THITH_00050	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
THITH_00050	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
THITH_00050	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
THITH_00050	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
THITH_00050	PWY-6978	plastoquinol-9 biosynthesis II
THITH_00065	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THITH_00065	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THITH_00070	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THITH_00070	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THITH_00075	PWY-4983	L-citrulline-nitric oxide cycle
THITH_00075	PWY-4984	urea cycle
THITH_00075	PWY-5	canavanine biosynthesis
THITH_00075	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THITH_00075	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THITH_00150	PWY-1042	glycolysis IV (plant cytosol)
THITH_00150	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THITH_00150	PWY-5484	glycolysis II (from fructose 6-phosphate)
THITH_00150	PWY-5723	Rubisco shunt
THITH_00150	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THITH_00150	PWY-6886	1-butanol autotrophic biosynthesis
THITH_00150	PWY-6901	superpathway of glucose and xylose degradation
THITH_00150	PWY-7003	glycerol degradation to butanol
THITH_00150	PWY-7124	ethylene biosynthesis V (engineered)
THITH_00150	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THITH_00175	PWY-3821	galactose degradation III
THITH_00175	PWY-6317	galactose degradation I (Leloir pathway)
THITH_00175	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
THITH_00175	PWY-6527	stachyose degradation
THITH_00175	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
THITH_00175	PWY-7344	UDP-D-galactose biosynthesis
THITH_00415	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
THITH_00415	PWY-7820	THITH_00415
THITH_00420	PWY-6749	CMP-legionaminate biosynthesis I
THITH_00425	PWY-5659	GDP-mannose biosynthesis
THITH_00425	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
THITH_00500	PWY-2941	L-lysine biosynthesis II
THITH_00500	PWY-2942	L-lysine biosynthesis III
THITH_00500	PWY-5097	L-lysine biosynthesis VI
THITH_00510	PWY-2941	L-lysine biosynthesis II
THITH_00510	PWY-5097	L-lysine biosynthesis VI
THITH_00540	PWY-5839	menaquinol-7 biosynthesis
THITH_00540	PWY-5844	menaquinol-9 biosynthesis
THITH_00540	PWY-5849	menaquinol-6 biosynthesis
THITH_00540	PWY-5890	menaquinol-10 biosynthesis
THITH_00540	PWY-5891	menaquinol-11 biosynthesis
THITH_00540	PWY-5892	menaquinol-12 biosynthesis
THITH_00540	PWY-5895	menaquinol-13 biosynthesis
THITH_00605	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THITH_00630	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THITH_00930	PWY-3341	L-proline biosynthesis III
THITH_00930	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
THITH_00950	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
THITH_00950	PWY-6167	flavin biosynthesis II (archaea)
THITH_00950	PWY-6168	flavin biosynthesis III (fungi)
THITH_00950	PWY-7863	THITH_00950
THITH_00960	PWY-7884	THITH_00960
THITH_00970	PWY-7560	methylerythritol phosphate pathway II
THITH_01185	PWY-6891	thiazole biosynthesis II (Bacillus)
THITH_01185	PWY-6892	thiazole biosynthesis I (E. coli)
THITH_01205	PWY-5723	Rubisco shunt
THITH_01270	PWY-381	nitrate reduction II (assimilatory)
THITH_01270	PWY-5675	nitrate reduction V (assimilatory)
THITH_01270	PWY-6549	L-glutamine biosynthesis III
THITH_01270	PWY-6963	ammonia assimilation cycle I
THITH_01270	PWY-6964	ammonia assimilation cycle II
THITH_01340	PWY-6823	molybdenum cofactor biosynthesis
THITH_01345	PWY-1042	glycolysis IV (plant cytosol)
THITH_01345	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THITH_01345	PWY-5484	glycolysis II (from fructose 6-phosphate)
THITH_01345	PWY-7385	1,3-propanediol biosynthesis (engineered)
THITH_01350	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THITH_01400	PWY-5278	sulfite oxidation III
THITH_01400	PWY-5340	sulfate activation for sulfonation
THITH_01400	PWY-6683	sulfate reduction III (assimilatory)
THITH_01400	PWY-6932	selenate reduction
THITH_01415	PWY-5278	sulfite oxidation III
THITH_01415	PWY-5279	sulfite oxidation II
THITH_01440	PWY-7980	THITH_01440
THITH_01490	PWY-6823	molybdenum cofactor biosynthesis
THITH_01490	PWY-7887	THITH_01490
THITH_01500	PWY-6823	molybdenum cofactor biosynthesis
THITH_01755	PWY-6749	CMP-legionaminate biosynthesis I
THITH_01770	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THITH_01770	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THITH_01770	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THITH_01770	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THITH_01770	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THITH_01770	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THITH_01770	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THITH_01770	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THITH_01810	PWY-5484	glycolysis II (from fructose 6-phosphate)
THITH_01810	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THITH_02070	PWY-6823	molybdenum cofactor biosynthesis
THITH_02080	PWY-5964	guanylyl molybdenum cofactor biosynthesis
THITH_02080	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
THITH_02085	PWY-6823	molybdenum cofactor biosynthesis
THITH_02315	PWY-5316	nicotine biosynthesis
THITH_02315	PWY-7342	superpathway of nicotine biosynthesis
THITH_02355	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
THITH_02395	PWY-6840	homoglutathione biosynthesis
THITH_02395	PWY-7255	ergothioneine biosynthesis I (bacteria)
THITH_02415	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
THITH_02425	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
THITH_02440	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
THITH_02440	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
THITH_02490	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
THITH_02510	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THITH_02515	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THITH_02515	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THITH_02515	PWY-6897	thiamin salvage II
THITH_02515	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
THITH_02515	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
THITH_02515	PWY-7356	thiamin salvage IV (yeast)
THITH_02515	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
THITH_02520	PWY-6910	hydroxymethylpyrimidine salvage
THITH_02520	PWY-7356	thiamin salvage IV (yeast)
THITH_02520	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
THITH_02540	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THITH_02540	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THITH_02550	PWY-7883	THITH_02550
THITH_02600	PWY-2941	L-lysine biosynthesis II
THITH_02600	PWY-2942	L-lysine biosynthesis III
THITH_02600	PWY-5097	L-lysine biosynthesis VI
THITH_02620	PWY-6891	thiazole biosynthesis II (Bacillus)
THITH_02620	PWY-6892	thiazole biosynthesis I (E. coli)
THITH_02620	PWY-7560	methylerythritol phosphate pathway II
THITH_02685	PWY-6829	tRNA methylation (yeast)
THITH_02685	PWY-7285	methylwyosine biosynthesis
THITH_02685	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
THITH_02780	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THITH_02780	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
THITH_02785	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THITH_02785	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THITH_02785	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THITH_02790	PWY-5269	cardiolipin biosynthesis II
THITH_02790	PWY-5668	cardiolipin biosynthesis I
THITH_02790	PWY-7817	THITH_02790
THITH_02805	PWY-7731	THITH_02805
THITH_02810	PWY-4202	arsenate detoxification I (glutaredoxin)
THITH_02810	PWY-4621	arsenate detoxification II (glutaredoxin)
THITH_02940	PWY-6703	preQ<sub>0</sub> biosynthesis
THITH_02945	PWY-6703	preQ<sub>0</sub> biosynthesis
THITH_03315	PWY-5941	glycogen degradation II (eukaryotic)
THITH_03315	PWY-6724	starch degradation II
THITH_03315	PWY-6737	starch degradation V
THITH_03315	PWY-7238	sucrose biosynthesis II
THITH_03520	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THITH_03565	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THITH_03620	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
THITH_03620	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
THITH_03625	PWY-5101	L-isoleucine biosynthesis II
THITH_03625	PWY-5103	L-isoleucine biosynthesis III
THITH_03625	PWY-5104	L-isoleucine biosynthesis IV
THITH_03625	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
THITH_03625	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
THITH_03625	PWY-6389	(<i>S</i>)-acetoin biosynthesis
THITH_03625	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THITH_03630	PWY-5101	L-isoleucine biosynthesis II
THITH_03630	PWY-5103	L-isoleucine biosynthesis III
THITH_03630	PWY-5104	L-isoleucine biosynthesis IV
THITH_03630	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
THITH_03630	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
THITH_03630	PWY-6389	(<i>S</i>)-acetoin biosynthesis
THITH_03630	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THITH_03635	PWY-5103	L-isoleucine biosynthesis III
THITH_03635	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THITH_03645	PWY-5669	phosphatidylethanolamine biosynthesis I
THITH_03650	PWY-6871	3-methylbutanol biosynthesis
THITH_03790	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THITH_03790	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THITH_03930	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
THITH_03930	PWY-2201	folate transformations I
THITH_03930	PWY-3841	folate transformations II
THITH_03930	PWY-5030	L-histidine degradation III
THITH_03930	PWY-5497	purine nucleobases degradation II (anaerobic)
THITH_03930	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
THITH_03930	PWY-7909	THITH_03930
THITH_04050	PWY-5194	siroheme biosynthesis
THITH_04050	PWY-5196	factor 430 biosynthesis
THITH_04050	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
THITH_04105	PWY-5663	tetrahydrobiopterin biosynthesis I
THITH_04105	PWY-5664	tetrahydrobiopterin biosynthesis II
THITH_04105	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THITH_04105	PWY-6703	preQ<sub>0</sub> biosynthesis
THITH_04105	PWY-6983	tetrahydrobiopterin biosynthesis III
THITH_04105	PWY-7442	drosopterin and aurodrosopterin biosynthesis
THITH_04105	PWY-7852	THITH_04105
THITH_04285	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
THITH_04285	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
THITH_04285	PWY-6148	tetrahydromethanopterin biosynthesis
THITH_04285	PWY-7742	THITH_04285
THITH_04285	PWY-7745	THITH_04285
THITH_04285	PWY-7929	THITH_04285
THITH_04285	PWY-7934	THITH_04285
THITH_04285	PWY-7935	THITH_04285
THITH_04395	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
THITH_04415	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THITH_04415	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THITH_04415	PWY-5989	stearate biosynthesis II (bacteria and plants)
THITH_04415	PWY-5994	palmitate biosynthesis I (animals and fungi)
THITH_04415	PWY-6113	superpathway of mycolate biosynthesis
THITH_04415	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THITH_04415	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THITH_04415	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THITH_04415	PWY-7663	gondoate biosynthesis (anaerobic)
THITH_04415	PWY-7664	oleate biosynthesis IV (anaerobic)
THITH_04415	PWY-7858	THITH_04415
THITH_04415	PWYG-321	mycolate biosynthesis
THITH_04520	PWY-5316	nicotine biosynthesis
THITH_04520	PWY-5381	pyridine nucleotide cycling (plants)
THITH_04520	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THITH_04520	PWY-7342	superpathway of nicotine biosynthesis
THITH_04530	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THITH_04530	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THITH_04530	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THITH_04530	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THITH_04530	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THITH_04530	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THITH_04530	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THITH_04530	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THITH_04535	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THITH_04535	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THITH_04535	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THITH_04535	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THITH_04535	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THITH_04535	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THITH_04535	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THITH_04535	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THITH_04805	PWY-5381	pyridine nucleotide cycling (plants)
THITH_04805	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THITH_04805	PWY-6596	adenosine nucleotides degradation I
THITH_04805	PWY-6606	guanosine nucleotides degradation II
THITH_04805	PWY-6607	guanosine nucleotides degradation I
THITH_04805	PWY-6608	guanosine nucleotides degradation III
THITH_04805	PWY-7185	UTP and CTP dephosphorylation I
THITH_04805	PWY-7821	THITH_04805
THITH_04930	PWY-7801	THITH_04930
THITH_05015	PWY-5392	reductive TCA cycle II
THITH_05015	PWY-5537	pyruvate fermentation to acetate V
THITH_05015	PWY-5538	pyruvate fermentation to acetate VI
THITH_05015	PWY-5690	TCA cycle II (plants and fungi)
THITH_05015	PWY-5913	TCA cycle VI (obligate autotrophs)
THITH_05015	PWY-6728	methylaspartate cycle
THITH_05015	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THITH_05015	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THITH_05075	PWY-6832	2-aminoethylphosphonate degradation II
THITH_05105	PWY-1622	formaldehyde assimilation I (serine pathway)
THITH_05105	PWY-181	photorespiration
THITH_05105	PWY-2161	folate polyglutamylation
THITH_05105	PWY-2201	folate transformations I
THITH_05105	PWY-3661	glycine betaine degradation I
THITH_05105	PWY-3661-1	glycine betaine degradation II (mammalian)
THITH_05105	PWY-3841	folate transformations II
THITH_05105	PWY-5497	purine nucleobases degradation II (anaerobic)
THITH_05115	PWY-7991	THITH_05115
THITH_05120	PWY-6167	flavin biosynthesis II (archaea)
THITH_05120	PWY-6168	flavin biosynthesis III (fungi)
THITH_05120	PWY-7980	THITH_05120
THITH_05125	PWY-6167	flavin biosynthesis II (archaea)
THITH_05125	PWY-6168	flavin biosynthesis III (fungi)
THITH_05125	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THITH_05125	PWY-7991	THITH_05125
THITH_05400	PWY-6683	sulfate reduction III (assimilatory)
THITH_05430	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
THITH_05435	PWY-7255	ergothioneine biosynthesis I (bacteria)
THITH_05435	PWY-7550	ergothioneine biosynthesis II (fungi)
THITH_05440	PWY-7255	ergothioneine biosynthesis I (bacteria)
THITH_05570	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THITH_05570	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THITH_05570	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THITH_06070	PWY-6700	queuosine biosynthesis
THITH_06075	PWY-6700	queuosine biosynthesis
THITH_06095	PWY-2301	<i>myo</i>-inositol biosynthesis
THITH_06095	PWY-4702	phytate degradation I
THITH_06095	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
THITH_06110	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THITH_06130	PWY-7255	ergothioneine biosynthesis I (bacteria)
THITH_06135	PWY-5481	pyruvate fermentation to lactate
THITH_06135	PWY-6901	superpathway of glucose and xylose degradation
THITH_06140	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THITH_06140	PWY-7118	chitin degradation to ethanol
THITH_06140	PWY-7294	xylose degradation IV
THITH_06140	PWY-7295	L-arabinose degradation IV
THITH_06140	PWY-7854	THITH_06140
THITH_06275	PWY-2722	trehalose degradation IV
THITH_06275	PWY-2723	trehalose degradation V
THITH_06275	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THITH_06275	PWY-5661	GDP-glucose biosynthesis
THITH_06275	PWY-621	sucrose degradation III (sucrose invertase)
THITH_06275	PWY-7238	sucrose biosynthesis II
THITH_06275	PWY-7385	1,3-propanediol biosynthesis (engineered)
THITH_06300	PWY-7805	THITH_06300
THITH_06300	PWY-7807	THITH_06300
THITH_06305	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THITH_06305	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THITH_06310	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THITH_06310	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
THITH_06310	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THITH_06310	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THITH_06325	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THITH_06325	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THITH_06340	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
THITH_06340	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
THITH_06345	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
THITH_06345	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
THITH_06415	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THITH_06445	PWY-3781	aerobic respiration I (cytochrome c)
THITH_06445	PWY-4521	arsenite oxidation I (respiratory)
THITH_06445	PWY-6692	Fe(II) oxidation
THITH_06445	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THITH_06565	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
THITH_06705	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
THITH_06705	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
THITH_06710	PWY-3961	phosphopantothenate biosynthesis II
THITH_06740	PWY-5839	menaquinol-7 biosynthesis
THITH_06740	PWY-5851	demethylmenaquinol-9 biosynthesis
THITH_06740	PWY-5852	demethylmenaquinol-8 biosynthesis I
THITH_06740	PWY-5853	demethylmenaquinol-6 biosynthesis I
THITH_06740	PWY-5890	menaquinol-10 biosynthesis
THITH_06740	PWY-5891	menaquinol-11 biosynthesis
THITH_06740	PWY-5892	menaquinol-12 biosynthesis
THITH_06740	PWY-5895	menaquinol-13 biosynthesis
THITH_06970	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THITH_06995	PWY-7805	THITH_06995
THITH_06995	PWY-7807	THITH_06995
THITH_07010	PWY-1361	benzoyl-CoA degradation I (aerobic)
THITH_07010	PWY-5109	2-methylbutanoate biosynthesis
THITH_07010	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
THITH_07010	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
THITH_07010	PWY-5177	glutaryl-CoA degradation
THITH_07010	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THITH_07010	PWY-6435	4-hydroxybenzoate biosynthesis V
THITH_07010	PWY-6583	pyruvate fermentation to butanol I
THITH_07010	PWY-6863	pyruvate fermentation to hexanol
THITH_07010	PWY-6883	pyruvate fermentation to butanol II
THITH_07010	PWY-6944	androstenedione degradation
THITH_07010	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
THITH_07010	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
THITH_07010	PWY-7007	methyl ketone biosynthesis
THITH_07010	PWY-7046	4-coumarate degradation (anaerobic)
THITH_07010	PWY-7094	fatty acid salvage
THITH_07010	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
THITH_07010	PWY-735	jasmonic acid biosynthesis
THITH_07010	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
THITH_07010	PWY-7606	docosahexaenoate biosynthesis III (mammals)
THITH_07010	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
THITH_07010	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
THITH_07010	PWY-7726	THITH_07010
THITH_07010	PWY-7778	THITH_07010
THITH_07010	PWY-7779	THITH_07010
THITH_07020	PWY-7094	fatty acid salvage
THITH_07020	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
THITH_07065	PWY-4381	fatty acid biosynthesis initiation I
THITH_07065	PWY-5743	3-hydroxypropanoate cycle
THITH_07065	PWY-5744	glyoxylate assimilation
THITH_07065	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THITH_07065	PWY-6722	candicidin biosynthesis
THITH_07075	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
THITH_07075	PWY-7177	UTP and CTP dephosphorylation II
THITH_07075	PWY-7185	UTP and CTP dephosphorylation I
THITH_07080	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THITH_07080	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THITH_07085	PWY-1042	glycolysis IV (plant cytosol)
THITH_07085	PWY-1622	formaldehyde assimilation I (serine pathway)
THITH_07085	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THITH_07085	PWY-5484	glycolysis II (from fructose 6-phosphate)
THITH_07085	PWY-5723	Rubisco shunt
THITH_07085	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THITH_07085	PWY-6886	1-butanol autotrophic biosynthesis
THITH_07085	PWY-6901	superpathway of glucose and xylose degradation
THITH_07085	PWY-7003	glycerol degradation to butanol
THITH_07085	PWY-7124	ethylene biosynthesis V (engineered)
THITH_07085	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THITH_07095	PWY-7560	methylerythritol phosphate pathway II
THITH_07110	PWY-7560	methylerythritol phosphate pathway II
THITH_07325	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THITH_07325	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
THITH_07335	PWY-5340	sulfate activation for sulfonation
THITH_07425	PWY-4041	&gamma;-glutamyl cycle
THITH_07425	PWY-4061	glutathione-mediated detoxification I
THITH_07425	PWY-5826	hypoglycin biosynthesis
THITH_07425	PWY-6842	glutathione-mediated detoxification II
THITH_07425	PWY-7112	4-hydroxy-2-nonenal detoxification
THITH_07425	PWY-7559	glutathione degradation (DUG pathway - yeast)
THITH_07430	PWY-6168	flavin biosynthesis III (fungi)
THITH_07430	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THITH_07430	PWY-7991	THITH_07430
THITH_07475	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
THITH_07475	PWY-6853	ethylene biosynthesis II (microbes)
THITH_07475	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
THITH_07515	PWY-5674	nitrate reduction IV (dissimilatory)
THITH_07535	PWY-4261	glycerol degradation I
THITH_07605	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THITH_07685	PWY-4381	fatty acid biosynthesis initiation I
THITH_07705	PWY-5269	cardiolipin biosynthesis II
THITH_07705	PWY-5668	cardiolipin biosynthesis I
THITH_07705	PWY-7817	THITH_07705
THITH_07740	PWY-5482	pyruvate fermentation to acetate II
THITH_07740	PWY-5485	pyruvate fermentation to acetate IV
THITH_07740	PWY-5497	purine nucleobases degradation II (anaerobic)
THITH_07745	PWY-1281	sulfoacetaldehyde degradation I
THITH_07745	PWY-5482	pyruvate fermentation to acetate II
THITH_07745	PWY-5485	pyruvate fermentation to acetate IV
THITH_07745	PWY-5497	purine nucleobases degradation II (anaerobic)
THITH_07745	PWY-6637	sulfolactate degradation II
THITH_07750	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THITH_07750	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THITH_07750	PWY-5989	stearate biosynthesis II (bacteria and plants)
THITH_07750	PWY-6113	superpathway of mycolate biosynthesis
THITH_07750	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THITH_07750	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THITH_07750	PWY-7663	gondoate biosynthesis (anaerobic)
THITH_07750	PWY-7664	oleate biosynthesis IV (anaerobic)
THITH_07750	PWY-7858	THITH_07750
THITH_07750	PWYG-321	mycolate biosynthesis
THITH_07810	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
THITH_07835	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THITH_07835	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THITH_07835	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THITH_07895	PWY-43	putrescine biosynthesis II
THITH_07925	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
THITH_07925	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
THITH_07945	PWY-3461	L-tyrosine biosynthesis II
THITH_07945	PWY-3462	L-phenylalanine biosynthesis II
THITH_07945	PWY-6120	L-tyrosine biosynthesis III
THITH_07945	PWY-6627	salinosporamide A biosynthesis
THITH_07945	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
THITH_07945	PWY-7626	bacilysin biosynthesis
THITH_07955	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
THITH_07960	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THITH_07965	PWY-7205	CMP phosphorylation
THITH_07985	PWY-5686	UMP biosynthesis
THITH_07985	PWY-7790	THITH_07985
THITH_07985	PWY-7791	THITH_07985
THITH_07995	PWY-3801	sucrose degradation II (sucrose synthase)
THITH_07995	PWY-6527	stachyose degradation
THITH_07995	PWY-7238	sucrose biosynthesis II
THITH_07995	PWY-7343	UDP-glucose biosynthesis
THITH_07995	PWY-7817	THITH_07995
THITH_08005	PWY-6167	flavin biosynthesis II (archaea)
THITH_08195	PWY-6748	nitrate reduction VII (denitrification)
THITH_08200	PWY-6748	nitrate reduction VII (denitrification)
THITH_08375	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
THITH_08380	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
THITH_08385	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
THITH_08390	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
THITH_08390	PWY-5901	2,3-dihydroxybenzoate biosynthesis
THITH_08390	PWY-6406	salicylate biosynthesis I
THITH_08410	PWY-3781	aerobic respiration I (cytochrome c)
THITH_08410	PWY-4521	arsenite oxidation I (respiratory)
THITH_08410	PWY-6692	Fe(II) oxidation
THITH_08410	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THITH_08425	PWY-6748	nitrate reduction VII (denitrification)
THITH_08425	PWY-7084	nitrifier denitrification
THITH_08465	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THITH_08465	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
THITH_08465	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THITH_08465	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THITH_08490	PWY-6840	homoglutathione biosynthesis
THITH_08490	PWY-7255	ergothioneine biosynthesis I (bacteria)
THITH_08495	PWY-6840	homoglutathione biosynthesis
THITH_08495	PWY-7255	ergothioneine biosynthesis I (bacteria)
THITH_08620	PWY-6902	chitin degradation II
THITH_08620	PWY-7822	THITH_08620
THITH_08620	PWY-7883	THITH_08620
THITH_08715	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THITH_08715	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THITH_08715	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THITH_08715	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
THITH_08715	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THITH_08715	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THITH_08730	PWY-5958	acridone alkaloid biosynthesis
THITH_08730	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THITH_08730	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THITH_08745	PWY-5367	petroselinate biosynthesis
THITH_08745	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THITH_08745	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THITH_08745	PWY-5989	stearate biosynthesis II (bacteria and plants)
THITH_08745	PWY-5994	palmitate biosynthesis I (animals and fungi)
THITH_08745	PWY-6113	superpathway of mycolate biosynthesis
THITH_08745	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THITH_08745	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THITH_08745	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THITH_08745	PWY-7663	gondoate biosynthesis (anaerobic)
THITH_08745	PWY-7664	oleate biosynthesis IV (anaerobic)
THITH_08745	PWY-7858	THITH_08745
THITH_08745	PWYG-321	mycolate biosynthesis
THITH_08750	PWY-4381	fatty acid biosynthesis initiation I
THITH_08750	PWY-6799	fatty acid biosynthesis (plant mitochondria)
THITH_08750	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THITH_08770	PWY-5913	TCA cycle VI (obligate autotrophs)
THITH_08770	PWY-6549	L-glutamine biosynthesis III
THITH_08770	PWY-6728	methylaspartate cycle
THITH_08770	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THITH_08770	PWY-7124	ethylene biosynthesis V (engineered)
THITH_08770	PWY-7254	TCA cycle VII (acetate-producers)
THITH_08770	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THITH_08780	PWY-7887	THITH_08780
THITH_08780	PWY-7892	THITH_08780
THITH_08810	PWY-5392	reductive TCA cycle II
THITH_08810	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THITH_08810	PWY-5690	TCA cycle II (plants and fungi)
THITH_08810	PWY-5913	TCA cycle VI (obligate autotrophs)
THITH_08810	PWY-6728	methylaspartate cycle
THITH_08810	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THITH_08810	PWY-7254	TCA cycle VII (acetate-producers)
THITH_08810	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THITH_08815	PWY-6123	inosine-5'-phosphate biosynthesis I
THITH_08815	PWY-6124	inosine-5'-phosphate biosynthesis II
THITH_08815	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THITH_08815	PWY-7234	inosine-5'-phosphate biosynthesis III
THITH_08985	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
THITH_09045	PWY-7892	THITH_09045
THITH_09060	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
THITH_09060	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
THITH_09090	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
THITH_09090	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
THITH_09090	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
THITH_09090	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
THITH_09090	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
THITH_09090	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
THITH_09090	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
THITH_09090	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
THITH_09090	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
THITH_09090	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
THITH_09095	PWY-181	photorespiration
THITH_09105	PWY-7072	hopanoid biosynthesis (bacteria)
THITH_09115	PWY-7072	hopanoid biosynthesis (bacteria)
THITH_09155	PWY-5686	UMP biosynthesis
THITH_09170	PWY-5484	glycolysis II (from fructose 6-phosphate)
THITH_09375	PWY-2941	L-lysine biosynthesis II
THITH_09375	PWY-2942	L-lysine biosynthesis III
THITH_09375	PWY-5097	L-lysine biosynthesis VI
THITH_09375	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
THITH_09375	PWY-6559	spermidine biosynthesis II
THITH_09375	PWY-6562	norspermidine biosynthesis
THITH_09375	PWY-7153	grixazone biosynthesis
THITH_09375	PWY-7977	THITH_09375
THITH_09415	PWY-6749	CMP-legionaminate biosynthesis I
THITH_09430	PWY-3781	aerobic respiration I (cytochrome c)
THITH_09430	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THITH_09430	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THITH_09430	PWY-5690	TCA cycle II (plants and fungi)
THITH_09430	PWY-6728	methylaspartate cycle
THITH_09430	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THITH_09430	PWY-7254	TCA cycle VII (acetate-producers)
THITH_09430	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THITH_09435	PWY-3781	aerobic respiration I (cytochrome c)
THITH_09435	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THITH_09435	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THITH_09435	PWY-5690	TCA cycle II (plants and fungi)
THITH_09435	PWY-6728	methylaspartate cycle
THITH_09435	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THITH_09435	PWY-7254	TCA cycle VII (acetate-producers)
THITH_09435	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THITH_09505	PWY-6012	acyl carrier protein metabolism I
THITH_09505	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
THITH_09505	PWY-6289	petrobactin biosynthesis
THITH_09595	PWY-6700	queuosine biosynthesis
THITH_09600	PWY-4261	glycerol degradation I
THITH_09610	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
THITH_09610	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
THITH_09610	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
THITH_09610	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
THITH_09610	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
THITH_09610	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
THITH_09610	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
THITH_09610	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
THITH_09610	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
THITH_09610	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
THITH_09620	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THITH_09620	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
THITH_09620	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THITH_09620	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THITH_09900	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
THITH_09900	PWY-5739	GDP-D-perosamine biosynthesis
THITH_09900	PWY-5740	GDP-L-colitose biosynthesis
THITH_09900	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
THITH_09900	PWY-7573	GDP-mycosamine biosynthesis
THITH_09980	PWY-6854	ethylene biosynthesis III (microbes)
THITH_09990	PWY-4981	L-proline biosynthesis II (from arginine)
THITH_09990	PWY-4984	urea cycle
THITH_09990	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THITH_10055	PWY-5941	glycogen degradation II (eukaryotic)
THITH_10055	PWY-6724	starch degradation II
THITH_10055	PWY-6737	starch degradation V
THITH_10055	PWY-7238	sucrose biosynthesis II
THITH_10065	PWY-622	starch biosynthesis
THITH_10065	PWY-7902	THITH_10065
THITH_10070	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
THITH_10070	PWY-622	starch biosynthesis
THITH_10070	PWY-7900	THITH_10070
THITH_10095	PWY-6655	xanthan biosynthesis
THITH_10095	PWY-6658	acetan biosynthesis
THITH_10125	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THITH_10125	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THITH_10125	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THITH_10145	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
THITH_10215	PWY-3221	dTDP-L-rhamnose biosynthesis II
THITH_10215	PWY-6808	dTDP-D-forosamine biosynthesis
THITH_10215	PWY-6942	dTDP-D-desosamine biosynthesis
THITH_10215	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
THITH_10215	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
THITH_10215	PWY-6974	dTDP-L-olivose biosynthesis
THITH_10215	PWY-6976	dTDP-L-mycarose biosynthesis
THITH_10215	PWY-7104	dTDP-L-megosamine biosynthesis
THITH_10215	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
THITH_10215	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
THITH_10215	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
THITH_10215	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
THITH_10215	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
THITH_10215	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
THITH_10215	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
THITH_10215	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
THITH_10215	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
THITH_10215	PWY-7688	THITH_10215
THITH_10215	PWY-7814	THITH_10215
THITH_10220	PWY-3221	dTDP-L-rhamnose biosynthesis II
THITH_10220	PWY-6808	dTDP-D-forosamine biosynthesis
THITH_10220	PWY-6942	dTDP-D-desosamine biosynthesis
THITH_10220	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
THITH_10220	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
THITH_10220	PWY-6974	dTDP-L-olivose biosynthesis
THITH_10220	PWY-6976	dTDP-L-mycarose biosynthesis
THITH_10220	PWY-7104	dTDP-L-megosamine biosynthesis
THITH_10220	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
THITH_10220	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
THITH_10220	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
THITH_10220	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
THITH_10220	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
THITH_10220	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
THITH_10220	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
THITH_10220	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
THITH_10220	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
THITH_10220	PWY-7688	THITH_10220
THITH_10220	PWY-7814	THITH_10220
THITH_10390	PWY-5941	glycogen degradation II (eukaryotic)
THITH_10390	PWY-6731	starch degradation III
THITH_10390	PWY-6737	starch degradation V
THITH_10390	PWY-7238	sucrose biosynthesis II
THITH_10405	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THITH_10405	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THITH_10405	PWY-5989	stearate biosynthesis II (bacteria and plants)
THITH_10405	PWY-5994	palmitate biosynthesis I (animals and fungi)
THITH_10405	PWY-6113	superpathway of mycolate biosynthesis
THITH_10405	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THITH_10405	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THITH_10405	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THITH_10405	PWY-7663	gondoate biosynthesis (anaerobic)
THITH_10405	PWY-7664	oleate biosynthesis IV (anaerobic)
THITH_10405	PWY-7858	THITH_10405
THITH_10405	PWYG-321	mycolate biosynthesis
THITH_10430	PWY-7560	methylerythritol phosphate pathway II
THITH_10435	PWY-5667	CDP-diacylglycerol biosynthesis I
THITH_10435	PWY-5981	CDP-diacylglycerol biosynthesis III
THITH_10435	PWY-7817	THITH_10435
THITH_10465	PWY-7799	THITH_10465
THITH_10465	PWY-7800	THITH_10465
THITH_10555	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
THITH_10555	PWY-5743	3-hydroxypropanoate cycle
THITH_10555	PWY-5744	glyoxylate assimilation
THITH_10555	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THITH_10555	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THITH_10555	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THITH_10555	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THITH_10595	PWY-3781	aerobic respiration I (cytochrome c)
THITH_10595	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THITH_10595	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THITH_10595	PWY-5690	TCA cycle II (plants and fungi)
THITH_10595	PWY-6728	methylaspartate cycle
THITH_10595	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THITH_10595	PWY-7254	TCA cycle VII (acetate-producers)
THITH_10595	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THITH_10640	PWY-2201	folate transformations I
THITH_10640	PWY-5497	purine nucleobases degradation II (anaerobic)
THITH_10640	PWY-7909	THITH_10640
THITH_10670	PWY-5676	acetyl-CoA fermentation to butanoate II
THITH_10670	PWY-5741	ethylmalonyl-CoA pathway
THITH_10670	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
THITH_10670	PWY-7948	THITH_10670
THITH_10730	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THITH_10730	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THITH_10730	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THITH_10730	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
THITH_10745	PWY-2161	folate polyglutamylation
THITH_10750	PWY-4381	fatty acid biosynthesis initiation I
THITH_10750	PWY-5743	3-hydroxypropanoate cycle
THITH_10750	PWY-5744	glyoxylate assimilation
THITH_10750	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THITH_10750	PWY-6722	candicidin biosynthesis
THITH_10785	PWY-2941	L-lysine biosynthesis II
THITH_10785	PWY-2942	L-lysine biosynthesis III
THITH_10785	PWY-5097	L-lysine biosynthesis VI
THITH_10785	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THITH_10785	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
THITH_10785	PWY-6559	spermidine biosynthesis II
THITH_10785	PWY-6562	norspermidine biosynthesis
THITH_10785	PWY-7153	grixazone biosynthesis
THITH_10785	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THITH_10785	PWY-7977	THITH_10785
THITH_10790	PWY-7396	butanol and isobutanol biosynthesis (engineered)
THITH_10805	PWY-6871	3-methylbutanol biosynthesis
THITH_10875	PWY-622	starch biosynthesis
THITH_10875	PWY-7902	THITH_10875
THITH_10960	PWY-5302	sulfur disproportionation II (aerobic)
THITH_10970	PWY-5686	UMP biosynthesis
THITH_10970	PWY-7790	THITH_10970
THITH_10970	PWY-7791	THITH_10970
THITH_11220	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
THITH_11265	PWY-2661	trehalose biosynthesis V
THITH_11270	PWY-2661	trehalose biosynthesis V
THITH_11360	PWY-3841	folate transformations II
THITH_11360	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THITH_11360	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THITH_11360	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THITH_11360	PWY-7199	pyrimidine deoxyribonucleosides salvage
THITH_11360	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THITH_11365	PWY-3841	folate transformations II
THITH_11365	PWY-6614	tetrahydrofolate biosynthesis
THITH_11390	PWY-7039	phosphatidate metabolism, as a signaling molecule
THITH_11390	PWY-7817	THITH_11390
THITH_11425	PWY-7799	THITH_11425
THITH_11425	PWY-7800	THITH_11425
THITH_11520	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THITH_11520	PWY-5723	Rubisco shunt
THITH_11570	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
THITH_11615	PWY-5269	cardiolipin biosynthesis II
THITH_11615	PWY-5668	cardiolipin biosynthesis I
THITH_11615	PWY-7817	THITH_11615
THITH_11620	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THITH_11620	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THITH_11620	PWY-6896	thiamin salvage I
THITH_11620	PWY-6897	thiamin salvage II
THITH_11630	PWY-6167	flavin biosynthesis II (archaea)
THITH_11630	PWY-6168	flavin biosynthesis III (fungi)
THITH_11645	PWY-1042	glycolysis IV (plant cytosol)
THITH_11645	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THITH_11645	PWY-5484	glycolysis II (from fructose 6-phosphate)
THITH_11645	PWY-5723	Rubisco shunt
THITH_11645	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THITH_11645	PWY-6886	1-butanol autotrophic biosynthesis
THITH_11645	PWY-6901	superpathway of glucose and xylose degradation
THITH_11645	PWY-7003	glycerol degradation to butanol
THITH_11645	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THITH_11645	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THITH_11745	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
THITH_11925	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THITH_11925	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
THITH_11925	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THITH_11925	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THITH_11925	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
THITH_11925	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THITH_11925	PWY-7205	CMP phosphorylation
THITH_11925	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THITH_11925	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THITH_11925	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THITH_11925	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THITH_11925	PWY-7224	purine deoxyribonucleosides salvage
THITH_11925	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THITH_11925	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THITH_11935	PWY-6936	seleno-amino acid biosynthesis
THITH_11935	PWY-7274	D-cycloserine biosynthesis
THITH_11935	PWY-7870	THITH_11935
THITH_11980	PWY-6683	sulfate reduction III (assimilatory)
THITH_11985	PWY-5306	superpathway of thiosulfate metabolism (<i>Desulfovibrio sulfodismutans</i>)
THITH_11985	PWY-5360	superpathway of tetrathionate reduction (<i>Salmonella typhimurium</i>)
THITH_11985	PWY-6683	sulfate reduction III (assimilatory)
THITH_12065	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THITH_12110	PWY-6936	seleno-amino acid biosynthesis
THITH_12115	PWY-6012	acyl carrier protein metabolism I
THITH_12115	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
THITH_12115	PWY-6289	petrobactin biosynthesis
THITH_12185	PWY-5316	nicotine biosynthesis
THITH_12185	PWY-7342	superpathway of nicotine biosynthesis
THITH_12200	PWY-7158	L-phenylalanine degradation V
THITH_12265	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THITH_12265	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
THITH_12265	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THITH_12265	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THITH_12320	PWY-7158	L-phenylalanine degradation V
THITH_12365	PWY-5532	adenosine nucleotides degradation IV
THITH_12365	PWY-5723	Rubisco shunt
THITH_12370	PWY-5532	adenosine nucleotides degradation IV
THITH_12370	PWY-5723	Rubisco shunt
THITH_12430	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THITH_12430	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
THITH_12430	PWY-6936	seleno-amino acid biosynthesis
THITH_12430	PWY-702	L-methionine biosynthesis II
THITH_12770	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
THITH_12790	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THITH_12795	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THITH_12795	PWY-6596	adenosine nucleotides degradation I
THITH_12795	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THITH_12860	PWY-5108	L-isoleucine biosynthesis V
THITH_12860	PWY-5132	humulone biosynthesis
THITH_12860	PWY-5133	cohumulone biosynthesis
THITH_12860	PWY-6672	<i>cis</i>-genanyl-CoA degradation
THITH_12860	PWY-7118	chitin degradation to ethanol
THITH_12860	PWY-7857	THITH_12860
THITH_12930	PWY-3781	aerobic respiration I (cytochrome c)
THITH_12930	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THITH_12930	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
THITH_12930	PWY-6692	Fe(II) oxidation
THITH_13005	PWY-1042	glycolysis IV (plant cytosol)
THITH_13005	PWY-5484	glycolysis II (from fructose 6-phosphate)
THITH_13005	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THITH_13005	PWY-7003	glycerol degradation to butanol
THITH_13010	PWY-6749	CMP-legionaminate biosynthesis I
THITH_13015	PWY-6614	tetrahydrofolate biosynthesis
THITH_13040	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THITH_13040	PWY-5686	UMP biosynthesis
THITH_13040	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THITH_13040	PWY-7790	THITH_13040
THITH_13040	PWY-7791	THITH_13040
THITH_13045	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THITH_13045	PWY-5686	UMP biosynthesis
THITH_13045	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THITH_13045	PWY-7790	THITH_13045
THITH_13045	PWY-7791	THITH_13045
THITH_13055	PWY-2941	L-lysine biosynthesis II
THITH_13055	PWY-2942	L-lysine biosynthesis III
THITH_13055	PWY-5097	L-lysine biosynthesis VI
THITH_13070	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THITH_13090	PWY-5669	phosphatidylethanolamine biosynthesis I
THITH_13140	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
THITH_13140	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THITH_13140	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
THITH_13205	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THITH_13205	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THITH_13205	PWY-5989	stearate biosynthesis II (bacteria and plants)
THITH_13205	PWY-6113	superpathway of mycolate biosynthesis
THITH_13205	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THITH_13205	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THITH_13205	PWY-7663	gondoate biosynthesis (anaerobic)
THITH_13205	PWY-7664	oleate biosynthesis IV (anaerobic)
THITH_13205	PWY-7858	THITH_13205
THITH_13205	PWYG-321	mycolate biosynthesis
THITH_13285	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
THITH_13460	PWY-2781	<i>cis</i>-zeatin biosynthesis
THITH_13480	PWY-6938	NADH repair
THITH_13485	PWY-6700	queuosine biosynthesis
THITH_13525	PWY-6823	molybdenum cofactor biosynthesis
THITH_13600	PWY-3801	sucrose degradation II (sucrose synthase)
THITH_13600	PWY-5054	sorbitol biosynthesis I
THITH_13600	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
THITH_13600	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THITH_13600	PWY-5659	GDP-mannose biosynthesis
THITH_13600	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THITH_13600	PWY-621	sucrose degradation III (sucrose invertase)
THITH_13600	PWY-622	starch biosynthesis
THITH_13600	PWY-6981	chitin biosynthesis
THITH_13600	PWY-6992	1,5-anhydrofructose degradation
THITH_13600	PWY-7238	sucrose biosynthesis II
THITH_13600	PWY-7347	sucrose biosynthesis III
THITH_13600	PWY-7385	1,3-propanediol biosynthesis (engineered)
THITH_13605	PWY-622	starch biosynthesis
THITH_13610	PWY-1622	formaldehyde assimilation I (serine pathway)
THITH_13610	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
THITH_13610	PWY-5913	TCA cycle VI (obligate autotrophs)
THITH_13610	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THITH_13610	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
THITH_13610	PWY-6549	L-glutamine biosynthesis III
THITH_13610	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THITH_13610	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THITH_13610	PWY-7124	ethylene biosynthesis V (engineered)
THITH_13615	PWY-5155	&beta;-alanine biosynthesis III
THITH_13625	PWY-6654	phosphopantothenate biosynthesis III
THITH_13635	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THITH_13635	PWY-6148	tetrahydromethanopterin biosynthesis
THITH_13635	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
THITH_13635	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THITH_13635	PWY-7852	THITH_13635
THITH_13635	PWY-7853	THITH_13635
THITH_13685	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THITH_13690	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THITH_13690	PWY-6855	chitin degradation I (archaea)
THITH_13690	PWY-6906	chitin derivatives degradation
THITH_13900	PWY-5692	allantoin degradation to glyoxylate II
THITH_13900	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
THITH_13995	PWY-5381	pyridine nucleotide cycling (plants)
THITH_13995	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THITH_13995	PWY-7761	THITH_13995
THITH_14000	PWY-5392	reductive TCA cycle II
THITH_14000	PWY-5537	pyruvate fermentation to acetate V
THITH_14000	PWY-5538	pyruvate fermentation to acetate VI
THITH_14000	PWY-5690	TCA cycle II (plants and fungi)
THITH_14000	PWY-5913	TCA cycle VI (obligate autotrophs)
THITH_14000	PWY-6728	methylaspartate cycle
THITH_14000	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THITH_14000	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THITH_14005	PWY-5392	reductive TCA cycle II
THITH_14005	PWY-5537	pyruvate fermentation to acetate V
THITH_14005	PWY-5538	pyruvate fermentation to acetate VI
THITH_14005	PWY-5690	TCA cycle II (plants and fungi)
THITH_14005	PWY-5913	TCA cycle VI (obligate autotrophs)
THITH_14005	PWY-6728	methylaspartate cycle
THITH_14005	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THITH_14005	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THITH_14040	PWY-5381	pyridine nucleotide cycling (plants)
THITH_14040	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THITH_14040	PWY-7761	THITH_14040
THITH_14045	PWY-3341	L-proline biosynthesis III
THITH_14045	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
THITH_14065	PWY-4261	glycerol degradation I
THITH_14065	PWY-6118	glycerol-3-phosphate shuttle
THITH_14065	PWY-6952	glycerophosphodiester degradation
THITH_14070	PWY-5941	glycogen degradation II (eukaryotic)
THITH_14070	PWY-6731	starch degradation III
THITH_14070	PWY-6737	starch degradation V
THITH_14070	PWY-7238	sucrose biosynthesis II
THITH_14400	PWY-7851	THITH_14400
THITH_14410	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THITH_14410	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THITH_14410	PWY-6897	thiamin salvage II
THITH_14410	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
THITH_14410	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
THITH_14410	PWY-7356	thiamin salvage IV (yeast)
THITH_14410	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
THITH_14415	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THITH_14450	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THITH_14450	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THITH_14450	PWY-7953	THITH_14450
THITH_14455	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THITH_14455	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THITH_14455	PWY-7953	THITH_14455
THITH_14460	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THITH_14460	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THITH_14460	PWY-7953	THITH_14460
THITH_14465	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THITH_14465	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
THITH_14465	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THITH_14465	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THITH_14470	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THITH_14470	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
THITH_14470	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THITH_14470	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THITH_14475	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THITH_14475	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THITH_14480	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THITH_14480	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THITH_14480	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THITH_14485	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THITH_14485	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THITH_14485	PWY-7953	THITH_14485
THITH_14495	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THITH_14495	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THITH_14560	PWY-3781	aerobic respiration I (cytochrome c)
THITH_14560	PWY-6692	Fe(II) oxidation
THITH_14560	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
THITH_14560	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THITH_14585	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THITH_14585	PWY-6164	3-dehydroquinate biosynthesis I
THITH_14585	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THITH_14595	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THITH_14595	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THITH_14595	PWY-7953	THITH_14595
THITH_14640	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THITH_14640	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THITH_14720	PWY-7883	THITH_14720
THITH_14735	PWY-4983	L-citrulline-nitric oxide cycle
THITH_14735	PWY-4984	urea cycle
THITH_14735	PWY-5	canavanine biosynthesis
THITH_14735	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THITH_14735	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THITH_14740	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
THITH_14740	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THITH_14750	PWY-6891	thiazole biosynthesis II (Bacillus)
THITH_14750	PWY-6892	thiazole biosynthesis I (E. coli)
THITH_14750	PWY-7560	methylerythritol phosphate pathway II
THITH_14770	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
THITH_14790	PWY-7560	methylerythritol phosphate pathway II
THITH_14805	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THITH_14865	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THITH_14900	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THITH_14900	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
THITH_14900	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THITH_14900	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THITH_14910	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THITH_14910	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THITH_14910	PWY-7766	THITH_14910
THITH_14925	PWY-6164	3-dehydroquinate biosynthesis I
THITH_14955	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
THITH_14955	PWY-6269	adenosylcobalamin salvage from cobinamide II
THITH_14955	PWY-7961	THITH_14955
THITH_14955	PWY-7963	THITH_14955
THITH_14955	PWY-7964	THITH_14955
THITH_14955	PWY-7965	THITH_14955
THITH_14955	PWY-7966	THITH_14955
THITH_14955	PWY-7967	THITH_14955
THITH_14955	PWY-7968	THITH_14955
THITH_14955	PWY-7969	THITH_14955
THITH_14955	PWY-7970	THITH_14955
THITH_14955	PWY-7975	THITH_14955
THITH_14965	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
THITH_14965	PWY-6269	adenosylcobalamin salvage from cobinamide II
THITH_14965	PWY-7964	THITH_14965
THITH_14965	PWY-7965	THITH_14965
THITH_14965	PWY-7966	THITH_14965
THITH_14965	PWY-7967	THITH_14965
THITH_14965	PWY-7968	THITH_14965
THITH_14965	PWY-7969	THITH_14965
THITH_14965	PWY-7970	THITH_14965
THITH_14970	PWY-6269	adenosylcobalamin salvage from cobinamide II
THITH_14970	PWY-7962	THITH_14970
THITH_14970	PWY-7971	THITH_14970
THITH_14970	PWY-7972	THITH_14970
THITH_14980	PWY-5443	aminopropanol phosphate biosynthesis I
THITH_15185	PWY-5057	L-valine degradation II
THITH_15185	PWY-5076	L-leucine degradation III
THITH_15185	PWY-5078	L-isoleucine degradation II
THITH_15185	PWY-5101	L-isoleucine biosynthesis II
THITH_15185	PWY-5103	L-isoleucine biosynthesis III
THITH_15185	PWY-5104	L-isoleucine biosynthesis IV
THITH_15185	PWY-5108	L-isoleucine biosynthesis V
THITH_15185	PWY-7767	THITH_15185
THITH_15315	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THITH_15315	PWY-6416	quinate degradation II
THITH_15315	PWY-6707	gallate biosynthesis
THITH_15390	PWY-5101	L-isoleucine biosynthesis II
THITH_15390	PWY-5103	L-isoleucine biosynthesis III
THITH_15390	PWY-5104	L-isoleucine biosynthesis IV
THITH_15390	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THITH_15420	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THITH_15515	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THITH_15515	PWY-6148	tetrahydromethanopterin biosynthesis
THITH_15515	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
THITH_15515	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THITH_15515	PWY-7852	THITH_15515
THITH_15515	PWY-7853	THITH_15515
THITH_15520	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THITH_15520	PWY-6148	tetrahydromethanopterin biosynthesis
THITH_15520	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
THITH_15520	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THITH_15615	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THITH_15620	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THITH_15620	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THITH_15625	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THITH_15650	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
THITH_15655	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THITH_15655	PWY-6578	8-amino-7-oxononanoate biosynthesis III
THITH_15655	PWY-7147	8-amino-7-oxononanoate biosynthesis II
THITH_15675	PWY-7851	THITH_15675
THITH_15685	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THITH_15685	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THITH_15735	PWY-40	putrescine biosynthesis I
THITH_15735	PWY-43	putrescine biosynthesis II
THITH_15735	PWY-6305	putrescine biosynthesis IV
THITH_15735	PWY-6834	spermidine biosynthesis III
THITH_15835	PWY-6834	spermidine biosynthesis III
THITH_15860	PWY-5958	acridone alkaloid biosynthesis
THITH_15860	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THITH_15860	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THITH_15875	PWY-5958	acridone alkaloid biosynthesis
THITH_15875	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THITH_15875	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THITH_15880	PWY-181	photorespiration
THITH_15885	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THITH_15885	PWY-5723	Rubisco shunt
THITH_15910	PWY-6123	inosine-5'-phosphate biosynthesis I
THITH_15910	PWY-7234	inosine-5'-phosphate biosynthesis III
THITH_15915	PWY-6123	inosine-5'-phosphate biosynthesis I
THITH_15915	PWY-6124	inosine-5'-phosphate biosynthesis II
THITH_15915	PWY-7234	inosine-5'-phosphate biosynthesis III
THITH_15920	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
THITH_15930	PWY-1042	glycolysis IV (plant cytosol)
THITH_15930	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THITH_15930	PWY-5484	glycolysis II (from fructose 6-phosphate)
THITH_15930	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THITH_15930	PWY-7385	1,3-propanediol biosynthesis (engineered)
THITH_15935	PWY-1042	glycolysis IV (plant cytosol)
THITH_15935	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THITH_15935	PWY-5484	glycolysis II (from fructose 6-phosphate)
THITH_15935	PWY-5723	Rubisco shunt
THITH_15935	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THITH_15935	PWY-6886	1-butanol autotrophic biosynthesis
THITH_15935	PWY-6901	superpathway of glucose and xylose degradation
THITH_15935	PWY-7003	glycerol degradation to butanol
THITH_15935	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THITH_15935	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THITH_15940	PWY-1042	glycolysis IV (plant cytosol)
THITH_15940	PWY-5484	glycolysis II (from fructose 6-phosphate)
THITH_15940	PWY-6886	1-butanol autotrophic biosynthesis
THITH_15940	PWY-6901	superpathway of glucose and xylose degradation
THITH_15940	PWY-7003	glycerol degradation to butanol
THITH_15945	PWY-1042	glycolysis IV (plant cytosol)
THITH_15945	PWY-5484	glycolysis II (from fructose 6-phosphate)
THITH_15945	PWY-6901	superpathway of glucose and xylose degradation
THITH_15945	PWY-7003	glycerol degradation to butanol
THITH_15950	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THITH_15950	PWY-5723	Rubisco shunt
THITH_15950	PWY-6891	thiazole biosynthesis II (Bacillus)
THITH_15950	PWY-6892	thiazole biosynthesis I (E. coli)
THITH_15950	PWY-6901	superpathway of glucose and xylose degradation
THITH_15950	PWY-7560	methylerythritol phosphate pathway II
THITH_15955	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THITH_15955	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
THITH_15960	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THITH_15965	PWY-2201	folate transformations I
THITH_15965	PWY-3841	folate transformations II
THITH_16020	PWY-5686	UMP biosynthesis
THITH_16020	PWY-7790	THITH_16020
THITH_16020	PWY-7791	THITH_16020
THITH_16045	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THITH_16050	PWY-3341	L-proline biosynthesis III
THITH_16050	PWY-4981	L-proline biosynthesis II (from arginine)
THITH_16050	PWY-6344	L-ornithine degradation II (Stickland reaction)
THITH_16135	PWY-6840	homoglutathione biosynthesis
THITH_16135	PWY-7255	ergothioneine biosynthesis I (bacteria)
THITH_16205	PWY-5674	nitrate reduction IV (dissimilatory)
THITH_16215	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
THITH_16310	PWY-2201	folate transformations I
THITH_16310	PWY-3841	folate transformations II
THITH_16310	PWY-7977	THITH_16310
THITH_16315	PWY-7802	THITH_16315
THITH_16320	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THITH_16320	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
THITH_16335	PWY-6123	inosine-5'-phosphate biosynthesis I
THITH_16335	PWY-6124	inosine-5'-phosphate biosynthesis II
THITH_16335	PWY-7234	inosine-5'-phosphate biosynthesis III
THITH_16340	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THITH_16340	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THITH_16340	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THITH_16345	PWY-5941	glycogen degradation II (eukaryotic)
THITH_16345	PWY-6731	starch degradation III
THITH_16345	PWY-6737	starch degradation V
THITH_16345	PWY-7238	sucrose biosynthesis II
THITH_16370	PWY-1622	formaldehyde assimilation I (serine pathway)
THITH_16370	PWY-5392	reductive TCA cycle II
THITH_16370	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THITH_16370	PWY-5690	TCA cycle II (plants and fungi)
THITH_16370	PWY-5913	TCA cycle VI (obligate autotrophs)
THITH_16370	PWY-6728	methylaspartate cycle
THITH_16370	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THITH_16370	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THITH_16370	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THITH_16475	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
THITH_16525	PWY-3781	aerobic respiration I (cytochrome c)
THITH_16525	PWY-4521	arsenite oxidation I (respiratory)
THITH_16525	PWY-6692	Fe(II) oxidation
THITH_16525	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THITH_16530	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THITH_16745	PWY-1042	glycolysis IV (plant cytosol)
THITH_16745	PWY-5484	glycolysis II (from fructose 6-phosphate)
THITH_16745	PWY-6901	superpathway of glucose and xylose degradation
THITH_16745	PWY-7003	glycerol degradation to butanol
THITH_16850	PWY-5506	methanol oxidation to formaldehyde IV
THITH_16925	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THITH_17005	PWY-7980	THITH_17005
THITH_17015	PWY-7980	THITH_17015
THITH_17025	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THITH_17030	PWY-6749	CMP-legionaminate biosynthesis I
THITH_17100	PWY-5667	CDP-diacylglycerol biosynthesis I
THITH_17100	PWY-5981	CDP-diacylglycerol biosynthesis III
THITH_17100	PWY-7902	THITH_17100
THITH_17235	PWY-5686	UMP biosynthesis
THITH_17235	PWY-7790	THITH_17235
THITH_17235	PWY-7791	THITH_17235
THITH_17285	PWY-5686	UMP biosynthesis
THITH_17285	PWY-7790	THITH_17285
THITH_17285	PWY-7791	THITH_17285
THITH_17290	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
THITH_17320	PWY-5484	glycolysis II (from fructose 6-phosphate)
THITH_17325	PWY-1042	glycolysis IV (plant cytosol)
THITH_17325	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THITH_17325	PWY-5484	glycolysis II (from fructose 6-phosphate)
THITH_17325	PWY-7385	1,3-propanediol biosynthesis (engineered)
THITH_17340	PWY-7851	THITH_17340
THITH_17350	PWY-4041	&gamma;-glutamyl cycle
THITH_17350	PWY-4061	glutathione-mediated detoxification I
THITH_17350	PWY-5826	hypoglycin biosynthesis
THITH_17350	PWY-6842	glutathione-mediated detoxification II
THITH_17350	PWY-7112	4-hydroxy-2-nonenal detoxification
THITH_17350	PWY-7559	glutathione degradation (DUG pathway - yeast)
THITH_17370	PWY-6349	CDP-archaeol biosynthesis
THITH_17385	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THITH_17390	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THITH_17420	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
THITH_17455	PWY-7980	THITH_17455
THITH_17460	PWY-7980	THITH_17460
