TVNIR_0001 SM00382 ATPases associated with a variety of cellular activities TVNIR_0028 SM00670 Large family of predicted nucleotide-binding domains TVNIR_0038 SM00966 SpoVT / AbrB like domain TVNIR_0040 SM01321 TVNIR_0040 TVNIR_0058 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TVNIR_0060 SM00984 UDP binding domain TVNIR_0085 SM00382 ATPases associated with a variety of cellular activities TVNIR_0085 SM01086 C-terminal, D2-small domain, of ClpB protein TVNIR_0101 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain TVNIR_0101 SM01232 TVNIR_0101 TVNIR_0110 SM00382 ATPases associated with a variety of cellular activities TVNIR_0112 SM00421 helix_turn_helix, Lux Regulon TVNIR_0117 SM00854 Bacterial capsule synthesis protein PGA_cap TVNIR_0122 SM00382 ATPases associated with a variety of cellular activities TVNIR_0128 SM00267 diguanylate cyclase TVNIR_0152 SM00487 DEAD-like helicases superfamily TVNIR_0152 SM00490 helicase superfamily c-terminal domain TVNIR_0154 SM00347 helix_turn_helix multiple antibiotic resistance protein TVNIR_0163 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase TVNIR_0167 SM00904 Riboflavin kinase TVNIR_0173 SM00448 cheY-homologous receiver domain TVNIR_0173 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TVNIR_0174 SM00387 Histidine kinase-like ATPases TVNIR_0174 SM00388 His Kinase A (phosphoacceptor) domain TVNIR_0174 SM00448 cheY-homologous receiver domain TVNIR_0183 SM00382 ATPases associated with a variety of cellular activities TVNIR_0189 SM01207 TVNIR_0189 TVNIR_0207 SM00382 ATPases associated with a variety of cellular activities TVNIR_0208 SM00382 ATPases associated with a variety of cellular activities TVNIR_0208 SM00962 SRP54-type protein, GTPase domain TVNIR_0208 SM00963 SRP54-type protein, helical bundle domain TVNIR_0215 SM00421 helix_turn_helix, Lux Regulon TVNIR_0215 SM00448 cheY-homologous receiver domain TVNIR_0223 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TVNIR_0223 SM00475 5'-3' exonuclease TVNIR_0225 SM00919 Malic enzyme, NAD binding domain TVNIR_0225 SM01274 TVNIR_0225 TVNIR_0228 SM00729 Elongator protein 3, MiaB family, Radical SAM TVNIR_0232 SM01209 TVNIR_0232 TVNIR_0232 SM01210 TVNIR_0232 TVNIR_0233 SM00798 AICARFT/IMPCHase bienzyme TVNIR_0233 SM00851 MGS-like domain TVNIR_0239 SM01018 B12 binding domain TVNIR_0250 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TVNIR_0250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVNIR_0255 SM00382 ATPases associated with a variety of cellular activities TVNIR_0264 SM00028 Tetratricopeptide repeats TVNIR_0270 SM00028 Tetratricopeptide repeats TVNIR_0271 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVNIR_0271 SM00387 Histidine kinase-like ATPases TVNIR_0272 SM00421 helix_turn_helix, Lux Regulon TVNIR_0272 SM00448 cheY-homologous receiver domain TVNIR_0292 SM00992 Hemimethylated DNA-binding protein YccV like TVNIR_0305 SM00732 Likely ribonuclease with RNase H fold. TVNIR_0324 SM00450 Rhodanese Homology Domain TVNIR_0324 SM00849 Metallo-beta-lactamase superfamily TVNIR_0338 SM00996 S-adenosyl-L-homocysteine hydrolase TVNIR_0338 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TVNIR_0340 SM00861 Transketolase, pyrimidine binding domain TVNIR_0341 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TVNIR_0347 SM01001 AIR carboxylase TVNIR_0361 SM00100 Cyclic nucleotide-monophosphate binding domain TVNIR_0361 SM00419 helix_turn_helix, cAMP Regulatory protein TVNIR_0403 SM00729 Elongator protein 3, MiaB family, Radical SAM TVNIR_0403 SM00876 Biotin and Thiamin Synthesis associated domain TVNIR_0409 SM01004 Delta-aminolevulinic acid dehydratase TVNIR_0413 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TVNIR_0413 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TVNIR_0413 SM00493 TVNIR_0413 TVNIR_0421 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVNIR_0421 SM00387 Histidine kinase-like ATPases TVNIR_0421 SM00388 His Kinase A (phosphoacceptor) domain TVNIR_0422 SM00382 ATPases associated with a variety of cellular activities TVNIR_0422 SM00448 cheY-homologous receiver domain TVNIR_0424 SM00028 Tetratricopeptide repeats TVNIR_0426 SM00880 TVNIR_0426 TVNIR_0431 SM00905 Dihydroneopterin aldolase TVNIR_0433 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_0435 SM00938 Nitrogen regulatory protein P-II TVNIR_0437 SM00382 ATPases associated with a variety of cellular activities TVNIR_0460 SM00450 Rhodanese Homology Domain TVNIR_0463 SM01091 Transporter associated domain TVNIR_0466 SM00644 TVNIR_0466 TVNIR_0467 SM00855 Phosphoglycerate mutase family TVNIR_0473 SM00878 Biotin carboxylase C-terminal domain TVNIR_0483 SM00883 Chaperonin 10 Kd subunit TVNIR_0487 SM00382 ATPases associated with a variety of cellular activities TVNIR_0493 SM00382 ATPases associated with a variety of cellular activities TVNIR_0499 SM00382 ATPases associated with a variety of cellular activities TVNIR_0508 SM00267 diguanylate cyclase TVNIR_0517 SM00530 Helix-turn-helix XRE-family like proteins TVNIR_0519 SM00670 Large family of predicted nucleotide-binding domains TVNIR_0520 SM00966 SpoVT / AbrB like domain TVNIR_0522 SM00530 Helix-turn-helix XRE-family like proteins TVNIR_0537 SM00448 cheY-homologous receiver domain TVNIR_0537 SM00850 LytTr DNA-binding domain TVNIR_0540 SM00267 diguanylate cyclase TVNIR_0556 SM00448 cheY-homologous receiver domain TVNIR_0556 SM00862 Transcriptional regulatory protein, C terminal TVNIR_0557 SM00387 Histidine kinase-like ATPases TVNIR_0567 SM00382 ATPases associated with a variety of cellular activities TVNIR_0571 SM00052 Putative diguanylate phosphodiesterase TVNIR_0571 SM00267 diguanylate cyclase TVNIR_0576 SM00822 TVNIR_0576 TVNIR_0593 SM00382 ATPases associated with a variety of cellular activities TVNIR_0597 SM00382 ATPases associated with a variety of cellular activities TVNIR_0616 SM01027 Beta-Casp domain TVNIR_0635 SM00530 Helix-turn-helix XRE-family like proteins TVNIR_0654 SM00966 SpoVT / AbrB like domain TVNIR_0658 SM00347 helix_turn_helix multiple antibiotic resistance protein TVNIR_0670 SM00347 helix_turn_helix multiple antibiotic resistance protein TVNIR_0670 SM00419 helix_turn_helix, cAMP Regulatory protein TVNIR_0671 SM00984 UDP binding domain TVNIR_0681 SM00849 Metallo-beta-lactamase superfamily TVNIR_0681 SM01027 Beta-Casp domain TVNIR_0686 SM00984 UDP binding domain TVNIR_0721 SM00530 Helix-turn-helix XRE-family like proteins TVNIR_0728 SM00530 Helix-turn-helix XRE-family like proteins TVNIR_0740 SM00530 Helix-turn-helix XRE-family like proteins TVNIR_0743 SM01321 TVNIR_0743 TVNIR_0747 SM00530 Helix-turn-helix XRE-family like proteins TVNIR_0751 SM00966 SpoVT / AbrB like domain TVNIR_0753 SM00530 Helix-turn-helix XRE-family like proteins TVNIR_0765 SM00966 SpoVT / AbrB like domain TVNIR_0770 SM00465 GIY-YIG type nucleases (URI domain) TVNIR_0783 SM00382 ATPases associated with a variety of cellular activities TVNIR_0794 SM00465 GIY-YIG type nucleases (URI domain) TVNIR_0804 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVNIR_0804 SM00387 Histidine kinase-like ATPases TVNIR_0804 SM00388 His Kinase A (phosphoacceptor) domain TVNIR_0805 SM00448 cheY-homologous receiver domain TVNIR_0805 SM00862 Transcriptional regulatory protein, C terminal TVNIR_0809 SM00382 ATPases associated with a variety of cellular activities TVNIR_0811 SM00493 TVNIR_0811 TVNIR_0817 SM00479 TVNIR_0817 TVNIR_0823 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TVNIR_0825 SM00838 Elongation factor G C-terminus TVNIR_0828 SM00358 Double-stranded RNA binding motif TVNIR_0828 SM00535 Ribonuclease III family TVNIR_0838 SM00382 ATPases associated with a variety of cellular activities TVNIR_0846 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. TVNIR_0872 SM00562 TVNIR_0872 TVNIR_0874 SM00028 Tetratricopeptide repeats TVNIR_0878 SM00564 beta-propeller repeat TVNIR_0879 SM00382 ATPases associated with a variety of cellular activities TVNIR_0884 SM00840 TVNIR_0884 TVNIR_0886 SM00052 Putative diguanylate phosphodiesterase TVNIR_0886 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVNIR_0886 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVNIR_0886 SM00091 PAS domain TVNIR_0886 SM00267 diguanylate cyclase TVNIR_0889 SM00267 diguanylate cyclase TVNIR_0891 SM00448 cheY-homologous receiver domain TVNIR_0891 SM00862 Transcriptional regulatory protein, C terminal TVNIR_0892 SM00091 PAS domain TVNIR_0892 SM00387 Histidine kinase-like ATPases TVNIR_0892 SM00388 His Kinase A (phosphoacceptor) domain TVNIR_0893 SM00671 Sel1-like repeats. TVNIR_0899 SM00382 ATPases associated with a variety of cellular activities TVNIR_0923 SM00487 DEAD-like helicases superfamily TVNIR_0928 SM00421 helix_turn_helix, Lux Regulon TVNIR_0929 SM00248 ankyrin repeats TVNIR_0936 SM00382 ATPases associated with a variety of cellular activities TVNIR_0941 SM00849 Metallo-beta-lactamase superfamily TVNIR_0949 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TVNIR_0953 SM00387 Histidine kinase-like ATPases TVNIR_0953 SM00388 His Kinase A (phosphoacceptor) domain TVNIR_0954 SM00382 ATPases associated with a variety of cellular activities TVNIR_0954 SM00448 cheY-homologous receiver domain TVNIR_0955 SM00450 Rhodanese Homology Domain TVNIR_0958 SM00855 Phosphoglycerate mutase family TVNIR_0961 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_0971 SM00382 ATPases associated with a variety of cellular activities TVNIR_0974 SM00450 Rhodanese Homology Domain TVNIR_0977 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TVNIR_0983 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TVNIR_1017 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVNIR_1017 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVNIR_1020 SM00267 diguanylate cyclase TVNIR_1021 SM00342 helix_turn_helix, arabinose operon control protein TVNIR_1049 SM00530 Helix-turn-helix XRE-family like proteins TVNIR_1050 SM00487 DEAD-like helicases superfamily TVNIR_1052 SM00091 PAS domain TVNIR_1052 SM00387 Histidine kinase-like ATPases TVNIR_1061 SM01011 Aminopeptidase P, N-terminal domain TVNIR_1072 SM00382 ATPases associated with a variety of cellular activities TVNIR_1079 SM00450 Rhodanese Homology Domain TVNIR_1081 SM00563 Phosphate acyltransferases TVNIR_1091 SM00382 ATPases associated with a variety of cellular activities TVNIR_1095 SM00563 Phosphate acyltransferases TVNIR_1100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVNIR_1100 SM00387 Histidine kinase-like ATPases TVNIR_1100 SM00388 His Kinase A (phosphoacceptor) domain TVNIR_1101 SM00448 cheY-homologous receiver domain TVNIR_1101 SM00862 Transcriptional regulatory protein, C terminal TVNIR_1111 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_1113 SM00642 Alpha-amylase domain TVNIR_1114 SM00642 Alpha-amylase domain TVNIR_1115 SM00642 Alpha-amylase domain TVNIR_1122 SM00100 Cyclic nucleotide-monophosphate binding domain TVNIR_1122 SM00419 helix_turn_helix, cAMP Regulatory protein TVNIR_1123 SM00478 endonuclease III TVNIR_1137 SM01126 TVNIR_1137 TVNIR_1145 SM00953 TVNIR_1145 TVNIR_1165 SM00460 Transglutaminase/protease-like homologues TVNIR_1185 SM00506 Appr-1"-p processing enzyme TVNIR_1192 SM00382 ATPases associated with a variety of cellular activities TVNIR_1203 SM00271 DnaJ molecular chaperone homology domain TVNIR_1208 SM00344 helix_turn_helix ASNC type TVNIR_1210 SM00917 LeuA allosteric (dimerisation) domain TVNIR_1213 SM01329 TVNIR_1213 TVNIR_1214 SM00859 Semialdehyde dehydrogenase, NAD binding domain TVNIR_1229 SM00460 Transglutaminase/protease-like homologues TVNIR_1231 SM00382 ATPases associated with a variety of cellular activities TVNIR_1233 SM00382 ATPases associated with a variety of cellular activities TVNIR_1237 SM00062 Bacterial periplasmic substrate-binding proteins TVNIR_1238 SM00822 TVNIR_1238 TVNIR_1258 SM00100 Cyclic nucleotide-monophosphate binding domain TVNIR_1258 SM00419 helix_turn_helix, cAMP Regulatory protein TVNIR_1265 SM00642 Alpha-amylase domain TVNIR_1272 SM00671 Sel1-like repeats. TVNIR_1276 SM00855 Phosphoglycerate mutase family TVNIR_1300 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TVNIR_1305 SM00028 Tetratricopeptide repeats TVNIR_1321 SM00382 ATPases associated with a variety of cellular activities TVNIR_1322 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TVNIR_1323 SM00756 TVNIR_1323 TVNIR_1329 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TVNIR_1335 SM01152 TVNIR_1335 TVNIR_1343 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_1346 SM01160 TVNIR_1346 TVNIR_1356 SM00382 ATPases associated with a variety of cellular activities TVNIR_1363 SM00421 helix_turn_helix, Lux Regulon TVNIR_1363 SM00448 cheY-homologous receiver domain TVNIR_1364 SM00387 Histidine kinase-like ATPases TVNIR_1364 SM00388 His Kinase A (phosphoacceptor) domain TVNIR_1371 SM00878 Biotin carboxylase C-terminal domain TVNIR_1376 SM01118 TVNIR_1376 TVNIR_1377 SM00986 Uracil DNA glycosylase superfamily TVNIR_1377 SM00987 UreE urease accessory protein, C-terminal domain TVNIR_1378 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TVNIR_1378 SM00465 GIY-YIG type nucleases (URI domain) TVNIR_1388 SM00849 Metallo-beta-lactamase superfamily TVNIR_1394 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TVNIR_1397 SM01321 TVNIR_1397 TVNIR_1405 SM00091 PAS domain TVNIR_1405 SM00267 diguanylate cyclase TVNIR_1405 SM01079 TVNIR_1405 TVNIR_1420 SM00771 ZipA, C-terminal domain (FtsZ-binding) TVNIR_1421 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TVNIR_1421 SM00292 breast cancer carboxy-terminal domain TVNIR_1421 SM00532 Ligase N family TVNIR_1432 SM00852 Probable molybdopterin binding domain TVNIR_1433 SM00363 S4 RNA-binding domain TVNIR_1436 SM00937 TVNIR_1436 TVNIR_1440 SM00838 Elongation factor G C-terminus TVNIR_1440 SM00889 Elongation factor G, domain IV TVNIR_1451 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TVNIR_1451 SM00534 ATPase domain of DNA mismatch repair MUTS family TVNIR_1453 SM00382 ATPases associated with a variety of cellular activities TVNIR_1455 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TVNIR_1499 SM00052 Putative diguanylate phosphodiesterase TVNIR_1499 SM00267 diguanylate cyclase TVNIR_1501 SM00271 DnaJ molecular chaperone homology domain TVNIR_1505 SM00382 ATPases associated with a variety of cellular activities TVNIR_1516 SM00091 PAS domain TVNIR_1516 SM00387 Histidine kinase-like ATPases TVNIR_1517 SM00421 helix_turn_helix, Lux Regulon TVNIR_1517 SM00448 cheY-homologous receiver domain TVNIR_1527 SM00357 Cold shock protein domain TVNIR_1529 SM00704 CDGSH-type zinc finger. Function unknown. TVNIR_1530 SM00729 Elongator protein 3, MiaB family, Radical SAM TVNIR_1534 SM00382 ATPases associated with a variety of cellular activities TVNIR_1536 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TVNIR_1538 SM00382 ATPases associated with a variety of cellular activities TVNIR_1544 SM00450 Rhodanese Homology Domain TVNIR_1546 SM00267 diguanylate cyclase TVNIR_1568 SM00155 Phospholipase D. Active site motifs. TVNIR_1569 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. TVNIR_1576 SM01329 TVNIR_1576 TVNIR_1578 SM00382 ATPases associated with a variety of cellular activities TVNIR_1578 SM01086 C-terminal, D2-small domain, of ClpB protein TVNIR_1579 SM00316 Ribosomal protein S1-like RNA-binding domain TVNIR_1580 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TVNIR_1581 SM00822 TVNIR_1581 TVNIR_1582 SM00823 Phosphopantetheine attachment site TVNIR_1583 SM00825 Beta-ketoacyl synthase TVNIR_1592 SM00382 ATPases associated with a variety of cellular activities TVNIR_1600 SM00450 Rhodanese Homology Domain TVNIR_1610 SM00487 DEAD-like helicases superfamily TVNIR_1610 SM00490 helicase superfamily c-terminal domain TVNIR_1623 SM00382 ATPases associated with a variety of cellular activities TVNIR_1629 SM00382 ATPases associated with a variety of cellular activities TVNIR_1631 SM01359 TVNIR_1631 TVNIR_1631 SM01360 TVNIR_1631 TVNIR_1633 SM00248 ankyrin repeats TVNIR_1634 SM00900 TVNIR_1634 TVNIR_1635 SM00710 Parallel beta-helix repeats TVNIR_1635 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses TVNIR_1636 SM00382 ATPases associated with a variety of cellular activities TVNIR_1648 SM00729 Elongator protein 3, MiaB family, Radical SAM TVNIR_1658 SM00327 von Willebrand factor (vWF) type A domain TVNIR_1664 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TVNIR_1668 SM00642 Alpha-amylase domain TVNIR_1685 SM00849 Metallo-beta-lactamase superfamily TVNIR_1709 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TVNIR_1709 SM00450 Rhodanese Homology Domain TVNIR_1711 SM00450 Rhodanese Homology Domain TVNIR_1715 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TVNIR_1716 SM01092 CO dehydrogenase flavoprotein C-terminal domain TVNIR_1726 SM00487 DEAD-like helicases superfamily TVNIR_1726 SM00490 helicase superfamily c-terminal domain TVNIR_1728 SM00953 TVNIR_1728 TVNIR_1734 SM00255 Toll - interleukin 1 - resistance TVNIR_1744 SM00320 WD40 repeats TVNIR_1752 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TVNIR_1756 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVNIR_1756 SM00387 Histidine kinase-like ATPases TVNIR_1757 SM00421 helix_turn_helix, Lux Regulon TVNIR_1757 SM00448 cheY-homologous receiver domain TVNIR_1761 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_1791 SM00450 Rhodanese Homology Domain TVNIR_1802 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TVNIR_1803 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family TVNIR_1805 SM00411 bacterial (prokaryotic) histone like domain TVNIR_1806 SM00316 Ribosomal protein S1-like RNA-binding domain TVNIR_1811 SM00830 Chorismate mutase type II TVNIR_1814 SM00434 DNA Topoisomerase IV TVNIR_1816 SM00849 Metallo-beta-lactamase superfamily TVNIR_1818 SM00382 ATPases associated with a variety of cellular activities TVNIR_1824 SM00487 DEAD-like helicases superfamily TVNIR_1824 SM00490 helicase superfamily c-terminal domain TVNIR_1824 SM00982 TVNIR_1824 TVNIR_1824 SM01058 CarD-like/TRCF domain TVNIR_1828 SM00363 S4 RNA-binding domain TVNIR_1830 SM00316 Ribosomal protein S1-like RNA-binding domain TVNIR_1831 SM00226 Low molecular weight phosphatase family TVNIR_1832 SM01211 TVNIR_1832 TVNIR_1836 SM00984 UDP binding domain TVNIR_1841 SM00382 ATPases associated with a variety of cellular activities TVNIR_1853 SM00487 DEAD-like helicases superfamily TVNIR_1862 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_1876 SM00382 ATPases associated with a variety of cellular activities TVNIR_1888 SM01192 TVNIR_1888 TVNIR_1888 SM01193 TVNIR_1888 TVNIR_1891 SM00977 TilS substrate C-terminal domain TVNIR_1893 SM00481 DNA polymerase alpha chain like domain TVNIR_1908 SM00382 ATPases associated with a variety of cellular activities TVNIR_1924 SM00382 ATPases associated with a variety of cellular activities TVNIR_1938 SM00257 Lysin motif TVNIR_1951 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TVNIR_1951 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TVNIR_1952 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TVNIR_1963 SM00935 Outer membrane protein (OmpH-like) TVNIR_1965 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TVNIR_1974 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TVNIR_1976 SM00487 DEAD-like helicases superfamily TVNIR_1976 SM00490 helicase superfamily c-terminal domain TVNIR_1976 SM00847 Helicase associated domain (HA2) Add an annotation TVNIR_1980 SM00248 ankyrin repeats TVNIR_1983 SM00248 ankyrin repeats TVNIR_1986 SM00382 ATPases associated with a variety of cellular activities TVNIR_1988 SM00954 Region found in RelA / SpoT proteins TVNIR_1993 SM00382 ATPases associated with a variety of cellular activities TVNIR_1998 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain TVNIR_2007 SM00052 Putative diguanylate phosphodiesterase TVNIR_2007 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVNIR_2007 SM00091 PAS domain TVNIR_2007 SM00267 diguanylate cyclase TVNIR_2021 SM00382 ATPases associated with a variety of cellular activities TVNIR_2034 SM00450 Rhodanese Homology Domain TVNIR_2063 SM00100 Cyclic nucleotide-monophosphate binding domain TVNIR_2073 SM00769 Water Stress and Hypersensitive response TVNIR_2080 SM00052 Putative diguanylate phosphodiesterase TVNIR_2080 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVNIR_2080 SM00091 PAS domain TVNIR_2080 SM00267 diguanylate cyclase TVNIR_2084 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TVNIR_2115 SM01043 Bacterial transcriptional activator domain TVNIR_2128 SM00028 Tetratricopeptide repeats TVNIR_2130 SM00382 ATPases associated with a variety of cellular activities TVNIR_2160 SM00327 von Willebrand factor (vWF) type A domain TVNIR_2173 SM00100 Cyclic nucleotide-monophosphate binding domain TVNIR_2173 SM00419 helix_turn_helix, cAMP Regulatory protein TVNIR_2183 SM00729 Elongator protein 3, MiaB family, Radical SAM TVNIR_2184 SM00849 Metallo-beta-lactamase superfamily TVNIR_2184 SM01027 Beta-Casp domain TVNIR_2193 SM00849 Metallo-beta-lactamase superfamily TVNIR_2196 SM00729 Elongator protein 3, MiaB family, Radical SAM TVNIR_2200 SM00936 Penicillin-binding protein 5, C-terminal domain TVNIR_2209 SM00650 Ribosomal RNA adenine dimethylases TVNIR_2213 SM00422 helix_turn_helix, mercury resistance TVNIR_2214 SM00411 bacterial (prokaryotic) histone like domain TVNIR_2215 SM00873 B3/4 domain TVNIR_2215 SM00874 tRNA synthetase B5 domain TVNIR_2215 SM00896 Ferredoxin-fold anticodon binding domain TVNIR_2220 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TVNIR_2253 SM01323 TVNIR_2253 TVNIR_2258 SM00487 DEAD-like helicases superfamily TVNIR_2258 SM00490 helicase superfamily c-terminal domain TVNIR_2270 SM01321 TVNIR_2270 TVNIR_2275 SM01321 TVNIR_2275 TVNIR_2276 SM00487 DEAD-like helicases superfamily TVNIR_2276 SM00490 helicase superfamily c-terminal domain TVNIR_2278 SM00487 DEAD-like helicases superfamily TVNIR_2278 SM00490 helicase superfamily c-terminal domain TVNIR_2293 SM00369 Leucine-rich repeats, typical (most populated) subfamily TVNIR_2294 SM00947 Carbonic anhydrase TVNIR_2307 SM00822 TVNIR_2307 TVNIR_2312 SM00342 helix_turn_helix, arabinose operon control protein TVNIR_2359 SM00382 ATPases associated with a variety of cellular activities TVNIR_2360 SM00382 ATPases associated with a variety of cellular activities TVNIR_2370 SM00287 Bacterial SH3 domain homologues TVNIR_2376 SM01007 Class II Aldolase and Adducin N-terminal domain TVNIR_2383 SM00900 TVNIR_2383 TVNIR_2386 SM00478 endonuclease III TVNIR_2386 SM00525 TVNIR_2386 TVNIR_2390 SM00422 helix_turn_helix, mercury resistance TVNIR_2396 SM00487 DEAD-like helicases superfamily TVNIR_2396 SM00490 helicase superfamily c-terminal domain TVNIR_2402 SM00831 Cation transporter/ATPase, N-terminus TVNIR_2416 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVNIR_2416 SM00091 PAS domain TVNIR_2416 SM00387 Histidine kinase-like ATPases TVNIR_2416 SM00388 His Kinase A (phosphoacceptor) domain TVNIR_2416 SM00448 cheY-homologous receiver domain TVNIR_2417 SM00448 cheY-homologous receiver domain TVNIR_2417 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TVNIR_2418 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TVNIR_2421 SM00382 ATPases associated with a variety of cellular activities TVNIR_2424 SM01012 TVNIR_2424 TVNIR_2434 SM00382 ATPases associated with a variety of cellular activities TVNIR_2435 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_2435 SM00924 MgtE intracellular N domain TVNIR_2436 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_2436 SM00924 MgtE intracellular N domain TVNIR_2438 SM00422 helix_turn_helix, mercury resistance TVNIR_2458 SM00910 TVNIR_2458 TVNIR_2459 SM00877 TVNIR_2459 TVNIR_2463 SM00316 Ribosomal protein S1-like RNA-binding domain TVNIR_2463 SM00732 Likely ribonuclease with RNase H fold. TVNIR_2466 SM00052 Putative diguanylate phosphodiesterase TVNIR_2466 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVNIR_2466 SM00091 PAS domain TVNIR_2466 SM00267 diguanylate cyclase TVNIR_2478 SM00382 ATPases associated with a variety of cellular activities TVNIR_2479 SM00382 ATPases associated with a variety of cellular activities TVNIR_2481 SM00382 ATPases associated with a variety of cellular activities TVNIR_2481 SM01086 C-terminal, D2-small domain, of ClpB protein TVNIR_2485 SM00938 Nitrogen regulatory protein P-II TVNIR_2487 SM00881 CoA binding domain TVNIR_2490 SM00421 helix_turn_helix, Lux Regulon TVNIR_2490 SM00448 cheY-homologous receiver domain TVNIR_2491 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVNIR_2491 SM00091 PAS domain TVNIR_2491 SM00387 Histidine kinase-like ATPases TVNIR_2491 SM00388 His Kinase A (phosphoacceptor) domain TVNIR_2493 SM00052 Putative diguanylate phosphodiesterase TVNIR_2493 SM00267 diguanylate cyclase TVNIR_2493 SM00448 cheY-homologous receiver domain TVNIR_2503 SM00858 TVNIR_2503 TVNIR_2509 SM00382 ATPases associated with a variety of cellular activities TVNIR_2515 SM00387 Histidine kinase-like ATPases TVNIR_2515 SM00388 His Kinase A (phosphoacceptor) domain TVNIR_2516 SM00382 ATPases associated with a variety of cellular activities TVNIR_2516 SM00448 cheY-homologous receiver domain TVNIR_2531 SM00245 tail specific protease TVNIR_2537 SM00382 ATPases associated with a variety of cellular activities TVNIR_2538 SM00327 von Willebrand factor (vWF) type A domain TVNIR_2541 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_2541 SM01091 Transporter associated domain TVNIR_2544 SM00729 Elongator protein 3, MiaB family, Radical SAM TVNIR_2550 SM00662 RNA polymerases D TVNIR_2551 SM00363 S4 RNA-binding domain TVNIR_2551 SM01390 TVNIR_2551 TVNIR_2563 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TVNIR_2564 SM01374 TVNIR_2564 TVNIR_2568 SM00322 K homology RNA-binding domain TVNIR_2571 SM01382 TVNIR_2571 TVNIR_2571 SM01383 TVNIR_2571 TVNIR_2575 SM01403 TVNIR_2575 TVNIR_2577 SM00838 Elongation factor G C-terminus TVNIR_2577 SM00889 Elongation factor G, domain IV TVNIR_2580 SM00663 RNA polymerase I subunit A N-terminus TVNIR_2585 SM00649 Ribosomal protein L11/L12 TVNIR_2586 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TVNIR_2586 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TVNIR_2595 SM00957 SecA DEAD-like domain TVNIR_2595 SM00958 SecA preprotein cross-linking domain TVNIR_2598 SM00864 Tubulin/FtsZ family, GTPase domain TVNIR_2598 SM00865 Tubulin/FtsZ family, C-terminal domain TVNIR_2599 SM00842 Cell division protein FtsA TVNIR_2624 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TVNIR_2634 SM00382 ATPases associated with a variety of cellular activities TVNIR_2637 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_2641 SM00382 ATPases associated with a variety of cellular activities TVNIR_2651 SM00464 Found in ATP-dependent protease La (LON) TVNIR_2658 SM00382 ATPases associated with a variety of cellular activities TVNIR_2663 SM00342 helix_turn_helix, arabinose operon control protein TVNIR_2668 SM00479 TVNIR_2668 TVNIR_2673 SM01400 TVNIR_2673 TVNIR_2676 SM00028 Tetratricopeptide repeats TVNIR_2678 SM00937 TVNIR_2678 TVNIR_2683 SM00845 GatB domain TVNIR_2690 SM00341 Helicase and RNase D C-terminal TVNIR_2690 SM00474 3'-5' exonuclease TVNIR_2692 SM00731 SprT homologues. TVNIR_2713 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVNIR_2713 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVNIR_2713 SM00387 Histidine kinase-like ATPases TVNIR_2714 SM00421 helix_turn_helix, Lux Regulon TVNIR_2714 SM00448 cheY-homologous receiver domain TVNIR_2718 SM00671 Sel1-like repeats. TVNIR_2723 SM00479 TVNIR_2723 TVNIR_2726 SM00257 Lysin motif TVNIR_2736 SM00838 Elongation factor G C-terminus TVNIR_2736 SM00889 Elongation factor G, domain IV TVNIR_2752 SM00382 ATPases associated with a variety of cellular activities TVNIR_2752 SM00448 cheY-homologous receiver domain TVNIR_2753 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVNIR_2753 SM00387 Histidine kinase-like ATPases TVNIR_2753 SM00388 His Kinase A (phosphoacceptor) domain TVNIR_2756 SM00382 ATPases associated with a variety of cellular activities TVNIR_2758 SM00382 ATPases associated with a variety of cellular activities TVNIR_2766 SM00382 ATPases associated with a variety of cellular activities TVNIR_2769 SM00411 bacterial (prokaryotic) histone like domain TVNIR_2772 SM00382 ATPases associated with a variety of cellular activities TVNIR_2772 SM00464 Found in ATP-dependent protease La (LON) TVNIR_2773 SM00382 ATPases associated with a variety of cellular activities TVNIR_2773 SM00994 ClpX C4-type zinc finger TVNIR_2773 SM01086 C-terminal, D2-small domain, of ClpB protein TVNIR_2779 SM00853 MutL C terminal dimerisation domain TVNIR_2779 SM01340 TVNIR_2779 TVNIR_2780 SM00257 Lysin motif TVNIR_2780 SM00646 TVNIR_2780 TVNIR_2784 SM00387 Histidine kinase-like ATPases TVNIR_2784 SM00433 TopoisomeraseII TVNIR_2785 SM00028 Tetratricopeptide repeats TVNIR_2788 SM00244 prohibitin homologues TVNIR_2792 SM00852 Probable molybdopterin binding domain TVNIR_2794 SM00642 Alpha-amylase domain TVNIR_2798 SM00382 ATPases associated with a variety of cellular activities TVNIR_2818 SM00363 S4 RNA-binding domain TVNIR_2821 SM00849 Metallo-beta-lactamase superfamily TVNIR_2824 SM01350 TVNIR_2824 TVNIR_2829 SM00487 DEAD-like helicases superfamily TVNIR_2829 SM00490 helicase superfamily c-terminal domain TVNIR_2853 SM00382 ATPases associated with a variety of cellular activities TVNIR_2891 SM00382 ATPases associated with a variety of cellular activities TVNIR_2904 SM00382 ATPases associated with a variety of cellular activities TVNIR_2915 SM00881 CoA binding domain TVNIR_2927 SM00382 ATPases associated with a variety of cellular activities TVNIR_2929 SM00843 TVNIR_2929 TVNIR_2937 SM00481 DNA polymerase alpha chain like domain TVNIR_2950 SM00382 ATPases associated with a variety of cellular activities TVNIR_2956 SM00257 Lysin motif TVNIR_2960 SM00463 Small MutS-related domain TVNIR_2962 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVNIR_2965 SM00487 DEAD-like helicases superfamily TVNIR_2965 SM00491 TVNIR_2965 TVNIR_2972 SM00852 Probable molybdopterin binding domain TVNIR_2973 SM00849 Metallo-beta-lactamase superfamily TVNIR_2983 SM00877 TVNIR_2983 TVNIR_2984 SM00877 TVNIR_2984 TVNIR_2985 SM00877 TVNIR_2985 TVNIR_2991 SM00961 Ribulose bisphosphate carboxylase, small chain TVNIR_2996 SM00052 Putative diguanylate phosphodiesterase TVNIR_2996 SM00267 diguanylate cyclase TVNIR_2996 SM01079 TVNIR_2996 TVNIR_2998 SM00342 helix_turn_helix, arabinose operon control protein TVNIR_3000 SM01322 TVNIR_3000 TVNIR_3005 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain TVNIR_3031 SM00763 PrkA AAA domain TVNIR_3044 SM00450 Rhodanese Homology Domain TVNIR_3044 SM00849 Metallo-beta-lactamase superfamily TVNIR_3048 SM00992 Hemimethylated DNA-binding protein YccV like TVNIR_3052 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TVNIR_3052 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TVNIR_3055 SM00342 helix_turn_helix, arabinose operon control protein TVNIR_3060 SM00138 Methyltransferase, chemotaxis proteins TVNIR_3061 SM00854 Bacterial capsule synthesis protein PGA_cap TVNIR_3067 SM00342 helix_turn_helix, arabinose operon control protein TVNIR_3069 SM00450 Rhodanese Homology Domain TVNIR_3069 SM00849 Metallo-beta-lactamase superfamily TVNIR_3086 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_3086 SM01240 TVNIR_3086 TVNIR_3093 SM00091 PAS domain TVNIR_3093 SM00387 Histidine kinase-like ATPases TVNIR_3093 SM00388 His Kinase A (phosphoacceptor) domain TVNIR_3094 SM00382 ATPases associated with a variety of cellular activities TVNIR_3094 SM00448 cheY-homologous receiver domain TVNIR_3095 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_3098 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_3099 SM00479 TVNIR_3099 TVNIR_3106 SM00316 Ribosomal protein S1-like RNA-binding domain TVNIR_3106 SM00322 K homology RNA-binding domain TVNIR_3107 SM01387 TVNIR_3107 TVNIR_3111 SM00316 Ribosomal protein S1-like RNA-binding domain TVNIR_3111 SM00322 K homology RNA-binding domain TVNIR_3120 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TVNIR_3121 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TVNIR_3131 SM00382 ATPases associated with a variety of cellular activities TVNIR_3134 SM01103 TVNIR_3134 TVNIR_3135 SM00851 MGS-like domain TVNIR_3135 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TVNIR_3136 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain TVNIR_3141 SM00450 Rhodanese Homology Domain TVNIR_3146 SM00841 Elongation factor P, C-terminal TVNIR_3146 SM01185 TVNIR_3146 TVNIR_3149 SM00052 Putative diguanylate phosphodiesterase TVNIR_3149 SM00091 PAS domain TVNIR_3149 SM00267 diguanylate cyclase TVNIR_3150 SM00271 DnaJ molecular chaperone homology domain TVNIR_3165 SM00382 ATPases associated with a variety of cellular activities TVNIR_3169 SM00833 Cobalamin synthesis protein cobW C-terminal domain TVNIR_3173 SM00487 DEAD-like helicases superfamily TVNIR_3173 SM00490 helicase superfamily c-terminal domain TVNIR_3185 SM00052 Putative diguanylate phosphodiesterase TVNIR_3185 SM00091 PAS domain TVNIR_3185 SM00267 diguanylate cyclase TVNIR_3190 SM00382 ATPases associated with a variety of cellular activities TVNIR_3190 SM00448 cheY-homologous receiver domain TVNIR_3191 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVNIR_3191 SM00387 Histidine kinase-like ATPases TVNIR_3191 SM00388 His Kinase A (phosphoacceptor) domain TVNIR_3192 SM00849 Metallo-beta-lactamase superfamily TVNIR_3194 SM00434 DNA Topoisomerase IV TVNIR_3195 SM00155 Phospholipase D. Active site motifs. TVNIR_3199 SM00257 Lysin motif TVNIR_3210 SM00341 Helicase and RNase D C-terminal TVNIR_3210 SM00487 DEAD-like helicases superfamily TVNIR_3210 SM00490 helicase superfamily c-terminal domain TVNIR_3210 SM00956 TVNIR_3210 TVNIR_3211 SM00382 ATPases associated with a variety of cellular activities TVNIR_3212 SM00507 HNH nucleases TVNIR_3217 SM00671 Sel1-like repeats. TVNIR_3219 SM00986 Uracil DNA glycosylase superfamily TVNIR_3219 SM00987 UreE urease accessory protein, C-terminal domain TVNIR_3220 SM00917 LeuA allosteric (dimerisation) domain TVNIR_3251 SM00450 Rhodanese Homology Domain TVNIR_3255 SM01005 Alanine racemase, C-terminal domain TVNIR_3256 SM00382 ATPases associated with a variety of cellular activities TVNIR_3261 SM00967 RNA 2'-O ribose methyltransferase substrate binding TVNIR_3262 SM00316 Ribosomal protein S1-like RNA-binding domain TVNIR_3262 SM00357 Cold shock protein domain TVNIR_3262 SM00955 TVNIR_3262 TVNIR_3263 SM00788 Adenylosuccinate synthetase TVNIR_3266 SM00244 prohibitin homologues TVNIR_3267 SM00244 prohibitin homologues TVNIR_3268 SM00919 Malic enzyme, NAD binding domain TVNIR_3268 SM01274 TVNIR_3268 TVNIR_3281 SM00382 ATPases associated with a variety of cellular activities TVNIR_3285 SM00487 DEAD-like helicases superfamily TVNIR_3285 SM00490 helicase superfamily c-terminal domain TVNIR_3319 SM00487 DEAD-like helicases superfamily TVNIR_3319 SM00490 helicase superfamily c-terminal domain TVNIR_3343 SM00849 Metallo-beta-lactamase superfamily TVNIR_3344 SM00829 Enoylreductase TVNIR_3348 SM00829 Enoylreductase TVNIR_3350 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_3360 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_3367 SM00028 Tetratricopeptide repeats TVNIR_3374 SM00382 ATPases associated with a variety of cellular activities TVNIR_3375 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TVNIR_3382 SM00834 Putative regulatory protein TVNIR_3387 SM00155 Phospholipase D. Active site motifs. TVNIR_3408 SM00316 Ribosomal protein S1-like RNA-binding domain TVNIR_3416 SM00387 Histidine kinase-like ATPases TVNIR_3425 SM00382 ATPases associated with a variety of cellular activities TVNIR_3425 SM00962 SRP54-type protein, GTPase domain TVNIR_3425 SM00963 SRP54-type protein, helical bundle domain TVNIR_3427 SM01091 Transporter associated domain TVNIR_3428 SM00382 ATPases associated with a variety of cellular activities TVNIR_3435 SM00861 Transketolase, pyrimidine binding domain TVNIR_3436 SM00670 Large family of predicted nucleotide-binding domains TVNIR_3439 SM01130 TVNIR_3439 TVNIR_3442 SM00363 S4 RNA-binding domain TVNIR_3446 SM00859 Semialdehyde dehydrogenase, NAD binding domain TVNIR_3448 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVNIR_3467 SM00634 Bacterial Ig-like domain (group 1) TVNIR_3480 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TVNIR_3482 SM00382 ATPases associated with a variety of cellular activities TVNIR_3486 SM00855 Phosphoglycerate mutase family TVNIR_3495 SM00400 zinc finger TVNIR_3495 SM00493 TVNIR_3495 TVNIR_3495 SM00766 DNA primase DnaG DnaB-binding TVNIR_3505 SM00487 DEAD-like helicases superfamily TVNIR_3526 SM00382 ATPases associated with a variety of cellular activities TVNIR_3528 SM00947 Carbonic anhydrase TVNIR_3538 SM00966 SpoVT / AbrB like domain TVNIR_3542 SM00014 Acid phosphatase homologues TVNIR_3546 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. TVNIR_3547 SM00852 Probable molybdopterin binding domain TVNIR_3549 SM00507 HNH nucleases TVNIR_3550 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TVNIR_3550 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TVNIR_3553 SM00487 DEAD-like helicases superfamily TVNIR_3553 SM00490 helicase superfamily c-terminal domain TVNIR_3555 SM00836 DALR anticodon binding domain TVNIR_3555 SM01016 Arginyl tRNA synthetase N terminal dom TVNIR_3557 SM00382 ATPases associated with a variety of cellular activities TVNIR_3557 SM00487 DEAD-like helicases superfamily TVNIR_3557 SM00490 helicase superfamily c-terminal domain TVNIR_3557 SM00847 Helicase associated domain (HA2) Add an annotation TVNIR_3561 SM00062 Bacterial periplasmic substrate-binding proteins TVNIR_3564 SM00986 Uracil DNA glycosylase superfamily TVNIR_3564 SM00987 UreE urease accessory protein, C-terminal domain TVNIR_3568 SM00306 Hint (Hedgehog/Intein) domain N-terminal region TVNIR_3574 SM00052 Putative diguanylate phosphodiesterase TVNIR_3574 SM00091 PAS domain TVNIR_3574 SM00267 diguanylate cyclase TVNIR_3575 SM01007 Class II Aldolase and Adducin N-terminal domain TVNIR_3582 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TVNIR_3589 SM00478 endonuclease III TVNIR_3589 SM00525 TVNIR_3589 TVNIR_3595 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TVNIR_3596 SM00271 DnaJ molecular chaperone homology domain TVNIR_3602 SM00729 Elongator protein 3, MiaB family, Radical SAM TVNIR_3605 SM00357 Cold shock protein domain TVNIR_3605 SM00382 ATPases associated with a variety of cellular activities TVNIR_3605 SM00959 Rho termination factor, N-terminal domain TVNIR_3607 SM00487 DEAD-like helicases superfamily TVNIR_3607 SM00490 helicase superfamily c-terminal domain TVNIR_3615 SM00116 Domain in cystathionine beta-synthase and other proteins. TVNIR_3624 SM00729 Elongator protein 3, MiaB family, Radical SAM TVNIR_3627 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TVNIR_3635 SM00382 ATPases associated with a variety of cellular activities TVNIR_3637 SM00357 Cold shock protein domain TVNIR_3638 SM01230 TVNIR_3638 TVNIR_3643 SM00836 DALR anticodon binding domain TVNIR_3644 SM00563 Phosphate acyltransferases TVNIR_3650 SM00897 FIST N domain TVNIR_3650 SM01204 TVNIR_3650 TVNIR_3683 SM00327 von Willebrand factor (vWF) type A domain TVNIR_3693 SM00287 Bacterial SH3 domain homologues TVNIR_3694 SM00267 diguanylate cyclase TVNIR_3698 SM00072 Guanylate kinase homologues. TVNIR_3699 SM01409 TVNIR_3699 TVNIR_3700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TVNIR_3700 SM00954 Region found in RelA / SpoT proteins TVNIR_3702 SM00487 DEAD-like helicases superfamily TVNIR_3702 SM00490 helicase superfamily c-terminal domain TVNIR_3705 SM01228 TVNIR_3705 TVNIR_3708 SM00470 ParB-like nuclease domain TVNIR_3716 SM00382 ATPases associated with a variety of cellular activities TVNIR_3722 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TVNIR_3726 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TVNIR_3726 SM00245 tail specific protease TVNIR_3728 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TVNIR_3729 SM00450 Rhodanese Homology Domain TVNIR_3735 SM00382 ATPases associated with a variety of cellular activities TVNIR_3735 SM00448 cheY-homologous receiver domain TVNIR_3736 SM00387 Histidine kinase-like ATPases TVNIR_3736 SM00388 His Kinase A (phosphoacceptor) domain TVNIR_3740 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TVNIR_3740 SM00474 3'-5' exonuclease TVNIR_3740 SM00475 5'-3' exonuclease TVNIR_3740 SM00482 DNA polymerase A domain TVNIR_3754 SM00347 helix_turn_helix multiple antibiotic resistance protein TVNIR_3767 SM00487 DEAD-like helicases superfamily TVNIR_3767 SM00490 helicase superfamily c-terminal domain TVNIR_3784 SM00861 Transketolase, pyrimidine binding domain TVNIR_3808 SM01234 TVNIR_3808 TVNIR_3811 SM00382 ATPases associated with a variety of cellular activities TVNIR_3811 SM00760 Bacterial dnaA protein helix-turn-helix domain TVNIR_3812 SM00480 DNA polymerase III beta subunit TVNIR_3816 SM00387 Histidine kinase-like ATPases TVNIR_3816 SM00433 TopoisomeraseII TVNIR_3843 SM00382 ATPases associated with a variety of cellular activities TVNIR_3847 SM00421 helix_turn_helix, Lux Regulon TVNIR_3847 SM00448 cheY-homologous receiver domain TVNIR_3848 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor