCCACCGCC-C-TGGCC AAGAA GGCCTCGAGGCGGGGGC   TTTGCGGCGTGAGAT  58 475
    NCU08757 1848465 .. 1848479 +    -7  -3.15249   GTAAGCGTCCGCCAG               GCCCAC GAT GCGGGC               TTCCTCGGGGATCTC  52 199
   TTMY_2250 1850550 .. 1850568 + -11.7  -3.29704   CCAGGCAAGAAAAAA             GGGCCAG CTTCA CTGGCCC             TGTCTTTACTCCCAG  68 310
   TTMY_2253 1852034 .. 1852064 +  -5.3  -3.58726   GGCGCCCACGGCGTT      CACCA-GGCGGTCG GCTC CGGCCTCCCTGGGG       TTGTCTATGAGGACC  57 420
   TTMY_2256 1853995 .. 1854014 +  -7.1  -4.08216   GAGGGGAAGGGGCGA            GGCCTTG AGGGTC CAGGGCC             TTTTGGGGAGGGTGA  67 103
   TTMY_2259 NONE
   TTMY_2260 NONE
   TTMY_2261 1857723 .. 1857737 +  -3.4  -4.07568   TCCCGGGGAAGCCTT               TGGGCC TCG GCCCCG               TTTTCCCGAAGGCGC  61 440
   TTMY_2266 1860859 .. 1860887 +   -11  -3.57144   GAGGAGCTGGAGGAG       GCGGTCGGGGTCC CCGA GGACCTCGGC-GC        TTTCCGCCTCGGCCG  70 397
TCCBUS3UF1_6580 NONE
   TTMY_2279 1869565 .. 1869613 +  -4.3  -3.55444   AAGACCAGGGTGCGG GCCTCCTCCAAGAGGGCCCCC GCCGCCA GGGGGTTCACCTGGCTGAAGC TTTCCACACTCACCG  52 464
   TTMY_2281 NONE
   TTMY_2282 NONE
   TTMY_2283 NONE
   TTMY_2284 1872879 .. 1872891 +  -6.2   -3.5456   GCTAGCGCCCCCCCG                GCGG AAGGG CCGC                TTACTTCTTGACCTT  56 36
   TTMY_2289 1876283 .. 1876311 + -10.2  -2.62983   CTGGCCAAGGAGGGG        GCGTGAGGCCGC CCCAT GCGGGCTTGCGC        TCCTGTGGGGGTCCC  57 20
   TTMY_2290 1877135 .. 1877180 +    -6  -2.79915   CGTGGACTACGAGGC CTTCTGCGGCCTGCGCTGAGG CTACT CCTCCCCGCGGGC-GAAGGGG TATGATGGACTCCGT  47 7
   TTMY_2291 1878377 .. 1878403 + -15.9  -3.32844   GCCCGCGGGCTTGGG         GAAGGGGTCGC AGGAA GCGGCCCCTTC         TTGTACACTAGAGGG  80 43
   TTMY_2292 NONE
   TTMY_2293 NONE
   TTMY_2294 1883101 .. 1883117 +  -7.9  -3.07443   GGAGCGTTTAGTCGC              GGGCCTC GGC GAGGACC              TTCCCTGAGGTGTCG  53 1
   TTMY_2302 1889788 .. 1889810 +  -7.6  -3.62046   AGACGTGTTCGCCCA           GGGCCTCCTG GAT CACGGGGTCC           TTCTTCAGGGCCTCG  61 189
   TTMY_2304 1892967 .. 1892977 +  -8.2  -4.17048   AAAGGACGCCCCCCG                 GGGG GTT CCCC                 TTCTTTTGGGGCCCC  76 143
   TTMY_2308 1896739 .. 1896757 +  -4.4  -3.54424   AGAGCTCAGGGGGTT             AGGGGGTT TTT GGCCCCCG             TTTAAGGGGCTAGGG  52 43
   TTMY_2309 1897491 .. 1897525 +  -5.8  -3.63627   CTCCTCGCCTACGCC   CGGGC-CAC-C-CAGGG GGGG CCTTGAGCGTGCGCCCG    TTTCGCCTCTACGAC  57 2
   TTMY_2310 NONE
   TTMY_2311 1900939 .. 1900955 +  -3.5  -2.73364   TGGCGGCGAGGGCGA              GGAGGCC GAT GGGCACC              TCCTTAAGCTCCGCC  41 89
   TTMY_2313 1902118 .. 1902128 +  -4.6    -3.214   CCTCGTCCACGAGAA                 CCGC ACC GTGG                 TCTTCGTCTAATCCC  47 4
   TTMY_2314 NONE
   TTMY_2315 1904377 .. 1904427 +  -5.9  -4.10161   ACCTCGCGGAAGTAG CGGAGGGCCCCTTCGTGGTAGGGG ATGG CCCCGCCCACGAAGCG-CACGGCG TTTTCGGGGGTGGTG  65 423
       TRPM6 1907901 .. 1907924 +  -2.4  -3.53091   GCTCTTGGGGTCTAT          GGGGAC GAGGTGGATGCG GTCCCC           TTTGCGGGCCAGGGT  48 428
   TTMY_2322 1911027 .. 1911037 +  -8.2  -3.70919   GCCCCGCCTTCCCGT                 CCCC ATA GGGG                 TTCTTGGCCTTTCGC  64 83
   TTMY_2328 1915960 .. 1915979 + -10.6  -2.64616   GGATGGGCCCGGGAT            CCCCCCGG TCGC CCGGGAGG             TGCTATGCGTGCGCA  59 275
   TTMY_2330 1917299 .. 1917313 +    -2  -3.29461   CCATCCCCCTGCCCG               TGGCCT AGG AGGCGG               TTGTGGCGAGGCTTC  44 18
TCCBUS3UF1_16340 1917733 .. 1917767 + -16.5  -2.90496   GGAGGTGGTGGTCCT    GG-GGGCCGGGGTG-GC GGG GCTCACCCTGGCCCGCC    TCCTTTGGGAAAGGG  79 110
   TTMY_2333 NONE
   TTMY_2334 NONE
   TTMY_2335 NONE
   TTMY_2336 NONE
   TTMY_2337 NONE
   TTMY_2338 NONE
   TTMY_2339 NONE
   TTMY_2340 NONE
   TTMY_2341 1924907 .. 1924924 + -14.1  -5.75342   GGGAGGCTTCCCCGC             CCGGGGC GCGT GCCCCGG              TTTTTTTTAGGGAGG 100 79
   TTMY_2342 1926930 .. 1926943 +  -4.5  -4.73388   TGAGTATGAGGCGAG               GAGTG CTTG CGCTC                TTTTTCCTGGCCCTT  79 155
TaqDRAFT_4403 1928081 .. 1928095 +  -3.4  -3.71848   TTCACCACGATGTCC               GGGGTG ATC CCCTCC               TTGTTGATGGAACGG  53 326
   TTMY_2345 NONE
   TTMY_2346 1930719 .. 1930762 + -13.2  -3.45027   GGGGGCGGGAGCTCG CCATCTACCCGAGGACGAAC GGAT GCTCGTTCTGGGGTACATGG TCTTTCCTCCCCGGT  75 232
   TTMY_2347 1931401 .. 1931412 +  -7.2    -4.371   CTTCAGCCTACCCCA                GGCG ACAA CGCC                 TTTTCCTCTCCTGCC  75 458
   TTMY_2349 1932465 .. 1932477 +  -4.7  -3.28712   AGGGGCGCGTAAGAT                GGGGC CAT GCGCC                TTCTCCACACCGCCG  49 39
   TTMY_2350 NONE
   TTMY_2351 NONE
   TTMY_2352 NONE
   TTMY_2353 1939194 .. 1939221 +  -8.2  -3.02461   CCCCAGGGCGTAGTC        CGCCGTGGGGTC GCGG GCCCCCTCGGGG         TCTTCCCCCCGCTTC  54 225
   TTMY_2362 NONE
   TTMY_2363 NONE
   TTMY_2364 1949097 .. 1949107 +  -8.2  -2.72344   TCTAAGGCGGTCCAG                 GGGC CCC GCCC                 TCCTTGGAGGTGGGG  52 36
   TTMY_2365 NONE
   TTMY_2366 NONE
   TTMY_2367 NONE
      atpA-2 1952144 .. 1952164 +  -3.1  -3.53012   GGGGCGAGGAGGGGG            CGGTGACCA TCG TGGGGGCCG            TTTCCCCGCCGGGCG  49 20
   TTMY_2369 NONE
        ahaB NONE
   TTMY_2371 1954893 .. 1954919 + -17.2  -5.10461   AAACCCCCTAGAGGG         GCCCGGGGAGCT TCA GGCCCCCCGGGC         TTTTTCTTGACTCGG 100 39
   TTMY_2372 1956166 .. 1956180 + -11.4  -4.14392   CGCCTCCCCTCGTAG               GCGGAG AGG CTCCGC               TTTTGGGGCTTCAGC  80 229
   TTMY_2376 NONE
   TTMY_2377 NONE
   TTMY_2378 NONE
   TTMY_2379 NONE
   TTMY_2380 1963189 .. 1963201 +  -6.2   -3.1247   GCGCCCTGCGCGGGG                GCCC CGAAA GGGC                TTCGCTCTGGAAACT  51 41
   TTMY_2381 1964766 .. 1964798 + -15.6  -2.87132   AACCAGCCCGAAGGA     GG-GGGGCGCCGCTT GTAG AGGCGGCGCTCCGCC      TCTATGGCCGCCCGG  76 44
   TTMY_2387 1972161 .. 1972174 +  -9.5  -3.60627   GGCTCACCCCTTCCA               GGCCC CTCA GGGCC                TTTAGGATCCGCTCC  67 153
   TTMY_2391 1975033 .. 1975081 + -13.8  -3.96148   GGGAAAGGGAAGCGG CCCCTTCGC-CTCCCGTGCCGGC CTTG GCCTGCGTGGGGGTGTAAAGGGG TTTCTCATCCCCAAG  84 61
        secA 1978353 .. 1978363 +  -4.6  -3.53444   GGCCTCCTTCAGCTC                 CTCC GAG GGGG                 TTTGCCCAAGCCTAA  51 269
   TTMY_2397 NONE
         acs 1984757 .. 1984787 + -20.4  -3.22475   AGTACGGGCACCGCG       CCCCGGCGGGGTGG CCT TCACCCCGCCGGGC       TCTTGTGCACGTGCA 100 140
   TTMY_2405 NONE
   TTMY_2406 NONE
   TTMY_2407 NONE
   TTMY_2408 NONE
   TTMY_2409 NONE
   TTMY_2410 1990528 .. 1990541 +  -9.5  -3.95448   CATCCTGGTCACCGT               GGGCC CGGG GGCCC                TTTGGCTTTTCCTCT  73 71
   TTMY_2412 NONE
   TTMY_2413 NONE
   TTMY_2414 1993191 .. 1993232 + -11.5  -4.07568   GCCGGGCGTATACTG GGCCCATGAAGAAGGCC CTGGTCCT GGCCCTCCTCCTGGGCC  TTTTCGCCCAGGGGC  82 55
   TTMY_2415 1993665 .. 1993694 +  -6.9  -3.58522   CGTGGGTGAAGGCGG       GGGGGCGGGGCCG CCAG CGGGCCTTCCGCC        TTTCCAGCTCCTCCT  59 108
   TTMY_2423 2000404 .. 2000456 +  -2.5  -3.55444   CCCCGGCACCAGGAG GCCCCCGCGAGGGGGCCTAAG CTTTTGCTACA CTTAGGCCATGAAGCGGGTGC TTTCCGGCATCCAGC  48 33
   TTMY_2424 2001453 .. 2001468 +  -5.4   -3.5936   GGCGCCCGGTCCTCC              GGTGAT CCGC ATCGCC               TTTCCCGGCTTTGAG  54 21
   TTMY_2425 2002118 .. 2002130 +  -5.5  -3.28712   CCGCCTAGGGCGGGC                GGGTA CAA TGCCC                TTATGGACGAGGCGG  51 33
   TTMY_2426 2002891 .. 2002905 +  -4.2   -3.9226   ATTTGTTCCAGCAGG               GCCAGA ATC TCTTGC               TTTATCGCCTGTATT  59 226
   TTMY_2437 2011889 .. 2011920 + -10.9  -3.53444   TTTTAGGGCGCATCC      CAT-AACCCCCCGG GCCAA CCGGGGGGTTCAAG      TTTAAGGAGGGGTCC  70 133
   TTMY_2438 2013620 .. 2013630 +  -3.2  -2.66787   GGGAGGAGGTGGAGG                 CGTG AGG CATG                 TGATCTCCGTCTTGG  39 21
   TTMY_2439 NONE
   TTMY_2440 2015149 .. 2015178 + -14.9  -4.08767   GGTAGGCTAAGGGAC       CTTGCGGGGCCCC TTCG GGGGCCCCGTGCG        TTTTCGGGAGGTGGA  89 31
   TTMY_2441 NONE
   TTMY_2442 2018424 .. 2018434 +  -6.8  -3.52539   GGGGCCTTTGGTGGA                 CCTC CAG GAGG                 TTCTCCTTCAGGTTC  56 113
   TTMY_2446 2021807 .. 2021825 +  -7.3  -3.14564   AAGGGTTTGCCCTGC             GCCCAGG GCGCA CCGGGGC             TTGGTGGCCAGGTAG  54 409
   TTMY_2452 NONE
   TTMY_2453 NONE
   TTMY_2454 2026863 .. 2026874 +  -7.2  -3.11732   ACGTGCCCTGGTCCC                GGGC CTAG GCCC                 TTGCATAAGTTTGCG  52 18
   TTMY_2455 2027819 .. 2027841 +    -4  -3.59979   CACCCTGCTAAAGTA           GGGGTATGGT CCG GCCCTACCGC           TTTAGCCTGGAGGAG  51 25
   TTMY_2456 NONE
   TTMY_2457 NONE
        argJ 2030555 .. 2030570 +    -9  -2.88544   GTAGCATATCTTCAC              GAGGGT GGAA ACCCTC               TATATGGAGGTGAAG  56 59
   TTMY_2459 2031285 .. 2031316 + -11.6  -4.74084   CTAAGCCTAGGGTAG      CATGAAGGGGATGC GTAG GCATCCCCTTCTTC       TTTTGCTTTTCCTTT 100 37
   TTMY_2460 2031885 .. 2031931 +   -10  -3.03124   AGTGCCCCACCGCGG CGGGGGCCCCAAAAGGGAGCTT CCC AAGCCTCCTTTCGGGCAACCCG TGTTGCGAAATCAAC  60 40
   TTMY_2461 NONE
   TTMY_2462 NONE
   TTMY_2463 NONE
   TTMY_2464 2033871 .. 2033900 +  -8.5  -4.42238   ACCACGATCCGGCCC       TCGAGGGCCCG CACCACCT CGGGCCCTAGG        TTTTCCTTGGCCTCC  78 300
   TTMY_2474 2042130 .. 2042150 + -13.9  -3.53012   GGTCCCCATCGTGGC            CGGCCCCCC TGC GGGGGGCGG            TTTGACCCGGGCCCA  78 69
   TTMY_2475 NONE
   TTMY_2476 NONE
   TTMY_2477 2044758 .. 2044776 + -11.6  -2.74248   GCCCCTCCCCCTCCT             CACGCCCC CGG GGGGCGGG             CTTTAGGAGGTCTTG  62 1
   TTMY_2478 NONE
   TTMY_2479 2047610 .. 2047637 +  -9.8  -3.59979   AGCCCTGCTTCGGAA        GGCCGGGCTT GAAGCGGA GGGCCCGGCC         TTTCCCCTCCACGGG  67 70
   TTMY_2480 NONE
   TTMY_2481 2049102 .. 2049122 +  -3.1  -2.75844   CGAGGTATAGTGGCC            CCATGCGCG AAG CCCGGGTGG            CTTTGGAGTCCGCGG  40 31
   TTMY_2482 NONE
   TTMY_2483 2050794 .. 2050810 +  -4.4  -4.15044   GTCACCCGGCGCTAC              CCCTGA TATAC TTAGGG              TTTGTTGGGGCCGAG  62 20
   TTMY_2484 NONE
        trkA 2053649 .. 2053698 + -12.8  -3.02144   GTTTGCCCTGGGGTA CCTCGGCACCCTCCGGGGCAG-GCC CAG GGCCCAGCCCCAGCGGG--CCGAGG TCTTCGCCGGGGTGG  67 176
   TTMY_2486 NONE
   TTMY_2487 2057406 .. 2057416 +  -2.4  -3.60348   GGAGTGGGTGCGCTG                 GGCC TAG GGGC                 TTGTATAATCTTCCG  48 19
   TTMY_2488 2058224 .. 2058272 + -11.4  -4.26903   TGCAGATAACCCTGC CGCGCCCGGACGCCCAAAGGCC CTAAA GGCCCCAGGCCGTCCGGGCCCC TTTTCGTCCCATGCG  91 32
   TTMY_2489 NONE
   TTMY_2490 2061928 .. 2061945 +  -2.6  -4.08216   CCCAGATACACCCAG             GCCTCG CTCACC CGAGGA              TTTTGCACAAGGTAG  60 242
   TTMY_2493 2064144 .. 2064176 +  -2.5  -4.07568   TAGTCCTCAGCGGAA      GCTTTGGCGTAGGGG CTT TCCGGACGCTTGAGC      TTTTCGGAGAAGAGC  60 494
   TTMY_2504 NONE
   TTMY_2505 NONE
   TTMY_2506 2075091 .. 2075108 + -12.7  -3.79043   TGGGGGGAGCTTGAA             GCCCTGG GCCT CCAGGGC              TTTCAGTTCGTCATC  79 151
   TTMY_2512 2077014 .. 2077047 + -11.6  -3.31461   CTCTTCCAGGGCCTT     CCGCACCGCCCTCG CCACCT CGGGGGCGTTGGGG      TTGTCCCCGTGGATG  67 114
   TTMY_2520 NONE
     TTHB161 NONE
   TTMY_2522 NONE
   TTMY_2523 NONE
   TTMY_2524 NONE
   TTMY_2525 NONE
   TTMY_2526 2088792 .. 2088805 +  -5.2  -4.14511   TCTGGAAGGGGTCCT               GGCC AAGCTG GGCC                TTTTGGCCTAGCCTT  64 1
   TTMY_2528 2092567 .. 2092583 +  -9.3  -2.94099   GTGCATACTTCACAC              GGGCCCC GGG GGGCCCC              TATATACTCGGGCCA  56 49
   TTMY_2529 NONE
   TTMY_2530 NONE
   TTMY_2531 2096147 .. 2096169 +  -3.3  -4.13282   GGAAGTGGTCCTTTA          GGG-GGCCTG GATG CGGGCGACCC           TTTTCCGCCTCTACT  59 25
   TTMY_2532 NONE
   TTMY_2533 2098130 .. 2098145 +  -3.2  -2.73124   CCTGGGCTGGATGGT              GGGC AAGCTGGA GCCC               CTTTAGGAGGTGAAG  40 4
     TTHB152 2099618 .. 2099628 +  -8.2  -3.03124   TCCCAAGCCTTATTT                 CGGG CCA CCCG                 TGTTGCGGAATCAAC  55 87
   TTMY_2535 2100995 .. 2101005 +  -8.2  -3.03124   TCCCAAGCCTTATTT                 CGGG CCA CCCG                 TGTTGCGGAATCAAC  55 87
   TTMY_2536 NONE
   TTMY_2537 NONE
   TTMY_2538 2104371 .. 2104393 +    -9  -3.53012   CCGTGGACCACGAAG           GCCCCCCAGG CGT CCTTGGGCGC           TTTGAGGGGAAGGCC  64 457
   TTMY_2540 2106877 .. 2106903 +  -5.8  -3.53012   GCCGGAGCCACGGGA         GGCCTGGG GGGCGCCTTTG CCCGGGCC         TTTAAGGGGCACGAG  53 117
   TTMY_2542 NONE
   TTMY_2543 2107969 .. 2107983 +  -3.4  -3.79519   CCTCGGGAGGGGGTG               GGCCGT GAG GCGGGC               TTTCCTCCTCGCCTT  56 18
   TTMY_2544 2108461 .. 2108473 +  -3.3  -2.60212   CGAGGTGGAGGTCTA                CCTAG AGG CGAGG                CTTCTCCGGTGATCC  39 1
   TTMY_2545 2109411 .. 2109422 +  -7.2  -4.18197   GCGCTCTGGCGGCGG                GGGC CCTG GCCC                 TTTTCCCTGGGGGCT  72 85
   TTMY_2546 2111348 .. 2111378 +  -9.8  -4.32201   TAACCCAAAAATAGT       GGCCGCTATG CTTTCCCGTGT CATAGCGGCC       TTTTGCATTCCTTCG  88 44
   TTMY_2547 NONE
   TTMY_2548 2112501 .. 2112512 +  -3.6  -3.44146   GGTGGTGGAAAAAGG                GGGG CATA CCTC                 TTCGTTCTGAAGGCC  49 4
   TTMY_2549 2113192 .. 2113215 +  -3.1  -3.15861   AAGGCATCTGAACCC          GGCTTCG CGGGAAGGGC CGGAGCC           TTCCTCGGCCTACTG  44 141
   TTMY_2550 NONE
   TTMY_2551 2116519 .. 2116529 +  -4.6  -4.58685   ACCCTCCAGGTGCAG                 GTGC AGG GCGC                 TTTTTGACGAGGTTT  75 8
     TTHB181 NONE
     TTHB181 2119292 .. 2119302 +  -2.4  -2.74836   AGGTACCCATGAAGC                 GGAC TTT GGCC                 CTCTTTCTCCTCCTC   0 29
   TTMY_2541 NONE
   TTMY_2539 2103359 .. 2103386 -  -9.9  -3.28712   TCCTGGCGGCGAGAA        GGCCCG-AGGAA GTCCT TCCCTTCGGGCC        CTACCGGGCCACCCG  63 493
TaqDRAFT_4570 2088561 .. 2088577 -  -5.7  -4.19238   GTCCCAAGGGGAAAA              GCCCCCG GCG CCAGGGC              CGAGCCCGGTCCTCC  69 261
    TT_P0114 NONE
    TT_P0113 2081410 .. 2081444 -  -3.5  -3.58533   TGATAACTTGGGAAA    GGGGGGT-GGT-GGGCG GCA CACCTTACTTACCCCCC    TCTTCTCTTCCCTTG  51 55
   TTMY_2517 2080176 .. 2080191 -  -3.2  -3.59979   TTCGGCCAGGCGAAA              GGCCGCC CCC AG-GGCC              TTTTCCCAAAGGCTC  49 165
   TTMY_2516 NONE
   TTMY_2515 NONE
   TTMY_2514 NONE
   TTMY_2513 2076943 .. 2076962 -  -7.8  -2.62263   ACTTGGGTGATAGTA            GTCCCCAC GCAC GTGGGGAT             GGACCAACGCTAGAA  50 35
   TTMY_2511 NONE
Ththe16_1984 NONE
   TTMY_2509 NONE
   TTMY_2508 NONE
  Marky_1777 2074973 .. 2074985 -  -6.2  -4.13945   AGGGTTAGGGGAAAA                GGCC TCAAG GGCC                TTGCAACAGGAGGGT  66 17
   TTMY_2503 NONE
   TTMY_2502 2071547 .. 2071559 -  -3.3  -4.36914   CTCCTCCTCAGAAAA                GCTCC TCC GGATC                AAAGCTTTGTACCCT  66 5
   TTMY_2501 2069805 .. 2069836 -   -26  -4.08692   TAATCCTTCGCAAAA      GGCCCCCTCTCCTC ATCC GAGGAGAGGGGGCC       TGGTCCTTTCTCCCT 100 39
   TTMY_2500 NONE
   TTMY_2499 NONE
   TTMY_2498 2067846 .. 2067876 -  -8.2  -4.56597   GGCCGCCTTGAAAAA       GGCCCGGAGGAG GAGGTAG CTCCTCACGGCC       CCACCTCCACGAAGC  81 18
   TTMY_2497 2066747 .. 2066760 -  -2.3  -2.70932   TCTTGGCCCTAAGCA               CGGTA CACC TCCCG                CTTGTGGCGCAGGAC  38 5
    TT_P0177 NONE
   TTMY_2495 NONE
    TT_P0174 2063659 .. 2063686 -   -22  -3.06796   GTCCATGGGAGGGAA        GCGCCCGGGGCC CTTA GGCCCCGGGCAC         CGGTTAGCGGAGGAG 100 29
     TTHB215 2062326 .. 2062361 -  -2.5  -3.53012   CCCTCGTCCGTCAAA   CCGCTGGGGTGTGCCCT ACGA AGAGC-CACCCTT-CGG    GCATAACACGCTTTT  48 122
   TTMY_2491 2061663 .. 2061673 -  -6.8  -3.35679   GCGGCTTAGGGAGAA                 CCTG GCG CAGG                 CCGAGAGGATCCGGG  53 222
   TTMY_2473 NONE
   TTMY_2472 2039137 .. 2039149 -  -4.7  -2.82834   GAGGCCAGGATCAGA                GGGGG CTT CCCGC                TTCCCAAAGCCTTAG  44 8
   TTMY_2471 NONE
   TTMY_2470 NONE
   TTMY_2469 NONE
   TTMY_2468 2036069 .. 2036098 -  -4.1  -3.95324   CAGGGCGAAGAACAA       GGCCAGGGCGTGGA TCC TCC-CGCTCATGCC       TTCGGTTCCTGGTCA  59 38
   TTMY_2467 NONE
   TTMY_2466 NONE
   TTMY_2465 2033600 .. 2033627 - -24.2  -2.71011   ATCGCCTTTTAAGTA        CCCCACCGCGGC TTTC GCCGCGGTGGGG         GCCCCAAAAGGACCT 100 223
  TSC_c08510 NONE
  TSC_c08500 NONE
  TSC_c08490 NONE
  TSC_c08480 NONE
  TSC_c08480 2021426 .. 2021440 -  -3.5  -4.21194   GGCGAGCAGCTAAAA               CTCCC GGAAA GAGAG               AGGTGTGGTCTGGAC  65 5
     slr1901 NONE
   TTMY_2444 NONE
   TTMY_2443 2018047 .. 2018058 -  -7.2  -3.53563   ACACTGCCGCGGAAA                GCCC CTTC GGGC                 CCGTCTCCGCCCTGG  58 284
Ththe16_1229 NONE
   TTMY_2435 2010004 .. 2010016 -  -2.7  -4.35524   GCCCCAAAGCTAAAA                TTACC TCC AGTAA                GGTGAGACCTTTACG  66 36
   TTMY_2434 NONE
   TTMY_2433 NONE
  RLTM_02661 2007399 .. 2007454 - -13.9  -2.73159   GGAAGGGTGTGAAAG CGG-TGTGAAGGCCAGGCCCACCCCA CCGCC CGGGGCGGGCCTGGGGATCACCTCCG GCTCAGGACCACGGG  69 17
   TTMY_2431 NONE
   TTMY_2430 2005599 .. 2005631 - -17.8  -3.27525   GGGCTCCAAAGGGAA      GGCCCGGGCTAC TCCCGGCAT GTAGCCCGGGCC      TTCATAGGCCCTAAT  89 36
  Mesil_0887 2004153 .. 2004165 -  -4.7  -3.64599   GGAGGACACCTCAAA                GGGCG CGC CGCCT                AACAAAGCCGATAGA  55 51
   TTMY_2428 2003505 .. 2003552 - -14.9  -4.38712   TTTACCGCTAGAAAA GGCCCTGCTGCATCAGAACTGG CGGCT CCATCTCGGACGC-GCAGGGCC AGGCTTCCCAAGGCG 100 75
   TTMY_2427 2002738 .. 2002750 -  -4.7  -4.09685   CCGGAGGTGGTAAAA                GCGCC GGG GGCTC                AATTCGCCCAACTTT  62 214
        leuC NONE
        leuD NONE
   TTMY_2420 NONE
   TTMY_2419 NONE
   TTMY_2418 NONE
   TTMY_2417 NONE
   TTMY_2416 1993541 .. 1993561 - -18.3  -2.64337   GACGTCAAAAGAGAG            CGGGGCCAG AAC CTGGCCCCG            GACCGGATCCAAAGG  85 43
   TTMY_2411 1990287 .. 1990297 -  -2.4  -3.28712   TCCCGCCCGGGAGAA                 CCTG GTG CGGG                 CGGTGGTGGAGGAGA  45 224
   TTMY_2404 1986700 .. 1986712 -  -3.3  -3.41569   GGAGGGACTCAAAGA                GGCCT TCC ATGCC                TTAGTTTTACCGCAG  48 32
   TTMY_2403 NONE
   TTMY_2402 NONE
   TTMY_2401 NONE
   TTMY_2400 NONE
   TTMY_2399 1984646 .. 1984673 - -24.2  -2.71144   GAGGGGGCCTAAGTA        CCCCACCGCGGC GAAA GCCGCGGTGGGG         GCCCCAAAAGGACCT 100 126
   TTMY_2396 1981730 .. 1981748 - -10.2  -2.57463   AAGCCTTCCCAGAAG             GCCTCGGG GTC CTCGAGGC             TCGCCCGGTGGGCGG  57 354
   TTMY_2395 NONE
   TTMY_2394 1980117 .. 1980143 -  -5.1  -2.70932   GTTCCGCCTTAAGGA        GCCGCCTCAGGA TCTT TCCCGAG-CGGG         TCCGGGGAAGGCGTT  45 5
   TTMY_2393 1978153 .. 1978169 -  -3.5  -4.07568   TGGGGCCCCGGAAAA              GCGGCCC AAC GGGGCGA              AGCCTACTCCTCGAG  61 29
   TTMY_2390 NONE
   TTMY_2389 NONE
   TTMY_2388 1972038 .. 1972049 -  -2.2  -2.62184   TCGCCCCTTAGAGCA                TCCC CGCC AGGA                 AGCCCTCTTCCCGGA  38 6
   TTMY_2386 NONE
   TTMY_2385 NONE
   TTMY_2384 NONE
   TTMY_2383 1964922 .. 1964940 -  -2.3  -3.53224   TAGGCTTCCCGCAAA             CGGGCCA GGGTG TGGTCCA             GCTTCTCCTGGAGCC  48 106
   TTMY_2382 1964236 .. 1964265 -  -5.7  -3.79882   AGAAGATCCAGGAAA       CTTTCGGCCAGG TGCCCAT CCTGGCCG-AGG       ACCTGGGGGTCATCA  60 504
   TTMY_2375 NONE
   TTMY_2374 1956697 .. 1956707 -  -5.4  -2.66316   GCCCGCATCAGATCA                 CTTC CCG GAAG                 CCCACCCGCTCCGCC  44 7
   TTMY_2373 1955506 .. 1955537 -  -7.3  -4.87665   CGCCACCTACAAAAA     CGCCCAG-ATCGCCG TCTG CGGCGACGCCGGG-G      TGGGGGTGGTCACGG  86 404
   TTMY_2361 NONE
   TTMY_2360 NONE
   TTMY_2359 1944689 .. 1944705 -  -5.7  -3.41051   TCAGGCCCACTATAA              CGGAGGC CGC GCTCCCG              CGGGAAGGCTTTCCT  53 3
   TTMY_2358 NONE
   TTMY_2357 NONE
   TTMY_2356 1941108 .. 1941127 -  -4.8  -4.19238   GGCTGAAGGTGAAAA            GGGCCTCC TCCA GCTGGCCC             AGGCGGTACTGGGCG  66 211
   TTMY_2355 1939787 .. 1939809 -  -5.4  -4.08945   ACCACTCGTCCAAAA           GGGCGAAGAC CAT GCCCCCGCCA           GGTCCAGCGCCGCGA  64 338
   TTMY_2354 1938558 .. 1938595 -  -2.5  -3.01712   CCTGGGGGGTGAACA   CCCTCTTCCTCCGGGGGC TTT ACGCCCTGGGGAAG-GTG   CGGGAGGCGGTCACG  41 375
   TTMY_2348 1930656 .. 1930680 -   -10  -2.90194   ACGCCGTCAAGCACA          TGCTCCAGGA GGGCT TCCGGGAGCA          GGACATCCTCTCCGC  59 361
   TTMY_2344 1927793 .. 1927822 - -19.3  -3.51708   TAGCCGCTAAACCAA       GAGGGGGCCAGGC ACCT GCCTGGCCCCCTT        CGCCTTCGGGCTTAC 100 37
MDA_GLEAN10005801 1917231 .. 1917276 - -13.3  -2.81547   GGTGGAGATCAAGCA GGCC-ACG-CCCCACCTCCTC TTCGGG GAGGTGGTGGGGGCGAAGGCC CCGGCCCCCATCCCC  63 284
   TTMY_2329 1915506 .. 1915549 - -10.3  -2.72144   CCACTTCCGGGAAAG CCTCGCCCTC-CTCGCC-GAG CTTC CTCTGGGGAGAGAGGACGTGG TCTACCTCTCCCCCT  57 180
   TTMY_2327 NONE
   TTMY_2326 1913393 .. 1913413 -  -5.4  -3.21099   GGGGTCCAGGAGGAA           GAC-CCGCC TTTC GGCGATGTC            CGGGGGAGCTTGGCG  49 392
   TTMY_2325 NONE
   TTMY_2324 NONE
   TTMY_2323 NONE
   TTMY_2321 1908593 .. 1908605 -  -4.7  -2.52464   TGCGCCCCTAACCTA                CCCCG GCC CCGGG                CCCCTGTCAAGGGAG  42 10
   TTMY_2320 1907522 .. 1907557 - -13.3  -4.56597   GTTTCCCTCCAAAAA   GGCCCGGG-G-CCTGGG AAGG CCCAGGACACCCGGGCG    AAGCTTGGCGTTACT 100 36
   TTMY_2318 NONE
   TTMY_2317 NONE
   TTMY_2316 1903844 .. 1903859 -  -6.1  -4.07568   GGTCCGGCCGGAAAA              CCTCC CCGCCC GGAGG               AGCCTCGAGGCCCTG  67 117
   TTMY_2312 1900648 .. 1900660 -  -4.7  -3.53012   CTCCCCGCCGTCAAA                GCGGG CCA CCCCC                TGGGAAAGGCTCAAG  52 134
   TTMY_2307 1894203 .. 1894226 -   -21  -3.86015   GAGCTGGCCCACAAA          GGCCCCGGCC CTAA GGCCGGGGCC           AAGCCCTTTAGGCCA 100 33
   TTMY_2306 NONE
   TTMY_2305 1892955 .. 1892975 -  -6.7  -4.15565   GGTAGTAGCCCAAAA            GGACGCCCC CCG GGGGGTTCC            CCTTCTTTTGGGGCC  67 71
   TTMY_2303 NONE
   TTMY_2301 1888333 .. 1888343 -  -4.6  -4.07568   GGGGTGGCTCCAAAA                 GGAG CCA CCCC                 CTTTAGGCTTAGGCC  62 50
   TTMY_2300 NONE
   TTMY_2299 NONE
   TTMY_2298 NONE
   TTMY_2297 1884470 .. 1884489 - -16.4  -4.57073   GATGTGCTTGAAAAA            GCGCCCCC CCTT GGGGGCGC             AAGCGAGGGCGCCTC 100 47
   TTMY_2296 1884124 .. 1884140 -  -3.6  -3.29144   GGAGCGCCGCGAGAA              GGCCTT TCCTC ATGGCC              CCATGATACCCCTTC  47 178
   TTMY_2295 1882663 .. 1882676 -  -3.7  -4.32034   CTACCAGGAGGAAAA               CGCCC GCCT GGCCG                CCGCCGCCCTGAGGC  69 442
   TTMY_2288 NONE
   TTMY_2287 NONE
   TTMY_2286 NONE
   TTMY_2285 1872850 .. 1872884 -  -9.1   -4.2349   GGCGGAGATGGAAAA    GGGCGACCGGGGGGGC TAGC GCCCCCCCGG-CGGAA     GGGCCGCTTACTTCT  80 33
   TTMY_2280 NONE
   TTMY_2277 1867618 .. 1867631 -  -8.1  -3.29263   ATAGCGCTCCTAGAA               GGCGT TTAG ACGCC                ACCCTCCATTATAGC  56 74
   TTMY_2276 NONE
   TTMY_2275 NONE
   TTMY_2274 NONE
    TT_C0992 NONE
   TTMY_2272 1864142 .. 1864177 -  -5.2  -3.59979   CTGGGTCATGCCAAA    CCTCCTTGCCCCCAGG CTAG CACGGGGGCGAGGATT     TTGTAAACCTTCGGG  54 61
   TTMY_2271 1863524 .. 1863541 -  -4.7  -3.89346   CCTCCAGTCTATAAA             GGCCTAG CGCC CCTGGCC              CCGGCTTTCGGCGAG  58 11
   TTMY_2270 NONE
   TTMY_2269 1862496 .. 1862508 -  -5.5  -2.74144   GCTTCATGGCCAAAG                CCTCC CCG GAAGG                GCCACGCCGTAGGCC  45 1
   TTMY_2268 NONE
   TTMY_2267 1860360 .. 1860373 -  -2.3  -3.48276   CCTTCTTTGAGATAA               GGCTT TGGG ACGCC                AACGACCTCATTCAG  48 79
   TTMY_2265 NONE
   TTMY_2264 NONE
   TTMY_2263 NONE
   TTMY_2262 1857140 .. 1857159 -  -9.2  -3.30124   CGTCATGGGGGACAA            CCGCACCC TAGG GGGTTCGG             AGGACTCCCGCACCT  58 177
   TTMY_2258 NONE
    TTHA1371 1853685 .. 1853714 -  -6.3  -3.53091   AGCGCCTGGCGGAAA       CCCTGGGCCGGAA GCTC TCCCAGGCCACGG        GGAGCCCCTACCGGG  56 225
   TTMY_2255 NONE
   TTMY_2254 1851199 .. 1851212 -  -2.3  -2.96899   TGTTAACCAACTACA               CCACG GGGC CTTGG                GTTGTCGCCGGGTCG  41 415
   TTMY_2252 1851120 .. 1851138 -  -2.2  -2.56596   TGCTCTACCAACTGA             GCTACCTC GGC GTGGCGGC             CCCGACGGGACTCGA  38 21
   TTMY_2251 1851018 .. 1851041 - -15.3  -4.58773   CCCACCAAAGCAAAA          CGCCCGCTC CAAGGT GAGCGGGCG           CCAGGCTCGTCCTTG 100 40
   TTMY_2249 1848161 .. 1848178 -  -4.1  -3.43042   GCGGCCAGGAAAAAG             GCCC-AGG CCG CCTTGAGC             TCTATTCCTCCGAGG  49 27
   TTMY_2247 1847629 .. 1847662 -  -7.4  -2.75975   GGGGAATATACACTA     CACCCCGCCTTACCC GCGCA GGGTGAGG-AGGGCG     AGGACAAAGGCGAGG  51 1
   TTMY_2246 1846538 .. 1846570 - -11.1   -4.6902   TGACAACCCTAAAAA      GGAAGCCTGGCCCCC TTT GGGAGCCAGGAAGCC      TTTCCCGCCTACAGG 100 34
   TTMY_2245 1845319 .. 1845331 -  -6.9  -3.35813   GTTCAGCCTAATCAA                GGGGC TCC ACCCC                CCTCAACGCCAAGCC  56 5
   TTMY_2244 NONE
   TTMY_2243 NONE
        pilO NONE
   TTMY_2241 NONE
   TTMY_2240 NONE
   TTMY_2239 NONE
   TTMY_2238 NONE
   TTMY_2237 1837675 .. 1837701 -  -7.8  -2.70932   CCGTTTCCGCAAGGA         GGGGGGGGCCTG GAG CACGCCCCGCCT         GGAACGCCCTTCCCC  49 496
        acpS 1835867 .. 1835883 -  -6.5  -3.61398   GTGGCTCGGCAAGAA              GGAGCTC TTC AAGCCCC              CCTTGGGCTTCCTCA  59 491
   TTMY_2233 1833815 .. 1833849 -  -6.2  -3.91897   TGGCGCATCCAGAAA     GTGCGGGAGGCCAAGC CCA ACCCGGCCCACCACGC     CCTCGTGGAGCTGGA  65 489
   TTMY_2231 NONE
   TTMY_2230 1831755 .. 1831766 -  -3.6    -4.386   GAAGTTCTGAGAAAA                GCCC TGAA AGGC                 CTGTTCTCGCTTGGC  69 388
   TTMY_2228 NONE
    TT_C1029 1829111 .. 1829131 -  -3.9  -2.91274   TCTACTGGAAGTATA            CGGGGGA GGCGGAG TACCCCG            TCCGGGTCACGGGCC  43 264
   TTMY_2225 NONE
   TTMY_2224 1827671 .. 1827686 -  -4.6  -4.90917   AAAGCGAAGGAAAAA              GGGGGA CTAG TCCCCA               AGCCGCACCCGTACG  82 16
    TT_P0168 1823322 .. 1823332 -  -8.2  -3.03124   GTTGATTTCGCAACA                 CGGG TCG CCCG                 AAATAAGGCTTGGGA  55 87
    TT_P0166 1821723 .. 1821741 -  -3.1  -2.84878   GGGGGGAAGCCAAAG            GCCCACGG AGAT CC-TAGGC             TTGCCCAAGCTCTAG  41 37
   TTMY_2213 1820008 .. 1820034 - -13.6  -3.37881   TGAAGACAAAGCCAA         GGTCCCGCCCCA AGC TTGGGCGGGGCC         CTCAGGAGGGGCCCA  75 41
   TTMY_2187 NONE
   TTMY_2186 1800504 .. 1800528 -  -6.3  -3.01712   GGGGGCCGCCCAAGA          GGAGGGCGAAG CGC CTCATCCCTCC          AAGGGTACCGCCTGG  49 16
   TTMY_2185 1799498 .. 1799524 -  -3.4  -3.14468   GGCCAGTACACGGAA         GGCGTGGCCCTG GAG CGGCTCCTCGCC         CAGCGCTTCCCCGGG  45 412
   TTMY_2182 NONE
   TTMY_2181 1795192 .. 1795222 -  -7.5  -3.55622   TTGAACCGGGTCAAA      GTCTACCCCCGGGG ACTG CCCCGGG-GCAACC       CTGCCGAGGGCTAGG  60 45
   TTMY_2180 NONE
   TTMY_2179 NONE
   TTMY_2178 1792723 .. 1792747 -  -9.9  -3.75024   GGTGACCATGAACAA          CTCCGCCGGGA TTT TCCAGGTGGAG          GAGACCCTCACCAAG  70 232
   TTMY_2173 NONE
   TTMY_2172 1788185 .. 1788209 -  -4.1  -3.55444   CCTGGAGGGCCTAAA          GGCCAAGGGGG TGC CCCTCTTCGTC          CTCTCCCCCGAGCCC  51 204
   TTMY_2169 1784358 .. 1784370 -  -6.2  -4.11394   AGGCCACCCGGAAAA                GGCC TTTGG GGCC                GTGCTCCTCTTCGCG  67 143
   TTMY_2166 NONE
   TTMY_2165 1781530 .. 1781540 -  -2.4  -3.55563   AGCGGACGGCGGAAA                 GGTC CAT GCCC                 CTAGTCTAGCCGCAC  48 26
   TTMY_2164 NONE
        glpX 1779834 .. 1779844 -  -2.4  -2.74263   AGCCTACGCCGAAAG                 CCCC GGG GCGG                 ATGTCCTTGGGGAAG  38 115
   TTMY_2162 NONE
   TTMY_2161 1777385 .. 1777397 -  -3.3  -3.05596   GACCGGCCCAGGGAA                GCTTC CTA GAGGC                CTTTGGCCGGGGCCC  42 72
   TTMY_2160 NONE
   TTMY_2159 NONE
   TTMY_2158 NONE
        aspC 1773581 .. 1773613 -  -4.5  -4.07568   TGGGGTGGCGTAAAA      GGGGCGCGCTCCGGG AAG CCCGGGGCGCTTTGC      TTTAGGGCGTGAGCC  62 27
   TTMY_2152 1769530 .. 1769552 - -17.7  -4.04326   GAAGGAAACATGAAA           GGCCCCGGG GGGCT CCCGGGGCC           AGAGGGGGGCGGCCT 100 40
   TTMY_2151 NONE
   TTMY_2150 NONE
   TTMY_2149 1766410 .. 1766422 -  -6.9  -2.74523   TCATCCCCAAGACGA                GCGGC TAC GCCAC                GGAGTGGCTGGAGGG  48 67
   TTMY_2146 NONE
   TTMY_2145 1763650 .. 1763675 - -21.9  -3.14132   GGCCTGGCGGAGGAA         GCGCCCTGGGG GCTT CCCCAGGGCGC          TTTTCCTTCGGGCCT 100 39
        pyrG 1760607 .. 1760621 -    -7  -4.11216   GGTGGAGGTGGAAAA               GGGGGC CTT GCCCCG               CCTGGGGGCGCTTTT  67 464
   TTMY_2139 1759403 .. 1759420 - -10.5  -2.78384   GTTCCTGGGATTATA             CAGGCCG TGCC CGGCCCG              GTCAAGCCATTGTGG  57 47
   TTMY_2138 NONE
   TTMY_2137 1754796 .. 1754821 - -12.5  -4.14511   AAGGGCAGCGGAAAA         GCTCGGCCTGA GGAG CCGGGCCGAGC          TTGTGCGTTGGGCTT  82 62
   TTMY_2133 NONE
  Ocepr_0431 NONE
  CARN6_1984 NONE
   TTMY_2130 1746219 .. 1746239 -  -3.1  -4.12188   TGAGGAGTTCCAAAA            GTTCCCCGG GGT CCACGGGAC            AAATGTACCCGTCCC  59 104
   TTMY_2129 1745611 .. 1745627 - -11.5  -3.32647   GGGCAAGCAGAGGAA              CGGCCCC ACG GGGACCG              TGGAGCTCCAGTTCC  67 81
   TTMY_2127 1742646 .. 1742656 -  -6.8  -3.23853   CGCCGCTAAGGAATA                 GCCT TGT AGGC                 GGCGTAGGCGGAGAG  54 5
   TTMY_2107 1724673 .. 1724701 -  -4.3  -3.28712   CCTCGCGGTGGACAA        GGACCTCGAGGCC TTG GGCGTCTTGGACC        AGGCGGCCCTGCGCC  49 485
   TTMY_2105 NONE
   TTMY_2104 1722196 .. 1722215 -  -3.4  -3.29144   GGACCCCGGGGAGAA            GCGGCTCC TTAG GGAGGCGG             GGGTCCGGGTCTACG  47 422
   TTMY_2100 NONE
   TTMY_2099 NONE
   TTMY_2098 NONE
   TTMY_2097 NONE
   TTMY_2096 NONE
   TTMY_2095 1713279 .. 1713309 -  -8.9  -2.74012   GGACGAGGGGAAGGA      CCGCCTCGAGGTCC TGGA GGCCCTAG-GGCGG       GGGGAGATCAGCGTG  52 33
   TTMY_2088 NONE
   TTMY_2087 1708122 .. 1708134 -  -6.2  -3.37796   CGCGATTACCTAGAA                GCCC TACTG GGGC                TTCCGGTGGACCTGC  53 129
   TTMY_2085 1706474 .. 1706501 - -14.8  -2.73364   CCTTCATTCTAAGTA        CCCCGCTTCGGC TTGC GCCAGAGCGGGG         GCCCCAAAAGGCTTC  72 82
   TTMY_2084 NONE
   TTMY_2083 NONE
   TTMY_2082 NONE
   TTMY_2081 NONE
   TTMY_2080 NONE
   TTMY_2079 NONE
   TTMY_2078 1701528 .. 1701551 -    -3  -2.79796   CTCCACTCTAGGACA          CCCCCCGG GGTCAGGA CCGTGAGG           GTCTTCCCCCGGTCT  40 12
   TTMY_2077 NONE
   TTMY_2076 1699994 .. 1700006 -  -4.7  -3.53012   CCCGCCCTCCTCAAA                CGGGC CCT GCCCC                CGGGCTTTGCCCTCC  51 91
   TTMY_2071 NONE
        glyA NONE
   TTMY_2069 NONE
   TTMY_2068 1693424 .. 1693454 - -12.5  -2.51471   GAGAACCTGAGGAAG       GCCCACGCCCGCA TGGAC TCCGGGCACGGGC       GGGGGAAGATCGTCC  63 48
   TTMY_2063 1690461 .. 1690477 -  -7.2  -3.45366   TGGTGAAGGAAGGAA              GGGGCC GGGGA AGCCCC              TGGCTCAAGCGCTTC  58 470
   TTMY_2059 1684019 .. 1684037 -  -3.7   -4.7373   GCACGTGATGAAAAA             CCCCAGG ACAGG CCGGGAG             ATCGTCATCAAGGAC  76 473
   TTMY_2057 NONE
   TTMY_2056 1681929 .. 1681943 -  -7.8  -3.05816   CCAGGCGCCAGGCAA               CCCCCA TCA TAGGGG               AGGCCGGGCCTCTGG  53 116
   TTMY_2055 NONE
        mesJ NONE
   TTMY_2053 1680165 .. 1680193 - -21.1   -4.2679   TAAGCGGGACGAAAA        GATGGAGGCGGCC AAA AGCCGCCTCCATC        CTTTTTGGCGGAGGG 100 34
        comA 1678081 .. 1678121 -  -8.8  -3.28712   CTTCCTCCGGCACAA GGCCCACGCCGAGGCCCTC ATGG GCGGGGGGCGG-GTGGGCC  TGGGCACGGACTGGG  58 136
   TTMY_2047 1676076 .. 1676092 -  -9.3  -3.24924   CGGCGATGGAGAAGA              CCCGGGC CTG GCCCTGG              AGGTGGCTCACGTCG  61 33
   TTMY_2046 1675098 .. 1675112 -    -7  -4.08216   CCATGCTGGCCAAAA               GGCGCC TCG GGCCCC               GGGAGACTTCCGTGA  67 415
        guaA NONE
   TTMY_2041 1671247 .. 1671267 -  -2.4  -3.99324   GCTGAGGACGATAAA            GGTGGGCA TGGCT TGCCTCCC            TTTCCACTCTACGCC  56 34
   TTMY_2040 NONE
  RLTM_08694 NONE
   TTMY_2038 NONE
   TTMY_2037 NONE
        rnhA NONE
   TTMY_2035 NONE
   TTMY_2034 NONE
   TTMY_2028 1662227 .. 1662245 -  -5.2  -2.78384   TCCCCCTGGACTACA             CCGGCC TCTCCTC GGCCAG             GCTCCGCCTCTACGA  44 257
   TTMY_2006 NONE
   TTMY_2005 NONE
   TTMY_2004 1640336 .. 1640353 -  -2.5  -4.56597   TTTTTCCCTTAAAAA             TGGGGGG TCTT CCCGCCT              AAGCCCGGAGGGTTT  67 473
   TTMY_2002 1638070 .. 1638086 -  -5.7  -2.82519   TTACGAGACCAAGTA              CACCCCG GGC CGGGCCG              AGCTCCTCATCCCCG  44 324
   TTMY_1991 1628556 .. 1628572 -  -2.1  -3.09516   GGCCTTATGACGCAA              GACCCGC ATC GCTGCTC              CTTGGAGGGGATTAT  42 37
   TTMY_1990 1626933 .. 1626953 -  -3.8  -3.53811   GGGAGGCGGCCCAAA            GCGCCCCG GGCTT CGGGGACC            GCTCCGGCTACCAGA  50 443
   TTMY_1988 NONE
   TTMY_1987 NONE
   TTMY_1986 NONE
   TTMY_1985 NONE
  RLTM_08929 1624011 .. 1624052 - -17.2  -4.19276   GGAAAACCTGTAAAA CCGCCTGCCTCCTTCGCC GGGTAG GGCGGGGGAGGCAGGAGG  GTTTTCCCGGGGGGC 100 42
   TTMY_1982 1621396 .. 1621415 -  -3.5  -3.35813   CTCCAGGGTAAGGAA            GAGCCCT TCCATC AGAGCCC             CGTGGGGTGGTCCAG  49 17
Ththe16_1628 1620100 .. 1620131 - -10.8  -3.01712   TGGCCTCGGGGAAGA      GGTAGAGGAGGGCT TCCA AGCCCTCCTCCCGC       AGGCCGAGGCCCCGT  62 264
   TTMY_1980 1619662 .. 1619702 - -13.9  -3.21099   GGCTTCCACGACGAA  CCCCTCAAGGCCCACCCCG AGA CGGGGGAGCCCTTGAAGCG  GGTCATCACCCCGCC  70 214
   TTMY_1978 1618942 .. 1618961 -  -6.3  -4.07885   CATCGCGGTCCAAAA            GGGCCCC GCGCAT GGGGCCT             AGTCTAGCAGGCTCC  66 24
   TTMY_1977 1618231 .. 1618256 -    -4  -2.54634   GGGGAGACCATGAAG         GCCATGGAGAA GATGG TTCTCCG-GGC         GGGGGGCACGTGGTG  40 112
   TTMY_1975 NONE
   TTMY_1974 1615572 .. 1615599 -    -4  -3.53091   AGGTCCTGGTGGAAA        GGGTCCAGGG GGGCGAGG CCCTGGGCCA         CACCCCCGACTACTA  51 485
   TTMY_1971 NONE
    TT_C1256 1613211 .. 1613254 - -10.2  -3.14344   CACCCCGGGCATGAA GGCGAGCTCCGCCTCGAGGCC CAG GGCCTCCAGGATCAGCTC-CC TGAGCTCCCGGTCCC  62 17
   TTMY_1969 1612220 .. 1612259 - -15.6  -3.05844   CCGTGGAGGTGAAGA  CGGACGAGGCCAAGGCGG AGTT CCGCCACGGCATCCTCCG   GCTCACCCTCCCCAA  75 131
   TTMY_1967 1611060 .. 1611073 -  -2.3  -3.60296   TAGGGTGACGGGAAA               GACCC TCAT GGCTC                GGTGGGCAGGCCCTC  48 17
   TTMY_1966 NONE
   TTMY_1965 1609695 .. 1609705 -  -6.8  -3.53012   CCTGGCGGGGGTAAA                 GGAG ATC CTCC                 TTACGGCCCGCCTGG  58 49
         sip NONE
   TTMY_1960 NONE
   TTMY_1959 1603992 .. 1604024 -  -3.4  -2.91695   CGTACTCGCAAAGGA     GGAGGAGGCGCCG CACGCCCT CAG-GCCTCCTGC      CGGACCGGGGCGGCA  41 13
        truA 1603178 .. 1603205 - -21.4  -2.70932   TGGGGTGCTTAACTA        CCCCATGCTGGC TTGG GCCAGCATGGGG         GCCCTGGAAGAGGGC 100 66
   TTMY_1953 1597169 .. 1597195 -  -3.6  -3.06696   CCGTCCCCCAAGATA         CCATGCCCCC CTAAAGC GGGGTAATGG         CCTCCTGAAGGGGGG  44 9
   TTMY_1952 NONE
   TTMY_1951 NONE
   TTMY_1950 NONE
   TTMY_1949 NONE
   TTMY_1948 NONE
   TTMY_1947 1591662 .. 1591672 -  -6.8  -3.64487   GGAGATCGCCAAGAA                 GGTC TTT GACC                 CGAGGCCCCTCGCCA  59 272
   TTMY_1945 NONE
   TTMY_1944 1588660 .. 1588702 -  -5.9  -3.65046   GCGCTACGCCAAGAA GGCCCCGCCGCCCCCGCCC CCCCC GGGCCTCGCCCCCGGGGCC CTGGTGGAGGTGCCG  57 411
   TTMY_1928 NONE
   TTMY_1927 1575394 .. 1575408 -  -4.2  -3.14132   TTGTCCGCCCAGCAA               CCCCAA CCC TTGCGG               GCCTTACACCCGGGA  47 195
   TTMY_1921 1569895 .. 1569905 -  -4.6  -3.79113   AGCCCTGGAGAAGAA                 GGGC TTC ACCC                 TGAAGGAGTGAGACC  58 520
   TTMY_1886 1550875 .. 1550894 - -11.4  -3.80625   GCCGCATAAGCGAAA            CAAGGCCC TTTC GGGCCTCG             GTTTGGTGCCGGGGG  79 32
   TTMY_1885 1550199 .. 1550209 -  -8.2  -2.78384   GGGTGGCGGAGGAGA                 CGGG GGT CCCG                 TTTTACGTCATCAGC  51 245
   TTMY_1881 NONE
   TTMY_1880 1547558 .. 1547588 -   -16  -4.57073   GAGGCCCCCGAAAAA       GGCAGCCCCCCGGC CGG GCCGGGAGGCGGCA       AGCGGGCGCTTAGTT 100 35
   TTMY_1876 1544192 .. 1544217 -    -6  -3.57144   GCCTTCACGGGGAAA         CGGGGGTGGT ACCTGG ACCTCGCCCG          GGTGGCGGAGCACTG  53 423
        dnaJ 1541986 .. 1542008 - -19.2  -4.62783   GAGGCATGTGAAAAA           GGCCCTGGAC CGG GTCCAGGGCC           TTGGCCGTCCTATGG 100 42
   TTMY_1873 1541350 .. 1541363 -  -5.9  -3.83568   CTACATTGAGAAGAA               CCGCA AGCT CGCGG                GCCTAGAGTAAACGC  62 140
 TtJL18_0219 NONE
   TTMY_1866 1533898 .. 1533910 -  -6.9  -3.25823   CCGCTCCCAGATGAA                GCCCC TTT GGGAC                CCCGAGAAGGAGGCC  51 164
        lysR NONE
   TTMY_1861 1528242 .. 1528267 -  -6.7  -2.65264   CCACCACCCAGAGGA         GGAGGAGGAGGG CGT CCCGCCACC-CC         ACCCGCTCCCCTTGG  47 188
         ndk 1527646 .. 1527681 - -16.9  -3.13403   CTCCCCGGAGGAAGA    GGCCTGAGCGCCTCCG CCCCC CGG-GGCGCCCAAGCC    CGGGCGGGAGGAGGC  84 81
   TTMY_1856 1524839 .. 1524873 -  -4.9  -3.58522   ACCAGTAGGCGGAAA    GGCGCAGGAACCACGA GGGC CCGTGGCGCATG-GCC     CCAAGCCTACCAGAC  52 32
   TTMY_1855 NONE
   TTMY_1854 NONE
   TTMY_1853 1521521 .. 1521533 -  -9.1  -3.28712   CCGCGGCGCTTAGAA                GCGGA AGT TCCGC                ACGAACTCCATGATC  61 7
   TTMY_1849 1517614 .. 1517624 -  -2.4  -2.62263   ATGCCCTTTAGAGTA                 GCCC AAG GGCC                 TCGAGGGCGCGGCAC  38 7
   TTMY_1848 NONE
   TTMY_1847 1515330 .. 1515344 -  -2.7  -3.53091   AGGCGGTGCGGGAAA               GGGTC TTGAG GGCCC               GGGAGAGGATGCTCG  48 270
   TTMY_1842 1511177 .. 1511190 -  -2.3  -2.90075   TTCGGGGGAAGTATA               CCAGC GCGG GGTGG                GGCGTCCGTCCCTGG  40 59
   TTMY_1841 NONE
   TTMY_1840 NONE
   TTMY_1839 1508375 .. 1508387 -  -3.3  -3.60792   TCGTCAAGGCCTAAA                GCCTT TTC AGGGC                CTGGATGAGCTCGGT  49 8
   TTMY_1838 NONE
   TTMY_1837 1507226 .. 1507247 - -14.4  -4.54727   TCCGCTAAAGGAAAA           CCCGGGCC CCACAT GGCCCGGG            GGCACCCCGTAGGAC 100 46
   TTMY_1829 NONE
   TTMY_1828 NONE
   TTMY_1827 NONE
   TTMY_1826 1498195 .. 1498209 - -11.4  -2.78384   CTCCCCGGGAGTAGA               GGAGGC CTT GCCTCC               TCTCCCTCCACTCCC  62 53
   Rmar_2899 1495367 .. 1495381 -  -5.6  -3.15544   GTCTAGCCCGATCAA               GATGGC AGG GCCGTC               CCCTTCACTCCGCCA  49 30
   TTMY_1822 1494074 .. 1494101 - -14.9  -4.36595   GATGGAAACCCAAAA        CTCCCCGCCTC GGAAGT GAGGCGGGGAA         ACCCATTTATGGCAG 100 59
   TTMY_1811 1486751 .. 1486761 -  -2.4  -4.32034   CCACCATGACCAAAA                 GGGC CAA GGCC                 GCCTTCCCTACCCCC  65 33
   TTMY_1810 1486408 .. 1486419 -  -5.8  -4.07568   GGTCCTGCCCCAAAA                GCTG GAGC CAGC                 GGAGCTCACCGCGGG  65 133
   TTMY_1803 1480633 .. 1480673 -  -6.6  -3.76125   GGAGTGGAACGGAAA  GGTGGAGGCCATCCGGGG GGTAT CCCCGGCGCGCCTCAACG  CCTGGCTCGCCCGCT  62 39
   TTMY_1794 NONE
   TTMY_1793 NONE
   TTMY_1792 1475802 .. 1475823 -  -4.3  -3.31144   CGTCCAGGTCCAGAA           GGAGAAGCC TCAC GCCCCCTCC            CGCACCAGGACGGGG  49 13
   TTMY_1791 1474986 .. 1475043 - -12.6  -2.71731   CTTAGGGTTCAAGGA GGCCCAGGCC-CGGG-CCGTGGTCCTGG ACCT CCTGGCCCAAAACCCCAAGGCCCGGGCC CAGGACCTCATCAAG  63 47
   TTMY_1788 NONE
   TTMY_1787 NONE
   TTMY_1786 NONE
   TTMY_1785 NONE
   TTMY_1784 1468346 .. 1468368 - -12.7  -4.63007   CATAAGTATACAAAA           CCGGGGTGC TCTCC ACACCCCGG           CGTTGCCCGGTTCGC 100 40
   TTMY_1783 NONE
   TTMY_1782 NONE
   TTMY_1781 NONE
   TTMY_1780 1463585 .. 1463612 -  -6.9  -3.53012   CCCTCTCCCCCCAAA        CCCTCGTCCTC GGGGTG GAGCCCGAGGG         GGCGGAGGACGCCAA  56 387
  RLTM_00115 NONE
   TTMY_1774 NONE
   TTMY_1773 1456572 .. 1456584 -  -4.7  -3.31263   AGGGGAGGGTTATAA                GGGTG CGC CCCCC                GAACGCTGCCGCAGG  49 7
       groES NONE
   TTMY_1771 1454477 .. 1454503 - -26.6  -3.85698   CCTGGCCCTTAGAAA         GGGGCCGGGCCC TCG GGGCCCGGCCCC         TCTAGCCGCTAGGGC 100 41
        pilD NONE
   TTMY_1768 NONE
 TtJL18_2202 NONE
 TtJL18_2203 NONE
   TTMY_1765 1450098 .. 1450134 -  -4.2  -4.25104   CCCCTTCTACCAAAA    GGCCTACCGGGGAGCG AGGCG CGTTCTCCAGGAGGTC    ATGGCCAGTCCGGCA  65 24
   TTMY_1754 1438759 .. 1438769 -  -8.2  -2.74012   CTACGAGTTCAAGGA                 CCCC AAG GGGG                 CCACCCGCTACGACG  51 286
   TTMY_1752 NONE
   TTMY_1751 1437793 .. 1437836 -  -5.1   -4.4261   CGGGGAAGAGGAAAA GCTCCTCGCCCTAGGCGAGC TCCTC GCCCTCCGCGGGC-AGGAGG TGAGCCTGGCGCGCT  72 65
   TTMY_1749 NONE
   TTMY_1748 NONE
   TTMY_1747 NONE
   TTMY_1746 1436155 .. 1436176 -  -4.3  -5.47218   GGGCAGTCAAAAAAA           TGGAGCTCG CGGC CGGGCTCGA            ACCGGCGACCTCACC  95 5
   TTMY_1745 NONE
   TTMY_1744 NONE
   TTMY_1743 1434498 .. 1434508 -  -3.2  -2.59564   TGCTCATCGCAGAAG                 CCCT ATC AGGA                 AGCGGAAGACCGTGT  39 3
   TTMY_1742 NONE
   TTMY_1741 NONE
   TTMY_1740 1432752 .. 1432779 -    -4  -3.53012   TGGGCCGCCCCCAAA        GCCCCCCCTTCCC TCT AGGA-GTGGGGGT        TGATGCGCACGCTGG  51 12
   TTMY_1739 1432569 .. 1432588 -    -7  -5.75342   CCCTCGGAAAAAAAA            GACCCAGG GGGG CCGGGGCC             CCCCTTTTTGGCTCC 100 35
   TTMY_1738 NONE
   TTMY_1737 NONE
   TTMY_1736 NONE
   TTMY_1735 1430627 .. 1430651 - -20.7  -3.23853   CCTCGTCAAGGAAGA          CCCCCCGCCCC AAG GGGGCGGGGAG          GGGCCTAAGGGGTTT  87 45
   TTMY_1733 1429130 .. 1429151 -  -4.3  -3.30124   CGGGATGGGCCAGAA           GCCGGGGAA GCCA TTCCCTGCC            CTGCAAGCGCGCCCC  49 145
   TTMY_1732 1428066 .. 1428077 -  -7.2  -4.41494   CAGGCCCAAGGAAAA                CCCC TTTT GGGG                 CCCCCGCTCTGGCGC  75 58
   TTMY_1731 NONE
   TTMY_1730 1426001 .. 1426011 -  -2.4  -3.72576   CTTCTTTTTACCAAA                 GGCG AAG CCCC                 TTGGCGAGACCCCTT  51 62
   TTMY_1729 1424646 .. 1424664 -  -3.8  -3.01712   CGCCCCGGGGGAAGA            CGC-CCC TGGCCT GGGTGCG             GCCGCGGTACCGGTG  43 475
   TTMY_1721 NONE
   TTMY_1720 1418411 .. 1418424 -  -8.1  -3.38812   GGCTGGCCAAGAAGA               GGACG TTGG CGTCC                AAAAAGACCAACTCA  59 38
   TTMY_1719 NONE
   TTMY_1718 1417395 .. 1417407 -  -9.1  -3.53444   CCACCCTCTCGGAAA                GCCTC ATG GAGGC                GGCGGAGGCCTTCCA  61 68
   TTMY_1711 1411608 .. 1411626 -  -3.7  -3.15861   CACCAGCTTTACGAA             GGCCTCG TAGGT CATGGCC             GGTGGTAGGGGTGCC  45 18
   TTMY_1710 1410754 .. 1410781 - -14.8  -2.52464   CCCTCCTTTAACCCA        CCCCATGCGGGC TTGC GCCGGCACGGGG         GCCCCAGCCCCAGGG  71 474
   TTMY_1706 1407878 .. 1407909 -  -2.8  -3.53444   GGACCTCCCCGCAAA      CCTCCTCCGCTACC TGGA GCTCGTGGAGGAGC       ACACCGGGGTCCCCG  49 107
   TTMY_1699 1404263 .. 1404274 -  -7.2  -2.59431   CTCCTTCACAAGCTA                GCCC TGAC GGGC                 TGACCTTGGGTCTCG  47 4
Ththe16_1984 NONE
   TTMY_1697 1403140 .. 1403150 -  -8.2   -3.1994   GAGAGCAGGGATGAA                 GCCC TTA GGGC                 CTTGGAGGAGGTGAA  56 370
   TTMY_1695 1401729 .. 1401754 -  -8.3  -3.01791   ATGCGGCGGGGAAGA         GATGGTGGAGCA TGC TGC-CCACCGTC         TCCACCACCCTCCTA  55 170
   TTMY_1688 1396138 .. 1396148 -  -2.4  -3.66803   CGTCAAGATGGTAAA                 GGGC TGA GCTC                 TCATCACTTTCCTCC  51 29
   TTMY_1687 1394909 .. 1394925 -  -5.1   -3.3854   AACGAGCAGGCATAA              CCCCAGA GGA TCTAGAG              GTCATCGTGCAAAAG  53 417
   TTMY_1683 NONE
   TTMY_1682 1392045 .. 1392062 -  -2.6  -3.85698   CGCTTCCGGGACAAA             TGCCCT GGTTGA AGGGCC              CCCACTGCGGCTTTC  54 43
   TTMY_1681 1391253 .. 1391263 -  -2.4  -3.41878   GGGTGGAACGGAGAA                 GCCC CGA GGGG                 AAGAGGGAGGCGGTG  46 330
   TTMY_1677 1388801 .. 1388817 - -15.1  -3.06183   TCCAGCCCGAGGGAA              GGCGGGC CAT GCCCGCC              GCCGACTGGGCCCGG  71 43
   TTMY_1668 NONE
   TTMY_1667 NONE
   TTMY_1666 1379922 .. 1379932 -  -8.2  -3.53012   CCCTCCCCCCGGAAA                 GGGG AGG CCCC                 GTCCGCCTCGTCGTG  61 497
   TTMY_1661 1378236 .. 1378247 -  -2.2  -3.36515   CTTCACCGGGAAATA                GCCT CCAG AAGC                 CGCACCATCTCAATG  46 1
   TTMY_1657 NONE
   TTMY_1656 NONE
   TTMY_1655 1372915 .. 1372964 -  -7.7  -3.30124   CTTCAGCCGCGACAA GGACCACGCGGCCATGGCC GAGGCCCTGAGG GGCTTGGGCCCCGTGGTCC TCACCCGCTACGCCT  55 234
   TTMY_1650 1369030 .. 1369052 -  -3.3  -3.02144   GGAGGCGGGCGAAGA           GGCTCCGCA TGGCC TGAGGAGGC           TAGGGCTCGGCGTAA  42 25
   TTMY_1649 1368396 .. 1368408 -  -7.7  -2.80816   CTGGGAGGGAGTATA                CCAGT CGC ACTGG                AGGAACTTGCTGGAG  52 309
   TTMY_1647 1366534 .. 1366549 -    -6  -3.14132   CGGGGCCCTGATGAA              CGCGGG GATC CCCGTG               GCCGTGGCCCTGGCC  49 260
   TTMY_1644 NONE
   TTMY_1643 1361806 .. 1361844 -  -2.9  -3.02511   GGGACTCGGTGAAGA  CCGTGCCCCCCGCCATCG CCAG CTTCGGCGGGGC-CACGC   CCTTTGAGATCCCTT  41 160
   TTMY_1638 1357334 .. 1357351 - -14.1    -4.371   TCCATGATAGGAAAA             GCCCCCC AACT GGGGGGC              TTTAGGGGCAGTCCT 100 45
        surE NONE
   TTMY_1636 NONE
   TTMY_1635 NONE
   TTMY_1634 NONE
   TTMY_1633 NONE
        gatB NONE
   TTMY_1631 NONE
   TTMY_1630 1348309 .. 1348334 -  -7.5  -3.78067   AACACGGAAGTGAAA         CGCGCCAGCGCC GAT GGTACTGG-GCG         GGCGACCGCCTGGGA  65 183
   TTMY_1623 1343576 .. 1343586 -  -2.4  -3.40522   AGGCGGCGACGAGAA                 GGGC GAG GGCC                 ATAAGGTACCGCTTC  46 86
   TTMY_1622 NONE
   TTMY_1621 NONE
   TTMY_1620 1340338 .. 1340350 -  -4.7  -3.31144   CCTCTACCCCCAGAA                GGCGC AGG GAGCC                GGGGAGGATGCGGCC  49 178
   TTMY_1618 1339499 .. 1339523 -    -7  -3.21099   CCGGGGGACGACGAA          CCTCATCCGC GTGGA GCGGGTGGGG          TAGCTACCGGGGTAG  52 29
   TTMY_1613 1332204 .. 1332214 -  -8.2  -2.84325   TCCCGTGAAACATCA                 GGCG CCC CGCC                 GCAGGTGGACGGCCA  54 12
        gidB NONE
   TTMY_1611 NONE
   TTMY_1610 1329614 .. 1329628 -  -5.6  -3.47322   GGGGACGACAACCAA               GACGGC CTC GCCCTC               CTCCTGGACTTCGGC  53 313
   TTMY_1606 1326368 .. 1326382 -  -2.7  -3.56366   AATAAGTCTTGGAAA               GGTCC TTTTG GGGCC               CCAACCGCGGCTTTC  49 56
   TTMY_1605 NONE
   TTMY_1604 NONE
   TTMY_1603 1323498 .. 1323512 -  -4.2  -3.53091   AGGGCCCCGGCCAAA               GGCC CCCGGTT GGCC               GGGCGAAGGAACCCG  51 507
   TTMY_1598 NONE
   TTMY_1597 1318216 .. 1318227 -  -5.8  -4.28049   GGGAAAAGCCCAAAA                GCCT TCCC AGGC                 CCAACCCCCAGGGGA  69 495
   TTMY_1591 NONE
   TTMY_1590 NONE
   TTMY_1589 1312644 .. 1312669 -  -3.1  -4.07687   AGCCCTTCGCCAAAA         GGTCCAGGAGG AGCC CCACCTCCACC          CCCACCACCTCCCCC  59 72
   TTMY_1588 NONE
   TTMY_1587 1311949 .. 1311970 -  -4.3  -3.04144   GGGTGACGGGGAACA           TCCTCAAGG AGTT CCTAGAGGT            GTGGCGTGAAGCGCA  45 329
   TTMY_1581 NONE
   TTMY_1580 NONE
    CLI_0584 1308239 .. 1308270 - -11.4  -2.70932   CTTGGGCCCCAAGGA      GGCCCCCGAGGGGC TCAA GACCCTCTGGCGCC       GCACCACCCTCCTTA  60 503
   TTMY_1577 NONE
   TTMY_1576 1306227 .. 1306239 -  -4.7  -3.00525   TTTCCTCAAACCAGA                GGCCC ATG GGGGC                ATTATATAACTCCTA  45 123
   TTMY_1575 1304998 .. 1305045 -  -8.9  -3.31144   TCCCCACCTCCATAA GGTGGAGCCGGGGGCAGGACG TGGGGG CGGCCTGCGGCCAGCTCGCCC TGAAGGTCCCCCGGC  58 50
   TTMY_1573 NONE
   TTMY_1572 1301900 .. 1301934 -  -3.5  -3.58533   TGATAACTTGGGAAA    GGGGGGT-GGT-GGGCG GCA CACCTTACTTACCCCCC    TCTTCTCTTCCCTTG  51 109
   TTMY_1571 NONE
   TTMY_1570 1300778 .. 1300792 -  -4.9  -4.07568   TCCCTCTCGTGAAAA               GGGGC GCAAG ACCCC               ACCCCACCACTATAC  62 55
   TTMY_1569 NONE
   TTMY_1568 NONE
   TTMY_1567 NONE
   TTMY_1566 1297579 .. 1297602 - -19.6  -4.09739   GGAAGGTGCGCAAAA          CCCCCACCGC GGCC GCGGTGGGGG           CGAAGGCGGGTAGGG 100 42
   TTMY_1561 1293057 .. 1293086 -  -7.9  -3.53343   AAGGCGTGCGGGAAA       GGCGCCTGGAAG CCCTCCT CCTCCAGGC-CC       TGAAAGGGGAGCGCA  58 166
   TTMY_1559 1292880 .. 1292912 - -22.1  -2.74263   ATTCTAGGGGTAAAG      CAAAGCCCCCTGGGA GAA CCCCAGGGGGCTTCG      GCCTTTGGCGGGCCC 100 33
   TTMY_1558 NONE
   TTMY_1557 1292049 .. 1292102 - -14.6  -4.19238   GGGTGAAGCCCAAAA GCTCCATAGAGG-CCCTGCCCGAGGC CCAG GCCCTGGTCCGGGACCTCT-TGGAGC TTTTCTACGAGTACT  95 219
   TTMY_1555 NONE
   TTMY_1554 1290037 .. 1290078 -  -2.8  -2.62616   CGAGGCGGGAGACCA CCCCCACCCTCACCAGCGA GACCA TCG-TGGAGTGGGACGAGG AATTCTGAAGGGGCC  39 40
   TTMY_1551 NONE
   TTMY_1550 NONE
   TTMY_1549 1287482 .. 1287497 - -10.4   -5.0133   GAGCCGCGGAAAAAA              CACCCC CGAA GGGGTG               TTTCTGGTGACCCCA 100 31
   TTMY_1548 1286366 .. 1286382 -  -3.5  -3.58533   CGAGAAGCGCCCAAA              GGCGCGC CAC GTCCGCC              TAGCCCTTGACCTTT  51 25
   TTMY_1547 1285141 .. 1285157 -  -6.5  -3.58522   ACCACCACCCGGAAA              GGCGC GTCCACG GCGCC              ATTCTACCGGCCCAA  56 29
   TTMY_1546 NONE
   TTMY_1545 1283417 .. 1283429 -  -4.7  -3.42354   CACCCTAAGGGAGAA                GGGCG GGG CGCGC                TAGCGGTAGAGCTCT  51 25
   TTMY_1544 1282481 .. 1282500 - -16.4  -5.07652   CTCCCCAAAAGAAAA            CCGGCCCG AACT CGGGCCGG             GGGATAAGGAACCCT 100 127
   TTMY_1543 1281006 .. 1281026 -  -6.7  -3.53091   ACTCCTTCGGCCAAA            GCCCCGAGG AAG CCTTGGCGC            GGGCCAAAGAAGCCT  56 328
   TTMY_1540 NONE
   TTMY_1539 NONE
   TTMY_1538 NONE
   TTMY_1537 1278576 .. 1278587 -  -3.6  -3.03124   GTTGATTTCGCAACA                CGGG CCGC CCCA                 AATAAGGCTTGGGAA  44 107
   TTMY_1536 NONE
    TTHA1906 NONE
   TTMY_1534 NONE
   TTMY_1533 NONE
   TTMY_1532 NONE
   TTMY_1531 NONE
   TTMY_1530 NONE
   TTMY_1529 1272134 .. 1272147 -  -2.3  -3.28712   CCTTGCGCGCCATAA               GGCCT CCTA AGGGC                GGTAGTCCAAGGGCC  44 18
   TTMY_1528 NONE
   TTMY_1527 NONE
   TTMY_1526 1270034 .. 1270048 -  -3.5  -3.15861   GAGGAGTGGGAGGAA               GAGAC CTTCC GCCTC               AAGCGCCTGGAGGGG  45 56
   TTMY_1522 1263973 .. 1263999 - -22.3  -5.06414   GGGGGGTAACAAAAA         CCCCCGCCCCC TTTGG GGGGGCGGGGG         AAGGCGCTCCTAGGG 100 42
   TTMY_1521 1261407 .. 1261446 - -12.3  -3.28712   CCCCCGGCCCCAGAA CCCCTTCC-CC-CCTG-GCC CCA GGCCCAGGCGGAGGAAGGGA TCGCGGCGGTCCCCG  67 495
   TTMY_1519 1259308 .. 1259322 -  -3.5  -4.11394   AGGGCACGCTGAAAA               GCCTC CTCCT AAGGC               CCCTCTCCCGGATCC  61 515
   TTMY_1514 NONE
   TTMY_1513 1255228 .. 1255261 -  -7.9  -4.07568   CGCCGCCTGGCAAAA     GGCCCAGGAGGCGGC GGAG GCCCACCCCGAGGCC      GAGGTCCCCCTAAAC  69 216
   TTMY_1511 1253294 .. 1253318 - -16.4   -4.5852   GAAGGCAAAGGAAAA          CCGGGGGCGG CCTCC CCACCCCCGG          GCCCCCTTTAGGCCT 100 224
   TTMY_1510 NONE
   TTMY_1509 NONE
   TTMY_1508 NONE
        folE NONE
        thrS NONE
        thrS NONE
   TTMY_1504 1247785 .. 1247817 -  -6.2  -2.64616   GGGCCAGGGAGAGGA     TGGGCAGAAGGGCGG AAAA CC-CCCTCATGCCCC      TAAGCCTACCGGGAA  46 31
   TTMY_1503 1246967 .. 1246988 -    -8   -2.5955   AGGGGGTAGAAGTCA           CCCTCCTGG TGTAC CCAGG-GGG           TCGGGATCCCTGGTA  50 370
   TTMY_1500 NONE
   TTMY_1499 1243824 .. 1243875 -  -3.5  -2.90075   CCCGGGGGAAGGAGA CGGAGGCGGGCTGGC-GGCCCC TTAAGGCCG AGGGCGAGCCCCTCCACCTCCG GGTGCGAAGCCCCAC  42 432
   TTMY_1496 NONE
   TTMY_1495 NONE
   TTMY_1494 1241864 .. 1241901 -  -3.1  -3.23216   GCGGACCACCACGAA   GGCGTCCACGGGCGGGG CCTC CCCCGGAAGCGGACGTA    GCGGAGGACGGGGGT  46 61
   TTMY_1493 NONE
   TTMY_1492 NONE
   TTMY_1491 1239981 .. 1240013 -  -6.8  -3.01712   GGGTCCTCTTCAAGA     CCCCCTTCGGCCTCC GCCT GCGGGCCGT-GGGGG      AGCACCCCGAGGCCG  49 399
   TTMY_1487 1236514 .. 1236538 -  -5.7  -3.35679   CCTCTGCACCCACAA          CTCCGCC CGAAGCCAGAT GGCGGAG          GCCTGGCTCCGCCAC  51 421
   TTMY_1483 NONE
   TTMY_1482 1232596 .. 1232617 - -12.9  -4.85782   TCCCCCAAAAACAAA           GCCCCGGGG TGTG CCCCGGGGA            AAGGCCTCCCGCCCC 100 121
   TTMY_1481 NONE
   TTMY_1480 NONE
   TTMY_1479 NONE
   TTMY_1478 1229327 .. 1229360 -  -5.9  -4.91109   GCCCGAGCACAAAAA     GCCCATCCTCCTCCTT TAC ACGGGGGAGGA-GGTC     TTTGCCTTGGAGGAC  86 217
   TTMY_1465 1215152 .. 1215170 -  -2.3  -4.11216   GGGCCACCGCCAAAA             GGCTTAG GAGGA CCATGCC             CCCATTCTAGGGGAG  58 32
   TTMY_1464 NONE
   TTMY_1463 NONE
   TTMY_1462 1212795 .. 1212822 -  -6.2  -4.11394   AGGCCATCCCCAAAA        CCCTCCTCG-AGG CCG CCTACGTGGACGG        GGCCGGGCCTTGGGA  67 302
   TTMY_1459 NONE
   TTMY_1458 1209607 .. 1209648 - -12.3  -3.87373   CACATCCGGGAGAAA GGCCTCCTTTGGGGCG-TGG TGA CCAACGCCCCCAAGGAAAAC GCCCGCCACGTCCTC  78 302
   TTMY_1455 NONE
   TTMY_1454 1205969 .. 1206013 - -12.8  -4.07568   CCTCCTCGCCCAAAA GC-TCCTCCACCCCGGCGCGA AGCC CCTCGGCGAGGCGGAGGAAGC CTTCGGCCTCCGCCT  83 310
   TTMY_1453 NONE
   TTMY_1452 1204726 .. 1204740 -  -2.8  -3.32268   GAACCAGGTCCAGAA               GGGA CATCTAC TCCC               CCTCGTCCTCGCCTG  46 18
   TTMY_1451 NONE
        mreB NONE
   TTMY_1449 1201272 .. 1201300 -  -5.7  -4.08216   CCACCTCGCCCAAAA        CCTCCCCCAGGTC GGC GGGCGGGGGGCGG        TCCAGGAGGACCACC  64 249
   TTMY_1448 1200711 .. 1200721 -  -8.2  -3.35813   CGTCACCTCAAGGAA                 GGCG GGC CGCC                 CGAGGTAAGCTAACA  60 188
   TTMY_1447 NONE
   TTMY_1446 1192689 .. 1192711 - -17.7  -5.02074   TTATGCCGGAAAAAA           GGCCCCCGG GAAAA CCGGGGGCC           TCCACCTTGCGGGGC 100 45
   TTMY_1445 1192056 .. 1192071 -  -3.2  -3.14132   CTTCCCCTCCACGAA              GAGGAC CCTC ATCCCC               CACCCCCCAAGGCGG  44 18
   TTMY_1444 NONE
   TTMY_1443 NONE
   TTMY_1442 1189471 .. 1189494 -  -7.3  -4.37886   CCAGGTTGTAGAAAA          GGGCGGCCC AGTAGA GGACGGCCC           GGGTGCCGTAGAGGT  75 378
   TTMY_1441 1188191 .. 1188202 -  -2.2  -3.72576   CCCTCTCGGACCAAA                GCTA CCGC CAGC                 CCGACGGCCTCCCCG  51 174
   TTMY_1435 1186119 .. 1186140 -  -2.8  -4.25104   CCGCCTGGACCAAAA           GGCCCTGG AGGACA CCCTGGCC            CACGCGCGAAGCCTC  64 63
   TTMY_1433 NONE
   TTMY_1432 1182966 .. 1182989 -    -3  -3.97947   CGGATCCACGAGAAA          GCCCTGAAGG AGCA CCCCGAAGGC           TTCTCCCCCCAGGTG  59 402
   TTMY_1426 1179056 .. 1179068 - -10.5  -3.16564   CCTCGAGGCCATGAA                GCGGG AGG CCCGC                CTCCTCGGCCTGGAG  62 464
   TTMY_1423 NONE
   TTMY_1422 NONE
   TTMY_1421 1176518 .. 1176553 -  -4.4  -4.20696   GGAGGAAGGGGAAAA    GGCCGCCCTTCCCTCC CCTT GGCCCGCAGGCCGGCC     CCCGGAGGCGGTGCG  67 457
  FOXB_16443 1175257 .. 1175268 -  -7.2  -2.59748   TACCGCTACAAGGTA                GCCC TTCC GGGC                 TGACGGGCCCGGCGC  47 433
   TTMY_1416 NONE
    TT_C0577 1174007 .. 1174021 -  -2.1  -3.86015   GAGGCGGCTTACAAA              GAGAGC CGGA GC-CTC               AACACCCTAGTTCTT  55 503
   TTMY_1409 1164205 .. 1164221 -  -5.7   -3.7108   AGCCGTACACGTAAA              GCCACCG GTA CCGCGGC              CGCACCCAGGCCAGG  57 147
   TTMY_1408 1163816 .. 1163836 -  -2.5  -3.30635   GAAACCCGGGTATAA            GACCCAC TCCGATT ATGGGCC            CGGTCGTTTTGACCG  44 82
    PTH_1903 1162931 .. 1162965 - -13.7   -2.7263   ATGAGGGTTTGAAAC    CGCCTA--CCCCTCGGC CTC GCCGAGGGGCTTAAGCG    CCCCTTTTGACCGTA  69 378
  TSC_c16880 1160941 .. 1160999 - -10.6   -3.9712   GGAGTGGACGACAAA CCCCGCCGCCTCGAGGCGGCGCTTCACCT CCCGGT AGG-GAAGCG--GCCT-AAG-CGGCGGGG CCAAGCTCCACCTCT  79 13
LEP1GSC186_0075 1160604 .. 1160616 - -10.5  -2.52464   CTCTTTTGGAACCTA                GCCCC TTC GGGGC                TGACCCGTTGGGCTA  56 185
        secG 1159589 .. 1159614 -  -4.5  -4.08216   CCAGGGCCGCGAAAA         CCACCCCCAGG ATCA CCGTGAGGCGG          TAGAGCCCTCCCGTC  62 39
   TTMY_1398 1159412 .. 1159427 - -11.8  -4.28432   AACCGCAAGCTAAAA              CCCCCC TTTC GGGGGG               TGTTTTGGTGGAGCC  91 32
   TTMY_1397 NONE
   TTMY_1396 1158763 .. 1158784 -  -7.3  -2.73875   CGTCTTGGAACATTA           CGCCCGCTTA AGC CAAG-GGGCG           CACGTGAACGTACCG  48 11
        obgE 1157432 .. 1157460 -  -4.6  -4.11216   GGTCCAGGCGCAAAA        CCTCCTGG GCTTGGCTTGCCG CCAGGAGG        TGACCCAGGTGGATG  62 75
   TTMY_1394 NONE
   TTMY_1393 1156416 .. 1156431 -  -4.6  -2.96963   GAGGAGGAAGAAGGA              GAGGCG GGGA CGCATC               AGAGGCTGTGGTAGA  45 24
   TTMY_1392 NONE
   TTMY_1391 1154990 .. 1155002 -  -4.7  -3.64703   GCCGGGGTACTTAAA                GCCGC TCG GCGTC                GGCCCAGAAGCCCTC  55 8
   TTMY_1389 NONE
   TTMY_1388 1152581 .. 1152593 -  -3.3  -2.78384   TCCCGCCCGATTATA                CCCCC TCT GGAAG                CGTGGAACGGCCCCA  40 127
   TTMY_1387 1151278 .. 1151307 -  -3.3  -4.07568   TCCTCCGGCCCAAAA       GCTATGGGGAGGG GCTT CCCACCCCCGAGG        ACGTACTCCTCCTGG  61 359
   TTMY_1385 NONE
   TTMY_1384 NONE
   TTMY_1383 NONE
   TTMY_1382 NONE
   TTMY_1381 NONE
   TTMY_1380 1146511 .. 1146542 -  -6.6  -4.07568   CCTTCCCTGTGAAAA      CCCTGAGGGAC-CTG GCC CAACGTCCCTTAAGG      CTCGGCAAAGACGCC  66 20
   TTMY_1379 1144789 .. 1144807 -  -4.4  -4.27316   GTCCCTAACGCAAAA             GGGCCGCC CGG GAAGACCC             GAAAGCGGCCTCTTC  66 64
        htpG 1143961 .. 1143989 -    -6  -4.66833   GCCCAAGGCCAAAAA       CCCCCTCCGGGTC ACGG GACC-GAAGGGAA        ACTCCTCCCGGAAAA  78 8
   TTMY_1377 NONE
   TTMY_1376 NONE
   TTMY_1375 1139522 .. 1139566 -  -4.2  -3.57263   AGCCGCATCCGGAAA GGAGAAGG-GCGAGCAGGAGAA GGC TACGCACGC-CGCACCTCCTCC ACCTCCGCCCCTAAG  51 4
   TTMY_1374 NONE
   TTMY_1373 NONE
   TTMY_1372 NONE
   TTMY_1371 1136179 .. 1136206 - -20.6  -2.71011   ACCCTGGCCTAAGCA        CCCCACCGCAGC GAAA GCCGCGGTGGGG         GCCCCAGGAAGGGCT  95 39
  RLTM_09708 1131763 .. 1131777 -  -2.8  -3.63627   CCCCTACAGGGGAAA               GACC AGGGTGA GGTC               CAGGAGGTTATACAC  53 104
   TTMY_1364 NONE
   TTMY_1363 NONE
   TTMY_1362 NONE
   TTMY_1361 NONE
   TTMY_1360 NONE
   TTMY_1359 NONE
   TTMY_1358 1126539 .. 1126565 - -10.7  -3.60627   CTACTCTACGGCAAA         CCCCCTGGGAG GACAA CGCCCCGGGGG         AGCCTTCCTCAGCCT  70 34
   TTMY_1357 NONE
   TTMY_1356 1125064 .. 1125076 - -10.5  -2.50016   GTGGAGGAGGAAGAG                GGCGG GTA CCGCC                TCACCGCCACCCTCT  56 151
TaqDRAFT_3001 NONE
   TTMY_1352 1122414 .. 1122434 - -18.3  -5.40072   CGGCGGGGAAAAAAA            GCACCCCCC CAA GGGGGGTGC            GCTGCCAGCGGAGCG 100 85
   TTMY_1351 NONE
   TTMY_1350 NONE
   TTMY_1349 1119694 .. 1119707 -  -2.3  -2.57564   TCACCTGGCCATAAG               GCTCT CCGG AGGGC                AAGGTCTTCTGCAGG  38 509
   TTMY_1347 1118986 .. 1118999 -  -4.5  -2.62983   GCCACCCTCATAGGA               GGAAG ACCA CCTCC                CAGGCCTCGTACCAG  42 4
   TTMY_1346 1117954 .. 1117979 -  -2.5  -3.14132   GGCTGGTCCGAGGAA         GCCCCTTGAAAA CCC TTTGCC-GGGGC         CCCCATGCCGGCGCA  42 59
   TTMY_1345 1116995 .. 1117024 -  -9.2  -3.33696   CGGGTCCTGAAGGAA       GGGGTGGGCTTC CTGCCC GAAGCCCTCCTC        CCAAGCCACCTGGGC  58 364
        WHP1 1111166 .. 1111187 -  -7.9  -4.37092   AGGCGGCTCAGAAAA           CCCTCGCCC CCGT GGCCGAGGA            GGCCCGCACCAGGCT  76 100
   TTMY_1334 NONE
   TTMY_1333 1108673 .. 1108683 -  -8.2  -3.21395   AGGTTCTGGAGAAGA                 GGGG CAT CCCC                 CTAGAGTGGATAGAG  56 438
        curD 1095611 .. 1095622 -  -7.2  -3.14931   CTCACGGTCCAGGAA                GGGG CCGA CCCC                 ACGGTGGCCCAGGAC  54 253
   TTMY_1316 1094843 .. 1094878 -    -6  -4.18494   GACCGGGAGGTAAAA    GCCCCCCTCTACGCCCG GCA CGGG-GTCCAGGAGGTC    TGGGTGGTGGACCTC  69 222
   TTMY_1312 1091889 .. 1091916 - -24.2  -2.70932   GGCCCCGTCTAAGTA        CCCCACCGCGGC TTTC GCCGCGGTGGGG         GCCCCAAAAGGACCT 100 135
   TTMY_1311 NONE
   TTMY_1310 NONE
   TTMY_1309 NONE
  Theos_0069 1088474 .. 1088498 -  -2.7  -3.56092   CTACTATGCGGCAAA          GCCCCCCGCTT GTC AAGGGCGGAAC          CAGGCCAAAAGAAAC  49 13
   TTMY_1307 NONE
   TTMY_1306 1088220 .. 1088251 - -12.2  -4.42788   CCCAAGGGTACAAAA      GGAAAGGCCCGGGG CGTC CCCCGGGCCCTTTG       GCGGAGAGGGCGGGA 100 27
   TTMY_1305 1087168 .. 1087178 -  -6.8  -3.21276   TCGCCGTGCACAACA                 TCCC CGA GGGA                 CTCGCCATCAGCCTC  51 384
   TTMY_1301 1085258 .. 1085283 -  -3.9  -3.28712   GGTCCTCCTCCATAA         GCCTCACCCTCC CTT GGAGGTTC-GGC         CGGGGACGGACCTCG  47 3
   TTMY_1300 NONE
TCCBUS3UF1_3200 NONE
   TTMY_1298 1083752 .. 1083793 -  -9.9   -3.1355   GCCAGGGATAGGTAA CGACTTCCCCCACCGGGGC TTTC GCCGCGGTGGGGGCCTCCA  AAACCCCGCCCTCGT  62 62
   TTMY_1297 1083164 .. 1083187 -    -6   -3.9461   CGCCTGGAAGAAGAA          GCCCTT-AGGG TGG CCCTGAAGGTC          AAGCTCACCTTGGAC  63 172
   TTMY_1291 1079780 .. 1079808 -  -4.6  -4.34402   TCTGCCACACGAAAA       GGAG-GGGGAG-AG CCA CTACTCCCCGCTCT       CGTGTGCACAAGCCC  69 107
   TTMY_1290 1078087 .. 1078116 - -22.9  -3.83026   CGCTTCCACACGAAA       GCCCCGCGCCGGA CTTT TCCAGCGCGGGGC        CTGGGAAAGGGTCTT 100 39
        leuS 1074972 .. 1074982 -  -4.6  -3.55444   GGTGGACGCCCTAAA                 CCCC GTA GAGG                 TGGCGGTCCTGGAGG  51 365
   TTMY_1284 1069838 .. 1069855 -  -7.7  -3.85698   GGGTGGCCTCAGAAA             GCCCGCAG GTA CTG-GGGC             GGAATCGGGGCCTCC  66 1
   TTMY_1280 1067373 .. 1067387 -  -3.4  -3.08679   CGGGCTTAGGGAAGA               CGGCGC ACC GCGCAA               GGCGTGGTCACATGA  44 104
   TTMY_1279 1065482 .. 1065503 - -18.7  -3.76125   TGAGTCTAAGGGAAA           GCCCCGGCC TTTG GGCCGGGGC            CACCCTGGGGAGGGC 100 288
   TTMY_1278 NONE
Ththe16_0237 1064753 .. 1064775 -  -6.8  -4.26076   GGAGGGGGAGGAAAA           GGCCCTCTAC ACC GCCGTGGGCC           TAGGGGGCGAGGACC  71 25
   TTMY_1275 1062821 .. 1062840 - -10.6  -4.07885   CACGGGCCCCCAAAA            GGCCGGGG TAAG CCCGGGCC             ATACCCCTTCAGAGC  81 34
   TTMY_1274 NONE
   TTMY_1273 NONE
   TTMY_1272 1060411 .. 1060421 -  -6.8  -4.12188   CCACGACCCGGAAAA                 CGTC CTG GACG                 GGGACCTCATGGACC  67 113
   TTMY_1270 1058775 .. 1058794 -  -8.6   -3.6608   AGCACCTCACGGAAA            GGCT-CCAG GCC CTGGGAGCC            CGGGTGCACCTCCGG  65 113
   TTMY_1267 1057193 .. 1057218 -  -4.5  -4.07568   CGGGGGCCCCGAAAA         GGCCTGGCCGC AAAG GCCCTCAGGCC          TCTTCCTCGCCTTCC  62 19
   TTMY_1266 NONE
   TTMY_1265 1054933 .. 1054956 -  -4.5  -5.24129   CCCTTGCAGAAAAAA          GTGCCCCTA CTCGGC CAGGGCCAC           GCAGGCCACCTCCAC  86 8
   TTMY_1264 NONE
   TTMY_1263 1053547 .. 1053559 -  -4.7  -3.78329   GCGCAGGAAGCGAAA                GGGGC AAA GGCCC                ACCCGGCGCGTGGTC  58 413
   TTMY_1257 NONE
   TTMY_1256 1050137 .. 1050154 -  -4.7  -4.15044   CGCCCGGGGAAGAAA             GGGCCCC CTAA AGCGCCC              GGCGGATGGCCTCGG  62 15
   TTMY_1254 1048674 .. 1048696 -    -4  -3.73144   AGAGGAGGAAGAGAA           GGCGCACGCC CAT AGCCTACACC           CTGGGCAGGGTGATG  54 19
   TTMY_1253 1048009 .. 1048031 -  -9.8  -3.01712   CGTGGCGCCGGAAGA           GGTGCTGGAG CTT CCCCACCACC           TCGGCCTTGAGCCTG  60 78
   TTMY_1252 NONE
        hisG NONE
   TTMY_1250 1045710 .. 1045722 -  -2.6  -4.41895   AAGGGCCAAGGAAAA                CCCG GGGGA CGAG                GAGGCCTGGGGGGAG  67 114
   TTMY_1245 1042351 .. 1042367 -  -7.9  -4.25104   CCTCCTGCAGGAAAA              GGGGGAG ACC CTCCCCG              AGGCCCTGGCCACGG  74 145
   TTMY_1243 1040440 .. 1040450 -  -2.4   -2.6563   GCGGGGAAGAAGCCA                 GGGC ATA GGCC                 TATGCTACTCCCCAA  38 65
   TTMY_1242 NONE
   TTMY_1241 1039370 .. 1039387 -  -9.1  -4.08767   TCCATGCCGCTAAAA             GGCTAGC ACAA GCCAGCC              CTCGGGACCCGGGAC  75 80
   TTMY_1240 1038133 .. 1038155 - -11.3  -3.57263   ATTTTTACCGGGAAA          GGC-TCCCCG AAGC CGGGGATGCC           CTCTTGGTGGTGGAG  66 252
        proS NONE
   TTMY_1236 1035105 .. 1035157 - -19.7  -3.63837   AGAAGCTTTCAAGAA GGCGCAATCCCCCACCCCGCCCGTC CGG GACTGGCGAGAGGGGAGAAGGCGCC GAGAAGCTTAGTACG 100 33
OXYTRI_10640 1034254 .. 1034267 -  -5.2  -3.34013   CAGTCCCCCAAGGAA               GCGG TGGAAT CCGC                CCTCAAGGCCGCCTT  51 422
   TTMY_1233 1033050 .. 1033063 -  -3.7  -3.53761   GAACCTCCCGGGAAA               GGCCC CCTA GGTCC                AGGTGGCTCCGGTAG  51 18
   TTMY_1232 1032085 .. 1032099 -  -5.6   -3.6608   ATGAGGGGATGGAAA               GGCCCA AGC TCGGCC               TCATCGTCCGGGAGC  57 335
   TTMY_1230 1031389 .. 1031399 -  -8.2  -4.56597   GGGTTTCTCCAAAAA                 GGGC CCG GCCC                 CCTAGGCCTGGCGGC  81 27
   TTMY_1229 NONE
   TTMY_1228 NONE
   TTMY_1227 1028977 .. 1028990 -  -3.7  -4.07687   ACCTGCGCCCGAAAA               GGGAG GTAG CGCCC                GTAAACCTTCCCAGC  61 49
        cshA 1027257 .. 1027287 -  -8.9  -3.25072   CGCACCAGAACGTAA      CCCTCCCGCCCACG CTTC CGTGGGCGGG-GCC       TTTTTTACGGCAAAC  58 82
  RLTM_01755 1026681 .. 1026700 -    -2  -3.28712   CGTTTGGGTGGATAA            GCTGAACC TTGC GCATCAGC             CGGATCGCGCGTACG  44 70
  RLTM_01760 NONE
  RLTM_01765 NONE
  RLTM_01770 NONE
  RLTM_01775 1023403 .. 1023429 -   -13  -4.42386   CCTGGACGGAGAAAA         TCCCGTAGCCAC AGG GTGGCTACGGAG         TGGCTATTGTGGCTA 100 209
  RLTM_01780 NONE
  RLTM_01785 NONE
  RLTM_01790 1021022 .. 1021046 -  -9.2  -3.40403   CGTGGTGGAGTACAA          GGGGGCGCAC CTGGC GCACACCCCC          GAGACCTACGAGAAG  58 275
   TTMY_1215 1017021 .. 1017031 -  -4.6   -4.4078   GGTGCTCAAGCAAAA                 CGCC GAG GACG                 GGGGCAACCGGCGCT  70 353
TaqDRAFT_4249 NONE
TaqDRAFT_4250 1013948 .. 1013982 -  -2.2  -3.65046   GGGGGACTGGAAGAA   GCT-CTGG-AG-GGCGG CCAT CCGCCACTACCAGCAGA    AGGTGGCCTGGGGAG  51 199
TaqDRAFT_3238 NONE
   TTMY_1209 1011747 .. 1011777 -  -8.9  -3.10894   AGCACCAGGACGCAA      TCCTCCCGCCCACG GAAG CGTGGGCGGG-GCC       TTTTTTACCCCCATG  56 80
   TTMY_1207 NONE
   TTMY_1206 NONE
   TTMY_1205 1008116 .. 1008149 -  -9.3  -3.53811   CCCACCGCGGCGAAA     GCCGCGGTGGGGTGC TTAA GCTCACGGCCGCGGC      CAGGGCCCACACGGA  64 335
   TTMY_1202 NONE
   TTMY_1201 NONE
   TTMY_1200 1006213 .. 1006232 -  -5.6  -3.53012   TCCCCCCGCCCCAAA            GGCTCCGCC AGC GCCGG-GCC            TCCCCTTGGGCGTCC  54 295
   TTMY_1199 NONE
   TTMY_1198 NONE
   TTMY_1197 1004445 .. 1004461 -  -7.9  -3.75153   CCTGGCGAAGCCAAA              GGGCGAG GCG CTCGGCC              AAATCCCCCTGGAGG  65 383
   TTMY_1195 NONE
   TTMY_1194 NONE
   TTMY_1193 NONE
   TTMY_1192 1001337 .. 1001354 -  -2.5  -3.07816   TCTCCATTCACGGAA             GCCCGGC CTTC GCCGCCC              GGTACTCCTCCACCA  41 0
   TTMY_1191 NONE
   TTMY_1190 1000201 .. 1000211 -  -8.2  -3.53224   GAGGCCGCCCTCAAA                 GCCC TCC GGGC                 GCGGGGGCTTCTCTG  62 10
   TTMY_1167 NONE
   TTMY_1166 NONE
   TTMY_1165  978803 ..  978816 -  -9.5   -3.6682   GGGTACTTAGCCAAA               GGCCC CCGG GGGCC                GCAATCCCTTGTGCC  68 3
  RLTM_01980  978445 ..  978458 -  -5.2  -3.06991   GACCACGGCTAAAAC               CCCG GGGAAA CGGG                CTTTGGGGAAAGGAG  47 5
   TTMY_1163  977705 ..  977738 -  -5.9  -2.72344   CGGCAGGGCGAAGCA     GGCCCAAGGGGACTAG GGA CTT-TCCGCCCGGGCC     CGGCCGTAGCCCAAG  47 4
   TTMY_1158  970028 ..  970067 -  -2.1  -3.96148   GTGGCCTACTACAAA CCCCCT-GGGCTGGA-CGC CGCC GTGATCCAGCCCTACAAGG  ACCTCAAGGTCCTGA  57 347
   TTMY_1153  966786 ..  966812 -  -2.9  -2.90615   AGCCGCGGTAAACGA        GGACCTCGGCGC TCAC GCCCCGA-GTCT         ACGCCGGGCCTCCCG  41 11
   TTMY_1152  965708 ..  965732 -  -2.8  -4.18762   AAGCTTCAGGGAAAA         GATC-GCCGAG AACC CCCGGGAGATC          CGGGACGCCCTGCGG  63 114
   TTMY_1148  961752 ..  961765 -  -4.5  -4.32583   CCAAGATTAAAAGAA               GAAGC CCCA GCCTC                CACGTCATGTTTTTA  69 52
   TTMY_1147 NONE
   TTMY_1146  960016 ..  960061 -  -3.8  -3.12351   GGGTGCCAGAGGTAA CCCTGGAAGAGGCGGACGGC CTGCAC GCCCTAAGCCTACTCCAGGT AGCGGCGGGGAAGCC  45 15
   TTMY_1145  959469 ..  959491 -  -5.4  -4.07568   GGCCCCGGGGGAAAA           CCCCATCGCG AAC CGGGAAGGAG           GGCATGACCTCCTTC  64 255
   TTMY_1139 NONE
   TTMY_1138  953912 ..  953928 -  -2.1  -4.74103   GGGCGAACCCAAAAA              GGCGGCA CCG CACCCCC              TTGGGCGTGGAGGTG  74 63
   TTMY_1136  951933 ..  951948 -  -3.2  -4.25104   CCCCCGGGAGGAAAA              CCGG GTCCTGCG CCGG               GTTCTGGAAGAAGCG  66 511
   TTMY_1133  949802 ..  949815 -  -5.2  -3.53444   GGACCCTTTGGGAAA               GGCC GCGCAT GGCC                TAAGTATACGCGGGT  54 251
   TTMY_1132  948599 ..  948632 - -13.1  -2.71422   CACGCTCATAAAGAC     CCCCAG-GGCGCGGGG CCG CCCCGCGCCGCTAGAC     TATACCCCAGGAAAA  67 47
   TTMY_1131  947295 ..  947321 -  -4.4  -4.71222   AGACGAAAAGCAAAA        GGAGG-CTACC GCTCAA GGTTGACCTCC         GGCACCAAGAGGGTG  79 4
   TTMY_1130  946141 ..  946151 -  -8.2  -3.64703   GGCGCTGGATCTAAA                 GGGG ACC CCCC                 AAAGGCCTCAGCGCA  65 33
   TTMY_1128  945291 ..  945310 -   -15  -4.54047   CCATCCTACACAAAA            GCCCCCCA CCCA TGGGGGGC             AGGAAGGCCCAAAGG 100 44
   TTMY_1127  944476 ..  944488 -  -5.5  -4.07568   TGGGCCTCCGCAAAA                GGAAG TTC CTCCC                CAAGGAGCACGGCCC  65 113
  RLTM_03281  935343 ..  935370 -  -3.4   -4.4078   CTTCGCCAAGGAAAA        CGGCCTCCACC CGCCCGT GGTGGAG-CAG        CCCCAGTACTCCATG  69 439
   TTMY_1113 NONE
   TTMY_1112  931393 ..  931413 -    -6  -4.56133   CCTCAACAAGGAAAA            CGGCCACC CCTTT GGAGACCG            GGTTCTAAAGACCTT  76 349
   TTMY_1111  930763 ..  930800 - -13.5  -5.00616   CCTCGTGCGAAAAAA   CCTCCTGCAA-GCCCTGG AGC CCAAGGCCCTGGAGGAGG   TGCTCCTGGAAGAGC 100 118
   TTMY_1108 NONE
   TTMY_1107 NONE
   TTMY_1106  925708 ..  925766 -    -3  -4.42788   GCTAACCCGAGAAAA CCCTTTG-CCGGGGCC-CC-CATGCCGGC GCGA GCCGGCATGGGGTGGCCTCAATCCCCGAG GAAGCGGTACCCCAA  66 14
   TTMY_1105 NONE
   TTMY_1104  923906 ..  923923 -  -2.6  -4.08767   GGGATCCCCGGAAAA             GGCCTC CGCCTC GAGGTC              CTTCACGCCCTCCAT  58 42
   TTMY_1103  922960 ..  922972 -  -9.1  -3.54424   GTCCACCGGCTCAAA                GGGGA CTT TCCCC                AGCTCACCTTCGTCA  61 360
   TTMY_1095  918594 ..  918641 -  -2.5   -3.7941   CACCTCGGACAAGAA GCTCAGGCCCTGCCTCCTCACC GACCT GGAGATG-GACATCGCCTGGGC CTTCGCCGCCCCCGA  55 130
   TTMY_1088  912981 ..  912992 -  -7.2  -2.59431   CTCCTTCACAAGCTA                GCCC TGAC GGGC                 TGACCTTGGGTCTCG  47 4
Ththe16_1984 NONE
Ththe16_1984 NONE
   TTMY_1085  911826 ..  911839 -  -3.8  -3.63515   GCGGAGGGTCAAGAA               GGCT TGATCC AGCC                CCCTAAACTTAGACA  54 44
    TTHA0994  910233 ..  910256 -  -3.6  -3.14132   CTCCGTGGCGAGGAA          GCCCTCCCCC AAAA GGGTCCGGGC           CAGGGTGGTCTTCCC  45 70
  Deipr_2136 NONE
    EBS_1414 NONE
   TTMY_1080  909114 ..  909130 -  -2.2  -3.53012   CCTGGCCCCCCTAAA              GGAGTT CTCTC AGCTCC              TTGGCCGCTTCGCGG  48 4
   TTMY_1079  907988 ..  908006 - -13.8  -2.51223   CTCAACAACATAGAC             CCCGAGCG GGA CGCCCGGG             TGATGCCGGGGGTAG  65 173
   TTMY_1075  903761 ..  903777 -  -3.5  -3.29461   GAACGCCGCCTACAA              CGCCTCC AAG GGGGGCT              TGTGAACCTCACCCG  47 393
   TTMY_1073  901974 ..  902026 - -16.1  -2.73542   GGGAAGGCCCAAGGA GGTGGCCCCCCCGAGGAAGCTCAAG GCC CAGGAGCTCCCGCAGGAAGGCCGCC TCCTCCTGGACCCTC  77 154
   TTMY_1071 NONE
   TTMY_1070 NONE
   TTMY_1069  899126 ..  899143 -  -6.9  -3.00525   TCCGGGGAAAGTATA             CCCTGCC CCCC GTCAGGG              CCCCGTCAAGCTCAC  51 42
   TTMY_1068  897796 ..  897838 - -20.6  -3.70902   TTGGGCATACCTAAA GCTTACCCCCGCCCGGGG GCCTTCG CCTCGGGCGGGGGTAAGG AAGAGGTTCAGCGGG 100 33
   TTMY_1067  895789 ..  895806 -  -8.3  -3.56643   TGGAGACCGGGGAAA             CCCTCCC CGTG GGGCGGG              AGGAGGTGGAGGCCT  61 145
   TTMY_1065 NONE
   TTMY_1064 NONE
   TTMY_1063  893537 ..  893550 -  -2.3  -3.55444   CCTCGAGGGCGTAAA               GGAGC ATGG GCTTC                CCCAAAAGGGGGTGG  48 119
   TTMY_1062  892261 ..  892284 -  -5.3  -2.52464   CCGGGGCTGAAGGGA          GGAGGAAGAG GGCTA CCCTTCC-CC          GAGCTTTCTCAGGGC  44 14
   TTMY_1061 NONE
   TTMY_1060 NONE
   TTMY_1059 NONE
   TTMY_1058  889219 ..  889241 -  -6.2  -2.78384   GTTGGGGGCATTATA           CCCGGTTCAA AGG TCGTACCAGG           GGGGCTTGCCCCGGA  47 9
   TTMY_1057 NONE
   TTMY_1056 NONE
         coA NONE
   TTMY_1054  886528 ..  886538 -  -3.2  -3.37796   CCGCACCACCTACAA                 CCTC CTC AAGG                 CCGTCCTCCCCTACA  47 317
   TTMY_1045  878082 ..  878114 - -11.4   -2.7535   TTCGGGAAGAGACCA     TCCCGG-GGATCG GGTGAGGG CGATCCTCCGGGA      GACCCAAGCGGTGGA  62 54
   TTMY_1043 NONE
   TTMY_1042  874755 ..  874786 -  -4.4  -3.64822   ACTTGGTGAGCGAAA      CCCCACCGGGCCT CCTCCTC AGGCCCT-TGAGG      CTCCTCCACCTGCCC  55 116
   TTMY_1039  872001 ..  872025 -  -2.8  -3.22491   AAAGCGCACCACGAA          GGCCCATT CTAACCCTT AAGGGGCC          GGGTCTTCAGCGGCG  46 45
   TTMY_1038 NONE
   TTMY_1037  869996 ..  870016 -  -5.4  -3.01712   CGCCTTCTCGCAAGA            CGAAAAGC GGAAA GCTTTACG            ACGAAAGTGCATTCA  47 124
   TTMY_1023 NONE
        acoB NONE
   TTMY_1021  855835 ..  855862 -  -5.4   -3.1706   AACTCAGGGCATGAA        CCGGGCCCGG GACTGGCT CCTCGCCCGG         GTCCTCTGGGAGGAA  49 64
   TTMY_1020 NONE
   TTMY_1019 NONE
   TTMY_1018  853220 ..  853236 -  -4.3  -3.53012   GCGGGCCGCGGGAAA              GGAGCTC CTG AAGCACC              TCCGGGGGGTGAGCT  51 373
   TTMY_1016  850990 ..  851014 - -14.2  -3.72576   GGCTTTTGGAGGAAA          CGGGCGGCGC TTACC GCCCCGCCCG          GAAGAAGGGGAGCGC  79 77
   TTMY_1014  850231 ..  850254 -  -5.2  -3.53012   CCCCTGGCCTGCAAA          CCCCCCG-TGC CCT GCAGCGCGGAG          TACATACCCGAGTTC  54 75
   TTMY_1009 NONE
   TTMY_1008  844672 ..  844703 - -12.2  -3.72695   AGCTCGGCTACGAAA      GCCCCCTGGCCC TCTACGCC GGGCCGGAGGGC       CTCTCGGTGGCCCGC  76 167
   TTMY_1002  840051 ..  840085 -  -3.5  -3.58533   TGATAACTTGGGAAA    GGGGGGT-GGT-GGGCG GCA CACCTTACTTACCCCCC    TCTTCTCTTCCCTTG  51 105
   TTMY_1001 NONE
   TTMY_1000 NONE
   TTMY_0999 NONE
   TTMY_0998 NONE
   TTMY_0997 NONE
   TTMY_0996  832974 ..  832997 -   -21  -3.53012   TGGCCTTGTGGGAAA          GGGGCCCGGG GCGC CCCGGGCCCC           CGGGGTCTACTTGCC 100 32
   TTMY_0995 NONE
        livF NONE
   TTMY_0993 NONE
   TTMY_0992 NONE
        mntB NONE
   TTMY_0990 NONE
   TTMY_0989 NONE
   TTMY_0988 NONE
   TTMY_0987 NONE
   TTMY_0986 NONE
   TTMY_0985 NONE
   TTMY_0984  823891 ..  823913 - -12.6  -2.78816   GCACGGCCCACCACA           CGCCCCGGCC TCG AGCCGGGGCC           TTTTGCGCCCAAGCC  65 59
   TTMY_0982 NONE
   TTMY_0981  822968 ..  822999 -  -8.6  -4.36914   CTCCTGCCCATAAAA      GCCTGGGGC-CCGGG AGC CCCGGAACCCCATCC      CTCTCCCCTTCCCCA  79 50
   TTMY_0975  817808 ..  817837 - -20.8  -3.01924   CATGGCTTTCCAAGA       CATCCCCGGGGC GACCCG GCCCCGGGGATG        AGCGTCGGGCTAGCT 100 40
        appB NONE
        appC NONE
   TTMY_0972 NONE
   TTMY_0971  813330 ..  813351 -  -9.3  -3.59738   CAGTATACGGCGAAA           GGACCCAGG CCTA CCGGGGCCC            CCATCCCGGCTACGC  64 56
        acuB NONE
   TTMY_0969 NONE
   TTMY_0968  811552 ..  811581 -  -9.3  -2.83271   GCAGGCGCAGAACGA       CCCTCACCCCGCTA GTG TAGC-AGGTGGGGG       GCCACGAGCTCCGTG  56 7
   TTMY_0967 NONE
   TTMY_0966  810352 ..  810392 -   -11  -2.78495   GGACCAGGAAGAGGA CCCGGTAAG-GCCCCCCCT TTGT AGGGGCGGCACACCCCGGG  CTTAACCGACACGGA  60 27
   TTMY_0964  808578 ..  808591 -  -5.2  -3.71527   GGCCAAGGAGGCAAA               GGGG TCCACG CCCC                TAGTCTAGCCGCACC  57 25
   TTMY_0963 NONE
   TTMY_0962  807191 ..  807206 - -11.8  -4.25104   CCCCCGGCACCAAAA              GGCCCC TCCG GGGGCC               TTTACCTTTTGTCCC  91 27
   TTMY_0959  804548 ..  804565 -  -6.9  -3.05384   GCCTGCCCCACGGAA             GCCCTCC TCGG GGACGGC              ACCCTGGACGCCAGG  51 479
   TTMY_0955 NONE
   TTMY_0954 NONE
        thrC NONE
   TTMY_0952 NONE
   TTMY_0951  799605 ..  799633 -  -5.8  -4.18018   CCGCCTCATCCAAAA        CCACCTCCTGCG TTGGG CCCGGGAGGAGG        GGATCCCCGTGATCC  69 442
   TTMY_0948 NONE
   TTMY_0947  798032 ..  798055 -   -21  -3.51032   ATGGCTCAAGTATAA          GGCCCCGGGG CGGT CCCCGGGGCC           CCTTGGTGGGCGCGA 100 31
   TTMY_0946  797288 ..  797322 - -15.7  -4.10161   CAGTACCCGGGAAAA    GGGGGGGCC-TACGCC CTAA GGCGCACGGCCCCGCC     CCTTCCCCGCTGGCT  90 332
   TTMY_0933  787668 ..  787709 -  -2.9  -3.64703   CCGCCGCCACTGAAA TCACGTACACGG-GGCGGTC CTT GTCCACCACCTTGTCCATAA GCCCTTAGCTCCTCC  53 66
   TTMY_0932  786948 ..  786965 -  -2.7  -3.49633   GAGAAAGGCAAAAAG             CTCGGTGA GGT CCAC-GAG             GATACCCTAAACGCC  49 66
   TTMY_0931  785241 ..  785251 -  -6.8  -3.53811   CGGAGCTGGTGGAAA                 CCCT GGA AGGG                 GGCCTCCTGGTGGAC  56 438
   TTMY_0924  778483 ..  778494 -  -2.2  -2.91144   GTAGTGGGGAAAGTA                CTCC TCCT GAAG                 CCTTTGCAAAATCTT  40 248
   TTMY_0921 NONE
   TTMY_0920 NONE
   TTMY_0919 NONE
   TTMY_0918 NONE
   TTMY_0917  773679 ..  773690 -  -5.8  -3.61398   GGTCCGGGGGAAGAA                CTCC TCGG GGAG                 GATGCGGGTCACGCT  54 64
   TTMY_0916  772207 ..  772254 -  -2.7  -3.53012   GGTGGGCCTCGTAAA GCGGGGTCTTCTTCATGGCCAGG CCAT CCTA-CC-CGAAGAACTCCCGGC GCAGGGCCTCGGCGG  49 6
   TTMY_0915 NONE
   TTMY_0914  770679 ..  770701 - -14.1  -4.41494   CATCCTCAAGCAAAA           CCCCAGGGC CATTT GCCCCGGGG           CCACAAAACGCCCTT 100 92
   TTMY_0913  769353 ..  769363 -  -3.2  -4.14511   AAGCTCATGCCAAAA                 CCTC CCT AAGG                 GCCTCCCGGAAGGCC  59 4
   TTMY_0912 NONE
   TTMY_0911  767671 ..  767702 -  -5.1  -3.28712   CTTTGGCCGCTACAA     GGGGGTGGCCAACGT GGGG ACGC-GGCC-CACCC      TGGGGGGGGAGGAAA  51 245
   TTMY_0907  765766 ..  765795 -  -8.6  -3.14132   TTCGTCCCGCACCAA       GGCCGCCTCCTTC ACCAG GAAGGAG-CGGCG       GGGCGGGGGCGGGAG  56 117
   TTMY_0902  761476 ..  761491 -  -6.2  -3.34715   GAGCGGTTTGAAAGA              GAATGT TAGC ACATTC               CTTCGTGTGCTACCT  53 40
   TTMY_0901 NONE
   TTMY_0900  760033 ..  760060 - -19.2  -2.62184   GGGGGCTTTATACCA        CCCCATGCTGGC TTGC GCCAGCACGGGG         GCCCCGGCAAAAGCT  93 186
   TTMY_0896  755457 ..  755474 -  -6.3  -3.53012   GGCGGGGGCTGGAAA             CCCTGGAG CGC CTC-AGGG             AGGCCGCCCCCCTCG  56 417
Solyc06g005200.2  754491 ..  754537 -  -2.7  -4.07568   CCCTGGCGGCCAAAA CCCCCTTCCCCGCCCCCCG CAGGGTGGT CCAGGGGCTGGACGGGAGG CGCGTGGACGTGGTC  60 471
   TTMY_0890 NONE
   TTMY_0889 NONE
   TTMY_0888 NONE
   TTMY_0887  748231 ..  748255 -  -2.8  -4.07568   GCGGGTGCGGGAAAA         GGCCTTG--GCC CTG GGCTTCCAGGCC         CTGGGGGAAGGGGAA  60 87
   TTMY_0885 NONE
   TTMY_0884  746623 ..  746636 -  -4.5  -4.08394   AGACTTCCTGCAAAA               CCTCA ACCC CGAGG                CCCTTGTGGTGAAGC  63 262
   TTMY_0879 NONE
   TTMY_0878 NONE
   TTMY_0877  743086 ..  743113 - -18.4  -2.53271   GGACGGGCATAAGAG        GGAGGCGCCGGG GCTC CCCGGCGCCTCT         AAGGGCCTTTTAGCC  87 35
   TTMY_0876  742605 ..  742617 -  -2.6  -2.70774   GAGGGGAAGGAGAAG                CGCG GTCAT CGCA                GGTAGTTTAGCCCGT  38 18
   TTMY_0875 NONE
   TTMY_0874  740941 ..  740959 -  -5.2  -3.53012   GGCGGGTGGGGGAAA             GGAGGAGC CAC ACTACTCC             ACCACCTTAAACCCC  54 19
   TTMY_0873  739788 ..  739822 -   -15  -3.28712   CGCCGCCCTGGAGAA     GTACCCCTACCTCCAC GGG GTGGAGGTGGAGGTCC     TCCTGAGGCACCTCG  75 425
   TTMY_0870  736676 ..  736696 -  -2.4  -4.41494   GAGCCTCAAGGAAAA            GCGGGCCC TCATC AAGCCGGC            CCTGGAAAGGCTCAA  67 259
   TTMY_0866 NONE
   TTMY_0865  733176 ..  733192 -  -7.9  -3.29144   CGATGCGCTCCAGAA              CCTGGGG AAG CCCCATG              CGCCCCTCACCTCCC  56 74
   TTMY_0864  732570 ..  732580 -  -8.2  -4.85599   CCTAGTCTACAAAAA                 GGGC CCG GCCC                 ACGCGCACCAAGGTG  88 1
   TTMY_0863  731916 ..  731930 -    -7  -3.53012   CTCCTCTTCCTCAAA               CCCCAC CTG GAGGGG               CGCCTCCTCCTCGTC  56 190
   TTMY_0861  729621 ..  729637 -  -6.5  -4.25283   AGGCGGGGATGAAAA              CCGGG TGGCAAC CCCGG              TAGAATGCCCCCATG  70 292
   TTMY_0859 NONE
   TTMY_0858 NONE
         tdh  720478 ..  720521 - -11.6  -4.82901   GGGGGCTTACAAAAA CCTTAACGGGGGAG-GGGGGC CAC GCCCCCTCTCCCCTGACCAGA AAAAGGCGGCCTCAG 100 37
TaqDRAFT_3629  719649 ..  719675 -  -2.9  -3.85698   CCCGCCGGGCAGAAA        GGCC-AG-GGCCC AGG GGACCTCGAGGCC        CCCCACCACCTCCTC  56 191
   TTMY_0855 NONE
   TTMY_0854 NONE
   TTMY_0853  718441 ..  718465 -  -8.5  -3.53811   TGGACCTTCTGGAAA          CCGAGGAGCAC TAC GTCCTCCTCGT          GGACCTCCCCGGGGT  61 264
   TTMY_0851  717767 ..  717811 - -10.6  -3.53012   GGGCCTCTTGGGAAA CCGGGCC-GGGGGGTGCCCGTG CGC CTCAGG-ACCTCCAGGGCCCGG ACGAGCCTCCTGGGG  70 6
   TTMY_0850  717334 ..  717359 -  -2.4  -3.57263   ACCTCCAGGGGGAAA         CCTC-CCCCCG GGCCA CGCGGGCGCGG         ATCTCGTGGGCCAAC  48 50
   TTMY_0849 NONE
        gatA NONE
   TTMY_0847  715116 ..  715131 -  -3.9  -3.14132   GTCCTCGTCCACGAA              GCGGA CCTGCT CCCGC               CCGAGGAGGCGCTGG  45 113
   TTMY_0846  714065 ..  714081 -  -7.2  -3.33737   CATCAAGCTCTACAA              GGCCGC CCTTT ACGGCC              GCTTCCCCGACTGGG  55 110
   TTMY_0839  707513 ..  707523 -  -2.4  -3.55444   GGTGGAGTCCCTAAA                 GGCC CAA GCCC                 ACGGGGGGATGGACA  48 194
 TtJL18_1492 NONE
   TTMY_0836  706109 ..  706123 - -11.4  -2.78384   CCCCTCGGGAGTAGA               GGAGGC CTT GCCTCC               TTTCCCTCCAGTCCC  62 53
   TTMY_0835  704434 ..  704456 -  -3.3  -3.28712   GGCGGTGCGGGACAA          CGACCTCTCC GCCC GG-GTGGCCG           GGGTGGACCTCACCC  47 518
   TTMY_0825  695012 ..  695045 -  -7.5  -3.35679   CGTGGTGAGCGAGAA     CCTTAGGGTCCTTC GGGGGGT GGAGG-CCCTAAGG     CGGGGGGACGCCCGG  55 268
   TTMY_0820  691378 ..  691405 - -21.4  -2.62184   GGGCTTTTCATACCA        CCCCATGCTGGC TCGC GCCAGCATGGGG         GCCCCGGCAAAAGGT  88 270
   TTMY_0815  686758 ..  686813 -   -13  -3.53012   CCGCCCCCTGGGAAA GGCCCTGGCC-CCCCGACCCCGCCCGC AAG GAGGGGGAGGTGTGGGTGGCCTCGGCC CAAGAGCGCCTCCTC  72 179
   TTMY_0808  681662 ..  681673 -    -3  -4.38712   CGTAGGCCTAGAAAA                CTTT GCCG AAAG                 GCCAGTAGAAGCCCT  69 329
   TTMY_0799  673892 ..  673925 -  -7.4  -4.61231   CTACACCCGCAAAAA    GCACGTGTGGCGGCCC AGGA AGGCCGCCCCA-G-GC     CAGGTGCTCTACACC  83 228
   TTMY_0792  666895 ..  666920 -  -7.6  -2.70932   CCGGTGCTCTAACCA         GCTGAGCTACG CTCAC CGC-GCTCAGC         ATCCGCCATTCTACG  51 44
   TTMY_0791  666811 ..  666828 - -12.7  -3.63744   CCCCCCTTTAAAATA             CCACCCC TTTC GGGGTGG              CGGCTTGGGGTGAGC  77 33
   TTMY_0790  666684 ..  666696 -  -4.7  -3.14132   CCTCGTCCCGATGAA                GGGGG GGC CGCCC                GGATGGTGCGAGGAG  47 32
   TTMY_0789 NONE
   TTMY_0788 NONE
   TTMY_0787  665409 ..  665431 - -20.6  -3.57462   TAGTTTAGCGGCAAA           CCCAGGGGGG AAA CCCCCCTGGG           CCACCATGCGCCAGG 100 44
   TTMY_0786 NONE
        clpX NONE
   TTMY_0784  663520 ..  663547 - -22.8  -2.70932   CTTGGGGGCTAAGTA        CCCCGCTCTGGC TTGC GCCAGAGCGGGG         GCCCCAAAAGAGCCT 100 93
   TTMY_0782 NONE
   TTMY_0781  658250 ..  658281 -  -4.2  -4.07568   GCCTCCCCTCTAAAA      GGCGGGCATCCCCG AGGC CTGGATTGTCCACC       TGCTGGAGGAAGCGC  61 141
   TTMY_0779 NONE
   TTMY_0778 NONE
   TTMY_0777  655222 ..  655256 -  -6.3  -4.56597   CCTCCCGTGCAAAAA     GGGGCACCAGCCCAA GGCCT TTGGGCTGGCGGTAC     CGTTACTCAGTATAG  76 28
   TTMY_0776  654203 ..  654250 -  -6.8  -3.60792   TCCGGAAGGGGCAAA GGCCCACGGGGCGTACG-GGGAG GCT CTCCCTCTTCCACCACGTGCGCT TCCAGCTCTACGACA  59 506
   TTMY_0774  653612 ..  653644 - -27.9  -3.71284   CCCCGATGAAGAGAA      CCCGCATGGGGGCAT TAT ATGCCCCCATGCGGG      AGGCCCCCGGTCAAC 100 207
   TTMY_0773 NONE
   TTMY_0772  650248 ..  650261 -  -2.3  -4.26076   TGAGCCCCAGCAAAA               GGTCC CCGA GGAGC                TTCTCTTGGGCCAGC  62 52
     TTHV062 NONE
   TTMY_0763 NONE
   TTMY_0762 NONE
TaqDRAFT_3499 NONE
  TNMX_03575 NONE
  Theos_1318 NONE
  TNMX_03590 NONE
  PVLB_05960 NONE
  TNMX_03595 NONE
   TTMY_0755 NONE
TaqDRAFT_3489 NONE
   TTMY_0752  637971 ..  637984 -  -8.1  -3.53012   GGTCGCCCGTTCAAA               TCGGG CCGC CCCGA                CCACGCGGGAGTAGC  60 294
   TTMY_0748  637510 ..  637525 -    -6  -4.19506   ACCCGAAGGCGAAAA              GCCGCC TCAC GGTGGC               GGTGCGCCTCGAGCC  69 179
   TTMY_0743  632835 ..  632848 -  -5.2  -2.90194   ACCTGGTCAAGTAGA               GCGC ACATTA GCGC                ACTCCGGCCCCCCAC  46 3
   TTMY_0740 NONE
   TTMY_0739 NONE
   TTMY_0738 NONE
   TTMY_0737  629128 ..  629149 -  -8.7  -4.63218   GGCTCTTGAAGAAAA           GGCGGCCGAG CTC CTCG-CCACC           TTCCCCGAGGTCCTC  85 280
   TTMY_0719 NONE
   TTMY_0718  608527 ..  608561 - -20.8  -3.61398   GGTGGGCCGGAACAA     GGCCCCCGTCCTCCTC TCC GAGGAGGACAAGGACC     GCTTCCTCCTCCTCT 100 387
   TTMY_0716 NONE
   TTMY_0715 NONE
   TTMY_0714  606609 ..  606622 -  -5.2  -2.78935   ACACGCCTCAGGATA               CCGG CTTCAC CCGG                TAGCGGCAGCACCTC  45 4
   TTMY_0713 NONE
   TTMY_0712  605127 ..  605157 -  -6.1  -3.31792   CGAGGAGGGGGAGAA      GGAGGAGGAGGAGA AGCC TCACCTTC-CCTCC       CCGGCGGTGCAGAGG  53 13
   TTMY_0711 NONE
   TTMY_0708  603046 ..  603064 -  -2.2  -2.78384   CCGTCCTCTAGCACA             GCGGAGGC GTG GCCCCAGG             GCCCTATAGCCCCAG  38 29
   TTMY_0707  602877 ..  602904 -  -3.4  -4.07885   GAGGGTGTCGTAAAA        CCCCTGGAC-GAG CTC CTCCGTTCAGAAG        GCCATAAGGTCCGCG  59 19
   TTMY_0706  602278 ..  602302 -  -9.4  -3.57561   GTGGAAGCGTGGAAA         GGTGTAGC-CT GAGG AGAGCTACACC          GTTCGCCTAAGGGGA  64 32
   TTMY_0705 NONE
   TTMY_0704  599225 ..  599267 -  -6.9  -3.30124   CTCGAGGCCCGAGAA GCTCGCCCTCCCCCTCG-CCC TGG GGGCCGAGGAGGCCG-CGACC TACCCCGAGGTGCCG  53 403
   TTMY_0702  597548 ..  597584 -  -8.6  -3.23692   CATCAGCATGACCAA   GGTCCGGGCCCTCCTCC GGGA GG-GAAAGGCCCCGCCC    CCGGAGCTCGTCCGC  56 54
   TTMY_0698  594719 ..  594734 -  -8.2  -3.23216   CGGGAGGAGCAGGAA              GCCCGC TACG GCAGGC               TCTACGAGACCGACC  58 331
   TTMY_0693  589716 ..  589729 -  -9.5  -3.57462   TAGGCCAGCGGGAAA               GGGCC ACGC GGCCC                GAAGGGGGCTAGGTT  64 220
   TTMY_0692 NONE
   TTMY_0691 NONE
        thiG NONE
   TTMY_0689 NONE
   TTMY_0688 NONE
   TTMY_0687 NONE
   TTMY_0686  583734 ..  583767 -  -3.6  -4.59773   GCGGAGCCCCAAAAA     GCCCCCCACCGCCC CGGTTT GGGCACCGTGGCGC      ACTCCGCCTAGGCCC  73 33
   TTMY_0680  578019 ..  578049 - -18.2  -3.14344   CACCCGGGCGAGGAA       GCGGGCCCTGGGCC TAA GGCCCAGGGCCAGG       GCCTTTTCCCTGTCC  86 8
   TTMY_0679 NONE
   TTMY_0678 NONE
   TTMY_0677  575714 ..  575728 -  -5.6  -4.57073   GAGGTGGCGGAAAAA               CGCCGG CTT CCAGCA               CCTCGCCCCGTGGAG  75 520
   TTMY_0670  568900 ..  568919 - -16.4  -3.36823   CGCCCCAAAAGGCAA            GGGGCGCC CGAA GGCGCCCC             TTTGTGGTGGAGGTG  85 259
   TTMY_0669  567548 ..  567558 -  -2.4  -4.11484   GTCAAGGGCCCAAAA                 CCCC AGG GGGC                 CTTGCACGTGGGCGC  58 138
   TTMY_0668 NONE
   TTMY_0667 NONE
        smtB  566213 ..  566249 -  -3.7  -4.11216   CCTCCACCCGGAAAA   CGCGCACCTTAGGAGC CTCCAT GCCCCTAGGGTA-GCA    TCATTTGAGCTAATG  61 42
   TTMY_0665 NONE
Ththe16_0715 NONE
   TTMY_0663  564160 ..  564173 -  -5.2  -3.75629   CATGGTGAAGCCAAA               GGCC AGATCG GGCC                ACCCCCTACACCCGT  57 31
   TTMY_0662 NONE
   TTMY_0661  563070 ..  563091 - -11.6  -4.14392   TCCTAAGGCGCAAAA           TCCGGGAG TTCGGC CTCCCGGA            GGAGGTCTACGAGTG  80 358
   TTMY_0654  556683 ..  556714 -  -4.5  -4.19238   CGTCCAAGGCCAAAA     GCCCTTCGT--CCTG GCCT CAGGCGAGGAAGGGC      GGGGCGCGTGGGGGG  66 10
   TTMY_0648 NONE
   TTMY_0647  550717 ..  550744 -  -2.5   -3.5882   TATACCAGCGCGAAA        GGCGGCCTCGT GCCCGT ACGGGGCGGCA         TCAGGGGCCTTCCGC  48 26
   TTMY_0646 NONE
   TTMY_0645  549453 ..  549469 -  -2.2  -3.02263   AGAGCTCGTGGAAGA              GCCTCA TCGCC TGAGGT              CCAGGGAGCGGGCGT  41 12
   TTMY_0644  548602 ..  548658 -  -9.9  -3.46602   CCGTGGAGAGGAGAA GGGGCCCAAAGAGCAGGCGCTTCATGG CCT CCAATATACGCCGCCCCTCCAGGCCCC GCCTTAAGCCTGGGC  65 29
   TTMY_0643 NONE
   TTMY_0642 NONE
   TTMY_0641 NONE
   TTMY_0640 NONE
   TTMY_0639  545849 ..  545873 -   -20   -4.1899   CCACGCGAGGGAAAA          CGCCCCGGGC TTTAG GCCCGGGGCG          TTTTGGTGCCGGGGA 100 32
   TTMY_0629 NONE
   TTMY_0628  532834 ..  532870 -  -6.4  -2.82623   CCCCGGGGAGAAGGA    GGCCTCCCTTCCCGTG CGCCT CACCCCCAGGGAGGCC    CTGGCCACCGCCCGG  48 385
   TTMY_0624  528810 ..  528859 - -15.8  -4.08692   CAACCTTCTGGAAAA CGCCCTCCGCCACGCCAAAAGCCG CGTC CGGCT-CCGG-GTGGGGGAAGGCG TGTTCCTCGTGGAGG  90 285
   TTMY_0619  524549 ..  524561 -  -4.7  -3.21099   CCGGCCTACGACGAA                GGGCG TGA CGCGC                GACCGGTTACCGTTG  47 445
   TTMY_0617 NONE
   TTMY_0616 NONE
   TTMY_0615 NONE
   TTMY_0614  521410 ..  521421 -  -2.2  -2.62616   GCACCTCCTAGACGA                CCAA CCGG TCGG                 TAAGCCCACCCTACT  38 36
   TTMY_0613 NONE
   TTMY_0612  518597 ..  518621 -  -6.3  -3.73953   AGGATCTGGAGGAAA          GGATCGCCGAG TAC CTGGGCCACCC          CCCCTTTGACCCCCA  62 519
   TTMY_0609 NONE
   TTMY_0608 NONE
   TTMY_0607  514993 ..  515016 -    -8  -3.14344   CAGGCCCTGCACGAA          CGGGCCGAGG AACT CCTCGGCAAG           GCGGAGCCGGAAGAC  54 454
   TTMY_0602 NONE
   TTMY_0601  510080 ..  510110 -  -9.6  -3.27475   CCGGGGACGATAAGA       GAGGGGGGTAAGCG CCA CGCCCAACCCCTTC       TTGGCGAGAGAACGG  61 169
   TTMY_0595 NONE
   TTMY_0594 NONE
   TTMY_0593 NONE
   TTMY_0592  504257 ..  504269 -  -2.6  -2.80252   ACTCGTAGAAGAGGA                CACG GCCAG CGCG                ACGTTCTCGTGATAA  38 63
   TTMY_0590 NONE
   TTMY_0589  500916 ..  500926 -  -2.4  -3.67175   ACCGCCCAAAAGGAA                 GGCC GCG GGTC                 GTGTCAAGAGTTATG  51 29
   TTMY_0587  498176 ..  498202 - -13.7  -4.99134   ACGCTAAAGGAAAAA         CCTCCCCCAGG CGCTT CCCAGGGGAGG         CAGAAACCCCTGACC 100 40
   TTMY_0581  492538 ..  492575 -  -7.5  -3.55563   ACCGGATCCGGCAAA   GCCTCCGGCCCAAGGAG GGCG CCCCTTGCGCCTGCGTC    CACGTGGCCACCGTC  58 387
   TTMY_0568  481892 ..  481908 -  -5.7  -3.28712   GGTGGTGGGGGAGAA              GGAAGCC CCC GGCCGCC              CCAAGCTCTACGGCA  51 79
   TTMY_0565  479377 ..  479388 -  -5.8  -3.73775   CTGATGCGGATGAAA                GAGG GCGA CCTC                 TGCTTCTTCTACCAC  60 315
  TSC_c07170  478666 ..  478691 -  -3.1  -3.04715   GAGCTCGTCCAAAAC         CCCTTGCGCCC GGGA AAGCGCCATGG          ACCCAGCCTACCAGG  42 33
   TTMY_0562  477328 ..  477345 -  -3.3  -3.08977   CGTGAAAAAAGACCA             GCGCCCC TAGG GAAGCAC              CTTGCCGGGGTTGAA  44 14
   TTMY_0561  476008 ..  476030 - -13.4  -2.69799   GGAGGCCATAGAGGA           GCTCCGGGAG GTC CTCCTGGAGC           TGGAAGGCCTCCTGG  63 324
   TTMY_0554  471421 ..  471436 -  -7.5  -3.14564   CCAGGGCCTCACCAA              GCGGG AGCTCG CCCGC               ATCATCCTCATGGCG  54 70
   TTMY_0548 NONE
   TTMY_0547 NONE
   TTMY_0546 NONE
   TTMY_0545  466652 ..  466668 -  -3.5  -3.13403   TGTGGGTCACGAAGA              CGTGGCG CAC CTCCTCG              GGGGCCACCCCCTCC  45 174
   TTMY_0544  465939 ..  465949 -  -2.4  -2.74322   CCTAACCCTCCAAAG                 CCTC CGG GTGG                 TGCTTCCGCCAGTAG  38 1
   TTMY_0543 NONE
   TTMY_0542  463287 ..  463306 - -10.6  -3.14051   GGACCCCGAGCAAGA            CGCCGTGG TGGC CCTCGGCG             GGGTCCATGTCCTGG  62 506
   TTMY_0538  458824 ..  458849 - -11.2  -3.28712   CCGTGTGGTCTACAA         GGC-CCTCTCC CCCCT GGAGAGGCGCC         GGGCCCTCGAGGGGT  64 208
  TSC_c07400  456803 ..  456832 - -13.5  -3.06831   CTAAGCCTGAGGGAA       GGCCCCATCCCGG GAAG CCGGGATGGGGTT        CTAAACTGAGGCCAT  70 54
   TTMY_0524  446524 ..  446548 - -12.2   -4.3586   CCATCCAGAGCAAAA         TGTCCCGCCCC CGTG GGGGCGGGA-A          GGCGCGCCCTCTTCC 100 53
   TTMY_0523  445516 ..  445526 -  -8.2  -4.08216   CTACCGGCTGGAAAA                 CCCC TTG GGGG                 ACCGGGTGGACCGGG  71 343
   TTMY_0520 NONE
   TTMY_0519  440943 ..  440953 -  -2.4  -2.79302   AGGAGGGCGATCATA                 GCCC GAG GGCC                 CGGTAGAGGGTGGCG  38 10
   TTMY_0518  440197 ..  440223 - -20.9  -2.71364   GGAGGCCCCTAAGTA         CCCCACCGCGG TTTCG CCGCGGTGGGG         GTCCCAAATTGGCCT 100 81
   TTMY_0513  435536 ..  435574 -    -3  -3.01712   CCCTGGGGCCGAAGA  GGGCGCGGCGGGTCATG CTAGGC CTTCACCC-CCACGGCC   TTCCGGATGGCCTGG  42 4
   TTMY_0512 NONE
   TTMY_0511  434257 ..  434282 - -10.3  -3.39449   CCTGAGGAAGACCAA         GGCGGTGCTGG AAAA CCTCCACCGCC          TCTGGGGCAGGCCCG  64 90
   TTMY_0506  430375 ..  430398 -  -2.4  -4.72986   GAGCTCTAGCAAAAA          CCTTCCCC AAAGTCAA GAGGAAAG           GCCCCTGAGCTCTCA  74 68
   TTMY_0500 NONE
   TTMY_0499  427213 ..  427227 -  -4.2  -3.36273   CCGGTTCAAGAGGAA               GCGG CCAGGAC CCGC               TCCTCCAGCCCCTTG  49 1
   TTMY_0498 NONE
   TTMY_0497 NONE
   TTMY_0496 NONE
   TTMY_0495  424034 ..  424053 - -11.4  -2.71712   TCTCTCGGGCCAAAG            GGCCCTCC GCCT GGAGGACC             TGAGGAACGTGCCCG  60 224
   TTMY_0486  417539 ..  417549 -  -8.2  -3.36327   CGACCTGAGGGACAA                 GGCG GTG CGCC                 TCGCCTTTGAGAAAG  58 196
   TTMY_0482 NONE
   TTMY_0481  413504 ..  413526 -  -6.9  -3.57144   GGCCCGACCTGGAAA           GCGCCCAGT AGCCG AGCGGGCGC           ACGTCACGCCCTACC  58 81
   TTMY_0479 NONE
   TTMY_0478 NONE
   TTMY_0469  405313 ..  405323 -  -8.2  -4.19238   TCCCCAAGCGGAAAA                 GGCC CCC GGCC                 CGGATGGCCTACCTC  76 39
   TTMY_0466  402294 ..  402309 - -10.4  -3.53012   GGCCTTCGCCCTAAA              GCGCTC GGCG GAGCGC               ATCGCCGAAGAGATC  67 93
   TTMY_0460 NONE
   TTMY_0459 NONE
   TTMY_0458  393711 ..  393735 -  -7.8  -3.63073   TACACCCTGGAACAA         GCC-GAGGTGG TCCT CCGCCTCCGGC          TTTTTAAGCTCATCC  63 42
   TTMY_0455 NONE
   TTMY_0454 NONE
   TTMY_0453  386432 ..  386464 -   -22  -3.97689   TAGAACGCTAAAGAA      CCCCCCCGTGCGGG GCAGG CCCGCACGGGGGGT      AAGGCTACCTCACGC 100 46
   TTMY_0451 NONE
   TTMY_0450  383285 ..  383308 - -12.4   -4.4891   GGGAGTAGCAGAAAA          CGAGGCCACC CAAA GGTGGTCTCG           CCATGCGCCTCAAGG 100 150
   TTMY_0449  382555 ..  382574 -   -10  -3.53811   CGCAGTGGGGGCAAA            GGAGCAGG GGCA CCTACTCC             TCCCTCCGGCCGAAG  67 19
   TTMY_0448  382266 ..  382316 - -15.5  -3.83026   GCTTCGCAGAGCAAA CCTCAAAGCCGCCAACCCCCCGGG AGGC CCCGGGGGGTTAGCC-CTTCAAGC CCTCAGTCAAACAGG  90 28
   TTMY_0447  381888 ..  381903 -    -6  -3.53811   CGGACCTGGGGGAAA              GCCTCG AGGC CGTGGC               CCAGGCCAACCTGGC  53 117
   TTMY_0441  376850 ..  376869 -  -4.2  -3.74747   GCAAGGTGGAGCAAA            GGGGCCTCA CCC TG-GTCCCC            CTCAAGATCTACTTC  58 94
   TTMY_0437  373987 ..  374006 -  -9.2  -2.62616   CCAGGTGGGAGAGGA            GGACGAGG GAAG CCCCGCCC             TCCAGGAGGTGGCGG  54 165
   TTMY_0436  372888 ..  372915 - -14.1  -2.52464   CCTTGCCGTAAGCCA        TGGCCTGGGGC CTCCAC GCCCCAGGCCT         ATTCTAAGGCTCCCC  68 84
   TTMY_0435 NONE
   TTMY_0434 NONE
   TTMY_0433  370733 ..  370743 -  -6.8  -3.14132   CCCCGGGGGGATGAA                 GAGG TCC CCTC                 GGGGAGGCGGACGAA  52 252
   TTMY_0432 NONE
   TTMY_0431  368640 ..  368682 -  -4.7   -4.2349   TCGCCAGAGGCAAAA GGGGGTGTAG-CGGCCCCGT CCCA AAAGGGCCGCCTTCAGCCGC TGGGCCTGCACTCCC  66 74
        coaE  364160 ..  364206 -  -4.1  -3.59979   GCCCTCCAGGGCAAA GGGTGGTCGGGGAGGGAGCCGC TTTG GCGCCTCGG-CCCCGTCCCCGC GGGCCTCGTCCTCCT  55 373
   TTMY_0425  363934 ..  363951 - -14.1  -4.14056   ACCCGAAAGCAGAAA             GCCGGCC TTTA GGCCGGC              CCTTGGTCGGGGAGA  85 31
   TTMY_0424 NONE
   TTMY_0423  362545 ..  362560 -    -6  -3.53091   AGGGCCTCCTCCAAA              GAGGCC CCCG GGCCAC               CGTCTCCCGGAAGGG  56 345
        purH  361365 ..  361387 -  -4.1  -4.07568   GCCCCTTTGGCAAAA          GCCA-AAGGG GCGT CCCTAGTGGC           GGAAGTGGCGCACGC  61 18
   TTMY_0416 NONE
   TTMY_0406  350146 ..  350178 - -22.8  -3.05463   AGCGCCCTGACCTAA     GCACCCCACCGCGGC GAAA GCCGCGGTGGGG-GC      CCCAAAAGAACCCTC 100 91
   TTMY_0405  349764 ..  349783 -  -3.4  -3.63515   CGGCACCGGGAAGAA            CGCCACCC CCGA GGACGCCG             AGGCCATGCACCAGG  53 228
   TTMY_0399  344154 ..  344168 - -11.4  -3.53012   GCCCCCGGCCTCAAA               GAGGCG GGC CGCCTC               TTCCGCCCAGTGGGC  72 179
   TTMY_0398 NONE
   TTMY_0397  341749 ..  341772 -   -11   -3.7108   AGGTCTACATGGAAA          GCGCCACC-CT AGA AGAGGCGGCGC          AGGCCCTCCACATTC  69 134
   TTMY_0395 NONE
   TTMY_0394 NONE
   TTMY_0393 NONE
   TTMY_0392 NONE
   TTMY_0391 NONE
   TTMY_0390 NONE
   TTMY_0389 NONE
   TTMY_0388  334331 ..  334344 -  -8.1  -3.16564   CTCCCAGTCTAGGAA               GGGAC CTTT GTCCC                GTCAAGTGACGTGCT  54 27
   TTMY_0387 NONE
   TTMY_0386  332033 ..  332082 -  -8.5  -3.21099   GGGCGCGAGGAGGAA GGGAAGGAGGAGCAGGACAA-ACC AGA GGTACCGCCTCACTCCTCCACCCC CTTCGCCCGGAGGCT  56 11
        livM NONE
   TTMY_0384  329578 ..  329593 -  -3.2  -3.14881   CAAGGCCTCCATGAA              GGGG TCCCTCAT CCCC               CTTCCACCTCCCGCG  44 18
   TTMY_0383 NONE
   TTMY_0382 NONE
   TTMY_0381  327154 ..  327166 -  -6.9  -3.53012   GGGCCTCTTCGGAAA                GCGGG TGG CCCAC                GGCTACTTCGTCCTC  58 323
  PVX_081710  320399 ..  320409 -  -2.4  -3.01712   CCTCCTCGCCCAAGA                 GGCG GAG CGCT                 GGGGGAAAGGGTGCG  41 202
   TTMY_0368  317743 ..  317758 -  -8.2  -2.80994   GGGAAGCGGAGTAGA              GCCCCC CCGT GGAGGC               CTTAGGCCACCGGGG  54 27
   TTMY_0361  311343 ..  311355 -  -3.3  -2.79291   AAACCTCACTAACCA                CCCCG TAC CAGAG                CCTCCACGTCCTCCC  40 6
   TTMY_0360  309981 ..  310006 - -11.1  -3.04248   CAAGATGGCCGAAGA         CCCCCTTCCAG CCCC CGGGAAGGGGA          GGGGCCCAGGACTCA  62 38
   TTMY_0354 NONE
  TNMX_01100 NONE
TaqDRAFT_4390  303014 ..  303046 -    -4  -5.13344   ATACTAAGAGAAAAA     CCCAGGGGGAGTTCT TATT AGCCCTGCCCC-GGG      AGGAAGCCCAGGTTC  83 68
   TTMY_0351 NONE
   TTMY_0350  301831 ..  301864 - -19.5  -3.12351   CGCCCCCAGAGGTAA     GTACCCCACCGCGGC TTTC GCCGCGGTGGGGGCC      CCAAAAGGACCTTCC 100 117
   TTMY_0349 NONE
   TTMY_0348  300036 ..  300062 -  -5.1  -2.83403   CTCGCCCGAGGAAAG        GGCCCG-GGT-GG AAG CCTACCTCGGGCG        GGTGGACCTCCTGAA  44 419
   TTMY_0346  298530 ..  298559 -  -6.3  -5.03747   AAACCGTGTAAAAAA       CCTCACGGCCGGA AGGT CCCGGCCACGAAC        TCGCCCATGCCGCGG  86 98
    TTHA0994  298219 ..  298233 -  -3.5  -3.85698   GGCCTTTTCCAGAAA              GCCTCG GTAC CG-GGC               GTCTTCTGGGAGGTT  56 93
   TTMY_0343 NONE
   TTMY_0342  296595 ..  296615 - -11.8  -3.29273   TGGACGACTACAAGA            CGGACCGG GAGGT CCGGCCCG            AGGCCTACCGCCTCC  67 521
   TTMY_0335 NONE
   TTMY_0334  288045 ..  288071 -  -4.4  -2.97653   ACGGCGAGGAGAAAG         GGGAGCCATG CTTTCCT CATCACTCCC         ACTCTAGGGTTCGGA  45 54
   TTMY_0333 NONE
   TTMY_0332  285753 ..  285780 -    -4  -3.68359   GGCCTAAAAGCAGAA        GTAAGGCGAGGA GGAA CCCACGCCTCAT         GGCCCCACCCCCAGC  54 22
       hlyD1 NONE
   TTMY_0330 NONE
       macB2  282450 ..  282468 - -12.4  -3.01712   CCGCCGGGTCCAAGA             CCCTGGCC TTG GGCCAAGG             CCTGGCCAACCAGGA  67 85
  TSC_c02630  281762 ..  281776 -  -5.6  -4.14243   GAGGCTATCGTAAAA               CTCCTC CGC GAGGGG               CTAGGCGGCCCTGGC  64 218
   TTMY_0327 NONE
   TTMY_0326 NONE
   TTMY_0325 NONE
   TTMY_0324  280064 ..  280089 - -21.9  -3.56704   CGCCCACCAAAGGAA         CTCCCCCCGCC CTCG GGCGGGGGGAG          CCGGTTTTTAGCGGC 100 33
   TTMY_0322  278505 ..  278515 -  -2.4  -3.63922   AGCGCGGGCAAAAGA                 CGCG TCC CCCG                 AGGTCAAAACGCTCG  51 121
  TSC_c06730  275946 ..  275959 -  -3.7  -2.64155   CCCCCTCCAAACCCA               CCCGG CAAA CCCGG                CAACCCCCCTTCAAG  40 294
       polA1  274013 ..  274034 -    -8   -2.5955   AGGGGGTAGAAGTCA           CCCTCCTGG TGTAC CCAGG-GGG           TCGGGATCCCTGGTA  48 403
       polA1 NONE
  TNMX_12760  272389 ..  272425 -  -2.8  -3.01712   TTTCTTTCGCGAAGA   TGGCAGGGCGGCCTCGA GGCC CCGGGGCAACCC-GTCA    GCCCTTGACGGGGAG  42 326
   TTMY_0316  272052 ..  272094 - -10.6  -2.64155   CTTGCGCCAAAGCCA CCGGGCCCGGCGTAGGGC CCACCGCTT GCCC-AC-CCGGCCCCGG GCCAGCATCTTGGCG  59 65
   TTMY_0315  270777 ..  270804 - -17.8  -3.04902   CTCCAGGACACAAAG        CTTCCCCCCACG GTAG CGTGGGGGGAAA         ACCTTTAGCCGGTTT  86 59
   TTMY_0313  269614 ..  269651 - -15.6  -3.91911   TGGAGCTCAAGGAAA   CCGGCCTG-GGGGGCTT GGCGG ACACCCCCACAGGCCGG   AGGCTGGCGGAAGAG  90 61
   TTMY_0311  268175 ..  268211 -  -3.5  -3.78775   CTTCCCAGGAGTAAA    GGGAGCGCGGGAAGG GGGGCGG CCTGGCCGCCCTCCT    TCGGCTTAGGAAAGG  57 31
   TTMY_0295 NONE
   TTMY_0294  257173 ..  257184 -  -7.2  -2.90194   AGCGGGCCAAGGACA                CCGC CGCG GCGG                 CCGTCTTCCTGGCGA  50 134
   TTMY_0287  252121 ..  252137 -  -4.3  -2.78679   GCGGGGTACTTAAAC              CCCCAAG GCC CTAAGGG              CCGCCTCCTCCATCC  43 3
   TTMY_0286 NONE
   TTMY_0285 NONE
   TTMY_0284  250654 ..  250670 -  -3.5  -3.34398   CTTTGGGTTCAAAGA              GGGGCAG CAT CGGCTCC              ATGCTACAGGAGGAC  47 29
   TTMY_0283 NONE
   TTMY_0282  248158 ..  248178 -  -6.8  -2.78463   ATGGCGGCCACTATA            CCAGGGCT CCTTT AGCCCTTG            GCGGAAAGCCAGTCC  48 16
   TTMY_0281 NONE
   TTMY_0280 NONE
   TTMY_0279  245009 ..  245038 - -12.7  -3.14344   GAGGCGCCGGAGGAA       GGCCCGGGCCACG CCCC CGGGACCCTGGCC        GCGGCCCTTTGGGCC  67 226
        ileS  231726 ..  231756 -  -3.1  -3.53012   CCTCCCCCCGGTAAA       GCTTAGGGAGGCC TTTGC GGGGTCCCCATGC       TGGCTTGCGCCAGCA  49 49
   TTMY_0267 NONE
   TTMY_0266 NONE
   TTMY_0265  229757 ..  229786 - -10.7  -3.45023   GGAGGAGGAGGACAA       GGAGGAG-GAGGCG GCC CACCTCACACCTCC       CGCAGGTGGGCCCGG  68 16
   TTMY_0264 NONE
   TTMY_0259 NONE
        mraW NONE
   TTMY_0257 NONE
        ftsI NONE
   TTMY_0255 NONE
   TTMY_0254  220967 ..  220997 -  -3.9  -3.33492   GGACCCAGGCGAGAA      GGAGG-GCGGTGGC TAGG ACCATGGCACCTCC       CCGCAGCGGAGCTTC  47 7
   TTMY_0253 NONE
   TTMY_0252 NONE
   TTMY_0251  218888 ..  218904 -  -2.1  -3.29144   GGAGGGCGCTTAGAA              GGAGGAC GGG GTCCACG              GCTCACCTCCCAAGG  44 3
        ftsW  217809 ..  217846 -  -6.2  -3.02144   CCAGGGCGGGGAAGA   GGTGCCCCCCCGTGCCC CCGCC GGTCA-GGAGGATCACC   GGGCCACCTCCTTCC  49 21
        murG NONE
   TTMY_0248 NONE
   TTMY_0247 NONE
   TTMY_0246 NONE
   TTMY_0245 NONE
   TTMY_0244 NONE
   TTMY_0243  210774 ..  210791 -  -6.3  -3.14602   CCCACTTCATCAAGA             CGGTGGAG GAC CTCCA-CG             AGGCCCTGGTGACCG  51 525
   TTMY_0241  209463 ..  209504 - -20.1   -4.8543   TAATCCTGAGAAAAA CCGGGGCCCCCATGCTGGC TTGG GCCAGCATGGGGGAACCGC  CCTTAGGCGAGGGGG 100 28
   TTMY_0238  206040 ..  206067 -  -5.5  -4.76075   AGGAGAGCAAGAAAA        GGGGCCTAGAG CGCCTC CTCTACGCCCT         GGGGCTTCCGGGAGT  83 506
   TTMY_0236  203224 ..  203257 - -16.7  -4.17657   GAGTATACGGGAAAA     CCGGGGCCAAAAGGC CCCG GCCTTTGGGCCCCTG      CCCCTTAGCGGGTTT 100 30
   TTMY_0235  201628 ..  201664 - -15.8  -3.14344   GAGCTTCGCGAGTAA   GGCCACCCCACGCCGGC TTGC GCCGGCGTGCGG-GCCC    CGGCAAAAGGCCCTC  78 74
   TTMY_0227  195168 ..  195180 -  -3.3  -3.53811   GGCACCCCCGCGAAA                GGGGA GGG TCCCT                GGGCCGTGGTGGCCG  50 185
   TTMY_0224 NONE
   TTMY_0223  191733 ..  191746 -  -9.5  -3.07994   CCTAAGCCTAGCGAA               GGGCC CTGA GGCCC                AGAAGGAGGAAGAGC  59 4
   TTMY_0222  190126 ..  190156 -  -5.2  -3.16564   CGGCGACGTGATGAA       GGAGTCGGCCAGGG CCG CCCTCTCCTACGCC       AAGAAGAACGCCCAC  49 484
   TTMY_0219  187049 ..  187079 -  -4.6   -4.2828   CCTCACCGACGAAAA       GGGGGTGTACAC CGTGAGC GCCTTCACCCCC       GAGGTGGAGGGGGTC  67 184
   TTMY_0217 NONE
   TTMY_0216 NONE
   TTMY_0215  183861 ..  183879 - -10.2  -3.28712   CCTGGGCCGCCACAA             CGGGGTCT ACG AGGCCCCG             CGCGAGGTGCTAAAG  61 303
   TTMY_0213  181453 ..  181474 -  -2.1  -3.04144   TGCTCATGGGGAACA           CCCTCGAGG CCGC CCTCTTGAG            GCGCCATGGAGCTTC  41 462
   TTMY_0200 NONE
   TTMY_0199 NONE
HGMM_F04D06C07 NONE
   TTMY_0197 NONE
   TTMY_0196  169557 ..  169575 -  -3.1    -2.981   GGTCAAGGGACAAAG            GGC-CTAG GCTA CCAGAGCC             GCCACCCCGGCACGG  42 15
   TTMY_0195  168602 ..  168619 -  -9.8  -3.19425   AAGGAAGGCCAGGAA             GGGGCC TAGGGT GGCCCC              GAGGGTGTCCAGGCT  62 445
   TTMY_0194  168069 ..  168091 - -14.1  -3.36823   CCTTCCAAAAGCGAA           GGGCGGAGC TTTCG GCCCCGCCC           CCGACCTGTTCCCCA  77 43
   TTMY_0193 NONE
   TTMY_0192 NONE
   TTMY_0191  163991 ..  164015 -  -3.3  -4.17048   CCGGGCCCAAAAGAA          GCCTCGGCCCC AAG GGCTCCAGGGC          GTAGAGGAAGGCCAC  63 140
   TTMY_0186 NONE
   TTMY_0185  155845 ..  155859 -  -2.8  -3.01712   CGTCGTGGTCCAAGA               CTACGA GCA CCATAG               GCACCTCCTAGATGA  42 33
   TTMY_0184  154819 ..  154846 - -24.2  -2.70932   CTTTTCCCCTAAGTA        CCCCACCGCGGC TTTC GCCGCGGTGGGG         GCCCCAAAAGGACCT 100 92
   TTMY_0182 NONE
   TTMY_0181 NONE
   TTMY_0180  151926 ..  151941 -  -7.5  -3.55444   TGGGCACGGCGCAAA              GGGCC TGGATC GGCCC               CGAGCGGGTGCTCAA  58 73
   TTMY_0178  149958 ..  149982 -  -6.9   -3.1355   CGCATCCACATGGAA          GGGCGGGTGGC GGA GCCCGCCGCCT          TTGAGCGGGCCAACT  49 44
   TTMY_0176 NONE
   TTMY_0175  148275 ..  148315 - -18.4  -3.01712   CGTGGGCCTGGAAGA  CCCCCAGGACCTCCTC GCCCTCTTT GAGGAGGCCCTAGGGG  CGGTGTAGGTCTGTT  90 119
   TTMY_0173  146003 ..  146024 - -18.7  -3.64703   CTTCCTCCAGGCAAA           GGGGGCCCC AGGC GGGGCCCCC            AGGGCGTTCCTTCTC  95 44
   TTMY_0172 NONE
   TTMY_0171 NONE
   TTMY_0170  143259 ..  143286 -  -3.3   -3.0264   AAAGGGCCCTGAAGA        CCTCCAACCGC CCCCCT ACTGGTGGAGG         ACCCGCTCCAGGAAG  42 13
TaqDRAFT_3525  142650 ..  142686 -  -9.4  -3.33696   CCCCCGCCCAAGGAA   CCGCC--CAGGACGGCCC TCG AGGCCGCCCTCCTGGCGG   GCGAGGCGAGCCGGA  61 209
        trpC NONE
   TTMY_0164 NONE
   TTMY_0163  139149 ..  139193 -  -4.2   -2.9462   GAGGGAGGGAAAGCA CCCGCCAGCGGACCCGG TCCCTCATGCCT CCAGGTCC-CGGTCGGG GATGCGGGGGATCTC  44 2
   TTMY_0162 NONE
Ththe16_1182 NONE
   TTMY_0160 NONE
   TTMY_0159  135898 ..  135925 - -22.8  -2.75064   GGGGTCATTTAAGTA        CCCCGCTCTGGC TTGC GCCAGAGCGGGG         GCCCCAAAAGAGCCT 100 93
   TTMY_0156  133297 ..  133312 -  -6.8  -2.90075   CCCTGGTCAAGTAGA              GTGCAC ATTA GCGCAC               TCCGGCCCCCCACCA  50 1
   TTMY_0155  131942 ..  131979 -  -4.5  -2.55074   TCTAAGGGCAACCGA   GGGGGAAGGCCCGGGGG CAGG CCCTCGTGCCCGCTTCC    CCTACCAGGCCCGGA  42 27
   TTMY_0139  120478 ..  120506 - -19.5  -3.16564   GCGGGATGTGAGGAA        CGAGCCGGGGCCC TCA GGACCCCGGCGCG        GCCACGGGGAAACCT 100 40
   TTMY_0138 NONE
   TTMY_0137  118474 ..  118484 -  -8.2   -3.1994   GAGAGCAGGGATGAA                 GCCC TTA GGGC                 CTTGGAGGAGGTGAA  56 294
   TTMY_0124  108848 ..  108860 -  -7.7  -3.87956   AAAACGGAGATTAAA                GCTCT ATG AGAGC                CTGGCGTGCAGGACG  66 474
TaqDRAFT_5250 NONE
   TTMY_0118 NONE
TaqDRAFT_5251 NONE
   TTMY_0116   99954 ..   99975 -    -8   -2.5955   AGGGGGTAGAAGTCA           CCCTCCTGG TGTAC CCAGG-GGG           TCGGGATCCCTGGTA  48 461
   TTMY_0114 NONE
   Cagg_3814 NONE
   Cagg_3813 NONE
   Adeg_0914 NONE
   TTMY_0109   90021 ..   90054 -  -8.2  -3.66803   CGTCAAGATGGTAAA     GGGGGTGCTCACG ATCTTGCCG CATG-GCACCCCC     TCTTTTTTCACACCC  65 33
   TTMY_0108 NONE
   TTMY_0107 NONE
   Cagg_3811   88361 ..   88402 -  -3.5  -3.06831   GCAAGGGCGAGCGAA GCCGCCACACCCAGCGGTA GAGC TCCCACTTCATGCGGCGCC  CTCGTCTCTAGCTTT  44 14
   Adeg_0917 NONE
     TTHB026   87116 ..   87140 -  -9.2  -2.70932   GCTTCCCCGCAAGCA         CGCCCCGCTCC TCCC GG-GCGGGGAG          GAAGCGGAAAAGGAG  55 103
 TtJL18_2198 NONE
   TTMY_0102 NONE
   TTMY_0101   84216 ..   84233 -  -4.7  -2.71791   ATTTTCCGGTTAAAC             CGCACCC CACC GGGCGCC              TCGGCCTCGCTTAGG  43 123
       b-gal   83596 ..   83649 - -14.5  -3.53012   TTTCCGGCCGCCAAA GGAGGCCTTCCGGGTTCCCCCTC GCGGGGAG GCCGAGGAACCCGGAGGCCCTCC CCTCGAGGAGGGGGA  81 85
   TTMY_0099 NONE
   TTMY_0098   80364 ..   80379 -  -8.2  -3.53012   CCCTCCCCCGCCAAA              GGAGGC GGAA GCCCCC               TCGGCCGGGAAGAGG  62 56
   TTMY_0097 NONE
   TTMY_0096 NONE
   TTMY_0095 NONE
   TTMY_0094   76667 ..   76688 -    -8   -2.5955   AGGGGGTAGAAGTCA           CCCTCCTGG TGTAC CCAGG-GGG           TCGGGATCCCTGGTA  48 403
   TTMY_0092 NONE
 TtJL18_2211   74466 ..   74489 -  -2.3  -3.54129   GAGACCCTCCCCAAA          GCCCACG CCCTCCTCCT CGGGGGC           GGCTACCCCGAGCTC  48 506
   TTMY_0081 NONE
        cbiD NONE
        cbiD NONE
   TTMY_0078 NONE
   TTMY_0077 NONE
   TTMY_0076 NONE
   TTMY_0075 NONE
   TTMY_0074 NONE
   TTMY_0073 NONE
   TTMY_0072 NONE
   TTMY_0071 NONE
   TTMY_0070 NONE
   TTMY_0069 NONE
   TTMY_0068   57669 ..   57680 -  -2.2  -3.57144   TGCGCCACCCCCAAA                GCCT ACCA AAGC                 CCCGTGGCCGCCGCG  48 16
   TTMY_0066 NONE
   TTMY_0065   55890 ..   55906 -  -2.2  -3.31144   TCCGGAGTTGCAGAA              CCCCGT ACCTG ACGAAG              AGCTTGAGGTTCAGG  44 36
   TTMY_0064 NONE
   TTMY_0063   54592 ..   54604 -  -3.3  -2.57881   GAAGTGGCGGAGAAG                CCCCG CGG CGAAG                AGGCTTTTCCCCACC  39 102
   TTMY_0062   52396 ..   52408 -  -6.2  -3.60971   AGCGGAACGCCCAAA                GGCC CGACC GGCC                CAACATCGGCTATGG  59 257
TaqDRAFT_4008 NONE
TaqDRAFT_4009   46356 ..   46394 -  -3.6  -3.70919   CCCAAAGGGCAAGAA   GCCACGGGCCAAGGACGC GCC ACGTCCTCGTCACGCTCC   CACCCCTTCACCGAA  54 17
TaqDRAFT_4010 NONE
TaqDRAFT_4011   44306 ..   44331 - -12.5  -2.52896   TTATTTGTCAACTTA         TTGAGGCCGGG CCAG CCCGGCCCCAG          CCGGATCCCTTAGTG  63 35
   TTMY_0052   43662 ..   43718 -    -7  -2.71144   GAGGCCCCTCAAGGA GGCGGAGGAGGGGACGGACCGCTGGGC GGTG GCCCAGGGCTTCGTTTCCGCCAC-GCC CCTCCGCCTGGACCT  46 160
   TTMY_0049   40916 ..   40930 -  -3.5  -3.95852   ACGCCACCAAGGAAA              CCGTCC ACCT GG-CGG               TCCTGGATGGAAAGG  59 440
   TTMY_0047   39776 ..   39798 - -16.2  -4.57073   CATGCGCGGCAAAAA           GGCCCCCCGG AGC CCGGGGGGCG           AAAGGACTACTTCCT 100 32
   TTMY_0046 NONE
   TTMY_0045 NONE
   TTMY_0044 NONE
   TTMY_0043 NONE
   TTMY_0042 NONE
   TTMY_0041   34431 ..   34468 - -13.3  -4.07568   CGCCTTCTTCTAAAA   GCC-CTGCTCCGACCCCC TGG GGGAGCCGGGGCGGTGGC   CGTTCCCAGGCGGCG  85 184
   TTMY_0040   33040 ..   33069 -  -9.9  -3.14463   AAGGGGCGGGATCAA       CACGCGGGCGC TCAGGTTT GGGCCCGCGCG        ATCCGCTCCCGGAAC  62 269
   TTMY_0033   27728 ..   27745 -  -9.8  -3.68351   CCTCCAGGACCCAAA             GGGCCC CGCCCC GGGCCC              GGTAGGCCTCCCTAA  70 209
   TTMY_0032 NONE
   TTMY_0031 NONE
   TTMY_0030 NONE
   TTMY_0029 NONE
   TTMY_0028 NONE
   TTMY_0027 NONE
   TTMY_0026 NONE
   TTMY_0025   22105 ..   22115 -  -4.6  -2.87132   GGCCTGGCCCACACA                 GGGA TTG CCCC                 GGGGGAGAAGGTGGG  44 60
   TTMY_0024 NONE
   TTMY_0023   20506 ..   20519 -  -9.5  -3.28712   CCCGCGCCTCCACAA               GGCCC TTGG GGGCC                TTTTCCAGGCCCAGG  61 81
   TTMY_0022   19440 ..   19486 -  -2.2  -3.54424   CTGGACCTGGGGAAA GCGG-GCGAGGACTTCGCGAAG GCTTT CTTC-CGGGGCCCTCACGCCTC CAGTCTACACCCGCT  48 30
   TTMY_0021 NONE
 TtJL18_2275   18698 ..   18713 -  -8.2  -3.25823   CGGGGCCTAGAGGAA              CCGGGC GAAG ACCCGG               CCCAGGGCCTCGAGG  58 1
  Pecwa_1644   18135 ..   18145 -  -2.4  -3.53012   GGGGTGGTGGGGAAA                 GGCC CCG GGCT                 TTTCGCCAAGGCGGT  48 86
   TTMY_2579   15416 ..   15427 -  -5.8  -3.54424   CGGGAGGCGGCGAAA                GAGG CCTA CCTC                 CTCTTCTGCGGGGCC  53 169
   TTMY_2577 NONE
Syn6312_1034   13097 ..   13119 - -10.4  -2.52896   CCAGGGGGGAAGCGA           CCTCGGGGCG AAC CGCACCGTGG           CCCGCAGGGAAGGGG  56 209
TaqDRAFT_3220   11441 ..   11453 -  -4.8  -3.13403   GGCTTTTGACGAACA                CAGG TTGGG CCTG                AAGCCCGTGTACCGG  47 136
   TTMY_2571   10952 ..   11000 -  -5.8  -3.57144   CCCTCTACCGGGAAA GCGAAGACCCCGTGGAACGCGCC CGCT GGCACG-CCATCTGGCTCCTCGC CACAGGCCACTCCAT  53 92
        pilA NONE
     WG13_10    7527 ..    7541 -  -4.2  -3.96224   CAAAGGAGGGACAAA               GGTATG GCG CAAACC               CTGAGCCGGAGGCGT  61 522
   TTMY_0008    6752 ..    6763 -  -7.2  -3.17194   ACCTTTGCAAGGCAA                GCCC CCCG GGGC                 TTGACGGGGCCGGGG  54 225
 TtJL18_1671 NONE
  Theos_2371    5590 ..    5606 -  -4.3  -3.92522   GGTCAAGGGGAGAAA              GCGCCAG ATC CTGACGG              ACACGGGGGGCCGCT  61 34
   TTMY_2561 NONE
   Mrub_3032 NONE
  Theos_2366 NONE
   TTMY_2558 NONE
  Mesil_3145    2675 ..    2687 -  -3.3  -2.87211   ATCCTGGCGCAGACA                GGCAA CGA TGGCC                TTGGCTACTACGCGG   0 117
