TVD_00010 SM00563 Phosphate acyltransferases TVD_00035 SM00897 FIST N domain TVD_00035 SM01204 TVD_00035 TVD_00090 SM00487 DEAD-like helicases superfamily TVD_00090 SM00490 helicase superfamily c-terminal domain TVD_00100 SM00357 Cold shock protein domain TVD_00100 SM00382 ATPases associated with a variety of cellular activities TVD_00100 SM00959 Rho termination factor, N-terminal domain TVD_00115 SM00729 Elongator protein 3, MiaB family, Radical SAM TVD_00145 SM00271 DnaJ molecular chaperone homology domain TVD_00150 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TVD_00175 SM00478 endonuclease III TVD_00215 SM00487 DEAD-like helicases superfamily TVD_00215 SM00490 helicase superfamily c-terminal domain TVD_00250 SM00387 Histidine kinase-like ATPases TVD_00255 SM00382 ATPases associated with a variety of cellular activities TVD_00255 SM00448 cheY-homologous receiver domain TVD_00260 SM00028 Tetratricopeptide repeats TVD_00320 SM00382 ATPases associated with a variety of cellular activities TVD_00375 SM00530 Helix-turn-helix XRE-family like proteins TVD_00420 SM00382 ATPases associated with a variety of cellular activities TVD_00490 SM00710 Parallel beta-helix repeats TVD_00495 SM00984 UDP binding domain TVD_00505 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVD_00575 SM00904 Riboflavin kinase TVD_00585 SM00357 Cold shock protein domain TVD_00595 SM00052 Putative diguanylate phosphodiesterase TVD_00595 SM00091 PAS domain TVD_00595 SM00267 diguanylate cyclase TVD_00600 SM00331 Sigma factor PP2C-like phosphatases TVD_00600 SM00448 cheY-homologous receiver domain TVD_00610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TVD_00615 SM00448 cheY-homologous receiver domain TVD_00625 SM00138 Methyltransferase, chemotaxis proteins TVD_00630 SM00091 PAS domain TVD_00630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TVD_00640 SM00260 Two component signalling adaptor domain TVD_00645 SM00073 Histidine Phosphotransfer domain TVD_00645 SM00260 Two component signalling adaptor domain TVD_00645 SM00387 Histidine kinase-like ATPases TVD_00645 SM01231 TVD_00645 TVD_00650 SM00448 cheY-homologous receiver domain TVD_00660 SM00382 ATPases associated with a variety of cellular activities TVD_00665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TVD_00665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVD_00670 SM00382 ATPases associated with a variety of cellular activities TVD_00715 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TVD_00735 SM00910 TVD_00735 TVD_00745 SM00881 CoA binding domain TVD_00760 SM00382 ATPases associated with a variety of cellular activities TVD_00775 SM00986 Uracil DNA glycosylase superfamily TVD_00775 SM00987 UreE urease accessory protein, C-terminal domain TVD_00865 SM01209 TVD_00865 TVD_00865 SM01210 TVD_00865 TVD_00870 SM00798 AICARFT/IMPCHase bienzyme TVD_00870 SM00851 MGS-like domain TVD_00890 SM01018 B12 binding domain TVD_00910 SM00448 cheY-homologous receiver domain TVD_00935 SM00829 Enoylreductase TVD_00945 SM00028 Tetratricopeptide repeats TVD_00950 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TVD_00950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVD_00970 SM00267 diguanylate cyclase TVD_00975 SM00382 ATPases associated with a variety of cellular activities TVD_01065 SM00342 helix_turn_helix, arabinose operon control protein TVD_01090 SM01126 TVD_01090 TVD_01105 SM00052 Putative diguanylate phosphodiesterase TVD_01155 SM00849 Metallo-beta-lactamase superfamily TVD_01165 SM01091 Transporter associated domain TVD_01180 SM00644 TVD_01180 TVD_01185 SM00855 Phosphoglycerate mutase family TVD_01220 SM00878 Biotin carboxylase C-terminal domain TVD_01245 SM01004 Delta-aminolevulinic acid dehydratase TVD_01260 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TVD_01260 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TVD_01260 SM00493 TVD_01260 TVD_01275 SM00257 Lysin motif TVD_01300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVD_01300 SM00387 Histidine kinase-like ATPases TVD_01300 SM00388 His Kinase A (phosphoacceptor) domain TVD_01305 SM00382 ATPases associated with a variety of cellular activities TVD_01305 SM00448 cheY-homologous receiver domain TVD_01320 SM00028 Tetratricopeptide repeats TVD_01330 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain TVD_01330 SM01232 TVD_01330 TVD_01355 SM00905 Dihydroneopterin aldolase TVD_01365 SM00938 Nitrogen regulatory protein P-II TVD_01375 SM00382 ATPases associated with a variety of cellular activities TVD_01420 SM00564 beta-propeller repeat TVD_01470 SM00530 Helix-turn-helix XRE-family like proteins TVD_01565 SM00448 cheY-homologous receiver domain TVD_01565 SM00862 Transcriptional regulatory protein, C terminal TVD_01570 SM00387 Histidine kinase-like ATPases TVD_01580 SM00382 ATPases associated with a variety of cellular activities TVD_01580 SM00487 DEAD-like helicases superfamily TVD_01580 SM00490 helicase superfamily c-terminal domain TVD_01580 SM00847 Helicase associated domain (HA2) Add an annotation TVD_01590 SM00836 DALR anticodon binding domain TVD_01590 SM01016 Arginyl tRNA synthetase N terminal dom TVD_01595 SM00487 DEAD-like helicases superfamily TVD_01595 SM00490 helicase superfamily c-terminal domain TVD_01615 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TVD_01615 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TVD_01620 SM00507 HNH nucleases TVD_01630 SM00852 Probable molybdopterin binding domain TVD_01635 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. TVD_01690 SM00382 ATPases associated with a variety of cellular activities TVD_01710 SM00327 von Willebrand factor (vWF) type A domain TVD_01750 SM00400 zinc finger TVD_01750 SM00493 TVD_01750 TVD_01750 SM00766 DNA primase DnaG DnaB-binding TVD_01765 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TVD_01825 SM00965 Secretin and TonB N terminus short domain TVD_01885 SM00382 ATPases associated with a variety of cellular activities TVD_01905 SM00116 Domain in cystathionine beta-synthase and other proteins. TVD_01930 SM00382 ATPases associated with a variety of cellular activities TVD_01980 SM00382 ATPases associated with a variety of cellular activities TVD_01980 SM00487 DEAD-like helicases superfamily TVD_01980 SM00490 helicase superfamily c-terminal domain TVD_02040 SM00822 TVD_02040 TVD_02080 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TVD_02205 SM00842 Cell division protein FtsA TVD_02210 SM00864 Tubulin/FtsZ family, GTPase domain TVD_02210 SM00865 Tubulin/FtsZ family, C-terminal domain TVD_02230 SM00957 SecA DEAD-like domain TVD_02230 SM00958 SecA preprotein cross-linking domain TVD_02300 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TVD_02300 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TVD_02305 SM00649 Ribosomal protein L11/L12 TVD_02330 SM00663 RNA polymerase I subunit A N-terminus TVD_02345 SM00838 Elongation factor G C-terminus TVD_02345 SM00889 Elongation factor G, domain IV TVD_02355 SM01403 TVD_02355 TVD_02375 SM01382 TVD_02375 TVD_02375 SM01383 TVD_02375 TVD_02390 SM00322 K homology RNA-binding domain TVD_02410 SM01374 TVD_02410 TVD_02415 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TVD_02475 SM00363 S4 RNA-binding domain TVD_02475 SM01390 TVD_02475 TVD_02480 SM00662 RNA polymerases D TVD_02505 SM00729 Elongator protein 3, MiaB family, Radical SAM TVD_02520 SM00116 Domain in cystathionine beta-synthase and other proteins. TVD_02520 SM01091 Transporter associated domain TVD_02615 SM00852 Probable molybdopterin binding domain TVD_02635 SM00244 prohibitin homologues TVD_02660 SM00387 Histidine kinase-like ATPases TVD_02660 SM00433 TopoisomeraseII TVD_02735 SM00953 TVD_02735 TVD_02790 SM00235 Zinc-dependent metalloprotease TVD_02800 SM00450 Rhodanese Homology Domain TVD_02805 SM00450 Rhodanese Homology Domain TVD_02870 SM00267 diguanylate cyclase TVD_02960 SM00382 ATPases associated with a variety of cellular activities TVD_02975 SM00487 DEAD-like helicases superfamily TVD_02975 SM00490 helicase superfamily c-terminal domain TVD_02975 SM00847 Helicase associated domain (HA2) Add an annotation TVD_02985 SM00382 ATPases associated with a variety of cellular activities TVD_02985 SM00448 cheY-homologous receiver domain TVD_02990 SM00387 Histidine kinase-like ATPases TVD_02990 SM00388 His Kinase A (phosphoacceptor) domain TVD_03050 SM00062 Bacterial periplasmic substrate-binding proteins TVD_03080 SM00052 Putative diguanylate phosphodiesterase TVD_03080 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_03080 SM00091 PAS domain TVD_03080 SM00267 diguanylate cyclase TVD_03095 SM00831 Cation transporter/ATPase, N-terminus TVD_03100 SM00052 Putative diguanylate phosphodiesterase TVD_03100 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVD_03100 SM00267 diguanylate cyclase TVD_03130 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TVD_03130 SM00954 Region found in RelA / SpoT proteins TVD_03135 SM01409 TVD_03135 TVD_03140 SM00072 Guanylate kinase homologues. TVD_03170 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase TVD_03185 SM00116 Domain in cystathionine beta-synthase and other proteins. TVD_03185 SM01240 TVD_03185 TVD_03200 SM01117 TVD_03200 TVD_03240 SM00155 Phospholipase D. Active site motifs. TVD_03245 SM00091 PAS domain TVD_03245 SM00267 diguanylate cyclase TVD_03285 SM01060 TVD_03285 TVD_03305 SM01034 Sensors of blue-light using FAD TVD_03310 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TVD_03330 SM00849 Metallo-beta-lactamase superfamily TVD_03330 SM01027 Beta-Casp domain TVD_03355 SM00062 Bacterial periplasmic substrate-binding proteins TVD_03355 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. TVD_03365 SM00843 TVD_03365 TVD_03375 SM00382 ATPases associated with a variety of cellular activities TVD_03400 SM01012 TVD_03400 TVD_03415 SM00382 ATPases associated with a variety of cellular activities TVD_03430 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TVD_03470 SM00487 DEAD-like helicases superfamily TVD_03505 SM00450 Rhodanese Homology Domain TVD_03530 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain TVD_03535 SM00851 MGS-like domain TVD_03535 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TVD_03545 SM01103 TVD_03545 TVD_03555 SM00382 ATPases associated with a variety of cellular activities TVD_03610 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TVD_03615 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TVD_03670 SM00316 Ribosomal protein S1-like RNA-binding domain TVD_03670 SM00322 K homology RNA-binding domain TVD_03690 SM01387 TVD_03690 TVD_03695 SM00316 Ribosomal protein S1-like RNA-binding domain TVD_03695 SM00322 K homology RNA-binding domain TVD_03750 SM00507 HNH nucleases TVD_03755 SM00267 diguanylate cyclase TVD_03760 SM00052 Putative diguanylate phosphodiesterase TVD_03760 SM00267 diguanylate cyclase TVD_03775 SM00877 TVD_03775 TVD_03790 SM00450 Rhodanese Homology Domain TVD_03805 SM00267 diguanylate cyclase TVD_03815 SM00450 Rhodanese Homology Domain TVD_03815 SM00849 Metallo-beta-lactamase superfamily TVD_03835 SM00267 diguanylate cyclase TVD_03845 SM00382 ATPases associated with a variety of cellular activities TVD_03890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TVD_03890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVD_03905 SM00450 Rhodanese Homology Domain TVD_03935 SM00671 Sel1-like repeats. TVD_03960 SM00382 ATPases associated with a variety of cellular activities TVD_03985 SM00479 TVD_03985 TVD_03990 SM00116 Domain in cystathionine beta-synthase and other proteins. TVD_04005 SM00116 Domain in cystathionine beta-synthase and other proteins. TVD_04040 SM00382 ATPases associated with a variety of cellular activities TVD_04050 SM00493 TVD_04050 TVD_04080 SM00479 TVD_04080 TVD_04125 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_04125 SM00091 PAS domain TVD_04125 SM00267 diguanylate cyclase TVD_04130 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_04130 SM00091 PAS domain TVD_04130 SM00267 diguanylate cyclase TVD_04145 SM00382 ATPases associated with a variety of cellular activities TVD_04175 SM00450 Rhodanese Homology Domain TVD_04185 SM00563 Phosphate acyltransferases TVD_04195 SM00014 Acid phosphatase homologues TVD_04230 SM00460 Transglutaminase/protease-like homologues TVD_04310 SM00382 ATPases associated with a variety of cellular activities TVD_04310 SM00448 cheY-homologous receiver domain TVD_04315 SM00091 PAS domain TVD_04315 SM00387 Histidine kinase-like ATPases TVD_04315 SM00388 His Kinase A (phosphoacceptor) domain TVD_04365 SM00382 ATPases associated with a variety of cellular activities TVD_04390 SM00090 RIO-like kinase TVD_04440 SM00382 ATPases associated with a variety of cellular activities TVD_04460 SM00287 Bacterial SH3 domain homologues TVD_04505 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TVD_04505 SM00450 Rhodanese Homology Domain TVD_04520 SM00100 Cyclic nucleotide-monophosphate binding domain TVD_04570 SM00478 endonuclease III TVD_04570 SM00525 TVD_04570 TVD_04585 SM00900 TVD_04585 TVD_04615 SM01007 Class II Aldolase and Adducin N-terminal domain TVD_04655 SM00100 Cyclic nucleotide-monophosphate binding domain TVD_04655 SM00419 helix_turn_helix, cAMP Regulatory protein TVD_04715 SM00382 ATPases associated with a variety of cellular activities TVD_04810 SM00028 Tetratricopeptide repeats TVD_04810 SM01043 Bacterial transcriptional activator domain TVD_04835 SM00422 helix_turn_helix, mercury resistance TVD_04890 SM00271 DnaJ molecular chaperone homology domain TVD_04910 SM00562 TVD_04910 TVD_04920 SM00028 Tetratricopeptide repeats TVD_04940 SM00564 beta-propeller repeat TVD_04945 SM00382 ATPases associated with a variety of cellular activities TVD_04985 SM00052 Putative diguanylate phosphodiesterase TVD_04985 SM00091 PAS domain TVD_04985 SM00267 diguanylate cyclase TVD_04985 SM00448 cheY-homologous receiver domain TVD_04990 SM00387 Histidine kinase-like ATPases TVD_05055 SM00771 ZipA, C-terminal domain (FtsZ-binding) TVD_05060 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TVD_05060 SM00292 breast cancer carboxy-terminal domain TVD_05060 SM00532 Ligase N family TVD_05065 SM01321 TVD_05065 TVD_05075 SM00984 UDP binding domain TVD_05085 SM00984 UDP binding domain TVD_05125 SM00858 TVD_05125 TVD_05155 SM01321 TVD_05155 TVD_05225 SM00530 Helix-turn-helix XRE-family like proteins TVD_05255 SM00052 Putative diguanylate phosphodiesterase TVD_05255 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_05255 SM00091 PAS domain TVD_05255 SM00267 diguanylate cyclase TVD_05280 SM00382 ATPases associated with a variety of cellular activities TVD_05285 SM00891 ERCC4 domain TVD_05295 SM00052 Putative diguanylate phosphodiesterase TVD_05295 SM00091 PAS domain TVD_05295 SM00267 diguanylate cyclase TVD_05300 SM00052 Putative diguanylate phosphodiesterase TVD_05300 SM00091 PAS domain TVD_05300 SM00267 diguanylate cyclase TVD_05305 SM00487 DEAD-like helicases superfamily TVD_05305 SM00490 helicase superfamily c-terminal domain TVD_05310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TVD_05310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVD_05330 SM00937 TVD_05330 TVD_05355 SM00387 Histidine kinase-like ATPases TVD_05355 SM00388 His Kinase A (phosphoacceptor) domain TVD_05360 SM00382 ATPases associated with a variety of cellular activities TVD_05360 SM00448 cheY-homologous receiver domain TVD_05365 SM00642 Alpha-amylase domain TVD_05450 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TVD_05485 SM01329 TVD_05485 TVD_05490 SM00859 Semialdehyde dehydrogenase, NAD binding domain TVD_05560 SM00460 Transglutaminase/protease-like homologues TVD_05570 SM00382 ATPases associated with a variety of cellular activities TVD_05580 SM00382 ATPases associated with a variety of cellular activities TVD_05630 SM01323 TVD_05630 TVD_05675 SM00487 DEAD-like helicases superfamily TVD_05675 SM00491 TVD_05675 TVD_05690 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_05690 SM00091 PAS domain TVD_05700 SM00463 Small MutS-related domain TVD_05720 SM00257 Lysin motif TVD_05770 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TVD_05805 SM00116 Domain in cystathionine beta-synthase and other proteins. TVD_05810 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_05810 SM00091 PAS domain TVD_05810 SM00267 diguanylate cyclase TVD_05845 SM00481 DNA polymerase alpha chain like domain TVD_05850 SM00155 Phospholipase D. Active site motifs. TVD_05855 SM00404 Protein tyrosine phosphatase, catalytic domain motif TVD_05915 SM00530 Helix-turn-helix XRE-family like proteins TVD_05945 SM00382 ATPases associated with a variety of cellular activities TVD_05960 SM00404 Protein tyrosine phosphatase, catalytic domain motif TVD_06020 SM00267 diguanylate cyclase TVD_06025 SM00382 ATPases associated with a variety of cellular activities TVD_06035 SM00382 ATPases associated with a variety of cellular activities TVD_06085 SM00487 DEAD-like helicases superfamily TVD_06145 SM01126 TVD_06145 TVD_06190 SM00155 Phospholipase D. Active site motifs. TVD_06225 SM01211 TVD_06225 TVD_06235 SM00382 ATPases associated with a variety of cellular activities TVD_06240 SM00382 ATPases associated with a variety of cellular activities TVD_06265 SM00382 ATPases associated with a variety of cellular activities TVD_06325 SM00382 ATPases associated with a variety of cellular activities TVD_06325 SM00962 SRP54-type protein, GTPase domain TVD_06340 SM00448 cheY-homologous receiver domain TVD_06350 SM00073 Histidine Phosphotransfer domain TVD_06350 SM00260 Two component signalling adaptor domain TVD_06350 SM00387 Histidine kinase-like ATPases TVD_06350 SM01231 TVD_06350 TVD_06355 SM00448 cheY-homologous receiver domain TVD_06375 SM00260 Two component signalling adaptor domain TVD_06380 SM00260 Two component signalling adaptor domain TVD_06405 SM00226 Low molecular weight phosphatase family TVD_06410 SM00316 Ribosomal protein S1-like RNA-binding domain TVD_06415 SM00363 S4 RNA-binding domain TVD_06435 SM00487 DEAD-like helicases superfamily TVD_06435 SM00490 helicase superfamily c-terminal domain TVD_06435 SM00982 TVD_06435 TVD_06435 SM01058 CarD-like/TRCF domain TVD_06460 SM00382 ATPases associated with a variety of cellular activities TVD_06470 SM00849 Metallo-beta-lactamase superfamily TVD_06480 SM00434 DNA Topoisomerase IV TVD_06495 SM00830 Chorismate mutase type II TVD_06520 SM00316 Ribosomal protein S1-like RNA-binding domain TVD_06525 SM00411 bacterial (prokaryotic) histone like domain TVD_06540 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family TVD_06545 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TVD_06555 SM01160 TVD_06555 TVD_06565 SM00992 Hemimethylated DNA-binding protein YccV like TVD_06575 SM01007 Class II Aldolase and Adducin N-terminal domain TVD_06650 SM00487 DEAD-like helicases superfamily TVD_06650 SM00490 helicase superfamily c-terminal domain TVD_06720 SM00825 Beta-ketoacyl synthase TVD_06730 SM00822 TVD_06730 TVD_06735 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TVD_06740 SM00316 Ribosomal protein S1-like RNA-binding domain TVD_06745 SM00382 ATPases associated with a variety of cellular activities TVD_06745 SM01086 C-terminal, D2-small domain, of ClpB protein TVD_06755 SM01329 TVD_06755 TVD_06785 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TVD_06790 SM00052 Putative diguanylate phosphodiesterase TVD_06790 SM00267 diguanylate cyclase TVD_06805 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. TVD_06815 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TVD_06825 SM00382 ATPases associated with a variety of cellular activities TVD_06845 SM00091 PAS domain TVD_06845 SM00267 diguanylate cyclase TVD_06845 SM01079 TVD_06845 TVD_06885 SM00052 Putative diguanylate phosphodiesterase TVD_06885 SM00267 diguanylate cyclase TVD_06910 SM00382 ATPases associated with a variety of cellular activities TVD_06925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TVD_06925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVD_06950 SM00729 Elongator protein 3, MiaB family, Radical SAM TVD_06960 SM00052 Putative diguanylate phosphodiesterase TVD_06960 SM00267 diguanylate cyclase TVD_06975 SM01152 TVD_06975 TVD_06995 SM00954 Region found in RelA / SpoT proteins TVD_07005 SM00465 GIY-YIG type nucleases (URI domain) TVD_07070 SM00855 Phosphoglycerate mutase family TVD_07115 SM00382 ATPases associated with a variety of cellular activities TVD_07150 SM01192 TVD_07150 TVD_07150 SM01193 TVD_07150 TVD_07165 SM00331 Sigma factor PP2C-like phosphatases TVD_07170 SM00267 diguanylate cyclase TVD_07185 SM00062 Bacterial periplasmic substrate-binding proteins TVD_07190 SM00977 TilS substrate C-terminal domain TVD_07200 SM00481 DNA polymerase alpha chain like domain TVD_07240 SM00935 Outer membrane protein (OmpH-like) TVD_07250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TVD_07295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TVD_07315 SM00052 Putative diguanylate phosphodiesterase TVD_07315 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_07315 SM00091 PAS domain TVD_07315 SM00267 diguanylate cyclase TVD_07315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVD_07355 SM00729 Elongator protein 3, MiaB family, Radical SAM TVD_07375 SM00729 Elongator protein 3, MiaB family, Radical SAM TVD_07390 SM00704 CDGSH-type zinc finger. Function unknown. TVD_07455 SM01219 TVD_07455 TVD_07485 SM00267 diguanylate cyclase TVD_07490 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVD_07490 SM00267 diguanylate cyclase TVD_07520 SM00829 Enoylreductase TVD_07550 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TVD_07555 SM00248 ankyrin repeats TVD_07570 SM00487 DEAD-like helicases superfamily TVD_07570 SM00490 helicase superfamily c-terminal domain TVD_07585 SM00849 Metallo-beta-lactamase superfamily TVD_07640 SM00382 ATPases associated with a variety of cellular activities TVD_07645 SM00091 PAS domain TVD_07670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVD_07670 SM00331 Sigma factor PP2C-like phosphatases TVD_07680 SM00062 Bacterial periplasmic substrate-binding proteins TVD_07690 SM01068 Putative carbohydrate binding domain TVD_07695 SM00052 Putative diguanylate phosphodiesterase TVD_07695 SM00091 PAS domain TVD_07695 SM00267 diguanylate cyclase TVD_07705 SM00749 bacterial OsmY and nodulation domain TVD_07710 SM00138 Methyltransferase, chemotaxis proteins TVD_07715 SM00091 PAS domain TVD_07730 SM00419 helix_turn_helix, cAMP Regulatory protein TVD_07735 SM00450 Rhodanese Homology Domain TVD_07760 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TVD_07830 SM00855 Phosphoglycerate mutase family TVD_07870 SM00047 Lysozyme subfamily 2 TVD_07915 SM00138 Methyltransferase, chemotaxis proteins TVD_07920 SM00260 Two component signalling adaptor domain TVD_07920 SM00448 cheY-homologous receiver domain TVD_07925 SM00858 TVD_07925 TVD_07950 SM00422 helix_turn_helix, mercury resistance TVD_07955 SM00411 bacterial (prokaryotic) histone like domain TVD_07960 SM00873 B3/4 domain TVD_07960 SM00874 tRNA synthetase B5 domain TVD_07960 SM00896 Ferredoxin-fold anticodon binding domain TVD_07985 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TVD_07990 SM00849 Metallo-beta-lactamase superfamily TVD_08025 SM00342 helix_turn_helix, arabinose operon control protein TVD_08090 SM00382 ATPases associated with a variety of cellular activities TVD_08105 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVD_08105 SM00382 ATPases associated with a variety of cellular activities TVD_08120 SM00382 ATPases associated with a variety of cellular activities TVD_08125 SM01116 TVD_08125 TVD_08130 SM00052 Putative diguanylate phosphodiesterase TVD_08130 SM00267 diguanylate cyclase TVD_08155 SM00487 DEAD-like helicases superfamily TVD_08175 SM00255 Toll - interleukin 1 - resistance TVD_08180 SM00487 DEAD-like helicases superfamily TVD_08225 SM00382 ATPases associated with a variety of cellular activities TVD_08230 SM00267 diguanylate cyclase TVD_08295 SM00487 DEAD-like helicases superfamily TVD_08295 SM00490 helicase superfamily c-terminal domain TVD_08335 SM00849 Metallo-beta-lactamase superfamily TVD_08340 SM00448 cheY-homologous receiver domain TVD_08340 SM00862 Transcriptional regulatory protein, C terminal TVD_08345 SM00091 PAS domain TVD_08345 SM00387 Histidine kinase-like ATPases TVD_08345 SM00388 His Kinase A (phosphoacceptor) domain TVD_08365 SM00382 ATPases associated with a variety of cellular activities TVD_08445 SM00382 ATPases associated with a variety of cellular activities TVD_08450 SM00116 Domain in cystathionine beta-synthase and other proteins. TVD_08450 SM00924 MgtE intracellular N domain TVD_08455 SM00116 Domain in cystathionine beta-synthase and other proteins. TVD_08455 SM00924 MgtE intracellular N domain TVD_08465 SM01321 TVD_08465 TVD_08480 SM00052 Putative diguanylate phosphodiesterase TVD_08480 SM00062 Bacterial periplasmic substrate-binding proteins TVD_08480 SM00091 PAS domain TVD_08480 SM00267 diguanylate cyclase TVD_08485 SM00267 diguanylate cyclase TVD_08500 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_08500 SM00091 PAS domain TVD_08500 SM00267 diguanylate cyclase TVD_08510 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TVD_08510 SM00465 GIY-YIG type nucleases (URI domain) TVD_08525 SM00986 Uracil DNA glycosylase superfamily TVD_08525 SM00987 UreE urease accessory protein, C-terminal domain TVD_08530 SM01118 TVD_08530 TVD_08555 SM00878 Biotin carboxylase C-terminal domain TVD_08590 SM00917 LeuA allosteric (dimerisation) domain TVD_08595 SM00344 helix_turn_helix ASNC type TVD_08620 SM00450 Rhodanese Homology Domain TVD_08660 SM00478 endonuclease III TVD_08665 SM00363 S4 RNA-binding domain TVD_08670 SM00852 Probable molybdopterin binding domain TVD_08740 SM00506 Appr-1"-p processing enzyme TVD_08775 SM00052 Putative diguanylate phosphodiesterase TVD_08775 SM00267 diguanylate cyclase TVD_08790 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVD_08840 SM00448 cheY-homologous receiver domain TVD_08845 SM00267 diguanylate cyclase TVD_08845 SM00448 cheY-homologous receiver domain TVD_08855 SM00382 ATPases associated with a variety of cellular activities TVD_08875 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVD_08875 SM00091 PAS domain TVD_08875 SM00267 diguanylate cyclase TVD_08880 SM00829 Enoylreductase TVD_08915 SM00052 Putative diguanylate phosphodiesterase TVD_08940 SM00052 Putative diguanylate phosphodiesterase TVD_08940 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_08940 SM00091 PAS domain TVD_08940 SM00267 diguanylate cyclase TVD_08950 SM00587 ZnF_C4 abd HLH domain containing kinases domain TVD_08960 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_08960 SM00091 PAS domain TVD_08960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TVD_08975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TVD_08980 SM00052 Putative diguanylate phosphodiesterase TVD_09015 SM00052 Putative diguanylate phosphodiesterase TVD_09100 SM00091 PAS domain TVD_09100 SM00267 diguanylate cyclase TVD_09120 SM00091 PAS domain TVD_09120 SM00267 diguanylate cyclase TVD_09125 SM01321 TVD_09125 TVD_09135 SM00954 Region found in RelA / SpoT proteins TVD_09190 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TVD_09205 SM00382 ATPases associated with a variety of cellular activities TVD_09225 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TVD_09225 SM00534 ATPase domain of DNA mismatch repair MUTS family TVD_09350 SM00831 Cation transporter/ATPase, N-terminus TVD_09360 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVD_09360 SM00267 diguanylate cyclase TVD_09370 SM00382 ATPases associated with a variety of cellular activities TVD_09400 SM00267 diguanylate cyclase TVD_09415 SM00327 von Willebrand factor (vWF) type A domain TVD_09445 SM00877 TVD_09445 TVD_09450 SM00877 TVD_09450 TVD_09455 SM00877 TVD_09455 TVD_09480 SM00961 Ribulose bisphosphate carboxylase, small chain TVD_09610 SM00382 ATPases associated with a variety of cellular activities TVD_09620 SM00981 TVD_09620 TVD_09635 SM00450 Rhodanese Homology Domain TVD_09725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TVD_09760 SM00052 Putative diguanylate phosphodiesterase TVD_09760 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVD_09760 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_09760 SM00091 PAS domain TVD_09760 SM00267 diguanylate cyclase TVD_09760 SM00448 cheY-homologous receiver domain TVD_09765 SM00448 cheY-homologous receiver domain TVD_09770 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_09770 SM00091 PAS domain TVD_09770 SM00387 Histidine kinase-like ATPases TVD_09770 SM00388 His Kinase A (phosphoacceptor) domain TVD_09780 SM00840 TVD_09780 TVD_09850 SM00382 ATPases associated with a variety of cellular activities TVD_09885 SM00867 YceI-like domain TVD_09955 SM01321 TVD_09955 TVD_09975 SM01011 Aminopeptidase P, N-terminal domain TVD_10000 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TVD_10030 SM00834 Putative regulatory protein TVD_10050 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_10050 SM00091 PAS domain TVD_10050 SM00387 Histidine kinase-like ATPases TVD_10050 SM00388 His Kinase A (phosphoacceptor) domain TVD_10050 SM00448 cheY-homologous receiver domain TVD_10090 SM00530 Helix-turn-helix XRE-family like proteins TVD_10180 SM00052 Putative diguanylate phosphodiesterase TVD_10180 SM00267 diguanylate cyclase TVD_10180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVD_10185 SM00450 Rhodanese Homology Domain TVD_10190 SM00357 Cold shock protein domain TVD_10200 SM00052 Putative diguanylate phosphodiesterase TVD_10200 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_10200 SM00091 PAS domain TVD_10200 SM00267 diguanylate cyclase TVD_10200 SM01079 TVD_10200 TVD_10230 SM00316 Ribosomal protein S1-like RNA-binding domain TVD_10255 SM00052 Putative diguanylate phosphodiesterase TVD_10255 SM00267 diguanylate cyclase TVD_10275 SM00052 Putative diguanylate phosphodiesterase TVD_10285 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain TVD_10285 SM01232 TVD_10285 TVD_10290 SM00382 ATPases associated with a variety of cellular activities TVD_10330 SM00411 bacterial (prokaryotic) histone like domain TVD_10335 SM00382 ATPases associated with a variety of cellular activities TVD_10335 SM00464 Found in ATP-dependent protease La (LON) TVD_10340 SM00382 ATPases associated with a variety of cellular activities TVD_10340 SM00994 ClpX C4-type zinc finger TVD_10340 SM01086 C-terminal, D2-small domain, of ClpB protein TVD_10415 SM00382 ATPases associated with a variety of cellular activities TVD_10435 SM00341 Helicase and RNase D C-terminal TVD_10435 SM00487 DEAD-like helicases superfamily TVD_10435 SM00490 helicase superfamily c-terminal domain TVD_10435 SM00956 TVD_10435 TVD_10445 SM00267 diguanylate cyclase TVD_10455 SM00382 ATPases associated with a variety of cellular activities TVD_10475 SM00671 Sel1-like repeats. TVD_10485 SM00986 Uracil DNA glycosylase superfamily TVD_10485 SM00987 UreE urease accessory protein, C-terminal domain TVD_10515 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TVD_10515 SM00534 ATPase domain of DNA mismatch repair MUTS family TVD_10535 SM00327 von Willebrand factor (vWF) type A domain TVD_10560 SM00382 ATPases associated with a variety of cellular activities TVD_10590 SM00729 Elongator protein 3, MiaB family, Radical SAM TVD_10605 SM00729 Elongator protein 3, MiaB family, Radical SAM TVD_10660 SM00450 Rhodanese Homology Domain TVD_10720 SM00487 DEAD-like helicases superfamily TVD_10755 SM00530 Helix-turn-helix XRE-family like proteins TVD_10790 SM00267 diguanylate cyclase TVD_10830 SM00155 Phospholipase D. Active site motifs. TVD_10840 SM01005 Alanine racemase, C-terminal domain TVD_10845 SM00382 ATPases associated with a variety of cellular activities TVD_10870 SM00967 RNA 2'-O ribose methyltransferase substrate binding TVD_10875 SM00316 Ribosomal protein S1-like RNA-binding domain TVD_10875 SM00357 Cold shock protein domain TVD_10875 SM00955 TVD_10875 TVD_10885 SM00788 Adenylosuccinate synthetase TVD_10895 SM00244 prohibitin homologues TVD_10900 SM00244 prohibitin homologues TVD_10925 SM00358 Double-stranded RNA binding motif TVD_10925 SM00535 Ribonuclease III family TVD_10940 SM00838 Elongation factor G C-terminus TVD_10950 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TVD_10990 SM00849 Metallo-beta-lactamase superfamily TVD_11020 SM00729 Elongator protein 3, MiaB family, Radical SAM TVD_11040 SM00936 Penicillin-binding protein 5, C-terminal domain TVD_11090 SM00650 Ribosomal RNA adenine dimethylases TVD_11125 SM00450 Rhodanese Homology Domain TVD_11145 SM00849 Metallo-beta-lactamase superfamily TVD_11170 SM00382 ATPases associated with a variety of cellular activities TVD_11170 SM00448 cheY-homologous receiver domain TVD_11175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVD_11175 SM00387 Histidine kinase-like ATPases TVD_11175 SM00388 His Kinase A (phosphoacceptor) domain TVD_11180 SM00849 Metallo-beta-lactamase superfamily TVD_11190 SM00434 DNA Topoisomerase IV TVD_11195 SM00155 Phospholipase D. Active site motifs. TVD_11200 SM00052 Putative diguanylate phosphodiesterase TVD_11200 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVD_11200 SM00091 PAS domain TVD_11200 SM00267 diguanylate cyclase TVD_11205 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_11205 SM00267 diguanylate cyclase TVD_11225 SM00487 DEAD-like helicases superfamily TVD_11225 SM00490 helicase superfamily c-terminal domain TVD_11235 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TVD_11235 SM00245 tail specific protease TVD_11245 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TVD_11250 SM00450 Rhodanese Homology Domain TVD_11300 SM00382 ATPases associated with a variety of cellular activities TVD_11300 SM01086 C-terminal, D2-small domain, of ClpB protein TVD_11310 SM00363 S4 RNA-binding domain TVD_11320 SM00938 Nitrogen regulatory protein P-II TVD_11330 SM00881 CoA binding domain TVD_11375 SM00363 S4 RNA-binding domain TVD_11415 SM00479 TVD_11415 TVD_11430 SM00257 Lysin motif TVD_11450 SM00853 MutL C terminal dimerisation domain TVD_11450 SM01340 TVD_11450 TVD_11455 SM00257 Lysin motif TVD_11455 SM00646 TVD_11455 TVD_11475 SM00052 Putative diguanylate phosphodiesterase TVD_11475 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TVD_11475 SM00091 PAS domain TVD_11475 SM00267 diguanylate cyclase TVD_11485 SM00271 DnaJ molecular chaperone homology domain TVD_11555 SM00825 Beta-ketoacyl synthase TVD_11570 SM00822 TVD_11570 TVD_11610 SM00841 Elongation factor P, C-terminal TVD_11610 SM01185 TVD_11610 TVD_11625 SM00052 Putative diguanylate phosphodiesterase TVD_11625 SM00091 PAS domain TVD_11625 SM00267 diguanylate cyclase TVD_11630 SM00271 DnaJ molecular chaperone homology domain TVD_11690 SM00671 Sel1-like repeats. TVD_11735 SM00387 Histidine kinase-like ATPases TVD_11785 SM00382 ATPases associated with a variety of cellular activities TVD_11785 SM00962 SRP54-type protein, GTPase domain TVD_11785 SM00963 SRP54-type protein, helical bundle domain TVD_11795 SM01091 Transporter associated domain TVD_11800 SM00382 ATPases associated with a variety of cellular activities TVD_11840 SM00861 Transketolase, pyrimidine binding domain TVD_11850 SM00670 Large family of predicted nucleotide-binding domains TVD_11865 SM01130 TVD_11865 TVD_11875 SM00849 Metallo-beta-lactamase superfamily TVD_11910 SM00363 S4 RNA-binding domain TVD_11935 SM00859 Semialdehyde dehydrogenase, NAD binding domain TVD_11950 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVD_12000 SM00464 Found in ATP-dependent protease La (LON) TVD_12025 SM00091 PAS domain TVD_12025 SM00267 diguanylate cyclase TVD_12055 SM00479 TVD_12055 TVD_12080 SM01400 TVD_12080 TVD_12100 SM00028 Tetratricopeptide repeats TVD_12110 SM00937 TVD_12110 TVD_12140 SM00845 GatB domain TVD_12175 SM00341 Helicase and RNase D C-terminal TVD_12175 SM00474 3'-5' exonuclease TVD_12260 SM00382 ATPases associated with a variety of cellular activities TVD_12290 SM00883 Chaperonin 10 Kd subunit TVD_12345 SM00729 Elongator protein 3, MiaB family, Radical SAM TVD_12345 SM00876 Biotin and Thiamin Synthesis associated domain TVD_12480 SM00100 Cyclic nucleotide-monophosphate binding domain TVD_12480 SM00419 helix_turn_helix, cAMP Regulatory protein TVD_12545 SM01001 AIR carboxylase TVD_12580 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TVD_12585 SM00861 Transketolase, pyrimidine binding domain TVD_12595 SM00996 S-adenosyl-L-homocysteine hydrolase TVD_12595 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TVD_12615 SM00073 Histidine Phosphotransfer domain TVD_12615 SM00260 Two component signalling adaptor domain TVD_12615 SM00387 Histidine kinase-like ATPases TVD_12615 SM00448 cheY-homologous receiver domain TVD_12615 SM01231 TVD_12615 TVD_12620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TVD_12625 SM00260 Two component signalling adaptor domain TVD_12630 SM00448 cheY-homologous receiver domain TVD_12635 SM00448 cheY-homologous receiver domain TVD_12670 SM00732 Likely ribonuclease with RNase H fold. TVD_12705 SM00382 ATPases associated with a variety of cellular activities TVD_12745 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TVD_12745 SM00475 5'-3' exonuclease TVD_12755 SM00919 Malic enzyme, NAD binding domain TVD_12755 SM01274 TVD_12755 TVD_12800 SM00382 ATPases associated with a variety of cellular activities TVD_12800 SM00962 SRP54-type protein, GTPase domain TVD_12800 SM00963 SRP54-type protein, helical bundle domain TVD_12805 SM00382 ATPases associated with a variety of cellular activities TVD_12870 SM01207 TVD_12870 TVD_12895 SM00382 ATPases associated with a variety of cellular activities TVD_12910 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TVD_12925 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TVD_12930 SM00729 Elongator protein 3, MiaB family, Radical SAM TVD_12985 SM00382 ATPases associated with a variety of cellular activities TVD_12985 SM00448 cheY-homologous receiver domain TVD_12990 SM00387 Histidine kinase-like ATPases TVD_12990 SM00388 His Kinase A (phosphoacceptor) domain TVD_13015 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TVD_13015 SM00474 3'-5' exonuclease TVD_13015 SM00475 5'-3' exonuclease TVD_13015 SM00482 DNA polymerase A domain TVD_13065 SM00267 diguanylate cyclase TVD_13130 SM00267 diguanylate cyclase TVD_13130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVD_13145 SM00861 Transketolase, pyrimidine binding domain TVD_13230 SM00849 Metallo-beta-lactamase superfamily TVD_13245 SM00100 Cyclic nucleotide-monophosphate binding domain TVD_13270 SM00487 DEAD-like helicases superfamily TVD_13290 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TVD_13335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TVD_13335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TVD_13340 SM00052 Putative diguanylate phosphodiesterase TVD_13340 SM00267 diguanylate cyclase TVD_13345 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TVD_13345 SM00267 diguanylate cyclase TVD_13360 SM00331 Sigma factor PP2C-like phosphatases TVD_13360 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain TVD_13365 SM00028 Tetratricopeptide repeats TVD_13365 SM00257 Lysin motif TVD_13385 SM00240 Forkhead associated domain TVD_13430 SM00448 cheY-homologous receiver domain TVD_13430 SM00850 LytTr DNA-binding domain TVD_13480 SM00387 Histidine kinase-like ATPases TVD_13480 SM00433 TopoisomeraseII TVD_13490 SM00480 DNA polymerase III beta subunit TVD_13495 SM00382 ATPases associated with a variety of cellular activities TVD_13495 SM00760 Bacterial dnaA protein helix-turn-helix domain TVD_13510 SM01234 TVD_13510 TVD_13530 SM01228 TVD_13530 TVD_13545 SM00470 ParB-like nuclease domain TVD_13585 SM00382 ATPases associated with a variety of cellular activities TVD_13635 SM00382 ATPases associated with a variety of cellular activities TVD_13635 SM01086 C-terminal, D2-small domain, of ClpB protein TVD_13755 SM00347 helix_turn_helix multiple antibiotic resistance protein TVD_13790 SM01230 TVD_13790