TK90_0001 PF00308 Bacterial dnaA protein TK90_0001 PF08299 Bacterial dnaA protein helix-turn-helix TK90_0001 PF11638 DnaA N-terminal domain TK90_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain TK90_0002 PF02767 DNA polymerase III beta subunit, central domain TK90_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain TK90_0003 PF13476 AAA domain TK90_0004 PF00204 DNA gyrase B TK90_0004 PF00986 DNA gyrase B subunit, carboxyl terminus TK90_0004 PF01751 Toprim domain TK90_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_0006 PF01432 Peptidase family M3 TK90_0007 PF03372 Endonuclease/Exonuclease/phosphatase family TK90_0008 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TK90_0010 PF00111 2Fe-2S iron-sulfur cluster binding domain TK90_0010 PF00175 Oxidoreductase NAD-binding domain TK90_0010 PF00970 Oxidoreductase FAD-binding domain TK90_0011 PF02602 Uroporphyrinogen-III synthase HemD TK90_0012 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TK90_0012 PF03900 Porphobilinogen deaminase, C-terminal domain TK90_0013 PF00072 Response regulator receiver domain TK90_0013 PF04397 LytTr DNA-binding domain TK90_0014 PF06580 TK90_0014 TK90_0015 PF00206 Lyase TK90_0015 PF14698 Argininosuccinate lyase C-terminal TK90_0017 PF02696 TK90_0017 TK90_0018 PF00582 Universal stress protein family TK90_0019 PF00916 TK90_0019 TK90_0019 PF01740 STAS domain TK90_0020 PF01694 Rhomboid family TK90_0021 PF00593 TonB dependent receptor TK90_0021 PF07715 TonB-dependent Receptor Plug Domain TK90_0022 PF13609 Gram-negative porin TK90_0023 PF02028 BCCT family transporter TK90_0024 PF13609 Gram-negative porin TK90_0025 PF01047 MarR family TK90_0027 PF01546 Peptidase family M20/M25/M40 TK90_0027 PF07687 Peptidase dimerisation domain TK90_0028 PF00857 Isochorismatase family TK90_0029 PF00474 Sodium:solute symporter family TK90_0031 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TK90_0031 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TK90_0032 PF00733 Asparagine synthase TK90_0032 PF13537 Glutamine amidotransferase domain TK90_0033 PF00294 pfkB family carbohydrate kinase TK90_0034 PF00990 GGDEF domain TK90_0035 PF03372 Endonuclease/Exonuclease/phosphatase family TK90_0036 PF00205 Thiamine pyrophosphate enzyme, central domain TK90_0036 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TK90_0036 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TK90_0037 PF01323 DSBA-like thioredoxin domain TK90_0038 PF01578 TK90_0038 TK90_0039 PF05140 TK90_0039 TK90_0040 PF00034 Cytochrome c TK90_0041 PF01926 50S ribosome-binding GTPase TK90_0042 PF02630 SCO1/SenC TK90_0044 PF00476 DNA polymerase family A TK90_0044 PF01367 5'-3' exonuclease, C-terminal SAM fold TK90_0044 PF01612 3'-5' exonuclease TK90_0044 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TK90_0045 PF03641 Possible lysine decarboxylase TK90_0046 PF11191 Protein of unknown function (DUF2782) TK90_0048 PF13511 TK90_0048 TK90_0049 PF00512 His Kinase A (phospho-acceptor) domain TK90_0049 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_0049 PF08448 PAS fold TK90_0050 PF00072 Response regulator receiver domain TK90_0050 PF00158 Sigma-54 interaction domain TK90_0050 PF02954 Bacterial regulatory protein, Fis family TK90_0051 PF01180 Dihydroorotate dehydrogenase TK90_0052 PF00588 SpoU rRNA Methylase family TK90_0053 PF01738 Dienelactone hydrolase family TK90_0054 PF00365 Phosphofructokinase TK90_0055 PF00406 Adenylate kinase TK90_0055 PF05191 Adenylate kinase, active site lid TK90_0057 PF04976 TK90_0057 TK90_0058 PF12800 4Fe-4S binding domain TK90_0058 PF13247 4Fe-4S dicluster domain TK90_0059 PF00384 Molybdopterin oxidoreductase TK90_0059 PF01568 Molydopterin dinucleotide binding domain TK90_0059 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TK90_0060 PF12850 Calcineurin-like phosphoesterase superfamily domain TK90_0061 PF00571 CBS domain TK90_0062 PF01747 ATP-sulfurylase TK90_0062 PF14306 PUA-like domain TK90_0064 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit TK90_0064 PF13187 4Fe-4S dicluster domain TK90_0065 PF00890 FAD binding domain TK90_0065 PF02910 Fumarate reductase flavoprotein C-term TK90_0069 PF07690 Major Facilitator Superfamily TK90_0070 PF03372 Endonuclease/Exonuclease/phosphatase family TK90_0071 PF00156 Phosphoribosyl transferase domain TK90_0072 PF01476 LysM domain TK90_0073 PF13672 Protein phosphatase 2C TK90_0076 PF01609 Transposase DDE domain TK90_0076 PF05598 TK90_0076 TK90_0077 PF01427 D-ala-D-ala dipeptidase TK90_0078 PF00892 EamA-like transporter family TK90_0079 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TK90_0079 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TK90_0080 PF00753 Metallo-beta-lactamase superfamily TK90_0081 PF02417 TK90_0081 TK90_0082 PF09828 TK90_0082 TK90_0083 PF01610 TK90_0083 TK90_0083 PF13542 TK90_0083 TK90_0083 PF14690 TK90_0083 TK90_0084 PF00316 Fructose-1-6-bisphosphatase TK90_0085 PF00365 Phosphofructokinase TK90_0089 PF13432 Tetratricopeptide repeat TK90_0089 PF13529 Peptidase_C39 like family TK90_0091 PF01467 Cytidylyltransferase TK90_0092 PF12838 4Fe-4S dicluster domain TK90_0093 PF01019 Gamma-glutamyltranspeptidase TK90_0094 PF01649 Ribosomal protein S20 TK90_0095 PF02635 DsrE/DsrF-like family TK90_0096 PF00580 UvrD/REP helicase N-terminal domain TK90_0096 PF13361 UvrD-like helicase C-terminal domain TK90_0097 PF00676 Dehydrogenase E1 component TK90_0097 PF02779 Transketolase, pyrimidine binding domain TK90_0097 PF16078 TK90_0097 TK90_0097 PF16870 TK90_0097 TK90_0098 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TK90_0098 PF00364 Biotin-requiring enzyme TK90_0098 PF02817 e3 binding domain TK90_0099 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein TK90_0100 PF00672 HAMP domain TK90_0100 PF00990 GGDEF domain TK90_0101 PF03109 TK90_0101 TK90_0103 PF01209 ubiE/COQ5 methyltransferase family TK90_0104 PF06155 Protein of unknown function (DUF971) TK90_0107 PF13358 DDE superfamily endonuclease TK90_0107 PF13565 TK90_0107 TK90_0115 PF00004 ATPase family associated with various cellular activities (AAA) TK90_0115 PF07724 AAA domain (Cdc48 subfamily) TK90_0115 PF10431 C-terminal, D2-small domain, of ClpB protein TK90_0116 PF00227 Proteasome subunit TK90_0117 PF00589 Phage integrase family TK90_0117 PF02899 Phage integrase, N-terminal SAM-like domain TK90_0118 PF04340 Protein of unknown function, DUF484 TK90_0119 PF01678 Diaminopimelate epimerase TK90_0120 PF13649 Methyltransferase domain TK90_0121 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TK90_0121 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TK90_0122 PF13627 TK90_0122 TK90_0123 PF13501 Sulfur oxidation protein SoxY TK90_0124 PF08770 Sulphur oxidation protein SoxZ TK90_0125 PF00475 Imidazoleglycerol-phosphate dehydratase TK90_0126 PF00117 Glutamine amidotransferase class-I TK90_0127 PF00977 Histidine biosynthesis protein TK90_0128 PF00977 Histidine biosynthesis protein TK90_0129 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TK90_0130 PF02416 mttA/Hcf106 family TK90_0131 PF02416 mttA/Hcf106 family TK90_0132 PF00902 Sec-independent protein translocase protein (TatC) TK90_0133 PF01676 Metalloenzyme superfamily TK90_0133 PF06415 BPG-independent PGAM N-terminus (iPGM_N) TK90_0134 PF07883 Cupin domain TK90_0135 PF00069 Protein kinase domain TK90_0135 PF00672 HAMP domain TK90_0136 PF00498 FHA domain TK90_0137 PF17319 TK90_0137 TK90_0138 PF00990 GGDEF domain TK90_0140 PF01964 ThiC family TK90_0140 PF13667 ThiC-associated domain TK90_0141 PF01865 Protein of unknown function DUF47 TK90_0142 PF01384 TK90_0142 TK90_0143 PF04055 Radical SAM superfamily TK90_0143 PF06463 Molybdenum Cofactor Synthesis C TK90_0143 PF13353 4Fe-4S single cluster domain TK90_0144 PF00384 Molybdopterin oxidoreductase TK90_0144 PF01568 Molydopterin dinucleotide binding domain TK90_0144 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TK90_0145 PF12800 4Fe-4S binding domain TK90_0145 PF13247 4Fe-4S dicluster domain TK90_0146 PF04976 TK90_0146 TK90_0149 PF00034 Cytochrome c TK90_0149 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TK90_0150 PF01078 Magnesium chelatase, subunit ChlI TK90_0150 PF13335 TK90_0150 TK90_0150 PF13541 Subunit ChlI of Mg-chelatase TK90_0151 PF04380 TK90_0151 TK90_0152 PF13561 Enoyl-(Acyl carrier protein) reductase TK90_0153 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase TK90_0154 PF00814 Glycoprotease family TK90_0155 PF02660 TK90_0155 TK90_0156 PF12697 Alpha/beta hydrolase family TK90_0157 PF08241 Methyltransferase domain TK90_0158 PF00115 Cytochrome C and Quinol oxidase polypeptide I TK90_0159 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO TK90_0160 PF05545 TK90_0160 TK90_0161 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TK90_0161 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP TK90_0162 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase TK90_0162 PF12801 TK90_0162 TK90_0162 PF13746 4Fe-4S dicluster domain TK90_0163 PF05751 TK90_0163 TK90_0164 PF00122 E1-E2 ATPase TK90_0164 PF00403 Heavy-metal-associated domain TK90_0164 PF00702 haloacid dehalogenase-like hydrolase TK90_0164 PF12156 TK90_0164 TK90_0165 PF03597 TK90_0165 TK90_0167 PF04542 Sigma-70 region 2 TK90_0167 PF04545 Sigma-70, region 4 TK90_0169 PF00005 ABC transporter TK90_0170 PF00448 SRP54-type protein, GTPase domain TK90_0170 PF02881 SRP54-type protein, helical bundle domain TK90_0171 PF00675 Insulinase (Peptidase family M16) TK90_0171 PF05193 Peptidase M16 inactive domain TK90_0172 PF00675 Insulinase (Peptidase family M16) TK90_0172 PF05193 Peptidase M16 inactive domain TK90_0173 PF03602 Conserved hypothetical protein 95 TK90_0174 PF02028 BCCT family transporter TK90_0175 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TK90_0175 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TK90_0176 PF00343 Carbohydrate phosphorylase TK90_0177 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TK90_0177 PF02843 Phosphoribosylglycinamide synthetase, C domain TK90_0177 PF02844 Phosphoribosylglycinamide synthetase, N domain TK90_0178 PF01808 AICARFT/IMPCHase bienzyme TK90_0178 PF02142 MGS-like domain TK90_0179 PF13649 Methyltransferase domain TK90_0180 PF08241 Methyltransferase domain TK90_0181 PF04376 TK90_0181 TK90_0181 PF04377 TK90_0181 TK90_0182 PF00809 Pterin binding enzyme TK90_0182 PF02310 B12 binding domain TK90_0182 PF02574 Homocysteine S-methyltransferase TK90_0182 PF02607 B12 binding domain TK90_0182 PF02965 Vitamin B12 dependent methionine synthase, activation domain TK90_0183 PF01925 TK90_0183 TK90_0184 PF13511 TK90_0184 TK90_0185 PF00696 Amino acid kinase family TK90_0186 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TK90_0187 PF00115 Cytochrome C and Quinol oxidase polypeptide I TK90_0188 PF02630 SCO1/SenC TK90_0190 PF00042 Globin TK90_0190 PF00175 Oxidoreductase NAD-binding domain TK90_0190 PF00970 Oxidoreductase FAD-binding domain TK90_0191 PF07722 Peptidase C26 TK90_0192 PF12224 TK90_0192 TK90_0193 PF02152 Dihydroneopterin aldolase TK90_0194 PF09694 TK90_0194 TK90_0195 PF00543 Nitrogen regulatory protein P-II TK90_0196 PF00909 Ammonium Transporter Family TK90_0197 PF00005 ABC transporter TK90_0198 PF03649 TK90_0198 TK90_0199 PF15781 TK90_0199 TK90_0200 PF11903 TK90_0200 TK90_0201 PF01564 Spermine/spermidine synthase TK90_0201 PF17284 TK90_0201 TK90_0202 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TK90_0203 PF05166 YcgL domain TK90_0204 PF00009 Elongation factor Tu GTP binding domain TK90_0204 PF00679 Elongation factor G C-terminus TK90_0204 PF03144 Elongation factor Tu domain 2 TK90_0205 PF01850 PIN domain TK90_0206 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TK90_0208 PF07963 Prokaryotic N-terminal methylation motif TK90_0208 PF16732 TK90_0208 TK90_0210 PF05567 Neisseria PilC beta-propeller domain TK90_0211 PF13681 TK90_0211 TK90_0211 PF14341 TK90_0211 TK90_0212 PF07963 Prokaryotic N-terminal methylation motif TK90_0212 PF16074 TK90_0212 TK90_0213 PF07963 Prokaryotic N-terminal methylation motif TK90_0214 PF07963 Prokaryotic N-terminal methylation motif TK90_0214 PF12019 Type II transport protein GspH TK90_0215 PF07963 Prokaryotic N-terminal methylation motif TK90_0215 PF12019 Type II transport protein GspH TK90_0217 PF14341 TK90_0217 TK90_0218 PF07963 Prokaryotic N-terminal methylation motif TK90_0219 PF07963 Prokaryotic N-terminal methylation motif TK90_0219 PF12019 Type II transport protein GspH TK90_0220 PF07963 Prokaryotic N-terminal methylation motif TK90_0220 PF16732 TK90_0220 TK90_0221 PF03781 Sulfatase-modifying factor enzyme 1 TK90_0222 PF01548 TK90_0222 TK90_0222 PF02371 TK90_0222 TK90_0223 PF05015 Plasmid maintenance system killer protein TK90_0224 PF01381 Helix-turn-helix TK90_0225 PF00578 AhpC/TSA family TK90_0227 PF02445 Quinolinate synthetase A protein TK90_0228 PF01548 TK90_0228 TK90_0228 PF02371 TK90_0228 TK90_0232 PF00578 AhpC/TSA family TK90_0233 PF00175 Oxidoreductase NAD-binding domain TK90_0233 PF00970 Oxidoreductase FAD-binding domain TK90_0234 PF12146 Putative lysophospholipase TK90_0235 PF04325 Protein of unknown function (DUF465) TK90_0236 PF07992 Pyridine nucleotide-disulphide oxidoreductase TK90_0236 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding TK90_0236 PF10518 TAT (twin-arginine translocation) pathway signal sequence TK90_0237 PF00034 Cytochrome c TK90_0238 PF07238 PilZ domain TK90_0239 PF12616 TK90_0239 TK90_0240 PF10052 Protein of unknown function (DUF2288) TK90_0242 PF00072 Response regulator receiver domain TK90_0242 PF00486 Transcriptional regulatory protein, C terminal TK90_0243 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_0244 PF01266 FAD dependent oxidoreductase TK90_0245 PF00271 Helicase conserved C-terminal domain TK90_0245 PF04408 Helicase associated domain (HA2) TK90_0245 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold TK90_0245 PF11898 TK90_0245 TK90_0246 PF05036 Sporulation related domain TK90_0247 PF00750 tRNA synthetases class I (R) TK90_0247 PF03485 Arginyl tRNA synthetase N terminal domain TK90_0247 PF05746 DALR anticodon binding domain TK90_0248 PF00270 DEAD/DEAH box helicase TK90_0249 PF02233 NAD(P) transhydrogenase beta subunit TK90_0250 PF12769 Domain of unknown function (DUF3814) TK90_0251 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TK90_0251 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TK90_0252 PF14279 TK90_0252 TK90_0253 PF00762 Ferrochelatase TK90_0254 PF00994 Probable molybdopterin binding domain TK90_0255 PF13640 2OG-Fe(II) oxygenase superfamily TK90_0256 PF00317 Ribonucleotide reductase, all-alpha domain TK90_0256 PF02867 Ribonucleotide reductase, barrel domain TK90_0256 PF14528 LAGLIDADG-like domain TK90_0256 PF14890 Intein splicing domain TK90_0260 PF00665 Integrase core domain TK90_0260 PF13276 TK90_0260 TK90_0261 PF01527 Transposase TK90_0263 PF00140 Sigma-70 factor, region 1 TK90_0263 PF03979 Sigma-70 factor, region 1 TK90_0263 PF04539 Sigma-70 region 3 TK90_0263 PF04542 Sigma-70 region 2 TK90_0263 PF04545 Sigma-70, region 4 TK90_0263 PF04546 Sigma-70, non-essential region TK90_0264 PF01807 CHC2 zinc finger TK90_0264 PF08275 DNA primase catalytic core, N-terminal domain TK90_0264 PF08278 DNA primase DnaG DnaB-binding TK90_0264 PF10410 DnaB-helicase binding domain of primase TK90_0264 PF13662 Toprim domain TK90_0265 PF00310 Glutamine amidotransferases class-II TK90_0265 PF01493 GXGXG motif TK90_0265 PF01645 Conserved region in glutamate synthase TK90_0265 PF04898 Glutamate synthase central domain TK90_0266 PF05036 Sporulation related domain TK90_0267 PF01966 HD domain TK90_0267 PF13286 Phosphohydrolase-associated domain TK90_0268 PF01761 3-dehydroquinate synthase TK90_0269 PF01165 Ribosomal protein S21 TK90_0270 PF09424 Yqey-like protein TK90_0271 PF07992 Pyridine nucleotide-disulphide oxidoreductase TK90_0271 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TK90_0272 PF01208 Uroporphyrinogen decarboxylase (URO-D) TK90_0274 PF00905 Penicillin binding protein transpeptidase domain TK90_0274 PF00912 Transglycosylase TK90_0274 PF17092 TK90_0274 TK90_0275 PF11104 Type IV pilus assembly protein PilM; TK90_0276 PF05137 TK90_0276 TK90_0277 PF04350 Pilus assembly protein, PilO TK90_0278 PF04351 Pilus assembly protein, PilP TK90_0279 PF00263 TK90_0279 TK90_0279 PF03958 Bacterial type II/III secretion system short domain TK90_0279 PF07660 Secretin and TonB N terminus short domain TK90_0279 PF11741 AMIN domain TK90_0280 PF01202 Shikimate kinase TK90_0281 PF13474 SnoaL-like domain TK90_0282 PF13474 SnoaL-like domain TK90_0283 PF00294 pfkB family carbohydrate kinase TK90_0284 PF00578 AhpC/TSA family TK90_0285 PF02683 TK90_0285 TK90_0285 PF11412 Disulphide bond corrector protein DsbC TK90_0285 PF13899 Thioredoxin-like TK90_0286 PF03091 CutA1 divalent ion tolerance protein TK90_0287 PF13437 HlyD family secretion protein TK90_0287 PF13533 Biotin-lipoyl like TK90_0288 PF02321 Outer membrane efflux protein TK90_0289 PF13098 Thioredoxin-like domain TK90_0290 PF04186 TK90_0290 TK90_0291 PF00166 Chaperonin 10 Kd subunit TK90_0292 PF00118 TCP-1/cpn60 chaperonin family TK90_0293 PF00691 OmpA family TK90_0294 PF13098 Thioredoxin-like domain TK90_0295 PF04357 TK90_0295 TK90_0296 PF01103 Surface antigen TK90_0296 PF07244 Surface antigen variable number repeat TK90_0296 PF17243 TK90_0296 TK90_0297 PF00005 ABC transporter TK90_0297 PF08402 TOBE domain TK90_0298 PF00528 Binding-protein-dependent transport system inner membrane component TK90_0299 PF13343 Bacterial extracellular solute-binding protein TK90_0300 PF03710 Glutamate-ammonia ligase adenylyltransferase TK90_0300 PF08335 GlnD PII-uridylyltransferase TK90_0301 PF01063 Aminotransferase class IV TK90_0302 PF10276 Zinc-finger domain TK90_0303 PF00294 pfkB family carbohydrate kinase TK90_0303 PF01467 Cytidylyltransferase TK90_0304 PF01370 NAD dependent epimerase/dehydratase family TK90_0305 PF11004 TK90_0305 TK90_0306 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family TK90_0307 PF01075 Glycosyltransferase family 9 (heptosyltransferase) TK90_0308 PF03279 TK90_0308 TK90_0310 PF00005 ABC transporter TK90_0310 PF00664 ABC transporter transmembrane region TK90_0311 PF00535 Glycosyl transferase family 2 TK90_0312 PF00534 Glycosyl transferases group 1 TK90_0312 PF13439 Glycosyltransferase Family 4 TK90_0313 PF00534 Glycosyl transferases group 1 TK90_0313 PF13439 Glycosyltransferase Family 4 TK90_0314 PF04932 TK90_0314 TK90_0315 PF01075 Glycosyltransferase family 9 (heptosyltransferase) TK90_0316 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family TK90_0317 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family TK90_0318 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family TK90_0319 PF00534 Glycosyl transferases group 1 TK90_0320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) TK90_0321 PF13580 SIS domain TK90_0322 PF13242 HAD-hyrolase-like TK90_0323 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) TK90_0324 PF10263 TK90_0324 TK90_0326 PF00570 HRDC domain TK90_0326 PF01612 3'-5' exonuclease TK90_0327 PF06844 Protein of unknown function (DUF1244) TK90_0328 PF04093 TK90_0328 TK90_0329 PF04085 rod shape-determining protein MreC TK90_0330 PF06723 MreB/Mbl protein TK90_0331 PF02686 Glu-tRNAGln amidotransferase C subunit TK90_0332 PF01425 Amidase TK90_0333 PF02637 GatB domain TK90_0333 PF02934 GatB/GatE catalytic domain TK90_0334 PF01430 Hsp33 protein TK90_0336 PF00899 ThiF family TK90_0338 PF01610 TK90_0338 TK90_0338 PF13542 TK90_0338 TK90_0338 PF14690 TK90_0338 TK90_0339 PF13847 Methyltransferase domain TK90_0340 PF00472 RF-1 domain TK90_0340 PF03462 PCRF domain TK90_0341 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain TK90_0341 PF01488 Shikimate / quinate 5-dehydrogenase TK90_0341 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain TK90_0342 PF13176 Tetratricopeptide repeat TK90_0342 PF13432 Tetratricopeptide repeat TK90_0342 PF14559 Tetratricopeptide repeat TK90_0343 PF03550 Outer membrane lipoprotein LolB TK90_0344 PF00288 GHMP kinases N terminal domain TK90_0344 PF08544 GHMP kinases C terminal TK90_0345 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TK90_0345 PF14572 Phosphoribosyl synthetase-associated domain TK90_0346 PF01386 Ribosomal L25p family TK90_0346 PF14693 Ribosomal protein TL5, C-terminal domain TK90_0347 PF01195 Peptidyl-tRNA hydrolase TK90_0348 PF01926 50S ribosome-binding GTPase TK90_0348 PF06071 Protein of unknown function (DUF933) TK90_0349 PF00462 Glutaredoxin TK90_0350 PF00929 Exonuclease TK90_0351 PF00456 Transketolase, thiamine diphosphate binding domain TK90_0352 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TK90_0352 PF00364 Biotin-requiring enzyme TK90_0352 PF02817 e3 binding domain TK90_0353 PF00364 Biotin-requiring enzyme TK90_0353 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TK90_0353 PF07992 Pyridine nucleotide-disulphide oxidoreductase TK90_0354 PF00691 OmpA family TK90_0355 PF00764 Arginosuccinate synthase TK90_0356 PF00990 GGDEF domain TK90_0356 PF08448 PAS fold TK90_0356 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein TK90_0357 PF04333 TK90_0357 TK90_0359 PF01225 Mur ligase family, catalytic domain TK90_0359 PF02875 Mur ligase family, glutamate ligase domain TK90_0359 PF08245 Mur ligase middle domain TK90_0360 PF02441 Flavoprotein TK90_0361 PF02190 ATP-dependent protease La (LON) domain TK90_0362 PF00085 Thioredoxin TK90_0363 PF03547 TK90_0363 TK90_0364 PF01699 Sodium/calcium exchanger protein TK90_0365 PF00571 CBS domain TK90_0365 PF01380 SIS domain TK90_0366 PF08282 haloacid dehalogenase-like hydrolase TK90_0367 PF06835 Lipopolysaccharide-assembly, LptC-related TK90_0368 PF03968 OstA-like protein TK90_0369 PF00005 ABC transporter TK90_0369 PF12399 Branched-chain amino acid ATP-binding cassette transporter TK90_0370 PF00309 TK90_0370 TK90_0370 PF04552 Sigma-54, DNA binding domain TK90_0370 PF04963 Sigma-54 factor, core binding domain TK90_0371 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TK90_0372 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TK90_0373 PF02603 HPr Serine kinase N terminus TK90_0373 PF07475 HPr Serine kinase C-terminal domain TK90_0374 PF03668 TK90_0374 TK90_0375 PF03610 PTS system fructose IIA component TK90_0376 PF00381 PTS HPr component phosphorylation site TK90_0377 PF00155 Aminotransferase class I and II TK90_0378 PF00815 Histidinol dehydrogenase TK90_0379 PF00793 DAHP synthetase I family TK90_0380 PF01634 ATP phosphoribosyltransferase TK90_0381 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TK90_0382 PF13466 STAS domain TK90_0383 PF05494 Toluene tolerance, Ttg2 TK90_0384 PF02470 TK90_0384 TK90_0385 PF02405 TK90_0385 TK90_0386 PF00005 ABC transporter TK90_0388 PF00296 Luciferase-like monooxygenase TK90_0389 PF01370 NAD dependent epimerase/dehydratase family TK90_0390 PF01925 TK90_0390 TK90_0391 PF00202 Aminotransferase class-III TK90_0392 PF02581 Thiamine monophosphate synthase/TENI TK90_0393 PF08543 Phosphomethylpyrimidine kinase TK90_0395 PF12710 haloacid dehalogenase-like hydrolase TK90_0396 PF00293 NUDIX domain TK90_0397 PF00391 PEP-utilising enzyme, mobile domain TK90_0397 PF01590 GAF domain TK90_0397 PF02896 PEP-utilising enzyme, TIM barrel domain TK90_0397 PF05524 PEP-utilising enzyme, N-terminal TK90_0398 PF03653 TK90_0398 TK90_0399 PF00578 AhpC/TSA family TK90_0400 PF01118 Semialdehyde dehydrogenase, NAD binding domain TK90_0400 PF02774 Semialdehyde dehydrogenase, dimerisation domain TK90_0402 PF04519 TK90_0402 TK90_0403 PF01521 Iron-sulphur cluster biosynthesis TK90_0404 PF03702 Uncharacterised protein family (UPF0075) TK90_0405 PF00579 tRNA synthetases class I (W and Y) TK90_0405 PF01479 S4 domain TK90_0407 PF00872 TK90_0407 TK90_0408 PF00753 Metallo-beta-lactamase superfamily TK90_0409 PF06804 NlpB/DapX lipoprotein TK90_0410 PF00701 Dihydrodipicolinate synthetase family TK90_0411 PF13740 ACT domain TK90_0412 PF00578 AhpC/TSA family TK90_0413 PF02562 PhoH-like protein TK90_0413 PF13638 PIN domain TK90_0414 PF01242 6-pyruvoyl tetrahydropterin synthase TK90_0415 PF02779 Transketolase, pyrimidine binding domain TK90_0415 PF02780 Transketolase, C-terminal domain TK90_0415 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TK90_0416 PF00348 Polyprenyl synthetase TK90_0417 PF02609 Exonuclease VII small subunit TK90_0418 PF02915 Rubrerythrin TK90_0419 PF02754 TK90_0419 TK90_0421 PF12007 Protein of unknown function (DUF3501) TK90_0422 PF01548 TK90_0422 TK90_0422 PF02371 TK90_0422 TK90_0423 PF13481 AAA domain TK90_0423 PF13541 Subunit ChlI of Mg-chelatase TK90_0424 PF00571 CBS domain TK90_0424 PF01595 TK90_0424 TK90_0424 PF03471 Transporter associated domain TK90_0425 PF01578 TK90_0425 TK90_0426 PF00448 SRP54-type protein, GTPase domain TK90_0426 PF02881 SRP54-type protein, helical bundle domain TK90_0426 PF02978 Signal peptide binding domain TK90_0427 PF00886 Ribosomal protein S16 TK90_0428 PF01782 RimM N-terminal domain TK90_0428 PF05239 PRC-barrel domain TK90_0429 PF01746 tRNA (Guanine-1)-methyltransferase TK90_0430 PF01245 Ribosomal protein L19 TK90_0431 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TK90_0433 PF00034 Cytochrome c TK90_0434 PF00034 Cytochrome c TK90_0435 PF00183 Hsp90 protein TK90_0435 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_0436 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TK90_0437 PF04324 BFD-like [2Fe-2S] binding domain TK90_0438 PF01618 TK90_0438 TK90_0439 PF02472 Biopolymer transport protein ExbD/TolR TK90_0440 PF02472 Biopolymer transport protein ExbD/TolR TK90_0441 PF03544 Gram-negative bacterial TonB protein C-terminal TK90_0443 PF00210 Ferritin-like domain TK90_0444 PF10636 Hemin uptake protein hemP TK90_0445 PF00593 TonB dependent receptor TK90_0445 PF07715 TonB-dependent Receptor Plug Domain TK90_0448 PF08238 Sel1 repeat TK90_0453 PF03692 TK90_0453 TK90_0454 PF06094 AIG2-like family TK90_0456 PF02463 RecF/RecN/SMC N terminal domain TK90_0457 PF01513 ATP-NAD kinase TK90_0458 PF01628 HrcA protein C terminal domain TK90_0458 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding TK90_0459 PF01025 GrpE TK90_0460 PF00012 Hsp70 protein TK90_0461 PF00226 DnaJ domain TK90_0461 PF00684 DnaJ central domain TK90_0461 PF01556 DnaJ C terminal domain TK90_0462 PF00563 EAL domain TK90_0462 PF00990 GGDEF domain TK90_0464 PF04055 Radical SAM superfamily TK90_0464 PF13394 4Fe-4S single cluster domain TK90_0465 PF01132 Elongation factor P (EF-P) OB domain TK90_0465 PF08207 Elongation factor P (EF-P) KOW-like domain TK90_0465 PF09285 Elongation factor P, C-terminal TK90_0466 PF00152 tRNA synthetases class II (D, K and N) TK90_0467 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family TK90_0468 PF09601 TK90_0468 TK90_0469 PF06295 TK90_0469 TK90_0471 PF00535 Glycosyl transferase family 2 TK90_0472 PF13561 Enoyl-(Acyl carrier protein) reductase TK90_0474 PF13723 TK90_0474 TK90_0475 PF00109 Beta-ketoacyl synthase, N-terminal domain TK90_0475 PF02801 Beta-ketoacyl synthase, C-terminal domain TK90_0476 PF03176 MMPL family TK90_0478 PF03279 TK90_0478 TK90_0479 PF07977 FabA-like domain TK90_0480 PF00501 AMP-binding enzyme TK90_0482 PF00550 Phosphopantetheine attachment site TK90_0483 PF02698 DUF218 domain TK90_0484 PF00133 tRNA synthetases class I (I, L, M and V) TK90_0484 PF08264 Anticodon-binding domain of tRNA TK90_0484 PF10458 Valyl tRNA synthetase tRNA binding arm TK90_0485 PF13460 NADH(P)-binding TK90_0487 PF00226 DnaJ domain TK90_0487 PF12339 TK90_0487 TK90_0488 PF00175 Oxidoreductase NAD-binding domain TK90_0488 PF00970 Oxidoreductase FAD-binding domain TK90_0489 PF00563 EAL domain TK90_0489 PF00990 GGDEF domain TK90_0489 PF08448 PAS fold TK90_0489 PF13426 PAS domain TK90_0490 PF08331 TK90_0490 TK90_0490 PF13484 TK90_0490 TK90_0491 PF01256 Carbohydrate kinase TK90_0491 PF03853 YjeF-related protein N-terminus TK90_0492 PF02367 Uncharacterised P-loop hydrolase UPF0079 TK90_0493 PF01476 LysM domain TK90_0493 PF01520 N-acetylmuramoyl-L-alanine amidase TK90_0493 PF11741 AMIN domain TK90_0494 PF01119 DNA mismatch repair protein, C-terminal domain TK90_0494 PF08676 MutL C terminal dimerisation domain TK90_0494 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_0495 PF01715 IPP transferase TK90_0496 PF17209 TK90_0496 TK90_0497 PF01926 50S ribosome-binding GTPase TK90_0497 PF13167 TK90_0497 TK90_0497 PF16360 TK90_0497 TK90_0498 PF01464 Transglycosylase SLT domain TK90_0498 PF01476 LysM domain TK90_0500 PF00075 RNase H TK90_0501 PF00929 Exonuclease TK90_0502 PF02080 TrkA-C domain TK90_0502 PF03600 Citrate transporter TK90_0503 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TK90_0503 PF03129 Anticodon binding domain TK90_0503 PF04073 Aminoacyl-tRNA editing domain TK90_0504 PF01187 Macrophage migration inhibitory factor (MIF) TK90_0505 PF16576 TK90_0505 TK90_0506 PF00873 AcrB/AcrD/AcrF family TK90_0509 PF07670 Nucleoside recognition TK90_0510 PF00106 short chain dehydrogenase TK90_0511 PF02635 DsrE/DsrF-like family TK90_0512 PF09723 TK90_0512 TK90_0513 PF04367 TK90_0513 TK90_0514 PF00152 tRNA synthetases class II (D, K and N) TK90_0514 PF01336 OB-fold nucleic acid binding domain TK90_0514 PF02938 GAD domain TK90_0515 PF12697 Alpha/beta hydrolase family TK90_0516 PF00534 Glycosyl transferases group 1 TK90_0516 PF12038 TK90_0516 TK90_0517 PF00563 EAL domain TK90_0517 PF00990 GGDEF domain TK90_0517 PF08447 PAS fold TK90_0517 PF08448 PAS fold TK90_0517 PF13426 PAS domain TK90_0518 PF01355 High potential iron-sulfur protein TK90_0519 PF13505 Outer membrane protein beta-barrel domain TK90_0520 PF00122 E1-E2 ATPase TK90_0520 PF00689 Cation transporting ATPase, C-terminus TK90_0520 PF00690 Cation transporter/ATPase, N-terminus TK90_0520 PF00702 haloacid dehalogenase-like hydrolase TK90_0521 PF00563 EAL domain TK90_0521 PF00990 GGDEF domain TK90_0521 PF13185 GAF domain TK90_0522 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TK90_0525 PF01596 O-methyltransferase TK90_0526 PF03773 TK90_0526 TK90_0527 PF05425 TK90_0527 TK90_0528 PF11697 TK90_0528 TK90_0529 PF00990 GGDEF domain TK90_0529 PF08447 PAS fold TK90_0529 PF12729 TK90_0529 TK90_0530 PF00563 EAL domain TK90_0530 PF00990 GGDEF domain TK90_0530 PF01590 GAF domain TK90_0530 PF08448 PAS fold TK90_0531 PF13091 PLD-like domain TK90_0531 PF13396 TK90_0531 TK90_0532 PF00521 DNA gyrase/topoisomerase IV, subunit A TK90_0532 PF03989 DNA gyrase C-terminal domain, beta-propeller TK90_0533 PF00072 Response regulator receiver domain TK90_0533 PF00563 EAL domain TK90_0533 PF00990 GGDEF domain TK90_0534 PF00072 Response regulator receiver domain TK90_0534 PF00512 His Kinase A (phospho-acceptor) domain TK90_0534 PF00989 PAS fold TK90_0534 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_0535 PF01435 Peptidase family M48 TK90_0536 PF00753 Metallo-beta-lactamase superfamily TK90_0537 PF00512 His Kinase A (phospho-acceptor) domain TK90_0537 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_0538 PF00072 Response regulator receiver domain TK90_0538 PF00158 Sigma-54 interaction domain TK90_0538 PF02954 Bacterial regulatory protein, Fis family TK90_0540 PF13767 TK90_0540 TK90_0541 PF00572 Ribosomal protein L13 TK90_0542 PF00380 Ribosomal protein S9/S16 TK90_0543 PF00753 Metallo-beta-lactamase superfamily TK90_0544 PF11295 TK90_0544 TK90_0545 PF01565 FAD binding domain TK90_0545 PF02754 TK90_0545 TK90_0545 PF02913 FAD linked oxidases, C-terminal domain TK90_0545 PF11880 TK90_0545 TK90_0545 PF12447 TK90_0545 TK90_0545 PF13183 4Fe-4S dicluster domain TK90_0546 PF00581 Rhodanese-like domain TK90_0547 PF11146 TK90_0547 TK90_0548 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) TK90_0549 PF00291 Pyridoxal-phosphate dependent enzyme TK90_0549 PF00585 C-terminal regulatory domain of Threonine dehydratase TK90_0550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TK90_0550 PF07992 Pyridine nucleotide-disulphide oxidoreductase TK90_0551 PF11306 Protein of unknown function (DUF3108) TK90_0552 PF00551 Formyl transferase TK90_0553 PF00586 AIR synthase related protein, N-terminal domain TK90_0553 PF02769 AIR synthase related protein, C-terminal domain TK90_0554 PF09839 TK90_0554 TK90_0555 PF01594 TK90_0555 TK90_0556 PF00308 Bacterial dnaA protein TK90_0557 PF09842 TK90_0557 TK90_0558 PF03358 NADPH-dependent FMN reductase TK90_0559 PF03960 ArsC family TK90_0560 PF00708 Acylphosphatase TK90_0561 PF05491 Holliday junction DNA helicase ruvB C-terminus TK90_0561 PF05496 Holliday junction DNA helicase ruvB N-terminus TK90_0562 PF03061 Thioesterase superfamily TK90_0563 PF01618 TK90_0563 TK90_0564 PF02472 Biopolymer transport protein ExbD/TolR TK90_0565 PF13103 TonB C terminal TK90_0566 PF04052 TolB amino-terminal domain TK90_0566 PF07676 WD40-like Beta Propeller Repeat TK90_0567 PF00691 OmpA family TK90_0568 PF13174 Tetratricopeptide repeat TK90_0568 PF13525 Outer membrane lipoprotein TK90_0568 PF16331 TK90_0568 TK90_0569 PF04055 Radical SAM superfamily TK90_0569 PF13394 4Fe-4S single cluster domain TK90_0570 PF06508 Queuosine biosynthesis protein QueC TK90_0571 PF04143 TK90_0571 TK90_0572 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TK90_0572 PF05697 Bacterial trigger factor protein (TF) TK90_0572 PF05698 Bacterial trigger factor protein (TF) C-terminus TK90_0573 PF00574 Clp protease TK90_0574 PF06689 ClpX C4-type zinc finger TK90_0574 PF07724 AAA domain (Cdc48 subfamily) TK90_0574 PF10431 C-terminal, D2-small domain, of ClpB protein TK90_0575 PF00004 ATPase family associated with various cellular activities (AAA) TK90_0575 PF02190 ATP-dependent protease La (LON) domain TK90_0575 PF05362 Lon protease (S16) C-terminal proteolytic domain TK90_0576 PF00216 Bacterial DNA-binding protein TK90_0577 PF00691 OmpA family TK90_0577 PF13677 TK90_0577 TK90_0578 PF01618 TK90_0578 TK90_0579 PF08668 HDOD domain TK90_0580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TK90_0580 PF08447 PAS fold TK90_0581 PF09694 TK90_0581 TK90_0582 PF04551 GcpE protein TK90_0585 PF13650 Aspartyl protease TK90_0586 PF11700 TK90_0586 TK90_0587 PF01914 TK90_0587 TK90_0588 PF00291 Pyridoxal-phosphate dependent enzyme TK90_0589 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB TK90_0590 PF05958 tRNA (Uracil-5-)-methyltransferase TK90_0591 PF01618 TK90_0591 TK90_0592 PF02472 Biopolymer transport protein ExbD/TolR TK90_0593 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) TK90_0594 PF02606 Tetraacyldisaccharide-1-P 4'-kinase TK90_0595 PF03966 Trm112p-like protein TK90_0596 PF02348 Cytidylyltransferase TK90_0597 PF13616 PPIC-type PPIASE domain TK90_0597 PF13624 SurA N-terminal domain TK90_0598 PF13561 Enoyl-(Acyl carrier protein) reductase TK90_0599 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TK90_0600 PF00528 Binding-protein-dependent transport system inner membrane component TK90_0601 PF00528 Binding-protein-dependent transport system inner membrane component TK90_0602 PF00005 ABC transporter TK90_0602 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TK90_0603 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TK90_0603 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TK90_0604 PF00990 GGDEF domain TK90_0605 PF02719 Polysaccharide biosynthesis protein TK90_0605 PF13727 CoA-binding domain TK90_0606 PF00953 Glycosyl transferase family 4 TK90_0607 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TK90_0608 PF03328 HpcH/HpaI aldolase/citrate lyase family TK90_0609 PF02397 TK90_0609 TK90_0610 PF00534 Glycosyl transferases group 1 TK90_0610 PF13477 Glycosyl transferase 4-like TK90_0611 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TK90_0611 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TK90_0611 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TK90_0612 PF13231 TK90_0612 TK90_0613 PF13439 Glycosyltransferase Family 4 TK90_0613 PF13692 Glycosyl transferases group 1 TK90_0616 PF14397 TK90_0616 TK90_0617 PF00005 ABC transporter TK90_0617 PF00664 ABC transporter transmembrane region TK90_0618 PF16363 TK90_0618 TK90_0619 PF02563 Polysaccharide biosynthesis/export protein TK90_0619 PF10531 SLBB domain TK90_0620 PF01451 Low molecular weight phosphotyrosine protein phosphatase TK90_0621 PF02706 Chain length determinant protein TK90_0621 PF13614 AAA domain TK90_0621 PF13807 TK90_0621 TK90_0622 PF06082 TK90_0622 TK90_0623 PF06251 Capsule biosynthesis GfcC TK90_0624 PF11102 Group 4 capsule polysaccharide formation lipoprotein gfcB TK90_0626 PF16998 TK90_0626 TK90_0627 PF02872 5'-nucleotidase, C-terminal domain TK90_0628 PF01435 Peptidase family M48 TK90_0628 PF14559 Tetratricopeptide repeat TK90_0630 PF00581 Rhodanese-like domain TK90_0631 PF01206 Sulfurtransferase TusA TK90_0632 PF13183 4Fe-4S dicluster domain TK90_0633 PF02754 TK90_0633 TK90_0634 PF07992 Pyridine nucleotide-disulphide oxidoreductase TK90_0636 PF13183 4Fe-4S dicluster domain TK90_0637 PF02754 TK90_0637 TK90_0638 PF01597 Glycine cleavage H-protein TK90_0639 PF02635 DsrE/DsrF-like family TK90_0640 PF01597 Glycine cleavage H-protein TK90_0641 PF04055 Radical SAM superfamily TK90_0643 PF01266 FAD dependent oxidoreductase TK90_0644 PF04055 Radical SAM superfamily TK90_0645 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) TK90_0651 PF07728 AAA domain (dynein-related subfamily) TK90_0651 PF08406 TK90_0651 TK90_0653 PF00850 Histone deacetylase domain TK90_0654 PF10604 Polyketide cyclase / dehydrase and lipid transport TK90_0655 PF07690 Major Facilitator Superfamily TK90_0656 PF01926 50S ribosome-binding GTPase TK90_0657 PF01926 50S ribosome-binding GTPase TK90_0657 PF05128 TK90_0657 TK90_0658 PF00004 ATPase family associated with various cellular activities (AAA) TK90_0658 PF12002 MgsA AAA+ ATPase C terminal TK90_0658 PF16193 TK90_0658 TK90_0659 PF09335 TK90_0659 TK90_0660 PF00535 Glycosyl transferase family 2 TK90_0661 PF09837 Uncharacterized protein conserved in bacteria (DUF2064) TK90_0663 PF02635 DsrE/DsrF-like family TK90_0664 PF03861 ANTAR domain TK90_0664 PF08376 Nitrate and nitrite sensing TK90_0665 PF13379 NMT1-like family TK90_0666 PF00528 Binding-protein-dependent transport system inner membrane component TK90_0667 PF00005 ABC transporter TK90_0668 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TK90_0668 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TK90_0668 PF04324 BFD-like [2Fe-2S] binding domain TK90_0668 PF07992 Pyridine nucleotide-disulphide oxidoreductase TK90_0669 PF13806 Rieske-like [2Fe-2S] domain TK90_0670 PF00384 Molybdopterin oxidoreductase TK90_0670 PF01568 Molydopterin dinucleotide binding domain TK90_0670 PF04324 BFD-like [2Fe-2S] binding domain TK90_0670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TK90_0671 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TK90_0671 PF10414 Sirohaem synthase dimerisation region TK90_0671 PF13241 Putative NAD(P)-binding TK90_0671 PF14824 Sirohaem biosynthesis protein central TK90_0672 PF02602 Uroporphyrinogen-III synthase HemD TK90_0673 PF00501 AMP-binding enzyme TK90_0674 PF03824 TK90_0674 TK90_0675 PF06226 TK90_0675 TK90_0676 PF01406 tRNA synthetases class I (C) catalytic domain TK90_0676 PF09190 DALR domain TK90_0677 PF01502 Phosphoribosyl-AMP cyclohydrolase TK90_0678 PF00512 His Kinase A (phospho-acceptor) domain TK90_0678 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_0678 PF08447 PAS fold TK90_0678 PF13426 PAS domain TK90_0679 PF00072 Response regulator receiver domain TK90_0680 PF00072 Response regulator receiver domain TK90_0680 PF00563 EAL domain TK90_0680 PF00989 PAS fold TK90_0680 PF00990 GGDEF domain TK90_0680 PF01590 GAF domain TK90_0680 PF13185 GAF domain TK90_0680 PF13426 PAS domain TK90_0681 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family TK90_0682 PF01925 TK90_0682 TK90_0683 PF02492 CobW/HypB/UreG, nucleotide-binding domain TK90_0684 PF00450 Serine carboxypeptidase TK90_0685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TK90_0685 PF00581 Rhodanese-like domain TK90_0686 PF00174 Oxidoreductase molybdopterin binding domain TK90_0686 PF03404 Mo-co oxidoreductase dimerisation domain TK90_0687 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TK90_0688 PF01170 Putative RNA methylase family UPF0020 TK90_0688 PF02926 THUMP domain TK90_0688 PF10672 S-adenosylmethionine-dependent methyltransferase TK90_0689 PF01061 TK90_0689 TK90_0690 PF00005 ABC transporter TK90_0691 PF02635 DsrE/DsrF-like family TK90_0692 PF02635 DsrE/DsrF-like family TK90_0693 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TK90_0693 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TK90_0695 PF01464 Transglycosylase SLT domain TK90_0696 PF11583 P-aminobenzoate N-oxygenase AurF TK90_0697 PF08850 TK90_0697 TK90_0698 PF00117 Glutamine amidotransferase class-I TK90_0698 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TK90_0699 PF02142 MGS-like domain TK90_0699 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TK90_0699 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TK90_0700 PF01272 Transcription elongation factor, GreA/GreB, C-term TK90_0700 PF03449 Transcription elongation factor, N-terminal TK90_0701 PF01985 CRS1 / YhbY (CRM) domain TK90_0702 PF01728 FtsJ-like methyltransferase TK90_0703 PF00004 ATPase family associated with various cellular activities (AAA) TK90_0703 PF01434 Peptidase family M41 TK90_0703 PF06480 FtsH Extracellular TK90_0704 PF00809 Pterin binding enzyme TK90_0705 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TK90_0705 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TK90_0705 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TK90_0705 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TK90_0706 PF00121 Triosephosphate isomerase TK90_0707 PF03840 Preprotein translocase SecG subunit TK90_0708 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 TK90_0709 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TK90_0710 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit TK90_0711 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TK90_0712 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin TK90_0713 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TK90_0713 PF10531 SLBB domain TK90_0713 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TK90_0714 PF00384 Molybdopterin oxidoreductase TK90_0714 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TK90_0714 PF13510 2Fe-2S iron-sulfur cluster binding domain TK90_0715 PF00146 NADH dehydrogenase TK90_0716 PF12838 4Fe-4S dicluster domain TK90_0717 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TK90_0718 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TK90_0719 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains TK90_0719 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TK90_0720 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains TK90_0720 PF01059 TK90_0720 TK90_0721 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains TK90_0722 PF10993 TK90_0722 TK90_0723 PF02576 Uncharacterised BCR, YhbC family COG0779 TK90_0723 PF17384 TK90_0723 TK90_0724 PF00575 S1 RNA binding domain TK90_0724 PF08529 NusA N-terminal domain TK90_0724 PF13184 NusA-like KH domain TK90_0724 PF14520 Helix-hairpin-helix domain TK90_0725 PF00009 Elongation factor Tu GTP binding domain TK90_0725 PF04760 Translation initiation factor IF-2, N-terminal region TK90_0725 PF08364 TK90_0725 TK90_0725 PF11987 Translation-initiation factor 2 TK90_0726 PF02033 Ribosome-binding factor A TK90_0727 PF01509 TruB family pseudouridylate synthase (N terminal domain) TK90_0727 PF09157 Pseudouridine synthase II TruB, C-terminal TK90_0727 PF16198 TK90_0727 TK90_0728 PF00312 Ribosomal protein S15 TK90_0729 PF00013 KH domain TK90_0729 PF00575 S1 RNA binding domain TK90_0729 PF01138 3' exoribonuclease family, domain 1 TK90_0729 PF03725 3' exoribonuclease family, domain 2 TK90_0729 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TK90_0730 PF08241 Methyltransferase domain TK90_0731 PF00334 Nucleoside diphosphate kinase TK90_0732 PF04055 Radical SAM superfamily TK90_0733 PF13174 Tetratricopeptide repeat TK90_0733 PF14559 Tetratricopeptide repeat TK90_0734 PF13413 Helix-turn-helix domain TK90_0734 PF13464 TK90_0734 TK90_0735 PF03129 Anticodon binding domain TK90_0735 PF13393 Histidyl-tRNA synthetase TK90_0736 PF09976 Tetratricopeptide repeat TK90_0737 PF13360 PQQ-like domain TK90_0737 PF13570 PQQ-like domain TK90_0738 PF01926 50S ribosome-binding GTPase TK90_0738 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TK90_0739 PF00155 Aminotransferase class I and II TK90_0740 PF02690 TK90_0740 TK90_0741 PF00209 Sodium:neurotransmitter symporter family TK90_0742 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TK90_0742 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TK90_0742 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TK90_0742 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TK90_0743 PF06853 TK90_0743 TK90_0744 PF07977 FabA-like domain TK90_0747 PF08239 Bacterial SH3 domain TK90_0748 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains TK90_0748 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TK90_0748 PF13244 TK90_0748 TK90_0749 PF04039 TK90_0749 TK90_0750 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TK90_0751 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains TK90_0752 PF01899 TK90_0752 TK90_0753 PF04066 TK90_0753 TK90_0754 PF03334 TK90_0754 TK90_0756 PF00581 Rhodanese-like domain TK90_0756 PF01022 Bacterial regulatory protein, arsR family TK90_0757 PF00753 Metallo-beta-lactamase superfamily TK90_0758 PF07690 Major Facilitator Superfamily TK90_0760 PF00027 Cyclic nucleotide-binding domain TK90_0761 PF02698 DUF218 domain TK90_0763 PF07027 TK90_0763 TK90_0764 PF03631 TK90_0764 TK90_0765 PF04264 YceI-like domain TK90_0766 PF01066 CDP-alcohol phosphatidyltransferase TK90_0767 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TK90_0768 PF01242 6-pyruvoyl tetrahydropterin synthase TK90_0769 PF00534 Glycosyl transferases group 1 TK90_0769 PF13439 Glycosyltransferase Family 4 TK90_0774 PF00350 Dynamin family TK90_0776 PF13686 DsrE/DsrF/DrsH-like family TK90_0777 PF00248 Aldo/keto reductase family TK90_0779 PF05899 Protein of unknown function (DUF861) TK90_0780 PF13417 Glutathione S-transferase, N-terminal domain TK90_0781 PF01878 EVE domain TK90_0782 PF01812 5-formyltetrahydrofolate cyclo-ligase family TK90_0783 PF00248 Aldo/keto reductase family TK90_0784 PF00488 MutS domain V TK90_0785 PF09831 TK90_0785 TK90_0786 PF09523 TK90_0786 TK90_0787 PF00027 Cyclic nucleotide-binding domain TK90_0787 PF13545 Crp-like helix-turn-helix domain TK90_0788 PF02353 Mycolic acid cyclopropane synthetase TK90_0790 PF00593 TonB dependent receptor TK90_0790 PF07715 TonB-dependent Receptor Plug Domain TK90_0791 PF01923 Cobalamin adenosyltransferase TK90_0792 PF02514 TK90_0792 TK90_0793 PF01618 TK90_0793 TK90_0794 PF09919 TK90_0794 TK90_0795 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TK90_0795 PF12557 Cob(I)alamin adenosyltransferase N terminal TK90_0796 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TK90_0796 PF07685 CobB/CobQ-like glutamine amidotransferase domain TK90_0797 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TK90_0798 PF01888 CbiD TK90_0799 PF00005 ABC transporter TK90_0800 PF01061 TK90_0800 TK90_0801 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TK90_0802 PF02570 Precorrin-8X methylmutase TK90_0803 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TK90_0804 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TK90_0805 PF02571 TK90_0805 TK90_0806 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TK90_0806 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TK90_0807 PF01890 Cobalamin synthesis G C-terminus TK90_0808 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TK90_0809 PF01548 TK90_0809 TK90_0809 PF02371 TK90_0809 TK90_0810 PF01322 Cytochrome C' TK90_0811 PF07396 Phosphate-selective porin O and P TK90_0812 PF00034 Cytochrome c TK90_0812 PF03150 Di-haem cytochrome c peroxidase TK90_0813 PF14347 TK90_0813 TK90_0814 PF00749 tRNA synthetases class I (E and Q), catalytic domain TK90_0816 PF03704 Bacterial transcriptional activator domain TK90_0816 PF13191 AAA ATPase domain TK90_0820 PF00875 DNA photolyase TK90_0820 PF03441 FAD binding domain of DNA photolyase TK90_0821 PF04244 Deoxyribodipyrimidine photo-lyase-related protein TK90_0822 PF13411 MerR HTH family regulatory protein TK90_0823 PF03190 Protein of unknown function, DUF255 TK90_0824 PF00665 Integrase core domain TK90_0824 PF13276 TK90_0824 TK90_0825 PF01527 Transposase TK90_0826 PF00459 Inositol monophosphatase family TK90_0827 PF00588 SpoU rRNA Methylase family TK90_0828 PF00132 Bacterial transferase hexapeptide (six repeats) TK90_0829 PF02082 Transcriptional regulator TK90_0830 PF00266 Aminotransferase class-V TK90_0831 PF01592 NifU-like N terminal domain TK90_0832 PF01521 Iron-sulphur cluster biosynthesis TK90_0833 PF07743 HSCB C-terminal oligomerisation domain TK90_0834 PF00012 Hsp70 protein TK90_0835 PF00111 2Fe-2S iron-sulfur cluster binding domain TK90_0836 PF04384 Iron-sulphur cluster assembly TK90_0837 PF00005 ABC transporter TK90_0837 PF00664 ABC transporter transmembrane region TK90_0838 PF00990 GGDEF domain TK90_0838 PF13474 SnoaL-like domain TK90_0839 PF00270 DEAD/DEAH box helicase TK90_0839 PF00271 Helicase conserved C-terminal domain TK90_0839 PF00570 HRDC domain TK90_0839 PF09382 RQC domain TK90_0839 PF16124 TK90_0839 TK90_0840 PF12119 TK90_0840 TK90_0841 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) TK90_0843 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin TK90_0844 PF02525 Flavodoxin-like fold TK90_0845 PF05982 TK90_0845 TK90_0847 PF13563 2'-5' RNA ligase superfamily TK90_0848 PF00072 Response regulator receiver domain TK90_0848 PF00158 Sigma-54 interaction domain TK90_0849 PF00512 His Kinase A (phospho-acceptor) domain TK90_0849 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_0849 PF08448 PAS fold TK90_0851 PF00749 tRNA synthetases class I (E and Q), catalytic domain TK90_0852 PF01258 Prokaryotic dksA/traR C4-type zinc finger TK90_0853 PF13419 Haloacid dehalogenase-like hydrolase TK90_0854 PF01965 DJ-1/PfpI family TK90_0855 PF00440 Bacterial regulatory proteins, tetR family TK90_0856 PF16576 TK90_0856 TK90_0857 PF00873 AcrB/AcrD/AcrF family TK90_0858 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain TK90_0858 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain TK90_0859 PF00101 Ribulose bisphosphate carboxylase, small chain TK90_0860 PF12288 TK90_0860 TK90_0861 PF08936 Carboxysome Shell Carbonic Anhydrase TK90_0862 PF03319 Ethanolamine utilisation protein EutN/carboxysome TK90_0863 PF03319 Ethanolamine utilisation protein EutN/carboxysome TK90_0864 PF00936 BMC domain TK90_0865 PF00936 BMC domain TK90_0866 PF00936 BMC domain TK90_0867 PF00210 Ferritin-like domain TK90_0868 PF01329 Pterin 4 alpha carbinolamine dehydratase TK90_0869 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TK90_0871 PF07728 AAA domain (dynein-related subfamily) TK90_0871 PF08406 TK90_0871 TK90_0872 PF00092 von Willebrand factor type A domain TK90_0873 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TK90_0873 PF03466 LysR substrate binding domain TK90_0874 PF08332 Calcium/calmodulin dependent protein kinase II Association TK90_0876 PF02958 Ecdysteroid kinase TK90_0877 PF00005 ABC transporter TK90_0877 PF12848 ABC transporter TK90_0878 PF00543 Nitrogen regulatory protein P-II TK90_0879 PF10070 TK90_0879 TK90_0881 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains TK90_0881 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TK90_0882 PF00872 TK90_0882 TK90_0883 PF00122 E1-E2 ATPase TK90_0883 PF00689 Cation transporting ATPase, C-terminus TK90_0883 PF00690 Cation transporter/ATPase, N-terminus TK90_0883 PF00702 haloacid dehalogenase-like hydrolase TK90_0884 PF02537 TK90_0884 TK90_0885 PF02537 TK90_0885 TK90_0886 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TK90_0886 PF02403 Seryl-tRNA synthetase N-terminal domain TK90_0887 PF13098 Thioredoxin-like domain TK90_0889 PF01491 Frataxin-like domain TK90_0890 PF04241 TK90_0890 TK90_0893 PF04445 Putative SAM-dependent methyltransferase TK90_0894 PF04102 SlyX TK90_0895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TK90_0895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TK90_0896 PF01027 Inhibitor of apoptosis-promoting Bax1 TK90_0897 PF00916 TK90_0897 TK90_0897 PF01740 STAS domain TK90_0899 PF13489 Methyltransferase domain TK90_0900 PF04298 TK90_0900 TK90_0901 PF00924 Mechanosensitive ion channel TK90_0902 PF00912 Transglycosylase TK90_0904 PF04134 TK90_0904 TK90_0905 PF00300 Histidine phosphatase superfamily (branch 1) TK90_0906 PF13091 PLD-like domain TK90_0907 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TK90_0909 PF01636 Phosphotransferase enzyme family TK90_0910 PF09335 TK90_0910 TK90_0911 PF00753 Metallo-beta-lactamase superfamily TK90_0912 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TK90_0912 PF02824 TGS domain TK90_0912 PF03129 Anticodon binding domain TK90_0912 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TK90_0913 PF00707 Translation initiation factor IF-3, C-terminal domain TK90_0913 PF05198 Translation initiation factor IF-3, N-terminal domain TK90_0914 PF01632 Ribosomal protein L35 TK90_0915 PF00453 Ribosomal protein L20 TK90_0916 PF01409 tRNA synthetases class II core domain (F) TK90_0916 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TK90_0917 PF01588 Putative tRNA binding domain TK90_0917 PF03147 Ferredoxin-fold anticodon binding domain TK90_0917 PF03483 B3/4 domain TK90_0917 PF03484 tRNA synthetase B5 domain TK90_0918 PF00216 Bacterial DNA-binding protein TK90_0919 PF13411 MerR HTH family regulatory protein TK90_0920 PF07317 Flagellar regulator YcgR TK90_0921 PF05130 FlgN protein TK90_0922 PF04316 Anti-sigma-28 factor, FlgM TK90_0923 PF13144 SAF-like TK90_0924 PF00072 Response regulator receiver domain TK90_0924 PF01584 CheW-like domain TK90_0925 PF01739 CheR methyltransferase, SAM binding domain TK90_0925 PF03705 CheR methyltransferase, all-alpha domain TK90_0926 PF00460 Flagella basal body rod protein TK90_0927 PF00460 Flagella basal body rod protein TK90_0927 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TK90_0928 PF03963 TK90_0928 TK90_0928 PF13860 FlgD Ig-like domain TK90_0928 PF13861 FlgD Tudor-like domain TK90_0929 PF00460 Flagella basal body rod protein TK90_0929 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TK90_0929 PF07559 Flagellar basal body protein FlaE TK90_0930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TK90_0931 PF00460 Flagella basal body rod protein TK90_0931 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TK90_0932 PF02107 TK90_0932 TK90_0933 PF02119 TK90_0933 TK90_0934 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TK90_0934 PF10135 TK90_0934 TK90_0935 PF00460 Flagella basal body rod protein TK90_0935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TK90_0936 PF00669 Bacterial flagellin N-terminal helical region TK90_0936 PF00700 Bacterial flagellin C-terminal helical region TK90_0938 PF04402 Protein of unknown function (DUF541) TK90_0939 PF03781 Sulfatase-modifying factor enzyme 1 TK90_0939 PF12867 DinB superfamily TK90_0940 PF13230 Glutamine amidotransferases class-II TK90_0941 PF10017 TK90_0941 TK90_0942 PF00300 Histidine phosphatase superfamily (branch 1) TK90_0943 PF02541 Ppx/GppA phosphatase family TK90_0944 PF02503 Polyphosphate kinase middle domain TK90_0944 PF13089 Polyphosphate kinase N-terminal domain TK90_0944 PF13090 Polyphosphate kinase C-terminal domain TK90_0945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TK90_0945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TK90_0946 PF00202 Aminotransferase class-III TK90_0947 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TK90_0947 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TK90_0948 PF00939 Sodium:sulfate symporter transmembrane region TK90_0949 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TK90_0949 PF00672 HAMP domain TK90_0949 PF14827 Sensory domain of two-component sensor kinase TK90_0951 PF13417 Glutathione S-transferase, N-terminal domain TK90_0952 PF02635 DsrE/DsrF-like family TK90_0953 PF01895 PhoU domain TK90_0954 PF00005 ABC transporter TK90_0955 PF00528 Binding-protein-dependent transport system inner membrane component TK90_0956 PF00528 Binding-protein-dependent transport system inner membrane component TK90_0957 PF12849 PBP superfamily domain TK90_0958 PF00512 His Kinase A (phospho-acceptor) domain TK90_0958 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_0958 PF11808 TK90_0958 TK90_0958 PF13188 PAS domain TK90_0959 PF00072 Response regulator receiver domain TK90_0959 PF00486 Transcriptional regulatory protein, C terminal TK90_0960 PF12706 Beta-lactamase superfamily domain TK90_0961 PF02560 Cyanate lyase C-terminal domain TK90_0962 PF00005 ABC transporter TK90_0963 PF00528 Binding-protein-dependent transport system inner membrane component TK90_0964 PF13379 NMT1-like family TK90_0965 PF00158 Sigma-54 interaction domain TK90_0965 PF01590 GAF domain TK90_0965 PF02954 Bacterial regulatory protein, Fis family TK90_0966 PF00528 Binding-protein-dependent transport system inner membrane component TK90_0967 PF13379 NMT1-like family TK90_0968 PF00005 ABC transporter TK90_0969 PF02566 OsmC-like protein TK90_0970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TK90_0971 PF03625 Domain of unknown function DUF302 TK90_0972 PF00301 Rubredoxin TK90_0972 PF07992 Pyridine nucleotide-disulphide oxidoreductase TK90_0974 PF09413 Domain of unknown function (DUF2007) TK90_0975 PF01464 Transglycosylase SLT domain TK90_0975 PF13511 TK90_0975 TK90_0976 PF02237 Biotin protein ligase C terminal domain TK90_0976 PF03099 Biotin/lipoate A/B protein ligase family TK90_0977 PF03309 Type III pantothenate kinase TK90_0979 PF03190 Protein of unknown function, DUF255 TK90_0981 PF00872 TK90_0981 TK90_0983 PF00152 tRNA synthetases class II (D, K and N) TK90_0983 PF01336 OB-fold nucleic acid binding domain TK90_0984 PF13670 TK90_0984 TK90_0985 PF00916 TK90_0985 TK90_0985 PF01740 STAS domain TK90_0987 PF00512 His Kinase A (phospho-acceptor) domain TK90_0987 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_0988 PF00072 Response regulator receiver domain TK90_0988 PF00158 Sigma-54 interaction domain TK90_0988 PF02954 Bacterial regulatory protein, Fis family TK90_0989 PF07995 Glucose / Sorbosone dehydrogenase TK90_0990 PF03928 Domain of unknown function (DUF336) TK90_0991 PF04235 TK90_0991 TK90_0991 PF07786 TK90_0991 TK90_0993 PF11127 Protein of unknown function (DUF2892) TK90_0994 PF11127 Protein of unknown function (DUF2892) TK90_0995 PF00285 Citrate synthase TK90_0996 PF00990 GGDEF domain TK90_0997 PF01565 FAD binding domain TK90_0997 PF02913 FAD linked oxidases, C-terminal domain TK90_0998 PF00561 alpha/beta hydrolase fold TK90_0999 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains TK90_1000 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains TK90_1000 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TK90_1001 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains TK90_1002 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TK90_1003 PF04039 TK90_1003 TK90_1003 PF13244 TK90_1003 TK90_1004 PF03334 TK90_1004 TK90_1005 PF04066 TK90_1005 TK90_1006 PF01899 TK90_1006 TK90_1007 PF06776 Invasion associated locus B (IalB) protein TK90_1008 PF13231 TK90_1008 TK90_1009 PF12710 haloacid dehalogenase-like hydrolase TK90_1010 PF00106 short chain dehydrogenase TK90_1011 PF01565 FAD binding domain TK90_1012 PF03706 TK90_1012 TK90_1013 PF01040 UbiA prenyltransferase family TK90_1015 PF00892 EamA-like transporter family TK90_1017 PF00158 Sigma-54 interaction domain TK90_1017 PF02954 Bacterial regulatory protein, Fis family TK90_1020 PF03412 Peptidase C39 family TK90_1023 PF00037 4Fe-4S binding domain TK90_1023 PF11953 Domain of unknown function (DUF3470) TK90_1024 PF02732 ERCC4 domain TK90_1024 PF14520 Helix-hairpin-helix domain TK90_1025 PF03447 Homoserine dehydrogenase, NAD binding domain TK90_1026 PF00563 EAL domain TK90_1026 PF00990 GGDEF domain TK90_1026 PF08448 PAS fold TK90_1026 PF12729 TK90_1026 TK90_1027 PF00563 EAL domain TK90_1027 PF00989 PAS fold TK90_1027 PF00990 GGDEF domain TK90_1027 PF17159 TK90_1027 TK90_1028 PF00270 DEAD/DEAH box helicase TK90_1028 PF00271 Helicase conserved C-terminal domain TK90_1029 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TK90_1029 PF00672 HAMP domain TK90_1030 PF03960 ArsC family TK90_1031 PF00132 Bacterial transferase hexapeptide (six repeats) TK90_1031 PF14602 Hexapeptide repeat of succinyl-transferase TK90_1031 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal TK90_1032 PF00155 Aminotransferase class I and II TK90_1033 PF00753 Metallo-beta-lactamase superfamily TK90_1035 PF00581 Rhodanese-like domain TK90_1036 PF05013 N-formylglutamate amidohydrolase TK90_1037 PF01841 Transglutaminase-like superfamily TK90_1040 PF00535 Glycosyl transferase family 2 TK90_1041 PF00581 Rhodanese-like domain TK90_1043 PF00753 Metallo-beta-lactamase superfamily TK90_1044 PF05724 Thiopurine S-methyltransferase (TPMT) TK90_1045 PF13242 HAD-hyrolase-like TK90_1045 PF13344 Haloacid dehalogenase-like hydrolase TK90_1046 PF00270 DEAD/DEAH box helicase TK90_1046 PF00271 Helicase conserved C-terminal domain TK90_1046 PF03880 DbpA RNA binding domain TK90_1047 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TK90_1049 PF01548 TK90_1049 TK90_1049 PF02371 TK90_1049 TK90_1050 PF03588 Leucyl/phenylalanyl-tRNA protein transferase TK90_1052 PF02824 TGS domain TK90_1052 PF04607 Region found in RelA / SpoT proteins TK90_1052 PF13291 ACT domain TK90_1052 PF13328 HD domain TK90_1053 PF12146 Putative lysophospholipase TK90_1055 PF01209 ubiE/COQ5 methyltransferase family TK90_1056 PF02594 Uncharacterised ACR, YggU family COG1872 TK90_1057 PF01979 Amidohydrolase family TK90_1059 PF01661 Macro domain TK90_1060 PF04055 Radical SAM superfamily TK90_1062 PF00924 Mechanosensitive ion channel TK90_1063 PF03372 Endonuclease/Exonuclease/phosphatase family TK90_1064 PF02082 Transcriptional regulator TK90_1065 PF02673 TK90_1065 TK90_1066 PF02687 TK90_1066 TK90_1067 PF00005 ABC transporter TK90_1068 PF13472 GDSL-like Lipase/Acylhydrolase family TK90_1070 PF04982 TK90_1070 TK90_1071 PF00691 OmpA family TK90_1072 PF01618 TK90_1072 TK90_1073 PF04011 LemA family TK90_1074 PF01435 Peptidase family M48 TK90_1075 PF00989 PAS fold TK90_1075 PF00990 GGDEF domain TK90_1075 PF03924 CHASE domain TK90_1075 PF08448 PAS fold TK90_1076 PF01266 FAD dependent oxidoreductase TK90_1076 PF05430 S-adenosyl-L-methionine-dependent methyltransferase TK90_1077 PF01551 Peptidase family M23 TK90_1077 PF04225 Opacity-associated protein A LysM-like domain TK90_1078 PF01061 TK90_1078 TK90_1079 PF00005 ABC transporter TK90_1080 PF00883 Cytosol aminopeptidase family, catalytic domain TK90_1081 PF02633 Creatinine amidohydrolase TK90_1082 PF05050 Methyltransferase FkbM domain TK90_1083 PF04187 Protein of unknown function, DUF399 TK90_1083 PF13180 PDZ domain TK90_1084 PF01433 Peptidase family M1 TK90_1085 PF01230 HIT domain TK90_1086 PF03922 OmpW family TK90_1087 PF00106 short chain dehydrogenase TK90_1088 PF07556 TK90_1088 TK90_1090 PF00571 CBS domain TK90_1091 PF00989 PAS fold TK90_1091 PF00990 GGDEF domain TK90_1091 PF13426 PAS domain TK90_1093 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TK90_1093 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TK90_1093 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TK90_1093 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TK90_1094 PF00483 Nucleotidyl transferase TK90_1094 PF01050 Mannose-6-phosphate isomerase TK90_1095 PF02811 PHP domain TK90_1095 PF07733 Bacterial DNA polymerase III alpha subunit TK90_1095 PF14579 Helix-hairpin-helix motif TK90_1096 PF13489 Methyltransferase domain TK90_1097 PF00665 Integrase core domain TK90_1097 PF13276 TK90_1097 TK90_1098 PF01527 Transposase TK90_1099 PF00563 EAL domain TK90_1103 PF00589 Phage integrase family TK90_1104 PF01909 Nucleotidyltransferase domain TK90_1105 PF01381 Helix-turn-helix TK90_1107 PF02586 Uncharacterised ACR, COG2135 TK90_1108 PF05973 TK90_1108 TK90_1109 PF13744 Helix-turn-helix domain TK90_1110 PF01609 Transposase DDE domain TK90_1110 PF05598 TK90_1110 TK90_1111 PF11784 TK90_1111 TK90_1117 PF13505 Outer membrane protein beta-barrel domain TK90_1119 PF00990 GGDEF domain TK90_1119 PF08448 PAS fold TK90_1120 PF00004 ATPase family associated with various cellular activities (AAA) TK90_1122 PF13280 TK90_1122 TK90_1124 PF03923 TK90_1124 TK90_1128 PF08747 Domain of unknown function (DUF1788) TK90_1130 PF00872 TK90_1130 TK90_1131 PF04480 Protein of unknown function (DUF559) TK90_1132 PF02384 N-6 DNA Methylase TK90_1136 PF05362 Lon protease (S16) C-terminal proteolytic domain TK90_1136 PF13337 TK90_1136 TK90_1137 PF01527 Transposase TK90_1138 PF13276 TK90_1138 TK90_1138 PF13683 TK90_1138 TK90_1141 PF07514 Putative helicase TK90_1143 PF00589 Phage integrase family TK90_1143 PF12167 TK90_1143 TK90_1143 PF14659 Phage integrase, N-terminal SAM-like domain TK90_1146 PF13091 PLD-like domain TK90_1147 PF14534 Domain of unknown function (DUF4440) TK90_1148 PF06271 TK90_1148 TK90_1149 PF00274 Fructose-bisphosphate aldolase class-I TK90_1150 PF02872 5'-nucleotidase, C-terminal domain TK90_1151 PF01728 FtsJ-like methyltransferase TK90_1152 PF01894 Uncharacterised protein family UPF0047 TK90_1153 PF02769 AIR synthase related protein, C-terminal domain TK90_1153 PF13507 CobB/CobQ-like glutamine amidotransferase domain TK90_1154 PF16823 TK90_1154 TK90_1155 PF00158 Sigma-54 interaction domain TK90_1155 PF02954 Bacterial regulatory protein, Fis family TK90_1156 PF00158 Sigma-54 interaction domain TK90_1156 PF02954 Bacterial regulatory protein, Fis family TK90_1157 PF02049 TK90_1157 TK90_1158 PF01514 Secretory protein of YscJ/FliF family TK90_1158 PF08345 TK90_1158 TK90_1159 PF01706 FliG C-terminal domain TK90_1159 PF14841 FliG middle domain TK90_1159 PF14842 FliG N-terminal domain TK90_1160 PF02108 TK90_1160 TK90_1161 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TK90_1162 PF02050 Flagellar FliJ protein TK90_1163 PF02120 Flagellar hook-length control protein FliK TK90_1164 PF03748 TK90_1164 TK90_1165 PF01052 Surface presentation of antigens (SPOA) TK90_1165 PF02154 Flagellar motor switch protein FliM TK90_1166 PF01052 Surface presentation of antigens (SPOA) TK90_1167 PF04347 TK90_1167 TK90_1168 PF00813 TK90_1168 TK90_1169 PF01313 TK90_1169 TK90_1170 PF01311 TK90_1170 TK90_1171 PF01312 FlhB HrpN YscU SpaS Family TK90_1172 PF00771 FHIPEP family TK90_1173 PF00448 SRP54-type protein, GTPase domain TK90_1174 PF10609 ParA/MinD ATPase like TK90_1175 PF04539 Sigma-70 region 3 TK90_1175 PF04542 Sigma-70 region 2 TK90_1175 PF04545 Sigma-70, region 4 TK90_1176 PF00072 Response regulator receiver domain TK90_1177 PF04344 Chemotaxis phosphatase, CheZ TK90_1178 PF01584 CheW-like domain TK90_1178 PF01627 Hpt domain TK90_1178 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_1178 PF02895 Signal transducing histidine kinase, homodimeric domain TK90_1179 PF00072 Response regulator receiver domain TK90_1179 PF01339 CheB methylesterase TK90_1180 PF01618 TK90_1180 TK90_1181 PF00691 OmpA family TK90_1181 PF13677 TK90_1181 TK90_1182 PF13614 AAA domain TK90_1183 PF01584 CheW-like domain TK90_1184 PF01584 CheW-like domain TK90_1186 PF10975 TK90_1186 TK90_1187 PF01312 FlhB HrpN YscU SpaS Family TK90_1188 PF02120 Flagellar hook-length control protein FliK TK90_1189 PF01451 Low molecular weight phosphotyrosine protein phosphatase TK90_1190 PF00575 S1 RNA binding domain TK90_1190 PF10150 Ribonuclease E/G family TK90_1191 PF00849 RNA pseudouridylate synthase TK90_1191 PF01479 S4 domain TK90_1192 PF13419 Haloacid dehalogenase-like hydrolase TK90_1193 PF01343 Peptidase family S49 TK90_1194 PF10972 TK90_1194 TK90_1195 PF00270 DEAD/DEAH box helicase TK90_1195 PF00271 Helicase conserved C-terminal domain TK90_1195 PF02559 CarD-like/TRCF domain TK90_1195 PF03461 TRCF domain TK90_1196 PF00795 Carbon-nitrogen hydrolase TK90_1197 PF04371 Porphyromonas-type peptidyl-arginine deiminase TK90_1199 PF02687 TK90_1199 TK90_1199 PF12704 MacB-like periplasmic core domain TK90_1200 PF00005 ABC transporter TK90_1201 PF09835 TK90_1201 TK90_1202 PF00753 Metallo-beta-lactamase superfamily TK90_1202 PF03772 TK90_1202 TK90_1202 PF13567 TK90_1202 TK90_1203 PF01008 Initiation factor 2 subunit family TK90_1204 PF00521 DNA gyrase/topoisomerase IV, subunit A TK90_1204 PF03989 DNA gyrase C-terminal domain, beta-propeller TK90_1205 PF00266 Aminotransferase class-V TK90_1206 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TK90_1206 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TK90_1207 PF00800 Prephenate dehydratase TK90_1207 PF01817 Chorismate mutase type II TK90_1207 PF01842 ACT domain TK90_1208 PF00155 Aminotransferase class I and II TK90_1209 PF02153 Prephenate dehydrogenase TK90_1210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TK90_1211 PF02224 Cytidylate kinase TK90_1212 PF00575 S1 RNA binding domain TK90_1213 PF00216 Bacterial DNA-binding protein TK90_1214 PF06305 TK90_1214 TK90_1216 PF13432 Tetratricopeptide repeat TK90_1217 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TK90_1218 PF12836 Helix-hairpin-helix motif TK90_1219 PF00483 Nucleotidyl transferase TK90_1220 PF01694 Rhomboid family TK90_1221 PF00920 Dehydratase family TK90_1222 PF08755 Hemimethylated DNA-binding protein YccV like TK90_1223 PF00293 NUDIX domain TK90_1223 PF14803 Nudix N-terminal TK90_1224 PF00596 Class II Aldolase and Adducin N-terminal domain TK90_1225 PF01322 Cytochrome C' TK90_1226 PF00034 Cytochrome c TK90_1227 PF00589 Phage integrase family TK90_1227 PF13356 Domain of unknown function (DUF4102) TK90_1229 PF12728 Helix-turn-helix domain TK90_1232 PF00772 DnaB-like helicase N terminal domain TK90_1232 PF03796 DnaB-like helicase C terminal domain TK90_1238 PF07471 Phage DNA packaging protein Nu1 TK90_1241 PF00155 Aminotransferase class I and II TK90_1242 PF00271 Helicase conserved C-terminal domain TK90_1242 PF02151 UvrB/uvrC motif TK90_1242 PF04851 Type III restriction enzyme, res subunit TK90_1242 PF12344 Ultra-violet resistance protein B TK90_1243 PF00933 Glycosyl hydrolase family 3 N terminal domain TK90_1244 PF02635 DsrE/DsrF-like family TK90_1245 PF00156 Phosphoribosyl transferase domain TK90_1246 PF01048 Phosphorylase superfamily TK90_1248 PF00196 Bacterial regulatory proteins, luxR family TK90_1249 PF00202 Aminotransferase class-III TK90_1250 PF00266 Aminotransferase class-V TK90_1251 PF07238 PilZ domain TK90_1252 PF13177 DNA polymerase III, delta subunit TK90_1253 PF02223 Thymidylate kinase TK90_1254 PF02618 YceG-like family TK90_1255 PF01063 Aminotransferase class IV TK90_1256 PF00425 chorismate binding enzyme TK90_1256 PF04715 Anthranilate synthase component I, N terminal region TK90_1257 PF00109 Beta-ketoacyl synthase, N-terminal domain TK90_1257 PF02801 Beta-ketoacyl synthase, C-terminal domain TK90_1258 PF00550 Phosphopantetheine attachment site TK90_1259 PF13561 Enoyl-(Acyl carrier protein) reductase TK90_1260 PF00698 Acyl transferase domain TK90_1261 PF01176 Translation initiation factor 1A / IF-1 TK90_1262 PF00004 ATPase family associated with various cellular activities (AAA) TK90_1262 PF02861 Clp amino terminal domain TK90_1262 PF07724 AAA domain (Cdc48 subfamily) TK90_1262 PF10431 C-terminal, D2-small domain, of ClpB protein TK90_1263 PF02617 ATP-dependent Clp protease adaptor protein ClpS TK90_1264 PF00180 Isocitrate/isopropylmalate dehydrogenase TK90_1265 PF00293 NUDIX domain TK90_1266 PF03054 tRNA methyl transferase TK90_1267 PF04356 Protein of unknown function (DUF489) TK90_1268 PF00330 Aconitase family (aconitate hydratase) TK90_1268 PF00694 Aconitase C-terminal domain TK90_1270 PF08668 HDOD domain TK90_1271 PF00563 EAL domain TK90_1271 PF00990 GGDEF domain TK90_1272 PF00206 Lyase TK90_1272 PF10415 Fumarase C C-terminus TK90_1273 PF00206 Lyase TK90_1273 PF08328 Adenylosuccinate lyase C-terminal TK90_1274 PF08007 Cupin superfamily protein TK90_1275 PF01207 Dihydrouridine synthase (Dus) TK90_1277 PF00872 TK90_1277 TK90_1278 PF00925 GTP cyclohydrolase II TK90_1279 PF01872 RibD C-terminal domain TK90_1280 PF00291 Pyridoxal-phosphate dependent enzyme TK90_1281 PF00742 Homoserine dehydrogenase TK90_1281 PF01842 ACT domain TK90_1281 PF03447 Homoserine dehydrogenase, NAD binding domain TK90_1282 PF00155 Aminotransferase class I and II TK90_1283 PF04430 Protein of unknown function (DUF498/DUF598) TK90_1284 PF00140 Sigma-70 factor, region 1 TK90_1284 PF04539 Sigma-70 region 3 TK90_1284 PF04542 Sigma-70 region 2 TK90_1284 PF04545 Sigma-70, region 4 TK90_1285 PF01476 LysM domain TK90_1285 PF01551 Peptidase family M23 TK90_1286 PF09335 TK90_1286 TK90_1287 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TK90_1288 PF01975 Survival protein SurE TK90_1289 PF01713 Smr domain TK90_1290 PF11845 TK90_1290 TK90_1291 PF01610 TK90_1291 TK90_1291 PF13542 TK90_1291 TK90_1291 PF14690 TK90_1291 TK90_1292 PF13426 PAS domain TK90_1293 PF01142 tRNA pseudouridine synthase D (TruD) TK90_1294 PF00814 Glycoprotease family TK90_1295 PF00270 DEAD/DEAH box helicase TK90_1295 PF13307 Helicase C-terminal domain TK90_1296 PF14559 Tetratricopeptide repeat TK90_1297 PF00905 Penicillin binding protein transpeptidase domain TK90_1297 PF00912 Transglycosylase TK90_1297 PF14814 Bifunctional transglycosylase second domain TK90_1298 PF13671 AAA domain TK90_1300 PF00877 NlpC/P60 family TK90_1301 PF03625 Domain of unknown function DUF302 TK90_1302 PF02355 Protein export membrane protein TK90_1302 PF07549 SecD/SecF GG Motif TK90_1303 PF02355 Protein export membrane protein TK90_1303 PF07549 SecD/SecF GG Motif TK90_1303 PF13721 SecD export protein N-terminal TM region TK90_1304 PF02699 Preprotein translocase subunit TK90_1305 PF01702 Queuine tRNA-ribosyltransferase TK90_1306 PF02547 Queuosine biosynthesis protein TK90_1307 PF02321 Outer membrane efflux protein TK90_1308 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP TK90_1309 PF00563 EAL domain TK90_1309 PF00990 GGDEF domain TK90_1309 PF16448 TK90_1309 TK90_1310 PF00353 Hemolysin-type calcium-binding repeat (2 copies) TK90_1314 PF00196 Bacterial regulatory proteins, luxR family TK90_1315 PF13437 HlyD family secretion protein TK90_1315 PF13533 Biotin-lipoyl like TK90_1316 PF00005 ABC transporter TK90_1316 PF00664 ABC transporter transmembrane region TK90_1317 PF14437 TK90_1317 TK90_1318 PF00255 Glutathione peroxidase TK90_1319 PF03886 Protein of unknown function (DUF330) TK90_1320 PF02470 TK90_1320 TK90_1321 PF00005 ABC transporter TK90_1322 PF02405 TK90_1322 TK90_1322 PF13466 STAS domain TK90_1323 PF07726 ATPase family associated with various cellular activities (AAA) TK90_1324 PF01882 TK90_1324 TK90_1325 PF01841 Transglutaminase-like superfamily TK90_1325 PF11992 TK90_1325 TK90_1326 PF02082 Transcriptional regulator TK90_1327 PF03734 L,D-transpeptidase catalytic domain TK90_1328 PF00156 Phosphoribosyl transferase domain TK90_1328 PF13522 Glutamine amidotransferase domain TK90_1329 PF02674 TK90_1329 TK90_1330 PF05036 Sporulation related domain TK90_1331 PF08245 Mur ligase middle domain TK90_1332 PF01039 Carboxyl transferase domain TK90_1333 PF00290 Tryptophan synthase alpha chain TK90_1334 PF00291 Pyridoxal-phosphate dependent enzyme TK90_1336 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TK90_1337 PF01416 tRNA pseudouridine synthase TK90_1340 PF01118 Semialdehyde dehydrogenase, NAD binding domain TK90_1340 PF02774 Semialdehyde dehydrogenase, dimerisation domain TK90_1341 PF00180 Isocitrate/isopropylmalate dehydrogenase TK90_1342 PF00694 Aconitase C-terminal domain TK90_1343 PF00330 Aconitase family (aconitate hydratase) TK90_1344 PF13358 DDE superfamily endonuclease TK90_1344 PF13565 TK90_1344 TK90_1345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TK90_1345 PF03466 LysR substrate binding domain TK90_1346 PF07690 Major Facilitator Superfamily TK90_1347 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TK90_1347 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TK90_1348 PF03073 TspO/MBR family TK90_1349 PF16576 TK90_1349 TK90_1350 PF00873 AcrB/AcrD/AcrF family TK90_1351 PF02321 Outer membrane efflux protein TK90_1352 PF01061 TK90_1352 TK90_1353 PF00005 ABC transporter TK90_1353 PF13732 TK90_1353 TK90_1354 PF04073 Aminoacyl-tRNA editing domain TK90_1356 PF00990 GGDEF domain TK90_1357 PF00296 Luciferase-like monooxygenase TK90_1358 PF00291 Pyridoxal-phosphate dependent enzyme TK90_1359 PF01258 Prokaryotic dksA/traR C4-type zinc finger TK90_1360 PF00850 Histone deacetylase domain TK90_1361 PF02517 CAAX protease self-immunity TK90_1362 PF00175 Oxidoreductase NAD-binding domain TK90_1362 PF01794 TK90_1362 TK90_1362 PF08022 TK90_1362 TK90_1363 PF00173 Cytochrome b5-like Heme/Steroid binding domain TK90_1364 PF00069 Protein kinase domain TK90_1364 PF08668 HDOD domain TK90_1364 PF13492 GAF domain TK90_1365 PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) TK90_1366 PF00011 Hsp20/alpha crystallin family TK90_1367 PF01694 Rhomboid family TK90_1369 PF01112 Asparaginase TK90_1370 PF00962 Adenosine/AMP deaminase TK90_1371 PF01425 Amidase TK90_1372 PF00072 Response regulator receiver domain TK90_1372 PF00990 GGDEF domain TK90_1373 PF07700 Heme NO binding TK90_1375 PF00563 EAL domain TK90_1375 PF00990 GGDEF domain TK90_1376 PF13489 Methyltransferase domain TK90_1378 PF00437 Type II/IV secretion system protein TK90_1379 PF00107 Zinc-binding dehydrogenase TK90_1379 PF08240 Alcohol dehydrogenase GroES-like domain TK90_1380 PF00581 Rhodanese-like domain TK90_1380 PF02568 Thiamine biosynthesis protein (ThiI) TK90_1380 PF02926 THUMP domain TK90_1381 PF04463 TK90_1381 TK90_1381 PF08349 TK90_1381 TK90_1382 PF01734 Patatin-like phospholipase TK90_1383 PF00805 Pentapeptide repeats (8 copies) TK90_1386 PF00691 OmpA family TK90_1387 PF00990 GGDEF domain TK90_1388 PF00872 TK90_1388 TK90_1389 PF05239 PRC-barrel domain TK90_1390 PF13545 Crp-like helix-turn-helix domain TK90_1391 PF05532 CsbD-like TK90_1393 PF00665 Integrase core domain TK90_1393 PF13276 TK90_1393 TK90_1394 PF01527 Transposase TK90_1396 PF02652 TK90_1396 TK90_1398 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme TK90_1400 PF00669 Bacterial flagellin N-terminal helical region TK90_1400 PF00700 Bacterial flagellin C-terminal helical region TK90_1402 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TK90_1402 PF08447 PAS fold TK90_1403 PF00563 EAL domain TK90_1404 PF13767 TK90_1404 TK90_1405 PF13852 TK90_1405 TK90_1406 PF12697 Alpha/beta hydrolase family TK90_1407 PF00497 Bacterial extracellular solute-binding proteins, family 3 TK90_1408 PF01040 UbiA prenyltransferase family TK90_1408 PF02525 Flavodoxin-like fold TK90_1409 PF10604 Polyketide cyclase / dehydrase and lipid transport TK90_1410 PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) TK90_1412 PF00156 Phosphoribosyl transferase domain TK90_1413 PF00156 Phosphoribosyl transferase domain TK90_1414 PF01738 Dienelactone hydrolase family TK90_1415 PF10604 Polyketide cyclase / dehydrase and lipid transport TK90_1416 PF06983 3-demethylubiquinone-9 3-methyltransferase TK90_1419 PF03030 Inorganic H+ pyrophosphatase TK90_1420 PF01230 HIT domain TK90_1422 PF00034 Cytochrome c TK90_1425 PF00989 PAS fold TK90_1425 PF00990 GGDEF domain TK90_1425 PF01590 GAF domain TK90_1426 PF00990 GGDEF domain TK90_1427 PF00083 Sugar (and other) transporter TK90_1427 PF07690 Major Facilitator Superfamily TK90_1428 PF02517 CAAX protease self-immunity TK90_1429 PF01569 PAP2 superfamily TK90_1430 PF03992 Antibiotic biosynthesis monooxygenase TK90_1434 PF10387 Protein of unknown function (DUF2442) TK90_1435 PF13711 TK90_1435 TK90_1437 PF00872 TK90_1437 TK90_1440 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) TK90_1441 PF00268 Ribonucleotide reductase, small chain TK90_1442 PF00317 Ribonucleotide reductase, all-alpha domain TK90_1442 PF02867 Ribonucleotide reductase, barrel domain TK90_1442 PF03477 ATP cone domain TK90_1443 PF07992 Pyridine nucleotide-disulphide oxidoreductase TK90_1444 PF04339 TK90_1444 TK90_1445 PF05400 Flagellar protein FliT TK90_1446 PF02561 Flagellar protein FliS TK90_1447 PF02465 TK90_1447 TK90_1447 PF07195 TK90_1447 TK90_1447 PF07196 Flagellin hook IN motif TK90_1448 PF00669 Bacterial flagellin N-terminal helical region TK90_1448 PF00700 Bacterial flagellin C-terminal helical region TK90_1449 PF03646 FlaG protein TK90_1450 PF00669 Bacterial flagellin N-terminal helical region TK90_1450 PF00700 Bacterial flagellin C-terminal helical region TK90_1451 PF04893 TK90_1451 TK90_1452 PF02654 TK90_1452 TK90_1453 PF00300 Histidine phosphatase superfamily (branch 1) TK90_1454 PF02277 Phosphoribosyltransferase TK90_1455 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase TK90_1456 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TK90_1456 PF07685 CobB/CobQ-like glutamine amidotransferase domain TK90_1457 PF00155 Aminotransferase class I and II TK90_1458 PF03186 TK90_1458 TK90_1459 PF00881 Nitroreductase family TK90_1460 PF01497 Periplasmic binding protein TK90_1461 PF01032 FecCD transport family TK90_1462 PF00005 ABC transporter TK90_1464 PF02678 Pirin TK90_1464 PF05726 Pirin C-terminal cupin domain TK90_1465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TK90_1465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TK90_1466 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TK90_1467 PF02542 YgbB family TK90_1468 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TK90_1469 PF04977 Septum formation initiator TK90_1470 PF00113 Enolase, C-terminal TIM barrel domain TK90_1470 PF03952 Enolase, N-terminal domain TK90_1471 PF00793 DAHP synthetase I family TK90_1472 PF00117 Glutamine amidotransferase class-I TK90_1472 PF06418 CTP synthase N-terminus TK90_1473 PF07228 Stage II sporulation protein E (SpoIIE) TK90_1474 PF00990 GGDEF domain TK90_1475 PF09345 TK90_1475 TK90_1477 PF00497 Bacterial extracellular solute-binding proteins, family 3 TK90_1478 PF01171 PP-loop family TK90_1478 PF09179 TilS substrate binding domain TK90_1478 PF11734 TilS substrate C-terminal domain TK90_1479 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TK90_1480 PF01336 OB-fold nucleic acid binding domain TK90_1480 PF02811 PHP domain TK90_1480 PF07733 Bacterial DNA polymerase III alpha subunit TK90_1480 PF14579 Helix-hairpin-helix motif TK90_1481 PF01351 Ribonuclease HII TK90_1482 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TK90_1483 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TK90_1484 PF02684 TK90_1484 TK90_1485 PF00132 Bacterial transferase hexapeptide (six repeats) TK90_1485 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 TK90_1486 PF07977 FabA-like domain TK90_1487 PF00132 Bacterial transferase hexapeptide (six repeats) TK90_1487 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD TK90_1488 PF03938 Outer membrane protein (OmpH-like) TK90_1489 PF01103 Surface antigen TK90_1489 PF07244 Surface antigen variable number repeat TK90_1490 PF02163 Peptidase family M50 TK90_1490 PF13180 PDZ domain TK90_1491 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TK90_1491 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal TK90_1491 PF13288 DXP reductoisomerase C-terminal domain TK90_1492 PF01148 Cytidylyltransferase family TK90_1493 PF01255 Putative undecaprenyl diphosphate synthase TK90_1494 PF01765 Ribosome recycling factor TK90_1495 PF00696 Amino acid kinase family TK90_1496 PF00889 Elongation factor TS TK90_1497 PF00318 Ribosomal protein S2 TK90_1498 PF00557 Metallopeptidase family M24 TK90_1499 PF01909 Nucleotidyltransferase domain TK90_1499 PF01966 HD domain TK90_1499 PF08335 GlnD PII-uridylyltransferase TK90_1500 PF00691 OmpA family TK90_1502 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein TK90_1503 PF07681 TK90_1503 TK90_1504 PF00563 EAL domain TK90_1504 PF00672 HAMP domain TK90_1504 PF00989 PAS fold TK90_1504 PF00990 GGDEF domain TK90_1504 PF08447 PAS fold TK90_1505 PF03358 NADPH-dependent FMN reductase TK90_1506 PF01979 Amidohydrolase family TK90_1507 PF13489 Methyltransferase domain TK90_1508 PF13419 Haloacid dehalogenase-like hydrolase TK90_1509 PF02646 TK90_1509 TK90_1510 PF00494 Squalene/phytoene synthase TK90_1511 PF04055 Radical SAM superfamily TK90_1511 PF06969 HemN C-terminal domain TK90_1512 PF00494 Squalene/phytoene synthase TK90_1513 PF01593 Flavin containing amine oxidoreductase TK90_1514 PF00106 short chain dehydrogenase TK90_1515 PF04055 Radical SAM superfamily TK90_1515 PF08497 TK90_1515 TK90_1515 PF11842 TK90_1515 TK90_1516 PF00042 Globin TK90_1518 PF01645 Conserved region in glutamate synthase TK90_1518 PF09360 Iron-binding zinc finger CDGSH type TK90_1519 PF01243 Pyridoxamine 5'-phosphate oxidase TK90_1519 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region TK90_1521 PF03795 YCII-related domain TK90_1522 PF08327 Activator of Hsp90 ATPase homolog 1-like protein TK90_1523 PF00583 Acetyltransferase (GNAT) family TK90_1524 PF06983 3-demethylubiquinone-9 3-methyltransferase TK90_1525 PF07237 Protein of unknown function (DUF1428) TK90_1526 PF04542 Sigma-70 region 2 TK90_1527 PF02446 4-alpha-glucanotransferase TK90_1528 PF03065 Glycosyl hydrolase family 57 TK90_1529 PF00483 Nucleotidyl transferase TK90_1530 PF00128 Alpha amylase, catalytic domain TK90_1530 PF02806 Alpha amylase, C-terminal all-beta domain TK90_1530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TK90_1533 PF01850 PIN domain TK90_1535 PF04014 Antidote-toxin recognition MazE TK90_1536 PF00665 Integrase core domain TK90_1536 PF13276 TK90_1536 TK90_1537 PF01527 Transposase TK90_1538 PF13173 AAA domain TK90_1538 PF13635 TK90_1538 TK90_1539 PF02397 TK90_1539 TK90_1541 PF01381 Helix-turn-helix TK90_1542 PF01548 TK90_1542 TK90_1542 PF02371 TK90_1542 TK90_1543 PF01370 NAD dependent epimerase/dehydratase family TK90_1544 PF12686 TK90_1544 TK90_1545 PF00534 Glycosyl transferases group 1 TK90_1545 PF01370 NAD dependent epimerase/dehydratase family TK90_1546 PF00534 Glycosyl transferases group 1 TK90_1547 PF14897 TK90_1547 TK90_1548 PF00535 Glycosyl transferase family 2 TK90_1549 PF00535 Glycosyl transferase family 2 TK90_1550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TK90_1550 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TK90_1550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TK90_1552 PF01797 Transposase IS200 like TK90_1554 PF01797 Transposase IS200 like TK90_1556 PF01797 Transposase IS200 like TK90_1558 PF01797 Transposase IS200 like TK90_1561 PF01609 Transposase DDE domain TK90_1561 PF05598 TK90_1561 TK90_1562 PF13489 Methyltransferase domain TK90_1563 PF13440 TK90_1563 TK90_1564 PF01850 PIN domain TK90_1565 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TK90_1566 PF01850 PIN domain TK90_1567 PF04014 Antidote-toxin recognition MazE TK90_1569 PF05509 TK90_1569 TK90_1570 PF13412 Winged helix-turn-helix DNA-binding TK90_1571 PF02706 Chain length determinant protein TK90_1572 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TK90_1572 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TK90_1572 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TK90_1573 PF02719 Polysaccharide biosynthesis protein TK90_1573 PF13727 CoA-binding domain TK90_1574 PF01797 Transposase IS200 like TK90_1575 PF00533 BRCA1 C Terminus (BRCT) domain TK90_1575 PF01653 NAD-dependent DNA ligase adenylation domain TK90_1575 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TK90_1575 PF03120 NAD-dependent DNA ligase OB-fold domain TK90_1575 PF12826 Helix-hairpin-helix motif TK90_1575 PF14520 Helix-hairpin-helix domain TK90_1576 PF04354 ZipA, C-terminal FtsZ-binding domain TK90_1577 PF02463 RecF/RecN/SMC N terminal domain TK90_1578 PF14489 QueF-like protein TK90_1579 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TK90_1579 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TK90_1580 PF11381 TK90_1580 TK90_1581 PF07264 Etoposide-induced protein 2 TK90_1582 PF00497 Bacterial extracellular solute-binding proteins, family 3 TK90_1582 PF03458 TK90_1582 TK90_1583 PF09084 NMT1/THI5 like TK90_1584 PF00672 HAMP domain TK90_1584 PF02743 Cache domain TK90_1584 PF07228 Stage II sporulation protein E (SpoIIE) TK90_1585 PF07793 TK90_1585 TK90_1586 PF00355 Rieske [2Fe-2S] domain TK90_1588 PF01243 Pyridoxamine 5'-phosphate oxidase TK90_1589 PF02639 TK90_1589 TK90_1590 PF13396 TK90_1590 TK90_1591 PF10609 ParA/MinD ATPase like TK90_1592 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_1592 PF08668 HDOD domain TK90_1593 PF00072 Response regulator receiver domain TK90_1593 PF00563 EAL domain TK90_1593 PF00990 GGDEF domain TK90_1593 PF08448 PAS fold TK90_1594 PF00497 Bacterial extracellular solute-binding proteins, family 3 TK90_1594 PF00563 EAL domain TK90_1594 PF00990 GGDEF domain TK90_1595 PF02595 Glycerate kinase family TK90_1596 PF02447 TK90_1596 TK90_1597 PF01066 CDP-alcohol phosphatidyltransferase TK90_1598 PF01541 GIY-YIG catalytic domain TK90_1598 PF02151 UvrB/uvrC motif TK90_1598 PF08459 UvrC Helix-hairpin-helix N-terminal TK90_1598 PF14520 Helix-hairpin-helix domain TK90_1599 PF03167 Uracil DNA glycosylase superfamily TK90_1600 PF01928 CYTH domain TK90_1601 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TK90_1601 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TK90_1602 PF02504 Fatty acid synthesis protein TK90_1603 PF01783 Ribosomal L32p protein family TK90_1604 PF02620 TK90_1604 TK90_1605 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain TK90_1605 PF02785 Biotin carboxylase C-terminal domain TK90_1605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TK90_1606 PF00364 Biotin-requiring enzyme TK90_1606 PF00682 HMGL-like TK90_1606 PF02436 Conserved carboxylase domain TK90_1607 PF02545 Maf-like protein TK90_1608 PF01022 Bacterial regulatory protein, arsR family TK90_1609 PF12796 Ankyrin repeats (3 copies) TK90_1610 PF07732 Multicopper oxidase TK90_1611 PF07732 Multicopper oxidase TK90_1611 PF10518 TAT (twin-arginine translocation) pathway signal sequence TK90_1612 PF02599 Global regulator protein family TK90_1613 PF00696 Amino acid kinase family TK90_1613 PF01842 ACT domain TK90_1613 PF13840 ACT domain TK90_1614 PF01411 tRNA synthetases class II (A) TK90_1614 PF02272 DHHA1 domain TK90_1614 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TK90_1615 PF02631 RecX family TK90_1616 PF00154 recA bacterial DNA recombination protein TK90_1617 PF02464 Competence-damaged protein TK90_1618 PF07238 PilZ domain TK90_1619 PF00488 MutS domain V TK90_1619 PF01624 MutS domain I TK90_1619 PF05188 MutS domain II TK90_1619 PF05190 MutS family domain IV TK90_1619 PF05192 MutS domain III TK90_1620 PF02321 Outer membrane efflux protein TK90_1621 PF00873 AcrB/AcrD/AcrF family TK90_1622 PF16576 TK90_1622 TK90_1623 PF13538 UvrD-like helicase C-terminal domain TK90_1623 PF13604 AAA domain TK90_1624 PF00580 UvrD/REP helicase N-terminal domain TK90_1624 PF12705 PD-(D/E)XK nuclease superfamily TK90_1624 PF13361 UvrD-like helicase C-terminal domain TK90_1625 PF04257 Exodeoxyribonuclease V, gamma subunit TK90_1626 PF01773 Na+ dependent nucleoside transporter N-terminus TK90_1626 PF07662 Na+ dependent nucleoside transporter C-terminus TK90_1627 PF13531 Bacterial extracellular solute-binding protein TK90_1628 PF00528 Binding-protein-dependent transport system inner membrane component TK90_1629 PF00005 ABC transporter TK90_1631 PF00665 Integrase core domain TK90_1633 PF01381 Helix-turn-helix TK90_1634 PF02384 N-6 DNA Methylase TK90_1634 PF12161 HsdM N-terminal domain TK90_1635 PF01420 Type I restriction modification DNA specificity domain TK90_1636 PF02661 Fic/DOC family TK90_1636 PF13310 TK90_1636 TK90_1637 PF00271 Helicase conserved C-terminal domain TK90_1637 PF04851 Type III restriction enzyme, res subunit TK90_1637 PF08463 TK90_1637 TK90_1637 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) TK90_1639 PF13098 Thioredoxin-like domain TK90_1642 PF00224 Pyruvate kinase, barrel domain TK90_1642 PF02887 Pyruvate kinase, alpha/beta domain TK90_1643 PF01965 DJ-1/PfpI family TK90_1643 PF12833 Helix-turn-helix domain TK90_1644 PF02566 OsmC-like protein TK90_1645 PF02080 TrkA-C domain TK90_1645 PF03600 Citrate transporter TK90_1646 PF00326 Prolyl oligopeptidase family TK90_1646 PF07676 WD40-like Beta Propeller Repeat TK90_1647 PF00581 Rhodanese-like domain TK90_1648 PF01272 Transcription elongation factor, GreA/GreB, C-term TK90_1650 PF12823 TK90_1650 TK90_1651 PF03992 Antibiotic biosynthesis monooxygenase TK90_1652 PF00127 Copper binding proteins, plastocyanin/azurin family TK90_1652 PF07732 Multicopper oxidase TK90_1653 PF00665 Integrase core domain TK90_1653 PF13276 TK90_1653 TK90_1654 PF01527 Transposase TK90_1655 PF01741 Large-conductance mechanosensitive channel, MscL TK90_1656 PF00581 Rhodanese-like domain TK90_1656 PF00753 Metallo-beta-lactamase superfamily TK90_1658 PF00293 NUDIX domain TK90_1660 PF01786 Alternative oxidase TK90_1662 PF00440 Bacterial regulatory proteins, tetR family TK90_1663 PF00990 GGDEF domain TK90_1664 PF01169 TK90_1664 TK90_1665 PF10136 TK90_1665 TK90_1666 PF12146 Putative lysophospholipase TK90_1667 PF00563 EAL domain TK90_1667 PF00990 GGDEF domain TK90_1668 PF01844 HNH endonuclease TK90_1669 PF00583 Acetyltransferase (GNAT) family TK90_1670 PF10116 TK90_1670 TK90_1672 PF00300 Histidine phosphatase superfamily (branch 1) TK90_1674 PF00227 Proteasome subunit TK90_1675 PF04168 TK90_1675 TK90_1676 PF14403 TK90_1676 TK90_1678 PF04608 Phosphatidylglycerophosphatase A TK90_1679 PF00586 AIR synthase related protein, N-terminal domain TK90_1679 PF02769 AIR synthase related protein, C-terminal domain TK90_1680 PF01029 NusB family TK90_1681 PF00885 6,7-dimethyl-8-ribityllumazine synthase TK90_1682 PF01794 TK90_1682 TK90_1683 PF00174 Oxidoreductase molybdopterin binding domain TK90_1685 PF01797 Transposase IS200 like TK90_1686 PF07143 Hydroxyneurosporene synthase (CrtC) TK90_1686 PF17186 TK90_1686 TK90_1687 PF01548 TK90_1687 TK90_1687 PF02371 TK90_1687 TK90_1688 PF02687 TK90_1688 TK90_1688 PF12704 MacB-like periplasmic core domain TK90_1689 PF00005 ABC transporter TK90_1690 PF00571 CBS domain TK90_1690 PF01769 Divalent cation transporter TK90_1690 PF03448 MgtE intracellular N domain TK90_1691 PF00571 CBS domain TK90_1691 PF01769 Divalent cation transporter TK90_1691 PF03448 MgtE intracellular N domain TK90_1693 PF14384 TK90_1693 TK90_1695 PF13649 Methyltransferase domain TK90_1696 PF00520 Ion transport protein TK90_1698 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TK90_1699 PF01850 PIN domain TK90_1701 PF04365 Protein of unknown function (DUF497) TK90_1702 PF14384 TK90_1702 TK90_1703 PF01527 Transposase TK90_1704 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TK90_1705 PF01850 PIN domain TK90_1706 PF00520 Ion transport protein TK90_1707 PF01548 TK90_1707 TK90_1707 PF02371 TK90_1707 TK90_1708 PF00682 HMGL-like TK90_1708 PF08502 LeuA allosteric (dimerisation) domain TK90_1709 PF01037 AsnC family TK90_1709 PF13412 Winged helix-turn-helix DNA-binding TK90_1710 PF00950 TK90_1710 TK90_1711 PF00005 ABC transporter TK90_1712 PF01297 Periplasmic solute binding protein family TK90_1714 PF00989 PAS fold TK90_1714 PF08447 PAS fold TK90_1714 PF08448 PAS fold TK90_1714 PF13426 PAS domain TK90_1715 PF00990 GGDEF domain TK90_1715 PF08447 PAS fold TK90_1715 PF08448 PAS fold TK90_1715 PF13426 PAS domain TK90_1716 PF02347 Glycine cleavage system P-protein TK90_1717 PF08534 Redoxin TK90_1718 PF02347 Glycine cleavage system P-protein TK90_1719 PF01597 Glycine cleavage H-protein TK90_1720 PF01571 Aminomethyltransferase folate-binding domain TK90_1720 PF08669 Glycine cleavage T-protein C-terminal barrel domain TK90_1721 PF02535 TK90_1721 TK90_1722 PF01235 TK90_1722 TK90_1723 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TK90_1723 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TK90_1724 PF04079 Putative transcriptional regulators (Ypuh-like) TK90_1725 PF02616 ScpA/B protein TK90_1726 PF00579 tRNA synthetases class I (W and Y) TK90_1727 PF06097 TK90_1727 TK90_1728 PF01300 Telomere recombination TK90_1729 PF03795 YCII-related domain TK90_1730 PF13616 PPIC-type PPIASE domain TK90_1731 PF04314 Protein of unknown function (DUF461) TK90_1732 PF13437 HlyD family secretion protein TK90_1733 PF00873 AcrB/AcrD/AcrF family TK90_1735 PF00633 Helix-hairpin-helix motif TK90_1735 PF00730 HhH-GPD superfamily base excision DNA repair protein TK90_1735 PF10576 Iron-sulfur binding domain of endonuclease III TK90_1736 PF08897 TK90_1736 TK90_1738 PF10604 Polyketide cyclase / dehydrase and lipid transport TK90_1739 PF12832 MFS_1 like family TK90_1740 PF01264 Chorismate synthase TK90_1741 PF03928 Domain of unknown function (DUF336) TK90_1742 PF00581 Rhodanese-like domain TK90_1743 PF01272 Transcription elongation factor, GreA/GreB, C-term TK90_1743 PF14760 Rnk N-terminus TK90_1744 PF00581 Rhodanese-like domain TK90_1745 PF13192 Thioredoxin domain TK90_1746 PF01597 Glycine cleavage H-protein TK90_1748 PF01814 Hemerythrin HHE cation binding domain TK90_1749 PF01814 Hemerythrin HHE cation binding domain TK90_1749 PF10006 TK90_1749 TK90_1750 PF00497 Bacterial extracellular solute-binding proteins, family 3 TK90_1750 PF00990 GGDEF domain TK90_1750 PF01590 GAF domain TK90_1750 PF08447 PAS fold TK90_1750 PF13426 PAS domain TK90_1751 PF07690 Major Facilitator Superfamily TK90_1752 PF00730 HhH-GPD superfamily base excision DNA repair protein TK90_1753 PF00849 RNA pseudouridylate synthase TK90_1753 PF01479 S4 domain TK90_1754 PF00994 Probable molybdopterin binding domain TK90_1755 PF04343 TK90_1755 TK90_1756 PF00733 Asparagine synthase TK90_1756 PF13537 Glutamine amidotransferase domain TK90_1757 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TK90_1757 PF03466 LysR substrate binding domain TK90_1759 PF01343 Peptidase family S49 TK90_1759 PF08496 TK90_1759 TK90_1760 PF02635 DsrE/DsrF-like family TK90_1761 PF09459 Ethylbenzene dehydrogenase TK90_1762 PF01758 Sodium Bile acid symporter family TK90_1763 PF04055 Radical SAM superfamily TK90_1763 PF12345 TK90_1763 TK90_1764 PF03625 Domain of unknown function DUF302 TK90_1765 PF05618 Putative ATP-dependant zinc protease TK90_1766 PF08443 RimK-like ATP-grasp domain TK90_1767 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family TK90_1768 PF00578 AhpC/TSA family TK90_1770 PF01292 Prokaryotic cytochrome b561 TK90_1771 PF13419 Haloacid dehalogenase-like hydrolase TK90_1772 PF00472 RF-1 domain TK90_1774 PF00009 Elongation factor Tu GTP binding domain TK90_1774 PF03144 Elongation factor Tu domain 2 TK90_1774 PF16658 TK90_1774 TK90_1775 PF08238 Sel1 repeat TK90_1776 PF00583 Acetyltransferase (GNAT) family TK90_1777 PF03167 Uracil DNA glycosylase superfamily TK90_1778 PF01066 CDP-alcohol phosphatidyltransferase TK90_1780 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TK90_1780 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain TK90_1781 PF10369 Small subunit of acetolactate synthase TK90_1781 PF13710 ACT domain TK90_1782 PF00205 Thiamine pyrophosphate enzyme, central domain TK90_1782 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TK90_1782 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TK90_1784 PF00696 Amino acid kinase family TK90_1785 PF00692 dUTPase TK90_1786 PF01883 Domain of unknown function DUF59 TK90_1786 PF10609 ParA/MinD ATPase like TK90_1787 PF01588 Putative tRNA binding domain TK90_1787 PF09334 tRNA synthetases class I (M) TK90_1788 PF00596 Class II Aldolase and Adducin N-terminal domain TK90_1790 PF02508 TK90_1790 TK90_1791 PF04060 Putative Fe-S cluster TK90_1791 PF14697 4Fe-4S dicluster domain TK90_1792 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TK90_1792 PF10531 SLBB domain TK90_1792 PF13237 4Fe-4S dicluster domain TK90_1792 PF13375 RnfC Barrel sandwich hybrid domain TK90_1793 PF03116 TK90_1793 TK90_1794 PF04205 FMN-binding domain TK90_1795 PF02508 TK90_1795 TK90_1796 PF14070 TK90_1796 TK90_1797 PF08241 Methyltransferase domain TK90_1798 PF00860 Permease family TK90_1798 PF13581 Histidine kinase-like ATPase domain TK90_1799 PF01227 GTP cyclohydrolase I TK90_1800 PF11911 TK90_1800 TK90_1801 PF00255 Glutathione peroxidase TK90_1802 PF01593 Flavin containing amine oxidoreductase TK90_1803 PF07103 TK90_1803 TK90_1804 PF02353 Mycolic acid cyclopropane synthetase TK90_1805 PF13673 Acetyltransferase (GNAT) domain TK90_1806 PF01909 Nucleotidyltransferase domain TK90_1810 PF00872 TK90_1810 TK90_1811 PF01797 Transposase IS200 like TK90_1812 PF01797 Transposase IS200 like TK90_1813 PF01797 Transposase IS200 like TK90_1814 PF13609 Gram-negative porin TK90_1815 PF01850 PIN domain TK90_1816 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TK90_1819 PF01494 FAD binding domain TK90_1820 PF01494 FAD binding domain TK90_1821 PF00557 Metallopeptidase family M24 TK90_1821 PF05195 Aminopeptidase P, N-terminal domain TK90_1822 PF03695 Uncharacterised protein family (UPF0149) TK90_1824 PF06005 Protein of unknown function (DUF904) TK90_1825 PF05164 Cell division protein ZapA TK90_1826 PF03548 Outer membrane lipoprotein carrier protein LolA TK90_1827 PF01580 FtsK/SpoIIIE family TK90_1827 PF09397 Ftsk gamma domain TK90_1827 PF13491 TK90_1827 TK90_1828 PF08241 Methyltransferase domain TK90_1831 PF00999 Sodium/hydrogen exchanger family TK90_1832 PF00717 Peptidase S24-like TK90_1832 PF01726 LexA DNA binding domain TK90_1834 PF00817 impB/mucB/samB family TK90_1835 PF01370 NAD dependent epimerase/dehydratase family TK90_1836 PF03776 Septum formation topological specificity factor MinE TK90_1837 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TK90_1838 PF03775 Septum formation inhibitor MinC, C-terminal domain TK90_1838 PF05209 Septum formation inhibitor MinC, N-terminal domain TK90_1839 PF06966 TK90_1839 TK90_1840 PF02353 Mycolic acid cyclopropane synthetase TK90_1841 PF01968 Hydantoinase/oxoprolinase TK90_1841 PF02538 TK90_1841 TK90_1841 PF05378 TK90_1841 TK90_1842 PF04307 TK90_1842 TK90_1844 PF01113 Dihydrodipicolinate reductase, N-terminus TK90_1844 PF05173 Dihydrodipicolinate reductase, C-terminus TK90_1845 PF05175 Methyltransferase small domain TK90_1846 PF02666 TK90_1846 TK90_1847 PF00929 Exonuclease TK90_1848 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TK90_1849 PF01329 Pterin 4 alpha carbinolamine dehydratase TK90_1850 PF03193 Protein of unknown function, DUF258 TK90_1852 PF01230 HIT domain TK90_1853 PF02132 RecR protein TK90_1853 PF13662 Toprim domain TK90_1854 PF02575 YbaB/EbfC DNA-binding family TK90_1855 PF12169 DNA polymerase III subunits gamma and tau domain III TK90_1855 PF12170 DNA polymerase III tau subunit V interacting with alpha TK90_1855 PF13177 DNA polymerase III, delta subunit TK90_1856 PF00462 Glutaredoxin TK90_1856 PF08534 Redoxin TK90_1857 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TK90_1857 PF07992 Pyridine nucleotide-disulphide oxidoreductase TK90_1858 PF13505 Outer membrane protein beta-barrel domain TK90_1860 PF05532 CsbD-like TK90_1861 PF07043 TK90_1861 TK90_1862 PF00027 Cyclic nucleotide-binding domain TK90_1862 PF13545 Crp-like helix-turn-helix domain TK90_1863 PF00027 Cyclic nucleotide-binding domain TK90_1863 PF00571 CBS domain TK90_1863 PF03445 TK90_1863 TK90_1863 PF10335 TK90_1863 TK90_1864 PF13937 TK90_1864 TK90_1865 PF00474 Sodium:solute symporter family TK90_1866 PF00571 CBS domain TK90_1866 PF03445 TK90_1866 TK90_1866 PF10335 TK90_1866 TK90_1867 PF00929 Exonuclease TK90_1868 PF00501 AMP-binding enzyme TK90_1868 PF13193 AMP-binding enzyme C-terminal domain TK90_1868 PF16177 TK90_1868 TK90_1869 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TK90_1870 PF00563 EAL domain TK90_1870 PF00990 GGDEF domain TK90_1870 PF13426 PAS domain TK90_1873 PF01740 STAS domain TK90_1874 PF13581 Histidine kinase-like ATPase domain TK90_1875 PF01106 NifU-like domain TK90_1876 PF03937 Flavinator of succinate dehydrogenase TK90_1877 PF13085 2Fe-2S iron-sulfur cluster binding domain TK90_1877 PF13183 4Fe-4S dicluster domain TK90_1878 PF00890 FAD binding domain TK90_1878 PF02910 Fumarate reductase flavoprotein C-term TK90_1879 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TK90_1880 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TK90_1881 PF01571 Aminomethyltransferase folate-binding domain TK90_1881 PF08669 Glycine cleavage T-protein C-terminal barrel domain TK90_1883 PF00925 GTP cyclohydrolase II TK90_1883 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TK90_1884 PF00677 Lumazine binding domain TK90_1885 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TK90_1885 PF01872 RibD C-terminal domain TK90_1886 PF03477 ATP cone domain TK90_1887 PF00464 Serine hydroxymethyltransferase TK90_1888 PF07589 TK90_1888 TK90_1889 PF07589 TK90_1889 TK90_1890 PF16868 TK90_1890 TK90_1891 PF06808 TK90_1891 TK90_1891 PF11874 TK90_1891 TK90_1892 PF03625 Domain of unknown function DUF302 TK90_1893 PF01565 FAD binding domain TK90_1894 PF02754 TK90_1894 TK90_1894 PF13183 4Fe-4S dicluster domain TK90_1895 PF00266 Aminotransferase class-V TK90_1897 PF01569 PAP2 superfamily TK90_1898 PF13439 Glycosyltransferase Family 4 TK90_1898 PF13692 Glycosyl transferases group 1 TK90_1899 PF01553 Acyltransferase TK90_1900 PF13444 Acetyltransferase (GNAT) domain TK90_1901 PF00581 Rhodanese-like domain TK90_1902 PF03190 Protein of unknown function, DUF255 TK90_1902 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) TK90_1903 PF01790 TK90_1903 TK90_1904 PF00303 Thymidylate synthase TK90_1905 PF00186 Dihydrofolate reductase TK90_1906 PF07521 RNA-metabolising metallo-beta-lactamase TK90_1906 PF10996 Beta-Casp domain TK90_1906 PF16661 TK90_1906 TK90_1907 PF02690 TK90_1907 TK90_1908 PF09414 RNA ligase TK90_1909 PF08745 UPF0278 family TK90_1910 PF08668 HDOD domain TK90_1911 PF04940 Sensors of blue-light using FAD TK90_1912 PF00117 Glutamine amidotransferase class-I TK90_1912 PF00958 GMP synthase C terminal domain TK90_1912 PF02540 NAD synthase TK90_1913 PF00478 IMP dehydrogenase / GMP reductase domain TK90_1913 PF00571 CBS domain TK90_1914 PF13852 TK90_1914 TK90_1915 PF02601 TK90_1915 TK90_1915 PF13742 TK90_1915 TK90_1916 PF00749 tRNA synthetases class I (E and Q), catalytic domain TK90_1917 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TK90_1918 PF00149 Calcineurin-like phosphoesterase TK90_1919 PF02321 Outer membrane efflux protein TK90_1920 PF00873 AcrB/AcrD/AcrF family TK90_1921 PF16576 TK90_1921 TK90_1922 PF00440 Bacterial regulatory proteins, tetR family TK90_1923 PF04305 TK90_1923 TK90_1924 PF07731 Multicopper oxidase TK90_1924 PF07732 Multicopper oxidase TK90_1925 PF00122 E1-E2 ATPase TK90_1925 PF00403 Heavy-metal-associated domain TK90_1925 PF00702 haloacid dehalogenase-like hydrolase TK90_1928 PF13091 PLD-like domain TK90_1929 PF01053 Cys/Met metabolism PLP-dependent enzyme TK90_1930 PF00842 Alanine racemase, C-terminal domain TK90_1930 PF01168 Alanine racemase, N-terminal domain TK90_1931 PF00772 DnaB-like helicase N terminal domain TK90_1931 PF03796 DnaB-like helicase C terminal domain TK90_1932 PF01281 Ribosomal protein L9, N-terminal domain TK90_1932 PF03948 Ribosomal protein L9, C-terminal domain TK90_1933 PF09991 TK90_1933 TK90_1934 PF01084 Ribosomal protein S18 TK90_1935 PF01250 Ribosomal protein S6 TK90_1936 PF00034 Cytochrome c TK90_1937 PF00588 SpoU rRNA Methylase family TK90_1937 PF08032 RNA 2'-O ribose methyltransferase substrate binding TK90_1938 PF00575 S1 RNA binding domain TK90_1938 PF00773 RNB domain TK90_1938 PF08206 Ribonuclease B OB domain TK90_1938 PF08461 Ribonuclease R winged-helix domain TK90_1939 PF00709 Adenylosuccinate synthetase TK90_1940 PF13393 Histidyl-tRNA synthetase TK90_1941 PF01145 SPFH domain / Band 7 family TK90_1942 PF01145 SPFH domain / Band 7 family TK90_1942 PF12221 TK90_1942 TK90_1943 PF01648 4'-phosphopantetheinyl transferase superfamily TK90_1944 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ TK90_1945 PF02565 Recombination protein O C terminal TK90_1945 PF11967 Recombination protein O N terminal TK90_1946 PF01926 50S ribosome-binding GTPase TK90_1946 PF07650 KH domain TK90_1947 PF00035 Double-stranded RNA binding motif TK90_1947 PF14622 Ribonuclease-III-like TK90_1948 PF16137 TK90_1948 TK90_1949 PF00717 Peptidase S24-like TK90_1950 PF00009 Elongation factor Tu GTP binding domain TK90_1950 PF00679 Elongation factor G C-terminus TK90_1950 PF03144 Elongation factor Tu domain 2 TK90_1950 PF06421 GTP-binding protein LepA C-terminus TK90_1951 PF05768 Glutaredoxin-like domain (DUF836) TK90_1952 PF13180 PDZ domain TK90_1952 PF13365 Trypsin-like peptidase domain TK90_1953 PF04246 TK90_1953 TK90_1954 PF03888 MucB/RseB family TK90_1954 PF17188 TK90_1954 TK90_1955 PF03872 Anti sigma-E protein RseA, N-terminal domain TK90_1956 PF04542 Sigma-70 region 2 TK90_1956 PF08281 Sigma-70, region 4 TK90_1957 PF00890 FAD binding domain TK90_1957 PF02910 Fumarate reductase flavoprotein C-term TK90_1958 PF00175 Oxidoreductase NAD-binding domain TK90_1958 PF00970 Oxidoreductase FAD-binding domain TK90_1959 PF03819 MazG nucleotide pyrophosphohydrolase domain TK90_1960 PF00753 Metallo-beta-lactamase superfamily TK90_1961 PF01722 BolA-like protein TK90_1964 PF08668 HDOD domain TK90_1965 PF08668 HDOD domain TK90_1966 PF04055 Radical SAM superfamily TK90_1967 PF03099 Biotin/lipoate A/B protein ligase family TK90_1968 PF04359 Protein of unknown function (DUF493) TK90_1969 PF01063 Aminotransferase class IV TK90_1970 PF00768 D-alanyl-D-alanine carboxypeptidase TK90_1970 PF07943 Penicillin-binding protein 5, C-terminal domain TK90_1971 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel TK90_1971 PF05036 Sporulation related domain TK90_1972 PF13406 Transglycosylase SLT domain TK90_1973 PF01098 TK90_1973 TK90_1974 PF00905 Penicillin binding protein transpeptidase domain TK90_1974 PF03717 Penicillin-binding Protein dimerisation domain TK90_1975 PF00719 Inorganic pyrophosphatase TK90_1976 PF00406 Adenylate kinase TK90_1976 PF05191 Adenylate kinase, active site lid TK90_1977 PF04453 Organic solvent tolerance protein TK90_1978 PF00639 PPIC-type PPIASE domain TK90_1978 PF09312 SurA N-terminal domain TK90_1978 PF13616 PPIC-type PPIASE domain TK90_1979 PF04166 Pyridoxal phosphate biosynthetic protein PdxA TK90_1980 PF00398 Ribosomal RNA adenine dimethylase TK90_1981 PF02685 Glucokinase TK90_1982 PF04379 Protein of unknown function (DUF525) TK90_1983 PF00149 Calcineurin-like phosphoesterase TK90_1984 PF01523 Putative modulator of DNA gyrase TK90_1986 PF01523 Putative modulator of DNA gyrase TK90_1987 PF00795 Carbon-nitrogen hydrolase TK90_1988 PF13116 TK90_1988 TK90_1988 PF13502 TK90_1988 TK90_1989 PF00575 S1 RNA binding domain TK90_1989 PF10150 Ribonuclease E/G family TK90_1990 PF01594 TK90_1990 TK90_1993 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TK90_1993 PF03466 LysR substrate binding domain TK90_1994 PF00563 EAL domain TK90_1994 PF00990 GGDEF domain TK90_1995 PF00830 Ribosomal L28 family TK90_1996 PF00471 Ribosomal protein L33 TK90_1998 PF00563 EAL domain TK90_1998 PF08668 HDOD domain TK90_2000 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain TK90_2000 PF06827 Zinc finger found in FPG and IleRS TK90_2000 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain TK90_2001 PF02824 TGS domain TK90_2001 PF04607 Region found in RelA / SpoT proteins TK90_2001 PF13291 ACT domain TK90_2001 PF13328 HD domain TK90_2002 PF01192 RNA polymerase Rpb6 TK90_2003 PF00625 Guanylate kinase TK90_2004 PF00348 Polyprenyl synthetase TK90_2005 PF00829 Ribosomal prokaryotic L21 protein TK90_2006 PF01016 Ribosomal L27 protein TK90_2007 PF01018 GTP1/OBG TK90_2007 PF01926 50S ribosome-binding GTPase TK90_2008 PF00696 Amino acid kinase family TK90_2008 PF01472 PUA domain TK90_2009 PF01042 Endoribonuclease L-PSP TK90_2010 PF00270 DEAD/DEAH box helicase TK90_2010 PF00271 Helicase conserved C-terminal domain TK90_2010 PF17191 TK90_2010 TK90_2011 PF04226 TK90_2011 TK90_2012 PF11381 TK90_2012 TK90_2013 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) TK90_2014 PF00413 Matrixin TK90_2015 PF12276 TK90_2015 TK90_2016 PF01330 RuvA N terminal domain TK90_2016 PF07499 RuvA, C-terminal domain TK90_2016 PF14520 Helix-hairpin-helix domain TK90_2017 PF02075 Crossover junction endodeoxyribonuclease RuvC TK90_2018 PF01709 Transcriptional regulator TK90_2019 PF01965 DJ-1/PfpI family TK90_2020 PF03572 Peptidase family S41 TK90_2020 PF13180 PDZ domain TK90_2021 PF01551 Peptidase family M23 TK90_2022 PF01022 Bacterial regulatory protein, arsR family TK90_2023 PF00581 Rhodanese-like domain TK90_2024 PF00462 Glutaredoxin TK90_2025 PF02556 Preprotein translocase subunit SecB TK90_2026 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TK90_2026 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TK90_2029 PF02028 BCCT family transporter TK90_2030 PF10005 TK90_2030 TK90_2030 PF15887 TK90_2030 TK90_2031 PF02450 Lecithin:cholesterol acyltransferase TK90_2032 PF00004 ATPase family associated with various cellular activities (AAA) TK90_2032 PF02861 Clp amino terminal domain TK90_2032 PF07724 AAA domain (Cdc48 subfamily) TK90_2032 PF10431 C-terminal, D2-small domain, of ClpB protein TK90_2033 PF02578 Multi-copper polyphenol oxidoreductase laccase TK90_2034 PF00849 RNA pseudouridylate synthase TK90_2034 PF01479 S4 domain TK90_2035 PF13525 Outer membrane lipoprotein TK90_2036 PF00543 Nitrogen regulatory protein P-II TK90_2037 PF01548 TK90_2037 TK90_2037 PF02371 TK90_2037 TK90_2038 PF00795 Carbon-nitrogen hydrolase TK90_2038 PF02540 NAD synthase TK90_2039 PF00549 CoA-ligase TK90_2039 PF02629 CoA binding domain TK90_2040 PF00549 CoA-ligase TK90_2040 PF08442 ATP-grasp domain TK90_2041 PF02261 Aspartate decarboxylase TK90_2042 PF02569 Pantoate-beta-alanine ligase TK90_2043 PF02548 Ketopantoate hydroxymethyltransferase TK90_2044 PF01712 Deoxynucleoside kinase TK90_2045 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TK90_2046 PF01743 Poly A polymerase head domain TK90_2046 PF12626 Polymerase A arginine-rich C-terminus TK90_2046 PF12627 Probable RNA and SrmB- binding site of polymerase A TK90_2047 PF00293 NUDIX domain TK90_2048 PF01479 S4 domain TK90_2049 PF13410 Glutathione S-transferase, C-terminal domain TK90_2049 PF13417 Glutathione S-transferase, N-terminal domain TK90_2050 PF01475 Ferric uptake regulator family TK90_2051 PF04355 SmpA / OmlA family TK90_2052 PF03658 RnfH family Ubiquitin TK90_2053 PF03364 Polyketide cyclase / dehydrase and lipid transport TK90_2054 PF00209 Sodium:neurotransmitter symporter family TK90_2055 PF01668 SmpB protein TK90_2057 PF07332 TK90_2057 TK90_2058 PF05957 TK90_2058 TK90_2059 PF01594 TK90_2059 TK90_2061 PF00271 Helicase conserved C-terminal domain TK90_2061 PF04408 Helicase associated domain (HA2) TK90_2061 PF08482 TK90_2061 TK90_2062 PF02321 Outer membrane efflux protein TK90_2062 PF13437 HlyD family secretion protein TK90_2063 PF02687 TK90_2063 TK90_2063 PF12704 MacB-like periplasmic core domain TK90_2064 PF00005 ABC transporter TK90_2066 PF01548 TK90_2066 TK90_2066 PF02371 TK90_2066 TK90_2067 PF00294 pfkB family carbohydrate kinase TK90_2068 PF01548 TK90_2068 TK90_2068 PF02371 TK90_2068 TK90_2069 PF01161 Phosphatidylethanolamine-binding protein TK90_2071 PF01734 Patatin-like phospholipase TK90_2072 PF01713 Smr domain TK90_2073 PF00582 Universal stress protein family TK90_2074 PF01544 CorA-like Mg2+ transporter protein TK90_2075 PF00141 Peroxidase TK90_2076 PF12321 TK90_2076 TK90_2079 PF01914 TK90_2079 TK90_2081 PF11216 TK90_2081 TK90_2082 PF01243 Pyridoxamine 5'-phosphate oxidase TK90_2083 PF13561 Enoyl-(Acyl carrier protein) reductase TK90_2084 PF12643 TK90_2084 TK90_2085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TK90_2085 PF03466 LysR substrate binding domain TK90_2086 PF07681 TK90_2086 TK90_2088 PF03358 NADPH-dependent FMN reductase TK90_2089 PF02678 Pirin TK90_2089 PF05726 Pirin C-terminal cupin domain TK90_2090 PF08808 TK90_2090 TK90_2091 PF09722 TK90_2091 TK90_2092 PF01435 Peptidase family M48 TK90_2093 PF12321 TK90_2093 TK90_2094 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TK90_2096 PF02321 Outer membrane efflux protein TK90_2097 PF16576 TK90_2097 TK90_2098 PF00873 AcrB/AcrD/AcrF family TK90_2100 PF05016 Plasmid stabilisation system protein TK90_2101 PF00204 DNA gyrase B TK90_2101 PF00986 DNA gyrase B subunit, carboxyl terminus TK90_2101 PF01751 Toprim domain TK90_2101 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_2102 PF00085 Thioredoxin TK90_2102 PF14559 Tetratricopeptide repeat TK90_2102 PF14561 Tetratricopeptide repeat TK90_2103 PF10411 Disulfide bond isomerase protein N-terminus TK90_2103 PF13098 Thioredoxin-like domain TK90_2104 PF00589 Phage integrase family TK90_2104 PF02899 Phage integrase, N-terminal SAM-like domain TK90_2105 PF01145 SPFH domain / Band 7 family TK90_2106 PF01957 NfeD-like C-terminal, partner-binding TK90_2107 PF12804 MobA-like NTP transferase domain TK90_2108 PF03205 Molybdopterin guanine dinucleotide synthesis protein B TK90_2109 PF00994 Probable molybdopterin binding domain TK90_2109 PF03453 MoeA N-terminal region (domain I and II) TK90_2109 PF03454 MoeA C-terminal region (domain IV) TK90_2110 PF07238 PilZ domain TK90_2111 PF06271 TK90_2111 TK90_2112 PF13472 GDSL-like Lipase/Acylhydrolase family TK90_2113 PF03739 TK90_2113 TK90_2114 PF03739 TK90_2114 TK90_2115 PF00883 Cytosol aminopeptidase family, catalytic domain TK90_2115 PF02789 Cytosol aminopeptidase family, N-terminal domain TK90_2116 PF04364 DNA polymerase III chi subunit, HolC TK90_2117 PF06080 TK90_2117 TK90_2118 PF02577 Bifunctional nuclease TK90_2119 PF00342 Phosphoglucose isomerase TK90_2120 PF00534 Glycosyl transferases group 1 TK90_2120 PF08323 Starch synthase catalytic domain TK90_2121 PF00311 Phosphoenolpyruvate carboxylase TK90_2123 PF00512 His Kinase A (phospho-acceptor) domain TK90_2123 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_2124 PF00072 Response regulator receiver domain TK90_2124 PF00158 Sigma-54 interaction domain TK90_2124 PF02954 Bacterial regulatory protein, Fis family TK90_2125 PF02545 Maf-like protein TK90_2126 PF02590 Predicted SPOUT methyltransferase TK90_2127 PF02410 Oligomerisation domain TK90_2128 PF01467 Cytidylyltransferase TK90_2129 PF00171 Aldehyde dehydrogenase family TK90_2130 PF06144 DNA polymerase III, delta subunit TK90_2131 PF04390 Lipopolysaccharide-assembly TK90_2132 PF00133 tRNA synthetases class I (I, L, M and V) TK90_2132 PF08264 Anticodon-binding domain of tRNA TK90_2132 PF13603 Leucyl-tRNA synthetase, Domain 2 TK90_2133 PF09955 TK90_2133 TK90_2134 PF07295 TK90_2134 TK90_2135 PF00795 Carbon-nitrogen hydrolase TK90_2136 PF00571 CBS domain TK90_2136 PF03471 Transporter associated domain TK90_2137 PF02130 Uncharacterized protein family UPF0054 TK90_2138 PF02562 PhoH-like protein TK90_2139 PF00919 Uncharacterized protein family UPF0004 TK90_2139 PF01938 TRAM domain TK90_2139 PF04055 Radical SAM superfamily TK90_2140 PF00436 Single-strand binding protein family TK90_2141 PF07690 Major Facilitator Superfamily TK90_2142 PF00005 ABC transporter TK90_2143 PF01196 Ribosomal protein L17 TK90_2144 PF01000 RNA polymerase Rpb3/RpoA insert domain TK90_2144 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TK90_2144 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TK90_2145 PF00163 Ribosomal protein S4/S9 N-terminal domain TK90_2145 PF01479 S4 domain TK90_2146 PF00411 Ribosomal protein S11 TK90_2147 PF00416 Ribosomal protein S13/S18 TK90_2148 PF00444 Ribosomal protein L36 TK90_2149 PF00344 SecY translocase TK90_2150 PF00828 Ribosomal protein L18e/L15 TK90_2151 PF00327 Ribosomal protein L30p/L7e TK90_2152 PF00333 Ribosomal protein S5, N-terminal domain TK90_2152 PF03719 Ribosomal protein S5, C-terminal domain TK90_2153 PF00861 Ribosomal L18p/L5e family TK90_2154 PF00347 Ribosomal protein L6 TK90_2155 PF00410 Ribosomal protein S8 TK90_2156 PF00253 Ribosomal protein S14p/S29e TK90_2157 PF00281 Ribosomal protein L5 TK90_2157 PF00673 ribosomal L5P family C-terminus TK90_2158 PF00467 KOW motif TK90_2158 PF17136 TK90_2158 TK90_2159 PF00238 Ribosomal protein L14p/L23e TK90_2160 PF00366 Ribosomal protein S17 TK90_2161 PF00831 Ribosomal L29 protein TK90_2162 PF00252 Ribosomal protein L16p/L10e TK90_2163 PF00189 Ribosomal protein S3, C-terminal domain TK90_2163 PF07650 KH domain TK90_2164 PF00237 Ribosomal protein L22p/L17e TK90_2165 PF00203 Ribosomal protein S19 TK90_2166 PF00181 Ribosomal Proteins L2, RNA binding domain TK90_2166 PF03947 Ribosomal Proteins L2, C-terminal domain TK90_2167 PF00276 Ribosomal protein L23 TK90_2168 PF00573 Ribosomal protein L4/L1 family TK90_2169 PF00297 Ribosomal protein L3 TK90_2170 PF00338 Ribosomal protein S10p/S20e TK90_2171 PF00009 Elongation factor Tu GTP binding domain TK90_2171 PF03143 Elongation factor Tu C-terminal domain TK90_2171 PF03144 Elongation factor Tu domain 2 TK90_2172 PF00009 Elongation factor Tu GTP binding domain TK90_2172 PF00679 Elongation factor G C-terminus TK90_2172 PF03144 Elongation factor Tu domain 2 TK90_2172 PF03764 Elongation factor G, domain IV TK90_2172 PF14492 Elongation Factor G, domain II TK90_2173 PF00177 Ribosomal protein S7p/S5e TK90_2174 PF00164 Ribosomal protein S12/S23 TK90_2175 PF00623 RNA polymerase Rpb1, domain 2 TK90_2175 PF04983 RNA polymerase Rpb1, domain 3 TK90_2175 PF04997 RNA polymerase Rpb1, domain 1 TK90_2175 PF04998 RNA polymerase Rpb1, domain 5 TK90_2175 PF05000 RNA polymerase Rpb1, domain 4 TK90_2176 PF00562 RNA polymerase Rpb2, domain 6 TK90_2176 PF04560 RNA polymerase Rpb2, domain 7 TK90_2176 PF04561 RNA polymerase Rpb2, domain 2 TK90_2176 PF04563 RNA polymerase beta subunit TK90_2176 PF04565 RNA polymerase Rpb2, domain 3 TK90_2176 PF10385 RNA polymerase beta subunit external 1 domain TK90_2177 PF00542 Ribosomal protein L7/L12 C-terminal domain TK90_2177 PF16320 TK90_2177 TK90_2178 PF00466 Ribosomal protein L10 TK90_2179 PF00687 Ribosomal protein L1p/L10e family TK90_2180 PF00298 Ribosomal protein L11, RNA binding domain TK90_2180 PF03946 Ribosomal protein L11, N-terminal domain TK90_2181 PF00467 KOW motif TK90_2181 PF02357 Transcription termination factor nusG TK90_2182 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TK90_2183 PF00009 Elongation factor Tu GTP binding domain TK90_2183 PF03143 Elongation factor Tu C-terminal domain TK90_2183 PF03144 Elongation factor Tu domain 2 TK90_2184 PF00437 Type II/IV secretion system protein TK90_2184 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TK90_2185 PF00482 Type II secretion system (T2SS), protein F TK90_2186 PF01478 Type IV leader peptidase family TK90_2186 PF06750 TK90_2186 TK90_2187 PF01121 Dephospho-CoA kinase TK90_2188 PF07072 Protein of unknown function (DUF1342) TK90_2189 PF00293 NUDIX domain TK90_2189 PF02581 Thiamine monophosphate synthase/TENI TK90_2190 PF01960 ArgJ family TK90_2191 PF01043 SecA preprotein cross-linking domain TK90_2191 PF02810 SEC-C motif TK90_2191 PF07516 SecA Wing and Scaffold domain TK90_2191 PF07517 SecA DEAD-like domain TK90_2192 PF01551 Peptidase family M23 TK90_2193 PF05258 TK90_2193 TK90_2194 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase TK90_2195 PF00091 Tubulin/FtsZ family, GTPase domain TK90_2195 PF12327 FtsZ family, C-terminal domain TK90_2196 PF02491 SHS2 domain inserted in FTSA TK90_2196 PF14450 Cell division protein FtsA TK90_2197 PF03799 Cell division protein FtsQ TK90_2197 PF08478 POTRA domain, FtsQ-type TK90_2198 PF01820 D-ala D-ala ligase N-terminus TK90_2198 PF07478 D-ala D-ala ligase C-terminus TK90_2199 PF01565 FAD binding domain TK90_2199 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TK90_2200 PF01225 Mur ligase family, catalytic domain TK90_2200 PF02875 Mur ligase family, glutamate ligase domain TK90_2200 PF08245 Mur ligase middle domain TK90_2201 PF03033 Glycosyltransferase family 28 N-terminal domain TK90_2201 PF04101 Glycosyltransferase family 28 C-terminal domain TK90_2202 PF01098 TK90_2202 TK90_2203 PF08245 Mur ligase middle domain TK90_2204 PF00953 Glycosyl transferase family 4 TK90_2204 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TK90_2205 PF02875 Mur ligase family, glutamate ligase domain TK90_2205 PF08245 Mur ligase middle domain TK90_2206 PF01225 Mur ligase family, catalytic domain TK90_2206 PF02875 Mur ligase family, glutamate ligase domain TK90_2206 PF08245 Mur ligase middle domain TK90_2207 PF00905 Penicillin binding protein transpeptidase domain TK90_2207 PF03717 Penicillin-binding Protein dimerisation domain TK90_2208 PF04999 TK90_2208 TK90_2209 PF01795 MraW methylase family TK90_2210 PF02381 MraZ protein TK90_2211 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TK90_2212 PF04348 LppC putative lipoprotein TK90_2213 PF02021 Uncharacterised protein family UPF0102 TK90_2214 PF01565 FAD binding domain TK90_2214 PF02913 FAD linked oxidases, C-terminal domain TK90_2215 PF04386 Stringent starvation protein B TK90_2216 PF00043 Glutathione S-transferase, C-terminal domain TK90_2216 PF13417 Glutathione S-transferase, N-terminal domain TK90_2217 PF02167 Cytochrome C1 family TK90_2218 PF00032 Cytochrome b(C-terminal)/b6/petD TK90_2218 PF00033 Cytochrome b(N-terminal)/b6/petB TK90_2219 PF00355 Rieske [2Fe-2S] domain TK90_2219 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TK90_2220 PF01784 NIF3 (NGG1p interacting factor 3) TK90_2221 PF13180 PDZ domain TK90_2221 PF13365 Trypsin-like peptidase domain TK90_2222 PF05425 TK90_2222 TK90_2223 PF04234 CopC domain TK90_2224 PF07731 Multicopper oxidase TK90_2224 PF07732 Multicopper oxidase TK90_2225 PF01391 Collagen triple helix repeat (20 copies) TK90_2225 PF02321 Outer membrane efflux protein TK90_2227 PF01433 Peptidase family M1 TK90_2227 PF11940 Domain of unknown function (DUF3458) TK90_2227 PF17432 TK90_2227 TK90_2228 PF01026 TatD related DNase TK90_2229 PF13740 ACT domain TK90_2230 PF01381 Helix-turn-helix TK90_2232 PF08443 RimK-like ATP-grasp domain TK90_2232 PF14401 TK90_2232 TK90_2233 PF00583 Acetyltransferase (GNAT) family TK90_2233 PF11814 TK90_2233 TK90_2234 PF09382 RQC domain TK90_2236 PF13419 Haloacid dehalogenase-like hydrolase TK90_2237 PF01722 BolA-like protein TK90_2238 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase TK90_2240 PF00270 DEAD/DEAH box helicase TK90_2240 PF00271 Helicase conserved C-terminal domain TK90_2240 PF06224 TK90_2240 TK90_2240 PF08494 TK90_2240 TK90_2241 PF01220 Dehydroquinase class II TK90_2242 PF00364 Biotin-requiring enzyme TK90_2243 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain TK90_2243 PF02785 Biotin carboxylase C-terminal domain TK90_2243 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TK90_2244 PF06325 Ribosomal protein L11 methyltransferase (PrmA) TK90_2246 PF01207 Dihydrouridine synthase (Dus) TK90_2247 PF02954 Bacterial regulatory protein, Fis family TK90_2248 PF00459 Inositol monophosphatase family TK90_2249 PF10084 TK90_2249 TK90_2250 PF00300 Histidine phosphatase superfamily (branch 1) TK90_2251 PF01510 N-acetylmuramoyl-L-alanine amidase TK90_2252 PF00085 Thioredoxin TK90_2253 PF08085 TK90_2253 TK90_2254 PF00580 UvrD/REP helicase N-terminal domain TK90_2254 PF13361 UvrD-like helicase C-terminal domain TK90_2255 PF00999 Sodium/hydrogen exchanger family TK90_2255 PF03471 Transporter associated domain TK90_2256 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) TK90_2257 PF00753 Metallo-beta-lactamase superfamily TK90_2258 PF04367 TK90_2258 TK90_2259 PF02441 Flavoprotein TK90_2259 PF04127 DNA / pantothenate metabolism flavoprotein TK90_2260 PF00692 dUTPase TK90_2261 PF01625 Peptide methionine sulfoxide reductase TK90_2262 PF07995 Glucose / Sorbosone dehydrogenase TK90_2263 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain TK90_2263 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain TK90_2264 PF03279 TK90_2264 TK90_2265 PF14559 Tetratricopeptide repeat TK90_2266 PF02386 Cation transport protein TK90_2267 PF02080 TrkA-C domain TK90_2267 PF02254 TrkA-N domain TK90_2268 PF00072 Response regulator receiver domain TK90_2268 PF00158 Sigma-54 interaction domain TK90_2268 PF02954 Bacterial regulatory protein, Fis family TK90_2269 PF00512 His Kinase A (phospho-acceptor) domain TK90_2269 PF00672 HAMP domain TK90_2269 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_2270 PF14334 TK90_2270 TK90_2271 PF01029 NusB family TK90_2271 PF01189 NOL1/NOP2/sun family TK90_2271 PF17125 TK90_2271 TK90_2272 PF00551 Formyl transferase TK90_2272 PF02911 Formyl transferase, C-terminal domain TK90_2273 PF01327 Polypeptide deformylase TK90_2274 PF01476 LysM domain TK90_2275 PF02481 DNA recombination-mediator protein A TK90_2276 PF04361 TK90_2276 TK90_2277 PF01131 DNA topoisomerase TK90_2277 PF01751 Toprim domain TK90_2277 PF13368 TK90_2277 TK90_2278 PF01300 Telomere recombination TK90_2279 PF01218 Coproporphyrinogen III oxidase TK90_2280 PF00490 Delta-aminolevulinic acid dehydratase TK90_2281 PF01488 Shikimate / quinate 5-dehydrogenase TK90_2281 PF08501 Shikimate dehydrogenase substrate binding domain TK90_2282 PF00691 OmpA family TK90_2282 PF13488 TK90_2282 TK90_2283 PF01040 UbiA prenyltransferase family TK90_2284 PF00156 Phosphoribosyl transferase domain TK90_2286 PF04055 Radical SAM superfamily TK90_2286 PF06968 Biotin and Thiamin Synthesis associated domain TK90_2287 PF08241 Methyltransferase domain TK90_2288 PF00155 Aminotransferase class I and II TK90_2289 PF13488 TK90_2289 TK90_2290 PF04235 TK90_2290 TK90_2291 PF04002 RadC-like JAB domain TK90_2292 PF00920 Dehydratase family TK90_2293 PF00403 Heavy-metal-associated domain TK90_2294 PF02643 Uncharacterized ACR, COG1430 TK90_2295 PF00583 Acetyltransferase (GNAT) family TK90_2295 PF00696 Amino acid kinase family TK90_2296 PF04116 TK90_2296 TK90_2297 PF01258 Prokaryotic dksA/traR C4-type zinc finger TK90_2298 PF00149 Calcineurin-like phosphoesterase TK90_2299 PF01636 Phosphotransferase enzyme family TK90_2300 PF00483 Nucleotidyl transferase TK90_2301 PF02635 DsrE/DsrF-like family TK90_2303 PF04542 Sigma-70 region 2 TK90_2303 PF08281 Sigma-70, region 4 TK90_2306 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family TK90_2309 PF04338 Protein of unknown function, DUF481 TK90_2310 PF02754 TK90_2310 TK90_2310 PF13534 4Fe-4S dicluster domain TK90_2311 PF03232 TK90_2311 TK90_2312 PF00534 Glycosyl transferases group 1 TK90_2312 PF05116 Sucrose-6F-phosphate phosphohydrolase TK90_2312 PF13439 Glycosyltransferase Family 4 TK90_2313 PF12899 TK90_2313 TK90_2314 PF00440 Bacterial regulatory proteins, tetR family TK90_2314 PF13977 Bacterial transcriptional repressor TK90_2315 PF01322 Cytochrome C' TK90_2316 PF16576 TK90_2316 TK90_2317 PF00873 AcrB/AcrD/AcrF family TK90_2318 PF00563 EAL domain TK90_2319 PF01641 SelR domain TK90_2320 PF07690 Major Facilitator Superfamily TK90_2321 PF00873 AcrB/AcrD/AcrF family TK90_2322 PF16576 TK90_2322 TK90_2323 PF13409 Glutathione S-transferase, N-terminal domain TK90_2323 PF13410 Glutathione S-transferase, C-terminal domain TK90_2324 PF04262 Glutamate-cysteine ligase TK90_2325 PF03306 Alpha-acetolactate decarboxylase TK90_2326 PF12833 Helix-turn-helix domain TK90_2327 PF13847 Methyltransferase domain TK90_2328 PF01152 Bacterial-like globin TK90_2329 PF03625 Domain of unknown function DUF302 TK90_2331 PF10081 TK90_2331 TK90_2331 PF15420 TK90_2331 TK90_2334 PF13505 Outer membrane protein beta-barrel domain TK90_2335 PF06167 Glucose-regulated metallo-peptidase M90 TK90_2336 PF03748 TK90_2336 TK90_2338 PF00005 ABC transporter TK90_2338 PF12848 ABC transporter TK90_2338 PF16326 TK90_2338 TK90_2339 PF00990 GGDEF domain TK90_2340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TK90_2340 PF03466 LysR substrate binding domain TK90_2341 PF11743 TK90_2341 TK90_2342 PF00459 Inositol monophosphatase family TK90_2343 PF00211 Adenylate and Guanylate cyclase catalytic domain TK90_2345 PF01963 TK90_2345 TK90_2346 PF08240 Alcohol dehydrogenase GroES-like domain TK90_2346 PF13602 Zinc-binding dehydrogenase TK90_2347 PF03843 TK90_2347 TK90_2348 PF03843 TK90_2348 TK90_2349 PF08668 HDOD domain TK90_2350 PF01738 Dienelactone hydrolase family TK90_2351 PF00072 Response regulator receiver domain TK90_2352 PF00583 Acetyltransferase (GNAT) family TK90_2352 PF00795 Carbon-nitrogen hydrolase TK90_2354 PF03703 TK90_2354 TK90_2355 PF02675 S-adenosylmethionine decarboxylase TK90_2356 PF02566 OsmC-like protein TK90_2357 PF00027 Cyclic nucleotide-binding domain TK90_2357 PF00325 Bacterial regulatory proteins, crp family TK90_2358 PF00218 Indole-3-glycerol phosphate synthase TK90_2359 PF00591 Glycosyl transferase family, a/b domain TK90_2359 PF02885 Glycosyl transferase family, helical bundle domain TK90_2360 PF07690 Major Facilitator Superfamily TK90_2361 PF00117 Glutamine amidotransferase class-I TK90_2362 PF00425 chorismate binding enzyme TK90_2362 PF04715 Anthranilate synthase component I, N terminal region TK90_2363 PF13419 Haloacid dehalogenase-like hydrolase TK90_2364 PF00834 Ribulose-phosphate 3 epimerase family TK90_2365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TK90_2366 PF01891 Cobalt uptake substrate-specific transmembrane region TK90_2367 PF05175 Methyltransferase small domain TK90_2368 PF02222 ATP-grasp domain TK90_2369 PF00731 AIR carboxylase TK90_2370 PF03881 Fructosamine kinase TK90_2371 PF01152 Bacterial-like globin TK90_2373 PF01464 Transglycosylase SLT domain TK90_2373 PF14718 Soluble lytic murein transglycosylase L domain TK90_2374 PF00849 RNA pseudouridylate synthase TK90_2375 PF06226 TK90_2375 TK90_2376 PF01367 5'-3' exonuclease, C-terminal SAM fold TK90_2376 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TK90_2377 PF00056 lactate/malate dehydrogenase, NAD binding domain TK90_2377 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TK90_2378 PF00390 Malic enzyme, N-terminal domain TK90_2378 PF03949 Malic enzyme, NAD binding domain TK90_2379 PF01435 Peptidase family M48 TK90_2381 PF01197 Ribosomal protein L31 TK90_2382 PF00919 Uncharacterized protein family UPF0004 TK90_2382 PF04055 Radical SAM superfamily TK90_2383 PF01259 SAICAR synthetase TK90_2384 PF13500 AAA domain TK90_2385 PF04366 TK90_2385 TK90_2386 PF01116 Fructose-bisphosphate aldolase class-II TK90_2387 PF00224 Pyruvate kinase, barrel domain TK90_2387 PF02887 Pyruvate kinase, alpha/beta domain TK90_2388 PF00162 Phosphoglycerate kinase TK90_2389 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TK90_2389 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TK90_2390 PF00456 Transketolase, thiamine diphosphate binding domain TK90_2390 PF02779 Transketolase, pyrimidine binding domain TK90_2390 PF02780 Transketolase, C-terminal domain TK90_2391 PF00438 S-adenosylmethionine synthetase, N-terminal domain TK90_2391 PF02772 S-adenosylmethionine synthetase, central domain TK90_2391 PF02773 S-adenosylmethionine synthetase, C-terminal domain TK90_2392 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TK90_2392 PF05221 S-adenosyl-L-homocysteine hydrolase TK90_2393 PF02219 Methylenetetrahydrofolate reductase TK90_2394 PF04452 RNA methyltransferase TK90_2396 PF00072 Response regulator receiver domain TK90_2396 PF01584 CheW-like domain TK90_2396 PF01627 Hpt domain TK90_2396 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_2397 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TK90_2397 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term TK90_2398 PF01584 CheW-like domain TK90_2399 PF00072 Response regulator receiver domain TK90_2400 PF00072 Response regulator receiver domain TK90_2401 PF02951 Prokaryotic glutathione synthetase, N-terminal domain TK90_2401 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain TK90_2402 PF02424 ApbE family TK90_2403 PF07009 Protein of unknown function (DUF1312) TK90_2404 PF07456 TK90_2404 TK90_2405 PF03544 Gram-negative bacterial TonB protein C-terminal TK90_2406 PF02622 Uncharacterized ACR, COG1678 TK90_2407 PF03652 Uncharacterised protein family (UPF0081) TK90_2408 PF00156 Phosphoribosyl transferase domain TK90_2409 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TK90_2409 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TK90_2410 PF01979 Amidohydrolase family TK90_2411 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TK90_2412 PF00437 Type II/IV secretion system protein TK90_2413 PF00437 Type II/IV secretion system protein TK90_2414 PF00437 Type II/IV secretion system protein TK90_2415 PF01168 Alanine racemase, N-terminal domain TK90_2416 PF03807 NADP oxidoreductase coenzyme F420-dependent TK90_2416 PF14748 Pyrroline-5-carboxylate reductase dimerisation TK90_2417 PF00459 Inositol monophosphatase family TK90_2418 PF00293 NUDIX domain TK90_2420 PF13419 Haloacid dehalogenase-like hydrolase TK90_2422 PF06508 Queuosine biosynthesis protein QueC TK90_2423 PF05099 Tellurite resistance protein TerB TK90_2424 PF13386 TK90_2424 TK90_2425 PF14467 Domain of unknown function (DUF4426) TK90_2426 PF02325 TK90_2426 TK90_2427 PF03618 TK90_2427 TK90_2428 PF00391 PEP-utilising enzyme, mobile domain TK90_2428 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TK90_2428 PF02896 PEP-utilising enzyme, TIM barrel domain TK90_2429 PF05618 Putative ATP-dependant zinc protease TK90_2430 PF14400 TK90_2430 TK90_2430 PF14402 TK90_2430 TK90_2431 PF14397 TK90_2431 TK90_2432 PF01475 Ferric uptake regulator family TK90_2433 PF03167 Uracil DNA glycosylase superfamily TK90_2435 PF01297 Periplasmic solute binding protein family TK90_2436 PF00005 ABC transporter TK90_2437 PF00950 TK90_2437 TK90_2439 PF02649 Type I GTP cyclohydrolase folE2 TK90_2440 PF01258 Prokaryotic dksA/traR C4-type zinc finger TK90_2441 PF02492 CobW/HypB/UreG, nucleotide-binding domain TK90_2441 PF07683 Cobalamin synthesis protein cobW C-terminal domain TK90_2442 PF08856 TK90_2442 TK90_2444 PF08279 HTH domain TK90_2444 PF13280 TK90_2444 TK90_2445 PF14397 TK90_2445 TK90_2446 PF08797 HIRAN domain TK90_2447 PF01867 CRISPR associated protein Cas1 TK90_2449 PF09611 TK90_2449 TK90_2450 PF09614 TK90_2450 TK90_2451 PF09615 TK90_2451 TK90_2452 PF09618 CRISPR-associated protein (Cas_Csy4) TK90_2453 PF00171 Aldehyde dehydrogenase family TK90_2454 PF13460 NADH(P)-binding TK90_2455 PF01743 Poly A polymerase head domain TK90_2455 PF01966 HD domain TK90_2455 PF12627 Probable RNA and SrmB- binding site of polymerase A TK90_2456 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TK90_2457 PF02321 Outer membrane efflux protein TK90_2458 PF00857 Isochorismatase family TK90_2461 PF04204 Homoserine O-succinyltransferase TK90_2462 PF07690 Major Facilitator Superfamily TK90_2463 PF02390 Putative methyltransferase TK90_2464 PF05690 Thiazole biosynthesis protein ThiG TK90_2465 PF02597 ThiS family TK90_2466 PF01475 Ferric uptake regulator family TK90_2467 PF00270 DEAD/DEAH box helicase TK90_2467 PF00271 Helicase conserved C-terminal domain TK90_2468 PF00085 Thioredoxin TK90_2469 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TK90_2469 PF07497 Rho termination factor, RNA-binding domain TK90_2469 PF07498 Rho termination factor, N-terminal domain TK90_2471 PF14255 TK90_2471 TK90_2472 PF04055 Radical SAM superfamily TK90_2472 PF06969 HemN C-terminal domain TK90_2473 PF01725 Ham1 family TK90_2474 PF01138 3' exoribonuclease family, domain 1 TK90_2474 PF03725 3' exoribonuclease family, domain 2 TK90_2475 PF03755 TK90_2475 TK90_2475 PF08340 TK90_2475 TK90_2476 PF11197 TK90_2476 TK90_2477 PF00011 Hsp20/alpha crystallin family TK90_2478 PF00226 DnaJ domain TK90_2478 PF01556 DnaJ C terminal domain TK90_2479 PF13180 PDZ domain TK90_2479 PF13365 Trypsin-like peptidase domain TK90_2480 PF02391 MoaE protein TK90_2481 PF02597 ThiS family TK90_2482 PF01967 MoaC family TK90_2483 PF05170 TK90_2483 TK90_2483 PF13502 TK90_2483 TK90_2484 PF00633 Helix-hairpin-helix motif TK90_2484 PF00730 HhH-GPD superfamily base excision DNA repair protein TK90_2484 PF14815 NUDIX domain TK90_2485 PF04362 Bacterial Fe(2+) trafficking TK90_2486 PF01327 Polypeptide deformylase TK90_2487 PF10604 Polyketide cyclase / dehydrase and lipid transport TK90_2490 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) TK90_2491 PF00293 NUDIX domain TK90_2492 PF00271 Helicase conserved C-terminal domain TK90_2492 PF04851 Type III restriction enzyme, res subunit TK90_2492 PF11907 TK90_2492 TK90_2493 PF01370 NAD dependent epimerase/dehydratase family TK90_2494 PF02698 DUF218 domain TK90_2495 PF02563 Polysaccharide biosynthesis/export protein TK90_2496 PF02397 TK90_2496 TK90_2497 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_2497 PF13185 GAF domain TK90_2498 PF00072 Response regulator receiver domain TK90_2498 PF00158 Sigma-54 interaction domain TK90_2498 PF02954 Bacterial regulatory protein, Fis family TK90_2499 PF13432 Tetratricopeptide repeat TK90_2499 PF14559 Tetratricopeptide repeat TK90_2500 PF08241 Methyltransferase domain TK90_2501 PF07589 TK90_2501 TK90_2502 PF00899 ThiF family TK90_2503 PF13444 Acetyltransferase (GNAT) domain TK90_2504 PF13444 Acetyltransferase (GNAT) domain TK90_2505 PF07238 PilZ domain TK90_2506 PF02706 Chain length determinant protein TK90_2507 PF13614 AAA domain TK90_2509 PF13401 AAA domain TK90_2510 PF01522 Polysaccharide deacetylase TK90_2510 PF11959 TK90_2510 TK90_2511 PF13480 Acetyltransferase (GNAT) domain TK90_2512 PF13692 Glycosyl transferases group 1 TK90_2513 PF09721 TK90_2513 TK90_2513 PF11984 TK90_2513 TK90_2514 PF00534 Glycosyl transferases group 1 TK90_2514 PF13439 Glycosyltransferase Family 4 TK90_2515 PF00733 Asparagine synthase TK90_2515 PF13537 Glutamine amidotransferase domain TK90_2516 PF13489 Methyltransferase domain TK90_2517 PF00534 Glycosyl transferases group 1 TK90_2517 PF13579 Glycosyl transferase 4-like domain TK90_2518 PF00534 Glycosyl transferases group 1 TK90_2518 PF13439 Glycosyltransferase Family 4 TK90_2519 PF00501 AMP-binding enzyme TK90_2520 PF00733 Asparagine synthase TK90_2520 PF13537 Glutamine amidotransferase domain TK90_2521 PF00550 Phosphopantetheine attachment site TK90_2522 PF12146 Putative lysophospholipase TK90_2523 PF12697 Alpha/beta hydrolase family TK90_2524 PF00535 Glycosyl transferase family 2 TK90_2526 PF00501 AMP-binding enzyme TK90_2526 PF13193 AMP-binding enzyme C-terminal domain TK90_2527 PF00005 ABC transporter TK90_2527 PF00664 ABC transporter transmembrane region TK90_2528 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TK90_2528 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TK90_2529 PF00501 AMP-binding enzyme TK90_2529 PF13193 AMP-binding enzyme C-terminal domain TK90_2530 PF04932 TK90_2530 TK90_2534 PF14397 TK90_2534 TK90_2536 PF02655 ATP-grasp domain TK90_2539 PF13480 Acetyltransferase (GNAT) domain TK90_2541 PF01522 Polysaccharide deacetylase TK90_2542 PF02350 UDP-N-acetylglucosamine 2-epimerase TK90_2543 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TK90_2543 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TK90_2543 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TK90_2545 PF04892 TK90_2545 TK90_2546 PF08241 Methyltransferase domain TK90_2550 PF14907 Uncharacterised nucleotidyltransferase TK90_2551 PF13365 Trypsin-like peptidase domain TK90_2552 PF00551 Formyl transferase TK90_2552 PF01842 ACT domain TK90_2553 PF02401 LytB protein TK90_2554 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TK90_2555 PF01252 TK90_2555 TK90_2556 PF00133 tRNA synthetases class I (I, L, M and V) TK90_2556 PF06827 Zinc finger found in FPG and IleRS TK90_2556 PF08264 Anticodon-binding domain of tRNA TK90_2557 PF01687 Riboflavin kinase TK90_2557 PF06574 FAD synthetase TK90_2558 PF03023 TK90_2558 TK90_2559 PF00313 'Cold-shock' DNA-binding domain TK90_2560 PF00106 short chain dehydrogenase TK90_2561 PF05127 Helicase TK90_2561 PF13718 GNAT acetyltransferase 2 TK90_2561 PF17176 TK90_2561 TK90_2562 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TK90_2562 PF12729 TK90_2562 TK90_2563 PF00005 ABC transporter TK90_2563 PF16326 TK90_2563 TK90_2564 PF00582 Universal stress protein family TK90_2565 PF02080 TrkA-C domain TK90_2565 PF03600 Citrate transporter TK90_2566 PF00485 Phosphoribulokinase / Uridine kinase family TK90_2568 PF08495 TK90_2568 TK90_2568 PF10442 TK90_2568 TK90_2569 PF00248 Aldo/keto reductase family TK90_2570 PF01026 TatD related DNase TK90_2571 PF00899 ThiF family TK90_2573 PF01553 Acyltransferase TK90_2574 PF02092 TK90_2574 TK90_2574 PF05746 DALR anticodon binding domain TK90_2575 PF02091 Glycyl-tRNA synthetase alpha subunit TK90_2576 PF01545 Cation efflux family TK90_2576 PF16916 TK90_2576 TK90_2577 PF00120 Glutamine synthetase, catalytic domain TK90_2577 PF03951 Glutamine synthetase, beta-Grasp domain TK90_2578 PF03279 TK90_2578 TK90_2579 PF01171 PP-loop family TK90_2581 PF00561 alpha/beta hydrolase fold TK90_2582 PF02580 D-Tyr-tRNA(Tyr) deacylase TK90_2584 PF01380 SIS domain TK90_2584 PF13522 Glutamine amidotransferase domain TK90_2585 PF00132 Bacterial transferase hexapeptide (six repeats) TK90_2585 PF12804 MobA-like NTP transferase domain TK90_2585 PF14602 Hexapeptide repeat of succinyl-transferase TK90_2586 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain TK90_2586 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TK90_2587 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TK90_2587 PF02874 ATP synthase alpha/beta family, beta-barrel domain TK90_2588 PF00231 ATP synthase TK90_2589 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TK90_2589 PF00306 ATP synthase alpha/beta chain, C terminal domain TK90_2589 PF02874 ATP synthase alpha/beta family, beta-barrel domain TK90_2590 PF00213 ATP synthase delta (OSCP) subunit TK90_2591 PF00430 ATP synthase B/B' CF(0) TK90_2592 PF00137 ATP synthase subunit C TK90_2593 PF00119 ATP synthase A chain TK90_2594 PF03899 TK90_2594 TK90_2595 PF02195 ParB-like nuclease domain TK90_2596 PF13614 AAA domain TK90_2597 PF02527 rRNA small subunit methyltransferase G TK90_2598 PF01134 Glucose inhibited division protein A TK90_2598 PF13932 GidA associated domain 3 TK90_2599 PF01926 50S ribosome-binding GTPase TK90_2599 PF10396 GTP-binding protein TrmE N-terminus TK90_2599 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE TK90_2600 PF02096 60Kd inner membrane protein TK90_2600 PF14849 YidC periplasmic domain TK90_2601 PF01809 TK90_2601 TK90_2602 PF00825 Ribonuclease P TK90_2603 PF00468 Ribosomal protein L34 TK90_2605 PF00436 Single-strand binding protein family TK90_2611 PF13328 HD domain TK90_2616 PF13570 PQQ-like domain TK90_2646 PF03382 TK90_2646 TK90_2647 PF13487 HD domain TK90_2656 PF13223 TK90_2656 TK90_2660 PF03167 Uracil DNA glycosylase superfamily TK90_2665 PF12836 Helix-hairpin-helix motif TK90_2687 PF00563 EAL domain TK90_2687 PF00990 GGDEF domain TK90_2687 PF08448 PAS fold TK90_2689 PF01385 TK90_2689 TK90_2689 PF07282 TK90_2689 TK90_2689 PF12323 TK90_2689 TK90_2695 PF00533 BRCA1 C Terminus (BRCT) domain TK90_2695 PF01653 NAD-dependent DNA ligase adenylation domain TK90_2695 PF03120 NAD-dependent DNA ligase OB-fold domain TK90_2695 PF12826 Helix-hairpin-helix motif TK90_2706 PF00580 UvrD/REP helicase N-terminal domain TK90_2706 PF13361 UvrD-like helicase C-terminal domain TK90_2713 PF01507 Phosphoadenosine phosphosulfate reductase family TK90_2714 PF09722 TK90_2714 TK90_2715 PF08808 TK90_2715 TK90_2717 PF00692 dUTPase TK90_2724 PF01507 Phosphoadenosine phosphosulfate reductase family TK90_2728 PF13360 PQQ-like domain TK90_2730 PF04851 Type III restriction enzyme, res subunit TK90_2736 PF01385 TK90_2736 TK90_2736 PF07282 TK90_2736 TK90_2736 PF12323 TK90_2736 TK90_2742 PF01381 Helix-turn-helix TK90_2743 PF11663 TK90_2743 TK90_2744 PF15937 TK90_2744 TK90_2745 PF01381 Helix-turn-helix TK90_2746 PF00145 C-5 cytosine-specific DNA methylase TK90_2747 PF02086 D12 class N6 adenine-specific DNA methyltransferase TK90_2749 PF14216 TK90_2749 TK90_2753 PF00082 Subtilase family TK90_2756 PF01145 SPFH domain / Band 7 family TK90_2757 PF01957 NfeD-like C-terminal, partner-binding TK90_2758 PF02732 ERCC4 domain TK90_2758 PF14520 Helix-hairpin-helix domain TK90_2760 PF11672 TK90_2760 TK90_2763 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_2768 PF00204 DNA gyrase B TK90_2768 PF00986 DNA gyrase B subunit, carboxyl terminus TK90_2768 PF01751 Toprim domain TK90_2768 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_2770 PF00521 DNA gyrase/topoisomerase IV, subunit A TK90_2770 PF03989 DNA gyrase C-terminal domain, beta-propeller TK90_2771 PF10411 Disulfide bond isomerase protein N-terminus TK90_2771 PF13098 Thioredoxin-like domain TK90_2772 PF08668 HDOD domain TK90_2773 PF01051 Initiator Replication protein TK90_2774 PF13614 AAA domain TK90_2775 PF02195 ParB-like nuclease domain TK90_2777 PF00589 Phage integrase family TK90_2777 PF02899 Phage integrase, N-terminal SAM-like domain TK90_2778 PF11740 TK90_2778 TK90_2779 PF00313 'Cold-shock' DNA-binding domain TK90_2780 PF00436 Single-strand binding protein family TK90_2782 PF10134 TK90_2782 TK90_2783 PF13412 Winged helix-turn-helix DNA-binding TK90_2786 PF00565 Staphylococcal nuclease homologue TK90_2787 PF13245 Part of AAA domain TK90_2787 PF13361 UvrD-like helicase C-terminal domain TK90_2791 PF06961 TK90_2791 TK90_2792 PF00271 Helicase conserved C-terminal domain TK90_2792 PF04851 Type III restriction enzyme, res subunit TK90_2795 PF03133 Tubulin-tyrosine ligase family TK90_2795 PF13640 2OG-Fe(II) oxygenase superfamily TK90_2800 PF04471 Restriction endonuclease TK90_2801 PF08900 TK90_2801 TK90_2802 PF01553 Acyltransferase TK90_2808 PF00072 Response regulator receiver domain TK90_2808 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TK90_2811 PF01368 DHH family TK90_2811 PF02272 DHHA1 domain TK90_2812 PF13098 Thioredoxin-like domain TK90_2813 PF00270 DEAD/DEAH box helicase TK90_2813 PF00271 Helicase conserved C-terminal domain TK90_2814 PF07514 Putative helicase TK90_2815 PF01935 Domain of unknown function DUF87 TK90_2815 PF12696 TraM recognition site of TraD and TraG TK90_2816 PF14348 TK90_2816 TK90_2817 PF00437 Type II/IV secretion system protein TK90_2818 PF04956 TK90_2818 TK90_2819 PF04956 TK90_2819 TK90_2820 PF05101 TK90_2820 TK90_2821 PF03135 TK90_2821 TK90_2823 PF04610 TK90_2823 TK90_2824 PF04335 VirB8 protein TK90_2825 PF03524 Conjugal transfer protein TK90_2826 PF03743 Bacterial conjugation TrbI-like protein TK90_2827 PF01464 Transglycosylase SLT domain TK90_2829 PF10671 Toxin co-regulated pilus biosynthesis protein Q TK90_2830 PF00263 TK90_2830 TK90_2831 PF06864 TK90_2831 TK90_2833 PF00437 Type II/IV secretion system protein TK90_2834 PF00482 Type II secretion system (T2SS), protein F TK90_2835 PF07963 Prokaryotic N-terminal methylation motif TK90_2835 PF08805 PilS N terminal TK90_2839 PF05887 TK90_2839 TK90_2840 PF00589 Phage integrase family TK90_2841 PF04480 Protein of unknown function (DUF559) TK90_2844 PF02599 Global regulator protein family TK90_2848 PF13245 Part of AAA domain TK90_2848 PF13361 UvrD-like helicase C-terminal domain TK90_2850 PF00263 TK90_2850 TK90_2850 PF00691 OmpA family TK90_2855 PF00437 Type II/IV secretion system protein TK90_2856 PF00482 Type II secretion system (T2SS), protein F TK90_2860 PF00437 Type II/IV secretion system protein TK90_2866 PF00990 GGDEF domain TK90_2870 PF12705 PD-(D/E)XK nuclease superfamily TK90_2872 PF07728 AAA domain (dynein-related subfamily) TK90_2872 PF08406 TK90_2872 TK90_2874 PF11348 TK90_2874 TK90_2875 PF00092 von Willebrand factor type A domain TK90_2876 PF13362 Toprim domain TK90_2877 PF13570 PQQ-like domain TK90_2878 PF08536 Whirly transcription factor TK90_2879 PF13614 AAA domain TK90_2880 PF02195 ParB-like nuclease domain TK90_2885 PF00436 Single-strand binding protein family TK90_2886 PF01527 Transposase TK90_2887 PF00665 Integrase core domain TK90_2887 PF13276 TK90_2887