TVD_11400 18f50b8efba10beb6b5daa474ba3d685 146 SUPERFAMILY SSF55961 1 145 3.04E-34 T 11-10-2018 TVD_11400 18f50b8efba10beb6b5daa474ba3d685 146 Gene3D G3DSA:3.30.530.20 4 145 4.9E-37 T 11-10-2018 IPR023393 START-like domain superfamily TVD_11400 18f50b8efba10beb6b5daa474ba3d685 146 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 135 8.8E-31 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 SMART SM00929 91 131 4.3E-19 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 12 650 1.3E-193 T 11-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 106 118 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 SUPERFAMILY SSF54862 83 217 2.68E-36 T 11-10-2018 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 Gene3D G3DSA:3.10.20.740 9 131 1.0E-40 T 11-10-2018 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 39 56 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 9 84 1.3E-19 T 11-10-2018 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 Gene3D G3DSA:3.40.50.740 509 690 5.7E-18 T 11-10-2018 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 Gene3D G3DSA:3.40.50.740 287 348 2.7E-16 T 11-10-2018 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 SUPERFAMILY SSF54292 10 82 1.26E-19 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 Pfam PF00384 Molybdopterin oxidoreductase 280 650 6.4E-31 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 Gene3D G3DSA:3.30.70.20 132 212 7.9E-8 T 11-10-2018 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 Gene3D G3DSA:3.40.228.10 349 410 2.7E-16 T 11-10-2018 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 91 125 1.2E-16 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 153 163 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03615 84d05b7ce4ffc39074c6c59ee8cf5e1f 799 SUPERFAMILY SSF53706 221 675 1.27E-91 T 11-10-2018 TVD_08480 a20a25ce09511dfedd1493404caada00 832 Gene3D G3DSA:3.30.450.20 278 400 6.0E-16 T 11-10-2018 TVD_08480 a20a25ce09511dfedd1493404caada00 832 SUPERFAMILY SSF53850 17 222 9.31E-31 T 11-10-2018 TVD_08480 a20a25ce09511dfedd1493404caada00 832 Pfam PF08447 PAS fold 310 385 2.9E-8 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_08480 a20a25ce09511dfedd1493404caada00 832 SMART SM00062 16 233 1.2E-10 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TVD_08480 a20a25ce09511dfedd1493404caada00 832 Gene3D G3DSA:3.20.20.450 586 832 1.7E-97 T 11-10-2018 IPR035919 EAL domain superfamily TVD_08480 a20a25ce09511dfedd1493404caada00 832 Pfam PF00563 EAL domain 589 824 5.2E-70 T 11-10-2018 IPR001633 EAL domain TVD_08480 a20a25ce09511dfedd1493404caada00 832 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 17 191 3.3E-21 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TVD_08480 a20a25ce09511dfedd1493404caada00 832 SUPERFAMILY SSF55785 275 400 3.14E-11 T 11-10-2018 IPR035965 PAS domain superfamily TVD_08480 a20a25ce09511dfedd1493404caada00 832 SMART SM00267 402 573 3.6E-50 T 11-10-2018 IPR000160 GGDEF domain TVD_08480 a20a25ce09511dfedd1493404caada00 832 Gene3D G3DSA:3.40.190.10 6 107 5.8E-14 T 11-10-2018 TVD_08480 a20a25ce09511dfedd1493404caada00 832 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 410 568 8.8E-30 T 11-10-2018 IPR000160 GGDEF domain TVD_08480 a20a25ce09511dfedd1493404caada00 832 Gene3D G3DSA:3.40.190.10 108 191 2.2E-9 T 11-10-2018 TVD_08480 a20a25ce09511dfedd1493404caada00 832 SMART SM00091 286 354 7.6E-4 T 11-10-2018 IPR000014 PAS domain TVD_08480 a20a25ce09511dfedd1493404caada00 832 Gene3D G3DSA:3.30.70.270 407 585 2.0E-47 T 11-10-2018 TVD_08480 a20a25ce09511dfedd1493404caada00 832 SMART SM00052 583 829 5.6E-110 T 11-10-2018 IPR001633 EAL domain TVD_08480 a20a25ce09511dfedd1493404caada00 832 SUPERFAMILY SSF55073 419 574 7.69E-40 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_08480 a20a25ce09511dfedd1493404caada00 832 SUPERFAMILY SSF141868 588 831 4.71E-84 T 11-10-2018 IPR035919 EAL domain superfamily TVD_08480 a20a25ce09511dfedd1493404caada00 832 Pfam PF00990 Diguanylate cyclase, GGDEF domain 414 567 6.6E-38 T 11-10-2018 IPR000160 GGDEF domain TVD_06940 64c437872e2a852f885f3c10abff3c8f 290 SUPERFAMILY SSF82689 168 263 4.58E-26 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 TVD_06940 64c437872e2a852f885f3c10abff3c8f 290 Pfam PF00924 Mechanosensitive ion channel 60 256 2.8E-50 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TVD_06940 64c437872e2a852f885f3c10abff3c8f 290 Gene3D G3DSA:2.30.30.60 117 166 2.5E-12 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily TVD_06940 64c437872e2a852f885f3c10abff3c8f 290 SUPERFAMILY SSF82861 20 100 1.44E-9 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 TVD_06940 64c437872e2a852f885f3c10abff3c8f 290 Gene3D G3DSA:3.30.70.100 168 260 4.4E-23 T 11-10-2018 TVD_06940 64c437872e2a852f885f3c10abff3c8f 290 SUPERFAMILY SSF50182 103 167 1.11E-15 T 11-10-2018 IPR010920 LSM domain superfamily TVD_07490 175dd6f1979b429923b99e832b4c469e 323 SUPERFAMILY SSF55781 20 164 2.51E-15 T 11-10-2018 TVD_07490 175dd6f1979b429923b99e832b4c469e 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 173 319 3.1E-31 T 11-10-2018 IPR000160 GGDEF domain TVD_07490 175dd6f1979b429923b99e832b4c469e 323 SUPERFAMILY SSF55073 178 319 1.26E-35 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_07490 175dd6f1979b429923b99e832b4c469e 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 171 319 1.2E-33 T 11-10-2018 IPR000160 GGDEF domain TVD_07490 175dd6f1979b429923b99e832b4c469e 323 Gene3D G3DSA:3.30.450.40 18 167 5.3E-9 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_07490 175dd6f1979b429923b99e832b4c469e 323 Gene3D G3DSA:3.30.70.270 168 321 2.7E-40 T 11-10-2018 TVD_07490 175dd6f1979b429923b99e832b4c469e 323 SMART SM00065 14 163 0.0028 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_07490 175dd6f1979b429923b99e832b4c469e 323 SMART SM00267 162 323 2.1E-38 T 11-10-2018 IPR000160 GGDEF domain TVD_13780 a10f782ed485a618ccf4a430e906ef56 360 Gene3D G3DSA:3.40.50.1370 47 345 2.5E-73 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TVD_13780 a10f782ed485a618ccf4a430e906ef56 360 SUPERFAMILY SSF53671 42 350 6.42E-69 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TVD_13780 a10f782ed485a618ccf4a430e906ef56 360 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 173 184 3.8E-19 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TVD_13780 a10f782ed485a618ccf4a430e906ef56 360 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 89 108 3.8E-19 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TVD_13780 a10f782ed485a618ccf4a430e906ef56 360 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 313 336 3.8E-19 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TVD_13780 a10f782ed485a618ccf4a430e906ef56 360 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 303 312 3.8E-19 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TVD_13780 a10f782ed485a618ccf4a430e906ef56 360 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 101 4.1E-23 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_13780 a10f782ed485a618ccf4a430e906ef56 360 PRINTS PR00101 Aspartate carbamoyltransferase signature 307 312 4.1E-23 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_13780 a10f782ed485a618ccf4a430e906ef56 360 PRINTS PR00101 Aspartate carbamoyltransferase signature 118 127 4.1E-23 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_13780 a10f782ed485a618ccf4a430e906ef56 360 PRINTS PR00101 Aspartate carbamoyltransferase signature 329 343 4.1E-23 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_13780 a10f782ed485a618ccf4a430e906ef56 360 PRINTS PR00101 Aspartate carbamoyltransferase signature 172 189 4.1E-23 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_13780 a10f782ed485a618ccf4a430e906ef56 360 Gene3D G3DSA:3.40.50.1370 173 335 2.5E-73 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TVD_13780 a10f782ed485a618ccf4a430e906ef56 360 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 202 346 3.3E-11 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 TVD_13780 a10f782ed485a618ccf4a430e906ef56 360 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 89 96 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TVD_13780 a10f782ed485a618ccf4a430e906ef56 360 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 47 184 2.2E-37 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 TVD_07645 3de2eae767e619a0c9e9e16c6590139c 588 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 129 2.2E-13 T 11-10-2018 IPR000014 PAS domain TVD_07645 3de2eae767e619a0c9e9e16c6590139c 588 Gene3D G3DSA:3.30.450.20 4 149 1.5E-14 T 11-10-2018 TVD_07645 3de2eae767e619a0c9e9e16c6590139c 588 Gene3D G3DSA:2.40.420.20 219 581 1.6E-47 T 11-10-2018 TVD_07645 3de2eae767e619a0c9e9e16c6590139c 588 Gene3D G3DSA:2.40.50.100 233 439 1.6E-47 T 11-10-2018 TVD_07645 3de2eae767e619a0c9e9e16c6590139c 588 SMART SM00091 7 74 2.0E-7 T 11-10-2018 IPR000014 PAS domain TVD_07645 3de2eae767e619a0c9e9e16c6590139c 588 SUPERFAMILY SSF55785 10 121 6.81E-14 T 11-10-2018 IPR035965 PAS domain superfamily TVD_07645 3de2eae767e619a0c9e9e16c6590139c 588 Gene3D G3DSA:2.40.30.170 222 524 1.6E-47 T 11-10-2018 TVD_07645 3de2eae767e619a0c9e9e16c6590139c 588 SUPERFAMILY SSF111369 222 294 5.75E-6 T 11-10-2018 TVD_07645 3de2eae767e619a0c9e9e16c6590139c 588 Gene3D G3DSA:1.10.287.470 267 396 1.6E-47 T 11-10-2018 TVD_07645 3de2eae767e619a0c9e9e16c6590139c 588 Pfam PF00989 PAS fold 10 119 5.8E-11 T 11-10-2018 IPR013767 PAS fold GO:0006355 TVD_07645 3de2eae767e619a0c9e9e16c6590139c 588 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 239 485 9.8E-9 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SUPERFAMILY SSF55785 621 749 1.74E-12 T 11-10-2018 IPR035965 PAS domain superfamily TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Gene3D G3DSA:3.30.450.20 522 575 1.2E-14 T 11-10-2018 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SMART SM00086 709 751 0.32 T 11-10-2018 IPR001610 PAC motif TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SMART SM00086 461 503 8.5E-4 T 11-10-2018 IPR001610 PAC motif TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SMART SM00086 832 874 330.0 T 11-10-2018 IPR001610 PAC motif TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SMART SM00086 582 624 1.5E-5 T 11-10-2018 IPR001610 PAC motif TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Gene3D G3DSA:3.30.450.20 758 872 3.6E-23 T 11-10-2018 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SUPERFAMILY SSF52172 251 382 3.98E-10 T 11-10-2018 IPR011006 CheY-like superfamily TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Pfam PF00072 Response regulator receiver domain 1141 1253 1.9E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Gene3D G3DSA:3.30.450.20 392 521 1.3E-32 T 11-10-2018 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Gene3D G3DSA:3.30.450.20 633 700 6.8E-17 T 11-10-2018 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SUPERFAMILY SSF55874 949 1115 7.99E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SUPERFAMILY SSF55785 747 865 3.22E-22 T 11-10-2018 IPR035965 PAS domain superfamily TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Pfam PF08448 PAS fold 765 874 2.0E-11 T 11-10-2018 IPR013656 PAS fold-4 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Gene3D G3DSA:2.10.70.100 580 626 2.7E-16 T 11-10-2018 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Gene3D G3DSA:2.10.70.100 707 752 9.3E-7 T 11-10-2018 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SMART SM00388 894 960 5.9E-25 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 659 758 1.4E-6 T 11-10-2018 IPR000014 PAS domain TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 389 510 1.3E-13 T 11-10-2018 IPR000014 PAS domain TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 756 880 4.2E-18 T 11-10-2018 IPR000014 PAS domain TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 554 631 6.1E-9 T 11-10-2018 IPR000014 PAS domain TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SUPERFAMILY SSF55785 400 501 2.42E-27 T 11-10-2018 IPR035965 PAS domain superfamily TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1042 1056 7.8E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1100 1113 7.8E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1076 1094 7.8E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1060 1070 7.8E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SUPERFAMILY SSF47384 880 961 1.69E-23 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Pfam PF00512 His Kinase A (phospho-acceptor) domain 894 960 3.8E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SUPERFAMILY SSF52172 130 242 3.95E-5 T 11-10-2018 IPR011006 CheY-like superfamily TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SMART SM00387 1005 1116 2.8E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SUPERFAMILY SSF52172 1137 1257 2.42E-33 T 11-10-2018 IPR011006 CheY-like superfamily TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SMART SM00448 253 365 0.012 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SMART SM00448 1139 1253 5.2E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Gene3D G3DSA:3.40.50.12740 195 388 3.1E-10 T 11-10-2018 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Gene3D G3DSA:3.40.50.12740 1139 1261 4.3E-36 T 11-10-2018 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SUPERFAMILY SSF55785 517 625 1.13E-20 T 11-10-2018 IPR035965 PAS domain superfamily TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Gene3D G3DSA:1.10.287.130 873 958 2.5E-29 T 11-10-2018 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Pfam PF08447 PAS fold 658 743 6.0E-9 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Pfam PF08447 PAS fold 411 496 4.7E-13 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Pfam PF08447 PAS fold 532 618 3.3E-19 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Gene3D G3DSA:3.30.565.10 959 1118 3.7E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SMART SM00091 508 576 1.0 T 11-10-2018 IPR000014 PAS domain TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SMART SM00091 759 826 1.1E-9 T 11-10-2018 IPR000014 PAS domain TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SMART SM00091 389 455 0.008 T 11-10-2018 IPR000014 PAS domain TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SMART SM00091 636 704 19.0 T 11-10-2018 IPR000014 PAS domain TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1006 1114 1.7E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_10050 35942d2ab686a7ee5536760897ac0227 1263 SUPERFAMILY SSF47226 11 114 4.41E-8 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 TVD_00100 494166eca9226145e096750b9dfa90a5 419 SUPERFAMILY SSF68912 1 46 4.32E-12 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily TVD_00100 494166eca9226145e096750b9dfa90a5 419 SMART SM00959 5 47 8.2E-18 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 TVD_00100 494166eca9226145e096750b9dfa90a5 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 7.0E-23 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_00100 494166eca9226145e096750b9dfa90a5 419 Gene3D G3DSA:3.40.50.300 130 417 7.1E-130 T 11-10-2018 TVD_00100 494166eca9226145e096750b9dfa90a5 419 Gene3D G3DSA:2.40.50.140 47 123 2.0E-34 T 11-10-2018 TVD_00100 494166eca9226145e096750b9dfa90a5 419 SUPERFAMILY SSF50249 49 125 1.8E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_00100 494166eca9226145e096750b9dfa90a5 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 8.4E-18 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 TVD_00100 494166eca9226145e096750b9dfa90a5 419 SMART SM00382 170 359 6.5E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_00100 494166eca9226145e096750b9dfa90a5 419 SUPERFAMILY SSF52540 90 371 5.62E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_00100 494166eca9226145e096750b9dfa90a5 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 3.4E-215 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 TVD_00100 494166eca9226145e096750b9dfa90a5 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 246.969 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 TVD_00100 494166eca9226145e096750b9dfa90a5 419 Gene3D G3DSA:1.10.720.10 1 46 1.8E-20 T 11-10-2018 TVD_00100 494166eca9226145e096750b9dfa90a5 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 8.7E-32 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 TVD_00100 494166eca9226145e096750b9dfa90a5 419 SMART SM00357 52 118 1.8E-19 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 TVD_02445 ad184958c83b5357b81e7b1fffe3acbd 168 Gene3D G3DSA:3.30.230.10 76 168 4.2E-36 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TVD_02445 ad184958c83b5357b81e7b1fffe3acbd 168 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 165 33.441 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 TVD_02445 ad184958c83b5357b81e7b1fffe3acbd 168 ProSitePatterns PS00585 Ribosomal protein S5 signature. 30 62 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site TVD_02445 ad184958c83b5357b81e7b1fffe3acbd 168 Pfam PF00333 Ribosomal protein S5, N-terminal domain 13 76 7.7E-26 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 TVD_02445 ad184958c83b5357b81e7b1fffe3acbd 168 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 12 165 5.3E-65 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 TVD_02445 ad184958c83b5357b81e7b1fffe3acbd 168 Gene3D G3DSA:3.30.160.20 4 74 8.2E-28 T 11-10-2018 TVD_02445 ad184958c83b5357b81e7b1fffe3acbd 168 SUPERFAMILY SSF54768 10 78 5.44E-21 T 11-10-2018 TVD_02445 ad184958c83b5357b81e7b1fffe3acbd 168 SUPERFAMILY SSF54211 81 161 1.37E-25 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_02445 ad184958c83b5357b81e7b1fffe3acbd 168 Pfam PF03719 Ribosomal protein S5, C-terminal domain 89 159 1.2E-29 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 TVD_03960 b9915dab031f04226fa5d7e5e50bf1a9 368 SUPERFAMILY SSF52540 19 233 2.17E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_03960 b9915dab031f04226fa5d7e5e50bf1a9 368 SMART SM00382 30 355 4.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_03960 b9915dab031f04226fa5d7e5e50bf1a9 368 Gene3D G3DSA:2.40.50.100 299 367 6.3E-9 T 11-10-2018 TVD_03960 b9915dab031f04226fa5d7e5e50bf1a9 368 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_03960 b9915dab031f04226fa5d7e5e50bf1a9 368 SUPERFAMILY SSF50331 275 366 1.56E-10 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TVD_03960 b9915dab031f04226fa5d7e5e50bf1a9 368 Gene3D G3DSA:3.40.50.300 12 237 2.4E-57 T 11-10-2018 TVD_03960 b9915dab031f04226fa5d7e5e50bf1a9 368 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 10 366 4.6E-106 T 11-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 TVD_03960 b9915dab031f04226fa5d7e5e50bf1a9 368 Pfam PF00005 ABC transporter 23 166 3.7E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_04780 5ed72409286f10ca639f93c47086c118 334 Gene3D G3DSA:1.10.760.10 195 323 7.8E-104 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_04780 5ed72409286f10ca639f93c47086c118 334 SUPERFAMILY SSF46626 195 333 2.08E-38 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_04780 5ed72409286f10ca639f93c47086c118 334 SUPERFAMILY SSF46626 34 196 3.3E-50 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_04780 5ed72409286f10ca639f93c47086c118 334 Pfam PF03150 Di-haem cytochrome c peroxidase 57 208 4.8E-47 T 11-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 TVD_04780 5ed72409286f10ca639f93c47086c118 334 PIRSF PIRSF000294 7 334 6.4E-117 T 11-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 TVD_04780 5ed72409286f10ca639f93c47086c118 334 Gene3D G3DSA:1.10.760.10 48 194 7.8E-104 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_04780 5ed72409286f10ca639f93c47086c118 334 Pfam PF00034 Cytochrome c 216 320 2.3E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_02435 8b60bf80dde6812dfcb53e93fbb86fef 176 Gene3D G3DSA:3.90.930.12 1 81 5.2E-25 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02435 8b60bf80dde6812dfcb53e93fbb86fef 176 PIRSF PIRSF002162 1 176 1.6E-48 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02435 8b60bf80dde6812dfcb53e93fbb86fef 176 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 175 36.41 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TVD_02435 8b60bf80dde6812dfcb53e93fbb86fef 176 Pfam PF00347 Ribosomal protein L6 89 163 1.1E-22 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02435 8b60bf80dde6812dfcb53e93fbb86fef 176 Pfam PF00347 Ribosomal protein L6 12 81 2.6E-14 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02435 8b60bf80dde6812dfcb53e93fbb86fef 176 SUPERFAMILY SSF56053 82 176 3.14E-37 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02435 8b60bf80dde6812dfcb53e93fbb86fef 176 Gene3D G3DSA:3.90.930.12 82 176 1.1E-40 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02435 8b60bf80dde6812dfcb53e93fbb86fef 176 PRINTS PR00059 Ribosomal protein L6 signature 98 114 3.9E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TVD_02435 8b60bf80dde6812dfcb53e93fbb86fef 176 PRINTS PR00059 Ribosomal protein L6 signature 140 161 3.9E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TVD_02435 8b60bf80dde6812dfcb53e93fbb86fef 176 PRINTS PR00059 Ribosomal protein L6 signature 70 95 3.9E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TVD_02435 8b60bf80dde6812dfcb53e93fbb86fef 176 SUPERFAMILY SSF56053 1 81 4.87E-21 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02435 8b60bf80dde6812dfcb53e93fbb86fef 176 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 153 161 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02435 8b60bf80dde6812dfcb53e93fbb86fef 176 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 175 5.7E-72 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TVD_07295 456b5dc98cd6969cc344aa472f66080a 891 SUPERFAMILY SSF81593 210 320 4.0E-10 T 11-10-2018 TVD_07295 456b5dc98cd6969cc344aa472f66080a 891 Pfam PF01909 Nucleotidyltransferase domain 90 118 2.1E-4 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TVD_07295 456b5dc98cd6969cc344aa472f66080a 891 SUPERFAMILY SSF109604 438 601 2.41E-17 T 11-10-2018 TVD_07295 456b5dc98cd6969cc344aa472f66080a 891 Gene3D G3DSA:1.10.3210.10 461 576 4.9E-10 T 11-10-2018 TVD_07295 456b5dc98cd6969cc344aa472f66080a 891 SUPERFAMILY SSF81301 40 184 8.36E-21 T 11-10-2018 TVD_07295 456b5dc98cd6969cc344aa472f66080a 891 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 48 888 2.3E-284 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 TVD_07295 456b5dc98cd6969cc344aa472f66080a 891 SUPERFAMILY SSF55021 820 872 6.87E-8 T 11-10-2018 TVD_07295 456b5dc98cd6969cc344aa472f66080a 891 Pfam PF01966 HD domain 471 600 1.1E-11 T 11-10-2018 IPR006674 HD domain TVD_07295 456b5dc98cd6969cc344aa472f66080a 891 Pfam PF01842 ACT domain 825 860 2.4E-6 T 11-10-2018 IPR002912 ACT domain TVD_07295 456b5dc98cd6969cc344aa472f66080a 891 SUPERFAMILY SSF55021 710 786 3.28E-10 T 11-10-2018 TVD_07295 456b5dc98cd6969cc344aa472f66080a 891 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 891 309.827 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 TVD_07295 456b5dc98cd6969cc344aa472f66080a 891 Pfam PF08335 GlnD PII-uridylyltransferase 194 332 8.7E-38 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 TVD_07295 456b5dc98cd6969cc344aa472f66080a 891 SMART SM00471 467 614 1.6E-10 T 11-10-2018 IPR003607 HD/PDEase domain TVD_07295 456b5dc98cd6969cc344aa472f66080a 891 PIRSF PIRSF006288 22 891 0.0 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 TVD_07870 b4d57f8390fe9ca6153da82f2e68a75f 346 Pfam PF10135 Rod binding protein 55 102 8.5E-13 T 11-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal TVD_07870 b4d57f8390fe9ca6153da82f2e68a75f 346 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 17 324 3.8E-89 T 11-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 TVD_07870 b4d57f8390fe9ca6153da82f2e68a75f 346 Gene3D G3DSA:2.10.70.40 216 268 2.5E-43 T 11-10-2018 TVD_07870 b4d57f8390fe9ca6153da82f2e68a75f 346 PRINTS PR01002 Flagellar protein FlgJ signature 58 78 4.6E-11 T 11-10-2018 TVD_07870 b4d57f8390fe9ca6153da82f2e68a75f 346 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 4.6E-11 T 11-10-2018 TVD_07870 b4d57f8390fe9ca6153da82f2e68a75f 346 PRINTS PR01002 Flagellar protein FlgJ signature 33 56 4.6E-11 T 11-10-2018 TVD_07870 b4d57f8390fe9ca6153da82f2e68a75f 346 Gene3D G3DSA:1.10.530.10 182 320 2.5E-43 T 11-10-2018 TVD_07870 b4d57f8390fe9ca6153da82f2e68a75f 346 SMART SM00047 171 329 9.7E-33 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 TVD_07870 b4d57f8390fe9ca6153da82f2e68a75f 346 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 188 324 5.0E-19 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 TVD_10190 d7051e1bf704ab91e15bf6dee062c841 67 PIRSF PIRSF002599 1 67 1.3E-25 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 TVD_10190 d7051e1bf704ab91e15bf6dee062c841 67 SUPERFAMILY SSF50249 1 65 7.93E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_10190 d7051e1bf704ab91e15bf6dee062c841 67 SMART SM00357 3 67 7.3E-31 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 TVD_10190 d7051e1bf704ab91e15bf6dee062c841 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-10-2018 IPR019844 Cold-shock conserved site TVD_10190 d7051e1bf704ab91e15bf6dee062c841 67 PRINTS PR00050 Cold shock protein signature 40 58 1.1E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TVD_10190 d7051e1bf704ab91e15bf6dee062c841 67 PRINTS PR00050 Cold shock protein signature 4 19 1.1E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TVD_10190 d7051e1bf704ab91e15bf6dee062c841 67 PRINTS PR00050 Cold shock protein signature 25 34 1.1E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TVD_10190 d7051e1bf704ab91e15bf6dee062c841 67 Gene3D G3DSA:2.40.50.140 1 66 4.7E-31 T 11-10-2018 TVD_10190 d7051e1bf704ab91e15bf6dee062c841 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.9E-32 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 ProSitePatterns PS01008 DnaA protein signature. 415 434 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 SMART SM00760 365 434 1.1E-44 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 SUPERFAMILY SSF52540 121 333 3.9E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 4 456 33.34 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 Pfam PF00308 Bacterial dnaA protein 122 339 1.6E-96 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 Gene3D G3DSA:1.10.8.60 288 359 3.3E-23 T 11-10-2018 TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 7 455 7.1E-180 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 219 233 6.8E-53 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 253 280 6.8E-53 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 155 175 6.8E-53 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 415 434 6.8E-53 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 187 201 6.8E-53 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 SMART SM00382 154 363 7.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 Pfam PF11638 DnaA N-terminal domain 4 63 5.2E-15 T 11-10-2018 IPR024633 DnaA N-terminal domain TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 Gene3D G3DSA:3.40.50.300 120 287 9.6E-49 T 11-10-2018 TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 Gene3D G3DSA:3.30.300.180 4 114 1.2E-20 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 SUPERFAMILY SSF48295 354 456 2.12E-37 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 Gene3D G3DSA:1.10.1750.10 364 457 1.7E-37 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 TVD_13495 df12c2bfc243422fef8bae3653e1a7a9 457 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 367 434 2.0E-32 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TVD_01090 d89942113d1b7201ef361485c2f0d757 317 Pfam PF12760 Transposase zinc-ribbon domain 23 69 1.0E-13 T 11-10-2018 IPR024442 Transposase, zinc-ribbon TVD_01090 d89942113d1b7201ef361485c2f0d757 317 Pfam PF12762 ISXO2-like transposase domain 138 283 8.4E-31 T 11-10-2018 IPR024445 ISXO2-like transposase domain TVD_01090 d89942113d1b7201ef361485c2f0d757 317 SMART SM01126 137 283 2.7E-38 T 11-10-2018 IPR024445 ISXO2-like transposase domain TVD_06145 d89942113d1b7201ef361485c2f0d757 317 Pfam PF12760 Transposase zinc-ribbon domain 23 69 1.0E-13 T 11-10-2018 IPR024442 Transposase, zinc-ribbon TVD_06145 d89942113d1b7201ef361485c2f0d757 317 Pfam PF12762 ISXO2-like transposase domain 138 283 8.4E-31 T 11-10-2018 IPR024445 ISXO2-like transposase domain TVD_06145 d89942113d1b7201ef361485c2f0d757 317 SMART SM01126 137 283 2.7E-38 T 11-10-2018 IPR024445 ISXO2-like transposase domain TVD_00865 e0aa6413fd96376c70dd06f904f9e0a2 429 Gene3D G3DSA:3.90.600.10 330 426 2.8E-34 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TVD_00865 e0aa6413fd96376c70dd06f904f9e0a2 429 Gene3D G3DSA:3.30.1490.20 121 190 1.5E-26 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TVD_00865 e0aa6413fd96376c70dd06f904f9e0a2 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 423 1.2E-30 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TVD_00865 e0aa6413fd96376c70dd06f904f9e0a2 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TVD_00865 e0aa6413fd96376c70dd06f904f9e0a2 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 9.0E-78 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TVD_00865 e0aa6413fd96376c70dd06f904f9e0a2 429 SUPERFAMILY SSF52440 1 103 4.89E-37 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TVD_00865 e0aa6413fd96376c70dd06f904f9e0a2 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 7.2E-36 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TVD_00865 e0aa6413fd96376c70dd06f904f9e0a2 429 SMART SM01209 103 296 6.4E-134 T 11-10-2018 TVD_00865 e0aa6413fd96376c70dd06f904f9e0a2 429 Gene3D G3DSA:3.30.470.20 191 329 8.3E-57 T 11-10-2018 TVD_00865 e0aa6413fd96376c70dd06f904f9e0a2 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 425 2.5E-174 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TVD_00865 e0aa6413fd96376c70dd06f904f9e0a2 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 425 43.292 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TVD_00865 e0aa6413fd96376c70dd06f904f9e0a2 429 Gene3D G3DSA:3.40.50.20 2 95 4.3E-39 T 11-10-2018 TVD_00865 e0aa6413fd96376c70dd06f904f9e0a2 429 SMART SM01210 330 425 5.9E-52 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TVD_00865 e0aa6413fd96376c70dd06f904f9e0a2 429 SUPERFAMILY SSF56059 104 325 1.94E-63 T 11-10-2018 TVD_00865 e0aa6413fd96376c70dd06f904f9e0a2 429 SUPERFAMILY SSF51246 329 425 5.76E-32 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TVD_00800 7a8810dba34010f38667a5770b4dcf90 790 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 4 784 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 TVD_00800 7a8810dba34010f38667a5770b4dcf90 790 Gene3D G3DSA:3.30.470.20 189 341 2.9E-52 T 11-10-2018 TVD_00800 7a8810dba34010f38667a5770b4dcf90 790 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 405 416 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TVD_00800 7a8810dba34010f38667a5770b4dcf90 790 SUPERFAMILY SSF56059 1 374 2.83E-101 T 11-10-2018 TVD_00800 7a8810dba34010f38667a5770b4dcf90 790 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 329 3.4E-112 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 TVD_00800 7a8810dba34010f38667a5770b4dcf90 790 Gene3D G3DSA:3.30.1490.20 1 188 6.5E-69 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TVD_00800 7a8810dba34010f38667a5770b4dcf90 790 SUPERFAMILY SSF51621 456 784 1.2E-90 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TVD_00800 7a8810dba34010f38667a5770b4dcf90 790 Gene3D G3DSA:3.50.30.10 366 468 1.3E-40 T 11-10-2018 TVD_00800 7a8810dba34010f38667a5770b4dcf90 790 SUPERFAMILY SSF52009 344 458 4.71E-33 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TVD_00800 7a8810dba34010f38667a5770b4dcf90 790 Pfam PF00391 PEP-utilising enzyme, mobile domain 375 446 1.5E-26 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TVD_00800 7a8810dba34010f38667a5770b4dcf90 790 PIRSF PIRSF000854 1 789 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 TVD_00800 7a8810dba34010f38667a5770b4dcf90 790 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 473 784 2.3E-57 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TVD_00800 7a8810dba34010f38667a5770b4dcf90 790 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 690 708 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 TVD_00800 7a8810dba34010f38667a5770b4dcf90 790 Gene3D G3DSA:3.20.20.60 469 786 1.8E-95 T 11-10-2018 TVD_10095 3c8f012db0795bd859ade73cac1abd1e 620 Pfam PF03600 Citrate transporter 21 568 2.4E-50 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 TVD_10095 3c8f012db0795bd859ade73cac1abd1e 620 SUPERFAMILY SSF116726 332 409 1.57E-19 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_10095 3c8f012db0795bd859ade73cac1abd1e 620 Gene3D G3DSA:3.30.70.1450 243 314 5.4E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_10095 3c8f012db0795bd859ade73cac1abd1e 620 Gene3D G3DSA:3.30.70.1450 333 405 7.8E-19 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_10095 3c8f012db0795bd859ade73cac1abd1e 620 SUPERFAMILY SSF116726 236 316 1.31E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_10095 3c8f012db0795bd859ade73cac1abd1e 620 Pfam PF02080 TrkA-C domain 334 401 3.9E-12 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TVD_10095 3c8f012db0795bd859ade73cac1abd1e 620 Pfam PF02080 TrkA-C domain 244 310 2.6E-8 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TVD_03120 c7e59c39446a97e92a11e9a253ee5b04 220 SUPERFAMILY SSF53335 9 220 3.59E-52 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_03120 c7e59c39446a97e92a11e9a253ee5b04 220 Gene3D G3DSA:3.40.50.150 1 220 3.3E-81 T 11-10-2018 TVD_03120 c7e59c39446a97e92a11e9a253ee5b04 220 Pfam PF01596 O-methyltransferase 22 219 2.9E-68 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 SUPERFAMILY SSF52935 324 458 8.85E-20 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 Gene3D G3DSA:2.40.33.10 74 170 9.1E-148 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 Pfam PF00224 Pyruvate kinase, barrel domain 6 337 1.2E-110 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 PRINTS PR01050 Pyruvate kinase family signature 270 294 1.5E-58 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.5E-58 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 PRINTS PR01050 Pyruvate kinase family signature 218 244 1.5E-58 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 PRINTS PR01050 Pyruvate kinase family signature 295 313 1.5E-58 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 PRINTS PR01050 Pyruvate kinase family signature 188 202 1.5E-58 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 PRINTS PR01050 Pyruvate kinase family signature 245 269 1.5E-58 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 PRINTS PR01050 Pyruvate kinase family signature 314 330 1.5E-58 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 Gene3D G3DSA:3.40.1380.20 337 435 9.1E-148 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 Gene3D G3DSA:3.20.20.60 7 336 9.1E-148 T 11-10-2018 TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 SUPERFAMILY SSF51621 5 339 6.28E-88 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 Pfam PF02887 Pyruvate kinase, alpha/beta domain 364 449 2.7E-12 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 SUPERFAMILY SSF50800 74 168 3.84E-24 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily TVD_03915 33171d92a91c67fdcba7e3cbc4a7a66e 487 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 445 1.2E-141 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_09120 c37f83ca1d2e150a833485bbceb68b63 287 SMART SM00091 7 73 1.9E-12 T 11-10-2018 IPR000014 PAS domain TVD_09120 c37f83ca1d2e150a833485bbceb68b63 287 Gene3D G3DSA:3.30.450.20 9 125 2.1E-24 T 11-10-2018 TVD_09120 c37f83ca1d2e150a833485bbceb68b63 287 SUPERFAMILY SSF55073 133 283 7.14E-46 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_09120 c37f83ca1d2e150a833485bbceb68b63 287 Pfam PF08447 PAS fold 29 106 5.0E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_09120 c37f83ca1d2e150a833485bbceb68b63 287 Pfam PF00990 Diguanylate cyclase, GGDEF domain 128 282 6.9E-48 T 11-10-2018 IPR000160 GGDEF domain TVD_09120 c37f83ca1d2e150a833485bbceb68b63 287 SUPERFAMILY SSF55785 18 125 3.01E-25 T 11-10-2018 IPR035965 PAS domain superfamily TVD_09120 c37f83ca1d2e150a833485bbceb68b63 287 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 124 1.3E-19 T 11-10-2018 IPR000014 PAS domain TVD_09120 c37f83ca1d2e150a833485bbceb68b63 287 SMART SM00267 117 286 7.0E-57 T 11-10-2018 IPR000160 GGDEF domain TVD_09120 c37f83ca1d2e150a833485bbceb68b63 287 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 125 281 1.5E-42 T 11-10-2018 IPR000160 GGDEF domain TVD_09120 c37f83ca1d2e150a833485bbceb68b63 287 Gene3D G3DSA:3.30.70.270 126 287 7.9E-54 T 11-10-2018 TVD_02960 ca362961b7675c13dc0be3dcbd90e717 249 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_02960 ca362961b7675c13dc0be3dcbd90e717 249 Gene3D G3DSA:3.40.50.300 18 246 1.9E-61 T 11-10-2018 TVD_02960 ca362961b7675c13dc0be3dcbd90e717 249 SMART SM00382 48 231 2.9E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_02960 ca362961b7675c13dc0be3dcbd90e717 249 Pfam PF00005 ABC transporter 39 182 5.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_02960 ca362961b7675c13dc0be3dcbd90e717 249 SUPERFAMILY SSF52540 20 238 3.38E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 Gene3D G3DSA:3.30.420.40 23 379 1.6E-113 T 11-10-2018 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 Gene3D G3DSA:3.90.640.10 238 316 1.6E-113 T 11-10-2018 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 SUPERFAMILY SSF53067 21 197 3.02E-50 T 11-10-2018 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 PRINTS PR00301 70kDa heat shock protein signature 390 409 7.6E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 PRINTS PR00301 70kDa heat shock protein signature 48 60 7.6E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 PRINTS PR00301 70kDa heat shock protein signature 152 172 7.6E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 PRINTS PR00301 70kDa heat shock protein signature 471 487 7.6E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 PRINTS PR00301 70kDa heat shock protein signature 20 33 7.6E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 PRINTS PR00301 70kDa heat shock protein signature 211 221 7.6E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 PRINTS PR00301 70kDa heat shock protein signature 365 385 7.6E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 PRINTS PR00301 70kDa heat shock protein signature 334 350 7.6E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 SUPERFAMILY SSF53067 200 382 1.3E-50 T 11-10-2018 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 Gene3D G3DSA:3.30.420.40 194 366 1.6E-113 T 11-10-2018 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 623 41.272 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 622 2.7E-260 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 Gene3D G3DSA:1.20.1270.10 526 622 1.6E-25 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 SUPERFAMILY SSF100934 509 621 7.46E-31 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 SUPERFAMILY SSF100920 390 541 1.28E-47 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 Pfam PF00012 Hsp70 protein 22 606 1.2E-187 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_04895 6ff156bc29942737e7c58c36b9070ce0 627 Gene3D G3DSA:2.60.34.10 384 525 1.1E-48 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TVD_08110 f07a288fced59ff08da1197526383cb3 484 Gene3D G3DSA:3.40.190.10 132 467 3.3E-111 T 11-10-2018 TVD_08110 f07a288fced59ff08da1197526383cb3 484 Pfam PF13379 NMT1-like family 127 364 5.7E-83 T 11-10-2018 TVD_08110 f07a288fced59ff08da1197526383cb3 484 SUPERFAMILY SSF53850 128 353 1.5E-37 T 11-10-2018 TVD_08110 f07a288fced59ff08da1197526383cb3 484 Gene3D G3DSA:3.40.190.10 218 472 3.3E-111 T 11-10-2018 TVD_08110 f07a288fced59ff08da1197526383cb3 484 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 90 110 7.3E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TVD_02130 9364b5fe67ef91c863a2810b5ce8bcc7 268 Gene3D G3DSA:3.30.950.10 95 212 2.7E-35 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TVD_02130 9364b5fe67ef91c863a2810b5ce8bcc7 268 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 261 8.0E-63 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TVD_02130 9364b5fe67ef91c863a2810b5ce8bcc7 268 SUPERFAMILY SSF53790 1 205 8.77E-68 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TVD_02130 9364b5fe67ef91c863a2810b5ce8bcc7 268 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 186 7.5E-27 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TVD_02130 9364b5fe67ef91c863a2810b5ce8bcc7 268 Gene3D G3DSA:3.40.1010.10 1 94 3.9E-30 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TVD_02130 9364b5fe67ef91c863a2810b5ce8bcc7 268 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 65 76 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 TVD_02130 9364b5fe67ef91c863a2810b5ce8bcc7 268 PIRSF PIRSF005917 1 266 1.8E-84 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 SUPERFAMILY SSF55785 556 659 1.19E-27 T 11-10-2018 IPR035965 PAS domain superfamily TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 669 834 2.5E-34 T 11-10-2018 IPR000160 GGDEF domain TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 SMART SM00267 662 835 3.9E-48 T 11-10-2018 IPR000160 GGDEF domain TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 SUPERFAMILY SSF55785 448 546 9.6E-14 T 11-10-2018 IPR035965 PAS domain superfamily TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 SMART SM00052 845 1096 4.5E-113 T 11-10-2018 IPR001633 EAL domain TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 Pfam PF00990 Diguanylate cyclase, GGDEF domain 673 830 7.7E-40 T 11-10-2018 IPR000160 GGDEF domain TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 SUPERFAMILY SSF141868 852 1103 4.71E-88 T 11-10-2018 IPR035919 EAL domain superfamily TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 Gene3D G3DSA:3.30.450.20 544 671 1.3E-35 T 11-10-2018 TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 SUPERFAMILY SSF55073 678 837 2.35E-41 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 SMART SM00086 620 662 2.8E-5 T 11-10-2018 IPR001610 PAC motif TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 SMART SM00086 498 540 0.0012 T 11-10-2018 IPR001610 PAC motif TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 SMART SM00091 424 490 19.0 T 11-10-2018 IPR000014 PAS domain TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 SMART SM00091 548 614 8.2E-9 T 11-10-2018 IPR000014 PAS domain TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 Pfam PF00563 EAL domain 851 1091 1.8E-71 T 11-10-2018 IPR001633 EAL domain TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 Gene3D G3DSA:3.20.20.450 848 1104 8.4E-100 T 11-10-2018 IPR035919 EAL domain superfamily TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 Gene3D G3DSA:3.30.70.270 672 847 4.8E-50 T 11-10-2018 TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 Gene3D G3DSA:3.30.450.20 443 543 2.7E-12 T 11-10-2018 TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 449 546 2.1E-11 T 11-10-2018 IPR000014 PAS domain TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 549 669 1.2E-19 T 11-10-2018 IPR000014 PAS domain TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 Pfam PF13426 PAS domain 559 660 1.1E-16 T 11-10-2018 IPR000014 PAS domain TVD_05255 9e3d80b18e7ce94f8f5efb5a548f0074 1110 Pfam PF13426 PAS domain 436 539 3.7E-5 T 11-10-2018 IPR000014 PAS domain TVD_13115 bab51d22f030b2e0bf2d24f85c36e29f 249 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 15 248 38.731 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 TVD_13115 bab51d22f030b2e0bf2d24f85c36e29f 249 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 35 50 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 TVD_13115 bab51d22f030b2e0bf2d24f85c36e29f 249 SUPERFAMILY SSF53335 12 246 5.73E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_13115 bab51d22f030b2e0bf2d24f85c36e29f 249 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 24 248 1.2E-79 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 TVD_13115 bab51d22f030b2e0bf2d24f85c36e29f 249 Gene3D G3DSA:3.40.50.150 30 249 9.1E-74 T 11-10-2018 TVD_13115 bab51d22f030b2e0bf2d24f85c36e29f 249 Pfam PF01209 ubiE/COQ5 methyltransferase family 20 248 3.0E-94 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 TVD_13115 bab51d22f030b2e0bf2d24f85c36e29f 249 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 157 171 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 TVD_02520 4d8c2fc0c70b83fa8a770605f4fa0250 310 Gene3D G3DSA:3.10.580.10 47 199 1.3E-51 T 11-10-2018 TVD_02520 4d8c2fc0c70b83fa8a770605f4fa0250 310 Pfam PF03471 Transporter associated domain 207 280 1.2E-19 T 11-10-2018 IPR005170 Transporter-associated domain TVD_02520 4d8c2fc0c70b83fa8a770605f4fa0250 310 Gene3D G3DSA:3.30.465.10 202 281 1.8E-26 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TVD_02520 4d8c2fc0c70b83fa8a770605f4fa0250 310 SUPERFAMILY SSF56176 203 287 9.27E-22 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TVD_02520 4d8c2fc0c70b83fa8a770605f4fa0250 310 SUPERFAMILY SSF54631 64 200 9.85E-31 T 11-10-2018 TVD_02520 4d8c2fc0c70b83fa8a770605f4fa0250 310 SMART SM00116 76 125 0.05 T 11-10-2018 IPR000644 CBS domain TVD_02520 4d8c2fc0c70b83fa8a770605f4fa0250 310 SMART SM00116 140 188 2.7 T 11-10-2018 IPR000644 CBS domain TVD_02520 4d8c2fc0c70b83fa8a770605f4fa0250 310 Pfam PF00571 CBS domain 67 124 6.1E-6 T 11-10-2018 IPR000644 CBS domain TVD_02520 4d8c2fc0c70b83fa8a770605f4fa0250 310 Pfam PF00571 CBS domain 139 188 5.4E-5 T 11-10-2018 IPR000644 CBS domain TVD_02520 4d8c2fc0c70b83fa8a770605f4fa0250 310 SMART SM01091 205 283 6.8E-27 T 11-10-2018 IPR005170 Transporter-associated domain TVD_11190 f14c09c5fff3a7326d11a2fcf0cacd9f 753 SUPERFAMILY SSF56719 37 489 5.62E-154 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TVD_11190 f14c09c5fff3a7326d11a2fcf0cacd9f 753 Gene3D G3DSA:3.90.199.10 38 487 1.3E-176 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 TVD_11190 f14c09c5fff3a7326d11a2fcf0cacd9f 753 SUPERFAMILY SSF101904 507 745 6.54E-46 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TVD_11190 f14c09c5fff3a7326d11a2fcf0cacd9f 753 Gene3D G3DSA:2.120.10.90 506 741 1.5E-11 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TVD_11190 f14c09c5fff3a7326d11a2fcf0cacd9f 753 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 15 747 0.0 T 11-10-2018 TVD_11190 f14c09c5fff3a7326d11a2fcf0cacd9f 753 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 10 749 34.051 T 11-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_11190 f14c09c5fff3a7326d11a2fcf0cacd9f 753 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 651 702 1.9E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TVD_11190 f14c09c5fff3a7326d11a2fcf0cacd9f 753 Gene3D G3DSA:3.30.1360.40 244 337 1.3E-176 T 11-10-2018 TVD_11190 f14c09c5fff3a7326d11a2fcf0cacd9f 753 SMART SM00434 17 467 1.7E-231 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TVD_11190 f14c09c5fff3a7326d11a2fcf0cacd9f 753 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 38 469 1.3E-131 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TVD_11190 f14c09c5fff3a7326d11a2fcf0cacd9f 753 Gene3D G3DSA:1.10.268.10 375 460 1.3E-176 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TVD_08085 4251064fcc8b7a6920451186acecc6ef 182 Gene3D G3DSA:3.30.300.20 11 171 3.2E-35 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TVD_08085 4251064fcc8b7a6920451186acecc6ef 182 Pfam PF02566 OsmC-like protein 72 180 2.1E-22 T 11-10-2018 IPR003718 OsmC/Ohr family TVD_08085 4251064fcc8b7a6920451186acecc6ef 182 SUPERFAMILY SSF82784 16 181 5.76E-34 T 11-10-2018 IPR036102 OsmC/Ohr superfamily TVD_04080 61de29ccf7ef60d527c8224d97344fe5 187 Gene3D G3DSA:3.30.420.10 1 182 4.1E-69 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TVD_04080 61de29ccf7ef60d527c8224d97344fe5 187 SUPERFAMILY SSF53098 3 180 6.9E-43 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_04080 61de29ccf7ef60d527c8224d97344fe5 187 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 42.816 T 11-10-2018 IPR022894 Oligoribonuclease GO:0000175 TVD_04080 61de29ccf7ef60d527c8224d97344fe5 187 Pfam PF00929 Exonuclease 9 170 1.2E-32 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TVD_04080 61de29ccf7ef60d527c8224d97344fe5 187 SMART SM00479 7 180 4.2E-18 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 PIRSF PIRSF001174 3 792 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 18 210 6.0E-40 T 11-10-2018 IPR003111 Lon, substrate-binding domain TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 Gene3D G3DSA:1.10.8.60 505 601 1.2E-31 T 11-10-2018 TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 SUPERFAMILY SSF54211 612 787 1.21E-58 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 SUPERFAMILY SSF52540 328 603 8.77E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 370 389 5.5E-56 T 11-10-2018 TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 612 628 5.5E-56 T 11-10-2018 TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 690 709 5.5E-56 T 11-10-2018 TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 720 739 5.5E-56 T 11-10-2018 TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 743 761 5.5E-56 T 11-10-2018 TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 TIGRFAM TIGR00763 lon: endopeptidase La 20 788 2.2E-300 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 Gene3D G3DSA:2.30.130.40 13 127 2.7E-30 T 11-10-2018 TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 SMART SM00382 362 506 2.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 Gene3D G3DSA:3.40.50.300 327 504 4.6E-61 T 11-10-2018 TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 Gene3D G3DSA:3.30.230.10 603 789 5.7E-82 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 SUPERFAMILY SSF88697 17 215 2.49E-45 T 11-10-2018 IPR015947 PUA-like superfamily TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 366 503 2.8E-16 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 Hamap MF_01973 Lon protease [lon]. 18 789 71.656 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 587 789 2.0E-98 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 Gene3D G3DSA:1.20.58.1480 135 258 1.9E-42 T 11-10-2018 TVD_10335 e271d39c6abef8570de3c9e203a4a0ca 821 SMART SM00464 17 216 5.3E-70 T 11-10-2018 IPR003111 Lon, substrate-binding domain TVD_07775 e1657873321a59d0256e99ec1a420a77 117 Pfam PF03960 ArsC family 7 110 3.6E-16 T 11-10-2018 IPR006660 Arsenate reductase-like TVD_07775 e1657873321a59d0256e99ec1a420a77 117 Gene3D G3DSA:3.40.30.10 3 114 2.1E-40 T 11-10-2018 TVD_07775 e1657873321a59d0256e99ec1a420a77 117 SUPERFAMILY SSF52833 4 114 2.09E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_07775 e1657873321a59d0256e99ec1a420a77 117 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 4 110 7.3E-28 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR TVD_13755 f87a39bba62b01bf6b6466ff376e5a47 178 Gene3D G3DSA:1.10.10.10 20 166 1.8E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_13755 f87a39bba62b01bf6b6466ff376e5a47 178 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 3.4E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TVD_13755 f87a39bba62b01bf6b6466ff376e5a47 178 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 3.4E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TVD_13755 f87a39bba62b01bf6b6466ff376e5a47 178 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 3.4E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TVD_13755 f87a39bba62b01bf6b6466ff376e5a47 178 SUPERFAMILY SSF46785 24 164 2.77E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_13755 f87a39bba62b01bf6b6466ff376e5a47 178 Pfam PF01047 MarR family 55 113 7.2E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TVD_13755 f87a39bba62b01bf6b6466ff376e5a47 178 SMART SM00347 48 148 1.2E-18 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TVD_09185 acf71e7095a8b2f8a0c11fb766ecd8cb 414 Pfam PF00696 Amino acid kinase family 3 229 3.3E-53 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TVD_09185 acf71e7095a8b2f8a0c11fb766ecd8cb 414 Gene3D G3DSA:3.30.70.260 254 403 4.6E-59 T 11-10-2018 TVD_09185 acf71e7095a8b2f8a0c11fb766ecd8cb 414 Gene3D G3DSA:3.30.70.260 261 338 4.6E-59 T 11-10-2018 TVD_09185 acf71e7095a8b2f8a0c11fb766ecd8cb 414 Pfam PF13840 ACT domain 338 399 4.3E-16 T 11-10-2018 IPR027795 CASTOR, ACT domain TVD_09185 acf71e7095a8b2f8a0c11fb766ecd8cb 414 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 403 6.0E-134 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TVD_09185 acf71e7095a8b2f8a0c11fb766ecd8cb 414 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 64 402 6.5E-123 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TVD_09185 acf71e7095a8b2f8a0c11fb766ecd8cb 414 SUPERFAMILY SSF55021 329 405 3.62E-25 T 11-10-2018 TVD_09185 acf71e7095a8b2f8a0c11fb766ecd8cb 414 Pfam PF01842 ACT domain 267 325 7.6E-11 T 11-10-2018 IPR002912 ACT domain TVD_09185 acf71e7095a8b2f8a0c11fb766ecd8cb 414 PIRSF PIRSF000726 1 63 1.3E-19 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TVD_09185 acf71e7095a8b2f8a0c11fb766ecd8cb 414 PIRSF PIRSF000726 60 410 7.4E-147 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TVD_09185 acf71e7095a8b2f8a0c11fb766ecd8cb 414 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TVD_09185 acf71e7095a8b2f8a0c11fb766ecd8cb 414 SUPERFAMILY SSF55021 249 326 1.22E-18 T 11-10-2018 TVD_09185 acf71e7095a8b2f8a0c11fb766ecd8cb 414 SUPERFAMILY SSF53633 4 243 5.76E-76 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TVD_09185 acf71e7095a8b2f8a0c11fb766ecd8cb 414 Gene3D G3DSA:3.40.1160.10 1 253 3.1E-91 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 Pfam PF09414 RNA ligase 72 225 1.9E-10 T 11-10-2018 IPR021122 RNA ligase domain, REL/Rln2 TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 PRINTS PR01048 Hypothetical protein Y414 family signature 51 69 5.4E-39 T 11-10-2018 IPR001072 RNA ligase, Pab1020 family TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 PRINTS PR01048 Hypothetical protein Y414 family signature 29 43 5.4E-39 T 11-10-2018 IPR001072 RNA ligase, Pab1020 family TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 PRINTS PR01048 Hypothetical protein Y414 family signature 246 264 5.4E-39 T 11-10-2018 IPR001072 RNA ligase, Pab1020 family TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 PRINTS PR01048 Hypothetical protein Y414 family signature 205 218 5.4E-39 T 11-10-2018 IPR001072 RNA ligase, Pab1020 family TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 PRINTS PR01048 Hypothetical protein Y414 family signature 150 171 5.4E-39 T 11-10-2018 IPR001072 RNA ligase, Pab1020 family TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 PRINTS PR01048 Hypothetical protein Y414 family signature 94 109 5.4E-39 T 11-10-2018 IPR001072 RNA ligase, Pab1020 family TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 PRINTS PR01048 Hypothetical protein Y414 family signature 124 139 5.4E-39 T 11-10-2018 IPR001072 RNA ligase, Pab1020 family TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 PRINTS PR01048 Hypothetical protein Y414 family signature 275 289 5.4E-39 T 11-10-2018 IPR001072 RNA ligase, Pab1020 family TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 PRINTS PR01048 Hypothetical protein Y414 family signature 342 362 5.4E-39 T 11-10-2018 IPR001072 RNA ligase, Pab1020 family TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 PRINTS PR01048 Hypothetical protein Y414 family signature 73 86 5.4E-39 T 11-10-2018 IPR001072 RNA ligase, Pab1020 family TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 SUPERFAMILY SSF56091 49 241 1.46E-25 T 11-10-2018 TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 Gene3D G3DSA:3.30.470.30 82 183 6.2E-60 T 11-10-2018 TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 Gene3D G3DSA:3.30.70.2160 228 367 1.3E-42 T 11-10-2018 TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 TIGRFAM TIGR01209 TIGR01209: RNA ligase, Pab1020 family 7 366 2.1E-81 T 11-10-2018 IPR001072 RNA ligase, Pab1020 family TVD_03320 6f5d65d08f5e6af00762598c770a81af 367 Gene3D G3DSA:3.30.1490.70 57 226 6.2E-60 T 11-10-2018 TVD_11560 ed10b8d228be8f423bd851767f1cfdbf 259 Gene3D G3DSA:3.40.47.10 14 163 3.7E-5 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TVD_11560 ed10b8d228be8f423bd851767f1cfdbf 259 SUPERFAMILY SSF53901 34 150 5.33E-8 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TVD_11560 ed10b8d228be8f423bd851767f1cfdbf 259 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 40 237 3.0E-30 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TVD_01135 5ad6fe53b320768f7f901aeea329f297 393 Gene3D G3DSA:3.40.50.80 254 391 1.7E-27 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_01135 5ad6fe53b320768f7f901aeea329f297 393 Pfam PF00042 Globin 6 103 5.3E-11 T 11-10-2018 IPR000971 Globin GO:0020037 TVD_01135 5ad6fe53b320768f7f901aeea329f297 393 SUPERFAMILY SSF52343 256 388 3.93E-32 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_01135 5ad6fe53b320768f7f901aeea329f297 393 SUPERFAMILY SSF46458 1 142 8.15E-41 T 11-10-2018 IPR009050 Globin-like superfamily TVD_01135 5ad6fe53b320768f7f901aeea329f297 393 Pfam PF00970 Oxidoreductase FAD-binding domain 160 253 6.5E-9 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 TVD_01135 5ad6fe53b320768f7f901aeea329f297 393 Pfam PF00175 Oxidoreductase NAD-binding domain 264 367 2.2E-10 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TVD_01135 5ad6fe53b320768f7f901aeea329f297 393 Gene3D G3DSA:2.40.30.10 152 253 2.4E-33 T 11-10-2018 TVD_01135 5ad6fe53b320768f7f901aeea329f297 393 Gene3D G3DSA:1.10.490.10 1 145 3.1E-53 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TVD_01135 5ad6fe53b320768f7f901aeea329f297 393 PRINTS PR00409 Phthalate dioxygenase reductase family signature 241 255 1.1E-6 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 TVD_01135 5ad6fe53b320768f7f901aeea329f297 393 PRINTS PR00409 Phthalate dioxygenase reductase family signature 180 190 1.1E-6 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 TVD_01135 5ad6fe53b320768f7f901aeea329f297 393 PRINTS PR00409 Phthalate dioxygenase reductase family signature 227 241 1.1E-6 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 TVD_01135 5ad6fe53b320768f7f901aeea329f297 393 PRINTS PR00409 Phthalate dioxygenase reductase family signature 263 282 1.1E-6 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 TVD_01135 5ad6fe53b320768f7f901aeea329f297 393 SUPERFAMILY SSF63380 151 253 1.87E-28 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TVD_12890 36fa625851c954d4f305a86af760f312 86 Pfam PF04380 Membrane fusogenic activity 1 78 4.8E-28 T 11-10-2018 IPR007475 Membrane fusogenic activity TVD_00970 ddcdc021daa7dd99dd594671114309e9 307 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 138 304 1.1E-46 T 11-10-2018 IPR000160 GGDEF domain TVD_00970 ddcdc021daa7dd99dd594671114309e9 307 SMART SM00267 126 306 2.7E-52 T 11-10-2018 IPR000160 GGDEF domain TVD_00970 ddcdc021daa7dd99dd594671114309e9 307 Gene3D G3DSA:3.30.70.270 129 305 1.4E-54 T 11-10-2018 TVD_00970 ddcdc021daa7dd99dd594671114309e9 307 SUPERFAMILY SSF55781 89 135 3.34E-5 T 11-10-2018 TVD_00970 ddcdc021daa7dd99dd594671114309e9 307 SUPERFAMILY SSF55073 142 304 6.67E-46 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_00970 ddcdc021daa7dd99dd594671114309e9 307 Pfam PF00990 Diguanylate cyclase, GGDEF domain 139 302 5.1E-44 T 11-10-2018 IPR000160 GGDEF domain TVD_12075 c90562da083532e68050f6424ffb559e 233 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 174 9.6E-45 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 TVD_12075 c90562da083532e68050f6424ffb559e 233 Pfam PF01386 Ribosomal L25p family 7 94 4.1E-24 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 TVD_12075 c90562da083532e68050f6424ffb559e 233 Gene3D G3DSA:2.40.240.10 4 97 2.7E-31 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TVD_12075 c90562da083532e68050f6424ffb559e 233 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 192 1.6E-28 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain TVD_12075 c90562da083532e68050f6424ffb559e 233 SUPERFAMILY SSF50715 3 199 8.2E-55 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TVD_12075 c90562da083532e68050f6424ffb559e 233 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 5 97 24.826 T 11-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 TVD_12075 c90562da083532e68050f6424ffb559e 233 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 9 97 1.0E-22 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 TVD_12075 c90562da083532e68050f6424ffb559e 233 Gene3D G3DSA:2.170.120.20 99 201 9.9E-26 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal TVD_12075 c90562da083532e68050f6424ffb559e 233 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 191 31.148 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 Gene3D G3DSA:3.30.450.20 319 390 2.4E-9 T 11-10-2018 TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 192 318 3.4E-20 T 11-10-2018 IPR000014 PAS domain TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 113 191 2.0E-7 T 11-10-2018 IPR000014 PAS domain TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 Pfam PF13426 PAS domain 207 308 8.5E-8 T 11-10-2018 IPR000014 PAS domain TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 Pfam PF08447 PAS fold 91 176 1.0E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 SMART SM00091 66 135 5.5 T 11-10-2018 IPR000014 PAS domain TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 SMART SM00091 196 263 0.0032 T 11-10-2018 IPR000014 PAS domain TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 Gene3D G3DSA:3.30.450.20 182 308 1.7E-27 T 11-10-2018 TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 642 652 9.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 657 675 9.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 624 638 9.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 681 694 9.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 SMART SM00387 585 695 6.0E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 SUPERFAMILY SSF55874 533 695 1.19E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 SUPERFAMILY SSF55785 181 308 2.74E-23 T 11-10-2018 IPR035965 PAS domain superfamily TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 SUPERFAMILY SSF47384 459 542 1.8E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 SMART SM00086 142 184 0.12 T 11-10-2018 IPR001610 PAC motif TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 SMART SM00086 271 311 1.0 T 11-10-2018 IPR001610 PAC motif TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 SUPERFAMILY SSF55785 308 439 9.52E-6 T 11-10-2018 IPR035965 PAS domain superfamily TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 586 694 7.2E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 Gene3D G3DSA:1.10.287.130 438 541 5.5E-18 T 11-10-2018 TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 SUPERFAMILY SSF55785 82 187 2.62E-17 T 11-10-2018 IPR035965 PAS domain superfamily TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 SMART SM00388 475 543 1.0E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 Pfam PF00512 His Kinase A (phospho-acceptor) domain 477 542 5.4E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 Gene3D G3DSA:3.30.565.10 544 695 2.4E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_09770 2f6c9dcefaac8b39d7f949b507c8294f 695 Gene3D G3DSA:3.30.450.20 64 181 3.9E-20 T 11-10-2018 TVD_03280 14344f8f9b513d4760b0cb4db44f8455 428 SUPERFAMILY SSF82689 283 377 2.62E-9 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 TVD_03280 14344f8f9b513d4760b0cb4db44f8455 428 Pfam PF00924 Mechanosensitive ion channel 175 371 3.3E-34 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TVD_03280 14344f8f9b513d4760b0cb4db44f8455 428 SUPERFAMILY SSF50182 215 281 3.27E-16 T 11-10-2018 IPR010920 LSM domain superfamily TVD_03280 14344f8f9b513d4760b0cb4db44f8455 428 Pfam PF04972 BON domain 38 102 1.1E-8 T 11-10-2018 IPR007055 BON domain TVD_03280 14344f8f9b513d4760b0cb4db44f8455 428 Gene3D G3DSA:2.30.30.60 231 280 6.3E-15 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily TVD_03280 14344f8f9b513d4760b0cb4db44f8455 428 Gene3D G3DSA:3.30.70.100 282 376 1.6E-8 T 11-10-2018 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 Gene3D G3DSA:1.20.1640.10 520 1033 4.9E-295 T 11-10-2018 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 Gene3D G3DSA:3.30.2090.10 728 816 4.9E-295 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_01005 b541551a2f9a947077a8b1b146172238 1059 SUPERFAMILY SSF82693 573 678 2.67E-12 T 11-10-2018 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 SUPERFAMILY SSF82866 812 1039 4.32E-53 T 11-10-2018 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 SUPERFAMILY SSF82714 193 276 3.27E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_01005 b541551a2f9a947077a8b1b146172238 1059 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 1.5E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 PRINTS PR00702 Acriflavin resistance protein family signature 370 391 1.5E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 PRINTS PR00702 Acriflavin resistance protein family signature 48 66 1.5E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 PRINTS PR00702 Acriflavin resistance protein family signature 398 422 1.5E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 PRINTS PR00702 Acriflavin resistance protein family signature 559 576 1.5E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 1.5E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 PRINTS PR00702 Acriflavin resistance protein family signature 343 366 1.5E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 PRINTS PR00702 Acriflavin resistance protein family signature 20 44 1.5E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 Gene3D G3DSA:3.30.2090.10 188 280 4.9E-295 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_01005 b541551a2f9a947077a8b1b146172238 1059 Gene3D G3DSA:1.20.1640.10 20 519 4.9E-295 T 11-10-2018 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 Gene3D G3DSA:3.30.70.1440 676 875 4.9E-295 T 11-10-2018 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 SUPERFAMILY SSF82693 152 336 1.1E-14 T 11-10-2018 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 Gene3D G3DSA:3.30.70.1430 574 675 4.9E-295 T 11-10-2018 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 Gene3D G3DSA:3.30.70.1320 144 339 4.9E-295 T 11-10-2018 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 SUPERFAMILY SSF82714 729 814 8.37E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_01005 b541551a2f9a947077a8b1b146172238 1059 SUPERFAMILY SSF82866 301 504 4.71E-40 T 11-10-2018 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 Gene3D G3DSA:3.30.70.1430 50 824 4.9E-295 T 11-10-2018 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 SUPERFAMILY SSF82693 50 144 3.66E-20 T 11-10-2018 TVD_01005 b541551a2f9a947077a8b1b146172238 1059 Pfam PF00873 AcrB/AcrD/AcrF family 14 1036 8.7E-269 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_03185 2a124e63de5a26b460ff65d0833a86b8 486 Gene3D G3DSA:3.20.20.70 1 485 2.2E-215 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_03185 2a124e63de5a26b460ff65d0833a86b8 486 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 453 1.3E-197 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 TVD_03185 2a124e63de5a26b460ff65d0833a86b8 486 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 485 85.107 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 TVD_03185 2a124e63de5a26b460ff65d0833a86b8 486 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 TVD_03185 2a124e63de5a26b460ff65d0833a86b8 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 472 1.1E-165 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 TVD_03185 2a124e63de5a26b460ff65d0833a86b8 486 Pfam PF00571 CBS domain 147 199 3.1E-5 T 11-10-2018 IPR000644 CBS domain TVD_03185 2a124e63de5a26b460ff65d0833a86b8 486 Pfam PF00571 CBS domain 94 138 9.3E-8 T 11-10-2018 IPR000644 CBS domain TVD_03185 2a124e63de5a26b460ff65d0833a86b8 486 SUPERFAMILY SSF54631 93 201 2.78E-26 T 11-10-2018 TVD_03185 2a124e63de5a26b460ff65d0833a86b8 486 SMART SM01240 6 472 0.0 T 11-10-2018 TVD_03185 2a124e63de5a26b460ff65d0833a86b8 486 PIRSF PIRSF000130 1 486 8.6E-206 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 TVD_03185 2a124e63de5a26b460ff65d0833a86b8 486 SMART SM00116 95 142 7.6E-6 T 11-10-2018 IPR000644 CBS domain TVD_03185 2a124e63de5a26b460ff65d0833a86b8 486 SMART SM00116 156 204 4.2E-8 T 11-10-2018 IPR000644 CBS domain TVD_03185 2a124e63de5a26b460ff65d0833a86b8 486 SUPERFAMILY SSF51412 2 476 1.57E-127 T 11-10-2018 TVD_11995 516dd49cebc3e38535dec279b7034f5d 128 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 9.0E-30 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TVD_11995 516dd49cebc3e38535dec279b7034f5d 128 Pfam PF00085 Thioredoxin 3 98 3.5E-26 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 TVD_11995 516dd49cebc3e38535dec279b7034f5d 128 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TVD_11995 516dd49cebc3e38535dec279b7034f5d 128 PIRSF PIRSF000077 1 104 2.3E-28 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TVD_11995 516dd49cebc3e38535dec279b7034f5d 128 Gene3D G3DSA:3.40.30.10 1 124 2.6E-30 T 11-10-2018 TVD_11995 516dd49cebc3e38535dec279b7034f5d 128 SUPERFAMILY SSF52833 2 103 1.02E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_11995 516dd49cebc3e38535dec279b7034f5d 128 PRINTS PR00421 Thioredoxin family signature 21 29 1.5E-8 T 11-10-2018 TVD_11995 516dd49cebc3e38535dec279b7034f5d 128 PRINTS PR00421 Thioredoxin family signature 68 79 1.5E-8 T 11-10-2018 TVD_11995 516dd49cebc3e38535dec279b7034f5d 128 PRINTS PR00421 Thioredoxin family signature 29 38 1.5E-8 T 11-10-2018 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 SUPERFAMILY SSF54980 410 487 1.01E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 SMART SM00838 606 693 3.4E-54 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 Gene3D G3DSA:3.30.70.240 610 680 1.1E-92 T 11-10-2018 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 Pfam PF00679 Elongation factor G C-terminus 606 691 1.7E-31 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 SMART SM00889 486 604 1.1E-77 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 1.6E-32 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 Gene3D G3DSA:3.30.230.10 490 693 1.1E-92 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 SUPERFAMILY SSF54980 606 693 1.29E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 Pfam PF03764 Elongation factor G, domain IV 485 603 3.8E-48 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 SUPERFAMILY SSF54211 485 604 1.31E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 112.747 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 Gene3D G3DSA:3.40.50.300 1 299 3.6E-116 T 11-10-2018 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 Pfam PF00009 Elongation factor Tu GTP binding domain 8 288 6.7E-67 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 Gene3D G3DSA:3.30.70.870 412 489 1.4E-33 T 11-10-2018 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.1E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.1E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.1E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.1E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.1E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 Pfam PF14492 Elongation Factor G, domain II 410 484 8.8E-36 T 11-10-2018 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 SUPERFAMILY SSF52540 6 288 2.51E-107 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 696 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 Pfam PF03144 Elongation factor Tu domain 2 330 397 3.3E-14 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 SUPERFAMILY SSF50447 271 410 6.19E-37 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TVD_02345 1956b901e8d5edbfe21a441fb6367230 698 Gene3D G3DSA:2.40.30.10 300 411 2.5E-43 T 11-10-2018 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 Gene3D G3DSA:2.40.30.130 462 546 2.1E-11 T 11-10-2018 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 SUPERFAMILY SSF55186 548 700 9.29E-48 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 Pfam PF02272 DHHA1 domain 725 865 1.5E-28 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 Gene3D G3DSA:3.30.930.10 1 246 8.9E-117 T 11-10-2018 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 PRINTS PR00980 Alanyl-tRNA synthetase signature 230 243 9.8E-33 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 PRINTS PR00980 Alanyl-tRNA synthetase signature 300 313 9.8E-33 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 9.8E-33 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 PRINTS PR00980 Alanyl-tRNA synthetase signature 276 292 9.8E-33 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 PRINTS PR00980 Alanyl-tRNA synthetase signature 203 214 9.8E-33 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 Gene3D G3DSA:3.30.54.20 618 670 4.5E-51 T 11-10-2018 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 Gene3D G3DSA:3.10.310.40 757 866 1.9E-30 T 11-10-2018 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 Pfam PF01411 tRNA synthetases class II (A) 5 547 6.7E-222 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 Gene3D G3DSA:3.30.980.10 556 690 4.5E-51 T 11-10-2018 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 848 0.0 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 SUPERFAMILY SSF55681 2 249 5.96E-109 T 11-10-2018 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 SUPERFAMILY SSF101353 250 458 3.27E-60 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 SUPERFAMILY SSF50447 449 546 6.36E-17 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 869 197.627 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 SMART SM00863 647 689 3.1E-20 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TVD_09190 52e820fa5740e2d84c80b0d7a9920d53 869 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 647 689 7.5E-18 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TVD_12240 ea527bbeb1760df58d66aa46fe2228bd 306 Pfam PF01063 Amino-transferase class IV 36 267 6.6E-50 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 TVD_12240 ea527bbeb1760df58d66aa46fe2228bd 306 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 TVD_12240 ea527bbeb1760df58d66aa46fe2228bd 306 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 3.8E-136 T 11-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 TVD_12240 ea527bbeb1760df58d66aa46fe2228bd 306 Gene3D G3DSA:3.20.10.10 132 303 9.5E-57 T 11-10-2018 TVD_12240 ea527bbeb1760df58d66aa46fe2228bd 306 SUPERFAMILY SSF56752 1 303 1.02E-103 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 TVD_12240 ea527bbeb1760df58d66aa46fe2228bd 306 Gene3D G3DSA:3.30.470.10 2 130 1.6E-38 T 11-10-2018 TVD_12745 c067db274975a9edd34045e8721ffc02 304 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 254 1.1E-18 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 TVD_12745 c067db274975a9edd34045e8721ffc02 304 SMART SM00279 170 205 5.8E-13 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 TVD_12745 c067db274975a9edd34045e8721ffc02 304 SMART SM00475 2 264 8.8E-49 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 TVD_12745 c067db274975a9edd34045e8721ffc02 304 SUPERFAMILY SSF88723 3 152 3.43E-34 T 11-10-2018 IPR029060 PIN-like domain superfamily TVD_12745 c067db274975a9edd34045e8721ffc02 304 SUPERFAMILY SSF47807 168 254 1.94E-17 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily TVD_12745 c067db274975a9edd34045e8721ffc02 304 Gene3D G3DSA:3.40.50.1010 5 254 1.9E-58 T 11-10-2018 TVD_12745 c067db274975a9edd34045e8721ffc02 304 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 165 3.8E-33 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 TVD_12745 c067db274975a9edd34045e8721ffc02 304 Gene3D G3DSA:1.10.150.20 171 250 1.9E-58 T 11-10-2018 TVD_00680 8b7f072ab7bbd1965180d639528090e7 446 Gene3D G3DSA:1.20.1250.20 251 445 2.4E-14 T 11-10-2018 TVD_00680 8b7f072ab7bbd1965180d639528090e7 446 Pfam PF07690 Major Facilitator Superfamily 272 442 9.8E-10 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TVD_00680 8b7f072ab7bbd1965180d639528090e7 446 SUPERFAMILY SSF103473 66 443 9.16E-21 T 11-10-2018 IPR036259 MFS transporter superfamily TVD_00350 4afa26f72bb3e401367e8eef1455c312 374 Pfam PF13692 Glycosyl transferases group 1 193 330 3.0E-29 T 11-10-2018 TVD_00350 4afa26f72bb3e401367e8eef1455c312 374 TIGRFAM TIGR03088 stp2: sugar transferase, PEP-CTERM/EpsH1 system associated 1 371 5.0E-151 T 11-10-2018 IPR017522 Sugar transferase, PEP-CTERM, Stp2 TVD_00350 4afa26f72bb3e401367e8eef1455c312 374 Gene3D G3DSA:3.40.50.2000 166 354 5.6E-65 T 11-10-2018 TVD_00350 4afa26f72bb3e401367e8eef1455c312 374 Pfam PF13439 Glycosyltransferase Family 4 10 170 3.4E-20 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TVD_00350 4afa26f72bb3e401367e8eef1455c312 374 SUPERFAMILY SSF53756 1 370 1.36E-75 T 11-10-2018 TVD_00350 4afa26f72bb3e401367e8eef1455c312 374 Gene3D G3DSA:3.40.50.2000 10 363 5.6E-65 T 11-10-2018 TVD_05550 16d9ba6eeea5e4a05b455c3e5e630622 195 SUPERFAMILY SSF141523 25 182 2.09E-23 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like TVD_05550 16d9ba6eeea5e4a05b455c3e5e630622 195 Pfam PF03734 L,D-transpeptidase catalytic domain 26 181 1.3E-16 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 TVD_05550 16d9ba6eeea5e4a05b455c3e5e630622 195 Gene3D G3DSA:2.40.440.10 4 191 2.6E-27 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like TVD_07795 60659b0eb0066193e49c2f52bd63bc98 268 Pfam PF02237 Biotin protein ligase C terminal domain 219 263 4.2E-6 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TVD_07795 60659b0eb0066193e49c2f52bd63bc98 268 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 26 262 7.9E-41 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TVD_07795 60659b0eb0066193e49c2f52bd63bc98 268 SUPERFAMILY SSF50037 226 263 6.41E-5 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal TVD_07795 60659b0eb0066193e49c2f52bd63bc98 268 SUPERFAMILY SSF55681 25 209 4.1E-39 T 11-10-2018 TVD_07795 60659b0eb0066193e49c2f52bd63bc98 268 Pfam PF03099 Biotin/lipoate A/B protein ligase family 29 154 2.2E-17 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TVD_07795 60659b0eb0066193e49c2f52bd63bc98 268 Gene3D G3DSA:3.30.930.10 15 215 8.7E-44 T 11-10-2018 TVD_07795 60659b0eb0066193e49c2f52bd63bc98 268 Gene3D G3DSA:2.30.30.100 219 264 2.1E-8 T 11-10-2018 TVD_11160 3bccbb2691143f18273220d3a8b6c633 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 TVD_11160 3bccbb2691143f18273220d3a8b6c633 142 PIRSF PIRSF002181 1 142 1.1E-50 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TVD_11160 3bccbb2691143f18273220d3a8b6c633 142 Gene3D G3DSA:3.90.1180.10 1 142 5.4E-65 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 TVD_11160 3bccbb2691143f18273220d3a8b6c633 142 Pfam PF00572 Ribosomal protein L13 15 138 1.1E-58 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TVD_11160 3bccbb2691143f18273220d3a8b6c633 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 29.272 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TVD_11160 3bccbb2691143f18273220d3a8b6c633 142 SUPERFAMILY SSF52161 1 139 1.83E-61 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 TVD_11160 3bccbb2691143f18273220d3a8b6c633 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 4.2E-65 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 SUPERFAMILY SSF52016 655 913 2.94E-86 T 11-10-2018 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 PRINTS PR00415 Aconitase family signature 199 212 4.2E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 PRINTS PR00415 Aconitase family signature 369 383 4.2E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 PRINTS PR00415 Aconitase family signature 165 173 4.2E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 PRINTS PR00415 Aconitase family signature 213 228 4.2E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 PRINTS PR00415 Aconitase family signature 517 530 4.2E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 PRINTS PR00415 Aconitase family signature 141 154 4.2E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 PRINTS PR00415 Aconitase family signature 275 288 4.2E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 PRINTS PR00415 Aconitase family signature 455 466 4.2E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 PRINTS PR00415 Aconitase family signature 289 302 4.2E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 ProSitePatterns PS01244 Aconitase family signature 2. 517 530 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 Gene3D G3DSA:1.10.1440.20 615 676 5.6E-18 T 11-10-2018 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 ProSitePatterns PS00450 Aconitase family signature 1. 451 467 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 Gene3D G3DSA:3.30.499.20 7 369 3.2E-158 T 11-10-2018 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 Pfam PF00330 Aconitase family (aconitate hydratase) 64 586 5.8E-184 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 SUPERFAMILY SSF53732 22 651 4.05E-220 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 Pfam PF00694 Aconitase C-terminal domain 716 842 3.7E-46 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 Gene3D G3DSA:3.20.19.10 678 915 7.2E-106 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 27 913 0.0 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 TVD_06775 b887f794c56808cf1420dcf70d3d5151 917 Gene3D G3DSA:3.30.499.10 370 614 2.9E-99 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 TVD_08450 483a57e570fee202f1c8633ada14c6ae 452 Pfam PF01769 Divalent cation transporter 321 440 3.0E-27 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 TVD_08450 483a57e570fee202f1c8633ada14c6ae 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 9 448 2.1E-94 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 TVD_08450 483a57e570fee202f1c8633ada14c6ae 452 SMART SM00116 205 253 0.0016 T 11-10-2018 IPR000644 CBS domain TVD_08450 483a57e570fee202f1c8633ada14c6ae 452 SMART SM00116 141 193 31.0 T 11-10-2018 IPR000644 CBS domain TVD_08450 483a57e570fee202f1c8633ada14c6ae 452 Pfam PF00571 CBS domain 134 193 1.3E-6 T 11-10-2018 IPR000644 CBS domain TVD_08450 483a57e570fee202f1c8633ada14c6ae 452 Pfam PF00571 CBS domain 205 252 2.8E-6 T 11-10-2018 IPR000644 CBS domain TVD_08450 483a57e570fee202f1c8633ada14c6ae 452 SUPERFAMILY SSF161093 278 447 6.41E-47 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 TVD_08450 483a57e570fee202f1c8633ada14c6ae 452 Gene3D G3DSA:1.25.60.10 4 128 7.0E-20 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily TVD_08450 483a57e570fee202f1c8633ada14c6ae 452 Gene3D G3DSA:1.10.357.20 273 447 1.0E-53 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain TVD_08450 483a57e570fee202f1c8633ada14c6ae 452 SUPERFAMILY SSF158791 9 131 1.44E-22 T 11-10-2018 TVD_08450 483a57e570fee202f1c8633ada14c6ae 452 SUPERFAMILY SSF54631 133 266 6.57E-25 T 11-10-2018 TVD_08450 483a57e570fee202f1c8633ada14c6ae 452 SMART SM00924 31 134 7.7E-23 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain TVD_08450 483a57e570fee202f1c8633ada14c6ae 452 Pfam PF03448 MgtE intracellular N domain 31 132 1.9E-19 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain TVD_08450 483a57e570fee202f1c8633ada14c6ae 452 Gene3D G3DSA:3.10.580.10 130 257 7.8E-31 T 11-10-2018 TVD_00180 105da6c296cb6082b18a5d2e08d4baca 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 29.85 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 TVD_00180 105da6c296cb6082b18a5d2e08d4baca 91 Gene3D G3DSA:1.10.3880.10 1 91 4.8E-41 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 TVD_00180 105da6c296cb6082b18a5d2e08d4baca 91 SUPERFAMILY SSF111148 1 89 1.57E-40 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 TVD_00180 105da6c296cb6082b18a5d2e08d4baca 91 PIRSF PIRSF029827 1 90 7.5E-42 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 TVD_00180 105da6c296cb6082b18a5d2e08d4baca 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 63 6.0E-25 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 TVD_00180 105da6c296cb6082b18a5d2e08d4baca 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.1E-44 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 TVD_01080 fcba88d20cf1b965726e908b75476e00 370 Gene3D G3DSA:2.40.30.170 63 280 1.0E-72 T 11-10-2018 TVD_01080 fcba88d20cf1b965726e908b75476e00 370 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 351 8.7E-68 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TVD_01080 fcba88d20cf1b965726e908b75476e00 370 SUPERFAMILY SSF111369 63 276 1.09E-39 T 11-10-2018 TVD_01080 fcba88d20cf1b965726e908b75476e00 370 Gene3D G3DSA:2.40.420.20 281 349 1.0E-72 T 11-10-2018 TVD_01080 fcba88d20cf1b965726e908b75476e00 370 Gene3D G3DSA:1.10.287.470 108 167 1.0E-72 T 11-10-2018 TVD_01080 fcba88d20cf1b965726e908b75476e00 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 271 1.4E-25 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TVD_01080 fcba88d20cf1b965726e908b75476e00 370 Gene3D G3DSA:2.40.50.100 73 201 1.0E-72 T 11-10-2018 TVD_06525 0296140c4d099f53efcf71cbbd602696 98 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.837 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 TVD_06525 0296140c4d099f53efcf71cbbd602696 98 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 5.6E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TVD_06525 0296140c4d099f53efcf71cbbd602696 98 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 5.6E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TVD_06525 0296140c4d099f53efcf71cbbd602696 98 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 5.6E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TVD_06525 0296140c4d099f53efcf71cbbd602696 98 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.7E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TVD_06525 0296140c4d099f53efcf71cbbd602696 98 Gene3D G3DSA:4.10.520.10 1 93 1.2E-33 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TVD_06525 0296140c4d099f53efcf71cbbd602696 98 SUPERFAMILY SSF47729 1 91 1.03E-31 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TVD_06525 0296140c4d099f53efcf71cbbd602696 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 TVD_06525 0296140c4d099f53efcf71cbbd602696 98 SMART SM00411 1 91 1.4E-41 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TVD_06525 0296140c4d099f53efcf71cbbd602696 98 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 5.9E-45 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 TVD_02615 805c2db93be631aef7f7753aaa1f4f06 418 Pfam PF03453 MoeA N-terminal region (domain I and II) 17 177 1.2E-39 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TVD_02615 805c2db93be631aef7f7753aaa1f4f06 418 SUPERFAMILY SSF53218 187 331 6.28E-42 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily TVD_02615 805c2db93be631aef7f7753aaa1f4f06 418 SMART SM00852 190 327 4.6E-39 T 11-10-2018 IPR001453 MoaB/Mog domain TVD_02615 805c2db93be631aef7f7753aaa1f4f06 418 Gene3D G3DSA:3.90.105.10 35 184 2.7E-136 T 11-10-2018 TVD_02615 805c2db93be631aef7f7753aaa1f4f06 418 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 187 323 5.3E-29 T 11-10-2018 IPR001453 MoaB/Mog domain TVD_02615 805c2db93be631aef7f7753aaa1f4f06 418 SUPERFAMILY SSF63867 336 414 1.01E-21 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TVD_02615 805c2db93be631aef7f7753aaa1f4f06 418 Pfam PF03454 MoeA C-terminal region (domain IV) 340 411 5.0E-19 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TVD_02615 805c2db93be631aef7f7753aaa1f4f06 418 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 263 296 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 TVD_02615 805c2db93be631aef7f7753aaa1f4f06 418 Pfam PF00994 Probable molybdopterin binding domain 192 325 4.1E-28 T 11-10-2018 IPR001453 MoaB/Mog domain TVD_02615 805c2db93be631aef7f7753aaa1f4f06 418 Gene3D G3DSA:2.170.190.11 59 151 2.7E-136 T 11-10-2018 TVD_02615 805c2db93be631aef7f7753aaa1f4f06 418 Gene3D G3DSA:2.40.340.10 337 406 2.7E-136 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TVD_02615 805c2db93be631aef7f7753aaa1f4f06 418 SUPERFAMILY SSF63882 17 185 1.44E-49 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TVD_02615 805c2db93be631aef7f7753aaa1f4f06 418 Gene3D G3DSA:3.40.980.10 34 336 2.7E-136 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily TVD_04930 430f8b20ee7232b48a3a827c9d85098c 426 Pfam PF03129 Anticodon binding domain 331 416 1.2E-7 T 11-10-2018 IPR004154 Anticodon-binding TVD_04930 430f8b20ee7232b48a3a827c9d85098c 426 Gene3D G3DSA:3.40.50.800 324 421 2.6E-20 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily TVD_04930 430f8b20ee7232b48a3a827c9d85098c 426 Pfam PF13393 Histidyl-tRNA synthetase 9 310 1.7E-50 T 11-10-2018 TVD_04930 430f8b20ee7232b48a3a827c9d85098c 426 SUPERFAMILY SSF55681 5 316 4.98E-105 T 11-10-2018 TVD_04930 430f8b20ee7232b48a3a827c9d85098c 426 SUPERFAMILY SSF52954 325 422 6.87E-22 T 11-10-2018 TVD_04930 430f8b20ee7232b48a3a827c9d85098c 426 Gene3D G3DSA:3.30.930.10 1 322 2.0E-120 T 11-10-2018 TVD_04930 430f8b20ee7232b48a3a827c9d85098c 426 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 420 32.74 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 TVD_04930 430f8b20ee7232b48a3a827c9d85098c 426 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 407 2.9E-153 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 TVD_04930 430f8b20ee7232b48a3a827c9d85098c 426 PIRSF PIRSF001549 1 423 1.8E-118 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 TVD_00840 eaeb7388321fe5bb470bb98589c0a88a 247 Pfam PF13419 Haloacid dehalogenase-like hydrolase 25 200 5.4E-7 T 11-10-2018 TVD_00840 eaeb7388321fe5bb470bb98589c0a88a 247 SUPERFAMILY SSF56784 18 229 3.93E-30 T 11-10-2018 IPR036412 HAD-like superfamily TVD_00840 eaeb7388321fe5bb470bb98589c0a88a 247 Gene3D G3DSA:3.40.50.1000 21 205 1.1E-20 T 11-10-2018 IPR023214 HAD superfamily TVD_11105 a3b22f70464a87daa56e2885684c002c 277 Pfam PF00149 Calcineurin-like phosphoesterase 4 81 1.7E-10 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TVD_11105 a3b22f70464a87daa56e2885684c002c 277 Gene3D G3DSA:3.60.21.10 1 266 3.5E-70 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TVD_11105 a3b22f70464a87daa56e2885684c002c 277 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 44.138 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 TVD_11105 a3b22f70464a87daa56e2885684c002c 277 SUPERFAMILY SSF56300 1 251 4.38E-52 T 11-10-2018 TVD_11105 a3b22f70464a87daa56e2885684c002c 277 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 259 3.3E-89 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 TVD_11105 a3b22f70464a87daa56e2885684c002c 277 PIRSF PIRSF000903 1 273 2.3E-101 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 TVD_03525 b18fec7c918c62af3857957da893010b 264 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 123 259 5.9E-43 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TVD_03525 b18fec7c918c62af3857957da893010b 264 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 120 4.9E-36 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TVD_03525 b18fec7c918c62af3857957da893010b 264 Gene3D G3DSA:3.40.50.720 4 259 4.6E-99 T 11-10-2018 TVD_03525 b18fec7c918c62af3857957da893010b 264 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 260 35.748 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TVD_03525 b18fec7c918c62af3857957da893010b 264 SUPERFAMILY SSF51735 1 263 2.54E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_03525 b18fec7c918c62af3857957da893010b 264 SUPERFAMILY SSF55347 122 231 7.85E-37 T 11-10-2018 TVD_03525 b18fec7c918c62af3857957da893010b 264 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 145 162 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TVD_03525 b18fec7c918c62af3857957da893010b 264 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 260 2.8E-92 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TVD_03525 b18fec7c918c62af3857957da893010b 264 PIRSF PIRSF000161 1 263 1.1E-87 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TVD_03525 b18fec7c918c62af3857957da893010b 264 Gene3D G3DSA:3.30.360.10 122 229 4.6E-99 T 11-10-2018 TVD_05270 f38ebe9093bad0a387b3cd59e975985a 1169 Gene3D G3DSA:1.10.486.10 472 681 2.2E-187 T 11-10-2018 TVD_05270 f38ebe9093bad0a387b3cd59e975985a 1169 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 3 825 8.7E-277 T 11-10-2018 TVD_05270 f38ebe9093bad0a387b3cd59e975985a 1169 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1124 0.0 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 TVD_05270 f38ebe9093bad0a387b3cd59e975985a 1169 Gene3D G3DSA:3.40.50.300 357 825 2.2E-187 T 11-10-2018 TVD_05270 f38ebe9093bad0a387b3cd59e975985a 1169 Gene3D G3DSA:1.10.10.160 86 206 3.8E-117 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily TVD_05270 f38ebe9093bad0a387b3cd59e975985a 1169 SUPERFAMILY SSF52980 857 1159 7.51E-52 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TVD_05270 f38ebe9093bad0a387b3cd59e975985a 1169 SUPERFAMILY SSF52540 382 828 2.55E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_05270 f38ebe9093bad0a387b3cd59e975985a 1169 Gene3D G3DSA:1.10.10.990 895 972 5.6E-8 T 11-10-2018 TVD_05270 f38ebe9093bad0a387b3cd59e975985a 1169 SUPERFAMILY SSF52540 2 369 1.49E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_05270 f38ebe9093bad0a387b3cd59e975985a 1169 PIRSF PIRSF000980 1 1168 0.0 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 TVD_05270 f38ebe9093bad0a387b3cd59e975985a 1169 Gene3D G3DSA:3.40.50.10930 3 322 3.8E-117 T 11-10-2018 TVD_05270 f38ebe9093bad0a387b3cd59e975985a 1169 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1165 19.682 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 TVD_09145 4db9190ca00b3eb43e3b3be70d00ca7f 964 Pfam PF02867 Ribonucleotide reductase, barrel domain 377 912 2.2E-185 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TVD_09145 4db9190ca00b3eb43e3b3be70d00ca7f 964 PRINTS PR01183 Ribonucleotide reductase large chain signature 625 648 3.0E-45 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TVD_09145 4db9190ca00b3eb43e3b3be70d00ca7f 964 PRINTS PR01183 Ribonucleotide reductase large chain signature 767 794 3.0E-45 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TVD_09145 4db9190ca00b3eb43e3b3be70d00ca7f 964 PRINTS PR01183 Ribonucleotide reductase large chain signature 587 598 3.0E-45 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TVD_09145 4db9190ca00b3eb43e3b3be70d00ca7f 964 PRINTS PR01183 Ribonucleotide reductase large chain signature 452 471 3.0E-45 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TVD_09145 4db9190ca00b3eb43e3b3be70d00ca7f 964 PRINTS PR01183 Ribonucleotide reductase large chain signature 663 685 3.0E-45 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TVD_09145 4db9190ca00b3eb43e3b3be70d00ca7f 964 PRINTS PR01183 Ribonucleotide reductase large chain signature 691 714 3.0E-45 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TVD_09145 4db9190ca00b3eb43e3b3be70d00ca7f 964 SUPERFAMILY SSF51998 376 915 1.56E-184 T 11-10-2018 TVD_09145 4db9190ca00b3eb43e3b3be70d00ca7f 964 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 756 778 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TVD_09145 4db9190ca00b3eb43e3b3be70d00ca7f 964 Gene3D G3DSA:3.20.70.20 227 922 6.8E-254 T 11-10-2018 TVD_09145 4db9190ca00b3eb43e3b3be70d00ca7f 964 Pfam PF03477 ATP cone domain 35 132 3.5E-17 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 TVD_09145 4db9190ca00b3eb43e3b3be70d00ca7f 964 Pfam PF03477 ATP cone domain 154 238 2.1E-6 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 TVD_09145 4db9190ca00b3eb43e3b3be70d00ca7f 964 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 300 371 2.3E-21 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TVD_09145 4db9190ca00b3eb43e3b3be70d00ca7f 964 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 303 915 2.8E-218 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TVD_09145 4db9190ca00b3eb43e3b3be70d00ca7f 964 SUPERFAMILY SSF48168 159 375 2.88E-61 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TVD_07650 dfa69cadf7fbf19615d4f732885b32da 466 SUPERFAMILY SSF56954 3 461 5.89E-58 T 11-10-2018 TVD_07650 dfa69cadf7fbf19615d4f732885b32da 466 Gene3D G3DSA:1.20.1600.10 3 455 8.7E-72 T 11-10-2018 TVD_07650 dfa69cadf7fbf19615d4f732885b32da 466 Pfam PF02321 Outer membrane efflux protein 259 449 4.2E-19 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_07650 dfa69cadf7fbf19615d4f732885b32da 466 Pfam PF02321 Outer membrane efflux protein 5 231 1.0E-13 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_13615 ea1ddb5d6f9dbb408e78144312b8ff03 328 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 5.3E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TVD_13615 ea1ddb5d6f9dbb408e78144312b8ff03 328 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 5.3E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TVD_13615 ea1ddb5d6f9dbb408e78144312b8ff03 328 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 5.3E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TVD_13615 ea1ddb5d6f9dbb408e78144312b8ff03 328 SUPERFAMILY SSF53474 2 295 2.18E-66 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_13615 ea1ddb5d6f9dbb408e78144312b8ff03 328 PIRSF PIRSF006431 1 315 3.0E-141 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 TVD_13615 ea1ddb5d6f9dbb408e78144312b8ff03 328 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 7.9E-14 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 TVD_13615 ea1ddb5d6f9dbb408e78144312b8ff03 328 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 7.9E-14 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 TVD_13615 ea1ddb5d6f9dbb408e78144312b8ff03 328 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 7.9E-14 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 TVD_13615 ea1ddb5d6f9dbb408e78144312b8ff03 328 Pfam PF00561 alpha/beta hydrolase fold 36 296 1.0E-32 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TVD_13615 ea1ddb5d6f9dbb408e78144312b8ff03 328 Gene3D G3DSA:3.40.50.1820 1 314 8.9E-110 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_13615 ea1ddb5d6f9dbb408e78144312b8ff03 328 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 310 1.6E-133 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 TVD_12470 e58cbc375a6ea4be5092f3b49a3b4bea 269 PIRSF PIRSF001356 3 267 1.6E-140 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 TVD_12470 e58cbc375a6ea4be5092f3b49a3b4bea 269 Pfam PF02675 S-adenosylmethionine decarboxylase 39 173 3.1E-30 T 11-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 TVD_12470 e58cbc375a6ea4be5092f3b49a3b4bea 269 SUPERFAMILY SSF56276 47 178 1.61E-23 T 11-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 TVD_12470 e58cbc375a6ea4be5092f3b49a3b4bea 269 Gene3D G3DSA:3.60.90.10 101 189 9.1E-7 T 11-10-2018 TVD_12470 e58cbc375a6ea4be5092f3b49a3b4bea 269 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 265 2.5E-143 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 TVD_12470 e58cbc375a6ea4be5092f3b49a3b4bea 269 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 269 162.553 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 TVD_01700 b541e82e609ee71cce2be6a6fb80aea2 294 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 20 285 6.1E-32 T 11-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 TVD_01700 b541e82e609ee71cce2be6a6fb80aea2 294 Gene3D G3DSA:2.30.42.10 194 294 2.5E-23 T 11-10-2018 TVD_01700 b541e82e609ee71cce2be6a6fb80aea2 294 Pfam PF13180 PDZ domain 225 292 1.4E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_01700 b541e82e609ee71cce2be6a6fb80aea2 294 SUPERFAMILY SSF50156 197 292 8.68E-18 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TVD_01700 b541e82e609ee71cce2be6a6fb80aea2 294 Pfam PF11356 Type II secretion system protein C 21 163 1.1E-28 T 11-10-2018 IPR024961 Type II secretion system protein C, N-terminal TVD_01700 b541e82e609ee71cce2be6a6fb80aea2 294 Gene3D G3DSA:2.30.30.830 94 164 3.2E-16 T 11-10-2018 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 Gene3D G3DSA:3.40.50.620 303 524 9.0E-79 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 SUPERFAMILY SSF52374 1 610 7.68E-135 T 11-10-2018 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 SUPERFAMILY SSF46589 858 922 4.71E-15 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 923 16.086 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 Gene3D G3DSA:3.40.50.620 2 197 1.5E-60 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 SUPERFAMILY SSF50677 189 340 8.5E-65 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 Gene3D G3DSA:1.10.730.10 549 791 2.2E-69 T 11-10-2018 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 600 6.4E-218 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 SUPERFAMILY SSF47323 611 873 3.74E-66 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 Gene3D G3DSA:1.10.287.380 851 922 9.5E-21 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 Gene3D G3DSA:3.90.740.10 238 302 1.1E-8 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 PRINTS PR00986 Valyl-tRNA synthetase signature 475 493 1.3E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 PRINTS PR00986 Valyl-tRNA synthetase signature 344 357 1.3E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 PRINTS PR00986 Valyl-tRNA synthetase signature 444 465 1.3E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 PRINTS PR00986 Valyl-tRNA synthetase signature 228 245 1.3E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 PRINTS PR00986 Valyl-tRNA synthetase signature 34 45 1.3E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 903 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 Gene3D G3DSA:3.90.740.10 198 237 3.5E-6 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 858 922 3.4E-17 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 TVD_11500 a86b0defd6c10533e13b6c05bd30c21a 925 Pfam PF08264 Anticodon-binding domain of tRNA 644 799 4.0E-39 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TVD_02165 467c013d7044bac0d0aa52693218a8e8 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 24.621 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_02165 467c013d7044bac0d0aa52693218a8e8 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_02165 467c013d7044bac0d0aa52693218a8e8 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 3.0E-129 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_02165 467c013d7044bac0d0aa52693218a8e8 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 3.2E-5 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_02165 467c013d7044bac0d0aa52693218a8e8 360 Pfam PF00953 Glycosyl transferase family 4 99 284 7.0E-37 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 TVD_02165 467c013d7044bac0d0aa52693218a8e8 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_11255 a8c721852684d61a79b17f3bb2a63933 96 PRINTS PR00160 Glutaredoxin signature 46 59 2.4E-11 T 11-10-2018 IPR014025 Glutaredoxin subgroup TVD_11255 a8c721852684d61a79b17f3bb2a63933 96 PRINTS PR00160 Glutaredoxin signature 60 73 2.4E-11 T 11-10-2018 IPR014025 Glutaredoxin subgroup TVD_11255 a8c721852684d61a79b17f3bb2a63933 96 PRINTS PR00160 Glutaredoxin signature 3 21 2.4E-11 T 11-10-2018 IPR014025 Glutaredoxin subgroup TVD_11255 a8c721852684d61a79b17f3bb2a63933 96 ProSitePatterns PS00195 Glutaredoxin active site. 5 21 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 TVD_11255 a8c721852684d61a79b17f3bb2a63933 96 SUPERFAMILY SSF52833 4 86 2.66E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_11255 a8c721852684d61a79b17f3bb2a63933 96 Pfam PF00462 Glutaredoxin 4 63 9.6E-17 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 TVD_11255 a8c721852684d61a79b17f3bb2a63933 96 Gene3D G3DSA:3.40.30.10 2 82 1.1E-21 T 11-10-2018 TVD_11255 a8c721852684d61a79b17f3bb2a63933 96 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 81 3.2E-27 T 11-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 TVD_04040 d95a0730b0841faeb2b0e105bc24bf8b 614 Gene3D G3DSA:1.10.8.60 8 237 6.3E-101 T 11-10-2018 TVD_04040 d95a0730b0841faeb2b0e105bc24bf8b 614 SMART SM00382 37 197 2.0E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_04040 d95a0730b0841faeb2b0e105bc24bf8b 614 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 9.7E-126 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 TVD_04040 d95a0730b0841faeb2b0e105bc24bf8b 614 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 492 593 4.9E-12 T 11-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_04040 d95a0730b0841faeb2b0e105bc24bf8b 614 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 9.0E-6 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TVD_04040 d95a0730b0841faeb2b0e105bc24bf8b 614 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 9.0E-6 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TVD_04040 d95a0730b0841faeb2b0e105bc24bf8b 614 SUPERFAMILY SSF52540 34 222 2.79E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04040 d95a0730b0841faeb2b0e105bc24bf8b 614 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.1E-43 T 11-10-2018 TVD_04040 d95a0730b0841faeb2b0e105bc24bf8b 614 Gene3D G3DSA:3.30.300.150 470 582 1.0E-9 T 11-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_04040 d95a0730b0841faeb2b0e105bc24bf8b 614 Gene3D G3DSA:1.20.272.10 242 361 9.2E-35 T 11-10-2018 TVD_04040 d95a0730b0841faeb2b0e105bc24bf8b 614 SUPERFAMILY SSF48019 243 364 2.38E-28 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 TVD_04040 d95a0730b0841faeb2b0e105bc24bf8b 614 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 364 7.7E-28 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 TVD_04040 d95a0730b0841faeb2b0e105bc24bf8b 614 Gene3D G3DSA:3.40.50.300 13 177 6.3E-101 T 11-10-2018 TVD_00715 0db407e47a0063ba3c20c7b0b8047d2b 410 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 51.989 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 TVD_00715 0db407e47a0063ba3c20c7b0b8047d2b 410 Gene3D G3DSA:1.10.3090.10 122 406 1.9E-40 T 11-10-2018 TVD_00715 0db407e47a0063ba3c20c7b0b8047d2b 410 SUPERFAMILY SSF81891 121 361 3.53E-51 T 11-10-2018 TVD_00715 0db407e47a0063ba3c20c7b0b8047d2b 410 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 211 3.8E-13 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TVD_00715 0db407e47a0063ba3c20c7b0b8047d2b 410 SMART SM00471 224 338 1.2E-5 T 11-10-2018 IPR003607 HD/PDEase domain TVD_00715 0db407e47a0063ba3c20c7b0b8047d2b 410 SUPERFAMILY SSF81301 1 119 6.98E-30 T 11-10-2018 TVD_00715 0db407e47a0063ba3c20c7b0b8047d2b 410 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 41.082 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 TVD_00715 0db407e47a0063ba3c20c7b0b8047d2b 410 Pfam PF01743 Poly A polymerase head domain 3 122 1.5E-17 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TVD_00715 0db407e47a0063ba3c20c7b0b8047d2b 410 Gene3D G3DSA:3.30.460.10 1 121 1.1E-28 T 11-10-2018 TVD_00715 0db407e47a0063ba3c20c7b0b8047d2b 410 Pfam PF01966 HD domain 231 311 1.8E-9 T 11-10-2018 IPR006674 HD domain TVD_00715 0db407e47a0063ba3c20c7b0b8047d2b 410 PIRSF PIRSF000813 1 407 2.8E-182 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 TVD_07550 5918c0c83c5734cb92389915bf81590e 117 Pfam PF01022 Bacterial regulatory protein, arsR family 14 55 6.7E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_07550 5918c0c83c5734cb92389915bf81590e 117 Gene3D G3DSA:1.10.10.10 4 99 4.4E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_07550 5918c0c83c5734cb92389915bf81590e 117 SMART SM00418 7 89 1.3E-22 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_07550 5918c0c83c5734cb92389915bf81590e 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 3.0E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_07550 5918c0c83c5734cb92389915bf81590e 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 3.0E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_07550 5918c0c83c5734cb92389915bf81590e 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 3.0E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_07550 5918c0c83c5734cb92389915bf81590e 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 3.0E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_07550 5918c0c83c5734cb92389915bf81590e 117 SUPERFAMILY SSF46785 3 87 2.37E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_13530 d21a3da58fd22a6519a47c3c65f60613 624 Pfam PF01134 Glucose inhibited division protein A 6 395 4.4E-160 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 TVD_13530 d21a3da58fd22a6519a47c3c65f60613 624 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 366 389 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 TVD_13530 d21a3da58fd22a6519a47c3c65f60613 624 Gene3D G3DSA:1.10.10.1800 457 548 3.0E-17 T 11-10-2018 TVD_13530 d21a3da58fd22a6519a47c3c65f60613 624 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 3 622 42.153 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 TVD_13530 d21a3da58fd22a6519a47c3c65f60613 624 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 271 285 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 TVD_13530 d21a3da58fd22a6519a47c3c65f60613 624 Pfam PF13932 GidA associated domain 399 613 7.2E-76 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 TVD_13530 d21a3da58fd22a6519a47c3c65f60613 624 Gene3D G3DSA:1.10.150.570 567 620 6.4E-22 T 11-10-2018 TVD_13530 d21a3da58fd22a6519a47c3c65f60613 624 SMART SM01228 544 615 3.8E-41 T 11-10-2018 TVD_13530 d21a3da58fd22a6519a47c3c65f60613 624 SUPERFAMILY SSF51905 4 258 1.6E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_13530 d21a3da58fd22a6519a47c3c65f60613 624 Gene3D G3DSA:3.50.50.60 1 231 6.9E-90 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_13530 d21a3da58fd22a6519a47c3c65f60613 624 Gene3D G3DSA:3.50.50.60 301 456 5.5E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_13530 d21a3da58fd22a6519a47c3c65f60613 624 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 5 620 1.6E-262 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 TVD_08375 ffe283d68668d88c0e1993f26d13e504 201 SUPERFAMILY SSF75169 65 180 5.83E-8 T 11-10-2018 IPR027396 DsrEFH-like TVD_08375 ffe283d68668d88c0e1993f26d13e504 201 Pfam PF02635 DsrE/DsrF-like family 92 179 3.1E-5 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_07680 d1dfaf1b80d055dc7532ac623912d2c2 761 Pfam PF03458 UPF0126 domain 311 382 8.4E-15 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 TVD_07680 d1dfaf1b80d055dc7532ac623912d2c2 761 Pfam PF03458 UPF0126 domain 421 495 1.1E-8 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 TVD_07680 d1dfaf1b80d055dc7532ac623912d2c2 761 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 69 291 3.6E-22 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TVD_07680 d1dfaf1b80d055dc7532ac623912d2c2 761 SMART SM00062 61 298 7.6E-7 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TVD_07680 d1dfaf1b80d055dc7532ac623912d2c2 761 Gene3D G3DSA:3.40.190.10 148 254 1.9E-23 T 11-10-2018 TVD_07680 d1dfaf1b80d055dc7532ac623912d2c2 761 SUPERFAMILY SSF53850 62 291 1.59E-29 T 11-10-2018 TVD_07680 d1dfaf1b80d055dc7532ac623912d2c2 761 Gene3D G3DSA:3.40.190.10 70 289 1.9E-23 T 11-10-2018 TVD_12030 393100ade3df8f020506d81c77865083 407 Pfam PF00764 Arginosuccinate synthase 9 399 9.8E-157 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TVD_12030 393100ade3df8f020506d81c77865083 407 SUPERFAMILY SSF69864 177 405 1.7E-94 T 11-10-2018 TVD_12030 393100ade3df8f020506d81c77865083 407 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TVD_12030 393100ade3df8f020506d81c77865083 407 Gene3D G3DSA:3.40.50.620 6 175 1.5E-71 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_12030 393100ade3df8f020506d81c77865083 407 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 400 8.5E-144 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TVD_12030 393100ade3df8f020506d81c77865083 407 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TVD_12030 393100ade3df8f020506d81c77865083 407 SUPERFAMILY SSF52402 6 210 5.73E-53 T 11-10-2018 TVD_12030 393100ade3df8f020506d81c77865083 407 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 404 53.792 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TVD_12030 393100ade3df8f020506d81c77865083 407 Gene3D G3DSA:3.90.1260.10 180 406 3.6E-100 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TVD_01755 49ea1a0e09821c57d2cd202a5e823c45 1487 Pfam PF01645 Conserved region in glutamate synthase 800 1164 3.1E-148 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 TVD_01755 49ea1a0e09821c57d2cd202a5e823c45 1487 Pfam PF00310 Glutamine amidotransferases class-II 20 432 1.2E-163 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TVD_01755 49ea1a0e09821c57d2cd202a5e823c45 1487 SUPERFAMILY SSF51395 451 1197 1.59E-255 T 11-10-2018 TVD_01755 49ea1a0e09821c57d2cd202a5e823c45 1487 Gene3D G3DSA:3.20.20.70 489 1178 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_01755 49ea1a0e09821c57d2cd202a5e823c45 1487 Gene3D G3DSA:3.20.20.70 437 799 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_01755 49ea1a0e09821c57d2cd202a5e823c45 1487 Pfam PF01493 GXGXG motif 1243 1430 6.4E-79 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 TVD_01755 49ea1a0e09821c57d2cd202a5e823c45 1487 SUPERFAMILY SSF69336 1220 1474 3.01E-88 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 TVD_01755 49ea1a0e09821c57d2cd202a5e823c45 1487 SUPERFAMILY SSF56235 20 434 6.25E-138 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_01755 49ea1a0e09821c57d2cd202a5e823c45 1487 Gene3D G3DSA:2.160.20.60 1202 1476 7.5E-103 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 TVD_01755 49ea1a0e09821c57d2cd202a5e823c45 1487 Gene3D G3DSA:3.60.20.10 20 551 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_01755 49ea1a0e09821c57d2cd202a5e823c45 1487 Pfam PF04898 Glutamate synthase central domain 464 744 6.9E-106 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 Pfam PF00990 Diguanylate cyclase, GGDEF domain 269 430 8.3E-47 T 11-10-2018 IPR000160 GGDEF domain TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 SMART SM00267 258 434 5.8E-61 T 11-10-2018 IPR000160 GGDEF domain TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 SMART SM00086 90 131 0.71 T 11-10-2018 IPR001610 PAC motif TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 SMART SM00086 216 258 9.6E-12 T 11-10-2018 IPR001610 PAC motif TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 Pfam PF08447 PAS fold 40 122 5.0E-13 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 Pfam PF08447 PAS fold 166 252 1.9E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 SMART SM00091 143 209 1.7E-8 T 11-10-2018 IPR000014 PAS domain TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 SMART SM00091 12 84 17.0 T 11-10-2018 IPR000014 PAS domain TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 SUPERFAMILY SSF55785 33 140 1.01E-16 T 11-10-2018 IPR035965 PAS domain superfamily TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 SUPERFAMILY SSF55073 274 435 6.8E-51 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 434 5.7E-42 T 11-10-2018 IPR000160 GGDEF domain TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 SUPERFAMILY SSF55785 128 256 5.76E-30 T 11-10-2018 IPR035965 PAS domain superfamily TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 Gene3D G3DSA:3.30.450.20 134 256 1.6E-30 T 11-10-2018 TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 44 138 2.1E-9 T 11-10-2018 IPR000014 PAS domain TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 263 2.8E-24 T 11-10-2018 IPR000014 PAS domain TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 Gene3D G3DSA:3.30.70.270 263 440 6.2E-58 T 11-10-2018 TVD_08500 cef7b9c3f85fc49282754ee7220c62be 449 Gene3D G3DSA:3.30.450.20 12 129 3.6E-18 T 11-10-2018 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 Gene3D G3DSA:3.30.70.1430 556 656 0.0 T 11-10-2018 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 11-10-2018 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 SUPERFAMILY SSF82693 40 134 7.67E-27 T 11-10-2018 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 SUPERFAMILY SSF82693 136 324 3.4E-22 T 11-10-2018 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 11-10-2018 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 SUPERFAMILY SSF82714 707 792 9.02E-21 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 Pfam PF00873 AcrB/AcrD/AcrF family 5 1011 3.3E-299 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 SUPERFAMILY SSF82866 291 489 3.92E-46 T 11-10-2018 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 Gene3D G3DSA:3.30.70.1430 40 802 0.0 T 11-10-2018 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 SUPERFAMILY SSF82866 790 1013 1.7E-50 T 11-10-2018 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.5E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 7.5E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 PRINTS PR00702 Acriflavin resistance protein family signature 612 626 7.5E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 7.5E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 7.5E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 7.5E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 7.5E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.5E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 7.5E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 Gene3D G3DSA:1.20.1640.10 502 1008 0.0 T 11-10-2018 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 Gene3D G3DSA:3.30.70.1440 657 851 0.0 T 11-10-2018 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 Gene3D G3DSA:3.30.2090.10 706 794 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 SUPERFAMILY SSF82693 554 655 3.66E-16 T 11-10-2018 TVD_01085 2a8297c09c558c6faa58a136c9818921 1046 SUPERFAMILY SSF82714 182 266 1.7E-19 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_12135 c5578d3792fed8bf0b5b48fc7049cc24 298 Gene3D G3DSA:3.90.1280.10 229 286 2.4E-24 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 TVD_12135 c5578d3792fed8bf0b5b48fc7049cc24 298 SUPERFAMILY SSF118352 228 284 2.35E-21 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 TVD_12135 c5578d3792fed8bf0b5b48fc7049cc24 298 PIRSF PIRSF005261 1 287 7.9E-79 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 TVD_12135 c5578d3792fed8bf0b5b48fc7049cc24 298 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 287 29.265 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 TVD_12135 c5578d3792fed8bf0b5b48fc7049cc24 298 Pfam PF01430 Hsp33 protein 5 276 7.9E-84 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 TVD_12135 c5578d3792fed8bf0b5b48fc7049cc24 298 Gene3D G3DSA:3.55.30.10 1 174 6.0E-59 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 TVD_12135 c5578d3792fed8bf0b5b48fc7049cc24 298 SUPERFAMILY SSF64397 5 235 1.09E-61 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 TVD_12135 c5578d3792fed8bf0b5b48fc7049cc24 298 Gene3D G3DSA:1.10.287.480 180 228 3.0E-12 T 11-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily TVD_09485 9b71892399b0fafbcea487a4572d5266 474 Gene3D G3DSA:3.30.70.150 16 142 5.0E-49 T 11-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 TVD_09485 9b71892399b0fafbcea487a4572d5266 474 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 190 198 - T 11-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 TVD_09485 9b71892399b0fafbcea487a4572d5266 474 Hamap MF_01338 Ribulose bisphosphate carboxylase large chain [rbcL]. 3 469 60.353 T 11-10-2018 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 TVD_09485 9b71892399b0fafbcea487a4572d5266 474 SUPERFAMILY SSF54966 4 142 7.33E-56 T 11-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 TVD_09485 9b71892399b0fafbcea487a4572d5266 474 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 148 456 1.3E-131 T 11-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 TVD_09485 9b71892399b0fafbcea487a4572d5266 474 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 18 138 1.3E-43 T 11-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 TVD_09485 9b71892399b0fafbcea487a4572d5266 474 SUPERFAMILY SSF51649 144 470 3.27E-145 T 11-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 TVD_09485 9b71892399b0fafbcea487a4572d5266 474 Gene3D G3DSA:3.20.20.110 144 474 1.3E-157 T 11-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 TVD_03925 507baffb1cd6ca12843910f6beedafdc 215 SUPERFAMILY SSF109604 3 164 2.42E-22 T 11-10-2018 TVD_03925 507baffb1cd6ca12843910f6beedafdc 215 Gene3D G3DSA:1.10.3210.10 1 164 7.6E-22 T 11-10-2018 TVD_03925 507baffb1cd6ca12843910f6beedafdc 215 Pfam PF13328 HD domain 7 108 2.3E-11 T 11-10-2018 IPR003607 HD/PDEase domain TVD_13210 7bddf024a5e2929d7069de2d421c0e6f 421 Pfam PF00365 Phosphofructokinase 9 322 7.1E-48 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TVD_13210 7bddf024a5e2929d7069de2d421c0e6f 421 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 136 153 5.1E-15 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TVD_13210 7bddf024a5e2929d7069de2d421c0e6f 421 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 5.1E-15 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TVD_13210 7bddf024a5e2929d7069de2d421c0e6f 421 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 236 248 5.1E-15 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TVD_13210 7bddf024a5e2929d7069de2d421c0e6f 421 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 103 119 5.1E-15 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TVD_13210 7bddf024a5e2929d7069de2d421c0e6f 421 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 194 5.1E-15 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TVD_13210 7bddf024a5e2929d7069de2d421c0e6f 421 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 2 398 42.754 T 11-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 TVD_13210 7bddf024a5e2929d7069de2d421c0e6f 421 Gene3D G3DSA:3.40.50.450 4 399 1.0E-142 T 11-10-2018 TVD_13210 7bddf024a5e2929d7069de2d421c0e6f 421 PIRSF PIRSF036483 1 417 7.1E-164 T 11-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 TVD_13210 7bddf024a5e2929d7069de2d421c0e6f 421 Gene3D G3DSA:3.40.50.460 141 386 1.0E-142 T 11-10-2018 TVD_13210 7bddf024a5e2929d7069de2d421c0e6f 421 SUPERFAMILY SSF53784 4 408 1.96E-104 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 TVD_06980 e7403cb796801e5fb30c7bbb4c1f0fcc 248 SUPERFAMILY SSF53335 19 231 2.94E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_06980 e7403cb796801e5fb30c7bbb4c1f0fcc 248 Gene3D G3DSA:3.40.50.150 33 245 3.4E-40 T 11-10-2018 TVD_06980 e7403cb796801e5fb30c7bbb4c1f0fcc 248 Pfam PF01209 ubiE/COQ5 methyltransferase family 22 243 1.7E-31 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 TVD_03880 f36144e4d997d9b2f7903bbc51fcef12 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 7 86 1.4E-25 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 TVD_03880 f36144e4d997d9b2f7903bbc51fcef12 87 Gene3D G3DSA:3.30.2310.20 2 86 6.8E-12 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_03880 f36144e4d997d9b2f7903bbc51fcef12 87 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 85 2.5E-8 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TVD_03880 f36144e4d997d9b2f7903bbc51fcef12 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 26 86 5.3E-9 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 TVD_03880 f36144e4d997d9b2f7903bbc51fcef12 87 SUPERFAMILY SSF143011 2 87 4.32E-19 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_04900 2454cdd16a82482787484ade140cec22 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 92 1.2E-14 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TVD_04900 2454cdd16a82482787484ade140cec22 112 PRINTS PR00355 Adrenodoxin signature 42 52 7.8E-11 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 TVD_04900 2454cdd16a82482787484ade140cec22 112 PRINTS PR00355 Adrenodoxin signature 83 91 7.8E-11 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 TVD_04900 2454cdd16a82482787484ade140cec22 112 PRINTS PR00355 Adrenodoxin signature 60 74 7.8E-11 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 TVD_04900 2454cdd16a82482787484ade140cec22 112 SUPERFAMILY SSF54292 5 105 5.14E-33 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TVD_04900 2454cdd16a82482787484ade140cec22 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 TVD_04900 2454cdd16a82482787484ade140cec22 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 1.8E-56 T 11-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 TVD_04900 2454cdd16a82482787484ade140cec22 112 Gene3D G3DSA:3.10.20.30 1 112 2.4E-37 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TVD_13365 d5a68c6a201a54589520a01468a77f2a 349 Pfam PF01476 LysM domain 118 164 3.7E-7 T 11-10-2018 IPR018392 LysM domain TVD_13365 d5a68c6a201a54589520a01468a77f2a 349 SUPERFAMILY SSF48452 245 342 3.8E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_13365 d5a68c6a201a54589520a01468a77f2a 349 SMART SM00257 117 164 7.3E-5 T 11-10-2018 IPR018392 LysM domain TVD_13365 d5a68c6a201a54589520a01468a77f2a 349 SUPERFAMILY SSF54106 116 164 3.79E-6 T 11-10-2018 TVD_13365 d5a68c6a201a54589520a01468a77f2a 349 Gene3D G3DSA:3.10.350.10 106 170 2.5E-9 T 11-10-2018 IPR036779 LysM domain superfamily TVD_13365 d5a68c6a201a54589520a01468a77f2a 349 SMART SM00028 291 324 35.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_13365 d5a68c6a201a54589520a01468a77f2a 349 SMART SM00028 243 276 0.38 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_13365 d5a68c6a201a54589520a01468a77f2a 349 Gene3D G3DSA:1.25.40.10 176 345 8.7E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_13430 dd1e6226a33ac857ea193f21447af1e1 240 Pfam PF00072 Response regulator receiver domain 9 116 1.4E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_13430 dd1e6226a33ac857ea193f21447af1e1 240 SMART SM00448 6 116 2.8E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_13430 dd1e6226a33ac857ea193f21447af1e1 240 Gene3D G3DSA:3.40.50.2300 4 138 3.9E-31 T 11-10-2018 TVD_13430 dd1e6226a33ac857ea193f21447af1e1 240 SUPERFAMILY SSF52172 6 135 4.27E-32 T 11-10-2018 IPR011006 CheY-like superfamily TVD_13430 dd1e6226a33ac857ea193f21447af1e1 240 Pfam PF04397 LytTr DNA-binding domain 144 236 1.5E-11 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 TVD_13430 dd1e6226a33ac857ea193f21447af1e1 240 SMART SM00850 140 237 4.9E-10 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 TVD_08445 9ec4db1f4fd2c07b8953825805f28319 238 SUPERFAMILY SSF52540 12 231 1.82E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_08445 9ec4db1f4fd2c07b8953825805f28319 238 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_08445 9ec4db1f4fd2c07b8953825805f28319 238 Pfam PF00005 ABC transporter 28 177 7.6E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_08445 9ec4db1f4fd2c07b8953825805f28319 238 Gene3D G3DSA:3.40.50.300 9 235 1.4E-67 T 11-10-2018 TVD_08445 9ec4db1f4fd2c07b8953825805f28319 238 SMART SM00382 37 226 1.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_11450 59c69f3c24ada4705d18e0f537f29410 625 SUPERFAMILY SSF55874 3 214 3.01E-53 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_11450 59c69f3c24ada4705d18e0f537f29410 625 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 210 326 7.7E-38 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 TVD_11450 59c69f3c24ada4705d18e0f537f29410 625 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 307 6.5E-95 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 TVD_11450 59c69f3c24ada4705d18e0f537f29410 625 SUPERFAMILY SSF118116 434 623 1.83E-58 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily TVD_11450 59c69f3c24ada4705d18e0f537f29410 625 Pfam PF08676 MutL C terminal dimerisation domain 434 581 5.9E-48 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 TVD_11450 59c69f3c24ada4705d18e0f537f29410 625 SMART SM01340 209 327 1.1E-55 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 TVD_11450 59c69f3c24ada4705d18e0f537f29410 625 Gene3D G3DSA:2.30.42.20 440 618 7.7E-58 T 11-10-2018 TVD_11450 59c69f3c24ada4705d18e0f537f29410 625 Gene3D G3DSA:3.30.1370.100 481 576 7.7E-58 T 11-10-2018 TVD_11450 59c69f3c24ada4705d18e0f537f29410 625 Gene3D G3DSA:3.30.230.10 214 326 4.2E-36 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TVD_11450 59c69f3c24ada4705d18e0f537f29410 625 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 78 8.3E-7 T 11-10-2018 TVD_11450 59c69f3c24ada4705d18e0f537f29410 625 SUPERFAMILY SSF54211 191 327 3.38E-37 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_11450 59c69f3c24ada4705d18e0f537f29410 625 Gene3D G3DSA:3.30.565.10 1 212 1.1E-67 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_11450 59c69f3c24ada4705d18e0f537f29410 625 SMART SM00853 438 581 3.8E-52 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 TVD_11450 59c69f3c24ada4705d18e0f537f29410 625 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 621 27.97 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 TVD_11450 59c69f3c24ada4705d18e0f537f29410 625 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site TVD_12700 5919318067ee785a2d528fd9e88c4523 392 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 200 214 - T 11-10-2018 IPR001482 Type II/IV secretion system protein TVD_12700 5919318067ee785a2d528fd9e88c4523 392 Pfam PF00437 Type II/IV secretion system protein 40 277 1.5E-38 T 11-10-2018 IPR001482 Type II/IV secretion system protein TVD_12700 5919318067ee785a2d528fd9e88c4523 392 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 10 350 3.8E-140 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 TVD_12700 5919318067ee785a2d528fd9e88c4523 392 SUPERFAMILY SSF52540 4 344 3.8E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_12700 5919318067ee785a2d528fd9e88c4523 392 Gene3D G3DSA:3.30.450.90 2 107 1.7E-32 T 11-10-2018 TVD_12700 5919318067ee785a2d528fd9e88c4523 392 Gene3D G3DSA:3.40.50.300 108 365 1.2E-88 T 11-10-2018 TVD_04890 504667f9295c84818476ab037e9a023a 174 SUPERFAMILY SSF47144 81 171 1.24E-13 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 TVD_04890 504667f9295c84818476ab037e9a023a 174 SUPERFAMILY SSF46565 3 73 3.66E-15 T 11-10-2018 IPR036869 Chaperone J-domain superfamily TVD_04890 504667f9295c84818476ab037e9a023a 174 Gene3D G3DSA:1.10.287.110 1 74 3.9E-18 T 11-10-2018 IPR036869 Chaperone J-domain superfamily TVD_04890 504667f9295c84818476ab037e9a023a 174 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 14 169 8.2E-23 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 TVD_04890 504667f9295c84818476ab037e9a023a 174 SMART SM00271 2 67 0.0022 T 11-10-2018 IPR001623 DnaJ domain TVD_04890 504667f9295c84818476ab037e9a023a 174 Gene3D G3DSA:1.20.1280.20 82 172 7.0E-16 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 TVD_04890 504667f9295c84818476ab037e9a023a 174 Pfam PF07743 HSCB C-terminal oligomerisation domain 90 165 3.7E-11 T 11-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 TVD_04890 504667f9295c84818476ab037e9a023a 174 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 2 172 18.865 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 TVD_04555 5dd4ac73c1b47b5ad299053815e8f34c 375 Gene3D G3DSA:1.10.287.470 111 170 2.6E-51 T 11-10-2018 TVD_04555 5dd4ac73c1b47b5ad299053815e8f34c 375 SUPERFAMILY SSF111369 68 280 2.22E-31 T 11-10-2018 TVD_04555 5dd4ac73c1b47b5ad299053815e8f34c 375 Gene3D G3DSA:2.40.420.20 286 353 2.6E-51 T 11-10-2018 TVD_04555 5dd4ac73c1b47b5ad299053815e8f34c 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 273 1.4E-20 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TVD_04555 5dd4ac73c1b47b5ad299053815e8f34c 375 Gene3D G3DSA:2.40.50.100 76 204 2.6E-51 T 11-10-2018 TVD_04555 5dd4ac73c1b47b5ad299053815e8f34c 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 52 355 9.8E-49 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TVD_04555 5dd4ac73c1b47b5ad299053815e8f34c 375 Gene3D G3DSA:2.40.30.170 67 285 2.6E-51 T 11-10-2018 TVD_05410 1d853497de0e7e22f201d71d2cae07ea 240 Gene3D G3DSA:1.10.3810.10 52 233 1.5E-50 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_05410 1d853497de0e7e22f201d71d2cae07ea 240 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 16 230 1.2E-69 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_05410 1d853497de0e7e22f201d71d2cae07ea 240 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 12 232 37.337 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_05410 1d853497de0e7e22f201d71d2cae07ea 240 SUPERFAMILY SSF53955 60 231 1.18E-57 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TVD_05410 1d853497de0e7e22f201d71d2cae07ea 240 Pfam PF00912 Transglycosylase 60 226 5.3E-49 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_12545 41f6d7c7aa108de6c96d46252c1b7814 169 SUPERFAMILY SSF52255 9 163 3.53E-66 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 TVD_12545 41f6d7c7aa108de6c96d46252c1b7814 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.389 T 11-10-2018 IPR033747 Class I PurE TVD_12545 41f6d7c7aa108de6c96d46252c1b7814 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 160 1.7E-65 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TVD_12545 41f6d7c7aa108de6c96d46252c1b7814 169 PIRSF PIRSF001338 5 164 8.7E-66 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 TVD_12545 41f6d7c7aa108de6c96d46252c1b7814 169 Pfam PF00731 AIR carboxylase 9 157 6.9E-65 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TVD_12545 41f6d7c7aa108de6c96d46252c1b7814 169 Gene3D G3DSA:3.40.50.7700 1 167 2.2E-74 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 TVD_12545 41f6d7c7aa108de6c96d46252c1b7814 169 SMART SM01001 8 159 6.6E-105 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 TVD_03555 a4db12f5c3636664fcb5f16996711a19 659 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 TVD_03555 a4db12f5c3636664fcb5f16996711a19 659 SMART SM00382 190 329 1.9E-25 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_03555 a4db12f5c3636664fcb5f16996711a19 659 Gene3D G3DSA:1.10.8.60 329 402 4.9E-29 T 11-10-2018 TVD_03555 a4db12f5c3636664fcb5f16996711a19 659 SUPERFAMILY SSF52540 150 397 1.59E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_03555 a4db12f5c3636664fcb5f16996711a19 659 Gene3D G3DSA:2.40.50.920 30 102 8.4E-10 T 11-10-2018 TVD_03555 a4db12f5c3636664fcb5f16996711a19 659 SUPERFAMILY SSF140990 408 608 1.31E-77 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TVD_03555 a4db12f5c3636664fcb5f16996711a19 659 Pfam PF01434 Peptidase family M41 388 598 8.2E-85 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 TVD_03555 a4db12f5c3636664fcb5f16996711a19 659 Pfam PF06480 FtsH Extracellular 8 95 1.0E-13 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 TVD_03555 a4db12f5c3636664fcb5f16996711a19 659 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 194 326 1.7E-45 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_03555 a4db12f5c3636664fcb5f16996711a19 659 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 612 37.662 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TVD_03555 a4db12f5c3636664fcb5f16996711a19 659 Gene3D G3DSA:1.20.58.760 403 606 5.6E-78 T 11-10-2018 TVD_03555 a4db12f5c3636664fcb5f16996711a19 659 Gene3D G3DSA:3.40.50.300 142 328 1.4E-70 T 11-10-2018 TVD_03555 a4db12f5c3636664fcb5f16996711a19 659 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 103 599 2.0E-243 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 TVD_12665 2ddb7f28acdc543e46c2ad659a9a261d 192 Pfam PF02622 Uncharacterized ACR, COG1678 22 179 3.2E-50 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 TVD_12665 2ddb7f28acdc543e46c2ad659a9a261d 192 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 11 192 37.025 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 TVD_12665 2ddb7f28acdc543e46c2ad659a9a261d 192 SUPERFAMILY SSF143456 13 192 3.01E-64 T 11-10-2018 TVD_12665 2ddb7f28acdc543e46c2ad659a9a261d 192 Gene3D G3DSA:3.40.1740.10 10 192 3.6E-69 T 11-10-2018 TVD_11350 9c718d4913d74007db14b78b0331272e 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 257 1.9E-94 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 TVD_11350 9c718d4913d74007db14b78b0331272e 264 Gene3D G3DSA:3.20.20.60 1 263 6.6E-92 T 11-10-2018 TVD_11350 9c718d4913d74007db14b78b0331272e 264 PIRSF PIRSF000388 1 264 3.5E-85 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 TVD_11350 9c718d4913d74007db14b78b0331272e 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 37.519 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 TVD_11350 9c718d4913d74007db14b78b0331272e 264 SUPERFAMILY SSF51621 4 258 1.37E-88 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TVD_11350 9c718d4913d74007db14b78b0331272e 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 259 2.7E-86 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 TVD_07285 e5bcaadfc74dbe4c8e435589233ac8d4 258 SUPERFAMILY SSF52313 6 229 4.97E-91 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily TVD_07285 e5bcaadfc74dbe4c8e435589233ac8d4 258 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 TVD_07285 e5bcaadfc74dbe4c8e435589233ac8d4 258 Gene3D G3DSA:1.10.287.610 103 150 2.6E-87 T 11-10-2018 TVD_07285 e5bcaadfc74dbe4c8e435589233ac8d4 258 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 227 40.973 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_07285 e5bcaadfc74dbe4c8e435589233ac8d4 258 Gene3D G3DSA:3.40.50.10490 8 219 2.6E-87 T 11-10-2018 TVD_07285 e5bcaadfc74dbe4c8e435589233ac8d4 258 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 TVD_07285 e5bcaadfc74dbe4c8e435589233ac8d4 258 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 1.1E-101 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_07285 e5bcaadfc74dbe4c8e435589233ac8d4 258 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.4E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_07285 e5bcaadfc74dbe4c8e435589233ac8d4 258 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.4E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_07285 e5bcaadfc74dbe4c8e435589233ac8d4 258 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.4E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_07285 e5bcaadfc74dbe4c8e435589233ac8d4 258 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.4E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_07285 e5bcaadfc74dbe4c8e435589233ac8d4 258 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.4E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_07285 e5bcaadfc74dbe4c8e435589233ac8d4 258 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.4E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_07285 e5bcaadfc74dbe4c8e435589233ac8d4 258 Pfam PF00318 Ribosomal protein S2 9 224 1.1E-92 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_00095 c7a472cfc7167d8b24a261439de1a53f 108 PRINTS PR00421 Thioredoxin family signature 32 41 7.7E-10 T 11-10-2018 TVD_00095 c7a472cfc7167d8b24a261439de1a53f 108 PRINTS PR00421 Thioredoxin family signature 24 32 7.7E-10 T 11-10-2018 TVD_00095 c7a472cfc7167d8b24a261439de1a53f 108 PRINTS PR00421 Thioredoxin family signature 72 83 7.7E-10 T 11-10-2018 TVD_00095 c7a472cfc7167d8b24a261439de1a53f 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 4.1E-40 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TVD_00095 c7a472cfc7167d8b24a261439de1a53f 108 Gene3D G3DSA:3.40.30.10 5 108 2.6E-35 T 11-10-2018 TVD_00095 c7a472cfc7167d8b24a261439de1a53f 108 Pfam PF00085 Thioredoxin 6 107 2.9E-35 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 TVD_00095 c7a472cfc7167d8b24a261439de1a53f 108 SUPERFAMILY SSF52833 3 108 1.52E-40 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_00095 c7a472cfc7167d8b24a261439de1a53f 108 PIRSF PIRSF000077 2 108 5.1E-45 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TVD_00095 c7a472cfc7167d8b24a261439de1a53f 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TVD_11030 8984e88491d60daef2327ce64fdbb140 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 19.46 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 TVD_11030 8984e88491d60daef2327ce64fdbb140 87 Gene3D G3DSA:3.30.70.260 1 87 2.1E-27 T 11-10-2018 TVD_11030 8984e88491d60daef2327ce64fdbb140 87 SUPERFAMILY SSF117991 4 87 3.27E-23 T 11-10-2018 IPR027471 YbeD-like domain superfamily TVD_11030 8984e88491d60daef2327ce64fdbb140 87 Pfam PF04359 Protein of unknown function (DUF493) 5 87 7.3E-27 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 TVD_08095 42d1bb32262509c73136332bb4a1e895 427 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 23 43 0.0013 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TVD_08095 42d1bb32262509c73136332bb4a1e895 427 Gene3D G3DSA:3.40.190.10 196 416 3.7E-37 T 11-10-2018 TVD_08095 42d1bb32262509c73136332bb4a1e895 427 Gene3D G3DSA:3.40.190.10 67 154 5.9E-11 T 11-10-2018 TVD_08095 42d1bb32262509c73136332bb4a1e895 427 SUPERFAMILY SSF53850 67 301 1.58E-34 T 11-10-2018 TVD_08095 42d1bb32262509c73136332bb4a1e895 427 Pfam PF13379 NMT1-like family 69 302 5.8E-41 T 11-10-2018 TVD_02450 b726f091f9fae445360727037b3fc3c7 59 SUPERFAMILY SSF55129 1 59 3.01E-17 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily TVD_02450 b726f091f9fae445360727037b3fc3c7 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 4.2E-17 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02450 b726f091f9fae445360727037b3fc3c7 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 17.475 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02450 b726f091f9fae445360727037b3fc3c7 59 Gene3D G3DSA:3.30.1390.20 1 59 2.2E-21 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily TVD_02450 b726f091f9fae445360727037b3fc3c7 59 PIRSF PIRSF002211 1 59 3.6E-23 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02450 b726f091f9fae445360727037b3fc3c7 59 Pfam PF00327 Ribosomal protein L30p/L7e 4 53 7.9E-14 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain TVD_05640 106bf8e90543a14c3b9352460967b875 315 SUPERFAMILY SSF82866 75 294 9.81E-42 T 11-10-2018 TVD_05640 106bf8e90543a14c3b9352460967b875 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 40 287 5.1E-85 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 TVD_05640 106bf8e90543a14c3b9352460967b875 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 12 298 29.809 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 TVD_05640 106bf8e90543a14c3b9352460967b875 315 Gene3D G3DSA:1.20.1640.10 120 300 1.1E-12 T 11-10-2018 TVD_05640 106bf8e90543a14c3b9352460967b875 315 PRINTS PR01755 Bacterial translocase SecF protein signature 39 54 7.0E-34 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TVD_05640 106bf8e90543a14c3b9352460967b875 315 PRINTS PR01755 Bacterial translocase SecF protein signature 203 221 7.0E-34 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TVD_05640 106bf8e90543a14c3b9352460967b875 315 PRINTS PR01755 Bacterial translocase SecF protein signature 155 169 7.0E-34 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TVD_05640 106bf8e90543a14c3b9352460967b875 315 PRINTS PR01755 Bacterial translocase SecF protein signature 235 250 7.0E-34 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TVD_05640 106bf8e90543a14c3b9352460967b875 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 125 284 2.8E-56 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TVD_05640 106bf8e90543a14c3b9352460967b875 315 Pfam PF02355 Protein export membrane protein 120 295 5.7E-69 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial TVD_05640 106bf8e90543a14c3b9352460967b875 315 Pfam PF07549 SecD/SecF GG Motif 35 57 1.4E-9 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site TVD_07675 890c70bd359d88ef093c1703938f28be 317 Pfam PF09084 NMT1/THI5 like 28 236 2.2E-41 T 11-10-2018 IPR015168 SsuA/THI5-like TVD_07675 890c70bd359d88ef093c1703938f28be 317 SUPERFAMILY SSF53850 24 264 1.46E-34 T 11-10-2018 TVD_07675 890c70bd359d88ef093c1703938f28be 317 Gene3D G3DSA:3.40.190.10 20 274 1.2E-59 T 11-10-2018 TVD_07675 890c70bd359d88ef093c1703938f28be 317 Gene3D G3DSA:3.40.190.10 99 197 1.2E-59 T 11-10-2018 TVD_03240 49c5b7527e233f3936f5ccbc09a9fe8e 421 Gene3D G3DSA:3.30.870.10 50 245 1.1E-43 T 11-10-2018 TVD_03240 49c5b7527e233f3936f5ccbc09a9fe8e 421 Pfam PF13091 PLD-like domain 78 217 8.2E-12 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TVD_03240 49c5b7527e233f3936f5ccbc09a9fe8e 421 Pfam PF13091 PLD-like domain 263 388 1.3E-28 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TVD_03240 49c5b7527e233f3936f5ccbc09a9fe8e 421 Gene3D G3DSA:3.30.870.10 246 390 2.2E-27 T 11-10-2018 TVD_03240 49c5b7527e233f3936f5ccbc09a9fe8e 421 SMART SM00155 157 184 3.9 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TVD_03240 49c5b7527e233f3936f5ccbc09a9fe8e 421 SMART SM00155 334 361 1.2E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TVD_03240 49c5b7527e233f3936f5ccbc09a9fe8e 421 SUPERFAMILY SSF56024 255 406 7.63E-35 T 11-10-2018 TVD_03240 49c5b7527e233f3936f5ccbc09a9fe8e 421 SUPERFAMILY SSF56024 41 236 4.19E-44 T 11-10-2018 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 397 622 7.5E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 594 620 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 425 438 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 Pfam PF00140 Sigma-70 factor, region 1.2 98 129 8.3E-13 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 634 44.538 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 Gene3D G3DSA:1.10.601.10 113 470 4.4E-122 T 11-10-2018 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 Gene3D G3DSA:1.10.220.120 2 65 3.7E-29 T 11-10-2018 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 Pfam PF04542 Sigma-70 region 2 401 470 1.8E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 SUPERFAMILY SSF88659 531 632 1.9E-27 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 397 633 1.2E-121 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 SUPERFAMILY SSF88946 115 468 6.59E-100 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 Pfam PF04545 Sigma-70, region 4 570 622 2.2E-19 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 Gene3D G3DSA:1.10.10.10 474 550 1.4E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 PRINTS PR00046 Major sigma-70 factor signature 573 585 3.6E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 PRINTS PR00046 Major sigma-70 factor signature 425 438 3.6E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 PRINTS PR00046 Major sigma-70 factor signature 609 620 3.6E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 PRINTS PR00046 Major sigma-70 factor signature 594 609 3.6E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 PRINTS PR00046 Major sigma-70 factor signature 449 457 3.6E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 SUPERFAMILY SSF88659 474 548 6.32E-21 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 Gene3D G3DSA:1.10.10.10 551 635 7.3E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 Pfam PF03979 Sigma-70 factor, region 1.1 4 81 2.3E-29 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 Pfam PF04539 Sigma-70 region 3 480 556 1.6E-30 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TVD_01745 1c7c07d616e8e70f4702683df829ef98 636 Pfam PF04546 Sigma-70, non-essential region 140 370 3.3E-57 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TVD_07530 11ab7191aa22efd31cac911fe692deeb 166 Pfam PF03928 Haem-degrading 36 158 2.8E-26 T 11-10-2018 IPR005624 Haem-degrading TVD_07530 11ab7191aa22efd31cac911fe692deeb 166 SUPERFAMILY SSF143744 27 161 3.14E-34 T 11-10-2018 IPR038084 GlcG-like domain superfamily TVD_07530 11ab7191aa22efd31cac911fe692deeb 166 Gene3D G3DSA:3.30.450.150 20 163 4.1E-41 T 11-10-2018 IPR038084 GlcG-like domain superfamily TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 Gene3D G3DSA:1.10.420.10 576 697 1.4E-143 T 11-10-2018 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 SUPERFAMILY SSF48113 17 429 1.43E-143 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 ProSitePatterns PS00436 Peroxidases active site signature. 88 99 - T 11-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 Pfam PF00141 Peroxidase 404 696 1.5E-34 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 Pfam PF00141 Peroxidase 74 395 1.1E-47 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 PRINTS PR00458 Haem peroxidase superfamily signature 88 102 4.8E-17 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 PRINTS PR00458 Haem peroxidase superfamily signature 166 178 4.8E-17 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 PRINTS PR00458 Haem peroxidase superfamily signature 257 272 4.8E-17 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 PRINTS PR00458 Haem peroxidase superfamily signature 316 331 4.8E-17 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 PRINTS PR00458 Haem peroxidase superfamily signature 148 165 4.8E-17 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 SUPERFAMILY SSF48113 430 721 1.46E-111 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 Gene3D G3DSA:1.10.420.20 189 397 1.4E-213 T 11-10-2018 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 476 502 1.8E-51 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 50 63 1.8E-51 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 24 46 1.8E-51 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 65 90 1.8E-51 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 265 288 1.8E-51 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 8 722 0.0 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 Gene3D G3DSA:1.10.520.10 431 721 1.4E-143 T 11-10-2018 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 Hamap MF_01961 Catalase-peroxidase [katG]. 5 722 39.24 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 TVD_02820 289a7fc6a862c60bc79f60e593a4fa62 726 Gene3D G3DSA:1.10.520.10 19 430 1.4E-213 T 11-10-2018 TVD_02715 763dc0a6768847e282dd8a3c3ffb31ee 217 Pfam PF12973 ChrR Cupin-like domain 21 110 6.9E-38 T 11-10-2018 IPR025979 ChrR-like cupin domain TVD_02715 763dc0a6768847e282dd8a3c3ffb31ee 217 Pfam PF12973 ChrR Cupin-like domain 134 214 1.6E-31 T 11-10-2018 IPR025979 ChrR-like cupin domain TVD_02715 763dc0a6768847e282dd8a3c3ffb31ee 217 Gene3D G3DSA:2.60.120.10 3 161 7.1E-57 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TVD_02715 763dc0a6768847e282dd8a3c3ffb31ee 217 SUPERFAMILY SSF51182 120 217 1.23E-24 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TVD_02715 763dc0a6768847e282dd8a3c3ffb31ee 217 SUPERFAMILY SSF51182 5 130 1.47E-34 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TVD_11830 4aec801ecb9c2a1779d08b30eb556605 101 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 12 72 14.484 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TVD_11830 4aec801ecb9c2a1779d08b30eb556605 101 Pfam PF02609 Exonuclease VII small subunit 13 63 2.3E-17 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TVD_11830 4aec801ecb9c2a1779d08b30eb556605 101 SUPERFAMILY SSF116842 9 70 9.68E-17 T 11-10-2018 TVD_11830 4aec801ecb9c2a1779d08b30eb556605 101 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 13 67 4.4E-18 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TVD_11830 4aec801ecb9c2a1779d08b30eb556605 101 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 24 52 0.002 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TVD_11830 4aec801ecb9c2a1779d08b30eb556605 101 Gene3D G3DSA:1.10.287.1040 6 80 1.1E-21 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 TVD_02390 463a2c98ce0c4031d1fa280420321e5f 226 SMART SM00322 60 128 3.8E-6 T 11-10-2018 IPR004087 K Homology domain GO:0003676 TVD_02390 463a2c98ce0c4031d1fa280420321e5f 226 ProSitePatterns PS00548 Ribosomal protein S3 signature. 166 200 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02390 463a2c98ce0c4031d1fa280420321e5f 226 SUPERFAMILY SSF54814 2 109 1.2E-34 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TVD_02390 463a2c98ce0c4031d1fa280420321e5f 226 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 211 2.8E-95 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 TVD_02390 463a2c98ce0c4031d1fa280420321e5f 226 Pfam PF07650 KH domain 38 113 2.7E-21 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02390 463a2c98ce0c4031d1fa280420321e5f 226 SUPERFAMILY SSF54821 111 209 3.53E-40 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02390 463a2c98ce0c4031d1fa280420321e5f 226 Pfam PF00189 Ribosomal protein S3, C-terminal domain 123 205 3.4E-41 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02390 463a2c98ce0c4031d1fa280420321e5f 226 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 209 38.947 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 TVD_02390 463a2c98ce0c4031d1fa280420321e5f 226 Gene3D G3DSA:3.30.300.20 17 110 1.2E-27 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TVD_02390 463a2c98ce0c4031d1fa280420321e5f 226 Gene3D G3DSA:3.30.1140.32 111 211 3.1E-44 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_11600 e9ebec7a89b074f044b67659db982f72 466 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 43 444 3.3E-61 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TVD_11600 e9ebec7a89b074f044b67659db982f72 466 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 421 434 8.7E-25 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TVD_11600 e9ebec7a89b074f044b67659db982f72 466 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 356 370 8.7E-25 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TVD_11600 e9ebec7a89b074f044b67659db982f72 466 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 341 355 8.7E-25 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TVD_11600 e9ebec7a89b074f044b67659db982f72 466 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 283 305 8.7E-25 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TVD_11600 e9ebec7a89b074f044b67659db982f72 466 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 55 74 8.7E-25 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TVD_11600 e9ebec7a89b074f044b67659db982f72 466 SUPERFAMILY SSF56601 13 465 1.61E-91 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TVD_11600 e9ebec7a89b074f044b67659db982f72 466 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 19 465 3.7E-87 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TVD_11600 e9ebec7a89b074f044b67659db982f72 466 Gene3D G3DSA:3.40.710.10 20 83 1.7E-6 T 11-10-2018 TVD_11600 e9ebec7a89b074f044b67659db982f72 466 Gene3D G3DSA:3.40.710.10 277 462 2.1E-52 T 11-10-2018 TVD_11600 e9ebec7a89b074f044b67659db982f72 466 Gene3D G3DSA:3.50.80.20 84 166 1.0E-16 T 11-10-2018 TVD_10420 efc0b8072f6ddd890e31f86e8f0a8921 298 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 1 296 51.276 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 TVD_10420 efc0b8072f6ddd890e31f86e8f0a8921 298 Pfam PF05175 Methyltransferase small domain 129 211 1.9E-16 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 TVD_10420 efc0b8072f6ddd890e31f86e8f0a8921 298 Gene3D G3DSA:1.10.8.10 9 99 3.5E-7 T 11-10-2018 TVD_10420 efc0b8072f6ddd890e31f86e8f0a8921 298 PIRSF PIRSF037167 1 298 4.6E-129 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 TVD_10420 efc0b8072f6ddd890e31f86e8f0a8921 298 Gene3D G3DSA:3.40.50.150 100 273 2.7E-45 T 11-10-2018 TVD_10420 efc0b8072f6ddd890e31f86e8f0a8921 298 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 7 289 4.1E-126 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 TVD_10420 efc0b8072f6ddd890e31f86e8f0a8921 298 SUPERFAMILY SSF53335 10 290 5.87E-49 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_10420 efc0b8072f6ddd890e31f86e8f0a8921 298 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 12 283 2.8E-72 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 TVD_10420 efc0b8072f6ddd890e31f86e8f0a8921 298 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 200 206 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TVD_08355 429dd0cef29b5c34c0a44e8be6537096 756 SUPERFAMILY SSF50978 191 438 2.38E-12 T 11-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 TVD_08355 429dd0cef29b5c34c0a44e8be6537096 756 SUPERFAMILY SSF161098 524 741 4.32E-18 T 11-10-2018 IPR035906 MetI-like superfamily TVD_08355 429dd0cef29b5c34c0a44e8be6537096 756 Gene3D G3DSA:2.130.10.10 70 402 1.2E-10 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TVD_08355 429dd0cef29b5c34c0a44e8be6537096 756 Gene3D G3DSA:1.10.3720.10 522 753 1.1E-20 T 11-10-2018 IPR035906 MetI-like superfamily TVD_08355 429dd0cef29b5c34c0a44e8be6537096 756 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 473 750 1.5E-10 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TVD_08355 429dd0cef29b5c34c0a44e8be6537096 756 SUPERFAMILY SSF161098 448 541 2.13E-5 T 11-10-2018 IPR035906 MetI-like superfamily TVD_12210 dbc19b5fa7fa3aee4ecf52a498b8f3f7 236 SUPERFAMILY SSF53335 19 227 2.79E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_12210 dbc19b5fa7fa3aee4ecf52a498b8f3f7 236 Gene3D G3DSA:3.40.50.150 48 235 4.2E-28 T 11-10-2018 TVD_12210 dbc19b5fa7fa3aee4ecf52a498b8f3f7 236 Pfam PF05050 Methyltransferase FkbM domain 65 222 2.7E-20 T 11-10-2018 IPR006342 Methyltransferase FkbM TVD_12210 dbc19b5fa7fa3aee4ecf52a498b8f3f7 236 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 62 195 5.2E-26 T 11-10-2018 IPR006342 Methyltransferase FkbM TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 SUPERFAMILY SSF46689 359 463 1.66E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 Gene3D G3DSA:1.10.10.60 402 464 1.9E-16 T 11-10-2018 TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 Gene3D G3DSA:3.40.50.300 135 315 4.2E-63 T 11-10-2018 TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 Gene3D G3DSA:3.40.50.2300 4 121 4.7E-34 T 11-10-2018 TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 Pfam PF00072 Response regulator receiver domain 6 115 5.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 SMART SM00448 4 115 3.3E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 Gene3D G3DSA:1.10.8.60 316 383 5.7E-19 T 11-10-2018 TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 SUPERFAMILY SSF52172 4 189 1.99E-41 T 11-10-2018 IPR011006 CheY-like superfamily TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 464 7.0E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 444 7.0E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 Pfam PF00158 Sigma-54 interaction domain 145 311 3.8E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 Pfam PF02954 Bacterial regulatory protein, Fis family 421 461 2.4E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 SMART SM00382 165 308 2.8E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_02985 cde5eed5d312f72fcaf519a58ca9174e 464 SUPERFAMILY SSF52540 145 386 1.56E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_05915 27663845b96418125596377854d0e21f 93 SMART SM00530 32 88 3.8E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TVD_05915 27663845b96418125596377854d0e21f 93 Gene3D G3DSA:1.10.260.40 11 93 2.5E-25 T 11-10-2018 TVD_05915 27663845b96418125596377854d0e21f 93 Pfam PF13744 Helix-turn-helix domain 17 89 4.8E-22 T 11-10-2018 IPR039554 HigA2-like, helix-turn-helix domain TVD_05915 27663845b96418125596377854d0e21f 93 SUPERFAMILY SSF47413 18 89 5.33E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TVD_04750 a2e2e15a92fc45293a88da6bbe95f72f 414 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 199 7.2E-21 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TVD_04750 a2e2e15a92fc45293a88da6bbe95f72f 414 SUPERFAMILY SSF53335 235 395 3.38E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_04750 a2e2e15a92fc45293a88da6bbe95f72f 414 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 16 203 3.5E-48 T 11-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 TVD_04750 a2e2e15a92fc45293a88da6bbe95f72f 414 PIRSF PIRSF036428 9 414 7.6E-135 T 11-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 TVD_04750 a2e2e15a92fc45293a88da6bbe95f72f 414 SUPERFAMILY SSF53790 13 215 2.09E-43 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TVD_04750 a2e2e15a92fc45293a88da6bbe95f72f 414 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 244 364 1.7E-29 T 11-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 TVD_04750 a2e2e15a92fc45293a88da6bbe95f72f 414 Gene3D G3DSA:3.40.50.150 239 414 7.8E-65 T 11-10-2018 TVD_04750 a2e2e15a92fc45293a88da6bbe95f72f 414 Gene3D G3DSA:3.40.1010.10 13 113 6.4E-15 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TVD_04245 0ec8a21c9da427451dc19c6114a3c9a3 391 Pfam PF01872 RibD C-terminal domain 156 362 2.2E-41 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 TVD_04245 0ec8a21c9da427451dc19c6114a3c9a3 391 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 155 387 9.0E-46 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 TVD_04245 0ec8a21c9da427451dc19c6114a3c9a3 391 Gene3D G3DSA:3.40.140.10 4 144 2.5E-43 T 11-10-2018 TVD_04245 0ec8a21c9da427451dc19c6114a3c9a3 391 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 97 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TVD_04245 0ec8a21c9da427451dc19c6114a3c9a3 391 SUPERFAMILY SSF53597 154 387 9.62E-53 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 TVD_04245 0ec8a21c9da427451dc19c6114a3c9a3 391 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 12 109 2.1E-20 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain TVD_04245 0ec8a21c9da427451dc19c6114a3c9a3 391 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 16 381 3.9E-105 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 TVD_04245 0ec8a21c9da427451dc19c6114a3c9a3 391 SUPERFAMILY SSF53927 12 154 5.69E-45 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TVD_04245 0ec8a21c9da427451dc19c6114a3c9a3 391 PIRSF PIRSF006769 7 389 1.2E-116 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 TVD_04245 0ec8a21c9da427451dc19c6114a3c9a3 391 Gene3D G3DSA:3.40.430.10 145 390 2.8E-62 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 TVD_08285 23b7efff3cc1adc06941129cd3cdcb23 222 Pfam PF02586 SOS response associated peptidase (SRAP) 1 207 1.6E-51 T 11-10-2018 IPR003738 SOS response associated peptidase (SRAP) TVD_08285 23b7efff3cc1adc06941129cd3cdcb23 222 Gene3D G3DSA:3.90.1680.10 1 219 1.6E-61 T 11-10-2018 IPR036590 SOS response associated peptidase-like TVD_08285 23b7efff3cc1adc06941129cd3cdcb23 222 SUPERFAMILY SSF143081 2 212 2.09E-56 T 11-10-2018 IPR036590 SOS response associated peptidase-like TVD_02410 701544b220c912e546d5d83afd91b523 122 Gene3D G3DSA:2.40.150.20 1 122 1.9E-53 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 TVD_02410 701544b220c912e546d5d83afd91b523 122 SUPERFAMILY SSF50193 1 122 1.09E-49 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 TVD_02410 701544b220c912e546d5d83afd91b523 122 SMART SM01374 1 122 8.8E-83 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TVD_02410 701544b220c912e546d5d83afd91b523 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.1E-53 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TVD_02410 701544b220c912e546d5d83afd91b523 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02410 701544b220c912e546d5d83afd91b523 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 8.4E-57 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 TVD_02410 701544b220c912e546d5d83afd91b523 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.741 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TVD_12660 1fed934f87cfdb719a9fd3257b64ef49 321 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 234 298 1.8E-16 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 TVD_12660 1fed934f87cfdb719a9fd3257b64ef49 321 Gene3D G3DSA:3.30.1150.10 135 314 2.1E-20 T 11-10-2018 TVD_12660 1fed934f87cfdb719a9fd3257b64ef49 321 SUPERFAMILY SSF74653 212 315 8.11E-21 T 11-10-2018 TVD_12660 1fed934f87cfdb719a9fd3257b64ef49 321 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 236 313 1.0E-15 T 11-10-2018 IPR006260 TonB/TolA, C-terminal TVD_07200 94a917fa496d3a3a2f8d2f55f49c7021 1157 SMART SM00481 9 76 1.8E-22 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal TVD_07200 94a917fa496d3a3a2f8d2f55f49c7021 1157 Gene3D G3DSA:1.10.10.1600 429 506 8.0E-31 T 11-10-2018 TVD_07200 94a917fa496d3a3a2f8d2f55f49c7021 1157 Gene3D G3DSA:2.40.50.140 987 1076 3.2E-6 T 11-10-2018 TVD_07200 94a917fa496d3a3a2f8d2f55f49c7021 1157 Gene3D G3DSA:3.20.20.140 1 271 1.1E-86 T 11-10-2018 TVD_07200 94a917fa496d3a3a2f8d2f55f49c7021 1157 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 293 720 4.1E-180 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_07200 94a917fa496d3a3a2f8d2f55f49c7021 1157 Gene3D G3DSA:1.10.150.870 771 874 1.4E-5 T 11-10-2018 TVD_07200 94a917fa496d3a3a2f8d2f55f49c7021 1157 SUPERFAMILY SSF89550 8 264 5.3E-19 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TVD_07200 94a917fa496d3a3a2f8d2f55f49c7021 1157 Pfam PF02811 PHP domain 10 173 4.8E-38 T 11-10-2018 IPR004013 PHP domain GO:0003824 TVD_07200 94a917fa496d3a3a2f8d2f55f49c7021 1157 Pfam PF14579 Helix-hairpin-helix motif 796 885 8.5E-27 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_07200 94a917fa496d3a3a2f8d2f55f49c7021 1157 Pfam PF01336 OB-fold nucleic acid binding domain 992 1057 1.6E-8 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TVD_07200 94a917fa496d3a3a2f8d2f55f49c7021 1157 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 8 1028 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_13030 beda9a297c3c131af53dc63f1f188c7e 204 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 198 25.071 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 TVD_13030 beda9a297c3c131af53dc63f1f188c7e 204 Pfam PF01926 50S ribosome-binding GTPase 27 134 1.5E-18 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_13030 beda9a297c3c131af53dc63f1f188c7e 204 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 9 192 1.7E-65 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 TVD_13030 beda9a297c3c131af53dc63f1f188c7e 204 SUPERFAMILY SSF52540 17 199 2.7E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_13030 beda9a297c3c131af53dc63f1f188c7e 204 Gene3D G3DSA:3.40.50.300 2 203 2.0E-50 T 11-10-2018 TVD_10415 e30b76285699fe5fc2f382ec396fdb4b 347 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 5 236 4.1E-111 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 TVD_10415 e30b76285699fe5fc2f382ec396fdb4b 347 SMART SM00382 52 183 8.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_10415 e30b76285699fe5fc2f382ec396fdb4b 347 SUPERFAMILY SSF52540 21 252 9.57E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10415 e30b76285699fe5fc2f382ec396fdb4b 347 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 2.0E-30 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 TVD_10415 e30b76285699fe5fc2f382ec396fdb4b 347 Gene3D G3DSA:1.10.8.60 183 256 6.1E-28 T 11-10-2018 TVD_10415 e30b76285699fe5fc2f382ec396fdb4b 347 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 347 164.278 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 TVD_10415 e30b76285699fe5fc2f382ec396fdb4b 347 Gene3D G3DSA:3.40.50.300 21 182 2.5E-35 T 11-10-2018 TVD_10415 e30b76285699fe5fc2f382ec396fdb4b 347 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 257 329 2.0E-22 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 TVD_10415 e30b76285699fe5fc2f382ec396fdb4b 347 SUPERFAMILY SSF46785 258 328 2.55E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_10415 e30b76285699fe5fc2f382ec396fdb4b 347 Gene3D G3DSA:1.10.10.10 258 339 1.1E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_10415 e30b76285699fe5fc2f382ec396fdb4b 347 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 326 5.2E-135 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 TVD_12345 87b48e647f73b1c5307ff3912410c8c1 331 PIRSF PIRSF001619 1 319 2.8E-133 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TVD_12345 87b48e647f73b1c5307ff3912410c8c1 331 SMART SM00729 44 256 2.8E-40 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TVD_12345 87b48e647f73b1c5307ff3912410c8c1 331 SMART SM00876 221 313 2.8E-44 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TVD_12345 87b48e647f73b1c5307ff3912410c8c1 331 Gene3D G3DSA:3.20.20.70 5 316 3.8E-127 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_12345 87b48e647f73b1c5307ff3912410c8c1 331 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 221 311 6.5E-18 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TVD_12345 87b48e647f73b1c5307ff3912410c8c1 331 TIGRFAM TIGR00433 bioB: biotin synthase 16 311 1.4E-124 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TVD_12345 87b48e647f73b1c5307ff3912410c8c1 331 Hamap MF_01694 Biotin synthase [bioB]. 6 314 43.257 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 TVD_12345 87b48e647f73b1c5307ff3912410c8c1 331 Pfam PF04055 Radical SAM superfamily 51 207 6.2E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TVD_12345 87b48e647f73b1c5307ff3912410c8c1 331 SUPERFAMILY SSF102114 6 313 3.66E-96 T 11-10-2018 TVD_08665 a43283e09c5e3fdab182798c822eafd5 334 Gene3D G3DSA:3.10.290.10 1 57 2.5E-17 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TVD_08665 a43283e09c5e3fdab182798c822eafd5 334 SMART SM00363 3 60 6.2E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_08665 a43283e09c5e3fdab182798c822eafd5 334 Gene3D G3DSA:3.30.70.1560 126 216 1.3E-46 T 11-10-2018 TVD_08665 a43283e09c5e3fdab182798c822eafd5 334 Pfam PF00849 RNA pseudouridylate synthase 64 185 1.2E-15 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_08665 a43283e09c5e3fdab182798c822eafd5 334 Gene3D G3DSA:3.30.70.580 65 225 1.3E-46 T 11-10-2018 TVD_08665 a43283e09c5e3fdab182798c822eafd5 334 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 68 228 1.4E-50 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 TVD_08665 a43283e09c5e3fdab182798c822eafd5 334 Pfam PF01479 S4 domain 3 48 6.1E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_08665 a43283e09c5e3fdab182798c822eafd5 334 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 TVD_08665 a43283e09c5e3fdab182798c822eafd5 334 SUPERFAMILY SSF55174 4 91 2.36E-15 T 11-10-2018 TVD_08665 a43283e09c5e3fdab182798c822eafd5 334 SUPERFAMILY SSF55120 63 232 8.1E-39 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_02555 654c015021b0f833eed06650a15855e6 435 Pfam PF00171 Aldehyde dehydrogenase family 329 391 3.3E-7 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TVD_02555 654c015021b0f833eed06650a15855e6 435 Pfam PF00171 Aldehyde dehydrogenase family 17 297 3.8E-20 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TVD_02555 654c015021b0f833eed06650a15855e6 435 PIRSF PIRSF000151 12 435 3.0E-178 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 TVD_02555 654c015021b0f833eed06650a15855e6 435 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 19 434 42.402 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TVD_02555 654c015021b0f833eed06650a15855e6 435 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 27 424 3.7E-155 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TVD_02555 654c015021b0f833eed06650a15855e6 435 SUPERFAMILY SSF53720 18 434 8.77E-124 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TVD_02555 654c015021b0f833eed06650a15855e6 435 Gene3D G3DSA:3.40.605.10 27 431 6.1E-170 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TVD_02555 654c015021b0f833eed06650a15855e6 435 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 341 362 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TVD_02555 654c015021b0f833eed06650a15855e6 435 Gene3D G3DSA:3.40.309.10 240 392 6.1E-170 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TVD_09960 279f70307d75a491a8e85171182197f1 351 SUPERFAMILY SSF56935 17 351 3.05E-38 T 11-10-2018 TVD_09960 279f70307d75a491a8e85171182197f1 351 Gene3D G3DSA:2.40.160.10 13 351 4.4E-44 T 11-10-2018 IPR023614 Porin domain superfamily TVD_09960 279f70307d75a491a8e85171182197f1 351 PRINTS PR00184 Neisseria sp. porin signature 89 108 4.9E-7 T 11-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 TVD_09960 279f70307d75a491a8e85171182197f1 351 PRINTS PR00184 Neisseria sp. porin signature 53 78 4.9E-7 T 11-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 TVD_09960 279f70307d75a491a8e85171182197f1 351 PRINTS PR00184 Neisseria sp. porin signature 340 351 4.9E-7 T 11-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 TVD_09960 279f70307d75a491a8e85171182197f1 351 Pfam PF13609 Gram-negative porin 7 333 3.1E-36 T 11-10-2018 TVD_01580 418ad084bcced029375f2690b4adb02b 1314 Gene3D G3DSA:1.20.120.1080 468 565 3.5E-18 T 11-10-2018 TVD_01580 418ad084bcced029375f2690b4adb02b 1314 SUPERFAMILY SSF52540 83 601 8.43E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01580 418ad084bcced029375f2690b4adb02b 1314 Pfam PF04408 Helicase associated domain (HA2) 486 568 1.7E-18 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 TVD_01580 418ad084bcced029375f2690b4adb02b 1314 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 636 711 4.5E-20 T 11-10-2018 IPR011709 Domain of unknown function DUF1605 TVD_01580 418ad084bcced029375f2690b4adb02b 1314 SMART SM00847 483 573 5.1E-33 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 TVD_01580 418ad084bcced029375f2690b4adb02b 1314 SMART SM00382 99 389 0.0014 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_01580 418ad084bcced029375f2690b4adb02b 1314 Gene3D G3DSA:3.40.50.300 42 263 1.7E-72 T 11-10-2018 TVD_01580 418ad084bcced029375f2690b4adb02b 1314 Gene3D G3DSA:3.40.50.300 264 439 7.5E-51 T 11-10-2018 TVD_01580 418ad084bcced029375f2690b4adb02b 1314 Pfam PF00271 Helicase conserved C-terminal domain 305 423 5.3E-10 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_01580 418ad084bcced029375f2690b4adb02b 1314 SMART SM00487 82 270 1.4E-24 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_01580 418ad084bcced029375f2690b4adb02b 1314 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 31 1303 0.0 T 11-10-2018 IPR010222 RNA helicase HrpA GO:0004004 TVD_01580 418ad084bcced029375f2690b4adb02b 1314 Pfam PF11898 Domain of unknown function (DUF3418) 725 1303 9.3E-195 T 11-10-2018 IPR024590 RNA helicase HrpA, C-terminal TVD_01580 418ad084bcced029375f2690b4adb02b 1314 SMART SM00490 323 423 1.2E-12 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_02235 009796e9d36a89886278dab16b92f28c 403 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 403 142.801 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 TVD_02235 009796e9d36a89886278dab16b92f28c 403 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 23 403 2.0E-92 T 11-10-2018 TVD_02235 009796e9d36a89886278dab16b92f28c 403 Pfam PF01960 ArgJ family 19 403 1.2E-137 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 TVD_02235 009796e9d36a89886278dab16b92f28c 403 Gene3D G3DSA:3.10.20.340 274 403 5.3E-43 T 11-10-2018 TVD_02235 009796e9d36a89886278dab16b92f28c 403 SUPERFAMILY SSF56266 14 400 1.44E-131 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 TVD_02235 009796e9d36a89886278dab16b92f28c 403 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 14 403 2.0E-118 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 TVD_02235 009796e9d36a89886278dab16b92f28c 403 Gene3D G3DSA:3.60.70.12 9 273 3.4E-89 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 TVD_13665 5d136653ca551febb8d1051e09a15946 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 4.2E-24 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TVD_13665 5d136653ca551febb8d1051e09a15946 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 369 382 4.2E-24 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TVD_13665 5d136653ca551febb8d1051e09a15946 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 4.2E-24 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TVD_13665 5d136653ca551febb8d1051e09a15946 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 4.2E-24 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TVD_13665 5d136653ca551febb8d1051e09a15946 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 4.2E-24 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TVD_13665 5d136653ca551febb8d1051e09a15946 429 Gene3D G3DSA:3.20.20.10 34 275 1.2E-148 T 11-10-2018 IPR029066 PLP-binding barrel TVD_13665 5d136653ca551febb8d1051e09a15946 429 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site TVD_13665 5d136653ca551febb8d1051e09a15946 429 SUPERFAMILY SSF51419 26 282 3.34E-78 T 11-10-2018 IPR029066 PLP-binding barrel TVD_13665 5d136653ca551febb8d1051e09a15946 429 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 412 41.494 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TVD_13665 5d136653ca551febb8d1051e09a15946 429 Gene3D G3DSA:2.40.37.10 16 408 1.2E-148 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TVD_13665 5d136653ca551febb8d1051e09a15946 429 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 9.5E-29 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TVD_13665 5d136653ca551febb8d1051e09a15946 429 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 9.5E-29 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TVD_13665 5d136653ca551febb8d1051e09a15946 429 PRINTS PR01181 Diaminopimelate decarboxylase signature 379 401 9.5E-29 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TVD_13665 5d136653ca551febb8d1051e09a15946 429 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 9.5E-29 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TVD_13665 5d136653ca551febb8d1051e09a15946 429 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 280 1.4E-70 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 TVD_13665 5d136653ca551febb8d1051e09a15946 429 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 30 369 4.5E-25 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 TVD_13665 5d136653ca551febb8d1051e09a15946 429 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 411 6.8E-154 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TVD_13665 5d136653ca551febb8d1051e09a15946 429 SUPERFAMILY SSF50621 255 412 5.44E-53 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TVD_10005 1783af45aafbec53f58a12a6302801ef 171 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 152 45.359 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TVD_10005 1783af45aafbec53f58a12a6302801ef 171 Gene3D G3DSA:3.30.420.10 3 158 2.3E-49 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TVD_10005 1783af45aafbec53f58a12a6302801ef 171 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 155 2.3E-51 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TVD_10005 1783af45aafbec53f58a12a6302801ef 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 1.1E-36 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TVD_10005 1783af45aafbec53f58a12a6302801ef 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.1E-36 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TVD_10005 1783af45aafbec53f58a12a6302801ef 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 1.1E-36 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TVD_10005 1783af45aafbec53f58a12a6302801ef 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 1.1E-36 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TVD_10005 1783af45aafbec53f58a12a6302801ef 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 137 149 1.1E-36 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TVD_10005 1783af45aafbec53f58a12a6302801ef 171 SUPERFAMILY SSF53098 2 154 6.83E-51 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_10005 1783af45aafbec53f58a12a6302801ef 171 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 149 1.1E-49 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TVD_10005 1783af45aafbec53f58a12a6302801ef 171 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 146 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 TVD_01300 127589406066f0f00be23cf9c68f774b 733 SMART SM00387 610 724 2.3E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_01300 127589406066f0f00be23cf9c68f774b 733 PRINTS PR00344 Bacterial sensor protein C-terminal signature 671 681 6.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_01300 127589406066f0f00be23cf9c68f774b 733 PRINTS PR00344 Bacterial sensor protein C-terminal signature 708 721 6.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_01300 127589406066f0f00be23cf9c68f774b 733 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 667 6.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_01300 127589406066f0f00be23cf9c68f774b 733 PRINTS PR00344 Bacterial sensor protein C-terminal signature 682 700 6.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_01300 127589406066f0f00be23cf9c68f774b 733 SMART SM00388 498 570 2.7E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_01300 127589406066f0f00be23cf9c68f774b 733 Gene3D G3DSA:3.30.565.10 569 727 2.4E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_01300 127589406066f0f00be23cf9c68f774b 733 SUPERFAMILY SSF158472 309 358 1.15E-10 T 11-10-2018 TVD_01300 127589406066f0f00be23cf9c68f774b 733 Gene3D G3DSA:1.20.1480.50 278 365 4.3E-12 T 11-10-2018 TVD_01300 127589406066f0f00be23cf9c68f774b 733 SMART SM00304 309 361 5.6E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_01300 127589406066f0f00be23cf9c68f774b 733 SUPERFAMILY SSF47384 494 567 1.22E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TVD_01300 127589406066f0f00be23cf9c68f774b 733 SUPERFAMILY SSF55785 364 479 4.65E-8 T 11-10-2018 IPR035965 PAS domain superfamily TVD_01300 127589406066f0f00be23cf9c68f774b 733 SUPERFAMILY SSF55874 559 724 1.03E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_01300 127589406066f0f00be23cf9c68f774b 733 Gene3D G3DSA:3.30.450.20 366 487 4.1E-7 T 11-10-2018 TVD_01300 127589406066f0f00be23cf9c68f774b 733 Gene3D G3DSA:1.10.287.130 488 567 4.1E-11 T 11-10-2018 TVD_01300 127589406066f0f00be23cf9c68f774b 733 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 610 723 1.2E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_01300 127589406066f0f00be23cf9c68f774b 733 Pfam PF00512 His Kinase A (phospho-acceptor) domain 499 566 1.0E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_01300 127589406066f0f00be23cf9c68f774b 733 PIRSF PIRSF037532 5 726 2.2E-213 T 11-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator TVD_01300 127589406066f0f00be23cf9c68f774b 733 Pfam PF00672 HAMP domain 309 357 2.5E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_06540 5df71ab2d3cc6a9fa395bd3054178ef8 239 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 8 236 34.931 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_06540 5df71ab2d3cc6a9fa395bd3054178ef8 239 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 62 75 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_06540 5df71ab2d3cc6a9fa395bd3054178ef8 239 Gene3D G3DSA:3.20.20.70 4 239 1.4E-79 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_06540 5df71ab2d3cc6a9fa395bd3054178ef8 239 SUPERFAMILY SSF51366 9 232 1.88E-69 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TVD_06540 5df71ab2d3cc6a9fa395bd3054178ef8 239 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 11 230 1.8E-57 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_06540 5df71ab2d3cc6a9fa395bd3054178ef8 239 SMART SM00934 10 231 1.7E-85 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_06540 5df71ab2d3cc6a9fa395bd3054178ef8 239 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 10 230 1.5E-45 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_00855 1447b2464e8e8c46dbdf0079a3ce5caa 277 Gene3D G3DSA:3.30.540.10 9 160 2.9E-42 T 11-10-2018 TVD_00855 1447b2464e8e8c46dbdf0079a3ce5caa 277 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 13 263 40.944 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 TVD_00855 1447b2464e8e8c46dbdf0079a3ce5caa 277 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 91 104 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site TVD_00855 1447b2464e8e8c46dbdf0079a3ce5caa 277 SUPERFAMILY SSF56655 13 268 1.14E-75 T 11-10-2018 TVD_00855 1447b2464e8e8c46dbdf0079a3ce5caa 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 45 65 1.9E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_00855 1447b2464e8e8c46dbdf0079a3ce5caa 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 67 83 1.9E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_00855 1447b2464e8e8c46dbdf0079a3ce5caa 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 91 107 1.9E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_00855 1447b2464e8e8c46dbdf0079a3ce5caa 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 218 242 1.9E-11 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_00855 1447b2464e8e8c46dbdf0079a3ce5caa 277 Gene3D G3DSA:3.40.190.80 162 264 1.1E-35 T 11-10-2018 TVD_00855 1447b2464e8e8c46dbdf0079a3ce5caa 277 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 221 235 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 TVD_00855 1447b2464e8e8c46dbdf0079a3ce5caa 277 Pfam PF00459 Inositol monophosphatase family 19 254 2.7E-46 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_00855 1447b2464e8e8c46dbdf0079a3ce5caa 277 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 14 260 2.0E-91 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 TVD_05620 05acf3417767b932c7a1426cc411c4b9 358 Gene3D G3DSA:3.40.1780.10 14 334 2.9E-111 T 11-10-2018 TVD_05620 05acf3417767b932c7a1426cc411c4b9 358 SUPERFAMILY SSF111337 1 336 1.96E-128 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TVD_05620 05acf3417767b932c7a1426cc411c4b9 358 Gene3D G3DSA:2.40.10.240 62 159 2.9E-111 T 11-10-2018 TVD_05620 05acf3417767b932c7a1426cc411c4b9 358 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 335 4.2E-127 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TVD_05620 05acf3417767b932c7a1426cc411c4b9 358 Pfam PF02547 Queuosine biosynthesis protein 4 336 2.1E-129 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TVD_05620 05acf3417767b932c7a1426cc411c4b9 358 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 337 45.653 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 TVD_06225 8265c818e4339e135ac23edea53a7014 1291 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1290 1.1E-92 T 11-10-2018 TVD_06225 8265c818e4339e135ac23edea53a7014 1291 Pfam PF02769 AIR synthase related protein, C-terminal domain 828 953 6.4E-9 T 11-10-2018 IPR010918 PurM-like, C-terminal domain TVD_06225 8265c818e4339e135ac23edea53a7014 1291 Pfam PF02769 AIR synthase related protein, C-terminal domain 435 591 4.3E-27 T 11-10-2018 IPR010918 PurM-like, C-terminal domain TVD_06225 8265c818e4339e135ac23edea53a7014 1291 Gene3D G3DSA:3.40.50.880 984 1291 2.0E-120 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_06225 8265c818e4339e135ac23edea53a7014 1291 Gene3D G3DSA:3.90.650.10 812 983 1.7E-28 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TVD_06225 8265c818e4339e135ac23edea53a7014 1291 Gene3D G3DSA:3.90.650.10 422 608 3.6E-56 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TVD_06225 8265c818e4339e135ac23edea53a7014 1291 SUPERFAMILY SSF109736 163 221 3.14E-18 T 11-10-2018 TVD_06225 8265c818e4339e135ac23edea53a7014 1291 Gene3D G3DSA:3.30.1330.10 215 421 2.1E-39 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TVD_06225 8265c818e4339e135ac23edea53a7014 1291 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 6 1289 0.0 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TVD_06225 8265c818e4339e135ac23edea53a7014 1291 Gene3D G3DSA:3.30.1330.10 622 811 3.9E-21 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TVD_06225 8265c818e4339e135ac23edea53a7014 1291 SUPERFAMILY SSF82697 3 153 1.52E-35 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TVD_06225 8265c818e4339e135ac23edea53a7014 1291 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1291 20.016 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TVD_06225 8265c818e4339e135ac23edea53a7014 1291 SUPERFAMILY SSF52317 1037 1289 4.8E-86 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_06225 8265c818e4339e135ac23edea53a7014 1291 Gene3D G3DSA:1.10.8.750 154 214 6.8E-23 T 11-10-2018 TVD_06225 8265c818e4339e135ac23edea53a7014 1291 SUPERFAMILY SSF56042 434 657 6.58E-50 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TVD_06225 8265c818e4339e135ac23edea53a7014 1291 SMART SM01211 1040 1290 3.4E-131 T 11-10-2018 TVD_06225 8265c818e4339e135ac23edea53a7014 1291 SUPERFAMILY SSF55326 222 429 5.23E-56 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TVD_06225 8265c818e4339e135ac23edea53a7014 1291 SUPERFAMILY SSF56042 825 1012 2.09E-41 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TVD_06225 8265c818e4339e135ac23edea53a7014 1291 SUPERFAMILY SSF55326 624 819 8.11E-58 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 PIRSF PIRSF000350 72 589 2.7E-83 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 130 585 3.7E-148 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 SUPERFAMILY SSF55424 467 588 4.3E-37 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 Gene3D G3DSA:3.50.50.60 131 456 2.1E-112 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 317 6.0E-38 T 11-10-2018 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 417 439 6.0E-38 T 11-10-2018 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 388 404 6.0E-38 T 11-10-2018 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 150 6.0E-38 T 11-10-2018 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 278 6.0E-38 T 11-10-2018 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 SUPERFAMILY SSF51230 4 94 6.89E-21 T 11-10-2018 IPR011053 Single hybrid motif TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 Gene3D G3DSA:3.30.390.30 470 590 5.4E-41 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 Gene3D G3DSA:3.50.50.60 272 395 2.1E-112 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 471 576 4.4E-32 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 SUPERFAMILY SSF51905 125 462 5.83E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 130 452 1.5E-59 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 164 174 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 Pfam PF00364 Biotin-requiring enzyme 5 76 1.2E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 Gene3D G3DSA:2.40.50.100 4 82 2.9E-21 T 11-10-2018 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 467 488 6.2E-71 T 11-10-2018 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 324 6.2E-71 T 11-10-2018 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 553 573 6.2E-71 T 11-10-2018 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 130 152 6.2E-71 T 11-10-2018 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 163 178 6.2E-71 T 11-10-2018 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 439 6.2E-71 T 11-10-2018 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 531 546 6.2E-71 T 11-10-2018 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 389 403 6.2E-71 T 11-10-2018 TVD_12040 f0d3506cc85f3e1937aa8d84657e0578 595 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 272 6.2E-71 T 11-10-2018 TVD_09335 047252cc6b2e20065abe0e4417f5db29 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 3.7E-16 T 11-10-2018 TVD_09335 047252cc6b2e20065abe0e4417f5db29 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 3.7E-16 T 11-10-2018 TVD_09335 047252cc6b2e20065abe0e4417f5db29 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 3.7E-16 T 11-10-2018 TVD_09335 047252cc6b2e20065abe0e4417f5db29 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 105 125 3.7E-16 T 11-10-2018 TVD_09335 047252cc6b2e20065abe0e4417f5db29 506 Pfam PF00361 Proton-conducting membrane transporter 128 422 1.5E-52 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_09335 047252cc6b2e20065abe0e4417f5db29 506 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 71 116 6.1E-6 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_07435 383925de3ec5ce88caeb7af7ceca387d 256 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 27.772 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 TVD_07435 383925de3ec5ce88caeb7af7ceca387d 256 SUPERFAMILY SSF53335 17 246 3.19E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_07435 383925de3ec5ce88caeb7af7ceca387d 256 Pfam PF04445 Putative SAM-dependent methyltransferase 28 246 9.7E-51 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 TVD_07435 383925de3ec5ce88caeb7af7ceca387d 256 Gene3D G3DSA:3.40.50.150 59 254 2.2E-52 T 11-10-2018 TVD_09205 a757248d63a906536d8aaf4219a8f642 348 Pfam PF00154 recA bacterial DNA recombination protein 7 268 1.6E-145 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TVD_09205 a757248d63a906536d8aaf4219a8f642 348 ProSitePatterns PS00321 recA signature. 213 221 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 TVD_09205 a757248d63a906536d8aaf4219a8f642 348 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 3.3E-175 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TVD_09205 a757248d63a906536d8aaf4219a8f642 348 SMART SM00382 57 228 1.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_09205 a757248d63a906536d8aaf4219a8f642 348 SUPERFAMILY SSF52540 3 267 1.09E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_09205 a757248d63a906536d8aaf4219a8f642 348 Hamap MF_00268 Protein RecA [recA]. 5 329 52.52 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TVD_09205 a757248d63a906536d8aaf4219a8f642 348 Gene3D G3DSA:3.30.250.10 268 345 9.7E-28 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal TVD_09205 a757248d63a906536d8aaf4219a8f642 348 SUPERFAMILY SSF54752 268 324 1.57E-21 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal TVD_09205 a757248d63a906536d8aaf4219a8f642 348 PRINTS PR00142 RecA protein signature 127 156 1.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TVD_09205 a757248d63a906536d8aaf4219a8f642 348 PRINTS PR00142 RecA protein signature 243 272 1.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TVD_09205 a757248d63a906536d8aaf4219a8f642 348 PRINTS PR00142 RecA protein signature 210 238 1.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TVD_09205 a757248d63a906536d8aaf4219a8f642 348 PRINTS PR00142 RecA protein signature 93 122 1.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TVD_09205 a757248d63a906536d8aaf4219a8f642 348 PRINTS PR00142 RecA protein signature 297 314 1.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TVD_09205 a757248d63a906536d8aaf4219a8f642 348 PRINTS PR00142 RecA protein signature 165 194 1.2E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TVD_09205 a757248d63a906536d8aaf4219a8f642 348 Gene3D G3DSA:3.40.50.300 26 267 5.8E-82 T 11-10-2018 TVD_03360 f22276bd0dadc62679d6c93a4b302f3c 414 Gene3D G3DSA:3.40.50.150 218 385 1.3E-16 T 11-10-2018 TVD_03360 f22276bd0dadc62679d6c93a4b302f3c 414 Pfam PF08241 Methyltransferase domain 291 340 2.7E-8 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TVD_03360 f22276bd0dadc62679d6c93a4b302f3c 414 SUPERFAMILY SSF53335 214 388 2.05E-18 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 32 176 1.8E-40 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 164 175 4.9E-19 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 285 294 4.9E-19 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 4.9E-19 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 78 97 4.9E-19 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 184 330 2.6E-24 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 31 334 40.712 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 32 332 5.7E-93 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 78 85 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 313 327 4.0E-32 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 248 257 4.0E-32 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 163 180 4.0E-32 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 68 90 4.0E-32 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 289 294 4.0E-32 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 PRINTS PR00101 Aspartate carbamoyltransferase signature 106 115 4.0E-32 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 Gene3D G3DSA:3.40.50.1370 164 311 7.0E-91 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 SUPERFAMILY SSF53671 31 333 3.4E-93 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TVD_12680 93eb16f5c0408aa105f5709376f38fc4 337 Gene3D G3DSA:3.40.50.1370 36 327 7.0E-91 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 SMART SM00091 239 303 2.8E-4 T 11-10-2018 IPR000014 PAS domain TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 Gene3D G3DSA:3.30.70.270 533 717 4.1E-54 T 11-10-2018 TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 SUPERFAMILY SSF141868 720 965 1.44E-84 T 11-10-2018 IPR035919 EAL domain superfamily TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 537 703 8.5E-39 T 11-10-2018 IPR000160 GGDEF domain TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 Gene3D G3DSA:3.30.450.40 379 531 5.2E-10 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 SUPERFAMILY SSF55073 544 706 8.63E-45 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 Gene3D G3DSA:3.30.450.20 224 378 1.3E-20 T 11-10-2018 TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 SUPERFAMILY SSF55785 229 370 1.94E-10 T 11-10-2018 IPR035965 PAS domain superfamily TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 SUPERFAMILY SSF55781 391 539 1.31E-15 T 11-10-2018 TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 Pfam PF08448 PAS fold 245 374 1.3E-5 T 11-10-2018 IPR013656 PAS fold-4 TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 Pfam PF00563 EAL domain 723 954 2.7E-72 T 11-10-2018 IPR001633 EAL domain TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 SMART SM00267 528 705 4.3E-56 T 11-10-2018 IPR000160 GGDEF domain TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 SMART SM00052 715 959 8.6E-103 T 11-10-2018 IPR001633 EAL domain TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 SMART SM00065 390 536 4.7E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 235 275 2.7E-6 T 11-10-2018 IPR000014 PAS domain TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 Pfam PF01590 GAF domain 391 526 1.2E-5 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 Pfam PF00990 Diguanylate cyclase, GGDEF domain 539 699 2.4E-43 T 11-10-2018 IPR000160 GGDEF domain TVD_11200 4e69e5070117b5064ec10ebeb6cee5cc 967 Gene3D G3DSA:3.20.20.450 718 965 1.9E-95 T 11-10-2018 IPR035919 EAL domain superfamily TVD_10470 8e5568d751bb153931b96a7412db92fe 530 Pfam PF00009 Elongation factor Tu GTP binding domain 9 273 1.0E-49 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_10470 8e5568d751bb153931b96a7412db92fe 530 Pfam PF16658 Class II release factor RF3, C-terminal domain 383 510 3.0E-45 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal TVD_10470 8e5568d751bb153931b96a7412db92fe 530 Gene3D G3DSA:3.40.50.300 107 271 8.3E-113 T 11-10-2018 TVD_10470 8e5568d751bb153931b96a7412db92fe 530 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 523 53.363 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 TVD_10470 8e5568d751bb153931b96a7412db92fe 530 Gene3D G3DSA:3.40.50.300 69 375 8.3E-113 T 11-10-2018 TVD_10470 8e5568d751bb153931b96a7412db92fe 530 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site TVD_10470 8e5568d751bb153931b96a7412db92fe 530 SUPERFAMILY SSF50447 257 389 3.09E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TVD_10470 8e5568d751bb153931b96a7412db92fe 530 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 156 1.2E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TVD_10470 8e5568d751bb153931b96a7412db92fe 530 PRINTS PR00315 GTP-binding elongation factor signature 98 109 2.4E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_10470 8e5568d751bb153931b96a7412db92fe 530 PRINTS PR00315 GTP-binding elongation factor signature 62 70 2.4E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_10470 8e5568d751bb153931b96a7412db92fe 530 PRINTS PR00315 GTP-binding elongation factor signature 134 143 2.4E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_10470 8e5568d751bb153931b96a7412db92fe 530 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.4E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_10470 8e5568d751bb153931b96a7412db92fe 530 PRINTS PR00315 GTP-binding elongation factor signature 82 92 2.4E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_10470 8e5568d751bb153931b96a7412db92fe 530 SUPERFAMILY SSF52540 7 273 4.0E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10470 8e5568d751bb153931b96a7412db92fe 530 SUPERFAMILY SSF54980 389 464 8.63E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like TVD_10470 8e5568d751bb153931b96a7412db92fe 530 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 525 2.2E-262 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 TVD_10470 8e5568d751bb153931b96a7412db92fe 530 Pfam PF03144 Elongation factor Tu domain 2 310 376 9.2E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TVD_10470 8e5568d751bb153931b96a7412db92fe 530 Gene3D G3DSA:3.30.70.3280 386 525 2.2E-51 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily TVD_06555 de36ec97f5c176b389ce605c166aa380 228 SUPERFAMILY SSF144091 14 220 7.06E-39 T 11-10-2018 TVD_06555 de36ec97f5c176b389ce605c166aa380 228 SMART SM01160 58 153 0.0064 T 11-10-2018 TVD_06555 de36ec97f5c176b389ce605c166aa380 228 Pfam PF01694 Rhomboid family 65 216 1.4E-30 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 TVD_06555 de36ec97f5c176b389ce605c166aa380 228 Gene3D G3DSA:1.20.1540.10 11 216 1.1E-25 T 11-10-2018 IPR035952 Rhomboid-like superfamily TVD_13700 e0edb75ba154a782debe6f5478b9359e 264 Pfam PF00977 Histidine biosynthesis protein 5 238 2.9E-90 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 TVD_13700 e0edb75ba154a782debe6f5478b9359e 264 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 255 6.3E-115 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 TVD_13700 e0edb75ba154a782debe6f5478b9359e 264 Gene3D G3DSA:3.20.20.70 1 263 7.5E-110 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_13700 e0edb75ba154a782debe6f5478b9359e 264 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 49.002 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 TVD_13700 e0edb75ba154a782debe6f5478b9359e 264 SUPERFAMILY SSF51366 1 255 1.41E-82 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TVD_01880 ec7bcf6b73a52a2535eec7a393a90969 494 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 374 393 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TVD_01880 ec7bcf6b73a52a2535eec7a393a90969 494 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 484 3.2E-147 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TVD_01880 ec7bcf6b73a52a2535eec7a393a90969 494 Gene3D G3DSA:1.10.10.60 427 484 5.6E-23 T 11-10-2018 TVD_01880 ec7bcf6b73a52a2535eec7a393a90969 494 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 49 1.7E-15 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TVD_01880 ec7bcf6b73a52a2535eec7a393a90969 494 Pfam PF04552 Sigma-54, DNA binding domain 327 485 3.1E-68 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding TVD_01880 ec7bcf6b73a52a2535eec7a393a90969 494 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 465 472 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TVD_01880 ec7bcf6b73a52a2535eec7a393a90969 494 PRINTS PR00045 Sigma-54 factor signature 402 413 1.3E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TVD_01880 ec7bcf6b73a52a2535eec7a393a90969 494 PRINTS PR00045 Sigma-54 factor signature 386 398 1.3E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TVD_01880 ec7bcf6b73a52a2535eec7a393a90969 494 PRINTS PR00045 Sigma-54 factor signature 460 478 1.3E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TVD_01880 ec7bcf6b73a52a2535eec7a393a90969 494 PRINTS PR00045 Sigma-54 factor signature 195 212 1.3E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TVD_01880 ec7bcf6b73a52a2535eec7a393a90969 494 Pfam PF04963 Sigma-54 factor, core binding domain 123 313 5.2E-57 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 TVD_01880 ec7bcf6b73a52a2535eec7a393a90969 494 PIRSF PIRSF000774 1 487 9.5E-153 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 TVD_01880 ec7bcf6b73a52a2535eec7a393a90969 494 Gene3D G3DSA:1.10.10.1330 124 268 3.2E-22 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily TVD_07915 44cc38730c948f9a607420a9f2d4a907 271 SUPERFAMILY SSF53335 72 263 2.15E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_07915 44cc38730c948f9a607420a9f2d4a907 271 Pfam PF03705 CheR methyltransferase, all-alpha domain 6 55 1.3E-8 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal TVD_07915 44cc38730c948f9a607420a9f2d4a907 271 Gene3D G3DSA:1.10.155.10 1 70 3.7E-8 T 11-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily TVD_07915 44cc38730c948f9a607420a9f2d4a907 271 SMART SM00138 4 267 2.1E-86 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_07915 44cc38730c948f9a607420a9f2d4a907 271 Gene3D G3DSA:3.40.50.150 71 265 5.3E-55 T 11-10-2018 TVD_07915 44cc38730c948f9a607420a9f2d4a907 271 PRINTS PR00996 Glutamate methyltransferase family signature 139 155 1.6E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_07915 44cc38730c948f9a607420a9f2d4a907 271 PRINTS PR00996 Glutamate methyltransferase family signature 65 77 1.6E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_07915 44cc38730c948f9a607420a9f2d4a907 271 PRINTS PR00996 Glutamate methyltransferase family signature 26 39 1.6E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_07915 44cc38730c948f9a607420a9f2d4a907 271 PRINTS PR00996 Glutamate methyltransferase family signature 207 221 1.6E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_07915 44cc38730c948f9a607420a9f2d4a907 271 PRINTS PR00996 Glutamate methyltransferase family signature 226 249 1.6E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_07915 44cc38730c948f9a607420a9f2d4a907 271 PRINTS PR00996 Glutamate methyltransferase family signature 102 122 1.6E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_07915 44cc38730c948f9a607420a9f2d4a907 271 SUPERFAMILY SSF47757 2 71 1.26E-13 T 11-10-2018 TVD_07915 44cc38730c948f9a607420a9f2d4a907 271 Pfam PF01739 CheR methyltransferase, SAM binding domain 72 262 1.4E-56 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal TVD_01000 110f25b4cbe5cbefb5b5a94fa01a6f53 351 Gene3D G3DSA:1.10.287.470 98 158 8.9E-60 T 11-10-2018 TVD_01000 110f25b4cbe5cbefb5b5a94fa01a6f53 351 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 346 2.7E-61 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TVD_01000 110f25b4cbe5cbefb5b5a94fa01a6f53 351 Gene3D G3DSA:2.40.30.170 52 273 8.9E-60 T 11-10-2018 TVD_01000 110f25b4cbe5cbefb5b5a94fa01a6f53 351 Gene3D G3DSA:2.40.50.100 64 190 8.9E-60 T 11-10-2018 TVD_01000 110f25b4cbe5cbefb5b5a94fa01a6f53 351 Gene3D G3DSA:2.40.420.20 42 330 8.9E-60 T 11-10-2018 TVD_01000 110f25b4cbe5cbefb5b5a94fa01a6f53 351 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 252 3.4E-20 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TVD_01000 110f25b4cbe5cbefb5b5a94fa01a6f53 351 SUPERFAMILY SSF111369 56 268 1.7E-23 T 11-10-2018 TVD_10570 6abe152487b9cc0bb54f68401c3daea4 347 SUPERFAMILY SSF55681 9 241 1.16E-36 T 11-10-2018 TVD_10570 6abe152487b9cc0bb54f68401c3daea4 347 Gene3D G3DSA:3.30.930.10 9 249 3.3E-27 T 11-10-2018 TVD_10570 6abe152487b9cc0bb54f68401c3daea4 347 Pfam PF03099 Biotin/lipoate A/B protein ligase family 61 148 1.3E-4 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TVD_11100 9f37aa034b51415982cc5cc497156f8d 132 Hamap MF_00791 Protein ApaG [apaG]. 7 132 33.716 T 11-10-2018 IPR023065 Uncharacterised protein family ApaG TVD_11100 9f37aa034b51415982cc5cc497156f8d 132 Gene3D G3DSA:2.60.40.1470 3 132 8.9E-50 T 11-10-2018 IPR036767 ApaG domain superfamily TVD_11100 9f37aa034b51415982cc5cc497156f8d 132 SUPERFAMILY SSF110069 12 132 2.09E-49 T 11-10-2018 IPR036767 ApaG domain superfamily TVD_11100 9f37aa034b51415982cc5cc497156f8d 132 Pfam PF04379 ApaG domain 25 109 1.8E-34 T 11-10-2018 IPR007474 ApaG domain TVD_05405 56cf73269b75fcc48bf4d128eee9ecc7 770 Gene3D G3DSA:2.30.30.60 570 618 1.6E-13 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily TVD_05405 56cf73269b75fcc48bf4d128eee9ecc7 770 SUPERFAMILY SSF82689 626 721 3.53E-19 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 TVD_05405 56cf73269b75fcc48bf4d128eee9ecc7 770 SUPERFAMILY SSF82861 468 552 1.12E-12 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 TVD_05405 56cf73269b75fcc48bf4d128eee9ecc7 770 Gene3D G3DSA:3.30.70.100 622 709 2.6E-22 T 11-10-2018 TVD_05405 56cf73269b75fcc48bf4d128eee9ecc7 770 SUPERFAMILY SSF50182 554 616 2.35E-10 T 11-10-2018 IPR010920 LSM domain superfamily TVD_05405 56cf73269b75fcc48bf4d128eee9ecc7 770 Pfam PF00924 Mechanosensitive ion channel 511 711 4.2E-36 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TVD_04130 11b436c7369527248cd3723388eb3097 1180 SMART SM00086 958 1000 6.2E-8 T 11-10-2018 IPR001610 PAC motif TVD_04130 11b436c7369527248cd3723388eb3097 1180 SMART SM00086 562 604 0.24 T 11-10-2018 IPR001610 PAC motif TVD_04130 11b436c7369527248cd3723388eb3097 1180 SMART SM00086 689 731 3.0E-5 T 11-10-2018 IPR001610 PAC motif TVD_04130 11b436c7369527248cd3723388eb3097 1180 SMART SM00086 437 479 0.83 T 11-10-2018 IPR001610 PAC motif TVD_04130 11b436c7369527248cd3723388eb3097 1180 SMART SM00086 312 353 200.0 T 11-10-2018 IPR001610 PAC motif TVD_04130 11b436c7369527248cd3723388eb3097 1180 SMART SM00086 831 873 19.0 T 11-10-2018 IPR001610 PAC motif TVD_04130 11b436c7369527248cd3723388eb3097 1180 SUPERFAMILY SSF55785 228 351 4.89E-9 T 11-10-2018 IPR035965 PAS domain superfamily TVD_04130 11b436c7369527248cd3723388eb3097 1180 SUPERFAMILY SSF55785 352 475 3.32E-17 T 11-10-2018 IPR035965 PAS domain superfamily TVD_04130 11b436c7369527248cd3723388eb3097 1180 SMART SM00091 358 425 0.6 T 11-10-2018 IPR000014 PAS domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 SMART SM00091 616 684 0.0027 T 11-10-2018 IPR000014 PAS domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 SMART SM00091 739 805 57.0 T 11-10-2018 IPR000014 PAS domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 SMART SM00091 120 187 0.018 T 11-10-2018 IPR000014 PAS domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 SMART SM00091 885 952 0.0098 T 11-10-2018 IPR000014 PAS domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 SMART SM00091 484 556 22.0 T 11-10-2018 IPR000014 PAS domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 SMART SM00091 6 72 0.0039 T 11-10-2018 IPR000014 PAS domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 SMART SM00091 239 309 27.0 T 11-10-2018 IPR000014 PAS domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 SUPERFAMILY SSF55785 11 106 1.24E-7 T 11-10-2018 IPR035965 PAS domain superfamily TVD_04130 11b436c7369527248cd3723388eb3097 1180 SUPERFAMILY SSF55073 1023 1174 9.42E-46 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_04130 11b436c7369527248cd3723388eb3097 1180 Gene3D G3DSA:3.30.450.20 349 477 1.6E-19 T 11-10-2018 TVD_04130 11b436c7369527248cd3723388eb3097 1180 Pfam PF08447 PAS fold 512 597 3.7E-11 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_04130 11b436c7369527248cd3723388eb3097 1180 Pfam PF08447 PAS fold 906 994 2.1E-18 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_04130 11b436c7369527248cd3723388eb3097 1180 Pfam PF08447 PAS fold 639 725 1.5E-19 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_04130 11b436c7369527248cd3723388eb3097 1180 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1018 1171 2.9E-44 T 11-10-2018 IPR000160 GGDEF domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 Gene3D G3DSA:3.30.450.20 613 684 3.5E-21 T 11-10-2018 TVD_04130 11b436c7369527248cd3723388eb3097 1180 SUPERFAMILY SSF55785 507 613 6.44E-12 T 11-10-2018 IPR035965 PAS domain superfamily TVD_04130 11b436c7369527248cd3723388eb3097 1180 SMART SM00267 1007 1175 5.2E-66 T 11-10-2018 IPR000160 GGDEF domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 Pfam PF08448 PAS fold 14 106 7.1E-7 T 11-10-2018 IPR013656 PAS fold-4 TVD_04130 11b436c7369527248cd3723388eb3097 1180 Pfam PF08448 PAS fold 366 480 2.6E-10 T 11-10-2018 IPR013656 PAS fold-4 TVD_04130 11b436c7369527248cd3723388eb3097 1180 Pfam PF08448 PAS fold 139 233 3.1E-9 T 11-10-2018 IPR013656 PAS fold-4 TVD_04130 11b436c7369527248cd3723388eb3097 1180 Gene3D G3DSA:3.30.450.20 112 229 4.4E-16 T 11-10-2018 TVD_04130 11b436c7369527248cd3723388eb3097 1180 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 359 486 3.2E-7 T 11-10-2018 IPR000014 PAS domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 881 1007 2.4E-22 T 11-10-2018 IPR000014 PAS domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 122 238 3.0E-14 T 11-10-2018 IPR000014 PAS domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 616 738 6.5E-10 T 11-10-2018 IPR000014 PAS domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 Gene3D G3DSA:3.30.450.20 7 111 9.6E-7 T 11-10-2018 TVD_04130 11b436c7369527248cd3723388eb3097 1180 SUPERFAMILY SSF55785 870 998 1.52E-25 T 11-10-2018 IPR035965 PAS domain superfamily TVD_04130 11b436c7369527248cd3723388eb3097 1180 SUPERFAMILY SSF55785 139 239 6.84E-17 T 11-10-2018 IPR035965 PAS domain superfamily TVD_04130 11b436c7369527248cd3723388eb3097 1180 SUPERFAMILY SSF55785 601 729 4.71E-21 T 11-10-2018 IPR035965 PAS domain superfamily TVD_04130 11b436c7369527248cd3723388eb3097 1180 Gene3D G3DSA:3.30.450.20 732 877 4.9E-12 T 11-10-2018 TVD_04130 11b436c7369527248cd3723388eb3097 1180 SUPERFAMILY SSF55785 754 882 2.86E-9 T 11-10-2018 IPR035965 PAS domain superfamily TVD_04130 11b436c7369527248cd3723388eb3097 1180 Gene3D G3DSA:2.10.70.100 686 731 8.3E-15 T 11-10-2018 TVD_04130 11b436c7369527248cd3723388eb3097 1180 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1014 1174 4.6E-49 T 11-10-2018 IPR000160 GGDEF domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 Gene3D G3DSA:3.30.450.20 482 602 2.7E-20 T 11-10-2018 TVD_04130 11b436c7369527248cd3723388eb3097 1180 Gene3D G3DSA:3.30.70.270 1003 1175 4.0E-58 T 11-10-2018 TVD_04130 11b436c7369527248cd3723388eb3097 1180 Gene3D G3DSA:3.30.450.20 244 348 1.4E-7 T 11-10-2018 TVD_04130 11b436c7369527248cd3723388eb3097 1180 Gene3D G3DSA:3.30.450.20 878 998 2.4E-31 T 11-10-2018 TVD_04130 11b436c7369527248cd3723388eb3097 1180 Pfam PF13426 PAS domain 823 872 0.8 T 11-10-2018 IPR000014 PAS domain TVD_04130 11b436c7369527248cd3723388eb3097 1180 Pfam PF13426 PAS domain 258 352 2.6E-6 T 11-10-2018 IPR000014 PAS domain TVD_01950 dbc08b4ba50c63b650518a0b3e7847ce 105 Gene3D G3DSA:3.30.750.24 7 105 1.2E-12 T 11-10-2018 IPR036513 STAS domain superfamily TVD_01950 dbc08b4ba50c63b650518a0b3e7847ce 105 SUPERFAMILY SSF52091 12 97 9.81E-14 T 11-10-2018 IPR036513 STAS domain superfamily TVD_01950 dbc08b4ba50c63b650518a0b3e7847ce 105 Pfam PF13466 STAS domain 13 92 2.0E-15 T 11-10-2018 IPR002645 STAS domain TVD_08915 93120856bc7e2f9e6f0e80e53f23fe34 518 Pfam PF12792 CSS motif domain associated with EAL 41 169 2.5E-15 T 11-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain TVD_08915 93120856bc7e2f9e6f0e80e53f23fe34 518 SUPERFAMILY SSF141868 272 517 2.22E-74 T 11-10-2018 IPR035919 EAL domain superfamily TVD_08915 93120856bc7e2f9e6f0e80e53f23fe34 518 SMART SM00052 266 510 1.6E-88 T 11-10-2018 IPR001633 EAL domain TVD_08915 93120856bc7e2f9e6f0e80e53f23fe34 518 Gene3D G3DSA:3.20.20.450 267 518 1.0E-82 T 11-10-2018 IPR035919 EAL domain superfamily TVD_08915 93120856bc7e2f9e6f0e80e53f23fe34 518 Pfam PF00563 EAL domain 272 505 4.7E-66 T 11-10-2018 IPR001633 EAL domain TVD_09260 568ac0676186ab8de6913b7d76c61086 296 SUPERFAMILY SSF103481 197 294 1.57E-10 T 11-10-2018 TVD_09260 568ac0676186ab8de6913b7d76c61086 296 Pfam PF00892 EamA-like transporter family 3 131 6.3E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TVD_09260 568ac0676186ab8de6913b7d76c61086 296 Pfam PF00892 EamA-like transporter family 165 291 1.2E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TVD_09260 568ac0676186ab8de6913b7d76c61086 296 SUPERFAMILY SSF103481 37 135 8.5E-9 T 11-10-2018 TVD_12595 305a9dded1bdfb903fddb1da2126db8c 470 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 12 469 1.3E-145 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TVD_12595 305a9dded1bdfb903fddb1da2126db8c 470 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TVD_12595 305a9dded1bdfb903fddb1da2126db8c 470 SUPERFAMILY SSF51735 231 390 2.94E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_12595 305a9dded1bdfb903fddb1da2126db8c 470 SUPERFAMILY SSF52283 10 470 1.25E-113 T 11-10-2018 TVD_12595 305a9dded1bdfb903fddb1da2126db8c 470 Gene3D G3DSA:3.40.50.1480 13 470 1.1E-235 T 11-10-2018 TVD_12595 305a9dded1bdfb903fddb1da2126db8c 470 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 8 462 48.052 T 11-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 TVD_12595 305a9dded1bdfb903fddb1da2126db8c 470 PIRSF PIRSF001109 1 470 1.1E-192 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TVD_12595 305a9dded1bdfb903fddb1da2126db8c 470 SMART SM00997 231 390 8.7E-112 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TVD_12595 305a9dded1bdfb903fddb1da2126db8c 470 Gene3D G3DSA:3.40.50.720 233 390 1.1E-235 T 11-10-2018 TVD_12595 305a9dded1bdfb903fddb1da2126db8c 470 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 253 269 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TVD_12595 305a9dded1bdfb903fddb1da2126db8c 470 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 231 390 8.4E-81 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TVD_12595 305a9dded1bdfb903fddb1da2126db8c 470 SMART SM00996 12 469 0.0 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TVD_12595 305a9dded1bdfb903fddb1da2126db8c 470 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 462 9.2E-187 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 TVD_00640 03facf0abc9ba712f38b4b2322906a46 173 Pfam PF01584 CheW-like domain 19 156 7.8E-32 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_00640 03facf0abc9ba712f38b4b2322906a46 173 SUPERFAMILY SSF50341 9 157 8.76E-38 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TVD_00640 03facf0abc9ba712f38b4b2322906a46 173 Gene3D G3DSA:2.40.50.180 38 151 1.5E-38 T 11-10-2018 TVD_00640 03facf0abc9ba712f38b4b2322906a46 173 SMART SM00260 15 156 1.4E-36 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_00640 03facf0abc9ba712f38b4b2322906a46 173 Gene3D G3DSA:2.30.30.40 21 150 1.5E-38 T 11-10-2018 TVD_00805 d4fb1affd9115783c2beb775926ba53d 276 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 8 276 63.056 T 11-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein TVD_00805 d4fb1affd9115783c2beb775926ba53d 276 Pfam PF03618 Kinase/pyrophosphorylase 11 266 8.4E-69 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 TVD_06735 592f06e1548e814947fcb76609e2a0c0 296 Pfam PF00698 Acyl transferase domain 13 265 7.7E-27 T 11-10-2018 IPR014043 Acyl transferase TVD_06735 592f06e1548e814947fcb76609e2a0c0 296 Gene3D G3DSA:3.40.366.10 1 269 4.6E-90 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 TVD_06735 592f06e1548e814947fcb76609e2a0c0 296 Gene3D G3DSA:3.30.70.250 108 180 4.6E-90 T 11-10-2018 TVD_06735 592f06e1548e814947fcb76609e2a0c0 296 PIRSF PIRSF000446 1 294 5.2E-100 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 TVD_06735 592f06e1548e814947fcb76609e2a0c0 296 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 274 2.6E-95 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 TVD_06735 592f06e1548e814947fcb76609e2a0c0 296 SUPERFAMILY SSF55048 111 180 1.12E-15 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding TVD_06735 592f06e1548e814947fcb76609e2a0c0 296 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1 285 5.6E-28 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain TVD_06735 592f06e1548e814947fcb76609e2a0c0 296 SUPERFAMILY SSF52151 1 293 4.45E-68 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TVD_04325 e44febe0818cab0bf504d21918a849e5 150 SUPERFAMILY SSF109635 13 109 1.31E-34 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily TVD_04325 e44febe0818cab0bf504d21918a849e5 150 SUPERFAMILY SSF57716 111 148 5.7E-10 T 11-10-2018 TVD_04325 e44febe0818cab0bf504d21918a849e5 150 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 4.2E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria TVD_04325 e44febe0818cab0bf504d21918a849e5 150 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 4.2E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria TVD_04325 e44febe0818cab0bf504d21918a849e5 150 Gene3D G3DSA:1.20.120.910 22 150 1.9E-39 T 11-10-2018 TVD_04325 e44febe0818cab0bf504d21918a849e5 150 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site TVD_04325 e44febe0818cab0bf504d21918a849e5 150 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 28.612 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 TVD_04325 e44febe0818cab0bf504d21918a849e5 150 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 9.2E-50 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 TVD_04325 e44febe0818cab0bf504d21918a849e5 150 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 110 140 1.3E-11 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 TVD_12215 3521fc1183b830f38097e93870007a54 368 Pfam PF13439 Glycosyltransferase Family 4 14 167 6.4E-23 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TVD_12215 3521fc1183b830f38097e93870007a54 368 Gene3D G3DSA:3.40.50.2000 186 346 1.1E-23 T 11-10-2018 TVD_12215 3521fc1183b830f38097e93870007a54 368 SUPERFAMILY SSF53756 4 368 2.41E-55 T 11-10-2018 TVD_12215 3521fc1183b830f38097e93870007a54 368 Pfam PF00534 Glycosyl transferases group 1 192 341 2.7E-21 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TVD_12215 3521fc1183b830f38097e93870007a54 368 Gene3D G3DSA:3.40.50.2000 4 175 1.8E-22 T 11-10-2018 TVD_06515 2e826f35265ffaa254d0a774606dd160 235 SUPERFAMILY SSF52540 7 225 2.03E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06515 2e826f35265ffaa254d0a774606dd160 235 Hamap MF_00238 Cytidylate kinase [cmk]. 6 226 32.43 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TVD_06515 2e826f35265ffaa254d0a774606dd160 235 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 221 1.9E-73 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TVD_06515 2e826f35265ffaa254d0a774606dd160 235 Pfam PF02224 Cytidylate kinase 9 222 8.8E-71 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 TVD_06515 2e826f35265ffaa254d0a774606dd160 235 Gene3D G3DSA:3.40.50.300 1 228 4.3E-76 T 11-10-2018 TVD_00965 206fe045a58a5b539911cadbcc1387fe 312 Gene3D G3DSA:3.40.190.10 92 294 9.4E-80 T 11-10-2018 TVD_00965 206fe045a58a5b539911cadbcc1387fe 312 SUPERFAMILY SSF53850 87 298 8.84E-44 T 11-10-2018 TVD_00965 206fe045a58a5b539911cadbcc1387fe 312 SUPERFAMILY SSF46785 3 110 6.93E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_00965 206fe045a58a5b539911cadbcc1387fe 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_00965 206fe045a58a5b539911cadbcc1387fe 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_00965 206fe045a58a5b539911cadbcc1387fe 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_00965 206fe045a58a5b539911cadbcc1387fe 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.9E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_00965 206fe045a58a5b539911cadbcc1387fe 312 Gene3D G3DSA:1.10.10.10 1 84 3.7E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_00965 206fe045a58a5b539911cadbcc1387fe 312 Pfam PF03466 LysR substrate binding domain 87 297 7.3E-50 T 11-10-2018 IPR005119 LysR, substrate-binding TVD_00965 206fe045a58a5b539911cadbcc1387fe 312 Gene3D G3DSA:3.40.190.10 161 271 9.4E-80 T 11-10-2018 TVD_03935 7aabe630583321fefdff20f80c93b507 368 SMART SM00671 225 260 1.2E-6 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 SMART SM00671 261 296 2.3E-8 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 SMART SM00671 84 117 1.4E-5 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 SMART SM00671 118 152 0.72 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 SMART SM00671 297 332 5.1E-8 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 SMART SM00671 48 83 5.3E-6 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 SMART SM00671 153 188 5.0E-7 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 SMART SM00671 189 224 2.3E-7 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 Gene3D G3DSA:1.25.40.10 137 359 1.4E-64 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_03935 7aabe630583321fefdff20f80c93b507 368 Pfam PF08238 Sel1 repeat 84 117 1.2E-4 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 Pfam PF08238 Sel1 repeat 190 224 3.1E-8 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 Pfam PF08238 Sel1 repeat 119 152 0.021 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 Pfam PF08238 Sel1 repeat 261 295 6.9E-8 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 Pfam PF08238 Sel1 repeat 153 188 1.9E-5 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 Pfam PF08238 Sel1 repeat 50 82 6.4E-7 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 Pfam PF08238 Sel1 repeat 297 332 2.7E-7 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 Pfam PF08238 Sel1 repeat 225 260 5.1E-5 T 11-10-2018 IPR006597 Sel1-like repeat TVD_03935 7aabe630583321fefdff20f80c93b507 368 Gene3D G3DSA:1.25.40.10 22 136 6.6E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_03935 7aabe630583321fefdff20f80c93b507 368 SUPERFAMILY SSF81901 23 133 1.31E-22 T 11-10-2018 TVD_03935 7aabe630583321fefdff20f80c93b507 368 SUPERFAMILY SSF81901 139 336 2.62E-48 T 11-10-2018 TVD_13460 7a053beb344b120a8c59b97360d49ab6 487 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 1.8E-177 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 TVD_13460 7a053beb344b120a8c59b97360d49ab6 487 Gene3D G3DSA:3.40.1670.10 337 454 3.8E-52 T 11-10-2018 TVD_13460 7a053beb344b120a8c59b97360d49ab6 487 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 72.468 T 11-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 TVD_13460 7a053beb344b120a8c59b97360d49ab6 487 SUPERFAMILY SSF50475 3 322 6.67E-130 T 11-10-2018 TVD_13460 7a053beb344b120a8c59b97360d49ab6 487 SUPERFAMILY SSF143968 323 486 1.03E-68 T 11-10-2018 TVD_13460 7a053beb344b120a8c59b97360d49ab6 487 Gene3D G3DSA:1.20.5.570 455 487 1.4E-16 T 11-10-2018 TVD_13460 7a053beb344b120a8c59b97360d49ab6 487 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 1.2E-177 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 TVD_02115 89befa24a580cc0df9b5d5fb519467c3 459 SUPERFAMILY SSF55103 190 454 7.03E-67 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 TVD_02115 89befa24a580cc0df9b5d5fb519467c3 459 Gene3D G3DSA:3.30.70.2740 334 415 3.9E-17 T 11-10-2018 TVD_02115 89befa24a580cc0df9b5d5fb519467c3 459 Pfam PF01565 FAD binding domain 38 176 3.1E-33 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TVD_02115 89befa24a580cc0df9b5d5fb519467c3 459 Pfam PF02913 FAD linked oxidases, C-terminal domain 213 454 4.4E-66 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 TVD_02115 89befa24a580cc0df9b5d5fb519467c3 459 SUPERFAMILY SSF56176 3 214 2.34E-61 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TVD_02115 89befa24a580cc0df9b5d5fb519467c3 459 Gene3D G3DSA:3.30.465.10 92 213 4.5E-38 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TVD_02115 89befa24a580cc0df9b5d5fb519467c3 459 Gene3D G3DSA:3.30.70.2190 214 330 1.8E-6 T 11-10-2018 TVD_02115 89befa24a580cc0df9b5d5fb519467c3 459 Gene3D G3DSA:3.30.43.10 2 89 2.7E-17 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 TVD_02115 89befa24a580cc0df9b5d5fb519467c3 459 Gene3D G3DSA:1.10.45.10 416 455 2.9E-13 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 Pfam PF02310 B12 binding domain 746 836 1.6E-18 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 Gene3D G3DSA:3.40.50.280 742 893 6.9E-55 T 11-10-2018 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 Pfam PF00809 Pterin binding enzyme 360 598 1.5E-57 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 SUPERFAMILY SSF51717 356 630 8.77E-89 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 SUPERFAMILY SSF47644 650 737 1.83E-28 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 Gene3D G3DSA:1.10.288.10 954 1112 2.4E-137 T 11-10-2018 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 SUPERFAMILY SSF52242 741 892 5.63E-45 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 PIRSF PIRSF000381 1 1215 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 Gene3D G3DSA:1.10.1240.10 647 735 2.8E-40 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 Gene3D G3DSA:3.20.20.20 340 643 3.5E-130 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 TIGRFAM TIGR02082 metH: methionine synthase 12 1211 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 SUPERFAMILY SSF56507 901 1245 1.15E-122 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 Gene3D G3DSA:3.20.20.330 1 339 4.3E-131 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 SUPERFAMILY SSF82282 7 399 1.15E-118 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 Gene3D G3DSA:3.10.196.10 906 1243 2.4E-137 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 Pfam PF02574 Homocysteine S-methyltransferase 17 325 4.7E-82 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 955 1228 3.2E-125 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 Pfam PF02607 B12 binding domain 659 730 1.8E-24 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_00890 6125e5155a79f3602fa4558962f774de 1263 SMART SM01018 655 738 1.4E-44 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 SUPERFAMILY SSF81665 199 518 1.96E-11 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 Pfam PF00122 E1-E2 ATPase 306 503 2.8E-54 T 11-10-2018 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 243 826 1.5E-187 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 Gene3D G3DSA:3.40.1110.10 535 655 3.7E-95 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 Pfam PF00403 Heavy-metal-associated domain 94 152 3.1E-9 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 Pfam PF00403 Heavy-metal-associated domain 15 76 1.1E-10 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 SUPERFAMILY SSF81653 307 403 1.57E-27 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 SUPERFAMILY SSF56784 522 823 1.01E-62 T 11-10-2018 IPR036412 HAD-like superfamily TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 Gene3D G3DSA:3.40.50.1000 505 776 3.7E-95 T 11-10-2018 IPR023214 HAD superfamily TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 Pfam PF00702 haloacid dehalogenase-like hydrolase 520 738 7.4E-47 T 11-10-2018 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 PRINTS PR00941 Cadmium-transporting ATPase signature 308 324 3.7E-6 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 PRINTS PR00941 Cadmium-transporting ATPase signature 103 124 3.7E-6 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 PRINTS PR00941 Cadmium-transporting ATPase signature 369 385 3.7E-6 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 PRINTS PR00941 Cadmium-transporting ATPase signature 388 402 3.7E-6 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 SUPERFAMILY SSF55008 89 159 1.96E-13 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 Gene3D G3DSA:3.30.70.100 6 79 1.0E-14 T 11-10-2018 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 724 743 3.2E-27 T 11-10-2018 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 524 538 3.2E-27 T 11-10-2018 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 670 680 3.2E-27 T 11-10-2018 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 747 759 3.2E-27 T 11-10-2018 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 3.2E-27 T 11-10-2018 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 648 659 3.2E-27 T 11-10-2018 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 Gene3D G3DSA:2.70.150.20 296 408 5.5E-41 T 11-10-2018 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 526 532 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 276 442 1.1E-22 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 469 804 6.0E-62 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 SUPERFAMILY SSF55008 12 80 1.31E-15 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TVD_10825 e93118c6050f56d5a80c887dc7848b64 839 Gene3D G3DSA:3.30.70.100 89 153 3.1E-12 T 11-10-2018 TVD_07670 46de1ab5a0c2b42125f3261a4aa1bbe7 653 Gene3D G3DSA:3.30.450.20 64 203 6.2E-40 T 11-10-2018 TVD_07670 46de1ab5a0c2b42125f3261a4aa1bbe7 653 Gene3D G3DSA:1.20.1480.50 306 394 1.8E-21 T 11-10-2018 TVD_07670 46de1ab5a0c2b42125f3261a4aa1bbe7 653 Pfam PF02743 Cache domain 39 249 1.4E-12 T 11-10-2018 IPR033479 Double Cache domain 1 TVD_07670 46de1ab5a0c2b42125f3261a4aa1bbe7 653 Gene3D G3DSA:3.60.40.10 395 644 6.0E-72 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_07670 46de1ab5a0c2b42125f3261a4aa1bbe7 653 SMART SM00304 337 390 3.8E-15 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_07670 46de1ab5a0c2b42125f3261a4aa1bbe7 653 SMART SM00331 425 645 1.5E-51 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_07670 46de1ab5a0c2b42125f3261a4aa1bbe7 653 SUPERFAMILY SSF158472 337 389 2.09E-13 T 11-10-2018 TVD_07670 46de1ab5a0c2b42125f3261a4aa1bbe7 653 Gene3D G3DSA:3.30.450.20 54 305 6.2E-40 T 11-10-2018 TVD_07670 46de1ab5a0c2b42125f3261a4aa1bbe7 653 Pfam PF00672 HAMP domain 337 386 1.7E-14 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_07670 46de1ab5a0c2b42125f3261a4aa1bbe7 653 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 455 645 1.8E-53 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_07670 46de1ab5a0c2b42125f3261a4aa1bbe7 653 SUPERFAMILY SSF81606 439 644 4.45E-8 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_13490 9b57c3ddabeba86abe3e471fbf1fb6e4 367 SMART SM00480 17 363 2.3E-88 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TVD_13490 9b57c3ddabeba86abe3e471fbf1fb6e4 367 Gene3D G3DSA:3.70.10.10 138 365 6.2E-100 T 11-10-2018 TVD_13490 9b57c3ddabeba86abe3e471fbf1fb6e4 367 SUPERFAMILY SSF55979 1 119 4.49E-17 T 11-10-2018 TVD_13490 9b57c3ddabeba86abe3e471fbf1fb6e4 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 367 6.4E-88 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TVD_13490 9b57c3ddabeba86abe3e471fbf1fb6e4 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 366 4.3E-32 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 TVD_13490 9b57c3ddabeba86abe3e471fbf1fb6e4 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 244 2.6E-31 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 TVD_13490 9b57c3ddabeba86abe3e471fbf1fb6e4 367 SUPERFAMILY SSF55979 128 245 5.42E-26 T 11-10-2018 TVD_13490 9b57c3ddabeba86abe3e471fbf1fb6e4 367 PIRSF PIRSF000804 1 367 1.9E-99 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 TVD_13490 9b57c3ddabeba86abe3e471fbf1fb6e4 367 SUPERFAMILY SSF55979 246 367 1.62E-34 T 11-10-2018 TVD_13490 9b57c3ddabeba86abe3e471fbf1fb6e4 367 Gene3D G3DSA:3.10.150.10 1 243 6.2E-100 T 11-10-2018 TVD_13490 9b57c3ddabeba86abe3e471fbf1fb6e4 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 1.2E-16 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 TVD_11235 be85148ecd0a1b1057da9dafa10d3dca 424 Gene3D G3DSA:3.90.226.10 191 363 1.6E-95 T 11-10-2018 TVD_11235 be85148ecd0a1b1057da9dafa10d3dca 424 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 56 371 5.2E-103 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 TVD_11235 be85148ecd0a1b1057da9dafa10d3dca 424 SUPERFAMILY SSF50156 91 186 1.96E-20 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TVD_11235 be85148ecd0a1b1057da9dafa10d3dca 424 Pfam PF13180 PDZ domain 103 182 1.9E-11 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_11235 be85148ecd0a1b1057da9dafa10d3dca 424 SUPERFAMILY SSF52096 37 370 5.96E-82 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TVD_11235 be85148ecd0a1b1057da9dafa10d3dca 424 Gene3D G3DSA:2.30.42.10 103 190 1.6E-95 T 11-10-2018 TVD_11235 be85148ecd0a1b1057da9dafa10d3dca 424 SMART SM00228 103 174 2.3E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_11235 be85148ecd0a1b1057da9dafa10d3dca 424 Pfam PF03572 Peptidase family S41 202 364 2.1E-55 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TVD_11235 be85148ecd0a1b1057da9dafa10d3dca 424 SMART SM00245 176 366 1.5E-69 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 TVD_11235 be85148ecd0a1b1057da9dafa10d3dca 424 Gene3D G3DSA:3.30.750.44 51 341 1.6E-95 T 11-10-2018 TVD_01900 0b3f42cc4bb840ea268413cb2b4c3693 179 PIRSF PIRSF006118 3 177 2.3E-65 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TVD_01900 0b3f42cc4bb840ea268413cb2b4c3693 179 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 15 166 4.6E-51 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TVD_01900 0b3f42cc4bb840ea268413cb2b4c3693 179 Pfam PF08282 haloacid dehalogenase-like hydrolase 89 149 3.0E-11 T 11-10-2018 TVD_01900 0b3f42cc4bb840ea268413cb2b4c3693 179 Gene3D G3DSA:3.40.50.1000 9 177 4.0E-53 T 11-10-2018 IPR023214 HAD superfamily TVD_01900 0b3f42cc4bb840ea268413cb2b4c3693 179 SUPERFAMILY SSF56784 15 172 7.0E-42 T 11-10-2018 IPR036412 HAD-like superfamily TVD_01255 e29bc41557059527b786aa54c5aa086c 201 Gene3D G3DSA:3.90.870.10 5 190 3.6E-52 T 11-10-2018 TVD_01255 e29bc41557059527b786aa54c5aa086c 201 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 10 190 35.204 T 11-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 TVD_01255 e29bc41557059527b786aa54c5aa086c 201 SUPERFAMILY SSF55821 12 189 1.46E-45 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TVD_01255 e29bc41557059527b786aa54c5aa086c 201 Pfam PF01300 Telomere recombination 20 185 5.8E-38 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 TVD_02700 85de3b83fdb7ce968cb61b596f8339ac 378 SUPERFAMILY SSF110738 1 368 9.02E-108 T 11-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 TVD_02700 85de3b83fdb7ce968cb61b596f8339ac 378 Gene3D G3DSA:3.40.50.10350 1 360 1.6E-122 T 11-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold TVD_02700 85de3b83fdb7ce968cb61b596f8339ac 378 Pfam PF02595 Glycerate kinase family 1 370 3.5E-126 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 TVD_02700 85de3b83fdb7ce968cb61b596f8339ac 378 PIRSF PIRSF006078 1 373 6.9E-119 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 TVD_02700 85de3b83fdb7ce968cb61b596f8339ac 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 1 368 3.5E-113 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 TVD_02700 85de3b83fdb7ce968cb61b596f8339ac 378 Gene3D G3DSA:3.90.1510.10 40 275 1.6E-122 T 11-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 TVD_09845 b9af779a7651c903eda8f32cb7ea25ec 402 Gene3D G3DSA:2.40.420.20 308 366 2.2E-36 T 11-10-2018 TVD_09845 b9af779a7651c903eda8f32cb7ea25ec 402 SUPERFAMILY SSF111369 46 127 4.18E-8 T 11-10-2018 TVD_09845 b9af779a7651c903eda8f32cb7ea25ec 402 Gene3D G3DSA:1.10.287.470 173 196 2.2E-36 T 11-10-2018 TVD_09845 b9af779a7651c903eda8f32cb7ea25ec 402 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 195 289 2.6E-12 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TVD_09845 b9af779a7651c903eda8f32cb7ea25ec 402 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 167 380 5.0E-37 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TVD_09845 b9af779a7651c903eda8f32cb7ea25ec 402 Gene3D G3DSA:1.10.287.470 91 121 5.9E-10 T 11-10-2018 TVD_09845 b9af779a7651c903eda8f32cb7ea25ec 402 Gene3D G3DSA:2.40.50.100 56 90 5.9E-10 T 11-10-2018 TVD_09845 b9af779a7651c903eda8f32cb7ea25ec 402 Gene3D G3DSA:2.40.30.170 230 307 2.2E-36 T 11-10-2018 TVD_09845 b9af779a7651c903eda8f32cb7ea25ec 402 Gene3D G3DSA:2.40.50.100 197 229 2.2E-36 T 11-10-2018 TVD_09845 b9af779a7651c903eda8f32cb7ea25ec 402 SUPERFAMILY SSF111369 172 307 1.44E-7 T 11-10-2018 TVD_12730 dccfcb9c2d21c2b3eba81864ce3cca3a 685 Gene3D G3DSA:1.10.530.10 477 640 1.1E-44 T 11-10-2018 TVD_12730 dccfcb9c2d21c2b3eba81864ce3cca3a 685 Pfam PF14718 Soluble lytic murein transglycosylase L domain 412 476 4.2E-20 T 11-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 TVD_12730 dccfcb9c2d21c2b3eba81864ce3cca3a 685 SUPERFAMILY SSF48435 35 481 5.75E-119 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 TVD_12730 dccfcb9c2d21c2b3eba81864ce3cca3a 685 Pfam PF01464 Transglycosylase SLT domain 489 600 9.0E-25 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 TVD_12730 dccfcb9c2d21c2b3eba81864ce3cca3a 685 SUPERFAMILY SSF53955 483 645 5.25E-44 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TVD_12730 dccfcb9c2d21c2b3eba81864ce3cca3a 685 Gene3D G3DSA:1.25.20.10 34 391 4.0E-105 T 11-10-2018 TVD_12730 dccfcb9c2d21c2b3eba81864ce3cca3a 685 Gene3D G3DSA:1.10.1240.20 408 476 1.8E-6 T 11-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 SUPERFAMILY SSF52540 143 380 7.19E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 Gene3D G3DSA:3.40.50.300 125 307 2.2E-52 T 11-10-2018 TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 Pfam PF02954 Bacterial regulatory protein, Fis family 408 447 8.5E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 PRINTS PR00819 CbxX/CfqX superfamily signature 353 365 2.5E-9 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 PRINTS PR00819 CbxX/CfqX superfamily signature 165 180 2.5E-9 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 PRINTS PR00819 CbxX/CfqX superfamily signature 220 239 2.5E-9 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 PRINTS PR00819 CbxX/CfqX superfamily signature 125 139 2.5E-9 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 SUPERFAMILY SSF52172 2 186 1.57E-43 T 11-10-2018 IPR011006 CheY-like superfamily TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 Gene3D G3DSA:3.40.50.2300 5 124 5.1E-35 T 11-10-2018 TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 Gene3D G3DSA:1.10.10.60 399 454 1.0E-16 T 11-10-2018 TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 414 431 2.1E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 431 451 2.1E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 SUPERFAMILY SSF46689 350 451 2.42E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 Pfam PF00072 Response regulator receiver domain 6 114 2.9E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 Pfam PF00158 Sigma-54 interaction domain 144 303 9.1E-48 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 SMART SM00382 162 301 5.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 SMART SM00448 4 116 1.8E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_01305 3dec5e7723bad6d0ddeb22d808122b13 459 Gene3D G3DSA:1.10.8.60 308 387 2.0E-22 T 11-10-2018 TVD_06995 9eb10d20ad17b3aeff78abcb545731d9 730 SUPERFAMILY SSF81301 190 399 6.87E-59 T 11-10-2018 TVD_06995 9eb10d20ad17b3aeff78abcb545731d9 730 SUPERFAMILY SSF109604 38 200 1.26E-36 T 11-10-2018 TVD_06995 9eb10d20ad17b3aeff78abcb545731d9 730 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 56 724 3.7E-174 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 TVD_06995 9eb10d20ad17b3aeff78abcb545731d9 730 Pfam PF04607 Region found in RelA / SpoT proteins 245 354 6.1E-38 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 TVD_06995 9eb10d20ad17b3aeff78abcb545731d9 730 Pfam PF13291 ACT domain 653 725 4.1E-14 T 11-10-2018 IPR002912 ACT domain TVD_06995 9eb10d20ad17b3aeff78abcb545731d9 730 SUPERFAMILY SSF81271 392 454 1.53E-18 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TVD_06995 9eb10d20ad17b3aeff78abcb545731d9 730 Pfam PF13328 HD domain 42 185 9.0E-33 T 11-10-2018 IPR003607 HD/PDEase domain TVD_06995 9eb10d20ad17b3aeff78abcb545731d9 730 Gene3D G3DSA:3.30.460.10 203 335 9.0E-49 T 11-10-2018 TVD_06995 9eb10d20ad17b3aeff78abcb545731d9 730 SUPERFAMILY SSF55021 651 726 8.1E-12 T 11-10-2018 TVD_06995 9eb10d20ad17b3aeff78abcb545731d9 730 SMART SM00954 245 355 9.3E-65 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 TVD_06995 9eb10d20ad17b3aeff78abcb545731d9 730 Gene3D G3DSA:1.10.3210.10 36 201 5.9E-38 T 11-10-2018 TVD_06995 9eb10d20ad17b3aeff78abcb545731d9 730 Gene3D G3DSA:3.10.20.30 389 459 4.1E-29 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TVD_06995 9eb10d20ad17b3aeff78abcb545731d9 730 Gene3D G3DSA:3.30.70.260 651 727 7.2E-14 T 11-10-2018 TVD_06995 9eb10d20ad17b3aeff78abcb545731d9 730 Pfam PF02824 TGS domain 395 454 1.2E-19 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 TVD_13220 21133d7cc145919b9b56c59cebe16430 323 Pfam PF09828 Chromate resistance exported protein 185 312 1.9E-41 T 11-10-2018 IPR018634 Chromate resistance exported protein TVD_08550 8b7aa818844750bebfabb497be9bffd2 173 Pfam PF02620 Uncharacterized ACR, COG1399 60 164 4.2E-14 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD TVD_04660 c55b0125f080fd0951fd92b0aac794bd 412 Pfam PF02353 Mycolic acid cyclopropane synthetase 109 366 8.1E-91 T 11-10-2018 TVD_04660 c55b0125f080fd0951fd92b0aac794bd 412 SUPERFAMILY SSF53335 116 376 1.48E-78 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_04660 c55b0125f080fd0951fd92b0aac794bd 412 PIRSF PIRSF003085 1 394 1.3E-127 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 TVD_04660 c55b0125f080fd0951fd92b0aac794bd 412 Gene3D G3DSA:3.40.50.150 114 380 2.2E-95 T 11-10-2018 TVD_08615 675425d6cb395218f6e595c81ef19b6f 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 126 5.6E-21 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 TVD_08615 675425d6cb395218f6e595c81ef19b6f 136 PIRSF PIRSF006092 31 128 1.1E-24 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 TVD_08615 675425d6cb395218f6e595c81ef19b6f 136 Gene3D G3DSA:1.10.286.20 1 44 1.3E-18 T 11-10-2018 TVD_08615 675425d6cb395218f6e595c81ef19b6f 136 Gene3D G3DSA:3.10.50.30 45 136 5.9E-32 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 TVD_08615 675425d6cb395218f6e595c81ef19b6f 136 Pfam PF14760 Rnk N-terminus 4 44 9.1E-16 T 11-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain TVD_08615 675425d6cb395218f6e595c81ef19b6f 136 SUPERFAMILY SSF54534 49 127 1.44E-19 T 11-10-2018 TVD_13370 babdd5eb9c521a4c41ada95ea71911d5 442 Gene3D G3DSA:2.40.160.10 38 437 4.0E-12 T 11-10-2018 IPR023614 Porin domain superfamily TVD_13370 babdd5eb9c521a4c41ada95ea71911d5 442 SUPERFAMILY SSF56935 45 419 9.16E-15 T 11-10-2018 TVD_13370 babdd5eb9c521a4c41ada95ea71911d5 442 Pfam PF13609 Gram-negative porin 75 408 2.1E-9 T 11-10-2018 TVD_05830 0eae3b495db66c1e20bb54696341a849 361 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 345 57.948 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 TVD_05830 0eae3b495db66c1e20bb54696341a849 361 Gene3D G3DSA:3.90.25.10 193 340 1.2E-171 T 11-10-2018 TVD_05830 0eae3b495db66c1e20bb54696341a849 361 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 335 1.3E-163 T 11-10-2018 IPR016040 NAD(P)-binding domain TVD_05830 0eae3b495db66c1e20bb54696341a849 361 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 342 2.2E-183 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 TVD_05830 0eae3b495db66c1e20bb54696341a849 361 Gene3D G3DSA:3.40.50.720 5 326 1.2E-171 T 11-10-2018 TVD_05830 0eae3b495db66c1e20bb54696341a849 361 SUPERFAMILY SSF51735 3 340 2.86E-87 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_05780 b7921145b6b4870498644ac8861b2baf 140 Gene3D G3DSA:3.30.428.10 3 135 2.1E-35 T 11-10-2018 IPR036265 HIT-like superfamily TVD_05780 b7921145b6b4870498644ac8861b2baf 140 SUPERFAMILY SSF54197 11 131 4.68E-28 T 11-10-2018 IPR036265 HIT-like superfamily TVD_05780 b7921145b6b4870498644ac8861b2baf 140 PIRSF PIRSF000714 4 135 2.1E-43 T 11-10-2018 IPR026026 Histidine triad hydrolase, Hint-type TVD_05780 b7921145b6b4870498644ac8861b2baf 140 Pfam PF01230 HIT domain 11 101 3.8E-13 T 11-10-2018 IPR001310 Histidine triad (HIT) protein TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 Pfam PF00175 Oxidoreductase NAD-binding domain 209 317 2.0E-15 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 SUPERFAMILY SSF54292 1 89 5.11E-28 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 SUPERFAMILY SSF63380 102 198 3.23E-26 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 Gene3D G3DSA:3.10.20.30 1 99 2.6E-26 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 Gene3D G3DSA:2.40.30.10 101 199 2.8E-27 T 11-10-2018 TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 Pfam PF00970 Oxidoreductase FAD-binding domain 105 197 3.3E-17 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 SUPERFAMILY SSF52343 201 337 1.44E-33 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 81 2.3E-15 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 Gene3D G3DSA:3.40.50.80 201 336 3.3E-26 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 3.2E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 148 155 3.2E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 303 311 3.2E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 3.2E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 233 242 3.2E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 TVD_13445 a13d5c490eb184ca8f070fc866ff4409 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 3.2E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 TVD_07075 e2e6ba4e5f17d6a7af4c4ec4a79b2f97 353 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 16 348 3.2E-132 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TVD_07075 e2e6ba4e5f17d6a7af4c4ec4a79b2f97 353 SUPERFAMILY SSF52733 7 349 5.23E-117 T 11-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TVD_07075 e2e6ba4e5f17d6a7af4c4ec4a79b2f97 353 Gene3D G3DSA:1.10.1610.10 26 348 1.2E-126 T 11-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TVD_07075 e2e6ba4e5f17d6a7af4c4ec4a79b2f97 353 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 14 350 36.321 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TVD_07075 e2e6ba4e5f17d6a7af4c4ec4a79b2f97 353 Pfam PF02277 Phosphoribosyltransferase 14 348 6.8E-131 T 11-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 TVD_07075 e2e6ba4e5f17d6a7af4c4ec4a79b2f97 353 Gene3D G3DSA:3.40.50.10210 58 331 1.2E-126 T 11-10-2018 TVD_00415 dd89efb1e61c96469046f0f20a0010f0 535 SUPERFAMILY SSF56801 12 531 6.67E-124 T 11-10-2018 TVD_00415 dd89efb1e61c96469046f0f20a0010f0 535 Gene3D G3DSA:3.30.300.30 433 533 3.3E-28 T 11-10-2018 TVD_00415 dd89efb1e61c96469046f0f20a0010f0 535 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 35 461 1.2E-96 T 11-10-2018 IPR010071 Amino acid adenylation domain TVD_00415 dd89efb1e61c96469046f0f20a0010f0 535 Pfam PF00501 AMP-binding enzyme 15 437 6.3E-76 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TVD_00415 dd89efb1e61c96469046f0f20a0010f0 535 Gene3D G3DSA:3.40.50.12780 11 432 2.9E-102 T 11-10-2018 TVD_00415 dd89efb1e61c96469046f0f20a0010f0 535 ProSitePatterns PS00455 Putative AMP-binding domain signature. 176 187 - T 11-10-2018 IPR020845 AMP-binding, conserved site TVD_00415 dd89efb1e61c96469046f0f20a0010f0 535 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 519 4.9E-12 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TVD_04810 fde1a72192f1643a5db0afbb059c0fb2 1296 Pfam PF03704 Bacterial transcriptional activator domain 125 270 1.3E-10 T 11-10-2018 IPR005158 Bacterial transcriptional activator domain TVD_04810 fde1a72192f1643a5db0afbb059c0fb2 1296 SUPERFAMILY SSF48452 141 278 2.41E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_04810 fde1a72192f1643a5db0afbb059c0fb2 1296 Pfam PF13191 AAA ATPase domain 469 651 1.4E-19 T 11-10-2018 TVD_04810 fde1a72192f1643a5db0afbb059c0fb2 1296 SUPERFAMILY SSF48452 1050 1146 2.28E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_04810 fde1a72192f1643a5db0afbb059c0fb2 1296 SUPERFAMILY SSF48452 864 1075 2.28E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_04810 fde1a72192f1643a5db0afbb059c0fb2 1296 Gene3D G3DSA:3.30.70.1230 298 461 1.2E-5 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_04810 fde1a72192f1643a5db0afbb059c0fb2 1296 Gene3D G3DSA:1.25.40.10 107 297 3.4E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_04810 fde1a72192f1643a5db0afbb059c0fb2 1296 Gene3D G3DSA:1.25.40.10 972 1275 5.0E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_04810 fde1a72192f1643a5db0afbb059c0fb2 1296 SMART SM01043 124 270 8.4E-6 T 11-10-2018 IPR005158 Bacterial transcriptional activator domain TVD_04810 fde1a72192f1643a5db0afbb059c0fb2 1296 SMART SM00028 1000 1033 2.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_04810 fde1a72192f1643a5db0afbb059c0fb2 1296 SMART SM00028 868 901 16.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_04810 fde1a72192f1643a5db0afbb059c0fb2 1296 Gene3D G3DSA:1.10.10.10 1 92 1.3E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_04810 fde1a72192f1643a5db0afbb059c0fb2 1296 SUPERFAMILY SSF55073 294 443 6.59E-8 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_04810 fde1a72192f1643a5db0afbb059c0fb2 1296 SUPERFAMILY SSF52540 467 729 5.13E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 SMART SM00316 640 723 9.9E-13 T 11-10-2018 IPR022967 RNA-binding domain, S1 TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 SMART SM00316 87 149 18.0 T 11-10-2018 IPR022967 RNA-binding domain, S1 TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 TIGRFAM TIGR02063 RNase_R: ribonuclease R 26 723 2.3E-262 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 SUPERFAMILY SSF50249 76 154 1.05E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 87 722 6.8E-228 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 Pfam PF00575 S1 RNA binding domain 639 721 3.3E-13 T 11-10-2018 IPR003029 S1 domain GO:0003676 TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 SUPERFAMILY SSF50249 642 722 1.86E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 Gene3D G3DSA:2.40.50.140 643 751 1.6E-21 T 11-10-2018 TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 Gene3D G3DSA:2.40.50.140 85 154 1.9E-19 T 11-10-2018 TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 SMART SM00955 267 594 1.3E-179 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 Hamap MF_01895 Ribonuclease R [rnr]. 45 723 56.926 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 SUPERFAMILY SSF50249 145 244 1.33E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 Pfam PF08206 Ribonuclease B OB domain 94 151 4.6E-23 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 Pfam PF00773 RNB domain 267 594 2.3E-106 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 SUPERFAMILY SSF50249 227 639 2.4E-144 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 SMART SM00357 160 221 4.0 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 SMART SM00357 93 152 9.1E-13 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 Pfam PF08461 Ribonuclease R winged-helix domain 30 81 3.1E-9 T 11-10-2018 IPR013668 Ribonuclease R winged-helix domain TVD_10875 16f8ebcb8d3fbe79b5de84d62775716f 950 ProSitePatterns PS01175 Ribonuclease II family signature. 561 585 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site TVD_09295 4667386c9727bc7fb293b9b14089941e 501 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 55 208 1.0E-14 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like TVD_00270 66d307c4c73a78fcff348483eebd65b2 751 SUPERFAMILY SSF82866 546 745 2.88E-35 T 11-10-2018 TVD_00270 66d307c4c73a78fcff348483eebd65b2 751 Gene3D G3DSA:1.20.1640.10 576 749 6.8E-18 T 11-10-2018 TVD_00270 66d307c4c73a78fcff348483eebd65b2 751 SUPERFAMILY SSF82866 173 362 4.32E-20 T 11-10-2018 TVD_00270 66d307c4c73a78fcff348483eebd65b2 751 Pfam PF03176 MMPL family 75 371 3.0E-9 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TVD_00270 66d307c4c73a78fcff348483eebd65b2 751 Pfam PF03176 MMPL family 538 745 6.2E-18 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TVD_06560 d4e7e606ce0c0a4fc9d8abc3d0933c7c 561 Gene3D G3DSA:3.50.30.80 380 529 9.1E-53 T 11-10-2018 TVD_06560 d4e7e606ce0c0a4fc9d8abc3d0933c7c 561 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 19 558 4.3E-232 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TVD_06560 d4e7e606ce0c0a4fc9d8abc3d0933c7c 561 SUPERFAMILY SSF52016 381 558 4.16E-58 T 11-10-2018 TVD_06560 d4e7e606ce0c0a4fc9d8abc3d0933c7c 561 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 6 558 45.57 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TVD_06560 d4e7e606ce0c0a4fc9d8abc3d0933c7c 561 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 466 477 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TVD_06560 d4e7e606ce0c0a4fc9d8abc3d0933c7c 561 SUPERFAMILY SSF143975 3 379 8.11E-138 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TVD_06560 d4e7e606ce0c0a4fc9d8abc3d0933c7c 561 Pfam PF00920 Dehydratase family 36 555 3.9E-211 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TVD_06560 d4e7e606ce0c0a4fc9d8abc3d0933c7c 561 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TVD_02220 2b09ddab7eda1e0e8db38fd6dfc91193 145 Pfam PF05258 Protein of unknown function (DUF721) 15 87 1.5E-7 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 TVD_12360 d5cd7989d9fa2d89a5e179168575145f 223 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 223 6.6E-68 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 TVD_12360 d5cd7989d9fa2d89a5e179168575145f 223 Gene3D G3DSA:3.40.140.10 102 223 3.8E-40 T 11-10-2018 TVD_12360 d5cd7989d9fa2d89a5e179168575145f 223 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site TVD_12360 d5cd7989d9fa2d89a5e179168575145f 223 SUPERFAMILY SSF102712 108 190 4.32E-7 T 11-10-2018 TVD_12360 d5cd7989d9fa2d89a5e179168575145f 223 Pfam PF04002 RadC-like JAB domain 104 221 1.3E-42 T 11-10-2018 IPR025657 RadC-like JAB domain TVD_12360 d5cd7989d9fa2d89a5e179168575145f 223 SUPERFAMILY SSF47781 15 90 2.45E-10 T 11-10-2018 IPR010994 RuvA domain 2-like TVD_01650 a56136d72b3948a7739c93f514e63f45 164 SUPERFAMILY SSF103054 85 161 3.27E-11 T 11-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily TVD_01650 a56136d72b3948a7739c93f514e63f45 164 Pfam PF04612 Type II secretion system (T2SS), protein M 2 161 1.3E-36 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 TVD_01650 a56136d72b3948a7739c93f514e63f45 164 Gene3D G3DSA:3.30.1360.100 84 164 7.6E-10 T 11-10-2018 TVD_01650 a56136d72b3948a7739c93f514e63f45 164 PIRSF PIRSF006291 1 164 3.2E-27 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 TVD_06470 0486d8aa19ae6c8458fe53fca088c55f 767 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 91 690 1.2E-70 T 11-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 TVD_06470 0486d8aa19ae6c8458fe53fca088c55f 767 Pfam PF00753 Metallo-beta-lactamase superfamily 506 604 1.1E-5 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_06470 0486d8aa19ae6c8458fe53fca088c55f 767 Pfam PF03772 Competence protein 204 471 2.7E-58 T 11-10-2018 IPR004477 ComEC/Rec2-related protein TVD_06470 0486d8aa19ae6c8458fe53fca088c55f 767 SUPERFAMILY SSF56281 499 725 2.8E-23 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_06470 0486d8aa19ae6c8458fe53fca088c55f 767 Pfam PF13567 Domain of unknown function (DUF4131) 5 154 3.0E-17 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 TVD_06470 0486d8aa19ae6c8458fe53fca088c55f 767 Gene3D G3DSA:3.60.15.10 498 729 1.5E-19 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_06470 0486d8aa19ae6c8458fe53fca088c55f 767 SMART SM00849 508 712 5.5E-5 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_06470 0486d8aa19ae6c8458fe53fca088c55f 767 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 226 403 3.0E-23 T 11-10-2018 IPR004477 ComEC/Rec2-related protein TVD_04170 893c4bba4d9358c9d60c97929e35f3bb 677 SUPERFAMILY SSF48208 188 538 6.8E-65 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TVD_04170 893c4bba4d9358c9d60c97929e35f3bb 677 SUPERFAMILY SSF52833 3 127 3.96E-31 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_04170 893c4bba4d9358c9d60c97929e35f3bb 677 Pfam PF03190 Protein of unknown function, DUF255 2 163 1.2E-72 T 11-10-2018 IPR004879 Domain of unknown function DUF255 TVD_04170 893c4bba4d9358c9d60c97929e35f3bb 677 Gene3D G3DSA:3.40.30.10 1 169 1.8E-65 T 11-10-2018 TVD_04170 893c4bba4d9358c9d60c97929e35f3bb 677 Gene3D G3DSA:1.50.10.10 387 570 7.0E-9 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 TVD_04170 893c4bba4d9358c9d60c97929e35f3bb 677 PIRSF PIRSF006402 1 676 5.4E-205 T 11-10-2018 IPR024705 Spermatogenesis-associated protein 20 TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 SUPERFAMILY SSF55785 349 477 4.99E-30 T 11-10-2018 IPR035965 PAS domain superfamily TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 SUPERFAMILY SSF158472 174 221 9.02E-7 T 11-10-2018 TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 SUPERFAMILY SSF55073 495 658 3.92E-49 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 Gene3D G3DSA:1.20.1480.50 137 231 7.9E-8 T 11-10-2018 TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 Gene3D G3DSA:3.30.450.20 363 487 1.9E-29 T 11-10-2018 TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 SMART SM00086 311 352 7.8 T 11-10-2018 IPR001610 PAC motif TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 SMART SM00086 437 479 2.6E-7 T 11-10-2018 IPR001610 PAC motif TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 Pfam PF00990 Diguanylate cyclase, GGDEF domain 490 652 1.9E-48 T 11-10-2018 IPR000160 GGDEF domain TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 Pfam PF00563 EAL domain 672 907 1.1E-72 T 11-10-2018 IPR001633 EAL domain TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 Gene3D G3DSA:3.30.70.270 488 668 5.0E-61 T 11-10-2018 TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 SUPERFAMILY SSF55785 226 350 1.08E-11 T 11-10-2018 IPR035965 PAS domain superfamily TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 360 485 1.8E-25 T 11-10-2018 IPR000014 PAS domain TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 Gene3D G3DSA:3.20.20.450 669 929 4.3E-100 T 11-10-2018 IPR035919 EAL domain superfamily TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 488 655 2.7E-43 T 11-10-2018 IPR000160 GGDEF domain TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 SMART SM00052 666 912 1.7E-116 T 11-10-2018 IPR001633 EAL domain TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 Pfam PF00989 PAS fold 365 476 1.1E-17 T 11-10-2018 IPR013767 PAS fold GO:0006355 TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 SMART SM00304 173 225 4.9E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 SUPERFAMILY SSF141868 671 919 2.75E-89 T 11-10-2018 IPR035919 EAL domain superfamily TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 SMART SM00091 239 307 1.6 T 11-10-2018 IPR000014 PAS domain TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 SMART SM00091 364 430 2.2E-12 T 11-10-2018 IPR000014 PAS domain TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 Pfam PF08447 PAS fold 264 340 1.9E-10 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 SMART SM00267 479 656 1.6E-63 T 11-10-2018 IPR000160 GGDEF domain TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 Pfam PF00672 HAMP domain 175 220 1.0E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_07315 520aa88e8818d207cb9801f8b0c9d5ea 930 Gene3D G3DSA:3.30.450.20 232 350 1.7E-17 T 11-10-2018 TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 7.3E-286 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 SUPERFAMILY SSF54980 302 387 6.12E-15 T 11-10-2018 IPR035647 EF-G domain III/V-like TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 138 8.9E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 Gene3D G3DSA:3.40.50.300 1 198 2.1E-66 T 11-10-2018 TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 SUPERFAMILY SSF52540 3 207 3.61E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 Pfam PF00679 Elongation factor G C-terminus 397 476 5.4E-23 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 PRINTS PR00315 GTP-binding elongation factor signature 123 132 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 PRINTS PR00315 GTP-binding elongation factor signature 87 98 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 PRINTS PR00315 GTP-binding elongation factor signature 51 59 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 PRINTS PR00315 GTP-binding elongation factor signature 71 81 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 PRINTS PR00315 GTP-binding elongation factor signature 7 20 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 Gene3D G3DSA:3.30.70.240 389 482 5.6E-133 T 11-10-2018 TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 Gene3D G3DSA:2.40.30.10 199 299 3.7E-31 T 11-10-2018 TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 SUPERFAMILY SSF50447 151 299 9.98E-32 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 Pfam PF00009 Elongation factor Tu GTP binding domain 4 194 3.8E-57 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 Gene3D G3DSA:2.40.50.250 483 599 5.6E-133 T 11-10-2018 TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 SUPERFAMILY SSF54980 398 513 4.41E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 Pfam PF03144 Elongation factor Tu domain 2 222 289 2.0E-7 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TVD_01400 e983b343db68cba4dab1f0433932c8f3 605 Gene3D G3DSA:3.30.70.870 306 590 5.6E-133 T 11-10-2018 TVD_13075 e7c45c6f78f5e30fada2e4e8e489e18b 152 Pfam PF13437 HlyD family secretion protein 1 82 2.7E-12 T 11-10-2018 TVD_13075 e7c45c6f78f5e30fada2e4e8e489e18b 152 Gene3D G3DSA:2.40.30.170 30 71 1.7E-6 T 11-10-2018 TVD_13075 e7c45c6f78f5e30fada2e4e8e489e18b 152 Gene3D G3DSA:2.40.50.100 1 29 1.7E-6 T 11-10-2018 TVD_13075 e7c45c6f78f5e30fada2e4e8e489e18b 152 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 9 30 4.0E-21 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TVD_13075 e7c45c6f78f5e30fada2e4e8e489e18b 152 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 66 89 4.0E-21 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TVD_13075 e7c45c6f78f5e30fada2e4e8e489e18b 152 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 42 66 4.0E-21 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TVD_02380 13a1cbd2f5f37a33b67922ed836c7111 90 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.9E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02380 13a1cbd2f5f37a33b67922ed836c7111 90 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.9E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02380 13a1cbd2f5f37a33b67922ed836c7111 90 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.9E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02380 13a1cbd2f5f37a33b67922ed836c7111 90 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.51 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02380 13a1cbd2f5f37a33b67922ed836c7111 90 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02380 13a1cbd2f5f37a33b67922ed836c7111 90 PIRSF PIRSF002144 1 90 5.1E-32 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02380 13a1cbd2f5f37a33b67922ed836c7111 90 Gene3D G3DSA:3.30.860.10 1 90 7.4E-38 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02380 13a1cbd2f5f37a33b67922ed836c7111 90 SUPERFAMILY SSF54570 3 83 2.62E-34 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02380 13a1cbd2f5f37a33b67922ed836c7111 90 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 89 3.1E-43 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 TVD_02380 13a1cbd2f5f37a33b67922ed836c7111 90 Pfam PF00203 Ribosomal protein S19 3 83 1.2E-34 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_12585 a51ea7daee267fd5f98b5d26b63dca9f 666 SMART SM00861 355 526 3.4E-67 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TVD_12585 a51ea7daee267fd5f98b5d26b63dca9f 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 2.1E-165 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TVD_12585 a51ea7daee267fd5f98b5d26b63dca9f 666 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TVD_12585 a51ea7daee267fd5f98b5d26b63dca9f 666 SUPERFAMILY SSF52518 345 528 6.8E-68 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TVD_12585 a51ea7daee267fd5f98b5d26b63dca9f 666 Pfam PF02780 Transketolase, C-terminal domain 541 656 8.1E-16 T 11-10-2018 IPR033248 Transketolase, C-terminal domain TVD_12585 a51ea7daee267fd5f98b5d26b63dca9f 666 Gene3D G3DSA:3.40.50.970 327 538 1.2E-81 T 11-10-2018 TVD_12585 a51ea7daee267fd5f98b5d26b63dca9f 666 SUPERFAMILY SSF52922 534 665 6.67E-43 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TVD_12585 a51ea7daee267fd5f98b5d26b63dca9f 666 SUPERFAMILY SSF52518 5 329 1.31E-119 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TVD_12585 a51ea7daee267fd5f98b5d26b63dca9f 666 Gene3D G3DSA:3.40.50.920 539 661 5.8E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TVD_12585 a51ea7daee267fd5f98b5d26b63dca9f 666 Pfam PF02779 Transketolase, pyrimidine binding domain 354 526 2.1E-45 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TVD_12585 a51ea7daee267fd5f98b5d26b63dca9f 666 Gene3D G3DSA:3.40.50.970 3 326 2.9E-132 T 11-10-2018 TVD_12585 a51ea7daee267fd5f98b5d26b63dca9f 666 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TVD_12585 a51ea7daee267fd5f98b5d26b63dca9f 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 665 5.8E-303 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 SUPERFAMILY SSF47226 4 127 8.83E-32 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 468 1.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 504 1.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 528 1.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 547 1.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 SMART SM01231 295 364 8.1E-19 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 295 364 1.1E-17 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 Gene3D G3DSA:1.20.120.160 1 136 5.9E-38 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 549 7.9E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 Pfam PF01584 CheW-like domain 557 684 2.5E-26 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 SUPERFAMILY SSF55874 366 548 8.25E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 Gene3D G3DSA:3.30.565.10 365 549 5.5E-58 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 Pfam PF01627 Hpt domain 8 98 1.5E-18 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 SMART SM00387 409 550 8.5E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 SUPERFAMILY SSF50341 549 681 5.36E-30 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 SUPERFAMILY SSF47384 296 365 6.28E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 SMART SM00260 542 682 1.0E-35 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 Gene3D G3DSA:2.40.50.180 573 637 2.6E-35 T 11-10-2018 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 SMART SM00073 5 100 9.8E-25 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 Gene3D G3DSA:2.30.30.40 550 678 2.6E-35 T 11-10-2018 TVD_00645 f65c8bdb866c83411f18e55299a8f8e3 693 Gene3D G3DSA:1.10.287.560 295 364 1.2E-14 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 TVD_07190 d426319adfc00d612c1959c5d2db318c 398 Gene3D G3DSA:1.20.59.20 211 292 1.4E-13 T 11-10-2018 TVD_07190 d426319adfc00d612c1959c5d2db318c 398 SUPERFAMILY SSF56037 302 389 1.41E-14 T 11-10-2018 TVD_07190 d426319adfc00d612c1959c5d2db318c 398 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 283 20.328 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TVD_07190 d426319adfc00d612c1959c5d2db318c 398 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 3 179 1.8E-43 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TVD_07190 d426319adfc00d612c1959c5d2db318c 398 Pfam PF11734 TilS substrate C-terminal domain 338 389 2.8E-13 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TVD_07190 d426319adfc00d612c1959c5d2db318c 398 Gene3D G3DSA:3.40.50.620 1 207 8.3E-59 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_07190 d426319adfc00d612c1959c5d2db318c 398 Pfam PF09179 TilS substrate binding domain 224 291 7.7E-16 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TVD_07190 d426319adfc00d612c1959c5d2db318c 398 SMART SM00977 338 396 3.4E-13 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TVD_07190 d426319adfc00d612c1959c5d2db318c 398 Pfam PF01171 PP-loop family 3 175 2.5E-47 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 TVD_07190 d426319adfc00d612c1959c5d2db318c 398 SUPERFAMILY SSF82829 221 294 1.39E-16 T 11-10-2018 TVD_07190 d426319adfc00d612c1959c5d2db318c 398 SUPERFAMILY SSF52402 2 189 8.6E-50 T 11-10-2018 TVD_07190 d426319adfc00d612c1959c5d2db318c 398 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 338 380 3.9E-13 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TVD_02260 9ac69294688fba051ba9d13c54d92a72 403 Gene3D G3DSA:1.20.81.30 57 171 2.6E-29 T 11-10-2018 TVD_02260 9ac69294688fba051ba9d13c54d92a72 403 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 164 192 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 TVD_02260 9ac69294688fba051ba9d13c54d92a72 403 Pfam PF00482 Type II secretion system (T2SS), protein F 69 192 1.2E-32 T 11-10-2018 IPR018076 Type II secretion system F domain TVD_02260 9ac69294688fba051ba9d13c54d92a72 403 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 6.9E-34 T 11-10-2018 IPR018076 Type II secretion system F domain TVD_02260 9ac69294688fba051ba9d13c54d92a72 403 Gene3D G3DSA:1.20.81.30 256 367 9.3E-31 T 11-10-2018 TVD_02260 9ac69294688fba051ba9d13c54d92a72 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 164 192 2.5E-18 T 11-10-2018 IPR003004 GspF/PilC family TVD_02260 9ac69294688fba051ba9d13c54d92a72 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 2.5E-18 T 11-10-2018 IPR003004 GspF/PilC family TVD_02260 9ac69294688fba051ba9d13c54d92a72 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 2.5E-18 T 11-10-2018 IPR003004 GspF/PilC family TVD_02260 9ac69294688fba051ba9d13c54d92a72 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 2.5E-18 T 11-10-2018 IPR003004 GspF/PilC family TVD_13140 d5737ac9de2bdf2dee98f07124a65494 446 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 8 446 1.1E-160 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 TVD_13140 d5737ac9de2bdf2dee98f07124a65494 446 SUPERFAMILY SSF47005 143 182 4.97E-9 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 TVD_13140 d5737ac9de2bdf2dee98f07124a65494 446 SUPERFAMILY SSF51230 5 98 3.27E-23 T 11-10-2018 IPR011053 Single hybrid motif TVD_13140 d5737ac9de2bdf2dee98f07124a65494 446 Gene3D G3DSA:4.10.320.10 139 184 5.6E-12 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 TVD_13140 d5737ac9de2bdf2dee98f07124a65494 446 SUPERFAMILY SSF52777 216 445 1.29E-89 T 11-10-2018 TVD_13140 d5737ac9de2bdf2dee98f07124a65494 446 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 216 444 1.7E-82 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 TVD_13140 d5737ac9de2bdf2dee98f07124a65494 446 Gene3D G3DSA:2.40.50.100 1 105 3.7E-20 T 11-10-2018 TVD_13140 d5737ac9de2bdf2dee98f07124a65494 446 Pfam PF00364 Biotin-requiring enzyme 7 78 7.3E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment TVD_13140 d5737ac9de2bdf2dee98f07124a65494 446 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 30 59 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 TVD_13140 d5737ac9de2bdf2dee98f07124a65494 446 Pfam PF02817 e3 binding domain 147 179 2.5E-10 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 TVD_13140 d5737ac9de2bdf2dee98f07124a65494 446 Gene3D G3DSA:3.30.559.10 214 446 1.0E-95 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TVD_03990 b6da308a46b59bebcc81c93ade00f1a2 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 295 430 3.9E-39 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 TVD_03990 b6da308a46b59bebcc81c93ade00f1a2 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 468 605 3.1E-46 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding TVD_03990 b6da308a46b59bebcc81c93ade00f1a2 608 Pfam PF00571 CBS domain 148 205 3.0E-7 T 11-10-2018 IPR000644 CBS domain TVD_03990 b6da308a46b59bebcc81c93ade00f1a2 608 Pfam PF00571 CBS domain 218 268 1.8E-9 T 11-10-2018 IPR000644 CBS domain TVD_03990 b6da308a46b59bebcc81c93ade00f1a2 608 SUPERFAMILY SSF81593 509 572 6.83E-5 T 11-10-2018 TVD_03990 b6da308a46b59bebcc81c93ade00f1a2 608 SUPERFAMILY SSF51206 10 120 5.93E-5 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like TVD_03990 b6da308a46b59bebcc81c93ade00f1a2 608 SMART SM00116 221 270 1.2E-8 T 11-10-2018 IPR000644 CBS domain TVD_03990 b6da308a46b59bebcc81c93ade00f1a2 608 SMART SM00116 155 205 0.0014 T 11-10-2018 IPR000644 CBS domain TVD_03990 b6da308a46b59bebcc81c93ade00f1a2 608 SUPERFAMILY SSF54631 147 268 4.6E-26 T 11-10-2018 TVD_03990 b6da308a46b59bebcc81c93ade00f1a2 608 Gene3D G3DSA:3.10.580.10 143 277 1.6E-30 T 11-10-2018 TVD_05330 09d4b23d785481ba2754d376cc4cade0 280 Pfam PF00472 RF-1 domain 144 252 1.1E-40 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TVD_05330 09d4b23d785481ba2754d376cc4cade0 280 Pfam PF03462 PCRF domain 6 135 2.5E-46 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 TVD_05330 09d4b23d785481ba2754d376cc4cade0 280 Gene3D G3DSA:3.30.70.1660 45 273 5.7E-96 T 11-10-2018 TVD_05330 09d4b23d785481ba2754d376cc4cade0 280 SUPERFAMILY SSF75620 4 277 9.94E-119 T 11-10-2018 TVD_05330 09d4b23d785481ba2754d376cc4cade0 280 SMART SM00937 1 110 7.3E-50 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 TVD_05330 09d4b23d785481ba2754d376cc4cade0 280 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 280 30.64 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 TVD_05330 09d4b23d785481ba2754d376cc4cade0 280 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 160 176 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TVD_05330 09d4b23d785481ba2754d376cc4cade0 280 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 278 5.6E-138 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 TVD_05330 09d4b23d785481ba2754d376cc4cade0 280 Gene3D G3DSA:3.30.160.20 141 236 5.7E-96 T 11-10-2018 TVD_04860 5817e7adf50da21062d066ca82efcf99 245 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 6 243 4.6E-65 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 TVD_04860 5817e7adf50da21062d066ca82efcf99 245 Pfam PF00588 SpoU rRNA Methylase family 8 157 2.0E-31 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TVD_04860 5817e7adf50da21062d066ca82efcf99 245 Gene3D G3DSA:3.40.1280.10 4 167 5.9E-58 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TVD_04860 5817e7adf50da21062d066ca82efcf99 245 Gene3D G3DSA:1.10.8.590 173 245 2.4E-21 T 11-10-2018 TVD_04860 5817e7adf50da21062d066ca82efcf99 245 PIRSF PIRSF004808 3 244 1.6E-66 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 TVD_04860 5817e7adf50da21062d066ca82efcf99 245 SUPERFAMILY SSF75217 5 164 2.75E-34 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TVD_07195 09a8e2d599589ca09165dab76cfae289 321 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 51.401 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_07195 09a8e2d599589ca09165dab76cfae289 321 SUPERFAMILY SSF52096 6 316 8.0E-106 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TVD_07195 09a8e2d599589ca09165dab76cfae289 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 4.7E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_07195 09a8e2d599589ca09165dab76cfae289 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 4.7E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_07195 09a8e2d599589ca09165dab76cfae289 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 4.7E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_07195 09a8e2d599589ca09165dab76cfae289 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 4.7E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_07195 09a8e2d599589ca09165dab76cfae289 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 4.7E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_07195 09a8e2d599589ca09165dab76cfae289 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 4.7E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_07195 09a8e2d599589ca09165dab76cfae289 321 Gene3D G3DSA:3.90.226.10 1 318 3.6E-121 T 11-10-2018 TVD_07195 09a8e2d599589ca09165dab76cfae289 321 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 4 319 1.7E-153 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_07195 09a8e2d599589ca09165dab76cfae289 321 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 3.5E-64 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_10000 ff1ff83cf39d930499a133caa3a080a8 202 SUPERFAMILY SSF47781 65 134 1.11E-19 T 11-10-2018 IPR010994 RuvA domain 2-like TVD_10000 ff1ff83cf39d930499a133caa3a080a8 202 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.4E-15 T 11-10-2018 TVD_10000 ff1ff83cf39d930499a133caa3a080a8 202 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 200 30.457 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 TVD_10000 ff1ff83cf39d930499a133caa3a080a8 202 SUPERFAMILY SSF50249 1 63 6.28E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_10000 ff1ff83cf39d930499a133caa3a080a8 202 SMART SM00278 108 127 2.1 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TVD_10000 ff1ff83cf39d930499a133caa3a080a8 202 SMART SM00278 73 92 2.7 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TVD_10000 ff1ff83cf39d930499a133caa3a080a8 202 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 198 7.1E-48 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 TVD_10000 ff1ff83cf39d930499a133caa3a080a8 202 Pfam PF01330 RuvA N terminal domain 1 62 1.8E-20 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 TVD_10000 ff1ff83cf39d930499a133caa3a080a8 202 Gene3D G3DSA:1.10.8.10 154 200 2.4E-11 T 11-10-2018 TVD_10000 ff1ff83cf39d930499a133caa3a080a8 202 SUPERFAMILY SSF46929 157 198 9.68E-8 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily TVD_10000 ff1ff83cf39d930499a133caa3a080a8 202 Gene3D G3DSA:2.40.50.140 1 66 7.0E-26 T 11-10-2018 TVD_10000 ff1ff83cf39d930499a133caa3a080a8 202 Gene3D G3DSA:1.10.150.20 67 137 4.5E-23 T 11-10-2018 TVD_10000 ff1ff83cf39d930499a133caa3a080a8 202 Pfam PF07499 RuvA, C-terminal domain 157 198 2.4E-11 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 TVD_11645 a7fbbe623302bac9ec32bc28772556ca 352 Gene3D G3DSA:3.30.450.40 111 339 2.4E-40 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_11645 a7fbbe623302bac9ec32bc28772556ca 352 SUPERFAMILY SSF46785 8 89 8.68E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_11645 a7fbbe623302bac9ec32bc28772556ca 352 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 7 336 28.259 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 TVD_11645 a7fbbe623302bac9ec32bc28772556ca 352 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 8 78 4.3E-6 T 11-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 TVD_11645 a7fbbe623302bac9ec32bc28772556ca 352 Gene3D G3DSA:1.10.10.10 1 90 7.5E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_11645 a7fbbe623302bac9ec32bc28772556ca 352 SUPERFAMILY SSF55781 77 345 3.53E-62 T 11-10-2018 TVD_11645 a7fbbe623302bac9ec32bc28772556ca 352 Pfam PF01628 HrcA protein C terminal domain 109 329 8.3E-59 T 11-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 TVD_11645 a7fbbe623302bac9ec32bc28772556ca 352 PIRSF PIRSF005485 5 346 6.6E-107 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 TVD_11645 a7fbbe623302bac9ec32bc28772556ca 352 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 10 342 1.1E-97 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 TVD_11645 a7fbbe623302bac9ec32bc28772556ca 352 Gene3D G3DSA:3.30.390.60 133 234 2.4E-40 T 11-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily TVD_06765 f94370818b68273029c7ddc7bc13d774 365 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 6 357 6.1E-122 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 TVD_06765 f94370818b68273029c7ddc7bc13d774 365 Gene3D G3DSA:2.30.30.280 211 278 7.3E-25 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 TVD_06765 f94370818b68273029c7ddc7bc13d774 365 SUPERFAMILY SSF52402 1 242 4.63E-56 T 11-10-2018 TVD_06765 f94370818b68273029c7ddc7bc13d774 365 Gene3D G3DSA:3.40.50.620 1 209 1.9E-87 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_06765 f94370818b68273029c7ddc7bc13d774 365 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 5 358 37.059 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 TVD_06765 f94370818b68273029c7ddc7bc13d774 365 Pfam PF03054 tRNA methyl transferase 6 357 2.3E-128 T 11-10-2018 TVD_06765 f94370818b68273029c7ddc7bc13d774 365 Gene3D G3DSA:2.40.30.10 280 363 3.5E-23 T 11-10-2018 TVD_02050 236de08f13a8a7e9128c841752c1ebcb 877 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 558 877 2.8E-98 T 11-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal TVD_02050 236de08f13a8a7e9128c841752c1ebcb 877 Pfam PF01433 Peptidase family M1 domain 214 443 1.0E-56 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 TVD_02050 236de08f13a8a7e9128c841752c1ebcb 877 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 876 0.0 T 11-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 TVD_02050 236de08f13a8a7e9128c841752c1ebcb 877 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 4.0E-8 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 TVD_02050 236de08f13a8a7e9128c841752c1ebcb 877 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 4.0E-8 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 TVD_02050 236de08f13a8a7e9128c841752c1ebcb 877 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 4.0E-8 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 TVD_02050 236de08f13a8a7e9128c841752c1ebcb 877 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 264 274 4.0E-8 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 TVD_02050 236de08f13a8a7e9128c841752c1ebcb 877 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 450 553 9.5E-24 T 11-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold TVD_02050 236de08f13a8a7e9128c841752c1ebcb 877 Gene3D G3DSA:1.25.50.10 557 877 3.9E-98 T 11-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily TVD_02050 236de08f13a8a7e9128c841752c1ebcb 877 Gene3D G3DSA:1.10.390.10 286 449 6.7E-63 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily TVD_02050 236de08f13a8a7e9128c841752c1ebcb 877 SUPERFAMILY SSF55486 209 455 2.93E-75 T 11-10-2018 TVD_02050 236de08f13a8a7e9128c841752c1ebcb 877 Gene3D G3DSA:2.60.40.1730 16 200 7.2E-67 T 11-10-2018 TVD_02050 236de08f13a8a7e9128c841752c1ebcb 877 SUPERFAMILY SSF63737 9 199 2.09E-36 T 11-10-2018 TVD_02050 236de08f13a8a7e9128c841752c1ebcb 877 Gene3D G3DSA:2.60.40.1840 450 553 2.3E-26 T 11-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily TVD_02050 236de08f13a8a7e9128c841752c1ebcb 877 Gene3D G3DSA:1.10.1740.60 202 285 5.3E-40 T 11-10-2018 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.7E-26 T 11-10-2018 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 2.7E-26 T 11-10-2018 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 2.7E-26 T 11-10-2018 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 2.7E-26 T 11-10-2018 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 2.7E-26 T 11-10-2018 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 SUPERFAMILY SSF51905 1 311 2.83E-50 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_10160 f6e22936c611e7578753058eab93f7cc 468 Gene3D G3DSA:3.50.50.60 146 266 9.3E-85 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_10160 f6e22936c611e7578753058eab93f7cc 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 3.6E-49 T 11-10-2018 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 3.6E-49 T 11-10-2018 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 3.6E-49 T 11-10-2018 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 3.6E-49 T 11-10-2018 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.6E-49 T 11-10-2018 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 3.6E-49 T 11-10-2018 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 339 360 3.6E-49 T 11-10-2018 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 404 419 3.6E-49 T 11-10-2018 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 SUPERFAMILY SSF55424 342 461 2.75E-22 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 PIRSF PIRSF000350 1 435 9.5E-72 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 Gene3D G3DSA:3.30.390.30 341 460 3.1E-22 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 343 450 2.9E-17 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 Gene3D G3DSA:3.50.50.60 5 328 9.3E-85 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_10160 f6e22936c611e7578753058eab93f7cc 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 322 6.4E-50 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TVD_10160 f6e22936c611e7578753058eab93f7cc 468 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TVD_01980 e1bef51bd3ce6772d927b4fc283e645c 1508 SUPERFAMILY SSF52540 29 414 5.16E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01980 e1bef51bd3ce6772d927b4fc283e645c 1508 Gene3D G3DSA:3.40.50.300 7 223 3.5E-54 T 11-10-2018 TVD_01980 e1bef51bd3ce6772d927b4fc283e645c 1508 Pfam PF00271 Helicase conserved C-terminal domain 294 402 3.2E-13 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_01980 e1bef51bd3ce6772d927b4fc283e645c 1508 SMART SM00382 34 310 0.0037 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_01980 e1bef51bd3ce6772d927b4fc283e645c 1508 SMART SM00487 17 236 8.4E-37 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_01980 e1bef51bd3ce6772d927b4fc283e645c 1508 SMART SM00490 316 402 2.2E-13 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_01980 e1bef51bd3ce6772d927b4fc283e645c 1508 Pfam PF00270 DEAD/DEAH box helicase 22 209 2.3E-28 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TVD_01980 e1bef51bd3ce6772d927b4fc283e645c 1508 Pfam PF08494 DEAD/H associated 662 849 3.3E-68 T 11-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 TVD_01980 e1bef51bd3ce6772d927b4fc283e645c 1508 Gene3D G3DSA:3.40.50.300 287 417 1.0E-23 T 11-10-2018 TVD_07185 08b262fc4dcf232c154bfed9d4aa944c 241 Gene3D G3DSA:3.40.190.10 22 230 6.0E-28 T 11-10-2018 TVD_07185 08b262fc4dcf232c154bfed9d4aa944c 241 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 22 230 5.0E-20 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TVD_07185 08b262fc4dcf232c154bfed9d4aa944c 241 SUPERFAMILY SSF53850 16 230 7.93E-34 T 11-10-2018 TVD_07185 08b262fc4dcf232c154bfed9d4aa944c 241 SMART SM00062 17 236 0.0033 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TVD_07185 08b262fc4dcf232c154bfed9d4aa944c 241 Gene3D G3DSA:3.40.190.10 102 193 6.0E-28 T 11-10-2018 TVD_12550 d74cc763860801cc5da8fa093efcdfb7 298 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 16 296 1.9E-78 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 TVD_12550 d74cc763860801cc5da8fa093efcdfb7 298 SUPERFAMILY SSF56104 5 296 6.21E-101 T 11-10-2018 TVD_12550 d74cc763860801cc5da8fa093efcdfb7 298 Gene3D G3DSA:3.30.470.20 108 252 1.1E-60 T 11-10-2018 TVD_12550 d74cc763860801cc5da8fa093efcdfb7 298 ProSitePatterns PS01057 SAICAR synthetase signature 1. 109 123 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TVD_12550 d74cc763860801cc5da8fa093efcdfb7 298 ProSitePatterns PS01058 SAICAR synthetase signature 2. 208 216 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TVD_12550 d74cc763860801cc5da8fa093efcdfb7 298 Gene3D G3DSA:3.30.200.20 3 107 1.4E-29 T 11-10-2018 TVD_12550 d74cc763860801cc5da8fa093efcdfb7 298 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 296 26.129 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TVD_12550 d74cc763860801cc5da8fa093efcdfb7 298 Pfam PF01259 SAICAR synthetase 16 271 7.9E-99 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TVD_10660 1a8465079604a2e20b65aafc7e9dbecd 109 Gene3D G3DSA:3.40.250.10 2 107 2.2E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_10660 1a8465079604a2e20b65aafc7e9dbecd 109 SMART SM00450 8 104 7.7E-19 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_10660 1a8465079604a2e20b65aafc7e9dbecd 109 Pfam PF00581 Rhodanese-like domain 8 100 1.6E-12 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_10660 1a8465079604a2e20b65aafc7e9dbecd 109 SUPERFAMILY SSF52821 3 107 1.57E-30 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_10910 3c3c779604fa07d2157c8708424bc97e 255 SUPERFAMILY SSF63892 7 245 2.22E-92 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 TVD_10910 3c3c779604fa07d2157c8708424bc97e 255 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 246 115.24 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 TVD_10910 3c3c779604fa07d2157c8708424bc97e 255 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 8 241 3.1E-86 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 TVD_10910 3c3c779604fa07d2157c8708424bc97e 255 Gene3D G3DSA:3.20.20.70 1 251 5.2E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_10910 3c3c779604fa07d2157c8708424bc97e 255 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 8 241 6.1E-95 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 TVD_08940 f99c1e8bdda40fe79b06935812009743 826 SMART SM00086 336 378 6.4E-7 T 11-10-2018 IPR001610 PAC motif TVD_08940 f99c1e8bdda40fe79b06935812009743 826 SMART SM00086 207 249 0.01 T 11-10-2018 IPR001610 PAC motif TVD_08940 f99c1e8bdda40fe79b06935812009743 826 SMART SM00086 81 123 0.019 T 11-10-2018 IPR001610 PAC motif TVD_08940 f99c1e8bdda40fe79b06935812009743 826 SUPERFAMILY SSF141868 565 813 3.79E-85 T 11-10-2018 IPR035919 EAL domain superfamily TVD_08940 f99c1e8bdda40fe79b06935812009743 826 SMART SM00267 378 549 1.4E-47 T 11-10-2018 IPR000160 GGDEF domain TVD_08940 f99c1e8bdda40fe79b06935812009743 826 SUPERFAMILY SSF55785 14 125 1.29E-17 T 11-10-2018 IPR035965 PAS domain superfamily TVD_08940 f99c1e8bdda40fe79b06935812009743 826 Gene3D G3DSA:2.10.70.100 333 380 2.8E-19 T 11-10-2018 TVD_08940 f99c1e8bdda40fe79b06935812009743 826 Gene3D G3DSA:3.30.450.20 136 260 3.2E-23 T 11-10-2018 TVD_08940 f99c1e8bdda40fe79b06935812009743 826 SMART SM00091 261 329 0.051 T 11-10-2018 IPR000014 PAS domain TVD_08940 f99c1e8bdda40fe79b06935812009743 826 SMART SM00091 9 75 0.39 T 11-10-2018 IPR000014 PAS domain TVD_08940 f99c1e8bdda40fe79b06935812009743 826 SMART SM00091 128 194 6.0E-4 T 11-10-2018 IPR000014 PAS domain TVD_08940 f99c1e8bdda40fe79b06935812009743 826 Pfam PF08447 PAS fold 284 372 3.0E-20 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_08940 f99c1e8bdda40fe79b06935812009743 826 SUPERFAMILY SSF55785 139 258 1.54E-19 T 11-10-2018 IPR035965 PAS domain superfamily TVD_08940 f99c1e8bdda40fe79b06935812009743 826 Gene3D G3DSA:3.30.70.270 383 552 8.2E-47 T 11-10-2018 TVD_08940 f99c1e8bdda40fe79b06935812009743 826 Pfam PF00990 Diguanylate cyclase, GGDEF domain 390 544 2.1E-38 T 11-10-2018 IPR000160 GGDEF domain TVD_08940 f99c1e8bdda40fe79b06935812009743 826 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 259 385 1.4E-11 T 11-10-2018 IPR000014 PAS domain TVD_08940 f99c1e8bdda40fe79b06935812009743 826 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 131 256 1.9E-10 T 11-10-2018 IPR000014 PAS domain TVD_08940 f99c1e8bdda40fe79b06935812009743 826 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 127 1.2E-10 T 11-10-2018 IPR000014 PAS domain TVD_08940 f99c1e8bdda40fe79b06935812009743 826 Gene3D G3DSA:3.20.20.450 560 815 2.0E-98 T 11-10-2018 IPR035919 EAL domain superfamily TVD_08940 f99c1e8bdda40fe79b06935812009743 826 SUPERFAMILY SSF55785 246 376 1.66E-22 T 11-10-2018 IPR035965 PAS domain superfamily TVD_08940 f99c1e8bdda40fe79b06935812009743 826 Gene3D G3DSA:3.30.450.20 5 125 5.3E-17 T 11-10-2018 TVD_08940 f99c1e8bdda40fe79b06935812009743 826 Pfam PF08448 PAS fold 16 125 3.4E-11 T 11-10-2018 IPR013656 PAS fold-4 TVD_08940 f99c1e8bdda40fe79b06935812009743 826 Pfam PF08448 PAS fold 136 251 1.5E-12 T 11-10-2018 IPR013656 PAS fold-4 TVD_08940 f99c1e8bdda40fe79b06935812009743 826 SMART SM00052 559 806 8.1E-112 T 11-10-2018 IPR001633 EAL domain TVD_08940 f99c1e8bdda40fe79b06935812009743 826 Pfam PF00563 EAL domain 565 801 8.7E-69 T 11-10-2018 IPR001633 EAL domain TVD_08940 f99c1e8bdda40fe79b06935812009743 826 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 386 547 4.6E-30 T 11-10-2018 IPR000160 GGDEF domain TVD_08940 f99c1e8bdda40fe79b06935812009743 826 SUPERFAMILY SSF55073 394 550 3.3E-40 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_08940 f99c1e8bdda40fe79b06935812009743 826 Gene3D G3DSA:3.30.450.20 261 329 2.6E-20 T 11-10-2018 TVD_11135 d33a9804c9e65d17c64a05ae6a8cc635 219 Pfam PF00665 Integrase core domain 48 161 2.4E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TVD_11135 d33a9804c9e65d17c64a05ae6a8cc635 219 Gene3D G3DSA:3.30.420.10 45 189 1.2E-17 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TVD_11135 d33a9804c9e65d17c64a05ae6a8cc635 219 SUPERFAMILY SSF53098 40 208 3.79E-44 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_00105 e9a440ce622d851dd2bfc81c31dfa892 82 SUPERFAMILY SSF101744 4 78 1.2E-10 T 11-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 TVD_00105 e9a440ce622d851dd2bfc81c31dfa892 82 Gene3D G3DSA:2.30.30.400 10 81 3.5E-7 T 11-10-2018 IPR038626 Rof-like superfamily TVD_04250 4e879a667b894baa8042e0391be47df4 227 SUPERFAMILY SSF63380 1 91 2.98E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TVD_04250 4e879a667b894baa8042e0391be47df4 227 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 195 2.8E-61 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TVD_04250 4e879a667b894baa8042e0391be47df4 227 Gene3D G3DSA:2.40.30.20 102 201 1.3E-34 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_04250 4e879a667b894baa8042e0391be47df4 227 Gene3D G3DSA:2.40.30.20 1 89 1.8E-26 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_04250 4e879a667b894baa8042e0391be47df4 227 SUPERFAMILY SSF63380 93 194 1.62E-32 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TVD_04250 4e879a667b894baa8042e0391be47df4 227 PIRSF PIRSF000498 1 209 5.1E-73 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TVD_04250 4e879a667b894baa8042e0391be47df4 227 Pfam PF00677 Lumazine binding domain 3 87 5.7E-21 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TVD_04250 4e879a667b894baa8042e0391be47df4 227 Pfam PF00677 Lumazine binding domain 100 184 2.3E-24 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TVD_08080 02b58d313831c7092643b551da51fbb8 379 SUPERFAMILY SSF56645 25 233 9.29E-33 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 TVD_08080 02b58d313831c7092643b551da51fbb8 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 24 126 5.1E-9 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 TVD_08080 02b58d313831c7092643b551da51fbb8 379 Gene3D G3DSA:1.10.540.10 24 126 9.3E-12 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 TVD_08080 02b58d313831c7092643b551da51fbb8 379 Gene3D G3DSA:2.40.110.10 139 235 5.7E-13 T 11-10-2018 TVD_00765 3695a9df563623616262044dabc46b07 308 Gene3D G3DSA:3.40.50.1980 29 186 1.0E-29 T 11-10-2018 TVD_00765 3695a9df563623616262044dabc46b07 308 SUPERFAMILY SSF53807 32 305 1.03E-45 T 11-10-2018 TVD_00765 3695a9df563623616262044dabc46b07 308 Pfam PF01297 Zinc-uptake complex component A periplasmic 38 305 8.2E-32 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 TVD_00765 3695a9df563623616262044dabc46b07 308 PRINTS PR00691 Adhesin B signature 60 78 8.8E-5 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TVD_00765 3695a9df563623616262044dabc46b07 308 PRINTS PR00691 Adhesin B signature 35 56 8.8E-5 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TVD_00765 3695a9df563623616262044dabc46b07 308 PRINTS PR00691 Adhesin B signature 79 98 8.8E-5 T 11-10-2018 IPR006129 Adhesin B GO:0007155 TVD_07925 9ee11b57a3322ef6df5b3d1729ebc8db 225 Gene3D G3DSA:2.30.30.760 164 225 2.7E-14 T 11-10-2018 TVD_07925 9ee11b57a3322ef6df5b3d1729ebc8db 225 SMART SM00858 100 162 3.5E-8 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 TVD_07925 9ee11b57a3322ef6df5b3d1729ebc8db 225 Pfam PF13144 Chaperone for flagella basal body P-ring formation 21 223 2.8E-59 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal TVD_07925 9ee11b57a3322ef6df5b3d1729ebc8db 225 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 88 223 8.5E-43 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Gene3D G3DSA:3.30.450.20 742 870 1.6E-36 T 11-10-2018 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SUPERFAMILY SSF55785 747 854 3.66E-27 T 11-10-2018 IPR035965 PAS domain superfamily TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SMART SM00091 275 341 7.6E-6 T 11-10-2018 IPR000014 PAS domain TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SMART SM00091 742 812 1.6E-8 T 11-10-2018 IPR000014 PAS domain TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SUPERFAMILY SSF55785 263 388 2.27E-20 T 11-10-2018 IPR035965 PAS domain superfamily TVD_09760 af903e4b9794449785cc11215c4c2283 1301 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 272 391 1.3E-15 T 11-10-2018 IPR000014 PAS domain TVD_09760 af903e4b9794449785cc11215c4c2283 1301 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 743 863 1.7E-17 T 11-10-2018 IPR000014 PAS domain TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Gene3D G3DSA:3.30.70.270 871 1034 1.2E-53 T 11-10-2018 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Gene3D G3DSA:3.40.50.2300 123 259 4.7E-20 T 11-10-2018 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Pfam PF13426 PAS domain 753 855 5.4E-13 T 11-10-2018 IPR000014 PAS domain TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Gene3D G3DSA:3.30.450.20 267 388 1.4E-21 T 11-10-2018 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Gene3D G3DSA:3.30.450.40 414 567 8.0E-17 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Pfam PF00563 EAL domain 1045 1282 6.1E-74 T 11-10-2018 IPR001633 EAL domain TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Pfam PF00072 Response regulator receiver domain 3 105 2.2E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Pfam PF00072 Response regulator receiver domain 160 243 1.4E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Pfam PF00989 PAS fold 276 386 5.3E-10 T 11-10-2018 IPR013767 PAS fold GO:0006355 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SMART SM00267 856 1029 2.1E-65 T 11-10-2018 IPR000160 GGDEF domain TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SUPERFAMILY SSF55781 415 563 9.16E-18 T 11-10-2018 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SMART SM00086 814 856 0.0045 T 11-10-2018 IPR001610 PAC motif TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SMART SM00086 348 390 1.3E-4 T 11-10-2018 IPR001610 PAC motif TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SUPERFAMILY SSF55073 872 1030 2.67E-45 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_09760 af903e4b9794449785cc11215c4c2283 1301 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 863 1028 3.9E-40 T 11-10-2018 IPR000160 GGDEF domain TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SUPERFAMILY SSF52172 1 120 4.84E-24 T 11-10-2018 IPR011006 CheY-like superfamily TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Gene3D G3DSA:3.40.50.2300 1 122 1.2E-22 T 11-10-2018 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Pfam PF01590 GAF domain 588 732 2.0E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Pfam PF13185 GAF domain 416 553 6.3E-10 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SUPERFAMILY SSF141868 1044 1295 2.88E-86 T 11-10-2018 IPR035919 EAL domain superfamily TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SMART SM00448 134 257 2.8E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SMART SM00448 1 116 2.4E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Gene3D G3DSA:3.30.450.40 568 741 4.5E-14 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Gene3D G3DSA:3.20.20.450 1040 1297 5.5E-100 T 11-10-2018 IPR035919 EAL domain superfamily TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SUPERFAMILY SSF52172 132 275 8.68E-22 T 11-10-2018 IPR011006 CheY-like superfamily TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SUPERFAMILY SSF55781 586 744 1.81E-13 T 11-10-2018 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 Pfam PF00990 Diguanylate cyclase, GGDEF domain 867 1024 1.8E-47 T 11-10-2018 IPR000160 GGDEF domain TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SMART SM00065 585 742 4.5E-4 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SMART SM00065 412 564 0.0047 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_09760 af903e4b9794449785cc11215c4c2283 1301 SMART SM00052 1039 1287 5.2E-112 T 11-10-2018 IPR001633 EAL domain TVD_08845 15526f9bddcf7242a2354d5bc36ae815 454 Pfam PF00072 Response regulator receiver domain 3 109 1.2E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_08845 15526f9bddcf7242a2354d5bc36ae815 454 Pfam PF00072 Response regulator receiver domain 128 241 1.1E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_08845 15526f9bddcf7242a2354d5bc36ae815 454 Gene3D G3DSA:3.40.50.2300 119 255 1.6E-26 T 11-10-2018 TVD_08845 15526f9bddcf7242a2354d5bc36ae815 454 SMART SM00448 126 241 1.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_08845 15526f9bddcf7242a2354d5bc36ae815 454 SMART SM00448 1 114 4.2E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_08845 15526f9bddcf7242a2354d5bc36ae815 454 Gene3D G3DSA:3.40.50.12740 1 118 7.8E-23 T 11-10-2018 TVD_08845 15526f9bddcf7242a2354d5bc36ae815 454 Pfam PF00990 Diguanylate cyclase, GGDEF domain 265 418 1.4E-38 T 11-10-2018 IPR000160 GGDEF domain TVD_08845 15526f9bddcf7242a2354d5bc36ae815 454 SMART SM00267 254 423 3.1E-48 T 11-10-2018 IPR000160 GGDEF domain TVD_08845 15526f9bddcf7242a2354d5bc36ae815 454 Gene3D G3DSA:3.30.70.270 256 423 2.8E-50 T 11-10-2018 TVD_08845 15526f9bddcf7242a2354d5bc36ae815 454 SUPERFAMILY SSF55073 270 421 1.65E-41 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_08845 15526f9bddcf7242a2354d5bc36ae815 454 SUPERFAMILY SSF52172 1 103 1.42E-22 T 11-10-2018 IPR011006 CheY-like superfamily TVD_08845 15526f9bddcf7242a2354d5bc36ae815 454 SUPERFAMILY SSF52172 126 262 3.27E-29 T 11-10-2018 IPR011006 CheY-like superfamily TVD_08845 15526f9bddcf7242a2354d5bc36ae815 454 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 263 421 3.7E-43 T 11-10-2018 IPR000160 GGDEF domain TVD_00745 4a41464a538f5f009fae85bae31672bc 893 Gene3D G3DSA:3.40.50.720 4 133 4.9E-42 T 11-10-2018 TVD_00745 4a41464a538f5f009fae85bae31672bc 893 Gene3D G3DSA:3.40.630.30 728 893 7.9E-46 T 11-10-2018 TVD_00745 4a41464a538f5f009fae85bae31672bc 893 SUPERFAMILY SSF56059 494 705 8.48E-37 T 11-10-2018 TVD_00745 4a41464a538f5f009fae85bae31672bc 893 Pfam PF13549 ATP-grasp domain 482 703 2.9E-79 T 11-10-2018 TVD_00745 4a41464a538f5f009fae85bae31672bc 893 Pfam PF13380 CoA binding domain 15 138 7.4E-23 T 11-10-2018 IPR003781 CoA-binding GO:0048037 TVD_00745 4a41464a538f5f009fae85bae31672bc 893 SMART SM00881 9 104 4.9E-28 T 11-10-2018 IPR003781 CoA-binding GO:0048037 TVD_00745 4a41464a538f5f009fae85bae31672bc 893 SUPERFAMILY SSF55729 731 877 1.1E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_00745 4a41464a538f5f009fae85bae31672bc 893 Gene3D G3DSA:3.30.1490.20 508 585 3.0E-74 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TVD_00745 4a41464a538f5f009fae85bae31672bc 893 Gene3D G3DSA:3.40.50.261 134 294 8.9E-55 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TVD_00745 4a41464a538f5f009fae85bae31672bc 893 Gene3D G3DSA:3.40.50.261 298 461 5.9E-55 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TVD_00745 4a41464a538f5f009fae85bae31672bc 893 SUPERFAMILY SSF52210 133 294 1.31E-42 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TVD_00745 4a41464a538f5f009fae85bae31672bc 893 Pfam PF13302 Acetyltransferase (GNAT) domain 737 875 1.7E-10 T 11-10-2018 IPR000182 GNAT domain TVD_00745 4a41464a538f5f009fae85bae31672bc 893 SUPERFAMILY SSF51735 2 143 1.43E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_00745 4a41464a538f5f009fae85bae31672bc 893 Gene3D G3DSA:3.30.470.20 490 701 3.0E-74 T 11-10-2018 TVD_00745 4a41464a538f5f009fae85bae31672bc 893 SUPERFAMILY SSF52210 299 455 2.49E-45 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TVD_00745 4a41464a538f5f009fae85bae31672bc 893 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 155 292 8.4E-52 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain TVD_04440 670d25070a1c330506207c1993d1002e 724 SMART SM00382 494 680 8.1E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_04440 670d25070a1c330506207c1993d1002e 724 Gene3D G3DSA:3.90.70.10 8 133 4.7E-28 T 11-10-2018 TVD_04440 670d25070a1c330506207c1993d1002e 724 SUPERFAMILY SSF52540 457 704 9.59E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04440 670d25070a1c330506207c1993d1002e 724 Pfam PF00664 ABC transporter transmembrane region 156 421 6.9E-50 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TVD_04440 670d25070a1c330506207c1993d1002e 724 Pfam PF03412 Peptidase C39 family 7 125 6.1E-17 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 TVD_04440 670d25070a1c330506207c1993d1002e 724 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 12 706 0.0 T 11-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 TVD_04440 670d25070a1c330506207c1993d1002e 724 Gene3D G3DSA:3.40.50.300 461 709 4.3E-92 T 11-10-2018 TVD_04440 670d25070a1c330506207c1993d1002e 724 Gene3D G3DSA:1.20.1560.10 138 452 6.2E-79 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TVD_04440 670d25070a1c330506207c1993d1002e 724 SUPERFAMILY SSF90123 140 452 3.66E-70 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TVD_04440 670d25070a1c330506207c1993d1002e 724 Pfam PF00005 ABC transporter 485 634 1.6E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_04440 670d25070a1c330506207c1993d1002e 724 ProSitePatterns PS00211 ABC transporters family signature. 606 620 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_06295 a43466c7f90ca30e76276ea22350ac0f 148 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 45 112 6.0E-20 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 TVD_06295 a43466c7f90ca30e76276ea22350ac0f 148 Pfam PF04347 Flagellar biosynthesis protein, FliO 57 133 3.3E-19 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 TVD_04685 7d6ce33b19381a7a28cce9d2cdde2813 147 Pfam PF01618 MotA/TolQ/ExbB proton channel family 52 144 5.3E-10 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TVD_05955 46504bb076ed360c6e72c4e185bed53a 312 SUPERFAMILY SSF101478 1 295 3.66E-72 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily TVD_05955 46504bb076ed360c6e72c4e185bed53a 312 Pfam PF03747 ADP-ribosylglycohydrolase 1 274 2.1E-67 T 11-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 TVD_05955 46504bb076ed360c6e72c4e185bed53a 312 Gene3D G3DSA:1.10.4080.10 1 302 3.2E-98 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 Gene3D G3DSA:3.30.565.10 1 213 1.3E-77 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 ProSitePatterns PS00177 DNA topoisomerase II signature. 414 422 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 622 0.0 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 Gene3D G3DSA:3.30.230.10 214 387 2.7E-55 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 Gene3D G3DSA:3.40.50.670 388 621 1.6E-89 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 169 2.2E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 SUPERFAMILY SSF55874 3 213 2.88E-68 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 Pfam PF01751 Toprim domain 411 520 4.0E-13 T 11-10-2018 IPR006171 TOPRIM domain TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 SMART SM00433 32 622 7.2E-213 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 1 626 46.512 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 4.5E-25 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 Pfam PF00204 DNA gyrase B 216 381 1.3E-39 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR01098 Topoisomerase IV subunit B signature 133 147 4.3E-109 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR01098 Topoisomerase IV subunit B signature 236 259 4.3E-109 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR01098 Topoisomerase IV subunit B signature 336 359 4.3E-109 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR01098 Topoisomerase IV subunit B signature 172 189 4.3E-109 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR01098 Topoisomerase IV subunit B signature 446 467 4.3E-109 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR01098 Topoisomerase IV subunit B signature 309 324 4.3E-109 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR01098 Topoisomerase IV subunit B signature 535 557 4.3E-109 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR01098 Topoisomerase IV subunit B signature 24 37 4.3E-109 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR01098 Topoisomerase IV subunit B signature 360 385 4.3E-109 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR01098 Topoisomerase IV subunit B signature 467 479 4.3E-109 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR01098 Topoisomerase IV subunit B signature 147 162 4.3E-109 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR01098 Topoisomerase IV subunit B signature 292 308 4.3E-109 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR01098 Topoisomerase IV subunit B signature 501 517 4.3E-109 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR01098 Topoisomerase IV subunit B signature 190 211 4.3E-109 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR00418 DNA topoisomerase II family signature 64 77 5.8E-59 T 11-10-2018 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR00418 DNA topoisomerase II family signature 495 512 5.8E-59 T 11-10-2018 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR00418 DNA topoisomerase II family signature 560 576 5.8E-59 T 11-10-2018 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR00418 DNA topoisomerase II family signature 107 121 5.8E-59 T 11-10-2018 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR00418 DNA topoisomerase II family signature 264 277 5.8E-59 T 11-10-2018 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR00418 DNA topoisomerase II family signature 515 527 5.8E-59 T 11-10-2018 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR00418 DNA topoisomerase II family signature 29 44 5.8E-59 T 11-10-2018 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR00418 DNA topoisomerase II family signature 412 426 5.8E-59 T 11-10-2018 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 PRINTS PR00418 DNA topoisomerase II family signature 477 493 5.8E-59 T 11-10-2018 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 SMART SM00387 25 171 6.7E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 SUPERFAMILY SSF56719 386 619 3.92E-78 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TVD_02660 fb9ffcda4c7fc79ed4c97f91e63bd84e 628 SUPERFAMILY SSF54211 216 380 3.98E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 SUPERFAMILY SSF55874 812 972 5.37E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 PRINTS PR00344 Bacterial sensor protein C-terminal signature 921 931 4.8E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 PRINTS PR00344 Bacterial sensor protein C-terminal signature 958 971 4.8E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 PRINTS PR00344 Bacterial sensor protein C-terminal signature 903 917 4.8E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 PRINTS PR00344 Bacterial sensor protein C-terminal signature 934 952 4.8E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 Gene3D G3DSA:3.30.565.10 828 975 3.1E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 SUPERFAMILY SSF47384 754 822 1.49E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 Pfam PF00989 PAS fold 637 739 1.4E-5 T 11-10-2018 IPR013767 PAS fold GO:0006355 TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 Gene3D G3DSA:3.30.450.20 625 745 3.0E-13 T 11-10-2018 TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 870 972 4.1E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 Gene3D G3DSA:1.10.287.130 746 819 1.2E-15 T 11-10-2018 TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 SMART SM00388 757 822 3.5E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 Pfam PF00512 His Kinase A (phospho-acceptor) domain 758 822 3.8E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 SUPERFAMILY SSF55785 633 734 2.86E-10 T 11-10-2018 IPR035965 PAS domain superfamily TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 SMART SM00387 866 974 7.8E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 634 748 2.6E-6 T 11-10-2018 IPR000014 PAS domain TVD_04315 2fd3d4efd296ca3ea203378513ffd7a5 975 SMART SM00091 634 699 0.0088 T 11-10-2018 IPR000014 PAS domain TVD_09615 ab82b8edd8ce834429a2041dde512bad 261 TIGRFAM TIGR01291 nodJ: ABC-2 type transporter, NodJ family 13 259 5.9E-67 T 11-10-2018 IPR005981 ABC-2 type transporter, NodJ GO:0005215|GO:0009877|GO:0015772|GO:0016020 TVD_09615 ab82b8edd8ce834429a2041dde512bad 261 PIRSF PIRSF006648 2 260 1.9E-27 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_09615 ab82b8edd8ce834429a2041dde512bad 261 Pfam PF01061 ABC-2 type transporter 15 225 4.3E-27 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 TVD_09615 ab82b8edd8ce834429a2041dde512bad 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 34 55 7.2E-40 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_09615 ab82b8edd8ce834429a2041dde512bad 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 203 222 7.2E-40 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_09615 ab82b8edd8ce834429a2041dde512bad 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 109 134 7.2E-40 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_09615 ab82b8edd8ce834429a2041dde512bad 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 146 170 7.2E-40 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_09615 ab82b8edd8ce834429a2041dde512bad 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 64 86 7.2E-40 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_09615 ab82b8edd8ce834429a2041dde512bad 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 183 202 7.2E-40 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_07255 04ff9d3782e2b528f45c2872b5f8ba13 400 SUPERFAMILY SSF69055 301 393 1.14E-28 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TVD_07255 04ff9d3782e2b528f45c2872b5f8ba13 400 Gene3D G3DSA:3.40.50.720 1 152 2.7E-52 T 11-10-2018 TVD_07255 04ff9d3782e2b528f45c2872b5f8ba13 400 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 148 238 2.8E-37 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TVD_07255 04ff9d3782e2b528f45c2872b5f8ba13 400 SUPERFAMILY SSF55347 128 273 3.92E-59 T 11-10-2018 TVD_07255 04ff9d3782e2b528f45c2872b5f8ba13 400 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 393 6.7E-153 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TVD_07255 04ff9d3782e2b528f45c2872b5f8ba13 400 SUPERFAMILY SSF51735 5 152 1.27E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_07255 04ff9d3782e2b528f45c2872b5f8ba13 400 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 134 2.9E-45 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TVD_07255 04ff9d3782e2b528f45c2872b5f8ba13 400 Gene3D G3DSA:1.10.1740.10 311 396 5.6E-28 T 11-10-2018 TVD_07255 04ff9d3782e2b528f45c2872b5f8ba13 400 Pfam PF13288 DXP reductoisomerase C-terminal domain 270 386 2.5E-40 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TVD_07255 04ff9d3782e2b528f45c2872b5f8ba13 400 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 6 391 46.017 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TVD_07255 04ff9d3782e2b528f45c2872b5f8ba13 400 PIRSF PIRSF006205 3 397 2.9E-147 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 TVD_08650 7ae8913fed3cf526611e7f932ab7cf0a 395 Pfam PF07690 Major Facilitator Superfamily 23 345 1.4E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TVD_08650 7ae8913fed3cf526611e7f932ab7cf0a 395 SUPERFAMILY SSF103473 3 390 4.58E-39 T 11-10-2018 IPR036259 MFS transporter superfamily TVD_08650 7ae8913fed3cf526611e7f932ab7cf0a 395 Gene3D G3DSA:1.20.1250.20 200 392 2.2E-16 T 11-10-2018 TVD_08650 7ae8913fed3cf526611e7f932ab7cf0a 395 Gene3D G3DSA:1.20.1250.20 2 185 6.2E-15 T 11-10-2018 TVD_07790 0856db6fa441266078fe2c195ccd260c 260 Hamap MF_01274 Type III pantothenate kinase [coaX]. 3 255 17.368 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 TVD_07790 0856db6fa441266078fe2c195ccd260c 260 Gene3D G3DSA:3.30.420.40 6 247 1.1E-49 T 11-10-2018 TVD_07790 0856db6fa441266078fe2c195ccd260c 260 Pfam PF03309 Type III pantothenate kinase 6 206 2.8E-30 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 TVD_07790 0856db6fa441266078fe2c195ccd260c 260 SUPERFAMILY SSF53067 6 117 1.25E-7 T 11-10-2018 TVD_07790 0856db6fa441266078fe2c195ccd260c 260 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 92 248 9.3E-19 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 TVD_07790 0856db6fa441266078fe2c195ccd260c 260 Gene3D G3DSA:3.30.420.490 121 240 1.1E-49 T 11-10-2018 TVD_07790 0856db6fa441266078fe2c195ccd260c 260 SUPERFAMILY SSF53067 120 251 6.73E-25 T 11-10-2018 TVD_01235 06b75ea0e73982a8fd79b1570738cd7d 220 SUPERFAMILY SSF103088 101 217 2.35E-38 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_01235 06b75ea0e73982a8fd79b1570738cd7d 220 Pfam PF00691 OmpA family 113 208 5.6E-22 T 11-10-2018 IPR006665 OmpA-like domain TVD_01235 06b75ea0e73982a8fd79b1570738cd7d 220 Gene3D G3DSA:3.30.1330.60 77 219 3.3E-50 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_01235 06b75ea0e73982a8fd79b1570738cd7d 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 177 196 9.1E-5 T 11-10-2018 TVD_01235 06b75ea0e73982a8fd79b1570738cd7d 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 197 217 9.1E-5 T 11-10-2018 TVD_01235 06b75ea0e73982a8fd79b1570738cd7d 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 159 176 9.1E-5 T 11-10-2018 TVD_01235 06b75ea0e73982a8fd79b1570738cd7d 220 Pfam PF13488 Glycine zipper 36 83 1.6E-14 T 11-10-2018 IPR039567 Glycine zipper domain TVD_01235 06b75ea0e73982a8fd79b1570738cd7d 220 PRINTS PR01021 OMPA domain signature 114 136 5.5E-17 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TVD_01235 06b75ea0e73982a8fd79b1570738cd7d 220 PRINTS PR01021 OMPA domain signature 159 175 5.5E-17 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TVD_01235 06b75ea0e73982a8fd79b1570738cd7d 220 PRINTS PR01021 OMPA domain signature 144 159 5.5E-17 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TVD_05770 a524b65a927969b992bcc1129add4525 385 SUPERFAMILY SSF159501 33 291 2.93E-66 T 11-10-2018 TVD_05770 a524b65a927969b992bcc1129add4525 385 SUPERFAMILY SSF50156 295 376 8.39E-13 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TVD_05770 a524b65a927969b992bcc1129add4525 385 Gene3D G3DSA:1.10.8.760 155 218 1.5E-24 T 11-10-2018 TVD_05770 a524b65a927969b992bcc1129add4525 385 Gene3D G3DSA:3.40.50.11550 42 268 1.5E-24 T 11-10-2018 TVD_05770 a524b65a927969b992bcc1129add4525 385 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 51 257 2.5E-58 T 11-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN TVD_05770 a524b65a927969b992bcc1129add4525 385 Gene3D G3DSA:2.30.42.10 294 383 7.5E-13 T 11-10-2018 TVD_05770 a524b65a927969b992bcc1129add4525 385 SMART SM00228 301 372 7.8E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_05770 a524b65a927969b992bcc1129add4525 385 Pfam PF13180 PDZ domain 303 375 6.0E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_10560 5d7fd2e2213018f59bc41637ffeb33dc 401 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_10560 5d7fd2e2213018f59bc41637ffeb33dc 401 Pfam PF00005 ABC transporter 45 192 5.9E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_10560 5d7fd2e2213018f59bc41637ffeb33dc 401 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 392 1.1E-127 T 11-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 TVD_10560 5d7fd2e2213018f59bc41637ffeb33dc 401 Pfam PF00571 CBS domain 343 389 1.9E-4 T 11-10-2018 IPR000644 CBS domain TVD_10560 5d7fd2e2213018f59bc41637ffeb33dc 401 SMART SM00382 53 242 1.0E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_10560 5d7fd2e2213018f59bc41637ffeb33dc 401 SUPERFAMILY SSF52540 39 271 2.82E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10560 5d7fd2e2213018f59bc41637ffeb33dc 401 Gene3D G3DSA:3.40.50.300 31 268 2.2E-70 T 11-10-2018 TVD_10560 5d7fd2e2213018f59bc41637ffeb33dc 401 Gene3D G3DSA:3.10.580.10 275 395 9.5E-8 T 11-10-2018 TVD_10560 5d7fd2e2213018f59bc41637ffeb33dc 401 SUPERFAMILY SSF54631 276 388 6.06E-14 T 11-10-2018 TVD_11765 52a45324a0f21621ebed97a13c9dbd4f 118 Gene3D G3DSA:2.30.30.790 5 118 2.2E-18 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_11765 52a45324a0f21621ebed97a13c9dbd4f 118 Pfam PF01245 Ribosomal protein L19 3 112 1.1E-48 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_11765 52a45324a0f21621ebed97a13c9dbd4f 118 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_11765 52a45324a0f21621ebed97a13c9dbd4f 118 SUPERFAMILY SSF50104 1 116 3.81E-47 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily TVD_11765 52a45324a0f21621ebed97a13c9dbd4f 118 PIRSF PIRSF002191 1 118 9.4E-50 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_11765 52a45324a0f21621ebed97a13c9dbd4f 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.0E-48 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_11765 52a45324a0f21621ebed97a13c9dbd4f 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.692 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_11765 52a45324a0f21621ebed97a13c9dbd4f 118 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.1E-40 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_11765 52a45324a0f21621ebed97a13c9dbd4f 118 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.1E-40 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_11765 52a45324a0f21621ebed97a13c9dbd4f 118 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.1E-40 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 Gene3D G3DSA:3.30.300.10 406 525 6.0E-53 T 11-10-2018 TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.7E-6 T 11-10-2018 TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 1.7E-6 T 11-10-2018 TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.7E-6 T 11-10-2018 TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 55.655 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 204 1.1E-75 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 SUPERFAMILY SSF52402 197 420 3.75E-58 T 11-10-2018 TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 SUPERFAMILY SSF52317 8 237 7.64E-56 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 Pfam PF02540 NAD synthase 220 297 5.3E-8 T 11-10-2018 IPR022310 NAD/GMP synthase TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 Pfam PF00958 GMP synthase C terminal domain 433 524 3.1E-43 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 Gene3D G3DSA:3.40.50.620 209 405 8.1E-75 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 SUPERFAMILY SSF54810 405 525 2.48E-51 T 11-10-2018 TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 Gene3D G3DSA:3.40.50.880 9 206 4.7E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 7.3E-151 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 Pfam PF00117 Glutamine amidotransferase class-I 12 199 3.8E-39 T 11-10-2018 IPR017926 Glutamine amidotransferase TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.0E-7 T 11-10-2018 TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.0E-7 T 11-10-2018 TVD_03190 9fcc1a7d7a2a0de66634deeca78bba46 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.0E-7 T 11-10-2018 TVD_05260 585018a97eaaae940e29b3b88fd9b7d1 362 SUPERFAMILY SSF46689 28 135 1.61E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_05260 585018a97eaaae940e29b3b88fd9b7d1 362 Pfam PF13565 Homeodomain-like domain 60 131 9.7E-12 T 11-10-2018 TVD_05260 585018a97eaaae940e29b3b88fd9b7d1 362 SUPERFAMILY SSF53098 203 343 2.28E-10 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_05260 585018a97eaaae940e29b3b88fd9b7d1 362 Pfam PF13358 DDE superfamily endonuclease 172 317 6.2E-23 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain TVD_13575 04bc29953758e2b7c2d215dcc429f397 513 SUPERFAMILY SSF52540 96 381 9.02E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_13575 04bc29953758e2b7c2d215dcc429f397 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 4.1E-74 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_13575 04bc29953758e2b7c2d215dcc429f397 513 Gene3D G3DSA:2.40.30.20 1 93 5.4E-36 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_13575 04bc29953758e2b7c2d215dcc429f397 513 Gene3D G3DSA:3.40.50.300 94 382 2.4E-132 T 11-10-2018 TVD_13575 04bc29953758e2b7c2d215dcc429f397 513 Gene3D G3DSA:1.20.150.20 383 513 2.9E-48 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13575 04bc29953758e2b7c2d215dcc429f397 513 SUPERFAMILY SSF50615 10 94 4.91E-31 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_13575 04bc29953758e2b7c2d215dcc429f397 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 512 7.9E-255 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13575 04bc29953758e2b7c2d215dcc429f397 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 2.0E-45 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13575 04bc29953758e2b7c2d215dcc429f397 513 PIRSF PIRSF039088 1 513 2.5E-239 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13575 04bc29953758e2b7c2d215dcc429f397 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 2.9E-16 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_13575 04bc29953758e2b7c2d215dcc429f397 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_13575 04bc29953758e2b7c2d215dcc429f397 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 51.124 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13575 04bc29953758e2b7c2d215dcc429f397 513 SUPERFAMILY SSF47917 383 511 3.14E-46 T 11-10-2018 TVD_06795 657da34f6ba5fe749d467c7c3c0e3ddd 460 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TVD_06795 657da34f6ba5fe749d467c7c3c0e3ddd 460 Pfam PF00206 Lyase 14 337 5.8E-96 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal TVD_06795 657da34f6ba5fe749d467c7c3c0e3ddd 460 Hamap MF_00743 Fumarate hydratase class II [fumC]. 6 457 72.137 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TVD_06795 657da34f6ba5fe749d467c7c3c0e3ddd 460 Gene3D G3DSA:1.10.40.30 403 460 3.8E-17 T 11-10-2018 TVD_06795 657da34f6ba5fe749d467c7c3c0e3ddd 460 Gene3D G3DSA:1.20.200.10 134 402 2.2E-97 T 11-10-2018 TVD_06795 657da34f6ba5fe749d467c7c3c0e3ddd 460 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 1.4E-30 T 11-10-2018 IPR000362 Fumarate lyase family TVD_06795 657da34f6ba5fe749d467c7c3c0e3ddd 460 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 1.4E-30 T 11-10-2018 IPR000362 Fumarate lyase family TVD_06795 657da34f6ba5fe749d467c7c3c0e3ddd 460 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 1.4E-30 T 11-10-2018 IPR000362 Fumarate lyase family TVD_06795 657da34f6ba5fe749d467c7c3c0e3ddd 460 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 1.4E-30 T 11-10-2018 IPR000362 Fumarate lyase family TVD_06795 657da34f6ba5fe749d467c7c3c0e3ddd 460 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 3.7E-5 T 11-10-2018 TVD_06795 657da34f6ba5fe749d467c7c3c0e3ddd 460 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 3.7E-5 T 11-10-2018 TVD_06795 657da34f6ba5fe749d467c7c3c0e3ddd 460 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 3.7E-5 T 11-10-2018 TVD_06795 657da34f6ba5fe749d467c7c3c0e3ddd 460 SUPERFAMILY SSF48557 6 455 3.68E-134 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 TVD_06795 657da34f6ba5fe749d467c7c3c0e3ddd 460 Gene3D G3DSA:1.10.275.10 7 133 1.7E-50 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal TVD_06795 657da34f6ba5fe749d467c7c3c0e3ddd 460 Pfam PF10415 Fumarase C C-terminus 403 455 2.1E-15 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TVD_10590 cac5f45e3fc4cfc4efd94aca6fe472c1 390 Pfam PF04055 Radical SAM superfamily 64 240 6.3E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TVD_10590 cac5f45e3fc4cfc4efd94aca6fe472c1 390 Gene3D G3DSA:3.20.20.70 48 301 4.0E-20 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_10590 cac5f45e3fc4cfc4efd94aca6fe472c1 390 SMART SM00729 58 282 6.8E-22 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TVD_10590 cac5f45e3fc4cfc4efd94aca6fe472c1 390 SUPERFAMILY SSF102114 50 278 3.14E-29 T 11-10-2018 TVD_09445 17cb729903041dd0ee804d9111be33b3 104 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 9 70 6.0E-28 T 11-10-2018 TVD_09445 17cb729903041dd0ee804d9111be33b3 104 Gene3D G3DSA:3.30.70.1710 2 91 1.1E-33 T 11-10-2018 TVD_09445 17cb729903041dd0ee804d9111be33b3 104 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 26 45 - T 11-10-2018 IPR020808 Bacterial microcompartments protein, conserved site TVD_09445 17cb729903041dd0ee804d9111be33b3 104 Pfam PF00936 BMC domain 9 84 9.7E-24 T 11-10-2018 IPR000249 Microcompartment protein, bacteria TVD_09445 17cb729903041dd0ee804d9111be33b3 104 SUPERFAMILY SSF143414 9 96 3.4E-26 T 11-10-2018 IPR037233 CcmK-like superfamily TVD_09445 17cb729903041dd0ee804d9111be33b3 104 SMART SM00877 8 85 8.0E-28 T 11-10-2018 IPR000249 Microcompartment protein, bacteria TVD_00615 56b4b9618e7d5f52fbf415f2e542a750 359 Gene3D G3DSA:3.40.50.180 157 356 3.0E-71 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal TVD_00615 56b4b9618e7d5f52fbf415f2e542a750 359 PIRSF PIRSF000876 5 356 8.8E-135 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TVD_00615 56b4b9618e7d5f52fbf415f2e542a750 359 Gene3D G3DSA:3.40.50.2300 6 137 2.2E-32 T 11-10-2018 TVD_00615 56b4b9618e7d5f52fbf415f2e542a750 359 SUPERFAMILY SSF52738 163 352 5.62E-66 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal TVD_00615 56b4b9618e7d5f52fbf415f2e542a750 359 Pfam PF00072 Response regulator receiver domain 10 112 1.1E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_00615 56b4b9618e7d5f52fbf415f2e542a750 359 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 8 352 40.864 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TVD_00615 56b4b9618e7d5f52fbf415f2e542a750 359 SMART SM00448 8 124 1.2E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_00615 56b4b9618e7d5f52fbf415f2e542a750 359 SUPERFAMILY SSF52172 6 114 4.84E-30 T 11-10-2018 IPR011006 CheY-like superfamily TVD_00615 56b4b9618e7d5f52fbf415f2e542a750 359 Pfam PF01339 CheB methylesterase 168 347 9.5E-57 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TVD_03900 67ae49c86c07db3d1ea88e5894649908 209 PIRSF PIRSF005229 3 209 6.3E-101 T 11-10-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 TVD_03900 67ae49c86c07db3d1ea88e5894649908 209 Pfam PF01786 Alternative oxidase 11 203 3.4E-81 T 11-10-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 TVD_03900 67ae49c86c07db3d1ea88e5894649908 209 Gene3D G3DSA:1.20.1260.140 5 209 2.1E-90 T 11-10-2018 IPR038659 Alternative oxidase superfamily TVD_07800 13ca9d4b16f49126c8ac11b63a8bfafb 247 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 142 170 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 TVD_07800 13ca9d4b16f49126c8ac11b63a8bfafb 247 Pfam PF01464 Transglycosylase SLT domain 124 231 7.6E-29 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 TVD_07800 13ca9d4b16f49126c8ac11b63a8bfafb 247 Gene3D G3DSA:1.10.530.10 92 242 6.3E-47 T 11-10-2018 TVD_07800 13ca9d4b16f49126c8ac11b63a8bfafb 247 SUPERFAMILY SSF53955 101 240 5.32E-48 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TVD_11360 8fe6c9d0a94b127c4294e0a65f9415e1 181 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 11 142 9.9E-39 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 TVD_11360 8fe6c9d0a94b127c4294e0a65f9415e1 181 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 12 142 4.8E-32 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 TVD_11360 8fe6c9d0a94b127c4294e0a65f9415e1 181 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 97 108 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 TVD_11360 8fe6c9d0a94b127c4294e0a65f9415e1 181 Gene3D G3DSA:3.30.70.560 9 165 8.0E-47 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 TVD_11360 8fe6c9d0a94b127c4294e0a65f9415e1 181 SUPERFAMILY SSF55083 10 150 6.8E-45 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 TVD_02135 43132a748c5633dea1e0dc391b07a060 146 SUPERFAMILY SSF89447 1 131 5.83E-47 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily TVD_02135 43132a748c5633dea1e0dc391b07a060 146 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 119 4.0E-39 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 TVD_02135 43132a748c5633dea1e0dc391b07a060 146 Pfam PF02381 MraZ protein, putative antitoxin-like 77 130 7.8E-18 T 11-10-2018 IPR020603 MraZ domain TVD_02135 43132a748c5633dea1e0dc391b07a060 146 Pfam PF02381 MraZ protein, putative antitoxin-like 1 74 6.9E-16 T 11-10-2018 IPR020603 MraZ domain TVD_02135 43132a748c5633dea1e0dc391b07a060 146 Gene3D G3DSA:2.40.330.20 1 140 3.2E-44 T 11-10-2018 IPR038619 MraZ superfamily TVD_02135 43132a748c5633dea1e0dc391b07a060 146 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 130 1.6E-45 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 TVD_02135 43132a748c5633dea1e0dc391b07a060 146 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 146 53.897 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 TVD_10790 58940c65a05d0c8680b43327e9957b3e 291 Pfam PF00990 Diguanylate cyclase, GGDEF domain 109 277 1.2E-47 T 11-10-2018 IPR000160 GGDEF domain TVD_10790 58940c65a05d0c8680b43327e9957b3e 291 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 104 280 1.8E-53 T 11-10-2018 IPR000160 GGDEF domain TVD_10790 58940c65a05d0c8680b43327e9957b3e 291 SUPERFAMILY SSF55073 113 279 8.63E-50 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_10790 58940c65a05d0c8680b43327e9957b3e 291 SMART SM00267 97 281 5.4E-65 T 11-10-2018 IPR000160 GGDEF domain TVD_10790 58940c65a05d0c8680b43327e9957b3e 291 Gene3D G3DSA:3.30.70.270 102 283 2.8E-60 T 11-10-2018 TVD_02730 403b4158bfd9b91774462f87bfd89e5f 119 Pfam PF09722 Protein of unknown function (DUF2384) 69 117 4.5E-12 T 11-10-2018 IPR024467 Domain of unknown function DUF2384 TVD_11690 8167c3da7bd9db670644fe7010ded6a4 221 Pfam PF08238 Sel1 repeat 75 110 2.3E-7 T 11-10-2018 IPR006597 Sel1-like repeat TVD_11690 8167c3da7bd9db670644fe7010ded6a4 221 Pfam PF08238 Sel1 repeat 150 181 1.8E-4 T 11-10-2018 IPR006597 Sel1-like repeat TVD_11690 8167c3da7bd9db670644fe7010ded6a4 221 Pfam PF08238 Sel1 repeat 111 145 2.4E-8 T 11-10-2018 IPR006597 Sel1-like repeat TVD_11690 8167c3da7bd9db670644fe7010ded6a4 221 Pfam PF08238 Sel1 repeat 40 73 3.8E-7 T 11-10-2018 IPR006597 Sel1-like repeat TVD_11690 8167c3da7bd9db670644fe7010ded6a4 221 Gene3D G3DSA:1.25.40.10 126 216 6.5E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_11690 8167c3da7bd9db670644fe7010ded6a4 221 SUPERFAMILY SSF81901 10 186 7.94E-41 T 11-10-2018 TVD_11690 8167c3da7bd9db670644fe7010ded6a4 221 SMART SM00671 147 182 1.1E-4 T 11-10-2018 IPR006597 Sel1-like repeat TVD_11690 8167c3da7bd9db670644fe7010ded6a4 221 SMART SM00671 39 74 8.5E-6 T 11-10-2018 IPR006597 Sel1-like repeat TVD_11690 8167c3da7bd9db670644fe7010ded6a4 221 SMART SM00671 75 110 1.3E-7 T 11-10-2018 IPR006597 Sel1-like repeat TVD_11690 8167c3da7bd9db670644fe7010ded6a4 221 SMART SM00671 111 146 3.1E-9 T 11-10-2018 IPR006597 Sel1-like repeat TVD_11690 8167c3da7bd9db670644fe7010ded6a4 221 Gene3D G3DSA:1.25.40.10 2 125 1.3E-28 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_13260 cbe5959df794736fe125d88f1560b86a 432 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 414 423 - T 11-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 TVD_13260 cbe5959df794736fe125d88f1560b86a 432 Pfam PF00374 Nickel-dependent hydrogenase 42 128 6.2E-13 T 11-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 TVD_13260 cbe5959df794736fe125d88f1560b86a 432 Pfam PF00374 Nickel-dependent hydrogenase 338 423 1.2E-7 T 11-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 TVD_13260 cbe5959df794736fe125d88f1560b86a 432 Gene3D G3DSA:1.10.645.10 3 423 9.3E-100 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_13260 cbe5959df794736fe125d88f1560b86a 432 SUPERFAMILY SSF56762 6 423 1.44E-91 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 SMART SM00052 586 834 4.2E-103 T 11-10-2018 IPR001633 EAL domain TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 Gene3D G3DSA:3.30.450.20 279 397 3.1E-24 T 11-10-2018 TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 306 405 5.6E-6 T 11-10-2018 IPR000014 PAS domain TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 SUPERFAMILY SSF55073 415 578 2.88E-47 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 Pfam PF00990 Diguanylate cyclase, GGDEF domain 410 571 3.2E-48 T 11-10-2018 IPR000160 GGDEF domain TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 SUPERFAMILY SSF55785 303 401 5.06E-16 T 11-10-2018 IPR035965 PAS domain superfamily TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 Pfam PF00563 EAL domain 592 829 1.8E-70 T 11-10-2018 IPR001633 EAL domain TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 SUPERFAMILY SSF141868 592 835 6.8E-83 T 11-10-2018 IPR035919 EAL domain superfamily TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 Gene3D G3DSA:3.30.70.270 404 589 8.1E-61 T 11-10-2018 TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 Gene3D G3DSA:3.20.20.450 590 837 6.7E-95 T 11-10-2018 IPR035919 EAL domain superfamily TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 SMART SM00267 399 576 5.8E-55 T 11-10-2018 IPR000160 GGDEF domain TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 Pfam PF08447 PAS fold 308 388 1.0E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 574 1.1E-43 T 11-10-2018 IPR000160 GGDEF domain TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 Pfam PF03707 Bacterial signalling protein N terminal repeat 65 112 5.0E-14 T 11-10-2018 IPR005330 MHYT domain TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 Pfam PF03707 Bacterial signalling protein N terminal repeat 200 250 1.9E-4 T 11-10-2018 IPR005330 MHYT domain TVD_13340 665be34d968ed43ca9eaef7816689ac4 837 Pfam PF03707 Bacterial signalling protein N terminal repeat 128 172 4.8E-9 T 11-10-2018 IPR005330 MHYT domain TVD_11125 5b864887f230cc0414ae7d181dd8e033 277 SUPERFAMILY SSF52821 45 152 1.7E-17 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_11125 5b864887f230cc0414ae7d181dd8e033 277 Pfam PF00581 Rhodanese-like domain 59 142 1.9E-10 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_11125 5b864887f230cc0414ae7d181dd8e033 277 Gene3D G3DSA:3.40.250.10 173 275 1.0E-6 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_11125 5b864887f230cc0414ae7d181dd8e033 277 Gene3D G3DSA:3.40.250.10 44 148 6.2E-14 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_11125 5b864887f230cc0414ae7d181dd8e033 277 SUPERFAMILY SSF52821 170 274 1.22E-9 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_11125 5b864887f230cc0414ae7d181dd8e033 277 SMART SM00450 175 276 4.4 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_11125 5b864887f230cc0414ae7d181dd8e033 277 SMART SM00450 46 147 1.4E-9 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_04100 9876e566c1787d04e7505041330ec51b 367 Pfam PF01571 Aminomethyltransferase folate-binding domain 9 255 1.5E-87 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain TVD_04100 9876e566c1787d04e7505041330ec51b 367 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 357 4.0E-120 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 TVD_04100 9876e566c1787d04e7505041330ec51b 367 SUPERFAMILY SSF101790 272 359 1.03E-21 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal TVD_04100 9876e566c1787d04e7505041330ec51b 367 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 352 8.3E-16 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TVD_04100 9876e566c1787d04e7505041330ec51b 367 Gene3D G3DSA:4.10.1250.10 233 276 6.7E-21 T 11-10-2018 TVD_04100 9876e566c1787d04e7505041330ec51b 367 Gene3D G3DSA:2.40.30.110 279 366 2.9E-24 T 11-10-2018 TVD_04100 9876e566c1787d04e7505041330ec51b 367 Gene3D G3DSA:3.30.70.1400 53 140 3.0E-82 T 11-10-2018 TVD_04100 9876e566c1787d04e7505041330ec51b 367 Hamap MF_00259 Aminomethyltransferase [gcvT]. 3 357 42.252 T 11-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TVD_04100 9876e566c1787d04e7505041330ec51b 367 PIRSF PIRSF006487 1 364 1.2E-81 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 TVD_04100 9876e566c1787d04e7505041330ec51b 367 SUPERFAMILY SSF103025 3 279 1.79E-93 T 11-10-2018 TVD_04100 9876e566c1787d04e7505041330ec51b 367 Gene3D G3DSA:3.30.1360.120 8 232 3.0E-82 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TVD_11225 f6ac13e43e44087a9998ce1e1bbe7b45 687 SUPERFAMILY SSF50249 2 169 1.47E-35 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_11225 f6ac13e43e44087a9998ce1e1bbe7b45 687 SUPERFAMILY SSF52540 446 648 1.49E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_11225 f6ac13e43e44087a9998ce1e1bbe7b45 687 Pfam PF00271 Helicase conserved C-terminal domain 476 582 6.2E-17 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_11225 f6ac13e43e44087a9998ce1e1bbe7b45 687 Pfam PF17191 RecG wedge domain 10 166 1.6E-19 T 11-10-2018 IPR033454 RecG, wedge domain TVD_11225 f6ac13e43e44087a9998ce1e1bbe7b45 687 SMART SM00490 499 583 5.3E-23 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_11225 f6ac13e43e44087a9998ce1e1bbe7b45 687 Pfam PF00270 DEAD/DEAH box helicase 270 425 6.8E-15 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TVD_11225 f6ac13e43e44087a9998ce1e1bbe7b45 687 Gene3D G3DSA:3.40.50.300 206 445 1.0E-80 T 11-10-2018 TVD_11225 f6ac13e43e44087a9998ce1e1bbe7b45 687 SMART SM00487 262 454 4.4E-32 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_11225 f6ac13e43e44087a9998ce1e1bbe7b45 687 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 25 657 2.4E-212 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 TVD_11225 f6ac13e43e44087a9998ce1e1bbe7b45 687 SUPERFAMILY SSF52540 208 448 8.75E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_11225 f6ac13e43e44087a9998ce1e1bbe7b45 687 Gene3D G3DSA:2.40.50.140 43 135 1.6E-7 T 11-10-2018 TVD_11225 f6ac13e43e44087a9998ce1e1bbe7b45 687 Gene3D G3DSA:3.40.50.300 452 624 2.1E-56 T 11-10-2018 TVD_09730 da9fe2a3350745fba3bddf3c6e247ba3 460 Pfam PF08668 HDOD domain 41 205 1.0E-19 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD TVD_09730 da9fe2a3350745fba3bddf3c6e247ba3 460 Gene3D G3DSA:1.10.3210.10 30 250 4.1E-22 T 11-10-2018 TVD_09730 da9fe2a3350745fba3bddf3c6e247ba3 460 SUPERFAMILY SSF109604 40 267 4.08E-25 T 11-10-2018 TVD_10655 30f5046cc5ad6317da839b0cd7712ed1 76 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 8 32 - T 11-10-2018 IPR001455 TusA-like domain TVD_10655 30f5046cc5ad6317da839b0cd7712ed1 76 SUPERFAMILY SSF64307 4 75 4.32E-24 T 11-10-2018 IPR036868 TusA-like domain superfamily TVD_10655 30f5046cc5ad6317da839b0cd7712ed1 76 Pfam PF01206 Sulfurtransferase TusA 7 75 4.3E-23 T 11-10-2018 IPR001455 TusA-like domain TVD_10655 30f5046cc5ad6317da839b0cd7712ed1 76 Gene3D G3DSA:3.30.110.40 1 76 1.0E-30 T 11-10-2018 IPR036868 TusA-like domain superfamily TVD_07690 f5b59835c84d3adb90c266a525997453 2880 Gene3D G3DSA:1.50.10.10 2390 2802 1.8E-197 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 TVD_07690 f5b59835c84d3adb90c266a525997453 2880 Gene3D G3DSA:1.50.10.140 979 1173 5.2E-18 T 11-10-2018 TVD_07690 f5b59835c84d3adb90c266a525997453 2880 Gene3D G3DSA:2.60.420.10 2386 2865 1.8E-197 T 11-10-2018 TVD_07690 f5b59835c84d3adb90c266a525997453 2880 SMART SM01068 1545 1606 2.1E-22 T 11-10-2018 IPR009342 Putative carbohydrate binding domain TVD_07690 f5b59835c84d3adb90c266a525997453 2880 SMART SM01068 2083 2148 2.9E-30 T 11-10-2018 IPR009342 Putative carbohydrate binding domain TVD_07690 f5b59835c84d3adb90c266a525997453 2880 Pfam PF06165 Glycosyltransferase family 36 2106 2345 2.5E-81 T 11-10-2018 IPR010383 Glycosyl hydrolase 94 TVD_07690 f5b59835c84d3adb90c266a525997453 2880 Pfam PF06165 Glycosyltransferase family 36 1567 1820 1.1E-83 T 11-10-2018 IPR010383 Glycosyl hydrolase 94 TVD_07690 f5b59835c84d3adb90c266a525997453 2880 SUPERFAMILY SSF74650 1553 1822 3.77E-84 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 TVD_07690 f5b59835c84d3adb90c266a525997453 2880 Gene3D G3DSA:1.50.10.140 1328 1527 1.6E-10 T 11-10-2018 TVD_07690 f5b59835c84d3adb90c266a525997453 2880 SUPERFAMILY SSF48208 2352 2874 1.42E-98 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TVD_07690 f5b59835c84d3adb90c266a525997453 2880 Pfam PF10091 Putative glucoamylase 1325 1514 2.1E-16 T 11-10-2018 IPR019282 Domain of unknown function DUF2329 TVD_07690 f5b59835c84d3adb90c266a525997453 2880 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2376 2802 3.3E-120 T 11-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain TVD_07690 f5b59835c84d3adb90c266a525997453 2880 SUPERFAMILY SSF74650 2083 2347 1.79E-88 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 TVD_07690 f5b59835c84d3adb90c266a525997453 2880 Gene3D G3DSA:2.70.98.40 1555 1854 5.3E-94 T 11-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily TVD_07690 f5b59835c84d3adb90c266a525997453 2880 Gene3D G3DSA:2.70.98.40 2085 2381 7.8E-100 T 11-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily TVD_08990 e9ba9ea095f3829b4fef91425b1c7517 354 SUPERFAMILY SSF53474 81 325 1.52E-27 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_08990 e9ba9ea095f3829b4fef91425b1c7517 354 Gene3D G3DSA:3.40.50.1820 80 322 2.2E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_01885 a99635a869b641cbf54aa3ffe4aa6ee2 256 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 19 256 9.1E-108 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 TVD_01885 a99635a869b641cbf54aa3ffe4aa6ee2 256 Pfam PF00005 ABC transporter 34 181 1.4E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_01885 a99635a869b641cbf54aa3ffe4aa6ee2 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 4.2E-8 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TVD_01885 a99635a869b641cbf54aa3ffe4aa6ee2 256 Gene3D G3DSA:3.40.50.300 19 256 1.3E-68 T 11-10-2018 TVD_01885 a99635a869b641cbf54aa3ffe4aa6ee2 256 SMART SM00382 43 246 4.0E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_01885 a99635a869b641cbf54aa3ffe4aa6ee2 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_01885 a99635a869b641cbf54aa3ffe4aa6ee2 256 SUPERFAMILY SSF52540 22 252 1.07E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01680 6d117f3106f9b898599292acb0214185 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 40 7.6E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01680 6d117f3106f9b898599292acb0214185 156 PRINTS PR00813 Bacterial general secretion pathway protein G signature 19 44 1.2E-18 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 TVD_01680 6d117f3106f9b898599292acb0214185 156 PRINTS PR00813 Bacterial general secretion pathway protein G signature 55 73 1.2E-18 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 TVD_01680 6d117f3106f9b898599292acb0214185 156 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 39 2.1E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01680 6d117f3106f9b898599292acb0214185 156 Gene3D G3DSA:3.30.700.10 33 151 2.7E-37 T 11-10-2018 TVD_01680 6d117f3106f9b898599292acb0214185 156 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 18 152 2.0E-55 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 TVD_01680 6d117f3106f9b898599292acb0214185 156 Pfam PF08334 Type II secretion system (T2SS), protein G 42 151 9.6E-40 T 11-10-2018 IPR013545 Type II secretion system protein G TVD_01680 6d117f3106f9b898599292acb0214185 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 18 38 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01680 6d117f3106f9b898599292acb0214185 156 SUPERFAMILY SSF54523 46 151 1.15E-36 T 11-10-2018 TVD_06475 727ca057a0f604f3af2e217415e7f43a 358 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 8 346 39.381 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 TVD_06475 727ca057a0f604f3af2e217415e7f43a 358 SUPERFAMILY SSF100950 7 340 1.31E-110 T 11-10-2018 IPR037171 NagB/RpiA transferase-like TVD_06475 727ca057a0f604f3af2e217415e7f43a 358 Gene3D G3DSA:3.40.50.10470 186 342 6.2E-49 T 11-10-2018 TVD_06475 727ca057a0f604f3af2e217415e7f43a 358 Pfam PF01008 Initiation factor 2 subunit family 51 335 4.6E-71 T 11-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 TVD_06475 727ca057a0f604f3af2e217415e7f43a 358 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 11 335 1.0E-134 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 TVD_06475 727ca057a0f604f3af2e217415e7f43a 358 Gene3D G3DSA:1.20.120.1840 8 185 6.3E-55 T 11-10-2018 TVD_06475 727ca057a0f604f3af2e217415e7f43a 358 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 41 335 2.1E-108 T 11-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 TVD_07570 d57429910bee4a9692d2110ecbdffba6 651 SMART SM00487 24 222 9.4E-61 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_07570 d57429910bee4a9692d2110ecbdffba6 651 Pfam PF03880 DbpA RNA binding domain 485 554 3.7E-18 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain TVD_07570 d57429910bee4a9692d2110ecbdffba6 651 Gene3D G3DSA:3.40.50.300 1 211 9.2E-77 T 11-10-2018 TVD_07570 d57429910bee4a9692d2110ecbdffba6 651 Gene3D G3DSA:3.40.50.300 214 419 2.1E-48 T 11-10-2018 TVD_07570 d57429910bee4a9692d2110ecbdffba6 651 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site TVD_07570 d57429910bee4a9692d2110ecbdffba6 651 Pfam PF00271 Helicase conserved C-terminal domain 231 340 1.2E-26 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_07570 d57429910bee4a9692d2110ecbdffba6 651 SUPERFAMILY SSF52540 74 361 1.46E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_07570 d57429910bee4a9692d2110ecbdffba6 651 Pfam PF00270 DEAD/DEAH box helicase 29 193 6.8E-50 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TVD_07570 d57429910bee4a9692d2110ecbdffba6 651 Gene3D G3DSA:3.30.70.330 484 557 6.6E-11 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily TVD_07570 d57429910bee4a9692d2110ecbdffba6 651 SMART SM00490 259 340 2.1E-30 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_02420 71b3a476edfac1a2f869c0f58611231b 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02420 71b3a476edfac1a2f869c0f58611231b 179 PIRSF PIRSF002161 1 179 2.3E-64 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02420 71b3a476edfac1a2f869c0f58611231b 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 5.3E-42 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02420 71b3a476edfac1a2f869c0f58611231b 179 Gene3D G3DSA:3.30.1440.10 1 179 1.3E-77 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02420 71b3a476edfac1a2f869c0f58611231b 179 SUPERFAMILY SSF55282 3 178 6.83E-76 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02420 71b3a476edfac1a2f869c0f58611231b 179 Pfam PF00281 Ribosomal protein L5 24 80 3.9E-27 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02420 71b3a476edfac1a2f869c0f58611231b 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.88 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_12065 002654c531deff2502cfd632d83813f5 364 Pfam PF01926 50S ribosome-binding GTPase 5 126 1.6E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_12065 002654c531deff2502cfd632d83813f5 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 2.7E-152 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TVD_12065 002654c531deff2502cfd632d83813f5 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 364 44.669 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TVD_12065 002654c531deff2502cfd632d83813f5 364 SUPERFAMILY SSF52540 3 302 4.97E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_12065 002654c531deff2502cfd632d83813f5 364 Gene3D G3DSA:3.10.20.30 48 362 4.4E-152 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TVD_12065 002654c531deff2502cfd632d83813f5 364 Gene3D G3DSA:1.10.150.300 113 200 4.4E-152 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 TVD_12065 002654c531deff2502cfd632d83813f5 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 3.4E-38 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 TVD_12065 002654c531deff2502cfd632d83813f5 364 PIRSF PIRSF006641 1 364 1.8E-153 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 TVD_12065 002654c531deff2502cfd632d83813f5 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 5.2E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_12065 002654c531deff2502cfd632d83813f5 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.2E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_12065 002654c531deff2502cfd632d83813f5 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 5.2E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_12065 002654c531deff2502cfd632d83813f5 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 5.2E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_12065 002654c531deff2502cfd632d83813f5 364 Gene3D G3DSA:3.40.50.300 3 279 4.4E-152 T 11-10-2018 TVD_12065 002654c531deff2502cfd632d83813f5 364 SUPERFAMILY SSF81271 280 361 1.42E-35 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TVD_07545 3cbf60c3e31679654d1055ee9f573e9b 359 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 271 348 4.3E-5 T 11-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 TVD_07545 3cbf60c3e31679654d1055ee9f573e9b 359 SUPERFAMILY SSF82649 270 333 2.62E-5 T 11-10-2018 TVD_07545 3cbf60c3e31679654d1055ee9f573e9b 359 Gene3D G3DSA:3.30.390.50 260 351 5.4E-19 T 11-10-2018 TVD_07545 3cbf60c3e31679654d1055ee9f573e9b 359 Gene3D G3DSA:3.30.930.10 1 247 3.5E-44 T 11-10-2018 TVD_07545 3cbf60c3e31679654d1055ee9f573e9b 359 SUPERFAMILY SSF55681 2 249 4.55E-53 T 11-10-2018 TVD_08275 80c9587dcaeea5e721fbd22163de8590 211 SUPERFAMILY SSF56925 30 211 2.09E-18 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TVD_08275 80c9587dcaeea5e721fbd22163de8590 211 Pfam PF13505 Outer membrane protein beta-barrel domain 16 211 3.3E-23 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel TVD_08275 80c9587dcaeea5e721fbd22163de8590 211 Gene3D G3DSA:2.40.160.20 71 211 5.7E-6 T 11-10-2018 TVD_00950 8d6ac57aeeab968d4b1c098328c47bd4 467 SMART SM00044 244 442 2.3E-21 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TVD_00950 8d6ac57aeeab968d4b1c098328c47bd4 467 SUPERFAMILY SSF158472 195 244 9.94E-5 T 11-10-2018 TVD_00950 8d6ac57aeeab968d4b1c098328c47bd4 467 SUPERFAMILY SSF55073 274 461 3.3E-52 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_00950 8d6ac57aeeab968d4b1c098328c47bd4 467 Gene3D G3DSA:1.20.1480.50 158 254 7.5E-7 T 11-10-2018 TVD_00950 8d6ac57aeeab968d4b1c098328c47bd4 467 Pfam PF00672 HAMP domain 194 243 2.0E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_00950 8d6ac57aeeab968d4b1c098328c47bd4 467 Gene3D G3DSA:3.30.70.1230 269 467 4.2E-58 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_00950 8d6ac57aeeab968d4b1c098328c47bd4 467 SMART SM00304 194 248 3.4E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_00950 8d6ac57aeeab968d4b1c098328c47bd4 467 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 282 451 2.7E-33 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TVD_00985 b793fbca5451d9b57d4059448ba80445 135 Pfam PF03748 Flagellar basal body-associated protein FliL 35 135 6.6E-21 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 TVD_00475 4caa2a92f990057a298b13166b708591 331 SUPERFAMILY SSF88713 26 272 4.73E-16 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TVD_00475 4caa2a92f990057a298b13166b708591 331 Gene3D G3DSA:3.20.20.370 1 299 7.9E-23 T 11-10-2018 TVD_10205 fd7f3e8bb5ff1956d3254876964298f5 462 SUPERFAMILY SSF111283 29 461 4.97E-122 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 TVD_10205 fd7f3e8bb5ff1956d3254876964298f5 462 Pfam PF01523 Putative modulator of DNA gyrase 48 339 7.1E-57 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 TVD_10205 fd7f3e8bb5ff1956d3254876964298f5 462 Gene3D G3DSA:3.30.2290.10 18 248 6.0E-84 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal TVD_09775 3052dab82b082327a8a9d2c9dd6e7de9 146 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 45 118 1.1E-35 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 TVD_09775 3052dab82b082327a8a9d2c9dd6e7de9 146 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 68 118 9.0E-20 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 TVD_09775 3052dab82b082327a8a9d2c9dd6e7de9 146 Gene3D G3DSA:3.10.20.400 17 109 3.5E-41 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 TVD_09775 3052dab82b082327a8a9d2c9dd6e7de9 146 SUPERFAMILY SSF141734 19 131 1.57E-49 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 TVD_09775 3052dab82b082327a8a9d2c9dd6e7de9 146 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 19 122 31.687 T 11-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Pfam PF04563 RNA polymerase beta subunit 26 506 3.9E-42 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Gene3D G3DSA:3.90.1100.10 19 162 1.7E-49 T 11-10-2018 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Gene3D G3DSA:3.90.1110.10 163 297 6.4E-25 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Gene3D G3DSA:2.40.270.10 1041 1259 1.5E-88 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Pfam PF00562 RNA polymerase Rpb2, domain 6 724 1281 7.5E-163 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Pfam PF04560 RNA polymerase Rpb2, domain 7 1283 1357 5.9E-26 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Pfam PF10385 RNA polymerase beta subunit external 1 domain 598 663 2.9E-26 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Pfam PF04565 RNA polymerase Rpb2, domain 3 520 587 1.5E-30 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Gene3D G3DSA:3.90.1110.10 324 445 3.4E-36 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1356 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1083 1095 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Gene3D G3DSA:2.40.50.150 840 958 2.2E-45 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Gene3D G3DSA:3.90.1100.10 652 720 5.8E-20 T 11-10-2018 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Pfam PF04561 RNA polymerase Rpb2, domain 2 157 230 2.8E-7 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Pfam PF04561 RNA polymerase Rpb2, domain 2 364 461 3.9E-15 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 SUPERFAMILY SSF64484 12 1358 0.0 T 11-10-2018 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Gene3D G3DSA:3.90.1100.10 446 634 1.8E-71 T 11-10-2018 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Gene3D G3DSA:2.40.270.10 797 839 1.1E-7 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1359 12.377 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Gene3D G3DSA:2.40.50.100 721 795 1.8E-28 T 11-10-2018 TVD_02325 d20768fc0c2ec2ef273438f830048cda 1359 Gene3D G3DSA:3.90.1800.10 1269 1322 5.3E-10 T 11-10-2018 TVD_10515 f66e6dfe09499360ca916911cf966969 527 SUPERFAMILY SSF52540 288 516 1.1E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10515 f66e6dfe09499360ca916911cf966969 527 SUPERFAMILY SSF48334 21 285 6.02E-10 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily TVD_10515 f66e6dfe09499360ca916911cf966969 527 SMART SM00533 8 310 9.4E-5 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TVD_10515 f66e6dfe09499360ca916911cf966969 527 SMART SM00534 330 515 2.6E-56 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TVD_10515 f66e6dfe09499360ca916911cf966969 527 Pfam PF00488 MutS domain V 334 517 2.7E-34 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TVD_10515 f66e6dfe09499360ca916911cf966969 527 Gene3D G3DSA:3.40.50.300 289 527 7.9E-67 T 11-10-2018 TVD_11920 e99f4a4e2c2c1bf3bde619e59d410699 124 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 1.2E-19 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 TVD_11920 e99f4a4e2c2c1bf3bde619e59d410699 124 SUPERFAMILY SSF89360 16 110 5.49E-31 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 TVD_11920 e99f4a4e2c2c1bf3bde619e59d410699 124 Gene3D G3DSA:2.60.300.12 19 124 8.3E-34 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 TVD_11920 e99f4a4e2c2c1bf3bde619e59d410699 124 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 105 122 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 TVD_11920 e99f4a4e2c2c1bf3bde619e59d410699 124 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 5 124 37.287 T 11-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 TVD_11920 e99f4a4e2c2c1bf3bde619e59d410699 124 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 20 124 4.6E-38 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 SMART SM00437 252 523 1.1E-115 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 Pfam PF13368 Topoisomerase C-terminal repeat 592 652 1.4E-12 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 Pfam PF13368 Topoisomerase C-terminal repeat 715 763 1.4E-17 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 Pfam PF13368 Topoisomerase C-terminal repeat 655 704 6.3E-18 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 Gene3D G3DSA:1.10.460.10 139 563 3.0E-174 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 673 53.383 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 616 2.5E-236 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 SUPERFAMILY SSF56712 3 597 7.85E-191 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 Gene3D G3DSA:2.70.20.10 188 470 3.0E-174 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 Gene3D G3DSA:1.10.290.10 260 395 3.0E-174 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 SMART SM00493 3 103 1.5E-29 T 11-10-2018 IPR006171 TOPRIM domain TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 311 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 380 396 6.5E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 6.5E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 302 311 6.5E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 486 500 6.5E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 6.5E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 SMART SM00436 108 196 1.1E-47 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 Pfam PF01131 DNA topoisomerase 133 560 2.3E-132 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 Gene3D G3DSA:3.40.50.140 1 138 2.9E-49 T 11-10-2018 TVD_01260 5cb043ef27e884f8fe173d81df8f574a 856 Pfam PF01751 Toprim domain 5 117 1.8E-26 T 11-10-2018 IPR006171 TOPRIM domain TVD_07565 52dffde6670fbce8407bdc149041e1af 336 Gene3D G3DSA:2.60.40.420 15 308 3.6E-31 T 11-10-2018 IPR008972 Cupredoxin TVD_07565 52dffde6670fbce8407bdc149041e1af 336 SUPERFAMILY SSF49503 3 144 4.89E-12 T 11-10-2018 IPR008972 Cupredoxin TVD_07565 52dffde6670fbce8407bdc149041e1af 336 Pfam PF07732 Multicopper oxidase 58 139 5.6E-8 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 TVD_07565 52dffde6670fbce8407bdc149041e1af 336 SUPERFAMILY SSF49503 108 304 9.36E-8 T 11-10-2018 IPR008972 Cupredoxin TVD_04760 4ba33b23b881730ac02c70c5c7032ffb 254 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 76 109 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TVD_04760 4ba33b23b881730ac02c70c5c7032ffb 254 Gene3D G3DSA:3.40.1010.10 1 110 4.7E-28 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TVD_04760 4ba33b23b881730ac02c70c5c7032ffb 254 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 249 1.3E-94 T 11-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 TVD_04760 4ba33b23b881730ac02c70c5c7032ffb 254 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 207 3.2E-44 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TVD_04760 4ba33b23b881730ac02c70c5c7032ffb 254 SUPERFAMILY SSF53790 2 248 1.13E-63 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TVD_04760 4ba33b23b881730ac02c70c5c7032ffb 254 Gene3D G3DSA:3.30.950.10 111 231 4.8E-43 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TVD_04760 4ba33b23b881730ac02c70c5c7032ffb 254 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TVD_00485 f537767fd9df83163dca365efb264ac1 384 Gene3D G3DSA:3.40.50.2000 1 199 2.9E-73 T 11-10-2018 TVD_00485 f537767fd9df83163dca365efb264ac1 384 SUPERFAMILY SSF53756 8 376 1.19E-109 T 11-10-2018 TVD_00485 f537767fd9df83163dca365efb264ac1 384 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 9 370 4.6E-91 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 TVD_00485 f537767fd9df83163dca365efb264ac1 384 Gene3D G3DSA:3.40.50.2000 203 353 2.4E-50 T 11-10-2018 TVD_00485 f537767fd9df83163dca365efb264ac1 384 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 33 370 9.3E-107 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 TVD_09745 8e5fe8a02bfe9f084cec8bca833bce5b 358 Gene3D G3DSA:3.40.50.300 5 199 3.2E-50 T 11-10-2018 TVD_09745 8e5fe8a02bfe9f084cec8bca833bce5b 358 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 179 8.5E-43 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TVD_09745 8e5fe8a02bfe9f084cec8bca833bce5b 358 SUPERFAMILY SSF52540 6 176 1.31E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_13290 68dea2802622fc899b245e60cc03deac 449 SUPERFAMILY SSF51735 205 447 2.02E-75 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_13290 68dea2802622fc899b245e60cc03deac 449 Gene3D G3DSA:1.10.285.10 10 384 5.6E-161 T 11-10-2018 TVD_13290 68dea2802622fc899b245e60cc03deac 449 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 124 137 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_13290 68dea2802622fc899b245e60cc03deac 449 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 59 187 7.6E-49 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_13290 68dea2802622fc899b245e60cc03deac 449 Gene3D G3DSA:1.10.285.10 385 449 2.1E-5 T 11-10-2018 TVD_13290 68dea2802622fc899b245e60cc03deac 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 373 384 3.8E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_13290 68dea2802622fc899b245e60cc03deac 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 196 218 3.8E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_13290 68dea2802622fc899b245e60cc03deac 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 238 258 3.8E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_13290 68dea2802622fc899b245e60cc03deac 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 116 130 3.8E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_13290 68dea2802622fc899b245e60cc03deac 449 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 205 447 1.2E-86 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_13290 68dea2802622fc899b245e60cc03deac 449 Gene3D G3DSA:3.40.50.720 212 374 5.6E-161 T 11-10-2018 TVD_13290 68dea2802622fc899b245e60cc03deac 449 PIRSF PIRSF000185 27 449 1.9E-117 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 TVD_13290 68dea2802622fc899b245e60cc03deac 449 SUPERFAMILY SSF53223 10 199 1.73E-70 T 11-10-2018 TVD_13290 68dea2802622fc899b245e60cc03deac 449 SMART SM00839 207 447 2.1E-87 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_13290 68dea2802622fc899b245e60cc03deac 449 Gene3D G3DSA:3.40.50.10860 57 192 5.6E-161 T 11-10-2018 TVD_00300 22050c9a23cd3745b94ea1c029dcaafc 190 Pfam PF07238 PilZ domain 108 187 3.3E-5 T 11-10-2018 IPR009875 PilZ domain GO:0035438 TVD_00300 22050c9a23cd3745b94ea1c029dcaafc 190 SUPERFAMILY SSF141371 105 187 1.1E-9 T 11-10-2018 TVD_12390 c24101162b148942d9df244050d31c99 259 Gene3D G3DSA:3.60.21.10 1 256 1.6E-62 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TVD_12390 c24101162b148942d9df244050d31c99 259 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 195 247 7.0E-12 T 11-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 TVD_12390 c24101162b148942d9df244050d31c99 259 Pfam PF00149 Calcineurin-like phosphoesterase 3 196 2.3E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TVD_12390 c24101162b148942d9df244050d31c99 259 SUPERFAMILY SSF56300 4 250 2.22E-50 T 11-10-2018 TVD_12390 c24101162b148942d9df244050d31c99 259 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 2 250 33.627 T 11-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 TVD_13635 f8bbde40c4f0045693bddb0877c3dddd 444 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 337 409 2.4E-6 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TVD_13635 f8bbde40c4f0045693bddb0877c3dddd 444 Pfam PF07724 AAA domain (Cdc48 subfamily) 189 331 5.7E-38 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_13635 f8bbde40c4f0045693bddb0877c3dddd 444 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 107 3.8E-7 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_13635 f8bbde40c4f0045693bddb0877c3dddd 444 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 444 42.661 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 TVD_13635 f8bbde40c4f0045693bddb0877c3dddd 444 SUPERFAMILY SSF52540 4 442 1.19E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_13635 f8bbde40c4f0045693bddb0877c3dddd 444 SMART SM00382 49 334 1.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_13635 f8bbde40c4f0045693bddb0877c3dddd 444 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 444 9.5E-205 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 TVD_13635 f8bbde40c4f0045693bddb0877c3dddd 444 Gene3D G3DSA:1.10.8.60 337 441 2.9E-35 T 11-10-2018 TVD_13635 f8bbde40c4f0045693bddb0877c3dddd 444 SMART SM01086 337 435 6.8E-19 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TVD_01545 c7b0bc504d6537731850bfac7f893109 90 Pfam PF07238 PilZ domain 6 86 1.6E-5 T 11-10-2018 IPR009875 PilZ domain GO:0035438 TVD_02310 7756027431dd538e5851f5bea77e166f 231 PIRSF PIRSF002155 1 227 1.4E-76 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02310 7756027431dd538e5851f5bea77e166f 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.569 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 TVD_02310 7756027431dd538e5851f5bea77e166f 231 SUPERFAMILY SSF56808 6 225 3.92E-81 T 11-10-2018 IPR023674 Ribosomal protein L1-like TVD_02310 7756027431dd538e5851f5bea77e166f 231 Gene3D G3DSA:3.40.50.790 68 159 2.3E-78 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich TVD_02310 7756027431dd538e5851f5bea77e166f 231 Pfam PF00687 Ribosomal protein L1p/L10e family 33 220 5.5E-51 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein TVD_02310 7756027431dd538e5851f5bea77e166f 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02310 7756027431dd538e5851f5bea77e166f 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 3.4E-103 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 TVD_02310 7756027431dd538e5851f5bea77e166f 231 Gene3D G3DSA:3.30.190.20 21 225 2.3E-78 T 11-10-2018 TVD_09570 2852a42504a8d7a0f2588e189b535f8f 109 Pfam PF08850 Domain of unknown function (DUF1820) 7 101 2.0E-39 T 11-10-2018 IPR014949 Protein of unknown function DUF1820 TVD_09570 2852a42504a8d7a0f2588e189b535f8f 109 PIRSF PIRSF028538 1 109 9.2E-42 T 11-10-2018 IPR014949 Protein of unknown function DUF1820 TVD_01520 98da22ebdb007511426139142da9ba3d 246 Gene3D G3DSA:3.40.50.80 96 246 3.0E-43 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_01520 98da22ebdb007511426139142da9ba3d 246 SUPERFAMILY SSF63380 1 97 1.56E-23 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TVD_01520 98da22ebdb007511426139142da9ba3d 246 Gene3D G3DSA:2.40.30.10 1 95 1.5E-27 T 11-10-2018 TVD_01520 98da22ebdb007511426139142da9ba3d 246 Pfam PF00970 Oxidoreductase FAD-binding domain 17 89 4.8E-6 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 TVD_01520 98da22ebdb007511426139142da9ba3d 246 Pfam PF00175 Oxidoreductase NAD-binding domain 110 220 3.5E-14 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TVD_01520 98da22ebdb007511426139142da9ba3d 246 SUPERFAMILY SSF52343 101 246 3.27E-36 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_03725 e6808d604f9c76db54c2fb8e1aedf605 198 Gene3D G3DSA:3.40.50.1240 31 186 1.6E-22 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TVD_03725 e6808d604f9c76db54c2fb8e1aedf605 198 SUPERFAMILY SSF53254 42 185 1.09E-14 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TVD_03725 e6808d604f9c76db54c2fb8e1aedf605 198 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 42 111 4.8E-6 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TVD_04585 1acd9ef4a27ccbf770ae2698a57fb204 231 Pfam PF04205 FMN-binding domain 104 193 2.1E-16 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TVD_04585 1acd9ef4a27ccbf770ae2698a57fb204 231 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 15 197 2.8E-52 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 TVD_04585 1acd9ef4a27ccbf770ae2698a57fb204 231 PIRSF PIRSF006091 3 210 2.0E-65 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 TVD_04585 1acd9ef4a27ccbf770ae2698a57fb204 231 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 6 198 23.285 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 TVD_04585 1acd9ef4a27ccbf770ae2698a57fb204 231 SMART SM00900 104 196 9.1E-33 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 TVD_13655 782cdd072c16560d3287294b119e6feb 278 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 278 38.086 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 TVD_13655 782cdd072c16560d3287294b119e6feb 278 Gene3D G3DSA:3.10.310.10 5 274 6.7E-98 T 11-10-2018 TVD_13655 782cdd072c16560d3287294b119e6feb 278 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 67 81 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 TVD_13655 782cdd072c16560d3287294b119e6feb 278 Gene3D G3DSA:3.10.310.10 118 265 6.7E-98 T 11-10-2018 TVD_13655 782cdd072c16560d3287294b119e6feb 278 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 275 5.0E-86 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 TVD_13655 782cdd072c16560d3287294b119e6feb 278 SUPERFAMILY SSF54506 2 278 7.39E-54 T 11-10-2018 TVD_13655 782cdd072c16560d3287294b119e6feb 278 Pfam PF01678 Diaminopimelate epimerase 5 126 5.5E-34 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 TVD_13655 782cdd072c16560d3287294b119e6feb 278 Pfam PF01678 Diaminopimelate epimerase 155 270 1.1E-25 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 TVD_00305 1fd2658270ec5cbc2cc371da5f3fc3e2 506 Pfam PF02706 Chain length determinant protein 13 94 6.2E-8 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 TVD_00305 1fd2658270ec5cbc2cc371da5f3fc3e2 506 TIGRFAM TIGR03007 pepcterm_ChnLen: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily 7 487 3.2E-145 T 11-10-2018 IPR014345 PEP-CTERM locus polysaccharide chain length determinant TVD_00305 1fd2658270ec5cbc2cc371da5f3fc3e2 506 SUPERFAMILY SSF57997 163 287 1.7E-5 T 11-10-2018 TVD_01115 f4fbb6d10b847b0f90b7460857aa8181 727 TIGRFAM TIGR02471 sucr_syn_bact_C: sucrose-phosphate synthase, sucrose phosphatase-like domain 479 712 1.6E-90 T 11-10-2018 IPR012821 Sucrose phosphate synthase, sucrose phosphatase-like domain TVD_01115 f4fbb6d10b847b0f90b7460857aa8181 727 Pfam PF13439 Glycosyltransferase Family 4 39 235 1.0E-15 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TVD_01115 f4fbb6d10b847b0f90b7460857aa8181 727 Gene3D G3DSA:3.40.50.2000 231 439 1.6E-138 T 11-10-2018 TVD_01115 f4fbb6d10b847b0f90b7460857aa8181 727 TIGRFAM TIGR02472 sucr_P_syn_N: sucrose-phosphate synthase, putative, glycosyltransferase domain 14 451 2.2E-201 T 11-10-2018 IPR012822 Sucrose-phosphate synthase, glycosyltransferase domain TVD_01115 f4fbb6d10b847b0f90b7460857aa8181 727 SUPERFAMILY SSF56784 476 684 5.89E-31 T 11-10-2018 IPR036412 HAD-like superfamily TVD_01115 f4fbb6d10b847b0f90b7460857aa8181 727 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 477 713 3.0E-80 T 11-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal TVD_01115 f4fbb6d10b847b0f90b7460857aa8181 727 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 479 669 5.0E-21 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 TVD_01115 f4fbb6d10b847b0f90b7460857aa8181 727 Gene3D G3DSA:3.90.1070.10 564 633 4.3E-71 T 11-10-2018 TVD_01115 f4fbb6d10b847b0f90b7460857aa8181 727 Gene3D G3DSA:3.40.50.2000 36 445 1.6E-138 T 11-10-2018 TVD_01115 f4fbb6d10b847b0f90b7460857aa8181 727 Pfam PF00534 Glycosyl transferases group 1 258 430 4.5E-23 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TVD_01115 f4fbb6d10b847b0f90b7460857aa8181 727 SUPERFAMILY SSF53756 32 453 9.03E-70 T 11-10-2018 TVD_01115 f4fbb6d10b847b0f90b7460857aa8181 727 Gene3D G3DSA:3.40.50.1000 479 710 4.3E-71 T 11-10-2018 IPR023214 HAD superfamily TVD_09825 37e9e46513b7e4b73ec61e0a00b5a565 150 Pfam PF17228 Sulphur globule protein 52 141 7.2E-10 T 11-10-2018 IPR035173 Sulphur globule protein TVD_10020 a0240c3db2fa0fa2203f9a794c86c76e 594 Gene3D G3DSA:2.40.50.140 1 106 1.6E-35 T 11-10-2018 TVD_10020 a0240c3db2fa0fa2203f9a794c86c76e 594 Gene3D G3DSA:3.30.1360.30 273 422 1.0E-196 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 TVD_10020 a0240c3db2fa0fa2203f9a794c86c76e 594 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 560 6.7E-111 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_10020 a0240c3db2fa0fa2203f9a794c86c76e 594 SUPERFAMILY SSF50249 1 105 4.19E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_10020 a0240c3db2fa0fa2203f9a794c86c76e 594 Gene3D G3DSA:3.30.930.10 117 584 1.0E-196 T 11-10-2018 TVD_10020 a0240c3db2fa0fa2203f9a794c86c76e 594 Pfam PF01336 OB-fold nucleic acid binding domain 18 100 3.1E-18 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TVD_10020 a0240c3db2fa0fa2203f9a794c86c76e 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 520 534 9.9E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_10020 a0240c3db2fa0fa2203f9a794c86c76e 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 476 492 9.9E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_10020 a0240c3db2fa0fa2203f9a794c86c76e 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 9.9E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_10020 a0240c3db2fa0fa2203f9a794c86c76e 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 9.9E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_10020 a0240c3db2fa0fa2203f9a794c86c76e 594 SUPERFAMILY SSF55261 291 422 2.05E-42 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 TVD_10020 a0240c3db2fa0fa2203f9a794c86c76e 594 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 586 34.354 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 TVD_10020 a0240c3db2fa0fa2203f9a794c86c76e 594 SUPERFAMILY SSF55681 108 586 1.65E-110 T 11-10-2018 TVD_10020 a0240c3db2fa0fa2203f9a794c86c76e 594 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 1.3E-246 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 TVD_10020 a0240c3db2fa0fa2203f9a794c86c76e 594 Pfam PF02938 GAD domain 309 407 3.6E-28 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 TVD_01600 b33af2e0fc9b4a8d2b31fa7d19cbe70c 406 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 8.9E-12 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain TVD_01600 b33af2e0fc9b4a8d2b31fa7d19cbe70c 406 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 86 5.0E-9 T 11-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger TVD_01600 b33af2e0fc9b4a8d2b31fa7d19cbe70c 406 Pfam PF01610 Transposase 157 397 2.6E-64 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain TVD_08780 b33af2e0fc9b4a8d2b31fa7d19cbe70c 406 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 8.9E-12 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain TVD_08780 b33af2e0fc9b4a8d2b31fa7d19cbe70c 406 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 86 5.0E-9 T 11-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger TVD_08780 b33af2e0fc9b4a8d2b31fa7d19cbe70c 406 Pfam PF01610 Transposase 157 397 2.6E-64 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain TVD_05280 baf14d7f7459ef85670cc33f3101b637 703 SUPERFAMILY SSF52540 19 407 1.74E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_05280 baf14d7f7459ef85670cc33f3101b637 703 Gene3D G3DSA:1.10.10.1020 15 140 6.0E-16 T 11-10-2018 TVD_05280 baf14d7f7459ef85670cc33f3101b637 703 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 29 697 45.901 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 TVD_05280 baf14d7f7459ef85670cc33f3101b637 703 SMART SM00382 202 405 0.0078 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_05280 baf14d7f7459ef85670cc33f3101b637 703 Pfam PF13538 UvrD-like helicase C-terminal domain 627 672 1.9E-15 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain TVD_05280 baf14d7f7459ef85670cc33f3101b637 703 SUPERFAMILY SSF52540 327 690 3.19E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_05280 baf14d7f7459ef85670cc33f3101b637 703 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 20 696 3.6E-156 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 TVD_05280 baf14d7f7459ef85670cc33f3101b637 703 Gene3D G3DSA:3.40.50.300 141 402 1.8E-65 T 11-10-2018 TVD_05280 baf14d7f7459ef85670cc33f3101b637 703 Gene3D G3DSA:3.40.50.300 412 541 5.1E-15 T 11-10-2018 TVD_05280 baf14d7f7459ef85670cc33f3101b637 703 Gene3D G3DSA:3.40.50.300 548 686 3.5E-21 T 11-10-2018 TVD_05280 baf14d7f7459ef85670cc33f3101b637 703 Pfam PF13604 AAA domain 193 365 1.5E-29 T 11-10-2018 TVD_11610 97a5152f719b939f2df1b288146102b4 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.9E-22 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 TVD_11610 97a5152f719b939f2df1b288146102b4 187 SMART SM00841 131 186 1.1E-31 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 TVD_11610 97a5152f719b939f2df1b288146102b4 187 SMART SM01185 69 123 2.7E-26 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 TVD_11610 97a5152f719b939f2df1b288146102b4 187 SUPERFAMILY SSF50249 69 128 1.33E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_11610 97a5152f719b939f2df1b288146102b4 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 3.7E-25 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like TVD_11610 97a5152f719b939f2df1b288146102b4 187 Gene3D G3DSA:2.40.50.140 130 187 3.9E-27 T 11-10-2018 TVD_11610 97a5152f719b939f2df1b288146102b4 187 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site TVD_11610 97a5152f719b939f2df1b288146102b4 187 SUPERFAMILY SSF50104 2 63 6.52E-20 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily TVD_11610 97a5152f719b939f2df1b288146102b4 187 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.232 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 TVD_11610 97a5152f719b939f2df1b288146102b4 187 SUPERFAMILY SSF50249 132 187 2.78E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_11610 97a5152f719b939f2df1b288146102b4 187 PIRSF PIRSF005901 2 187 2.4E-65 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP TVD_11610 97a5152f719b939f2df1b288146102b4 187 Gene3D G3DSA:2.30.30.30 1 65 5.9E-27 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 TVD_11610 97a5152f719b939f2df1b288146102b4 187 Gene3D G3DSA:2.40.50.140 66 127 5.1E-29 T 11-10-2018 TVD_11610 97a5152f719b939f2df1b288146102b4 187 Pfam PF09285 Elongation factor P, C-terminal 132 186 1.0E-25 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 TVD_11610 97a5152f719b939f2df1b288146102b4 187 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 2.0E-76 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 TVD_03855 45266b5fe42a4096e98c88e5ec0d86ee 497 SUPERFAMILY SSF49503 401 493 9.05E-18 T 11-10-2018 IPR008972 Cupredoxin TVD_03855 45266b5fe42a4096e98c88e5ec0d86ee 497 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 411 493 3.9E-11 T 11-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 TVD_03855 45266b5fe42a4096e98c88e5ec0d86ee 497 PRINTS PR00695 Copper containing nitrite reductase signature 103 119 4.4E-12 T 11-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 TVD_03855 45266b5fe42a4096e98c88e5ec0d86ee 497 PRINTS PR00695 Copper containing nitrite reductase signature 160 175 4.4E-12 T 11-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 TVD_03855 45266b5fe42a4096e98c88e5ec0d86ee 497 PRINTS PR00695 Copper containing nitrite reductase signature 179 195 4.4E-12 T 11-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 TVD_03855 45266b5fe42a4096e98c88e5ec0d86ee 497 Gene3D G3DSA:2.60.40.420 210 353 4.0E-29 T 11-10-2018 IPR008972 Cupredoxin TVD_03855 45266b5fe42a4096e98c88e5ec0d86ee 497 SUPERFAMILY SSF49503 67 198 7.07E-28 T 11-10-2018 IPR008972 Cupredoxin TVD_03855 45266b5fe42a4096e98c88e5ec0d86ee 497 SUPERFAMILY SSF49503 212 346 1.79E-21 T 11-10-2018 IPR008972 Cupredoxin TVD_03855 45266b5fe42a4096e98c88e5ec0d86ee 497 Gene3D G3DSA:2.60.40.420 61 196 4.2E-27 T 11-10-2018 IPR008972 Cupredoxin TVD_03855 45266b5fe42a4096e98c88e5ec0d86ee 497 Gene3D G3DSA:2.60.40.420 397 493 2.4E-21 T 11-10-2018 IPR008972 Cupredoxin TVD_03855 45266b5fe42a4096e98c88e5ec0d86ee 497 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 475 487 - T 11-10-2018 IPR028871 Blue (type 1) copper protein, binding site TVD_03855 45266b5fe42a4096e98c88e5ec0d86ee 497 Pfam PF07732 Multicopper oxidase 98 198 9.9E-10 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 TVD_10385 b41f36803ea4f4f8c967e3a638ac3ece 184 Gene3D G3DSA:3.30.1330.60 62 182 2.6E-39 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_10385 b41f36803ea4f4f8c967e3a638ac3ece 184 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 3 180 29.914 T 11-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 TVD_10385 b41f36803ea4f4f8c967e3a638ac3ece 184 Pfam PF00691 OmpA family 79 174 2.4E-18 T 11-10-2018 IPR006665 OmpA-like domain TVD_10385 b41f36803ea4f4f8c967e3a638ac3ece 184 PRINTS PR01021 OMPA domain signature 80 102 2.8E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TVD_10385 b41f36803ea4f4f8c967e3a638ac3ece 184 PRINTS PR01021 OMPA domain signature 125 141 2.8E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TVD_10385 b41f36803ea4f4f8c967e3a638ac3ece 184 PRINTS PR01021 OMPA domain signature 110 125 2.8E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TVD_10385 b41f36803ea4f4f8c967e3a638ac3ece 184 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 78 180 5.0E-43 T 11-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 TVD_10385 b41f36803ea4f4f8c967e3a638ac3ece 184 SUPERFAMILY SSF103088 74 179 9.68E-34 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_01475 eb7a24997e03c98efc56e2e8740fe688 179 Pfam PF00578 AhpC/TSA family 48 158 7.2E-17 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TVD_01475 eb7a24997e03c98efc56e2e8740fe688 179 Gene3D G3DSA:3.40.30.10 38 173 3.9E-29 T 11-10-2018 TVD_01475 eb7a24997e03c98efc56e2e8740fe688 179 SUPERFAMILY SSF52833 45 166 4.77E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_04070 b3774eac23d8d7e289e13ed012d187d0 111 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 16 110 22.211 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 TVD_04070 b3774eac23d8d7e289e13ed012d187d0 111 SUPERFAMILY SSF55248 18 110 3.79E-29 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 TVD_04070 b3774eac23d8d7e289e13ed012d187d0 111 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 18 108 3.8E-28 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 TVD_04070 b3774eac23d8d7e289e13ed012d187d0 111 Gene3D G3DSA:3.30.1360.20 19 111 9.6E-30 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 TVD_13245 8f1a881acbd1dcac8b4ae4c1dc9aee3a 157 SMART SM00100 13 130 1.4E-5 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TVD_13245 8f1a881acbd1dcac8b4ae4c1dc9aee3a 157 Gene3D G3DSA:2.60.120.10 5 138 1.6E-36 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TVD_13245 8f1a881acbd1dcac8b4ae4c1dc9aee3a 157 Pfam PF00027 Cyclic nucleotide-binding domain 33 116 1.0E-11 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TVD_13245 8f1a881acbd1dcac8b4ae4c1dc9aee3a 157 SUPERFAMILY SSF51206 2 130 1.96E-22 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like TVD_05185 15d2b78a4a922c1d6e44ef22bad87a7d 313 Pfam PF01548 Transposase 7 147 5.3E-21 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 TVD_05185 15d2b78a4a922c1d6e44ef22bad87a7d 313 Pfam PF02371 Transposase IS116/IS110/IS902 family 187 270 7.4E-16 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 TVD_00055 6aaa120c23e688717591aff392ec6980 282 SUPERFAMILY SSF52402 11 149 2.01E-27 T 11-10-2018 TVD_00055 6aaa120c23e688717591aff392ec6980 282 Pfam PF00582 Universal stress protein family 11 147 1.5E-24 T 11-10-2018 IPR006016 UspA TVD_00055 6aaa120c23e688717591aff392ec6980 282 Pfam PF00582 Universal stress protein family 157 280 5.7E-24 T 11-10-2018 IPR006016 UspA TVD_00055 6aaa120c23e688717591aff392ec6980 282 Gene3D G3DSA:3.40.50.620 155 281 2.9E-31 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_00055 6aaa120c23e688717591aff392ec6980 282 Gene3D G3DSA:3.40.50.620 9 148 3.4E-28 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_00055 6aaa120c23e688717591aff392ec6980 282 SUPERFAMILY SSF52402 156 280 2.6E-31 T 11-10-2018 TVD_00055 6aaa120c23e688717591aff392ec6980 282 PRINTS PR01438 Universal stress protein signature 11 29 5.3E-20 T 11-10-2018 IPR006015 Universal stress protein A TVD_00055 6aaa120c23e688717591aff392ec6980 282 PRINTS PR01438 Universal stress protein signature 258 280 5.3E-20 T 11-10-2018 IPR006015 Universal stress protein A TVD_00055 6aaa120c23e688717591aff392ec6980 282 PRINTS PR01438 Universal stress protein signature 240 252 5.3E-20 T 11-10-2018 IPR006015 Universal stress protein A TVD_09725 0116dd4394bbbac100cf8f1844558fd2 521 SMART SM00283 258 519 6.4E-80 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_09725 0116dd4394bbbac100cf8f1844558fd2 521 Gene3D G3DSA:1.10.287.950 197 520 2.5E-67 T 11-10-2018 TVD_09725 0116dd4394bbbac100cf8f1844558fd2 521 SUPERFAMILY SSF58104 239 519 7.98E-74 T 11-10-2018 TVD_09725 0116dd4394bbbac100cf8f1844558fd2 521 Pfam PF08447 PAS fold 32 113 1.6E-13 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_09725 0116dd4394bbbac100cf8f1844558fd2 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 303 486 6.6E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_09725 0116dd4394bbbac100cf8f1844558fd2 521 Gene3D G3DSA:3.30.450.20 8 143 7.2E-20 T 11-10-2018 TVD_09725 0116dd4394bbbac100cf8f1844558fd2 521 SUPERFAMILY SSF55785 18 113 8.38E-22 T 11-10-2018 IPR035965 PAS domain superfamily TVD_09725 0116dd4394bbbac100cf8f1844558fd2 521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 120 3.6E-13 T 11-10-2018 IPR000014 PAS domain TVD_06300 c81ed578f479db708f1ced8b37035a60 250 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 177 192 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TVD_06300 c81ed578f479db708f1ced8b37035a60 250 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 225 237 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TVD_06300 c81ed578f479db708f1ced8b37035a60 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 120 134 6.1E-20 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TVD_06300 c81ed578f479db708f1ced8b37035a60 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 6.1E-20 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TVD_06300 c81ed578f479db708f1ced8b37035a60 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 238 248 6.1E-20 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TVD_06300 c81ed578f479db708f1ced8b37035a60 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 48 57 6.1E-20 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TVD_06300 c81ed578f479db708f1ced8b37035a60 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 108 120 6.1E-20 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TVD_06300 c81ed578f479db708f1ced8b37035a60 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 170 182 6.1E-20 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TVD_06300 c81ed578f479db708f1ced8b37035a60 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 198 219 1.3E-64 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TVD_06300 c81ed578f479db708f1ced8b37035a60 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 1.3E-64 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TVD_06300 c81ed578f479db708f1ced8b37035a60 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 222 247 1.3E-64 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TVD_06300 c81ed578f479db708f1ced8b37035a60 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 89 108 1.3E-64 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TVD_06300 c81ed578f479db708f1ced8b37035a60 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 177 197 1.3E-64 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TVD_06300 c81ed578f479db708f1ced8b37035a60 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 69 89 1.3E-64 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TVD_06300 c81ed578f479db708f1ced8b37035a60 250 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 52 248 1.3E-82 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TVD_06300 c81ed578f479db708f1ced8b37035a60 250 Pfam PF00813 FliP family 52 244 1.2E-77 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TVD_12535 18a8e1e1e0b376e48efb6e2bf60839d6 205 SUPERFAMILY SSF53335 27 195 2.46E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_12535 18a8e1e1e0b376e48efb6e2bf60839d6 205 Pfam PF05175 Methyltransferase small domain 33 197 1.6E-34 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 TVD_12535 18a8e1e1e0b376e48efb6e2bf60839d6 205 Gene3D G3DSA:3.40.50.150 19 203 4.5E-42 T 11-10-2018 TVD_04265 7ef9f2f22a137ebf291ce9ad740299e0 130 Gene3D G3DSA:1.10.940.10 1 126 6.8E-39 T 11-10-2018 IPR035926 NusB-like superfamily TVD_04265 7ef9f2f22a137ebf291ce9ad740299e0 130 SUPERFAMILY SSF48013 1 122 3.66E-36 T 11-10-2018 IPR035926 NusB-like superfamily TVD_04265 7ef9f2f22a137ebf291ce9ad740299e0 130 Pfam PF01029 NusB family 1 117 4.9E-27 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 TVD_04265 7ef9f2f22a137ebf291ce9ad740299e0 130 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 1 119 8.0E-38 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 TVD_04265 7ef9f2f22a137ebf291ce9ad740299e0 130 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 7 122 16.455 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 TVD_10285 f7c0f2654ad37ccba45015e2fa388260 271 Gene3D G3DSA:3.20.190.10 2 124 1.8E-37 T 11-10-2018 IPR035937 MutM-like, N-terminal TVD_10285 f7c0f2654ad37ccba45015e2fa388260 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 42.962 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 TVD_10285 f7c0f2654ad37ccba45015e2fa388260 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 8.2E-34 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 TVD_10285 f7c0f2654ad37ccba45015e2fa388260 271 Pfam PF06827 Zinc finger found in FPG and IleRS 243 271 3.0E-6 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 TVD_10285 f7c0f2654ad37ccba45015e2fa388260 271 SUPERFAMILY SSF81624 2 140 1.14E-40 T 11-10-2018 IPR035937 MutM-like, N-terminal TVD_10285 f7c0f2654ad37ccba45015e2fa388260 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 4.6E-23 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 TVD_10285 f7c0f2654ad37ccba45015e2fa388260 271 SMART SM00898 2 116 4.3E-52 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 TVD_10285 f7c0f2654ad37ccba45015e2fa388260 271 SUPERFAMILY SSF57716 219 271 1.77E-15 T 11-10-2018 TVD_10285 f7c0f2654ad37ccba45015e2fa388260 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 TVD_10285 f7c0f2654ad37ccba45015e2fa388260 271 Gene3D G3DSA:1.10.8.50 133 271 1.2E-43 T 11-10-2018 TVD_10285 f7c0f2654ad37ccba45015e2fa388260 271 SUPERFAMILY SSF46946 132 224 1.77E-29 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 TVD_10285 f7c0f2654ad37ccba45015e2fa388260 271 SMART SM01232 131 223 8.9E-49 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 TVD_10285 f7c0f2654ad37ccba45015e2fa388260 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 2.2E-86 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 TVD_09975 7db7b152743e81557c53bba43ad8a5d4 442 Gene3D G3DSA:3.90.230.10 175 438 3.3E-97 T 11-10-2018 TVD_09975 7db7b152743e81557c53bba43ad8a5d4 442 Pfam PF00557 Metallopeptidase family M24 183 412 1.7E-61 T 11-10-2018 IPR000994 Peptidase M24 TVD_09975 7db7b152743e81557c53bba43ad8a5d4 442 SMART SM01011 4 138 1.7E-61 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 TVD_09975 7db7b152743e81557c53bba43ad8a5d4 442 SUPERFAMILY SSF55920 180 434 1.31E-82 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like TVD_09975 7db7b152743e81557c53bba43ad8a5d4 442 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 124 3.1E-38 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 TVD_09975 7db7b152743e81557c53bba43ad8a5d4 442 Gene3D G3DSA:3.40.350.10 5 173 4.1E-55 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TVD_09975 7db7b152743e81557c53bba43ad8a5d4 442 SUPERFAMILY SSF53092 3 176 2.17E-53 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TVD_09975 7db7b152743e81557c53bba43ad8a5d4 442 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 349 361 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site TVD_09975 7db7b152743e81557c53bba43ad8a5d4 442 PRINTS PR00599 Methionine aminopeptidase-1 signature 254 270 1.6E-5 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TVD_09975 7db7b152743e81557c53bba43ad8a5d4 442 PRINTS PR00599 Methionine aminopeptidase-1 signature 372 384 1.6E-5 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TVD_01575 718c98abbf68bafe3eec904b7d110550 418 SUPERFAMILY SSF54373 273 363 3.53E-12 T 11-10-2018 TVD_01575 718c98abbf68bafe3eec904b7d110550 418 Gene3D G3DSA:3.50.50.60 106 403 4.1E-47 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_01575 718c98abbf68bafe3eec904b7d110550 418 SUPERFAMILY SSF51905 1 415 4.53E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_01575 718c98abbf68bafe3eec904b7d110550 418 Pfam PF01266 FAD dependent oxidoreductase 2 400 6.0E-64 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TVD_01575 718c98abbf68bafe3eec904b7d110550 418 Gene3D G3DSA:3.50.50.60 1 70 6.4E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_01575 718c98abbf68bafe3eec904b7d110550 418 Gene3D G3DSA:3.30.9.10 137 364 4.1E-47 T 11-10-2018 TVD_05160 2e54645abdd0cbbbce8a2bba22ea195e 91 SUPERFAMILY SSF143120 4 53 1.83E-8 T 11-10-2018 IPR036165 YefM-like superfamily TVD_05160 2e54645abdd0cbbbce8a2bba22ea195e 91 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 51 1.2E-6 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TVD_06235 3fcad5cd9f5c0f69360d6d9831f10954 459 SMART SM00382 146 289 3.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_06235 3fcad5cd9f5c0f69360d6d9831f10954 459 SUPERFAMILY SSF52540 126 363 2.9E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06235 3fcad5cd9f5c0f69360d6d9831f10954 459 Gene3D G3DSA:3.40.50.300 120 297 4.2E-64 T 11-10-2018 TVD_06235 3fcad5cd9f5c0f69360d6d9831f10954 459 Pfam PF02954 Bacterial regulatory protein, Fis family 414 454 1.2E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_06235 3fcad5cd9f5c0f69360d6d9831f10954 459 Gene3D G3DSA:1.10.8.60 298 373 2.0E-15 T 11-10-2018 TVD_06235 3fcad5cd9f5c0f69360d6d9831f10954 459 Pfam PF00158 Sigma-54 interaction domain 126 293 6.2E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TVD_06235 3fcad5cd9f5c0f69360d6d9831f10954 459 SUPERFAMILY SSF46689 402 456 1.16E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_06235 3fcad5cd9f5c0f69360d6d9831f10954 459 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 338 347 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TVD_06235 3fcad5cd9f5c0f69360d6d9831f10954 459 Gene3D G3DSA:1.10.10.60 401 457 8.7E-13 T 11-10-2018 TVD_06235 3fcad5cd9f5c0f69360d6d9831f10954 459 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 457 5.2E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_06235 3fcad5cd9f5c0f69360d6d9831f10954 459 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 437 5.2E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_10145 8679db16eec507818ac752159a4f2cbf 352 Pfam PF02769 AIR synthase related protein, C-terminal domain 179 344 1.1E-37 T 11-10-2018 IPR010918 PurM-like, C-terminal domain TVD_10145 8679db16eec507818ac752159a4f2cbf 352 Pfam PF00586 AIR synthase related protein, N-terminal domain 57 165 1.0E-16 T 11-10-2018 IPR016188 PurM-like, N-terminal domain TVD_10145 8679db16eec507818ac752159a4f2cbf 352 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 339 7.3E-140 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TVD_10145 8679db16eec507818ac752159a4f2cbf 352 Gene3D G3DSA:3.30.1330.10 7 172 3.9E-69 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TVD_10145 8679db16eec507818ac752159a4f2cbf 352 SUPERFAMILY SSF56042 173 344 3.14E-60 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TVD_10145 8679db16eec507818ac752159a4f2cbf 352 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 349 47.244 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 TVD_10145 8679db16eec507818ac752159a4f2cbf 352 Gene3D G3DSA:3.90.650.10 173 351 6.1E-69 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TVD_10145 8679db16eec507818ac752159a4f2cbf 352 SUPERFAMILY SSF55326 8 170 1.08E-51 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 Gene3D G3DSA:3.20.20.60 2 334 3.1E-163 T 11-10-2018 TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 470 8.0E-33 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 SUPERFAMILY SSF52935 345 473 7.46E-39 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 PRINTS PR01050 Pyruvate kinase family signature 59 75 3.7E-54 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 PRINTS PR01050 Pyruvate kinase family signature 216 242 3.7E-54 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 PRINTS PR01050 Pyruvate kinase family signature 186 200 3.7E-54 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 PRINTS PR01050 Pyruvate kinase family signature 243 267 3.7E-54 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 PRINTS PR01050 Pyruvate kinase family signature 293 311 3.7E-54 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 PRINTS PR01050 Pyruvate kinase family signature 312 328 3.7E-54 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 PRINTS PR01050 Pyruvate kinase family signature 268 292 3.7E-54 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 Pfam PF00224 Pyruvate kinase, barrel domain 1 337 2.8E-120 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 Gene3D G3DSA:3.40.1380.20 335 468 3.1E-163 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 SUPERFAMILY SSF50800 70 165 1.26E-23 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 472 1.8E-160 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 SUPERFAMILY SSF51621 1 339 1.19E-89 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TVD_12570 f9ae307069cb4ebc3c82b79b793d3a29 476 Gene3D G3DSA:2.40.33.10 70 168 3.1E-163 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 TVD_02545 28898864b220c0bb22faf4d3661f7fe7 179 Gene3D G3DSA:3.30.160.150 18 177 1.1E-38 T 11-10-2018 TVD_02545 28898864b220c0bb22faf4d3661f7fe7 179 Pfam PF04390 Lipopolysaccharide-assembly 37 160 7.3E-6 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 TVD_02545 28898864b220c0bb22faf4d3661f7fe7 179 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 165 22.507 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 TVD_10255 93faa68599d07c8cdd01ee3e39aa0ea8 581 Pfam PF00563 EAL domain 313 546 1.4E-70 T 11-10-2018 IPR001633 EAL domain TVD_10255 93faa68599d07c8cdd01ee3e39aa0ea8 581 SUPERFAMILY SSF141868 312 559 6.28E-85 T 11-10-2018 IPR035919 EAL domain superfamily TVD_10255 93faa68599d07c8cdd01ee3e39aa0ea8 581 SMART SM00267 121 296 9.7E-16 T 11-10-2018 IPR000160 GGDEF domain TVD_10255 93faa68599d07c8cdd01ee3e39aa0ea8 581 SMART SM00052 306 551 3.8E-104 T 11-10-2018 IPR001633 EAL domain TVD_10255 93faa68599d07c8cdd01ee3e39aa0ea8 581 Gene3D G3DSA:3.20.20.450 310 560 9.7E-94 T 11-10-2018 IPR035919 EAL domain superfamily TVD_10255 93faa68599d07c8cdd01ee3e39aa0ea8 581 Gene3D G3DSA:3.30.70.270 135 307 1.3E-30 T 11-10-2018 TVD_10255 93faa68599d07c8cdd01ee3e39aa0ea8 581 SUPERFAMILY SSF55073 138 293 3.69E-18 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_10255 93faa68599d07c8cdd01ee3e39aa0ea8 581 Pfam PF00990 Diguanylate cyclase, GGDEF domain 136 291 1.9E-19 T 11-10-2018 IPR000160 GGDEF domain TVD_04230 44a2bd8d21bc3d9157de767e4013a455 264 SMART SM00460 159 219 2.0E-15 T 11-10-2018 IPR002931 Transglutaminase-like TVD_04230 44a2bd8d21bc3d9157de767e4013a455 264 Gene3D G3DSA:3.10.620.30 78 239 2.0E-73 T 11-10-2018 TVD_04230 44a2bd8d21bc3d9157de767e4013a455 264 Gene3D G3DSA:2.60.40.2250 8 245 2.0E-73 T 11-10-2018 TVD_04230 44a2bd8d21bc3d9157de767e4013a455 264 Pfam PF01841 Transglutaminase-like superfamily 117 217 3.0E-24 T 11-10-2018 IPR002931 Transglutaminase-like TVD_04230 44a2bd8d21bc3d9157de767e4013a455 264 SUPERFAMILY SSF54001 19 246 1.54E-36 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TVD_06495 925945900eed930485c7410dd6eec4e5 371 Pfam PF01842 ACT domain 293 354 3.2E-10 T 11-10-2018 IPR002912 ACT domain TVD_06495 925945900eed930485c7410dd6eec4e5 371 SUPERFAMILY SSF48600 14 101 1.79E-21 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TVD_06495 925945900eed930485c7410dd6eec4e5 371 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 316 323 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 TVD_06495 925945900eed930485c7410dd6eec4e5 371 TIGRFAM TIGR01807 CM_P2: chorismate mutase 17 92 5.5E-29 T 11-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 TVD_06495 925945900eed930485c7410dd6eec4e5 371 Gene3D G3DSA:1.20.59.10 17 103 2.0E-28 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TVD_06495 925945900eed930485c7410dd6eec4e5 371 SUPERFAMILY SSF55021 273 368 2.37E-25 T 11-10-2018 TVD_06495 925945900eed930485c7410dd6eec4e5 371 Gene3D G3DSA:3.40.190.10 184 268 6.0E-59 T 11-10-2018 TVD_06495 925945900eed930485c7410dd6eec4e5 371 Pfam PF00800 Prephenate dehydratase 104 278 1.1E-60 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 TVD_06495 925945900eed930485c7410dd6eec4e5 371 SUPERFAMILY SSF53850 103 286 7.06E-59 T 11-10-2018 TVD_06495 925945900eed930485c7410dd6eec4e5 371 Gene3D G3DSA:3.40.190.10 106 276 6.0E-59 T 11-10-2018 TVD_06495 925945900eed930485c7410dd6eec4e5 371 PIRSF PIRSF001500 11 371 1.7E-133 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 TVD_06495 925945900eed930485c7410dd6eec4e5 371 SMART SM00830 21 102 1.8E-30 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TVD_06495 925945900eed930485c7410dd6eec4e5 371 Gene3D G3DSA:3.30.70.260 280 371 2.5E-27 T 11-10-2018 TVD_06495 925945900eed930485c7410dd6eec4e5 371 Pfam PF01817 Chorismate mutase type II 21 100 2.6E-23 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 TVD_08105 208198b8f731def0436a8bfe6ab52168 549 SUPERFAMILY SSF55781 15 177 1.16E-26 T 11-10-2018 TVD_08105 208198b8f731def0436a8bfe6ab52168 549 SUPERFAMILY SSF46689 422 546 1.97E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_08105 208198b8f731def0436a8bfe6ab52168 549 Gene3D G3DSA:3.30.450.40 15 188 5.3E-42 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_08105 208198b8f731def0436a8bfe6ab52168 549 Gene3D G3DSA:1.10.10.60 492 548 2.2E-12 T 11-10-2018 TVD_08105 208198b8f731def0436a8bfe6ab52168 549 Gene3D G3DSA:1.10.8.60 381 457 5.3E-19 T 11-10-2018 TVD_08105 208198b8f731def0436a8bfe6ab52168 549 Pfam PF02954 Bacterial regulatory protein, Fis family 506 544 2.7E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_08105 208198b8f731def0436a8bfe6ab52168 549 SMART SM00382 230 373 8.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_08105 208198b8f731def0436a8bfe6ab52168 549 SUPERFAMILY SSF52540 210 449 1.86E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_08105 208198b8f731def0436a8bfe6ab52168 549 Pfam PF01590 GAF domain 36 176 3.3E-13 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_08105 208198b8f731def0436a8bfe6ab52168 549 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 296 311 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TVD_08105 208198b8f731def0436a8bfe6ab52168 549 Gene3D G3DSA:3.40.50.300 198 380 5.7E-63 T 11-10-2018 TVD_08105 208198b8f731def0436a8bfe6ab52168 549 Pfam PF00158 Sigma-54 interaction domain 210 376 4.8E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TVD_08105 208198b8f731def0436a8bfe6ab52168 549 SMART SM00065 36 187 2.7E-22 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_08105 208198b8f731def0436a8bfe6ab52168 549 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 422 431 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TVD_08105 208198b8f731def0436a8bfe6ab52168 549 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 510 527 1.8E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_08105 208198b8f731def0436a8bfe6ab52168 549 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 527 547 1.8E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_11430 82c27016670628ceefa4332421b3b729 526 SMART SM00257 346 389 3.7E-14 T 11-10-2018 IPR018392 LysM domain TVD_11430 82c27016670628ceefa4332421b3b729 526 SMART SM00257 411 455 4.7E-8 T 11-10-2018 IPR018392 LysM domain TVD_11430 82c27016670628ceefa4332421b3b729 526 SMART SM00257 469 512 2.4E-11 T 11-10-2018 IPR018392 LysM domain TVD_11430 82c27016670628ceefa4332421b3b729 526 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 136 164 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 TVD_11430 82c27016670628ceefa4332421b3b729 526 Pfam PF01476 LysM domain 412 454 7.9E-11 T 11-10-2018 IPR018392 LysM domain TVD_11430 82c27016670628ceefa4332421b3b729 526 Pfam PF01476 LysM domain 470 510 5.0E-12 T 11-10-2018 IPR018392 LysM domain TVD_11430 82c27016670628ceefa4332421b3b729 526 Pfam PF01476 LysM domain 347 389 5.5E-12 T 11-10-2018 IPR018392 LysM domain TVD_11430 82c27016670628ceefa4332421b3b729 526 Gene3D G3DSA:3.10.350.10 465 516 1.8E-14 T 11-10-2018 IPR036779 LysM domain superfamily TVD_11430 82c27016670628ceefa4332421b3b729 526 Gene3D G3DSA:3.10.350.10 409 458 3.3E-12 T 11-10-2018 IPR036779 LysM domain superfamily TVD_11430 82c27016670628ceefa4332421b3b729 526 Gene3D G3DSA:3.10.350.10 345 395 7.2E-15 T 11-10-2018 IPR036779 LysM domain superfamily TVD_11430 82c27016670628ceefa4332421b3b729 526 SUPERFAMILY SSF54106 345 389 3.27E-10 T 11-10-2018 TVD_11430 82c27016670628ceefa4332421b3b729 526 SUPERFAMILY SSF53955 115 258 7.2E-37 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TVD_11430 82c27016670628ceefa4332421b3b729 526 SUPERFAMILY SSF54106 412 454 2.75E-8 T 11-10-2018 TVD_11430 82c27016670628ceefa4332421b3b729 526 Gene3D G3DSA:1.10.530.10 111 260 4.6E-27 T 11-10-2018 TVD_11430 82c27016670628ceefa4332421b3b729 526 Pfam PF01464 Transglycosylase SLT domain 127 226 1.8E-22 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 TVD_11430 82c27016670628ceefa4332421b3b729 526 SUPERFAMILY SSF54106 469 511 7.06E-10 T 11-10-2018 TVD_00190 cc3fdaa6cc264dff13f1934793600c81 178 Pfam PF01327 Polypeptide deformylase 4 163 3.4E-46 T 11-10-2018 IPR023635 Peptide deformylase TVD_00190 cc3fdaa6cc264dff13f1934793600c81 178 Gene3D G3DSA:3.90.45.10 1 177 2.5E-56 T 11-10-2018 IPR036821 Peptide deformylase superfamily TVD_00190 cc3fdaa6cc264dff13f1934793600c81 178 PIRSF PIRSF004749 1 178 2.5E-49 T 11-10-2018 IPR023635 Peptide deformylase TVD_00190 cc3fdaa6cc264dff13f1934793600c81 178 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 169 4.2E-38 T 11-10-2018 IPR023635 Peptide deformylase TVD_00190 cc3fdaa6cc264dff13f1934793600c81 178 SUPERFAMILY SSF56420 3 174 8.64E-55 T 11-10-2018 IPR036821 Peptide deformylase superfamily TVD_00190 cc3fdaa6cc264dff13f1934793600c81 178 PRINTS PR01576 Peptide deformylase signature 101 112 1.7E-33 T 11-10-2018 IPR023635 Peptide deformylase TVD_00190 cc3fdaa6cc264dff13f1934793600c81 178 PRINTS PR01576 Peptide deformylase signature 113 131 1.7E-33 T 11-10-2018 IPR023635 Peptide deformylase TVD_00190 cc3fdaa6cc264dff13f1934793600c81 178 PRINTS PR01576 Peptide deformylase signature 132 161 1.7E-33 T 11-10-2018 IPR023635 Peptide deformylase TVD_00190 cc3fdaa6cc264dff13f1934793600c81 178 PRINTS PR01576 Peptide deformylase signature 36 65 1.7E-33 T 11-10-2018 IPR023635 Peptide deformylase TVD_00190 cc3fdaa6cc264dff13f1934793600c81 178 Hamap MF_00163 Peptide deformylase [def]. 2 174 28.393 T 11-10-2018 IPR023635 Peptide deformylase TVD_03245 73168d3b6de4027d6186c836d4227681 435 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 270 8.6E-10 T 11-10-2018 IPR000014 PAS domain TVD_03245 73168d3b6de4027d6186c836d4227681 435 Gene3D G3DSA:3.30.70.270 272 434 3.7E-59 T 11-10-2018 TVD_03245 73168d3b6de4027d6186c836d4227681 435 Pfam PF00990 Diguanylate cyclase, GGDEF domain 275 430 8.6E-53 T 11-10-2018 IPR000160 GGDEF domain TVD_03245 73168d3b6de4027d6186c836d4227681 435 SMART SM00091 151 216 5.1E-9 T 11-10-2018 IPR000014 PAS domain TVD_03245 73168d3b6de4027d6186c836d4227681 435 SUPERFAMILY SSF55073 280 431 3.4E-50 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_03245 73168d3b6de4027d6186c836d4227681 435 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 273 430 1.6E-46 T 11-10-2018 IPR000160 GGDEF domain TVD_03245 73168d3b6de4027d6186c836d4227681 435 Gene3D G3DSA:3.30.450.20 140 271 1.0E-18 T 11-10-2018 TVD_03245 73168d3b6de4027d6186c836d4227681 435 Pfam PF08448 PAS fold 159 264 2.9E-19 T 11-10-2018 IPR013656 PAS fold-4 TVD_03245 73168d3b6de4027d6186c836d4227681 435 SMART SM00267 264 435 1.5E-64 T 11-10-2018 IPR000160 GGDEF domain TVD_03245 73168d3b6de4027d6186c836d4227681 435 SUPERFAMILY SSF55785 150 262 2.09E-16 T 11-10-2018 IPR035965 PAS domain superfamily TVD_08695 87a15324d71e344cf1cd326b244dff9f 361 Gene3D G3DSA:3.40.1750.20 217 281 2.5E-34 T 11-10-2018 TVD_08695 87a15324d71e344cf1cd326b244dff9f 361 SUPERFAMILY SSF52096 115 314 2.4E-26 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TVD_08695 87a15324d71e344cf1cd326b244dff9f 361 Pfam PF01343 Peptidase family S49 177 325 6.8E-40 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 TVD_08695 87a15324d71e344cf1cd326b244dff9f 361 Pfam PF08496 Peptidase family S49 N-terminal 2 173 7.7E-41 T 11-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 TVD_08695 87a15324d71e344cf1cd326b244dff9f 361 Gene3D G3DSA:3.90.226.10 119 316 2.5E-34 T 11-10-2018 TVD_08120 2c996a914c091ed7a54d26e7aeb27ed6 303 Gene3D G3DSA:3.40.50.300 3 271 2.1E-65 T 11-10-2018 TVD_08120 2c996a914c091ed7a54d26e7aeb27ed6 303 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 28 256 6.9E-95 T 11-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 TVD_08120 2c996a914c091ed7a54d26e7aeb27ed6 303 SMART SM00382 36 218 1.7E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_08120 2c996a914c091ed7a54d26e7aeb27ed6 303 SUPERFAMILY SSF52540 5 228 2.79E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_08120 2c996a914c091ed7a54d26e7aeb27ed6 303 Pfam PF00005 ABC transporter 28 168 1.5E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_08120 2c996a914c091ed7a54d26e7aeb27ed6 303 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_11145 40e920b1099178ea1046652aaa012d2d 305 SUPERFAMILY SSF56281 44 286 2.03E-54 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_11145 40e920b1099178ea1046652aaa012d2d 305 Gene3D G3DSA:3.60.15.10 23 258 2.0E-47 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_11145 40e920b1099178ea1046652aaa012d2d 305 SMART SM00849 43 232 1.4E-30 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_11145 40e920b1099178ea1046652aaa012d2d 305 Pfam PF00753 Metallo-beta-lactamase superfamily 43 232 4.8E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 SUPERFAMILY SSF82693 556 660 1.1E-11 T 11-10-2018 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 Gene3D G3DSA:3.30.70.1320 134 326 6.9E-288 T 11-10-2018 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 SUPERFAMILY SSF82693 41 128 2.46E-19 T 11-10-2018 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 Gene3D G3DSA:3.30.2090.10 178 268 6.9E-288 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 SUPERFAMILY SSF82866 289 490 5.75E-51 T 11-10-2018 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 Gene3D G3DSA:3.30.2090.10 709 797 6.9E-288 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 Gene3D G3DSA:3.30.70.1430 558 658 6.9E-288 T 11-10-2018 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 SUPERFAMILY SSF82866 794 1016 3.01E-46 T 11-10-2018 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 SUPERFAMILY SSF82693 136 324 1.07E-19 T 11-10-2018 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 SUPERFAMILY SSF82714 183 265 2.09E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 Gene3D G3DSA:3.30.70.1430 40 805 6.9E-288 T 11-10-2018 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 PRINTS PR00702 Acriflavin resistance protein family signature 613 627 2.2E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.2E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.2E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 2.2E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.2E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.2E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.2E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.2E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.2E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 Gene3D G3DSA:1.20.1640.10 504 1011 6.9E-288 T 11-10-2018 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 Pfam PF00873 AcrB/AcrD/AcrF family 4 1014 1.9E-262 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 SUPERFAMILY SSF82714 710 795 1.83E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 Gene3D G3DSA:1.20.1640.10 10 503 6.9E-288 T 11-10-2018 TVD_09490 0412aea5ce66b31e09e57fb85813beb6 1032 Gene3D G3DSA:3.30.70.1440 659 854 6.9E-288 T 11-10-2018 TVD_03515 ba2befbc85872b06839a399d162ffc7e 367 Gene3D G3DSA:3.60.150.10 1 361 3.0E-152 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TVD_03515 ba2befbc85872b06839a399d162ffc7e 367 Pfam PF01264 Chorismate synthase 10 345 1.0E-137 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TVD_03515 ba2befbc85872b06839a399d162ffc7e 367 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.009 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TVD_03515 ba2befbc85872b06839a399d162ffc7e 367 SUPERFAMILY SSF103263 4 351 1.02E-146 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TVD_03515 ba2befbc85872b06839a399d162ffc7e 367 PIRSF PIRSF001456 3 362 9.3E-138 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TVD_03515 ba2befbc85872b06839a399d162ffc7e 367 TIGRFAM TIGR00033 aroC: chorismate synthase 11 350 1.2E-136 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TVD_03515 ba2befbc85872b06839a399d162ffc7e 367 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TVD_03515 ba2befbc85872b06839a399d162ffc7e 367 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 301 80.11 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 262 1.3E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 1.3E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 50 69 1.3E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 1.3E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 144 7.3E-51 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 SUPERFAMILY SSF53671 2 300 1.83E-106 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 300 3.4E-118 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 Gene3D G3DSA:3.40.50.1370 4 134 8.1E-116 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 Gene3D G3DSA:3.40.50.1370 135 296 8.1E-116 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 152 298 5.2E-51 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 279 290 6.2E-31 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 121 135 6.2E-31 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 217 227 6.2E-31 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 81 94 6.2E-31 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 48 62 6.2E-31 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 TVD_08410 5f4a04ee6899f1aba2c4f24d63c3c1ba 305 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 50 57 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TVD_13520 caf0aab757320ba1fb93e3a6e29d89bc 438 Pfam PF01926 50S ribosome-binding GTPase 220 306 1.8E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_13520 caf0aab757320ba1fb93e3a6e29d89bc 438 Pfam PF12631 MnmE helical domain 124 435 7.3E-45 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 TVD_13520 caf0aab757320ba1fb93e3a6e29d89bc 438 Gene3D G3DSA:3.30.1360.120 1 122 1.2E-42 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TVD_13520 caf0aab757320ba1fb93e3a6e29d89bc 438 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 438 30.493 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 TVD_13520 caf0aab757320ba1fb93e3a6e29d89bc 438 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 438 1.1E-91 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 TVD_13520 caf0aab757320ba1fb93e3a6e29d89bc 438 SUPERFAMILY SSF52540 73 362 1.12E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_13520 caf0aab757320ba1fb93e3a6e29d89bc 438 Gene3D G3DSA:3.40.50.300 218 370 3.9E-87 T 11-10-2018 TVD_13520 caf0aab757320ba1fb93e3a6e29d89bc 438 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 121 2.9E-37 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 TVD_13520 caf0aab757320ba1fb93e3a6e29d89bc 438 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 218 334 1.9E-18 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TVD_13520 caf0aab757320ba1fb93e3a6e29d89bc 438 Gene3D G3DSA:1.20.120.430 123 438 3.9E-87 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 TVD_11910 6289aff0cb8163392d88871a78db31f1 401 Pfam PF01479 S4 domain 339 382 2.5E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_11910 6289aff0cb8163392d88871a78db31f1 401 Gene3D G3DSA:3.10.290.10 327 398 1.2E-15 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TVD_11910 6289aff0cb8163392d88871a78db31f1 401 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_11910 6289aff0cb8163392d88871a78db31f1 401 SMART SM00363 337 399 8.1E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_11910 6289aff0cb8163392d88871a78db31f1 401 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 398 7.9E-114 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TVD_11910 6289aff0cb8163392d88871a78db31f1 401 Gene3D G3DSA:3.40.50.620 3 216 5.8E-72 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_11910 6289aff0cb8163392d88871a78db31f1 401 SUPERFAMILY SSF55174 324 398 3.66E-17 T 11-10-2018 TVD_11910 6289aff0cb8163392d88871a78db31f1 401 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 1 398 47.421 T 11-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 TVD_11910 6289aff0cb8163392d88871a78db31f1 401 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 8.6E-73 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_11910 6289aff0cb8163392d88871a78db31f1 401 Gene3D G3DSA:1.10.240.10 217 326 1.1E-30 T 11-10-2018 TVD_11910 6289aff0cb8163392d88871a78db31f1 401 SUPERFAMILY SSF52374 7 316 8.85E-91 T 11-10-2018 TVD_11910 6289aff0cb8163392d88871a78db31f1 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 1.7E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TVD_11910 6289aff0cb8163392d88871a78db31f1 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 177 199 1.7E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TVD_11910 6289aff0cb8163392d88871a78db31f1 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 210 222 1.7E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TVD_11910 6289aff0cb8163392d88871a78db31f1 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 1.7E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 TVD_07455 c67db57ebb4febe10a12417b7e3ad590 107 Pfam PF01491 Frataxin-like domain 1 103 6.0E-27 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 TVD_07455 c67db57ebb4febe10a12417b7e3ad590 107 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 107 21.661 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 TVD_07455 c67db57ebb4febe10a12417b7e3ad590 107 SUPERFAMILY SSF55387 1 105 8.89E-28 T 11-10-2018 TVD_07455 c67db57ebb4febe10a12417b7e3ad590 107 SMART SM01219 1 107 3.0E-35 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 TVD_07455 c67db57ebb4febe10a12417b7e3ad590 107 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 11-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 TVD_07455 c67db57ebb4febe10a12417b7e3ad590 107 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 3 106 7.9E-29 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 TVD_07455 c67db57ebb4febe10a12417b7e3ad590 107 Gene3D G3DSA:3.30.920.10 1 107 1.5E-29 T 11-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 TVD_09640 059fd30947f2266bfb2e79ce35326a47 241 SUPERFAMILY SSF46785 23 97 5.44E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_09640 059fd30947f2266bfb2e79ce35326a47 241 Pfam PF04079 Segregation and condensation complex subunit ScpB 27 187 5.2E-52 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TVD_09640 059fd30947f2266bfb2e79ce35326a47 241 SUPERFAMILY SSF46785 103 178 2.56E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_09640 059fd30947f2266bfb2e79ce35326a47 241 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 27 189 9.6E-33 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TVD_09640 059fd30947f2266bfb2e79ce35326a47 241 Gene3D G3DSA:1.10.10.10 18 99 2.4E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_09640 059fd30947f2266bfb2e79ce35326a47 241 Gene3D G3DSA:1.10.10.10 100 198 7.2E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_05050 93a5539b77e05316470b9a0a18ecc6b8 1164 SUPERFAMILY SSF57997 228 426 6.1E-5 T 11-10-2018 TVD_05050 93a5539b77e05316470b9a0a18ecc6b8 1164 Gene3D G3DSA:3.40.50.300 1 249 1.6E-48 T 11-10-2018 TVD_05050 93a5539b77e05316470b9a0a18ecc6b8 1164 SUPERFAMILY SSF75553 484 652 3.01E-6 T 11-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 TVD_05050 93a5539b77e05316470b9a0a18ecc6b8 1164 Gene3D G3DSA:3.40.50.300 938 1163 1.8E-46 T 11-10-2018 TVD_05050 93a5539b77e05316470b9a0a18ecc6b8 1164 PIRSF PIRSF005719 1 568 6.3E-128 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein TVD_05050 93a5539b77e05316470b9a0a18ecc6b8 1164 PIRSF PIRSF005719 591 1164 1.7E-128 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein TVD_05050 93a5539b77e05316470b9a0a18ecc6b8 1164 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1157 22.952 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 TVD_05050 93a5539b77e05316470b9a0a18ecc6b8 1164 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1155 0.0 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 TVD_05050 93a5539b77e05316470b9a0a18ecc6b8 1164 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1148 6.0E-63 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TVD_05050 93a5539b77e05316470b9a0a18ecc6b8 1164 SUPERFAMILY SSF52540 3 1140 7.43E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_12440 f5739ba2c1826cffa2210558ecde451e 233 Pfam PF01427 D-ala-D-ala dipeptidase 31 229 2.5E-40 T 11-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 TVD_12440 f5739ba2c1826cffa2210558ecde451e 233 Gene3D G3DSA:3.30.1380.10 30 230 5.6E-70 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TVD_12440 f5739ba2c1826cffa2210558ecde451e 233 PIRSF PIRSF026671 8 233 2.0E-68 T 11-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 TVD_12440 f5739ba2c1826cffa2210558ecde451e 233 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 32 228 32.297 T 11-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 TVD_12440 f5739ba2c1826cffa2210558ecde451e 233 SUPERFAMILY SSF55166 30 227 2.79E-63 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 Gene3D G3DSA:3.30.450.20 310 426 2.9E-11 T 11-10-2018 TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 Pfam PF03924 CHASE domain 134 246 1.1E-13 T 11-10-2018 IPR006189 CHASE domain TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 SUPERFAMILY SSF55785 478 572 1.27E-6 T 11-10-2018 IPR035965 PAS domain superfamily TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 Pfam PF08448 PAS fold 448 566 1.2E-10 T 11-10-2018 IPR013656 PAS fold-4 TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 SMART SM01079 68 248 5.3E-30 T 11-10-2018 IPR006189 CHASE domain TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 SMART SM00267 564 741 1.8E-57 T 11-10-2018 IPR000160 GGDEF domain TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 314 431 1.5E-6 T 11-10-2018 IPR000014 PAS domain TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 SMART SM00091 441 506 100.0 T 11-10-2018 IPR000014 PAS domain TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 SMART SM00091 318 383 0.054 T 11-10-2018 IPR000014 PAS domain TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 Pfam PF00990 Diguanylate cyclase, GGDEF domain 576 736 2.2E-44 T 11-10-2018 IPR000160 GGDEF domain TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 Gene3D G3DSA:3.30.70.270 573 745 1.0E-54 T 11-10-2018 TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 Gene3D G3DSA:3.30.450.20 433 572 1.6E-12 T 11-10-2018 TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 572 740 1.7E-43 T 11-10-2018 IPR000160 GGDEF domain TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 SUPERFAMILY SSF55073 580 742 1.88E-45 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 SUPERFAMILY SSF55785 311 426 3.62E-14 T 11-10-2018 IPR035965 PAS domain superfamily TVD_06845 3d8f9706062cda19cf2930d91d6ab43e 751 Pfam PF00989 PAS fold 319 423 1.3E-7 T 11-10-2018 IPR013767 PAS fold GO:0006355 TVD_12635 419554abc7ae358c134fad93f1c40326 138 SUPERFAMILY SSF52172 15 134 1.71E-36 T 11-10-2018 IPR011006 CheY-like superfamily TVD_12635 419554abc7ae358c134fad93f1c40326 138 Gene3D G3DSA:3.40.50.12740 16 137 4.3E-39 T 11-10-2018 TVD_12635 419554abc7ae358c134fad93f1c40326 138 Pfam PF00072 Response regulator receiver domain 19 129 6.2E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_12635 419554abc7ae358c134fad93f1c40326 138 SMART SM00448 17 130 6.2E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_12670 d70c0ee1a1eb59fb0ffbc7307c05a720 131 SMART SM00732 1 100 3.8E-18 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 TVD_12670 d70c0ee1a1eb59fb0ffbc7307c05a720 131 SUPERFAMILY SSF53098 3 126 1.67E-30 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_12670 d70c0ee1a1eb59fb0ffbc7307c05a720 131 Gene3D G3DSA:3.30.420.140 2 129 8.2E-31 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 TVD_12670 d70c0ee1a1eb59fb0ffbc7307c05a720 131 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 130 18.668 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 TVD_12670 d70c0ee1a1eb59fb0ffbc7307c05a720 131 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 126 3.5E-24 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 TVD_12670 d70c0ee1a1eb59fb0ffbc7307c05a720 131 Pfam PF03652 Holliday junction resolvase 3 126 6.8E-31 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 TVD_09290 cd4b2cceadd183111c09432e98872105 226 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 14 204 3.8E-40 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like TVD_09290 cd4b2cceadd183111c09432e98872105 226 SUPERFAMILY SSF56784 8 209 9.49E-27 T 11-10-2018 IPR036412 HAD-like superfamily TVD_09290 cd4b2cceadd183111c09432e98872105 226 Gene3D G3DSA:3.40.50.1000 14 203 3.7E-37 T 11-10-2018 IPR023214 HAD superfamily TVD_09290 cd4b2cceadd183111c09432e98872105 226 Pfam PF12710 haloacid dehalogenase-like hydrolase 14 200 4.8E-38 T 11-10-2018 TVD_09290 cd4b2cceadd183111c09432e98872105 226 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 14 202 9.0E-31 T 11-10-2018 TVD_09290 cd4b2cceadd183111c09432e98872105 226 Gene3D G3DSA:1.20.1440.100 25 97 3.7E-37 T 11-10-2018 TVD_11315 d51fa077a09e63ac3c22cd0aa0a68d0b 280 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 249 1.1E-82 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD TVD_11315 d51fa077a09e63ac3c22cd0aa0a68d0b 280 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 6 245 36.367 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD TVD_11315 d51fa077a09e63ac3c22cd0aa0a68d0b 280 Gene3D G3DSA:1.25.40.10 34 254 9.8E-59 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_11315 d51fa077a09e63ac3c22cd0aa0a68d0b 280 SUPERFAMILY SSF48452 35 175 1.47E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_11315 d51fa077a09e63ac3c22cd0aa0a68d0b 280 Pfam PF13525 Outer membrane lipoprotein 35 237 3.0E-67 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like TVD_06535 a878829dd9bdaf3e02c18fb7c281a8ce 410 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 5 391 30.711 T 11-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 TVD_06535 a878829dd9bdaf3e02c18fb7c281a8ce 410 Gene3D G3DSA:1.25.40.10 39 172 4.5E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_06535 a878829dd9bdaf3e02c18fb7c281a8ce 410 Gene3D G3DSA:1.25.40.10 173 355 6.0E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_06535 a878829dd9bdaf3e02c18fb7c281a8ce 410 Pfam PF13432 Tetratricopeptide repeat 185 246 3.4E-7 T 11-10-2018 TVD_06535 a878829dd9bdaf3e02c18fb7c281a8ce 410 Pfam PF13432 Tetratricopeptide repeat 113 170 0.0065 T 11-10-2018 TVD_06535 a878829dd9bdaf3e02c18fb7c281a8ce 410 SUPERFAMILY SSF48452 107 318 1.23E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_00850 072de363003dbdaa20c7fd3416087c9b 181 Gene3D G3DSA:3.90.79.10 6 181 3.5E-44 T 11-10-2018 TVD_00850 072de363003dbdaa20c7fd3416087c9b 181 SUPERFAMILY SSF55811 7 178 3.79E-35 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TVD_00850 072de363003dbdaa20c7fd3416087c9b 181 ProSitePatterns PS00893 Nudix box signature. 79 100 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TVD_00850 072de363003dbdaa20c7fd3416087c9b 181 Pfam PF00293 NUDIX domain 46 154 3.5E-12 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TVD_10180 cd6c229b7a616519ebf456743523e0ff 786 SUPERFAMILY SSF55073 345 508 6.02E-50 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_10180 cd6c229b7a616519ebf456743523e0ff 786 SMART SM00052 516 762 7.1E-106 T 11-10-2018 IPR001633 EAL domain TVD_10180 cd6c229b7a616519ebf456743523e0ff 786 Pfam PF00563 EAL domain 522 754 1.3E-67 T 11-10-2018 IPR001633 EAL domain TVD_10180 cd6c229b7a616519ebf456743523e0ff 786 SUPERFAMILY SSF141868 521 769 1.96E-85 T 11-10-2018 IPR035919 EAL domain superfamily TVD_10180 cd6c229b7a616519ebf456743523e0ff 786 SMART SM00267 329 506 2.4E-61 T 11-10-2018 IPR000160 GGDEF domain TVD_10180 cd6c229b7a616519ebf456743523e0ff 786 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 505 8.6E-43 T 11-10-2018 IPR000160 GGDEF domain TVD_10180 cd6c229b7a616519ebf456743523e0ff 786 Gene3D G3DSA:1.20.1480.50 240 335 3.7E-5 T 11-10-2018 TVD_10180 cd6c229b7a616519ebf456743523e0ff 786 SUPERFAMILY SSF103190 40 157 4.71E-5 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TVD_10180 cd6c229b7a616519ebf456743523e0ff 786 Gene3D G3DSA:3.20.20.450 520 776 3.5E-94 T 11-10-2018 IPR035919 EAL domain superfamily TVD_10180 cd6c229b7a616519ebf456743523e0ff 786 Pfam PF14827 Double sensory domain of two-component sensor kinase 41 246 8.3E-8 T 11-10-2018 IPR029150 Double Cache domain 3 TVD_10180 cd6c229b7a616519ebf456743523e0ff 786 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 501 7.6E-49 T 11-10-2018 IPR000160 GGDEF domain TVD_10180 cd6c229b7a616519ebf456743523e0ff 786 Gene3D G3DSA:3.30.70.270 336 519 2.1E-59 T 11-10-2018 TVD_10180 cd6c229b7a616519ebf456743523e0ff 786 SMART SM00304 278 331 3.7E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_06590 d5d14bf40e8562dfa6b4154d6548b40e 412 Gene3D G3DSA:1.10.443.10 208 391 2.4E-22 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TVD_06590 d5d14bf40e8562dfa6b4154d6548b40e 412 Pfam PF00589 Phage integrase family 231 370 8.7E-17 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TVD_06590 d5d14bf40e8562dfa6b4154d6548b40e 412 SUPERFAMILY SSF56349 101 383 9.42E-53 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TVD_06590 d5d14bf40e8562dfa6b4154d6548b40e 412 Gene3D G3DSA:1.10.150.130 96 205 5.2E-13 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal TVD_06590 d5d14bf40e8562dfa6b4154d6548b40e 412 Gene3D G3DSA:3.30.160.390 2 95 9.4E-13 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily TVD_06590 d5d14bf40e8562dfa6b4154d6548b40e 412 Pfam PF13356 Arm DNA-binding domain 4 96 8.6E-17 T 11-10-2018 IPR025166 Integrase, DNA-binding domain TVD_12945 3fc716e45819f1f48bd7d74c357e495f 242 Pfam PF01694 Rhomboid family 63 196 1.7E-20 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 TVD_12945 3fc716e45819f1f48bd7d74c357e495f 242 SUPERFAMILY SSF144091 31 198 2.75E-26 T 11-10-2018 TVD_12945 3fc716e45819f1f48bd7d74c357e495f 242 Gene3D G3DSA:1.20.1540.10 24 198 6.0E-12 T 11-10-2018 IPR035952 Rhomboid-like superfamily TVD_03600 bee0e226b2ed97304f64d80b312689f3 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 11-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03600 bee0e226b2ed97304f64d80b312689f3 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 3.1E-125 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03600 bee0e226b2ed97304f64d80b312689f3 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 50.27 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03600 bee0e226b2ed97304f64d80b312689f3 417 Gene3D G3DSA:1.10.645.20 4 417 3.1E-175 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03600 bee0e226b2ed97304f64d80b312689f3 417 SUPERFAMILY SSF56762 16 417 6.41E-139 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03600 bee0e226b2ed97304f64d80b312689f3 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 1.1E-185 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_04715 46c9237c164249dce117456c3944d7a2 314 SUPERFAMILY SSF52540 5 233 3.72E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04715 46c9237c164249dce117456c3944d7a2 314 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_04715 46c9237c164249dce117456c3944d7a2 314 Gene3D G3DSA:3.40.50.300 1 237 1.5E-63 T 11-10-2018 TVD_04715 46c9237c164249dce117456c3944d7a2 314 Pfam PF00005 ABC transporter 22 166 6.6E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_04715 46c9237c164249dce117456c3944d7a2 314 SMART SM00382 31 213 3.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_06815 bae7a29700118a4df268696fbfb5349f 475 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 102 115 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_06815 bae7a29700118a4df268696fbfb5349f 475 SUPERFAMILY SSF51735 191 469 1.14E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_06815 bae7a29700118a4df268696fbfb5349f 475 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 228 248 1.3E-32 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_06815 bae7a29700118a4df268696fbfb5349f 475 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 178 200 1.3E-32 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_06815 bae7a29700118a4df268696fbfb5349f 475 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 357 368 1.3E-32 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_06815 bae7a29700118a4df268696fbfb5349f 475 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 94 108 1.3E-32 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_06815 bae7a29700118a4df268696fbfb5349f 475 SUPERFAMILY SSF53223 9 189 3.84E-53 T 11-10-2018 TVD_06815 bae7a29700118a4df268696fbfb5349f 475 PIRSF PIRSF000185 4 472 1.5E-139 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 TVD_06815 bae7a29700118a4df268696fbfb5349f 475 Gene3D G3DSA:3.40.50.10860 40 186 1.5E-54 T 11-10-2018 TVD_06815 bae7a29700118a4df268696fbfb5349f 475 Gene3D G3DSA:3.40.50.720 187 473 1.2E-87 T 11-10-2018 TVD_06815 bae7a29700118a4df268696fbfb5349f 475 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 40 166 1.3E-50 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_06815 bae7a29700118a4df268696fbfb5349f 475 SMART SM00839 189 473 3.5E-73 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_06815 bae7a29700118a4df268696fbfb5349f 475 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 187 378 7.8E-50 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 TVD_06405 8fee2b9a2549e0d876208ce69eff4eab 163 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 151 4.6E-40 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I TVD_06405 8fee2b9a2549e0d876208ce69eff4eab 163 Gene3D G3DSA:3.40.50.2300 1 160 2.0E-58 T 11-10-2018 TVD_06405 8fee2b9a2549e0d876208ce69eff4eab 163 SUPERFAMILY SSF52788 2 154 3.53E-52 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily TVD_06405 8fee2b9a2549e0d876208ce69eff4eab 163 SMART SM00226 4 153 1.3E-49 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I TVD_06405 8fee2b9a2549e0d876208ce69eff4eab 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 83 98 3.9E-22 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 TVD_06405 8fee2b9a2549e0d876208ce69eff4eab 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 106 119 3.9E-22 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 TVD_06405 8fee2b9a2549e0d876208ce69eff4eab 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 3.9E-22 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 TVD_06405 8fee2b9a2549e0d876208ce69eff4eab 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 125 140 3.9E-22 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 TVD_06405 8fee2b9a2549e0d876208ce69eff4eab 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 49 65 3.9E-22 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 TVD_12290 a55d3f439b05d6d20ab5ba2f0d48c815 96 SMART SM00883 2 94 2.9E-60 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TVD_12290 a55d3f439b05d6d20ab5ba2f0d48c815 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 28.101 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TVD_12290 a55d3f439b05d6d20ab5ba2f0d48c815 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 TVD_12290 a55d3f439b05d6d20ab5ba2f0d48c815 96 Gene3D G3DSA:2.30.33.40 1 96 5.1E-38 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 TVD_12290 a55d3f439b05d6d20ab5ba2f0d48c815 96 SUPERFAMILY SSF50129 1 95 1.13E-36 T 11-10-2018 IPR011032 GroES-like superfamily TVD_12290 a55d3f439b05d6d20ab5ba2f0d48c815 96 PRINTS PR00297 10kDa chaperonin signature 81 94 1.3E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TVD_12290 a55d3f439b05d6d20ab5ba2f0d48c815 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.3E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TVD_12290 a55d3f439b05d6d20ab5ba2f0d48c815 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.3E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TVD_12290 a55d3f439b05d6d20ab5ba2f0d48c815 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.3E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TVD_12290 a55d3f439b05d6d20ab5ba2f0d48c815 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 6.1E-36 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TVD_13255 bc34bb7156a795683b31d559ce7cdb7b 270 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 16 152 8.4E-24 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_13255 bc34bb7156a795683b31d559ce7cdb7b 270 Gene3D G3DSA:3.40.50.700 4 169 6.1E-39 T 11-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily TVD_13255 bc34bb7156a795683b31d559ce7cdb7b 270 SUPERFAMILY SSF56770 3 216 3.79E-43 T 11-10-2018 TVD_03885 70fa21dac60d235a4e5109f3bb9ffc02 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 69 2.7E-18 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TVD_03885 70fa21dac60d235a4e5109f3bb9ffc02 80 Gene3D G3DSA:3.40.1620.40 2 67 1.1E-24 T 11-10-2018 TVD_03885 70fa21dac60d235a4e5109f3bb9ffc02 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 53 9.9E-9 T 11-10-2018 TVD_03885 70fa21dac60d235a4e5109f3bb9ffc02 80 SUPERFAMILY SSF143120 1 79 8.63E-20 T 11-10-2018 IPR036165 YefM-like superfamily TVD_10835 3ed4d182f9cad34708543db872d32396 397 SUPERFAMILY SSF53383 32 394 9.97E-121 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_10835 3ed4d182f9cad34708543db872d32396 397 Gene3D G3DSA:3.40.640.10 7 259 9.5E-88 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_10835 3ed4d182f9cad34708543db872d32396 397 PIRSF PIRSF001434 2 397 3.9E-132 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TVD_10835 3ed4d182f9cad34708543db872d32396 397 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 393 5.1E-138 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TVD_10835 3ed4d182f9cad34708543db872d32396 397 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 203 217 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 TVD_10835 3ed4d182f9cad34708543db872d32396 397 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 13 394 54.681 T 11-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 TVD_10835 3ed4d182f9cad34708543db872d32396 397 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 12 393 3.6E-175 T 11-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 TVD_10835 3ed4d182f9cad34708543db872d32396 397 Gene3D G3DSA:3.90.1150.10 262 397 1.5E-51 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_06755 9abb1438b59dad4e7298bf9dc9ff3f26 418 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 418 1.7E-218 T 11-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 TVD_06755 9abb1438b59dad4e7298bf9dc9ff3f26 418 Gene3D G3DSA:3.40.718.10 1 418 8.4E-181 T 11-10-2018 TVD_06755 9abb1438b59dad4e7298bf9dc9ff3f26 418 SUPERFAMILY SSF53659 3 418 1.34E-143 T 11-10-2018 TVD_06755 9abb1438b59dad4e7298bf9dc9ff3f26 418 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 413 4.6E-110 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TVD_06755 9abb1438b59dad4e7298bf9dc9ff3f26 418 SMART SM01329 30 414 5.7E-171 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TVD_06755 9abb1438b59dad4e7298bf9dc9ff3f26 418 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 305 324 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 TVD_08525 ae925e403c0bc6da899652b005575ba8 211 Gene3D G3DSA:3.40.470.10 6 210 1.6E-67 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TVD_08525 ae925e403c0bc6da899652b005575ba8 211 SUPERFAMILY SSF52141 11 210 6.21E-50 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TVD_08525 ae925e403c0bc6da899652b005575ba8 211 SMART SM00986 37 203 1.3E-35 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TVD_08525 ae925e403c0bc6da899652b005575ba8 211 Pfam PF03167 Uracil DNA glycosylase superfamily 37 206 5.2E-34 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TVD_08525 ae925e403c0bc6da899652b005575ba8 211 SMART SM00987 37 203 1.3E-35 T 11-10-2018 TVD_06960 56308258f72bb7ce0c110f0c60138d08 656 Pfam PF00990 Diguanylate cyclase, GGDEF domain 210 371 9.0E-43 T 11-10-2018 IPR000160 GGDEF domain TVD_06960 56308258f72bb7ce0c110f0c60138d08 656 Gene3D G3DSA:3.30.70.270 207 389 1.2E-50 T 11-10-2018 TVD_06960 56308258f72bb7ce0c110f0c60138d08 656 SMART SM00267 199 376 6.7E-54 T 11-10-2018 IPR000160 GGDEF domain TVD_06960 56308258f72bb7ce0c110f0c60138d08 656 Gene3D G3DSA:3.20.20.450 390 638 2.7E-88 T 11-10-2018 IPR035919 EAL domain superfamily TVD_06960 56308258f72bb7ce0c110f0c60138d08 656 SUPERFAMILY SSF55073 215 378 2.2E-43 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_06960 56308258f72bb7ce0c110f0c60138d08 656 SUPERFAMILY SSF141868 392 640 1.05E-82 T 11-10-2018 IPR035919 EAL domain superfamily TVD_06960 56308258f72bb7ce0c110f0c60138d08 656 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 208 375 1.8E-38 T 11-10-2018 IPR000160 GGDEF domain TVD_06960 56308258f72bb7ce0c110f0c60138d08 656 SMART SM00052 386 633 9.0E-105 T 11-10-2018 IPR001633 EAL domain TVD_06960 56308258f72bb7ce0c110f0c60138d08 656 Pfam PF00563 EAL domain 397 628 8.1E-70 T 11-10-2018 IPR001633 EAL domain TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 SUPERFAMILY SSF88697 285 375 5.08E-25 T 11-10-2018 IPR015947 PUA-like superfamily TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 Pfam PF00696 Amino acid kinase family 14 242 3.1E-43 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 PRINTS PR00474 Glutamate 5-kinase family signature 217 237 1.0E-51 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 PRINTS PR00474 Glutamate 5-kinase family signature 156 183 1.0E-51 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 PRINTS PR00474 Glutamate 5-kinase family signature 84 112 1.0E-51 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 PRINTS PR00474 Glutamate 5-kinase family signature 124 145 1.0E-51 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 PRINTS PR00474 Glutamate 5-kinase family signature 50 64 1.0E-51 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 13 267 35.829 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 Pfam PF01472 PUA domain 285 359 2.1E-22 T 11-10-2018 IPR002478 PUA domain GO:0003723 TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 PIRSF PIRSF000729 9 377 1.3E-128 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 13 374 1.3E-128 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 Gene3D G3DSA:3.40.1160.10 3 273 2.5E-88 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 Gene3D G3DSA:2.30.130.10 274 376 1.0E-32 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 SUPERFAMILY SSF53633 13 265 3.01E-66 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 215 232 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 TVD_03170 603c98ee7e2186da74ac1cd4cc9de3e6 377 SMART SM00359 285 368 2.2E-18 T 11-10-2018 IPR002478 PUA domain GO:0003723 TVD_01655 8f629c4c54cc347eaa7d9c60e3ef2f6e 432 Gene3D G3DSA:3.30.420.380 14 164 5.9E-26 T 11-10-2018 TVD_01655 8f629c4c54cc347eaa7d9c60e3ef2f6e 432 SUPERFAMILY SSF53067 22 143 1.42E-21 T 11-10-2018 TVD_01655 8f629c4c54cc347eaa7d9c60e3ef2f6e 432 Pfam PF12693 GspL periplasmic domain 276 430 4.5E-15 T 11-10-2018 IPR025691 GspL periplasmic domain TVD_01655 8f629c4c54cc347eaa7d9c60e3ef2f6e 432 Pfam PF05134 Type II secretion system (T2SS), protein L 42 206 2.4E-15 T 11-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain TVD_01655 8f629c4c54cc347eaa7d9c60e3ef2f6e 432 PIRSF PIRSF015761 14 432 1.9E-31 T 11-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 Gene3D G3DSA:1.25.40.10 139 286 1.2E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 Gene3D G3DSA:1.25.40.10 287 454 2.0E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 Gene3D G3DSA:1.25.40.10 455 757 6.6E-52 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 Gene3D G3DSA:1.25.40.10 758 942 1.0E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SUPERFAMILY SSF48452 406 673 1.07E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SUPERFAMILY SSF48452 188 377 4.8E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 Gene3D G3DSA:1.25.40.10 42 136 9.6E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 Pfam PF13432 Tetratricopeptide repeat 185 247 5.8E-9 T 11-10-2018 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 Pfam PF13432 Tetratricopeptide repeat 594 657 7.7E-7 T 11-10-2018 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 Pfam PF13432 Tetratricopeptide repeat 460 521 1.1E-7 T 11-10-2018 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 Pfam PF13432 Tetratricopeptide repeat 527 587 7.9E-7 T 11-10-2018 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 Pfam PF13432 Tetratricopeptide repeat 392 446 1.8E-4 T 11-10-2018 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SUPERFAMILY SSF48452 643 753 3.8E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 283 316 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 46 79 14.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 317 350 1.7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 658 691 93.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 522 555 440.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 726 758 55.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 624 657 0.43 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 80 113 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 181 214 71.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 215 248 0.039 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 590 623 32.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 556 589 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 896 929 370.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 829 861 140.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 488 521 0.031 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SMART SM00028 862 895 16.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SUPERFAMILY SSF48452 787 922 1.66E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 Pfam PF14559 Tetratricopeptide repeat 58 116 1.9E-5 T 11-10-2018 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 Pfam PF14559 Tetratricopeptide repeat 872 929 5.8E-6 T 11-10-2018 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 Pfam PF14559 Tetratricopeptide repeat 293 350 9.3E-6 T 11-10-2018 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 Pfam PF14559 Tetratricopeptide repeat 670 733 8.4E-6 T 11-10-2018 TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 27 924 1.4E-168 T 11-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative TVD_00260 e08b4ccec479ef3d426f48638a9a0364 942 SUPERFAMILY SSF48452 47 131 1.28E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_11110 1de59d72c03fd1e4db5536613c596911 504 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 319 409 1.3E-26 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 TVD_11110 1de59d72c03fd1e4db5536613c596911 504 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 421 503 2.1E-23 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 TVD_11110 1de59d72c03fd1e4db5536613c596911 504 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 5 503 2.3E-253 T 11-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 TVD_11110 1de59d72c03fd1e4db5536613c596911 504 Gene3D G3DSA:3.40.50.1100 14 317 2.6E-143 T 11-10-2018 TVD_11110 1de59d72c03fd1e4db5536613c596911 504 SUPERFAMILY SSF53686 4 355 2.62E-108 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TVD_11110 1de59d72c03fd1e4db5536613c596911 504 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 TVD_11110 1de59d72c03fd1e4db5536613c596911 504 Gene3D G3DSA:3.40.1020.10 328 504 1.6E-75 T 11-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 TVD_11110 1de59d72c03fd1e4db5536613c596911 504 SUPERFAMILY SSF55021 410 503 5.26E-27 T 11-10-2018 TVD_11110 1de59d72c03fd1e4db5536613c596911 504 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 306 1.2E-87 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TVD_11110 1de59d72c03fd1e4db5536613c596911 504 Gene3D G3DSA:3.40.50.1100 50 146 2.6E-143 T 11-10-2018 TVD_11110 1de59d72c03fd1e4db5536613c596911 504 SUPERFAMILY SSF55021 327 413 1.1E-28 T 11-10-2018 TVD_03445 024b9b1f33bbf9e7e32685651271638b 297 SUPERFAMILY SSF51430 28 287 5.5E-47 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TVD_03445 024b9b1f33bbf9e7e32685651271638b 297 Gene3D G3DSA:3.20.20.100 25 291 1.8E-39 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TVD_03445 024b9b1f33bbf9e7e32685651271638b 297 Pfam PF00248 Aldo/keto reductase family 39 287 1.5E-24 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain TVD_10605 5856dcaff2962bde43094caf32090771 393 Pfam PF04055 Radical SAM superfamily 72 214 7.6E-8 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TVD_10605 5856dcaff2962bde43094caf32090771 393 Gene3D G3DSA:3.20.20.70 59 318 3.9E-8 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_10605 5856dcaff2962bde43094caf32090771 393 SMART SM00729 63 267 0.0029 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TVD_10605 5856dcaff2962bde43094caf32090771 393 SUPERFAMILY SSF102114 64 268 4.45E-17 T 11-10-2018 TVD_05505 134a5781fceece6dd60434151546f78a 280 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 17 251 2.0E-60 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_05505 134a5781fceece6dd60434151546f78a 280 Gene3D G3DSA:3.30.70.580 12 118 2.7E-34 T 11-10-2018 TVD_05505 134a5781fceece6dd60434151546f78a 280 SUPERFAMILY SSF55120 15 262 7.05E-84 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_05505 134a5781fceece6dd60434151546f78a 280 Gene3D G3DSA:3.30.70.660 120 256 5.8E-46 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 TVD_05505 134a5781fceece6dd60434151546f78a 280 Pfam PF01416 tRNA pseudouridine synthase 22 116 1.0E-6 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_05505 134a5781fceece6dd60434151546f78a 280 Pfam PF01416 tRNA pseudouridine synthase 158 258 2.0E-28 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_05505 134a5781fceece6dd60434151546f78a 280 PIRSF PIRSF001430 14 270 9.2E-67 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_05505 134a5781fceece6dd60434151546f78a 280 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 15 257 32.986 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_04670 fc95a486baf6ff8e6235265be1ace26d 611 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 11-10-2018 IPR010916 TonB box, conserved site TVD_04670 fc95a486baf6ff8e6235265be1ace26d 611 Gene3D G3DSA:2.170.130.10 30 154 2.1E-33 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TVD_04670 fc95a486baf6ff8e6235265be1ace26d 611 Pfam PF00593 TonB dependent receptor 207 609 1.8E-45 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TVD_04670 fc95a486baf6ff8e6235265be1ace26d 611 SUPERFAMILY SSF56935 31 608 2.08E-111 T 11-10-2018 TVD_04670 fc95a486baf6ff8e6235265be1ace26d 611 Gene3D G3DSA:2.40.170.20 160 609 2.8E-117 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TVD_04670 fc95a486baf6ff8e6235265be1ace26d 611 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 150 9.8E-27 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 14 153 1.2E-33 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 SUPERFAMILY SSF53738 2 213 1.18E-44 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 Gene3D G3DSA:3.40.120.10 2 189 8.3E-73 T 11-10-2018 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 Gene3D G3DSA:3.40.120.10 190 292 1.6E-36 T 11-10-2018 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 SUPERFAMILY SSF53738 184 293 5.49E-28 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 SUPERFAMILY SSF55957 411 545 6.28E-42 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 Gene3D G3DSA:3.40.120.10 293 390 4.4E-38 T 11-10-2018 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 456 513 2.1E-5 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 106 120 1.1E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 226 1.1E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 272 287 1.1E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 243 256 1.1E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 Gene3D G3DSA:3.30.310.50 391 545 6.7E-57 T 11-10-2018 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 SUPERFAMILY SSF53738 280 416 5.0E-37 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 297 409 7.8E-29 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 107 116 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_04975 f585f97cee7fc3d4565035609fb00d5f 545 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 185 288 1.7E-12 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_02455 3975dc4c06250f2c8a1176ae49a41c3a 143 SUPERFAMILY SSF52080 4 142 7.59E-42 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily TVD_02455 3975dc4c06250f2c8a1176ae49a41c3a 143 Gene3D G3DSA:3.100.10.10 69 143 1.2E-14 T 11-10-2018 TVD_02455 3975dc4c06250f2c8a1176ae49a41c3a 143 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 142 8.0E-30 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P TVD_02455 3975dc4c06250f2c8a1176ae49a41c3a 143 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 2.3E-46 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02455 3975dc4c06250f2c8a1176ae49a41c3a 143 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 18.941 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 TVD_00060 1e4d591f3fdda0e26285a3f3805f592d 242 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 54 237 9.4E-48 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 TVD_00060 1e4d591f3fdda0e26285a3f3805f592d 242 Pfam PF02390 Putative methyltransferase 64 232 1.6E-50 T 11-10-2018 TVD_00060 1e4d591f3fdda0e26285a3f3805f592d 242 Gene3D G3DSA:3.40.50.150 29 241 1.4E-64 T 11-10-2018 TVD_00060 1e4d591f3fdda0e26285a3f3805f592d 242 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 22 238 31.144 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 TVD_00060 1e4d591f3fdda0e26285a3f3805f592d 242 SUPERFAMILY SSF53335 14 237 4.39E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_08560 14a7725a00de63aa7f8eff9de60ce76c 611 SUPERFAMILY SSF89000 296 450 9.02E-49 T 11-10-2018 TVD_08560 14a7725a00de63aa7f8eff9de60ce76c 611 Gene3D G3DSA:3.20.20.70 1 454 1.7E-167 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_08560 14a7725a00de63aa7f8eff9de60ce76c 611 SUPERFAMILY SSF51569 1 299 2.56E-88 T 11-10-2018 TVD_08560 14a7725a00de63aa7f8eff9de60ce76c 611 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 563 580 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TVD_08560 14a7725a00de63aa7f8eff9de60ce76c 611 Pfam PF00682 HMGL-like 3 266 2.6E-48 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TVD_08560 14a7725a00de63aa7f8eff9de60ce76c 611 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 6 603 2.1E-249 T 11-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 TVD_08560 14a7725a00de63aa7f8eff9de60ce76c 611 Gene3D G3DSA:2.40.50.100 532 608 4.7E-23 T 11-10-2018 TVD_08560 14a7725a00de63aa7f8eff9de60ce76c 611 SUPERFAMILY SSF51230 536 606 7.59E-20 T 11-10-2018 IPR011053 Single hybrid motif TVD_08560 14a7725a00de63aa7f8eff9de60ce76c 611 Pfam PF00364 Biotin-requiring enzyme 540 606 9.0E-17 T 11-10-2018 IPR000089 Biotin/lipoyl attachment TVD_08560 14a7725a00de63aa7f8eff9de60ce76c 611 Pfam PF02436 Conserved carboxylase domain 291 478 2.4E-54 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 TVD_03195 f70f958bcdd1ba99c9304f2ffe10317e 432 SUPERFAMILY SSF52343 292 427 1.31E-30 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_03195 f70f958bcdd1ba99c9304f2ffe10317e 432 Pfam PF08022 FAD-binding domain 211 300 5.6E-8 T 11-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 TVD_03195 f70f958bcdd1ba99c9304f2ffe10317e 432 Pfam PF00175 Oxidoreductase NAD-binding domain 315 408 3.7E-11 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TVD_03195 f70f958bcdd1ba99c9304f2ffe10317e 432 Gene3D G3DSA:2.40.30.10 201 301 2.1E-14 T 11-10-2018 TVD_03195 f70f958bcdd1ba99c9304f2ffe10317e 432 Pfam PF01794 Ferric reductase like transmembrane component 47 167 4.4E-12 T 11-10-2018 IPR013130 Ferric reductase transmembrane component-like domain TVD_03195 f70f958bcdd1ba99c9304f2ffe10317e 432 Gene3D G3DSA:3.40.50.80 304 431 1.3E-30 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_03195 f70f958bcdd1ba99c9304f2ffe10317e 432 SUPERFAMILY SSF63380 205 302 1.0E-16 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TVD_07485 37436042bafb56afc4ed07bafa96476d 316 SMART SM00267 159 316 1.3E-5 T 11-10-2018 IPR000160 GGDEF domain TVD_07485 37436042bafb56afc4ed07bafa96476d 316 Gene3D G3DSA:3.30.70.270 161 313 1.4E-12 T 11-10-2018 TVD_07485 37436042bafb56afc4ed07bafa96476d 316 Pfam PF00990 Diguanylate cyclase, GGDEF domain 170 285 4.1E-7 T 11-10-2018 IPR000160 GGDEF domain TVD_07485 37436042bafb56afc4ed07bafa96476d 316 SUPERFAMILY SSF55781 14 162 5.61E-14 T 11-10-2018 TVD_07485 37436042bafb56afc4ed07bafa96476d 316 Gene3D G3DSA:3.30.450.40 3 160 1.2E-7 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_07485 37436042bafb56afc4ed07bafa96476d 316 SUPERFAMILY SSF55073 175 309 2.67E-12 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 SUPERFAMILY SSF82693 69 157 9.16E-22 T 11-10-2018 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 Gene3D G3DSA:3.30.70.1440 691 886 1.2E-245 T 11-10-2018 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 SUPERFAMILY SSF82866 316 508 2.09E-36 T 11-10-2018 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 Pfam PF00873 AcrB/AcrD/AcrF family 32 1045 1.3E-155 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 Gene3D G3DSA:3.30.2090.10 739 826 1.2E-245 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 Gene3D G3DSA:3.30.70.1430 583 690 1.2E-245 T 11-10-2018 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 Gene3D G3DSA:3.30.70.1430 68 834 1.2E-245 T 11-10-2018 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 SUPERFAMILY SSF82714 751 822 3.01E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 Gene3D G3DSA:3.30.70.1320 159 349 1.2E-245 T 11-10-2018 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 SUPERFAMILY SSF82714 206 287 6.02E-6 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 Gene3D G3DSA:1.20.1640.10 526 1042 1.2E-245 T 11-10-2018 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 Gene3D G3DSA:1.20.1640.10 38 525 1.2E-245 T 11-10-2018 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 SUPERFAMILY SSF82866 826 1049 3.66E-43 T 11-10-2018 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 PRINTS PR00702 Acriflavin resistance protein family signature 66 84 8.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 8.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 PRINTS PR00702 Acriflavin resistance protein family signature 38 62 8.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 PRINTS PR00702 Acriflavin resistance protein family signature 407 431 8.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 PRINTS PR00702 Acriflavin resistance protein family signature 353 376 8.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 PRINTS PR00702 Acriflavin resistance protein family signature 485 508 8.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09685 62e0a51aac9c6413b2fd9cc19dc2d003 1062 Gene3D G3DSA:3.30.2090.10 201 292 1.2E-245 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_07425 3740a266c0bb357ac95bad450cb12444 323 Gene3D G3DSA:3.40.50.720 29 321 4.0E-110 T 11-10-2018 TVD_07425 3740a266c0bb357ac95bad450cb12444 323 Gene3D G3DSA:3.40.50.720 102 291 4.0E-110 T 11-10-2018 TVD_07425 3740a266c0bb357ac95bad450cb12444 323 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TVD_07425 3740a266c0bb357ac95bad450cb12444 323 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TVD_07425 3740a266c0bb357ac95bad450cb12444 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 292 1.4E-53 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TVD_07425 3740a266c0bb357ac95bad450cb12444 323 SUPERFAMILY SSF52283 20 141 5.48E-27 T 11-10-2018 TVD_07425 3740a266c0bb357ac95bad450cb12444 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 33 322 1.6E-22 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 TVD_07425 3740a266c0bb357ac95bad450cb12444 323 SUPERFAMILY SSF51735 106 293 1.08E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_05750 8d238e76dabf806e11493046b87456bc 261 Pfam PF01872 RibD C-terminal domain 54 232 1.9E-37 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 TVD_05750 8d238e76dabf806e11493046b87456bc 261 SUPERFAMILY SSF53597 54 239 1.03E-48 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 TVD_05750 8d238e76dabf806e11493046b87456bc 261 Gene3D G3DSA:3.40.430.10 48 259 2.4E-56 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 TVD_03815 355a2d1417ce140f2b5ae78e5f24a808 438 Pfam PF00753 Metallo-beta-lactamase superfamily 243 366 7.0E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_03815 355a2d1417ce140f2b5ae78e5f24a808 438 SMART SM00450 39 140 7.3E-16 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_03815 355a2d1417ce140f2b5ae78e5f24a808 438 Gene3D G3DSA:3.40.250.10 17 144 1.4E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_03815 355a2d1417ce140f2b5ae78e5f24a808 438 ProSitePatterns PS00683 Rhodanese C-terminal signature. 124 134 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 TVD_03815 355a2d1417ce140f2b5ae78e5f24a808 438 SMART SM00849 181 366 3.4E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_03815 355a2d1417ce140f2b5ae78e5f24a808 438 Pfam PF00581 Rhodanese-like domain 45 136 7.6E-10 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_03815 355a2d1417ce140f2b5ae78e5f24a808 438 Gene3D G3DSA:3.60.15.10 154 390 1.6E-40 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_03815 355a2d1417ce140f2b5ae78e5f24a808 438 SUPERFAMILY SSF52821 27 141 1.44E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_03815 355a2d1417ce140f2b5ae78e5f24a808 438 SUPERFAMILY SSF56281 142 409 2.38E-45 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 PIRSF PIRSF001336 1 634 8.6E-229 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 TIGRFAM TIGR01273 speA: arginine decarboxylase 6 633 6.1E-229 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 284 298 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 100 118 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 247 260 6.4E-14 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 341 360 6.4E-14 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 100 118 6.4E-14 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 543 556 6.4E-14 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 SUPERFAMILY SSF51419 69 353 1.36E-58 T 11-10-2018 IPR029066 PLP-binding barrel TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 Gene3D G3DSA:2.40.37.10 15 570 5.8E-214 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 Gene3D G3DSA:3.20.20.10 69 356 5.8E-214 T 11-10-2018 IPR029066 PLP-binding barrel TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 78 351 5.4E-42 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 PRINTS PR01180 Arginine decarboxylase signature 92 106 2.1E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 PRINTS PR01180 Arginine decarboxylase signature 465 486 2.1E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 PRINTS PR01180 Arginine decarboxylase signature 68 83 2.1E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 PRINTS PR01180 Arginine decarboxylase signature 543 564 2.1E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 PRINTS PR01180 Arginine decarboxylase signature 331 348 2.1E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 PRINTS PR01180 Arginine decarboxylase signature 490 515 2.1E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 PRINTS PR01180 Arginine decarboxylase signature 154 169 2.1E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 PRINTS PR01180 Arginine decarboxylase signature 204 226 2.1E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 PRINTS PR01180 Arginine decarboxylase signature 180 201 2.1E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 SUPERFAMILY SSF50621 459 564 9.42E-6 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TVD_01390 bf5d3582cbfaf4510df9efc5d79aff8f 634 Gene3D G3DSA:1.20.58.930 373 461 5.8E-214 T 11-10-2018 TVD_06485 a1635a04b71a250b655465f64048a189 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 205 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site TVD_06485 a1635a04b71a250b655465f64048a189 359 Gene3D G3DSA:3.40.640.10 17 249 1.5E-97 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_06485 a1635a04b71a250b655465f64048a189 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 358 8.6E-160 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 TVD_06485 a1635a04b71a250b655465f64048a189 359 Pfam PF00266 Aminotransferase class-V 4 347 5.3E-59 T 11-10-2018 IPR000192 Aminotransferase class V domain TVD_06485 a1635a04b71a250b655465f64048a189 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 358 52.527 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 TVD_06485 a1635a04b71a250b655465f64048a189 359 Gene3D G3DSA:3.90.1150.10 250 359 4.4E-44 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_06485 a1635a04b71a250b655465f64048a189 359 SUPERFAMILY SSF53383 1 357 1.29E-121 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_06485 a1635a04b71a250b655465f64048a189 359 PIRSF PIRSF000525 1 359 6.2E-157 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 Gene3D G3DSA:3.30.2090.10 177 267 4.5E-249 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 Gene3D G3DSA:3.30.2090.10 711 799 4.5E-249 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 SUPERFAMILY SSF82866 800 1034 9.42E-43 T 11-10-2018 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 SUPERFAMILY SSF82714 182 263 4.97E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 Gene3D G3DSA:1.20.1640.10 507 1026 4.5E-249 T 11-10-2018 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 Gene3D G3DSA:3.30.70.1430 41 807 4.5E-249 T 11-10-2018 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 Gene3D G3DSA:1.20.1640.10 14 506 4.5E-249 T 11-10-2018 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 Gene3D G3DSA:3.30.70.1320 134 324 4.5E-249 T 11-10-2018 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 Gene3D G3DSA:3.30.70.1440 660 857 4.5E-249 T 11-10-2018 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 SUPERFAMILY SSF82866 289 486 7.06E-33 T 11-10-2018 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 Gene3D G3DSA:3.30.70.1430 562 659 4.5E-249 T 11-10-2018 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 SUPERFAMILY SSF82693 41 134 1.64E-21 T 11-10-2018 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 9.3E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 9.3E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 9.3E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 9.3E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 9.3E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 9.3E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 Pfam PF00873 AcrB/AcrD/AcrF family 6 1030 6.2E-169 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_04560 07f94bfc8d4a0e64cae90d7d111e992c 1055 SUPERFAMILY SSF82693 136 320 1.64E-15 T 11-10-2018 TVD_11175 176cb4699fa3e08f29c459c0926b3f30 491 SMART SM00304 191 243 8.7E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_11175 176cb4699fa3e08f29c459c0926b3f30 491 SMART SM00387 373 483 3.2E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_11175 176cb4699fa3e08f29c459c0926b3f30 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 480 3.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_11175 176cb4699fa3e08f29c459c0926b3f30 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 3.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_11175 176cb4699fa3e08f29c459c0926b3f30 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 3.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_11175 176cb4699fa3e08f29c459c0926b3f30 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 440 3.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_11175 176cb4699fa3e08f29c459c0926b3f30 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 481 5.7E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_11175 176cb4699fa3e08f29c459c0926b3f30 491 Gene3D G3DSA:3.30.565.10 332 486 1.6E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_11175 176cb4699fa3e08f29c459c0926b3f30 491 SUPERFAMILY SSF47384 258 330 1.08E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TVD_11175 176cb4699fa3e08f29c459c0926b3f30 491 Gene3D G3DSA:1.10.287.130 259 331 1.7E-20 T 11-10-2018 TVD_11175 176cb4699fa3e08f29c459c0926b3f30 491 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 330 3.3E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_11175 176cb4699fa3e08f29c459c0926b3f30 491 SUPERFAMILY SSF103190 34 158 4.71E-6 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TVD_11175 176cb4699fa3e08f29c459c0926b3f30 491 Gene3D G3DSA:3.30.450.20 26 153 1.1E-5 T 11-10-2018 TVD_11175 176cb4699fa3e08f29c459c0926b3f30 491 SMART SM00388 267 333 3.2E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_11175 176cb4699fa3e08f29c459c0926b3f30 491 SUPERFAMILY SSF55874 323 481 1.57E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_09510 72b49f4795821e98fe89bd3196671f22 335 SUPERFAMILY SSF51735 1 333 1.26E-91 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_09510 72b49f4795821e98fe89bd3196671f22 335 Gene3D G3DSA:3.90.25.10 180 328 2.4E-97 T 11-10-2018 TVD_09510 72b49f4795821e98fe89bd3196671f22 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 237 9.0E-56 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TVD_09510 72b49f4795821e98fe89bd3196671f22 335 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.2E-30 T 11-10-2018 TVD_09510 72b49f4795821e98fe89bd3196671f22 335 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 1.2E-30 T 11-10-2018 TVD_09510 72b49f4795821e98fe89bd3196671f22 335 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.2E-30 T 11-10-2018 TVD_09510 72b49f4795821e98fe89bd3196671f22 335 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.2E-30 T 11-10-2018 TVD_09510 72b49f4795821e98fe89bd3196671f22 335 Gene3D G3DSA:3.40.50.720 4 316 2.4E-97 T 11-10-2018 TVD_04390 ef62a08892a35cfebf6b0c46f3143157 286 SMART SM00090 5 235 1.4E-21 T 11-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 TVD_04390 ef62a08892a35cfebf6b0c46f3143157 286 Gene3D G3DSA:1.10.510.10 132 244 5.8E-19 T 11-10-2018 TVD_04390 ef62a08892a35cfebf6b0c46f3143157 286 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 164 176 - T 11-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 TVD_04390 ef62a08892a35cfebf6b0c46f3143157 286 SUPERFAMILY SSF56112 19 236 2.91E-21 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily TVD_04390 ef62a08892a35cfebf6b0c46f3143157 286 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 11-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 TVD_04390 ef62a08892a35cfebf6b0c46f3143157 286 Pfam PF01163 RIO1 family 55 219 4.3E-40 T 11-10-2018 TVD_03940 8d3b90562c84df8725c0da6371a79789 598 Gene3D G3DSA:3.30.70.1450 316 389 3.4E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_03940 8d3b90562c84df8725c0da6371a79789 598 Gene3D G3DSA:3.30.70.1450 209 290 8.1E-11 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_03940 8d3b90562c84df8725c0da6371a79789 598 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 546 562 - T 11-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 TVD_03940 8d3b90562c84df8725c0da6371a79789 598 SUPERFAMILY SSF116726 314 394 7.06E-17 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_03940 8d3b90562c84df8725c0da6371a79789 598 Pfam PF02080 TrkA-C domain 213 282 2.2E-8 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TVD_03940 8d3b90562c84df8725c0da6371a79789 598 Pfam PF02080 TrkA-C domain 319 388 1.3E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TVD_03940 8d3b90562c84df8725c0da6371a79789 598 Pfam PF03600 Citrate transporter 10 545 1.1E-50 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 TVD_03940 8d3b90562c84df8725c0da6371a79789 598 SUPERFAMILY SSF116726 206 285 3.92E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_05600 bdd68183d25646c5921ccc5fb419754b 164 Pfam PF14437 MafB19-like deaminase 17 162 2.1E-28 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 TVD_05600 bdd68183d25646c5921ccc5fb419754b 164 Gene3D G3DSA:3.40.140.10 12 164 3.8E-56 T 11-10-2018 TVD_05600 bdd68183d25646c5921ccc5fb419754b 164 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 20 162 45.462 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 TVD_05600 bdd68183d25646c5921ccc5fb419754b 164 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 66 103 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TVD_05600 bdd68183d25646c5921ccc5fb419754b 164 SUPERFAMILY SSF53927 12 162 2.84E-52 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TVD_11305 5aba3c64ac1677fde7ed300b7dabb9ed 260 SUPERFAMILY SSF64438 15 255 1.58E-76 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic TVD_11305 5aba3c64ac1677fde7ed300b7dabb9ed 260 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 24 253 3.2E-78 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase TVD_11305 5aba3c64ac1677fde7ed300b7dabb9ed 260 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 30 254 6.7E-55 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase TVD_11305 5aba3c64ac1677fde7ed300b7dabb9ed 260 Gene3D G3DSA:3.60.140.10 6 257 5.4E-87 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily TVD_03155 980edcca47b3c8ea19c9aefc16345e56 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.455 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_03155 980edcca47b3c8ea19c9aefc16345e56 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.1E-42 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_03155 980edcca47b3c8ea19c9aefc16345e56 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 3.5E-42 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_03155 980edcca47b3c8ea19c9aefc16345e56 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_03155 980edcca47b3c8ea19c9aefc16345e56 103 SUPERFAMILY SSF141091 1 101 9.68E-40 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 Gene3D G3DSA:3.40.50.261 124 289 1.2E-73 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 PIRSF PIRSF001553 1 291 2.7E-132 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.3E-37 T 11-10-2018 TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.3E-37 T 11-10-2018 TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.3E-37 T 11-10-2018 TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.3E-37 T 11-10-2018 TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 287 9.4E-140 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 SUPERFAMILY SSF52210 123 285 5.89E-55 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 Gene3D G3DSA:3.40.50.720 2 123 1.8E-49 T 11-10-2018 TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 Pfam PF02629 CoA binding domain 6 99 3.7E-29 T 11-10-2018 IPR003781 CoA-binding GO:0048037 TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 SMART SM00881 4 100 9.7E-35 T 11-10-2018 IPR003781 CoA-binding GO:0048037 TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 SUPERFAMILY SSF51735 1 122 8.54E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 Pfam PF00549 CoA-ligase 151 271 8.3E-17 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 42.678 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TVD_11330 322b3f77f3a63ffd2965e3872abcfc1c 291 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site TVD_13545 5fadb6a3862c618afb7e22289873410b 280 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 27 199 4.0E-57 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 TVD_13545 5fadb6a3862c618afb7e22289873410b 280 Pfam PF02195 ParB-like nuclease domain 29 117 6.2E-26 T 11-10-2018 IPR003115 ParB/Sulfiredoxin TVD_13545 5fadb6a3862c618afb7e22289873410b 280 SMART SM00470 28 117 5.8E-35 T 11-10-2018 IPR003115 ParB/Sulfiredoxin TVD_13545 5fadb6a3862c618afb7e22289873410b 280 Gene3D G3DSA:1.10.10.2830 104 217 6.6E-36 T 11-10-2018 TVD_13545 5fadb6a3862c618afb7e22289873410b 280 SUPERFAMILY SSF110849 26 163 1.31E-32 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily TVD_13545 5fadb6a3862c618afb7e22289873410b 280 Gene3D G3DSA:3.90.1530.30 41 103 4.4E-28 T 11-10-2018 TVD_08230 2f44391b03ff4ded3f271bb09032c7d1 325 SMART SM00267 149 320 7.5E-54 T 11-10-2018 IPR000160 GGDEF domain TVD_08230 2f44391b03ff4ded3f271bb09032c7d1 325 Gene3D G3DSA:3.30.70.270 158 324 3.8E-54 T 11-10-2018 TVD_08230 2f44391b03ff4ded3f271bb09032c7d1 325 Pfam PF08448 PAS fold 27 149 1.1E-6 T 11-10-2018 IPR013656 PAS fold-4 TVD_08230 2f44391b03ff4ded3f271bb09032c7d1 325 SUPERFAMILY SSF55073 165 319 2.28E-45 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_08230 2f44391b03ff4ded3f271bb09032c7d1 325 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 159 319 1.3E-44 T 11-10-2018 IPR000160 GGDEF domain TVD_08230 2f44391b03ff4ded3f271bb09032c7d1 325 Pfam PF00990 Diguanylate cyclase, GGDEF domain 160 316 1.3E-44 T 11-10-2018 IPR000160 GGDEF domain TVD_08230 2f44391b03ff4ded3f271bb09032c7d1 325 SUPERFAMILY SSF55785 12 102 7.5E-9 T 11-10-2018 IPR035965 PAS domain superfamily TVD_08230 2f44391b03ff4ded3f271bb09032c7d1 325 Gene3D G3DSA:3.30.450.20 8 157 6.1E-13 T 11-10-2018 TVD_06570 6432b5e17c52121d34722b8d1077de54 184 ProSitePatterns PS00893 Nudix box signature. 71 92 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TVD_06570 6432b5e17c52121d34722b8d1077de54 184 SUPERFAMILY SSF55811 13 161 2.84E-40 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TVD_06570 6432b5e17c52121d34722b8d1077de54 184 Gene3D G3DSA:3.90.79.10 37 172 1.0E-37 T 11-10-2018 TVD_06570 6432b5e17c52121d34722b8d1077de54 184 Gene3D G3DSA:2.20.70.10 10 36 4.1E-7 T 11-10-2018 TVD_06570 6432b5e17c52121d34722b8d1077de54 184 Pfam PF14803 Nudix N-terminal 13 36 1.8E-8 T 11-10-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 TVD_06570 6432b5e17c52121d34722b8d1077de54 184 Pfam PF00293 NUDIX domain 41 146 3.4E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TVD_01140 29cb859839cd06ee1f30d7fd33ab3ff6 153 Pfam PF00692 dUTPase 19 151 3.4E-34 T 11-10-2018 IPR029054 dUTPase-like TVD_01140 29cb859839cd06ee1f30d7fd33ab3ff6 153 SUPERFAMILY SSF51283 6 152 2.75E-51 T 11-10-2018 IPR036157 dUTPase-like superfamily TVD_01140 29cb859839cd06ee1f30d7fd33ab3ff6 153 TIGRFAM TIGR00576 dut: dUTP diphosphatase 13 152 2.1E-45 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 TVD_01140 29cb859839cd06ee1f30d7fd33ab3ff6 153 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 8 152 31.876 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 TVD_01140 29cb859839cd06ee1f30d7fd33ab3ff6 153 Gene3D G3DSA:2.70.40.10 2 152 1.8E-50 T 11-10-2018 IPR036157 dUTPase-like superfamily TVD_05070 ac4ea52fbdf836778edb23228e3abef9 633 Pfam PF02719 Polysaccharide biosynthesis protein 288 581 9.3E-123 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain TVD_05070 ac4ea52fbdf836778edb23228e3abef9 633 Gene3D G3DSA:3.40.50.720 283 621 5.6E-112 T 11-10-2018 TVD_05070 ac4ea52fbdf836778edb23228e3abef9 633 Pfam PF13727 CoA-binding domain 85 243 7.2E-10 T 11-10-2018 TVD_05070 ac4ea52fbdf836778edb23228e3abef9 633 Gene3D G3DSA:3.40.50.720 147 269 2.0E-31 T 11-10-2018 TVD_05070 ac4ea52fbdf836778edb23228e3abef9 633 SUPERFAMILY SSF53335 116 353 2.82E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_05070 ac4ea52fbdf836778edb23228e3abef9 633 SUPERFAMILY SSF51735 286 560 3.81E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_03365 3a9c312b74adf9897b95bc7fe2fc236f 777 Gene3D G3DSA:3.30.980.40 282 386 3.8E-32 T 11-10-2018 TVD_03365 3a9c312b74adf9897b95bc7fe2fc236f 777 SUPERFAMILY SSF52540 364 676 3.87E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_03365 3a9c312b74adf9897b95bc7fe2fc236f 777 Gene3D G3DSA:1.10.10.10 707 771 1.6E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_03365 3a9c312b74adf9897b95bc7fe2fc236f 777 Gene3D G3DSA:3.40.50.300 387 690 1.4E-119 T 11-10-2018 TVD_03365 3a9c312b74adf9897b95bc7fe2fc236f 777 Pfam PF01580 FtsK/SpoIIIE family 390 604 6.2E-67 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 TVD_03365 3a9c312b74adf9897b95bc7fe2fc236f 777 SMART SM00843 710 775 2.9E-37 T 11-10-2018 IPR018541 FtsK gamma domain TVD_03365 3a9c312b74adf9897b95bc7fe2fc236f 777 SUPERFAMILY SSF46785 710 774 7.43E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_03365 3a9c312b74adf9897b95bc7fe2fc236f 777 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 32 202 5.4E-37 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region TVD_03365 3a9c312b74adf9897b95bc7fe2fc236f 777 Pfam PF09397 Ftsk gamma domain 712 772 2.5E-27 T 11-10-2018 IPR018541 FtsK gamma domain TVD_04915 25ab1dff1ce2790874eb2cb1545ea0b7 377 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 8 358 2.8E-138 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 TVD_04915 25ab1dff1ce2790874eb2cb1545ea0b7 377 Pfam PF04055 Radical SAM superfamily 112 279 3.5E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TVD_04915 25ab1dff1ce2790874eb2cb1545ea0b7 377 Gene3D G3DSA:3.20.20.70 70 339 3.3E-108 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_04915 25ab1dff1ce2790874eb2cb1545ea0b7 377 Gene3D G3DSA:1.10.150.530 9 69 1.4E-22 T 11-10-2018 TVD_04915 25ab1dff1ce2790874eb2cb1545ea0b7 377 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 8 354 74.714 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 TVD_04915 25ab1dff1ce2790874eb2cb1545ea0b7 377 PIRSF PIRSF006004 5 366 9.2E-146 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 TVD_04915 25ab1dff1ce2790874eb2cb1545ea0b7 377 SUPERFAMILY SSF102114 103 331 1.96E-17 T 11-10-2018 TVD_00150 85bb2cb9907b808125b271436862fe15 449 Gene3D G3DSA:2.30.42.10 257 360 1.3E-26 T 11-10-2018 TVD_00150 85bb2cb9907b808125b271436862fe15 449 Gene3D G3DSA:2.30.42.10 361 449 4.0E-17 T 11-10-2018 TVD_00150 85bb2cb9907b808125b271436862fe15 449 Pfam PF13365 Trypsin-like peptidase domain 88 223 2.0E-32 T 11-10-2018 TVD_00150 85bb2cb9907b808125b271436862fe15 449 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 35 447 5.7E-141 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 TVD_00150 85bb2cb9907b808125b271436862fe15 449 Pfam PF13180 PDZ domain 372 444 3.7E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_00150 85bb2cb9907b808125b271436862fe15 449 Pfam PF13180 PDZ domain 262 348 1.5E-15 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_00150 85bb2cb9907b808125b271436862fe15 449 SMART SM00228 369 441 6.5E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_00150 85bb2cb9907b808125b271436862fe15 449 SMART SM00228 262 344 1.3E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_00150 85bb2cb9907b808125b271436862fe15 449 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 6.9E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_00150 85bb2cb9907b808125b271436862fe15 449 PRINTS PR00834 HtrA/DegQ protease family signature 159 183 6.9E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_00150 85bb2cb9907b808125b271436862fe15 449 PRINTS PR00834 HtrA/DegQ protease family signature 98 110 6.9E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_00150 85bb2cb9907b808125b271436862fe15 449 PRINTS PR00834 HtrA/DegQ protease family signature 119 139 6.9E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_00150 85bb2cb9907b808125b271436862fe15 449 PRINTS PR00834 HtrA/DegQ protease family signature 194 211 6.9E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_00150 85bb2cb9907b808125b271436862fe15 449 PRINTS PR00834 HtrA/DegQ protease family signature 302 314 6.9E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_00150 85bb2cb9907b808125b271436862fe15 449 SUPERFAMILY SSF50156 379 448 1.04E-14 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TVD_00150 85bb2cb9907b808125b271436862fe15 449 Gene3D G3DSA:2.40.10.120 33 255 4.7E-83 T 11-10-2018 TVD_00150 85bb2cb9907b808125b271436862fe15 449 SUPERFAMILY SSF50156 220 344 1.58E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TVD_00150 85bb2cb9907b808125b271436862fe15 449 SUPERFAMILY SSF50494 33 252 3.22E-64 T 11-10-2018 IPR009003 Peptidase S1, PA clan TVD_04875 4511d8a761859d2769ad41fa7caa2c8d 407 Gene3D G3DSA:3.90.1150.10 8 379 1.4E-158 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_04875 4511d8a761859d2769ad41fa7caa2c8d 407 SUPERFAMILY SSF53383 8 394 3.82E-111 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_04875 4511d8a761859d2769ad41fa7caa2c8d 407 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 4 407 2.1E-223 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 TVD_04875 4511d8a761859d2769ad41fa7caa2c8d 407 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 4 398 52.877 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 TVD_04875 4511d8a761859d2769ad41fa7caa2c8d 407 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 200 219 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site TVD_04875 4511d8a761859d2769ad41fa7caa2c8d 407 Pfam PF00266 Aminotransferase class-V 8 370 7.8E-84 T 11-10-2018 IPR000192 Aminotransferase class V domain TVD_04875 4511d8a761859d2769ad41fa7caa2c8d 407 PIRSF PIRSF005572 5 387 9.9E-129 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 TVD_04875 4511d8a761859d2769ad41fa7caa2c8d 407 Gene3D G3DSA:3.40.640.10 19 265 1.4E-158 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_09005 6e0ee545dc931ab880900d4ca696a083 507 SUPERFAMILY SSF52218 2 193 2.38E-53 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TVD_09005 6e0ee545dc931ab880900d4ca696a083 507 Pfam PF01040 UbiA prenyltransferase family 223 474 4.8E-22 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 TVD_09005 6e0ee545dc931ab880900d4ca696a083 507 Pfam PF02525 Flavodoxin-like fold 2 185 2.9E-38 T 11-10-2018 IPR003680 Flavodoxin-like fold TVD_09005 6e0ee545dc931ab880900d4ca696a083 507 Gene3D G3DSA:3.40.50.360 2 205 2.7E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TVD_02480 e722677bc506e8e26f1611e8f4fc0af0 329 SUPERFAMILY SSF55257 4 231 3.34E-30 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02480 e722677bc506e8e26f1611e8f4fc0af0 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 152 1.2E-24 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02480 e722677bc506e8e26f1611e8f4fc0af0 329 SUPERFAMILY SSF47789 249 322 1.27E-24 T 11-10-2018 TVD_02480 e722677bc506e8e26f1611e8f4fc0af0 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 27 225 1.3E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02480 e722677bc506e8e26f1611e8f4fc0af0 329 Gene3D G3DSA:3.30.1360.10 15 225 3.0E-82 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02480 e722677bc506e8e26f1611e8f4fc0af0 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 3 315 35.466 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02480 e722677bc506e8e26f1611e8f4fc0af0 329 SMART SM00662 21 232 2.3E-88 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02480 e722677bc506e8e26f1611e8f4fc0af0 329 Gene3D G3DSA:2.170.120.12 51 175 3.0E-82 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02480 e722677bc506e8e26f1611e8f4fc0af0 329 Gene3D G3DSA:1.10.150.20 245 327 1.6E-34 T 11-10-2018 TVD_02480 e722677bc506e8e26f1611e8f4fc0af0 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 22 314 4.3E-107 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02480 e722677bc506e8e26f1611e8f4fc0af0 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 250 306 5.8E-22 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02480 e722677bc506e8e26f1611e8f4fc0af0 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 327 1.0E-31 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02480 e722677bc506e8e26f1611e8f4fc0af0 329 SUPERFAMILY SSF56553 51 176 2.35E-41 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02485 121eb9541217d208ae2003e084a609aa 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.167 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02485 121eb9541217d208ae2003e084a609aa 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02485 121eb9541217d208ae2003e084a609aa 129 Pfam PF01196 Ribosomal protein L17 22 116 2.1E-32 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02485 121eb9541217d208ae2003e084a609aa 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 8.3E-46 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02485 121eb9541217d208ae2003e084a609aa 129 SUPERFAMILY SSF64263 1 119 2.75E-49 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02485 121eb9541217d208ae2003e084a609aa 129 Gene3D G3DSA:3.90.1030.10 1 117 1.5E-45 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_03475 3c6d33d7778c1032a882cefef00661dc 90 Gene3D G3DSA:2.60.120.10 1 89 1.1E-35 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TVD_03475 3c6d33d7778c1032a882cefef00661dc 90 Pfam PF05899 Protein of unknown function (DUF861) 15 87 7.9E-31 T 11-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 TVD_03475 3c6d33d7778c1032a882cefef00661dc 90 SUPERFAMILY SSF51182 12 87 6.03E-19 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TVD_06415 edfb8469d1fe87fe7340fcece1d04225 326 SUPERFAMILY SSF55174 21 72 6.15E-8 T 11-10-2018 TVD_06415 edfb8469d1fe87fe7340fcece1d04225 326 Gene3D G3DSA:3.30.2350.10 93 321 4.8E-60 T 11-10-2018 TVD_06415 edfb8469d1fe87fe7340fcece1d04225 326 Pfam PF01479 S4 domain 22 68 1.7E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_06415 edfb8469d1fe87fe7340fcece1d04225 326 SMART SM00363 22 84 4.6E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_06415 edfb8469d1fe87fe7340fcece1d04225 326 Gene3D G3DSA:3.10.290.10 10 73 2.9E-14 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TVD_06415 edfb8469d1fe87fe7340fcece1d04225 326 SUPERFAMILY SSF55120 92 319 1.41E-52 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_06415 edfb8469d1fe87fe7340fcece1d04225 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 18 318 1.1E-66 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_06415 edfb8469d1fe87fe7340fcece1d04225 326 Pfam PF00849 RNA pseudouridylate synthase 101 254 6.6E-22 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_02150 b9eacef3108415b78f15e3b84167174f 571 Pfam PF00905 Penicillin binding protein transpeptidase domain 245 542 3.9E-75 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TVD_02150 b9eacef3108415b78f15e3b84167174f 571 Gene3D G3DSA:3.30.450.330 221 547 3.2E-112 T 11-10-2018 TVD_02150 b9eacef3108415b78f15e3b84167174f 571 SUPERFAMILY SSF56519 51 219 1.1E-42 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 TVD_02150 b9eacef3108415b78f15e3b84167174f 571 Gene3D G3DSA:3.40.710.10 281 464 3.2E-112 T 11-10-2018 TVD_02150 b9eacef3108415b78f15e3b84167174f 571 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 203 7.2E-19 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 TVD_02150 b9eacef3108415b78f15e3b84167174f 571 Gene3D G3DSA:3.90.1310.30 48 219 1.6E-45 T 11-10-2018 TVD_02150 b9eacef3108415b78f15e3b84167174f 571 SUPERFAMILY SSF56601 171 561 4.35E-94 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TVD_02150 b9eacef3108415b78f15e3b84167174f 571 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 8 558 42.398 T 11-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TVD_11625 fa49402e9e651ef6898d5eb24eda3191 690 SMART SM00052 439 684 6.1E-36 T 11-10-2018 IPR001633 EAL domain TVD_11625 fa49402e9e651ef6898d5eb24eda3191 690 SMART SM00091 141 207 6.8E-4 T 11-10-2018 IPR000014 PAS domain TVD_11625 fa49402e9e651ef6898d5eb24eda3191 690 Pfam PF00989 PAS fold 144 237 3.2E-7 T 11-10-2018 IPR013767 PAS fold GO:0006355 TVD_11625 fa49402e9e651ef6898d5eb24eda3191 690 SUPERFAMILY SSF55785 131 237 3.81E-13 T 11-10-2018 IPR035965 PAS domain superfamily TVD_11625 fa49402e9e651ef6898d5eb24eda3191 690 SUPERFAMILY SSF55073 272 428 1.18E-27 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_11625 fa49402e9e651ef6898d5eb24eda3191 690 Gene3D G3DSA:3.30.450.20 129 250 2.1E-14 T 11-10-2018 TVD_11625 fa49402e9e651ef6898d5eb24eda3191 690 SMART SM00267 255 427 1.1E-13 T 11-10-2018 IPR000160 GGDEF domain TVD_11625 fa49402e9e651ef6898d5eb24eda3191 690 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 264 422 5.7E-20 T 11-10-2018 IPR000160 GGDEF domain TVD_11625 fa49402e9e651ef6898d5eb24eda3191 690 SUPERFAMILY SSF141868 447 685 1.02E-54 T 11-10-2018 IPR035919 EAL domain superfamily TVD_11625 fa49402e9e651ef6898d5eb24eda3191 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 137 238 4.4E-9 T 11-10-2018 IPR000014 PAS domain TVD_11625 fa49402e9e651ef6898d5eb24eda3191 690 Pfam PF00563 EAL domain 446 679 1.6E-50 T 11-10-2018 IPR001633 EAL domain TVD_11625 fa49402e9e651ef6898d5eb24eda3191 690 Pfam PF00990 Diguanylate cyclase, GGDEF domain 267 421 3.0E-26 T 11-10-2018 IPR000160 GGDEF domain TVD_11625 fa49402e9e651ef6898d5eb24eda3191 690 Gene3D G3DSA:3.20.20.450 428 688 5.9E-62 T 11-10-2018 IPR035919 EAL domain superfamily TVD_11625 fa49402e9e651ef6898d5eb24eda3191 690 Gene3D G3DSA:3.30.70.270 257 427 2.1E-36 T 11-10-2018 TVD_00360 89c4c37415af964a029a1a650e5c20a1 405 SUPERFAMILY SSF53756 2 395 1.08E-78 T 11-10-2018 TVD_00360 89c4c37415af964a029a1a650e5c20a1 405 TIGRFAM TIGR04063 stp3: PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family 2 395 3.9E-202 T 11-10-2018 IPR024004 Glycosyltransferase family 1, Daro2409 family TVD_00360 89c4c37415af964a029a1a650e5c20a1 405 Pfam PF13579 Glycosyl transferase 4-like domain 15 187 4.8E-25 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TVD_00360 89c4c37415af964a029a1a650e5c20a1 405 Gene3D G3DSA:3.40.50.2000 189 375 1.9E-72 T 11-10-2018 TVD_00360 89c4c37415af964a029a1a650e5c20a1 405 Pfam PF00534 Glycosyl transferases group 1 206 371 1.1E-32 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TVD_00360 89c4c37415af964a029a1a650e5c20a1 405 Gene3D G3DSA:3.40.50.2000 7 392 1.9E-72 T 11-10-2018 TVD_04725 005cb443c9abc6c75d5c00f56f0270d3 466 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 265 309 2.4E-4 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TVD_04725 005cb443c9abc6c75d5c00f56f0270d3 466 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 19 83 2.0E-15 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TVD_04725 005cb443c9abc6c75d5c00f56f0270d3 466 Gene3D G3DSA:3.30.413.10 92 248 3.5E-43 T 11-10-2018 TVD_04725 005cb443c9abc6c75d5c00f56f0270d3 466 TIGRFAM TIGR02435 CobG: precorrin-3B synthase 9 392 2.8E-81 T 11-10-2018 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like TVD_04725 005cb443c9abc6c75d5c00f56f0270d3 466 SUPERFAMILY SSF56014 95 229 5.1E-16 T 11-10-2018 TVD_04725 005cb443c9abc6c75d5c00f56f0270d3 466 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 93 224 9.3E-5 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TVD_04725 005cb443c9abc6c75d5c00f56f0270d3 466 SUPERFAMILY SSF55124 4 88 6.83E-23 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TVD_04725 005cb443c9abc6c75d5c00f56f0270d3 466 Gene3D G3DSA:3.90.480.10 26 306 3.5E-43 T 11-10-2018 TVD_04725 005cb443c9abc6c75d5c00f56f0270d3 466 SUPERFAMILY SSF55124 190 313 1.61E-10 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TVD_12025 4048c6f99cfa4d57127ec6711d7b47ea 651 Pfam PF00989 PAS fold 351 394 1.8E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 TVD_12025 4048c6f99cfa4d57127ec6711d7b47ea 651 Gene3D G3DSA:3.30.450.20 337 472 1.9E-15 T 11-10-2018 TVD_12025 4048c6f99cfa4d57127ec6711d7b47ea 651 Pfam PF00990 Diguanylate cyclase, GGDEF domain 479 635 1.5E-41 T 11-10-2018 IPR000160 GGDEF domain TVD_12025 4048c6f99cfa4d57127ec6711d7b47ea 651 SMART SM00091 349 415 1.7E-6 T 11-10-2018 IPR000014 PAS domain TVD_12025 4048c6f99cfa4d57127ec6711d7b47ea 651 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 36 283 1.2E-36 T 11-10-2018 TVD_12025 4048c6f99cfa4d57127ec6711d7b47ea 651 SUPERFAMILY SSF55073 484 638 8.63E-45 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_12025 4048c6f99cfa4d57127ec6711d7b47ea 651 SUPERFAMILY SSF55785 340 466 6.63E-14 T 11-10-2018 IPR035965 PAS domain superfamily TVD_12025 4048c6f99cfa4d57127ec6711d7b47ea 651 Gene3D G3DSA:3.40.190.10 122 243 3.1E-20 T 11-10-2018 TVD_12025 4048c6f99cfa4d57127ec6711d7b47ea 651 SMART SM00267 468 640 2.2E-56 T 11-10-2018 IPR000160 GGDEF domain TVD_12025 4048c6f99cfa4d57127ec6711d7b47ea 651 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 477 639 2.4E-42 T 11-10-2018 IPR000160 GGDEF domain TVD_12025 4048c6f99cfa4d57127ec6711d7b47ea 651 Gene3D G3DSA:3.40.190.10 36 270 3.1E-20 T 11-10-2018 TVD_12025 4048c6f99cfa4d57127ec6711d7b47ea 651 SUPERFAMILY SSF53850 33 276 3.73E-13 T 11-10-2018 TVD_12025 4048c6f99cfa4d57127ec6711d7b47ea 651 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 350 472 1.2E-9 T 11-10-2018 IPR000014 PAS domain TVD_12025 4048c6f99cfa4d57127ec6711d7b47ea 651 Gene3D G3DSA:3.30.70.270 473 645 8.6E-53 T 11-10-2018 TVD_00585 4627f40bf2c78e7eec245493a0e44d45 67 PRINTS PR00050 Cold shock protein signature 4 19 4.4E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TVD_00585 4627f40bf2c78e7eec245493a0e44d45 67 PRINTS PR00050 Cold shock protein signature 40 58 4.4E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TVD_00585 4627f40bf2c78e7eec245493a0e44d45 67 PRINTS PR00050 Cold shock protein signature 25 34 4.4E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TVD_00585 4627f40bf2c78e7eec245493a0e44d45 67 SUPERFAMILY SSF50249 2 66 1.03E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_00585 4627f40bf2c78e7eec245493a0e44d45 67 PIRSF PIRSF002599 1 67 7.6E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 TVD_00585 4627f40bf2c78e7eec245493a0e44d45 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-10-2018 IPR019844 Cold-shock conserved site TVD_00585 4627f40bf2c78e7eec245493a0e44d45 67 SMART SM00357 3 67 1.3E-28 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 TVD_00585 4627f40bf2c78e7eec245493a0e44d45 67 Gene3D G3DSA:2.40.50.140 2 67 1.6E-29 T 11-10-2018 TVD_00585 4627f40bf2c78e7eec245493a0e44d45 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 4.5E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TVD_07280 acbc496183d30e7c8ab41398283532e7 289 Hamap MF_00050 Elongation factor Ts [tsf]. 1 286 79.736 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TVD_07280 acbc496183d30e7c8ab41398283532e7 289 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TVD_07280 acbc496183d30e7c8ab41398283532e7 289 Gene3D G3DSA:3.30.479.20 56 146 1.8E-24 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TVD_07280 acbc496183d30e7c8ab41398283532e7 289 Gene3D G3DSA:1.10.8.10 1 55 7.8E-26 T 11-10-2018 TVD_07280 acbc496183d30e7c8ab41398283532e7 289 Pfam PF00889 Elongation factor TS 70 269 3.4E-71 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 TVD_07280 acbc496183d30e7c8ab41398283532e7 289 Gene3D G3DSA:1.10.286.20 188 234 2.4E-45 T 11-10-2018 TVD_07280 acbc496183d30e7c8ab41398283532e7 289 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 286 5.4E-109 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TVD_07280 acbc496183d30e7c8ab41398283532e7 289 SUPERFAMILY SSF54713 148 287 7.72E-54 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TVD_07280 acbc496183d30e7c8ab41398283532e7 289 Gene3D G3DSA:3.30.479.20 152 268 2.4E-45 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TVD_07280 acbc496183d30e7c8ab41398283532e7 289 SUPERFAMILY SSF54713 55 143 9.16E-20 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 TVD_07280 acbc496183d30e7c8ab41398283532e7 289 SUPERFAMILY SSF46934 1 55 5.83E-19 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 TVD_03680 a22644e3ed35984d3d16d29968b1ae3e 155 Pfam PF02033 Ribosome-binding factor A 9 112 1.7E-32 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TVD_03680 a22644e3ed35984d3d16d29968b1ae3e 155 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 8 112 26.766 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TVD_03680 a22644e3ed35984d3d16d29968b1ae3e 155 SUPERFAMILY SSF89919 6 114 4.06E-35 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily TVD_03680 a22644e3ed35984d3d16d29968b1ae3e 155 Gene3D G3DSA:3.30.300.20 4 106 4.4E-36 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TVD_03680 a22644e3ed35984d3d16d29968b1ae3e 155 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 12 99 9.0E-26 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TVD_03680 a22644e3ed35984d3d16d29968b1ae3e 155 ProSitePatterns PS01319 Ribosome-binding factor A signature. 78 99 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 TVD_03680 a22644e3ed35984d3d16d29968b1ae3e 155 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 8 114 2.2E-32 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 TVD_02105 d04127cb5206eceed3f5fa5db214ab60 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 2.3E-16 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TVD_02105 d04127cb5206eceed3f5fa5db214ab60 208 SUPERFAMILY SSF52833 11 110 6.56E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_02105 d04127cb5206eceed3f5fa5db214ab60 208 Gene3D G3DSA:1.20.1050.10 89 192 2.1E-72 T 11-10-2018 TVD_02105 d04127cb5206eceed3f5fa5db214ab60 208 Gene3D G3DSA:3.40.30.10 11 201 2.1E-72 T 11-10-2018 TVD_02105 d04127cb5206eceed3f5fa5db214ab60 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 129 193 9.6E-5 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal TVD_02105 d04127cb5206eceed3f5fa5db214ab60 208 SUPERFAMILY SSF47616 82 206 3.41E-20 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TVD_00595 4b085c10b9d32bd4506afc941b1ae758 719 SMART SM00052 460 706 4.5E-123 T 11-10-2018 IPR001633 EAL domain TVD_00595 4b085c10b9d32bd4506afc941b1ae758 719 SUPERFAMILY SSF55785 16 119 1.31E-8 T 11-10-2018 IPR035965 PAS domain superfamily TVD_00595 4b085c10b9d32bd4506afc941b1ae758 719 Pfam PF00563 EAL domain 466 701 6.5E-77 T 11-10-2018 IPR001633 EAL domain TVD_00595 4b085c10b9d32bd4506afc941b1ae758 719 Pfam PF00990 Diguanylate cyclase, GGDEF domain 290 444 3.5E-43 T 11-10-2018 IPR000160 GGDEF domain TVD_00595 4b085c10b9d32bd4506afc941b1ae758 719 Gene3D G3DSA:3.20.20.450 462 714 1.5E-106 T 11-10-2018 IPR035919 EAL domain superfamily TVD_00595 4b085c10b9d32bd4506afc941b1ae758 719 Gene3D G3DSA:3.30.70.270 291 461 7.5E-52 T 11-10-2018 TVD_00595 4b085c10b9d32bd4506afc941b1ae758 719 Gene3D G3DSA:3.30.450.20 156 274 7.7E-16 T 11-10-2018 TVD_00595 4b085c10b9d32bd4506afc941b1ae758 719 SMART SM00267 278 450 5.4E-50 T 11-10-2018 IPR000160 GGDEF domain TVD_00595 4b085c10b9d32bd4506afc941b1ae758 719 SUPERFAMILY SSF55785 149 276 5.48E-12 T 11-10-2018 IPR035965 PAS domain superfamily TVD_00595 4b085c10b9d32bd4506afc941b1ae758 719 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 291 447 2.1E-32 T 11-10-2018 IPR000160 GGDEF domain TVD_00595 4b085c10b9d32bd4506afc941b1ae758 719 SMART SM00091 164 232 40.0 T 11-10-2018 IPR000014 PAS domain TVD_00595 4b085c10b9d32bd4506afc941b1ae758 719 SMART SM00091 11 79 0.0047 T 11-10-2018 IPR000014 PAS domain TVD_00595 4b085c10b9d32bd4506afc941b1ae758 719 SUPERFAMILY SSF141868 465 713 5.36E-94 T 11-10-2018 IPR035919 EAL domain superfamily TVD_00595 4b085c10b9d32bd4506afc941b1ae758 719 SUPERFAMILY SSF55073 294 452 1.02E-44 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_00595 4b085c10b9d32bd4506afc941b1ae758 719 Gene3D G3DSA:3.30.450.20 14 119 3.1E-8 T 11-10-2018 TVD_04520 7d3e95753fd83f91488455c2766b657e 160 Pfam PF00027 Cyclic nucleotide-binding domain 38 114 1.2E-11 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TVD_04520 7d3e95753fd83f91488455c2766b657e 160 SMART SM00100 15 136 9.0E-7 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TVD_04520 7d3e95753fd83f91488455c2766b657e 160 SUPERFAMILY SSF51206 8 143 5.11E-23 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like TVD_04520 7d3e95753fd83f91488455c2766b657e 160 Gene3D G3DSA:2.60.120.10 1 150 1.9E-22 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TVD_03165 4ed21a9c4ad7461495aa374e7f87373a 360 SUPERFAMILY SSF52540 161 336 1.49E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_03165 4ed21a9c4ad7461495aa374e7f87373a 360 Gene3D G3DSA:3.40.50.300 159 340 1.6E-48 T 11-10-2018 TVD_03165 4ed21a9c4ad7461495aa374e7f87373a 360 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 3.3E-140 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TVD_03165 4ed21a9c4ad7461495aa374e7f87373a 360 Gene3D G3DSA:2.70.210.12 1 158 1.3E-60 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily TVD_03165 4ed21a9c4ad7461495aa374e7f87373a 360 Hamap MF_01454 GTPase Obg [obg]. 2 334 47.26 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TVD_03165 4ed21a9c4ad7461495aa374e7f87373a 360 Pfam PF01018 GTP1/OBG 4 157 2.2E-58 T 11-10-2018 IPR006169 GTP1/OBG domain TVD_03165 4ed21a9c4ad7461495aa374e7f87373a 360 Pfam PF01926 50S ribosome-binding GTPase 161 285 6.7E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_03165 4ed21a9c4ad7461495aa374e7f87373a 360 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 TVD_03165 4ed21a9c4ad7461495aa374e7f87373a 360 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.0E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_03165 4ed21a9c4ad7461495aa374e7f87373a 360 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 2.0E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_03165 4ed21a9c4ad7461495aa374e7f87373a 360 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 2.0E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_03165 4ed21a9c4ad7461495aa374e7f87373a 360 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.0E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_03165 4ed21a9c4ad7461495aa374e7f87373a 360 PIRSF PIRSF002401 1 356 1.0E-130 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type TVD_03165 4ed21a9c4ad7461495aa374e7f87373a 360 SUPERFAMILY SSF82051 2 157 8.11E-56 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily TVD_06760 002e171939f2688e69ee128698123bc0 153 Gene3D G3DSA:3.90.79.10 6 149 9.4E-26 T 11-10-2018 TVD_06760 002e171939f2688e69ee128698123bc0 153 SUPERFAMILY SSF55811 3 138 2.98E-19 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TVD_06760 002e171939f2688e69ee128698123bc0 153 Pfam PF00293 NUDIX domain 9 115 9.3E-9 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TVD_00375 69f018ade0499dfc987c4bd47948d325 105 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 8 86 8.6E-33 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 TVD_00375 69f018ade0499dfc987c4bd47948d325 105 SUPERFAMILY SSF47413 12 95 1.36E-28 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TVD_00375 69f018ade0499dfc987c4bd47948d325 105 Gene3D G3DSA:1.10.260.40 5 105 1.9E-35 T 11-10-2018 TVD_00375 69f018ade0499dfc987c4bd47948d325 105 SMART SM00530 17 72 6.3E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TVD_00375 69f018ade0499dfc987c4bd47948d325 105 Pfam PF01381 Helix-turn-helix 19 72 3.1E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TVD_06930 1a69a9b7ace739346da94ede837d1d25 145 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 129 3.4E-33 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type TVD_06930 1a69a9b7ace739346da94ede837d1d25 145 Gene3D G3DSA:1.10.10.10 1 137 1.1E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_06930 1a69a9b7ace739346da94ede837d1d25 145 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site TVD_06930 1a69a9b7ace739346da94ede837d1d25 145 SUPERFAMILY SSF46785 2 130 1.05E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_06930 1a69a9b7ace739346da94ede837d1d25 145 Pfam PF02082 Transcriptional regulator 1 81 1.5E-24 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type TVD_11130 f664d8d154427f9bcc12de52661a82b8 1280 Pfam PF02754 Cysteine-rich domain 1145 1233 4.4E-4 T 11-10-2018 IPR004017 Cysteine-rich domain TVD_11130 f664d8d154427f9bcc12de52661a82b8 1280 Pfam PF02754 Cysteine-rich domain 1020 1108 1.6E-4 T 11-10-2018 IPR004017 Cysteine-rich domain TVD_11130 f664d8d154427f9bcc12de52661a82b8 1280 Pfam PF01565 FAD binding domain 166 307 2.9E-23 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TVD_11130 f664d8d154427f9bcc12de52661a82b8 1280 Gene3D G3DSA:3.30.70.2740 666 737 4.9E-7 T 11-10-2018 TVD_11130 f664d8d154427f9bcc12de52661a82b8 1280 Pfam PF11880 Domain of unknown function (DUF3400) 1236 1280 5.8E-22 T 11-10-2018 IPR021817 Protein of unknown function DUF3400 TVD_11130 f664d8d154427f9bcc12de52661a82b8 1280 Pfam PF13183 4Fe-4S dicluster domain 809 888 6.4E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TVD_11130 f664d8d154427f9bcc12de52661a82b8 1280 Pfam PF02913 FAD linked oxidases, C-terminal domain 682 773 8.7E-21 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 TVD_11130 f664d8d154427f9bcc12de52661a82b8 1280 Pfam PF02913 FAD linked oxidases, C-terminal domain 409 546 1.0E-6 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 TVD_11130 f664d8d154427f9bcc12de52661a82b8 1280 SUPERFAMILY SSF56176 127 395 9.81E-52 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TVD_11130 f664d8d154427f9bcc12de52661a82b8 1280 SUPERFAMILY SSF46548 792 904 1.4E-13 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_11130 f664d8d154427f9bcc12de52661a82b8 1280 SUPERFAMILY SSF55103 427 774 3.08E-36 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 TVD_11130 f664d8d154427f9bcc12de52661a82b8 1280 Pfam PF12447 Protein of unknown function (DUF3683) 5 116 6.5E-50 T 11-10-2018 IPR022153 Protein of unknown function DUF3683 TVD_11130 f664d8d154427f9bcc12de52661a82b8 1280 Gene3D G3DSA:3.30.465.40 126 320 8.7E-35 T 11-10-2018 TVD_07905 6857884d38c66b2acf40e93a1322cf19 139 Pfam PF00460 Flagella basal body rod protein 8 34 4.3E-8 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TVD_07905 6857884d38c66b2acf40e93a1322cf19 139 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TVD_07905 6857884d38c66b2acf40e93a1322cf19 139 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 138 1.4E-46 T 11-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 TVD_07905 6857884d38c66b2acf40e93a1322cf19 139 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 91 136 1.7E-10 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TVD_00880 779c0349577ab831312c7e4e67001f3b 282 Gene3D G3DSA:3.40.50.150 19 281 2.3E-66 T 11-10-2018 TVD_00880 779c0349577ab831312c7e4e67001f3b 282 SUPERFAMILY SSF53335 7 280 7.37E-57 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_00880 779c0349577ab831312c7e4e67001f3b 282 Pfam PF08241 Methyltransferase domain 71 171 2.0E-18 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TVD_00580 6543c369db642cff0cbd940a88f54f41 523 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 4 476 20.341 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TVD_00580 6543c369db642cff0cbd940a88f54f41 523 Pfam PF03023 MviN-like protein 30 478 1.3E-134 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TVD_00580 6543c369db642cff0cbd940a88f54f41 523 PRINTS PR01806 Virulence factor MviN signature 261 287 1.2E-82 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TVD_00580 6543c369db642cff0cbd940a88f54f41 523 PRINTS PR01806 Virulence factor MviN signature 34 53 1.2E-82 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TVD_00580 6543c369db642cff0cbd940a88f54f41 523 PRINTS PR01806 Virulence factor MviN signature 159 180 1.2E-82 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TVD_00580 6543c369db642cff0cbd940a88f54f41 523 PRINTS PR01806 Virulence factor MviN signature 359 378 1.2E-82 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TVD_00580 6543c369db642cff0cbd940a88f54f41 523 PRINTS PR01806 Virulence factor MviN signature 53 69 1.2E-82 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TVD_00580 6543c369db642cff0cbd940a88f54f41 523 PRINTS PR01806 Virulence factor MviN signature 135 159 1.2E-82 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TVD_00580 6543c369db642cff0cbd940a88f54f41 523 PRINTS PR01806 Virulence factor MviN signature 418 435 1.2E-82 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TVD_00580 6543c369db642cff0cbd940a88f54f41 523 PIRSF PIRSF002869 1 519 4.3E-156 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TVD_00580 6543c369db642cff0cbd940a88f54f41 523 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 511 7.7E-139 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ TVD_01710 4fff89c93a7673e3b28e1f82dd183b5c 451 SUPERFAMILY SSF53300 223 395 1.36E-20 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TVD_01710 4fff89c93a7673e3b28e1f82dd183b5c 451 SMART SM00327 223 395 2.3E-11 T 11-10-2018 IPR002035 von Willebrand factor, type A TVD_01710 4fff89c93a7673e3b28e1f82dd183b5c 451 Gene3D G3DSA:2.60.40.10 40 151 8.8E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold TVD_01710 4fff89c93a7673e3b28e1f82dd183b5c 451 Gene3D G3DSA:3.40.50.410 228 399 8.3E-24 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TVD_01710 4fff89c93a7673e3b28e1f82dd183b5c 451 Pfam PF00092 von Willebrand factor type A domain 228 393 7.8E-12 T 11-10-2018 IPR002035 von Willebrand factor, type A TVD_10135 6527f020b9e3d85bcc41329317e837cd 196 Gene3D G3DSA:1.20.120.1760 2 173 1.7E-7 T 11-10-2018 TVD_10135 6527f020b9e3d85bcc41329317e837cd 196 PIRSF PIRSF000847 4 182 5.6E-38 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 TVD_10135 6527f020b9e3d85bcc41329317e837cd 196 Pfam PF01066 CDP-alcohol phosphatidyltransferase 7 70 4.2E-13 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TVD_09635 6360af57b8bbf20bbbcbfb355ee66095 246 Pfam PF00581 Rhodanese-like domain 133 227 6.3E-12 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_09635 6360af57b8bbf20bbbcbfb355ee66095 246 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 30 117 4.6E-31 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TVD_09635 6360af57b8bbf20bbbcbfb355ee66095 246 SUPERFAMILY SSF54534 15 130 2.55E-39 T 11-10-2018 TVD_09635 6360af57b8bbf20bbbcbfb355ee66095 246 SUPERFAMILY SSF52821 119 230 2.62E-18 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_09635 6360af57b8bbf20bbbcbfb355ee66095 246 Gene3D G3DSA:3.40.250.10 128 243 3.0E-19 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_09635 6360af57b8bbf20bbbcbfb355ee66095 246 Gene3D G3DSA:3.10.50.40 3 123 2.9E-40 T 11-10-2018 TVD_09635 6360af57b8bbf20bbbcbfb355ee66095 246 SMART SM00450 125 232 2.1E-9 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_03430 9ac7673d7b17a8828fdb3aab8fbb4af5 896 SUPERFAMILY SSF53706 5 590 1.31E-183 T 11-10-2018 TVD_03430 9ac7673d7b17a8828fdb3aab8fbb4af5 896 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 6 59 1.8E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03430 9ac7673d7b17a8828fdb3aab8fbb4af5 896 Pfam PF00384 Molybdopterin oxidoreductase 73 487 9.2E-74 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03430 9ac7673d7b17a8828fdb3aab8fbb4af5 896 Gene3D G3DSA:1.10.10.1100 833 887 8.0E-10 T 11-10-2018 TVD_03430 9ac7673d7b17a8828fdb3aab8fbb4af5 896 SMART SM00926 5 61 6.5E-18 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03430 9ac7673d7b17a8828fdb3aab8fbb4af5 896 PIRSF PIRSF036643 1 723 3.0E-142 T 11-10-2018 TVD_03430 9ac7673d7b17a8828fdb3aab8fbb4af5 896 Gene3D G3DSA:3.40.228.10 141 571 3.7E-172 T 11-10-2018 TVD_03430 9ac7673d7b17a8828fdb3aab8fbb4af5 896 Gene3D G3DSA:2.20.25.90 2 62 1.1E-14 T 11-10-2018 TVD_03430 9ac7673d7b17a8828fdb3aab8fbb4af5 896 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 433 450 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 TVD_03430 9ac7673d7b17a8828fdb3aab8fbb4af5 896 Pfam PF01568 Molydopterin dinucleotide binding domain 588 698 3.5E-29 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 TVD_03430 9ac7673d7b17a8828fdb3aab8fbb4af5 896 Gene3D G3DSA:3.40.50.740 74 568 3.7E-172 T 11-10-2018 TVD_03430 9ac7673d7b17a8828fdb3aab8fbb4af5 896 Gene3D G3DSA:2.40.40.20 579 704 3.9E-39 T 11-10-2018 TVD_03430 9ac7673d7b17a8828fdb3aab8fbb4af5 896 SUPERFAMILY SSF50692 578 722 5.2E-44 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily TVD_03430 9ac7673d7b17a8828fdb3aab8fbb4af5 896 Pfam PF04324 BFD-like [2Fe-2S] binding domain 833 883 1.1E-13 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 Gene3D G3DSA:1.20.1370.20 449 548 1.1E-31 T 11-10-2018 TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 SUPERFAMILY SSF56634 18 528 1.07E-219 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 ProSitePatterns PS00438 Catalase proximal active site signature. 74 90 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 Pfam PF06628 Catalase-related immune-responsive 452 515 3.1E-17 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 Pfam PF01965 DJ-1/PfpI family 556 666 7.8E-10 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 SMART SM01060 38 426 1.3E-283 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 PRINTS PR00067 Catalase signature 135 152 1.8E-70 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 PRINTS PR00067 Catalase signature 323 350 1.8E-70 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 PRINTS PR00067 Catalase signature 154 172 1.8E-70 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 PRINTS PR00067 Catalase signature 355 381 1.8E-70 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 PRINTS PR00067 Catalase signature 51 74 1.8E-70 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 PRINTS PR00067 Catalase signature 114 132 1.8E-70 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 PIRSF PIRSF038927 7 709 0.0 T 11-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 Pfam PF00199 Catalase 38 422 1.5E-181 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 SUPERFAMILY SSF52317 552 666 7.63E-18 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 Gene3D G3DSA:2.40.180.10 2 446 1.8E-208 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TVD_03285 e4d06f06edf3fe274361b6098c74fa70 710 Gene3D G3DSA:3.40.50.880 549 707 1.1E-34 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_00725 9fb0fc3017b666a541087851d8704d10 455 SUPERFAMILY SSF53720 5 455 1.44E-143 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TVD_00725 9fb0fc3017b666a541087851d8704d10 455 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 256 267 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 TVD_00725 9fb0fc3017b666a541087851d8704d10 455 Pfam PF00171 Aldehyde dehydrogenase family 4 452 2.6E-139 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 TVD_00725 9fb0fc3017b666a541087851d8704d10 455 Gene3D G3DSA:3.40.309.10 232 421 7.6E-155 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 TVD_00725 9fb0fc3017b666a541087851d8704d10 455 Gene3D G3DSA:3.40.605.10 9 446 7.6E-155 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 TVD_01205 b047002ce64fce3672724bd1066cce4c 330 Gene3D G3DSA:3.20.20.70 10 246 1.3E-73 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_01205 b047002ce64fce3672724bd1066cce4c 330 Pfam PF01207 Dihydrouridine synthase (Dus) 15 302 3.7E-92 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TVD_01205 b047002ce64fce3672724bd1066cce4c 330 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 13 314 7.8E-102 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 TVD_01205 b047002ce64fce3672724bd1066cce4c 330 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 TVD_01205 b047002ce64fce3672724bd1066cce4c 330 PIRSF PIRSF006621 1 328 5.0E-96 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TVD_01205 b047002ce64fce3672724bd1066cce4c 330 SUPERFAMILY SSF51395 12 291 6.59E-80 T 11-10-2018 TVD_07300 002bf93988c432ed0527b3c26184e1c3 255 Pfam PF00691 OmpA family 106 219 1.6E-9 T 11-10-2018 IPR006665 OmpA-like domain TVD_07300 002bf93988c432ed0527b3c26184e1c3 255 Gene3D G3DSA:3.30.1330.60 50 233 4.8E-17 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_07300 002bf93988c432ed0527b3c26184e1c3 255 SUPERFAMILY SSF103088 103 227 3.92E-14 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_13685 770b09bb91e6bb2945fcf4428217d8b6 197 Gene3D G3DSA:3.30.230.40 1 91 1.8E-38 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 TVD_13685 770b09bb91e6bb2945fcf4428217d8b6 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 7.1E-66 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 TVD_13685 770b09bb91e6bb2945fcf4428217d8b6 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 TVD_13685 770b09bb91e6bb2945fcf4428217d8b6 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 42.987 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 TVD_13685 770b09bb91e6bb2945fcf4428217d8b6 197 SUPERFAMILY SSF54211 89 181 6.68E-35 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_13685 770b09bb91e6bb2945fcf4428217d8b6 197 SUPERFAMILY SSF54211 4 88 1.18E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_13685 770b09bb91e6bb2945fcf4428217d8b6 197 Gene3D G3DSA:3.30.230.40 92 197 2.6E-39 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 TVD_13685 770b09bb91e6bb2945fcf4428217d8b6 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 TVD_12800 66bec102577c4f135946183206225c84 335 Pfam PF00448 SRP54-type protein, GTPase domain 131 331 1.8E-76 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TVD_12800 66bec102577c4f135946183206225c84 335 SMART SM00962 130 331 4.4E-118 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TVD_12800 66bec102577c4f135946183206225c84 335 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 58 330 4.7E-107 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 TVD_12800 66bec102577c4f135946183206225c84 335 SUPERFAMILY SSF52540 81 328 1.27E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_12800 66bec102577c4f135946183206225c84 335 SMART SM00382 129 307 4.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_12800 66bec102577c4f135946183206225c84 335 Gene3D G3DSA:3.40.50.300 119 319 2.8E-111 T 11-10-2018 TVD_12800 66bec102577c4f135946183206225c84 335 SMART SM00963 36 115 2.5E-19 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TVD_12800 66bec102577c4f135946183206225c84 335 Pfam PF02881 SRP54-type protein, helical bundle domain 47 109 4.9E-11 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TVD_12800 66bec102577c4f135946183206225c84 335 Gene3D G3DSA:1.20.120.140 33 329 2.8E-111 T 11-10-2018 TVD_12800 66bec102577c4f135946183206225c84 335 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 58 331 62.832 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 TVD_12800 66bec102577c4f135946183206225c84 335 SUPERFAMILY SSF47364 31 107 4.49E-19 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 TVD_12800 66bec102577c4f135946183206225c84 335 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 304 317 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TVD_12355 67f84634a3e83fa55c91a2559b8f40e1 391 Gene3D G3DSA:3.90.1150.10 37 381 3.8E-136 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_12355 67f84634a3e83fa55c91a2559b8f40e1 391 Pfam PF00155 Aminotransferase class I and II 43 384 1.1E-64 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TVD_12355 67f84634a3e83fa55c91a2559b8f40e1 391 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 385 3.0E-142 T 11-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 TVD_12355 67f84634a3e83fa55c91a2559b8f40e1 391 Gene3D G3DSA:3.40.640.10 57 292 3.8E-136 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_12355 67f84634a3e83fa55c91a2559b8f40e1 391 SUPERFAMILY SSF53383 6 390 3.29E-111 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_12355 67f84634a3e83fa55c91a2559b8f40e1 391 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 239 248 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 TVD_12355 67f84634a3e83fa55c91a2559b8f40e1 391 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 5 388 47.858 T 11-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 TVD_09285 27da1e2df5f766566ab86b0a064eccf3 253 SUPERFAMILY SSF51735 5 251 1.45E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_09285 27da1e2df5f766566ab86b0a064eccf3 253 Gene3D G3DSA:3.40.50.720 7 247 2.8E-39 T 11-10-2018 TVD_09285 27da1e2df5f766566ab86b0a064eccf3 253 Pfam PF00106 short chain dehydrogenase 5 200 9.6E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_09285 27da1e2df5f766566ab86b0a064eccf3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 5.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_09285 27da1e2df5f766566ab86b0a064eccf3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_09285 27da1e2df5f766566ab86b0a064eccf3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 5.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_12385 149283f001974f17406d09046dcd240b 141 SUPERFAMILY SSF57716 101 139 8.84E-8 T 11-10-2018 TVD_12385 149283f001974f17406d09046dcd240b 141 SUPERFAMILY SSF109635 11 100 4.97E-33 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily TVD_12385 149283f001974f17406d09046dcd240b 141 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 18 140 27.55 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 TVD_12385 149283f001974f17406d09046dcd240b 141 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 99 134 9.5E-11 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 TVD_12385 149283f001974f17406d09046dcd240b 141 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 22 130 1.6E-44 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 TVD_12385 149283f001974f17406d09046dcd240b 141 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 104 128 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site TVD_12385 149283f001974f17406d09046dcd240b 141 Gene3D G3DSA:1.20.120.910 10 140 2.2E-38 T 11-10-2018 TVD_06265 af1598112f9fd03f75be4ff580c3994d 459 SUPERFAMILY SSF52540 111 381 8.15E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06265 af1598112f9fd03f75be4ff580c3994d 459 SMART SM00382 176 359 9.1E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_06265 af1598112f9fd03f75be4ff580c3994d 459 Gene3D G3DSA:3.40.50.12240 33 456 2.4E-148 T 11-10-2018 TVD_06265 af1598112f9fd03f75be4ff580c3994d 459 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_06265 af1598112f9fd03f75be4ff580c3994d 459 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 164 375 2.9E-68 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_06265 af1598112f9fd03f75be4ff580c3994d 459 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 26 454 2.6E-165 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_04510 6871f18d774e5e82076c40ad8d7603f3 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 306 322 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TVD_04510 6871f18d774e5e82076c40ad8d7603f3 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 82 98 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TVD_04510 6871f18d774e5e82076c40ad8d7603f3 439 Gene3D G3DSA:1.20.1250.20 28 208 6.8E-20 T 11-10-2018 TVD_04510 6871f18d774e5e82076c40ad8d7603f3 439 Pfam PF07690 Major Facilitator Superfamily 31 214 3.0E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TVD_04510 6871f18d774e5e82076c40ad8d7603f3 439 Pfam PF07690 Major Facilitator Superfamily 266 433 5.1E-17 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TVD_04510 6871f18d774e5e82076c40ad8d7603f3 439 Gene3D G3DSA:1.20.1250.20 248 433 2.0E-25 T 11-10-2018 TVD_04510 6871f18d774e5e82076c40ad8d7603f3 439 SUPERFAMILY SSF103473 31 433 2.22E-55 T 11-10-2018 IPR036259 MFS transporter superfamily TVD_09885 2ca0bcb251aa787aa0c7c59cfd1e06ff 212 Gene3D G3DSA:2.40.128.110 38 212 5.1E-42 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily TVD_09885 2ca0bcb251aa787aa0c7c59cfd1e06ff 212 SUPERFAMILY SSF101874 38 212 3.01E-43 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily TVD_09885 2ca0bcb251aa787aa0c7c59cfd1e06ff 212 SMART SM00867 38 210 1.6E-46 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like TVD_09885 2ca0bcb251aa787aa0c7c59cfd1e06ff 212 Pfam PF04264 YceI-like domain 39 209 3.4E-34 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like TVD_11065 2da08f92ea0d436225a96ffcf2301d90 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.358 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 TVD_11065 2da08f92ea0d436225a96ffcf2301d90 178 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 TVD_11065 2da08f92ea0d436225a96ffcf2301d90 178 Gene3D G3DSA:3.90.80.10 1 175 1.4E-70 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 TVD_11065 2da08f92ea0d436225a96ffcf2301d90 178 Pfam PF00719 Inorganic pyrophosphatase 18 173 4.1E-55 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 TVD_11065 2da08f92ea0d436225a96ffcf2301d90 178 SUPERFAMILY SSF50324 4 175 4.32E-67 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 TVD_08400 10598ce9f419ca8b5f5854dab0137235 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 90 190 2.5E-41 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TVD_08400 10598ce9f419ca8b5f5854dab0137235 193 SUPERFAMILY SSF46609 1 88 8.77E-34 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TVD_08400 10598ce9f419ca8b5f5854dab0137235 193 Gene3D G3DSA:2.40.500.20 84 193 9.0E-46 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TVD_08400 10598ce9f419ca8b5f5854dab0137235 193 PRINTS PR01703 Manganese superoxide dismutase signature 66 79 8.7E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TVD_08400 10598ce9f419ca8b5f5854dab0137235 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 8.7E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TVD_08400 10598ce9f419ca8b5f5854dab0137235 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 8.7E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TVD_08400 10598ce9f419ca8b5f5854dab0137235 193 PRINTS PR01703 Manganese superoxide dismutase signature 119 127 8.7E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TVD_08400 10598ce9f419ca8b5f5854dab0137235 193 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 8.7E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TVD_08400 10598ce9f419ca8b5f5854dab0137235 193 PIRSF PIRSF000349 1 193 1.4E-86 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TVD_08400 10598ce9f419ca8b5f5854dab0137235 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TVD_08400 10598ce9f419ca8b5f5854dab0137235 193 SUPERFAMILY SSF54719 82 191 1.57E-45 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TVD_08400 10598ce9f419ca8b5f5854dab0137235 193 Gene3D G3DSA:1.10.287.990 20 83 1.0E-24 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TVD_08400 10598ce9f419ca8b5f5854dab0137235 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 83 5.2E-34 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 TVD_02070 0cc60d08e789a50dcff02f86826a9889 123 SUPERFAMILY SSF81296 28 121 1.19E-18 T 11-10-2018 IPR014756 Immunoglobulin E-set TVD_02070 0cc60d08e789a50dcff02f86826a9889 123 Pfam PF04234 CopC domain 32 121 3.4E-19 T 11-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 TVD_02070 0cc60d08e789a50dcff02f86826a9889 123 Gene3D G3DSA:2.60.40.1220 29 123 5.1E-16 T 11-10-2018 TVD_07900 75cddb7b6cf943010115b078997edba1 224 Pfam PF03963 Flagellar hook capping protein - N-terminal region 18 76 6.3E-22 T 11-10-2018 IPR005648 Flagellar hook capping protein TVD_07900 75cddb7b6cf943010115b078997edba1 224 Pfam PF13860 FlgD Ig-like domain 110 179 9.2E-16 T 11-10-2018 IPR025965 FlgD Ig-like domain TVD_07900 75cddb7b6cf943010115b078997edba1 224 Gene3D G3DSA:2.60.40.4070 102 188 9.0E-35 T 11-10-2018 TVD_07900 75cddb7b6cf943010115b078997edba1 224 Pfam PF13861 FlgD Tudor-like domain 85 220 2.7E-16 T 11-10-2018 IPR025963 FlgD Tudor-like domain TVD_07900 75cddb7b6cf943010115b078997edba1 224 Gene3D G3DSA:2.30.30.910 86 217 9.0E-35 T 11-10-2018 TVD_01805 f98736f111e01f78c2c5093501acaf51 355 PIRSF PIRSF019169 1 354 1.9E-117 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM TVD_01805 f98736f111e01f78c2c5093501acaf51 355 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 8 352 3.6E-106 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM TVD_01805 f98736f111e01f78c2c5093501acaf51 355 SUPERFAMILY SSF53067 193 353 1.38E-23 T 11-10-2018 TVD_01805 f98736f111e01f78c2c5093501acaf51 355 SUPERFAMILY SSF53067 53 174 8.68E-11 T 11-10-2018 TVD_01805 f98736f111e01f78c2c5093501acaf51 355 Gene3D G3DSA:3.30.420.40 189 317 1.8E-84 T 11-10-2018 TVD_01805 f98736f111e01f78c2c5093501acaf51 355 Gene3D G3DSA:3.30.1490.300 87 146 1.8E-84 T 11-10-2018 TVD_01805 f98736f111e01f78c2c5093501acaf51 355 Pfam PF11104 Type IV pilus assembly protein PilM; 13 352 1.3E-129 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM TVD_01805 f98736f111e01f78c2c5093501acaf51 355 Gene3D G3DSA:3.30.420.40 12 351 1.8E-84 T 11-10-2018 TVD_04625 2bbe363eb903aea6811d0ef9e64c8da8 363 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 98 339 4.3E-104 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 TVD_04625 2bbe363eb903aea6811d0ef9e64c8da8 363 Hamap MF_02040 Iron-sulfur cluster carrier protein. 93 341 38.136 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein TVD_04625 2bbe363eb903aea6811d0ef9e64c8da8 363 ProSitePatterns PS01215 Mrp family signature. 204 220 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 TVD_04625 2bbe363eb903aea6811d0ef9e64c8da8 363 Pfam PF01883 Iron-sulfur cluster assembly protein 6 79 6.7E-15 T 11-10-2018 IPR002744 MIP18 family-like TVD_04625 2bbe363eb903aea6811d0ef9e64c8da8 363 SUPERFAMILY SSF52540 90 325 4.12E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04625 2bbe363eb903aea6811d0ef9e64c8da8 363 Gene3D G3DSA:3.40.50.300 84 339 1.3E-85 T 11-10-2018 TVD_04625 2bbe363eb903aea6811d0ef9e64c8da8 363 SUPERFAMILY SSF117916 2 83 8.83E-14 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TVD_03000 79ab4ab5c21da72a84ae87d4f5d96349 947 Gene3D G3DSA:1.20.1440.90 280 427 2.6E-16 T 11-10-2018 TVD_03000 79ab4ab5c21da72a84ae87d4f5d96349 947 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 147 160 2.5E-59 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TVD_03000 79ab4ab5c21da72a84ae87d4f5d96349 947 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 590 610 2.5E-59 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TVD_03000 79ab4ab5c21da72a84ae87d4f5d96349 947 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 424 444 2.5E-59 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TVD_03000 79ab4ab5c21da72a84ae87d4f5d96349 947 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 264 279 2.5E-59 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TVD_03000 79ab4ab5c21da72a84ae87d4f5d96349 947 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 768 794 2.5E-59 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TVD_03000 79ab4ab5c21da72a84ae87d4f5d96349 947 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 200 216 2.5E-59 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TVD_03000 79ab4ab5c21da72a84ae87d4f5d96349 947 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 632 661 2.5E-59 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TVD_03000 79ab4ab5c21da72a84ae87d4f5d96349 947 Pfam PF00311 Phosphoenolpyruvate carboxylase 143 947 1.8E-285 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TVD_03000 79ab4ab5c21da72a84ae87d4f5d96349 947 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 3 947 17.273 T 11-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TVD_03000 79ab4ab5c21da72a84ae87d4f5d96349 947 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 148 159 - T 11-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TVD_03000 79ab4ab5c21da72a84ae87d4f5d96349 947 SUPERFAMILY SSF51621 19 947 2.67E-289 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TVD_03000 79ab4ab5c21da72a84ae87d4f5d96349 947 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 592 604 - T 11-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TVD_02815 ede93763f15115628317e30025380d2c 182 Gene3D G3DSA:3.40.30.10 18 182 2.8E-40 T 11-10-2018 TVD_02815 ede93763f15115628317e30025380d2c 182 SUPERFAMILY SSF52833 40 182 3.64E-38 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_02815 ede93763f15115628317e30025380d2c 182 PIRSF PIRSF000303 5 182 6.8E-50 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TVD_02815 ede93763f15115628317e30025380d2c 182 ProSitePatterns PS00460 Glutathione peroxidases active site. 52 67 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 TVD_02815 ede93763f15115628317e30025380d2c 182 Pfam PF00255 Glutathione peroxidase 42 137 3.3E-24 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TVD_02815 ede93763f15115628317e30025380d2c 182 PRINTS PR01011 Glutathione peroxidase family signature 85 101 4.6E-9 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TVD_02815 ede93763f15115628317e30025380d2c 182 PRINTS PR01011 Glutathione peroxidase family signature 144 153 4.6E-9 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TVD_02815 ede93763f15115628317e30025380d2c 182 PRINTS PR01011 Glutathione peroxidase family signature 50 67 4.6E-9 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TVD_09700 f42e4d237ea149dcc34270d050bf6ee9 443 Gene3D G3DSA:1.20.1250.20 238 441 3.5E-18 T 11-10-2018 TVD_09700 f42e4d237ea149dcc34270d050bf6ee9 443 SUPERFAMILY SSF103473 15 440 1.7E-38 T 11-10-2018 IPR036259 MFS transporter superfamily TVD_09700 f42e4d237ea149dcc34270d050bf6ee9 443 Gene3D G3DSA:1.20.1250.20 18 218 1.1E-10 T 11-10-2018 TVD_09700 f42e4d237ea149dcc34270d050bf6ee9 443 Pfam PF11700 Vacuole effluxer Atg22 like 153 432 7.1E-21 T 11-10-2018 IPR024671 Autophagy-related protein 22-like TVD_09700 f42e4d237ea149dcc34270d050bf6ee9 443 Pfam PF11700 Vacuole effluxer Atg22 like 66 144 1.3E-6 T 11-10-2018 IPR024671 Autophagy-related protein 22-like TVD_09410 a94e0afcf3cb5a11979dc25e8536fd3f 325 Gene3D G3DSA:3.40.190.290 104 314 5.2E-46 T 11-10-2018 TVD_09410 a94e0afcf3cb5a11979dc25e8536fd3f 325 Pfam PF03466 LysR substrate binding domain 100 303 9.6E-51 T 11-10-2018 IPR005119 LysR, substrate-binding TVD_09410 a94e0afcf3cb5a11979dc25e8536fd3f 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_09410 a94e0afcf3cb5a11979dc25e8536fd3f 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_09410 a94e0afcf3cb5a11979dc25e8536fd3f 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_09410 a94e0afcf3cb5a11979dc25e8536fd3f 325 SUPERFAMILY SSF46785 12 91 8.71E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_09410 a94e0afcf3cb5a11979dc25e8536fd3f 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 74 1.3E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_09410 a94e0afcf3cb5a11979dc25e8536fd3f 325 Gene3D G3DSA:1.10.10.10 15 103 3.8E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_09410 a94e0afcf3cb5a11979dc25e8536fd3f 325 SUPERFAMILY SSF53850 103 305 4.35E-46 T 11-10-2018 TVD_00145 dd07de3db0432c239bcf8d922d9925de 301 Pfam PF01556 DnaJ C terminal domain 136 275 7.3E-32 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal TVD_00145 dd07de3db0432c239bcf8d922d9925de 301 Gene3D G3DSA:2.60.260.20 124 200 4.3E-17 T 11-10-2018 TVD_00145 dd07de3db0432c239bcf8d922d9925de 301 Pfam PF00226 DnaJ domain 5 66 2.7E-25 T 11-10-2018 IPR001623 DnaJ domain TVD_00145 dd07de3db0432c239bcf8d922d9925de 301 SUPERFAMILY SSF46565 1 119 1.57E-33 T 11-10-2018 IPR036869 Chaperone J-domain superfamily TVD_00145 dd07de3db0432c239bcf8d922d9925de 301 SUPERFAMILY SSF49493 126 212 1.44E-19 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TVD_00145 dd07de3db0432c239bcf8d922d9925de 301 SMART SM00271 4 61 7.8E-28 T 11-10-2018 IPR001623 DnaJ domain TVD_00145 dd07de3db0432c239bcf8d922d9925de 301 Gene3D G3DSA:1.10.287.110 2 122 3.8E-37 T 11-10-2018 IPR036869 Chaperone J-domain superfamily TVD_00145 dd07de3db0432c239bcf8d922d9925de 301 Gene3D G3DSA:2.60.260.20 201 275 1.1E-26 T 11-10-2018 TVD_00145 dd07de3db0432c239bcf8d922d9925de 301 SUPERFAMILY SSF49493 204 276 2.62E-19 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TVD_00145 dd07de3db0432c239bcf8d922d9925de 301 PRINTS PR00625 DnaJ domain signature 7 25 5.5E-25 T 11-10-2018 IPR001623 DnaJ domain TVD_00145 dd07de3db0432c239bcf8d922d9925de 301 PRINTS PR00625 DnaJ domain signature 25 40 5.5E-25 T 11-10-2018 IPR001623 DnaJ domain TVD_00145 dd07de3db0432c239bcf8d922d9925de 301 PRINTS PR00625 DnaJ domain signature 41 61 5.5E-25 T 11-10-2018 IPR001623 DnaJ domain TVD_00145 dd07de3db0432c239bcf8d922d9925de 301 PRINTS PR00625 DnaJ domain signature 61 80 5.5E-25 T 11-10-2018 IPR001623 DnaJ domain TVD_01170 59dd1f9b60c9702ff2cd4296ee49ac93 683 Gene3D G3DSA:1.10.486.10 380 559 1.6E-118 T 11-10-2018 TVD_01170 59dd1f9b60c9702ff2cd4296ee49ac93 683 Gene3D G3DSA:3.40.50.300 4 269 5.4E-93 T 11-10-2018 TVD_01170 59dd1f9b60c9702ff2cd4296ee49ac93 683 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 268 5.0E-71 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TVD_01170 59dd1f9b60c9702ff2cd4296ee49ac93 683 Gene3D G3DSA:3.40.50.300 277 647 1.6E-118 T 11-10-2018 TVD_01170 59dd1f9b60c9702ff2cd4296ee49ac93 683 SUPERFAMILY SSF52540 2 654 5.97E-164 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01170 59dd1f9b60c9702ff2cd4296ee49ac93 683 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 682 38.741 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 TVD_01170 59dd1f9b60c9702ff2cd4296ee49ac93 683 Gene3D G3DSA:1.10.10.160 106 186 5.4E-93 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily TVD_01170 59dd1f9b60c9702ff2cd4296ee49ac93 683 Pfam PF13361 UvrD-like helicase C-terminal domain 274 628 6.5E-64 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TVD_12855 b5ff5daf63e3edc0199232acd78f39a0 494 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 218 273 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_12855 b5ff5daf63e3edc0199232acd78f39a0 494 Gene3D G3DSA:1.20.210.10 14 488 3.9E-189 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_12855 b5ff5daf63e3edc0199232acd78f39a0 494 SUPERFAMILY SSF81442 22 490 7.33E-119 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_12855 b5ff5daf63e3edc0199232acd78f39a0 494 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 26 455 1.4E-108 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_12855 b5ff5daf63e3edc0199232acd78f39a0 494 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 21 486 1.2E-210 T 11-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 TVD_03180 5d3e0201eed21458aca551e38d9e5fd4 257 Pfam PF13852 Protein of unknown function (DUF4197) 57 254 7.1E-57 T 11-10-2018 IPR025245 Protein of unknown function DUF4197 TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 SUPERFAMILY SSF110942 521 632 1.57E-31 T 11-10-2018 IPR037196 HSP90, C-terminal domain TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 Gene3D G3DSA:3.30.565.10 2 231 8.9E-76 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 31 40 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 Pfam PF00183 Hsp90 protein 226 633 4.5E-119 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 SUPERFAMILY SSF54211 235 490 8.34E-98 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 Gene3D G3DSA:3.30.230.80 234 406 8.1E-69 T 11-10-2018 TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 SMART SM00387 33 190 9.9E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 Gene3D G3DSA:3.40.50.11260 407 499 1.5E-31 T 11-10-2018 TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 PIRSF PIRSF002583 1 636 2.0E-207 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 174 7.2E-11 T 11-10-2018 TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 PRINTS PR00775 90kDa heat shock protein signature 81 98 1.2E-57 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 PRINTS PR00775 90kDa heat shock protein signature 126 148 1.2E-57 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 PRINTS PR00775 90kDa heat shock protein signature 178 195 1.2E-57 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 PRINTS PR00775 90kDa heat shock protein signature 196 214 1.2E-57 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 PRINTS PR00775 90kDa heat shock protein signature 32 54 1.2E-57 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 PRINTS PR00775 90kDa heat shock protein signature 99 116 1.2E-57 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 PRINTS PR00775 90kDa heat shock protein signature 11 31 1.2E-57 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 Hamap MF_00505 Chaperone protein HtpG [htpG]. 8 632 31.834 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 SUPERFAMILY SSF55874 10 220 9.56E-63 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_11735 161696cfd3784ae3d05f85e8d66a6245 636 Gene3D G3DSA:1.20.120.790 501 633 3.4E-37 T 11-10-2018 IPR037196 HSP90, C-terminal domain TVD_10370 24f42044b984181f14a5d5a37b28a757 228 Pfam PF06508 Queuosine biosynthesis protein QueC 7 217 6.6E-75 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 TVD_10370 24f42044b984181f14a5d5a37b28a757 228 PIRSF PIRSF006293 4 228 8.2E-74 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 TVD_10370 24f42044b984181f14a5d5a37b28a757 228 SUPERFAMILY SSF52402 6 228 1.46E-66 T 11-10-2018 TVD_10370 24f42044b984181f14a5d5a37b28a757 228 Gene3D G3DSA:3.40.50.620 5 222 9.6E-72 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_10370 24f42044b984181f14a5d5a37b28a757 228 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 6 223 54.134 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 TVD_10370 24f42044b984181f14a5d5a37b28a757 228 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 8 210 7.3E-57 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 TVD_05755 41dad42e2ef5626a5014a0d82163e7e9 381 Gene3D G3DSA:3.40.50.10990 176 348 1.5E-57 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TVD_05755 41dad42e2ef5626a5014a0d82163e7e9 381 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 175 372 37.806 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TVD_05755 41dad42e2ef5626a5014a0d82163e7e9 381 Pfam PF00925 GTP cyclohydrolase II 182 345 1.9E-51 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TVD_05755 41dad42e2ef5626a5014a0d82163e7e9 381 SUPERFAMILY SSF142695 180 347 1.57E-48 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TVD_02315 e3effbe84bdc4edb4f77b526d2f70148 173 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 159 26.295 T 11-10-2018 IPR022973 Ribosomal protein L10 TVD_02315 e3effbe84bdc4edb4f77b526d2f70148 173 SUPERFAMILY SSF160369 2 170 1.14E-51 T 11-10-2018 TVD_02315 e3effbe84bdc4edb4f77b526d2f70148 173 Pfam PF00466 Ribosomal protein L10 4 99 1.3E-24 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 TVD_02315 e3effbe84bdc4edb4f77b526d2f70148 173 Gene3D G3DSA:3.30.70.1730 3 132 5.4E-32 T 11-10-2018 TVD_02315 e3effbe84bdc4edb4f77b526d2f70148 173 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 11-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_05785 000038c005d2b4e39d0377b1171a2313 220 SUPERFAMILY SSF56925 34 220 3.14E-32 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TVD_05785 000038c005d2b4e39d0377b1171a2313 220 Gene3D G3DSA:2.40.160.20 33 220 3.7E-64 T 11-10-2018 TVD_05785 000038c005d2b4e39d0377b1171a2313 220 Pfam PF03922 OmpW family 35 220 3.6E-52 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 TVD_11395 b86c005518b063e0d15677a5eb306970 117 Hamap MF_00460 Protein RnfH [rnfH]. 2 92 24.874 T 11-10-2018 IPR005346 RnfH protein TVD_11395 b86c005518b063e0d15677a5eb306970 117 Pfam PF03658 RnfH family Ubiquitin 2 84 2.9E-34 T 11-10-2018 IPR005346 RnfH protein TVD_11395 b86c005518b063e0d15677a5eb306970 117 Gene3D G3DSA:3.10.20.280 1 86 1.0E-32 T 11-10-2018 IPR037021 RnfH superfamily TVD_11395 b86c005518b063e0d15677a5eb306970 117 SUPERFAMILY SSF54285 1 76 3.36E-25 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp TVD_06420 2200314eaef1fc0657287758c1f12c8e 231 SUPERFAMILY SSF56784 12 224 8.95E-55 T 11-10-2018 IPR036412 HAD-like superfamily TVD_06420 2200314eaef1fc0657287758c1f12c8e 231 Gene3D G3DSA:1.10.150.240 28 93 1.0E-50 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TVD_06420 2200314eaef1fc0657287758c1f12c8e 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 195 8.9E-31 T 11-10-2018 TVD_06420 2200314eaef1fc0657287758c1f12c8e 231 Gene3D G3DSA:3.40.50.1000 16 209 1.0E-50 T 11-10-2018 IPR023214 HAD superfamily TVD_06420 2200314eaef1fc0657287758c1f12c8e 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 113 189 1.6E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_07935 b4e832e9844abec767dd996077a8527a 161 Pfam PF05130 FlgN protein 6 149 3.8E-22 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 TVD_07935 b4e832e9844abec767dd996077a8527a 161 SUPERFAMILY SSF140566 8 132 1.7E-16 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 TVD_07935 b4e832e9844abec767dd996077a8527a 161 Gene3D G3DSA:1.20.58.300 3 132 8.8E-26 T 11-10-2018 TVD_07890 1e9194cae7303d187c552f994e6f6519 246 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 223 1.4E-56 T 11-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 TVD_07890 1e9194cae7303d187c552f994e6f6519 246 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 2.3E-35 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TVD_07890 1e9194cae7303d187c552f994e6f6519 246 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 242 1.1E-22 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TVD_07890 1e9194cae7303d187c552f994e6f6519 246 SUPERFAMILY SSF117143 77 204 3.66E-20 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like TVD_13610 8f66fca52f9e6c3d675c9f5f2da73a5a 148 Gene3D G3DSA:3.50.80.10 1 145 1.1E-48 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily TVD_13610 8f66fca52f9e6c3d675c9f5f2da73a5a 148 SUPERFAMILY SSF69500 2 144 7.98E-50 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily TVD_13610 8f66fca52f9e6c3d675c9f5f2da73a5a 148 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 144 3.0E-48 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 TVD_13610 8f66fca52f9e6c3d675c9f5f2da73a5a 148 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 31.763 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 TVD_13610 8f66fca52f9e6c3d675c9f5f2da73a5a 148 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 145 1.1E-49 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 TVD_06490 a9ff4210de31cdfcc74007c476e57e52 387 Gene3D G3DSA:3.30.70.260 308 387 6.1E-17 T 11-10-2018 TVD_06490 a9ff4210de31cdfcc74007c476e57e52 387 SUPERFAMILY SSF55021 314 387 2.5E-11 T 11-10-2018 TVD_06490 a9ff4210de31cdfcc74007c476e57e52 387 SUPERFAMILY SSF52283 4 105 1.89E-18 T 11-10-2018 TVD_06490 a9ff4210de31cdfcc74007c476e57e52 387 Gene3D G3DSA:3.40.50.720 21 297 7.0E-60 T 11-10-2018 TVD_06490 a9ff4210de31cdfcc74007c476e57e52 387 Gene3D G3DSA:3.40.50.720 83 272 7.0E-60 T 11-10-2018 TVD_06490 a9ff4210de31cdfcc74007c476e57e52 387 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 21 306 4.8E-17 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 TVD_06490 a9ff4210de31cdfcc74007c476e57e52 387 SUPERFAMILY SSF51735 83 274 9.61E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_06490 a9ff4210de31cdfcc74007c476e57e52 387 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 140 167 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 TVD_06490 a9ff4210de31cdfcc74007c476e57e52 387 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 125 274 3.0E-30 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TVD_09935 967ee7ac1c5ac11b40d8627eb315bf27 196 Gene3D G3DSA:3.50.70.10 30 177 1.6E-6 T 11-10-2018 IPR016088 Chalcone isomerase, 3-layer sandwich KEGG: 00941+5.5.1.6|MetaCyc: PWY-2002|MetaCyc: PWY-5059|MetaCyc: PWY-6325|MetaCyc: PWY-6787|MetaCyc: PWY-7397|MetaCyc: PWY-7897 TVD_09935 967ee7ac1c5ac11b40d8627eb315bf27 196 SUPERFAMILY SSF54626 31 193 2.22E-5 T 11-10-2018 IPR036298 Chalcone isomerase superfamily GO:0016872 TVD_09935 967ee7ac1c5ac11b40d8627eb315bf27 196 Pfam PF16036 Chalcone isomerase-like 31 194 1.2E-29 T 11-10-2018 IPR016087 Chalcone isomerase GO:0016872 TVD_03500 c004e2e9b420f6ae8bfcc68644810702 215 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 19 199 3.5E-34 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase TVD_03500 c004e2e9b420f6ae8bfcc68644810702 215 Gene3D G3DSA:3.40.50.10420 18 213 9.5E-50 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily TVD_03500 c004e2e9b420f6ae8bfcc68644810702 215 PIRSF PIRSF006806 15 201 6.3E-34 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase TVD_03500 c004e2e9b420f6ae8bfcc68644810702 215 SUPERFAMILY SSF100950 18 207 8.79E-51 T 11-10-2018 IPR037171 NagB/RpiA transferase-like TVD_03500 c004e2e9b420f6ae8bfcc68644810702 215 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 19 199 3.9E-44 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 Gene3D G3DSA:3.40.120.10 257 339 3.6E-62 T 11-10-2018 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 SUPERFAMILY SSF53738 258 364 2.67E-31 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 135 1.9E-42 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 443 8.4E-14 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 367 5.2E-32 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 SUPERFAMILY SSF53738 156 256 9.42E-27 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 Gene3D G3DSA:3.30.310.50 370 446 1.4E-23 T 11-10-2018 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 Gene3D G3DSA:3.40.120.10 1 153 3.3E-47 T 11-10-2018 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 6.7E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 6.7E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 6.7E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 443 4.2E-183 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 SUPERFAMILY SSF53738 3 181 4.71E-48 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 445 46.38 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 Gene3D G3DSA:3.40.120.10 174 362 3.6E-62 T 11-10-2018 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 SUPERFAMILY SSF55957 358 445 2.35E-20 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_03565 9f61abf9d51a1782030f012ab2e43595 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 8.6E-18 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_13510 fdc70c6c9b129ddf5c93e86fbf3e9458 85 Pfam PF01809 Haemolytic domain 6 71 4.0E-30 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TVD_13510 fdc70c6c9b129ddf5c93e86fbf3e9458 85 SMART SM01234 4 71 2.2E-44 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TVD_13510 fdc70c6c9b129ddf5c93e86fbf3e9458 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 19 71 1.0E-17 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TVD_13510 fdc70c6c9b129ddf5c93e86fbf3e9458 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 77 6.4E-28 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TVD_13510 fdc70c6c9b129ddf5c93e86fbf3e9458 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 4 72 24.418 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor TVD_12950 eca3b487e627f2e2d237ede0a6c4db4d 706 SUPERFAMILY SSF56935 31 704 5.3E-104 T 11-10-2018 TVD_12950 eca3b487e627f2e2d237ede0a6c4db4d 706 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 163 2.5E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TVD_12950 eca3b487e627f2e2d237ede0a6c4db4d 706 Gene3D G3DSA:2.40.170.20 189 704 3.3E-79 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TVD_12950 eca3b487e627f2e2d237ede0a6c4db4d 706 Gene3D G3DSA:2.170.130.10 39 168 9.8E-23 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TVD_12950 eca3b487e627f2e2d237ede0a6c4db4d 706 Pfam PF00593 TonB dependent receptor 238 702 6.6E-42 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TVD_07250 70212fee108d2c4978020c3f60df79a6 453 SUPERFAMILY SSF50156 89 185 6.31E-12 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TVD_07250 70212fee108d2c4978020c3f60df79a6 453 Pfam PF13180 PDZ domain 225 287 3.5E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_07250 70212fee108d2c4978020c3f60df79a6 453 Gene3D G3DSA:2.30.42.10 221 313 1.7E-23 T 11-10-2018 TVD_07250 70212fee108d2c4978020c3f60df79a6 453 Gene3D G3DSA:2.30.42.10 127 220 7.8E-19 T 11-10-2018 TVD_07250 70212fee108d2c4978020c3f60df79a6 453 SUPERFAMILY SSF50156 210 294 9.86E-17 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TVD_07250 70212fee108d2c4978020c3f60df79a6 453 SMART SM00228 118 187 0.0071 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_07250 70212fee108d2c4978020c3f60df79a6 453 SMART SM00228 211 280 2.4E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_07250 70212fee108d2c4978020c3f60df79a6 453 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 452 1.1E-115 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 TVD_07250 70212fee108d2c4978020c3f60df79a6 453 Pfam PF02163 Peptidase family M50 9 436 3.7E-75 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 TVD_09215 411e93b5f2afb6c8542c745ba6e0cf54 174 SUPERFAMILY SSF142433 22 172 1.83E-53 T 11-10-2018 IPR036653 CinA-like, C-terminal TVD_09215 411e93b5f2afb6c8542c745ba6e0cf54 174 Gene3D G3DSA:3.90.950.20 3 174 1.3E-60 T 11-10-2018 IPR036653 CinA-like, C-terminal TVD_09215 411e93b5f2afb6c8542c745ba6e0cf54 174 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 27 172 6.5E-46 T 11-10-2018 IPR008136 CinA, C-terminal TVD_09215 411e93b5f2afb6c8542c745ba6e0cf54 174 Pfam PF02464 Competence-damaged protein 26 172 2.3E-55 T 11-10-2018 IPR008136 CinA, C-terminal TVD_05625 1f1646461966543dd0d6e179c936cfe7 371 SUPERFAMILY SSF51713 1 362 3.53E-163 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TVD_05625 1f1646461966543dd0d6e179c936cfe7 371 Gene3D G3DSA:3.20.20.105 1 365 1.3E-167 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TVD_05625 1f1646461966543dd0d6e179c936cfe7 371 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 362 57.149 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TVD_05625 1f1646461966543dd0d6e179c936cfe7 371 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 359 6.9E-91 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TVD_05625 1f1646461966543dd0d6e179c936cfe7 371 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 7 365 4.0E-166 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TVD_05625 1f1646461966543dd0d6e179c936cfe7 371 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 4 364 1.1E-159 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 TVD_05045 db976b3b97faa733421493bcd5fe07e9 140 PIRSF PIRSF027377 1 124 1.0E-50 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 TVD_05045 db976b3b97faa733421493bcd5fe07e9 140 SUPERFAMILY SSF55620 5 110 2.67E-24 T 11-10-2018 TVD_05045 db976b3b97faa733421493bcd5fe07e9 140 Gene3D G3DSA:3.30.1130.10 3 125 1.8E-41 T 11-10-2018 TVD_05045 db976b3b97faa733421493bcd5fe07e9 140 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 7 117 7.0E-50 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 TVD_05045 db976b3b97faa733421493bcd5fe07e9 140 Pfam PF14489 QueF-like protein 40 118 5.4E-31 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 TVD_05045 db976b3b97faa733421493bcd5fe07e9 140 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 140 47.893 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 TVD_11365 204caafd106c7dbe4ac8aa37b55f7061 479 Pfam PF12626 Polymerase A arginine-rich C-terminus 330 454 1.4E-41 T 11-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain TVD_11365 204caafd106c7dbe4ac8aa37b55f7061 479 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 458 7.9E-148 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 TVD_11365 204caafd106c7dbe4ac8aa37b55f7061 479 SUPERFAMILY SSF81301 24 179 9.48E-40 T 11-10-2018 TVD_11365 204caafd106c7dbe4ac8aa37b55f7061 479 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 211 272 3.8E-17 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TVD_11365 204caafd106c7dbe4ac8aa37b55f7061 479 Gene3D G3DSA:3.30.460.10 19 180 2.2E-60 T 11-10-2018 TVD_11365 204caafd106c7dbe4ac8aa37b55f7061 479 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 16 459 36.628 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 TVD_11365 204caafd106c7dbe4ac8aa37b55f7061 479 Gene3D G3DSA:1.10.3090.10 182 429 2.6E-81 T 11-10-2018 TVD_11365 204caafd106c7dbe4ac8aa37b55f7061 479 Pfam PF01743 Poly A polymerase head domain 54 183 2.2E-37 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 TVD_11365 204caafd106c7dbe4ac8aa37b55f7061 479 SUPERFAMILY SSF81891 182 418 8.63E-47 T 11-10-2018 TVD_09470 3b2e3bfa94a972193878ce82cb8c4376 469 Pfam PF08936 Carboxysome Shell Carbonic Anhydrase 9 466 9.7E-206 T 11-10-2018 IPR014074 Carboxysome shell carbonic anhydrase TVD_09470 3b2e3bfa94a972193878ce82cb8c4376 469 TIGRFAM TIGR02701 shell_carb_anhy: carboxysome shell carbonic anhydrase 9 458 3.3E-185 T 11-10-2018 IPR014074 Carboxysome shell carbonic anhydrase TVD_09470 3b2e3bfa94a972193878ce82cb8c4376 469 Gene3D G3DSA:3.30.1330.140 353 469 1.9E-44 T 11-10-2018 TVD_09470 3b2e3bfa94a972193878ce82cb8c4376 469 Gene3D G3DSA:1.20.120.1310 1 102 1.2E-27 T 11-10-2018 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 SMART SM00316 275 347 5.7E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 SMART SM00316 449 520 2.6E-18 T 11-10-2018 IPR022967 RNA-binding domain, S1 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 SMART SM00316 190 260 7.7E-28 T 11-10-2018 IPR022967 RNA-binding domain, S1 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 SMART SM00316 103 171 4.1E-9 T 11-10-2018 IPR022967 RNA-binding domain, S1 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 SMART SM00316 362 434 1.3E-23 T 11-10-2018 IPR022967 RNA-binding domain, S1 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 SMART SM00316 19 87 4.5E-5 T 11-10-2018 IPR022967 RNA-binding domain, S1 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 SUPERFAMILY SSF50249 362 449 7.01E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 Gene3D G3DSA:2.40.50.140 6 99 9.7E-16 T 11-10-2018 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 Gene3D G3DSA:2.40.50.140 100 183 4.0E-7 T 11-10-2018 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 SUPERFAMILY SSF50249 190 277 1.72E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 Pfam PF00575 S1 RNA binding domain 275 347 1.3E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 Pfam PF00575 S1 RNA binding domain 103 171 9.5E-11 T 11-10-2018 IPR003029 S1 domain GO:0003676 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 Pfam PF00575 S1 RNA binding domain 190 260 3.9E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 Pfam PF00575 S1 RNA binding domain 361 434 7.4E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 Pfam PF00575 S1 RNA binding domain 447 520 1.3E-15 T 11-10-2018 IPR003029 S1 domain GO:0003676 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 Pfam PF00575 S1 RNA binding domain 19 73 4.4E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 Gene3D G3DSA:2.40.50.140 187 268 6.9E-27 T 11-10-2018 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 SUPERFAMILY SSF50249 1 112 3.13E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 Gene3D G3DSA:2.40.50.140 445 527 2.3E-19 T 11-10-2018 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 PIRSF PIRSF002111 1 534 2.1E-214 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 Gene3D G3DSA:2.40.50.140 358 444 5.6E-26 T 11-10-2018 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 Gene3D G3DSA:2.40.50.140 269 357 1.1E-29 T 11-10-2018 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.9E-214 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 SUPERFAMILY SSF50249 429 533 4.03E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 SUPERFAMILY SSF50249 255 363 1.07E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 SUPERFAMILY SSF50249 103 185 1.84E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.4E-84 T 11-10-2018 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.4E-84 T 11-10-2018 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.4E-84 T 11-10-2018 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.4E-84 T 11-10-2018 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.4E-84 T 11-10-2018 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.4E-84 T 11-10-2018 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.4E-84 T 11-10-2018 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.4E-84 T 11-10-2018 TVD_06520 42a74a763d14f842037e19d88a08ccbf 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.4E-84 T 11-10-2018 TVD_13565 a116bfaddf56838cffd7cdae74bf5ba8 156 SUPERFAMILY SSF81573 63 121 2.35E-14 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily TVD_13565 a116bfaddf56838cffd7cdae74bf5ba8 156 Gene3D G3DSA:1.20.5.620 62 122 2.8E-15 T 11-10-2018 TVD_13565 a116bfaddf56838cffd7cdae74bf5ba8 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 3.5E-34 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TVD_13565 a116bfaddf56838cffd7cdae74bf5ba8 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.1E-48 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 TVD_13565 a116bfaddf56838cffd7cdae74bf5ba8 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.189 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TVD_06330 55cd7ec6199ce3af8d8af0d3d9d7f940 274 SUPERFAMILY SSF52540 9 253 4.71E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06330 55cd7ec6199ce3af8d8af0d3d9d7f940 274 Gene3D G3DSA:3.40.50.300 8 250 4.9E-55 T 11-10-2018 TVD_06330 55cd7ec6199ce3af8d8af0d3d9d7f940 274 PIRSF PIRSF003092 2 256 4.8E-74 T 11-10-2018 IPR025501 ATP binding protein MinD TVD_06330 55cd7ec6199ce3af8d8af0d3d9d7f940 274 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 9 250 1.7E-20 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 TVD_08610 36f0217f4f84e2e799feb2bec890f243 477 Pfam PF00817 impB/mucB/samB family 24 150 2.7E-6 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TVD_08610 36f0217f4f84e2e799feb2bec890f243 477 SUPERFAMILY SSF56672 2 218 1.01E-27 T 11-10-2018 TVD_08610 36f0217f4f84e2e799feb2bec890f243 477 Gene3D G3DSA:2.30.40.20 37 70 6.4E-9 T 11-10-2018 TVD_08610 36f0217f4f84e2e799feb2bec890f243 477 Gene3D G3DSA:3.30.70.270 71 169 6.4E-9 T 11-10-2018 TVD_08610 36f0217f4f84e2e799feb2bec890f243 477 Gene3D G3DSA:1.10.150.20 170 214 6.4E-9 T 11-10-2018 TVD_09680 30a9a60892a3418764bc94f99b7a9889 418 Gene3D G3DSA:2.40.30.170 58 335 5.1E-36 T 11-10-2018 TVD_09680 30a9a60892a3418764bc94f99b7a9889 418 Gene3D G3DSA:1.10.287.470 102 221 5.1E-36 T 11-10-2018 TVD_09680 30a9a60892a3418764bc94f99b7a9889 418 Pfam PF13533 Biotin-lipoyl like 73 115 3.5E-6 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain TVD_09680 30a9a60892a3418764bc94f99b7a9889 418 SUPERFAMILY SSF111369 60 282 6.41E-14 T 11-10-2018 TVD_09680 30a9a60892a3418764bc94f99b7a9889 418 Pfam PF13437 HlyD family secretion protein 221 275 1.8E-6 T 11-10-2018 TVD_09680 30a9a60892a3418764bc94f99b7a9889 418 Gene3D G3DSA:2.40.50.100 68 256 5.1E-36 T 11-10-2018 TVD_09680 30a9a60892a3418764bc94f99b7a9889 418 Gene3D G3DSA:2.40.420.20 336 364 5.1E-36 T 11-10-2018 TVD_03625 e0c8f27c2911f9c8fa48a55ec7cfca06 162 Pfam PF12838 4Fe-4S dicluster domain 62 115 2.6E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TVD_03625 e0c8f27c2911f9c8fa48a55ec7cfca06 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 140 7.7E-46 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03625 e0c8f27c2911f9c8fa48a55ec7cfca06 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 27.6 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03625 e0c8f27c2911f9c8fa48a55ec7cfca06 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_03625 e0c8f27c2911f9c8fa48a55ec7cfca06 162 SUPERFAMILY SSF54862 36 145 1.26E-25 T 11-10-2018 TVD_03625 e0c8f27c2911f9c8fa48a55ec7cfca06 162 Gene3D G3DSA:3.30.70.3270 36 161 2.5E-38 T 11-10-2018 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 SUPERFAMILY SSF56672 497 900 1.56E-157 T 11-10-2018 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 SUPERFAMILY SSF53098 299 490 2.99E-51 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_13015 eab8022afbaad2addeabb13359c6a188 900 TIGRFAM TIGR00593 pola: DNA polymerase I 6 900 9.7E-283 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 SMART SM00482 658 864 1.8E-115 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 PRINTS PR00868 DNA-polymerase family A (pol I) signature 726 751 1.3E-79 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 PRINTS PR00868 DNA-polymerase family A (pol I) signature 847 860 1.3E-79 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 715 1.3E-79 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 PRINTS PR00868 DNA-polymerase family A (pol I) signature 627 649 1.3E-79 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 PRINTS PR00868 DNA-polymerase family A (pol I) signature 650 665 1.3E-79 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 PRINTS PR00868 DNA-polymerase family A (pol I) signature 785 796 1.3E-79 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 PRINTS PR00868 DNA-polymerase family A (pol I) signature 672 695 1.3E-79 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 PRINTS PR00868 DNA-polymerase family A (pol I) signature 763 774 1.3E-79 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 PRINTS PR00868 DNA-polymerase family A (pol I) signature 817 833 1.3E-79 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 SMART SM00474 302 489 3.1E-31 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 Gene3D G3DSA:1.10.150.20 171 243 7.3E-97 T 11-10-2018 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 167 2.5E-54 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 Gene3D G3DSA:1.10.150.20 681 824 2.2E-112 T 11-10-2018 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 Pfam PF00476 DNA polymerase family A 523 898 4.8E-153 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 ProSitePatterns PS00447 DNA polymerase family A signature. 726 745 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 Pfam PF01612 3'-5' exonuclease 302 488 2.9E-30 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 Gene3D G3DSA:3.30.420.10 299 514 1.9E-65 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 SUPERFAMILY SSF88723 4 167 1.54E-56 T 11-10-2018 IPR029060 PIN-like domain superfamily TVD_13015 eab8022afbaad2addeabb13359c6a188 900 Gene3D G3DSA:1.20.1060.10 515 630 1.1E-38 T 11-10-2018 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 SMART SM00475 3 258 1.4E-129 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 262 4.3E-31 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 SMART SM00279 170 205 3.1E-15 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 SUPERFAMILY SSF47807 168 282 6.28E-34 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily TVD_13015 eab8022afbaad2addeabb13359c6a188 900 Gene3D G3DSA:3.40.50.1010 6 274 7.3E-97 T 11-10-2018 TVD_13015 eab8022afbaad2addeabb13359c6a188 900 Gene3D G3DSA:3.30.70.370 636 896 2.2E-112 T 11-10-2018 TVD_08125 d3ee8fafff1207f8d9e46392d80ff42d 148 SUPERFAMILY SSF47413 5 79 4.93E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TVD_08125 d3ee8fafff1207f8d9e46392d80ff42d 148 PRINTS PR01693 Cyanase signature 36 53 1.3E-28 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TVD_08125 d3ee8fafff1207f8d9e46392d80ff42d 148 PRINTS PR01693 Cyanase signature 16 31 1.3E-28 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TVD_08125 d3ee8fafff1207f8d9e46392d80ff42d 148 PRINTS PR01693 Cyanase signature 133 143 1.3E-28 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TVD_08125 d3ee8fafff1207f8d9e46392d80ff42d 148 PRINTS PR01693 Cyanase signature 84 98 1.3E-28 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TVD_08125 d3ee8fafff1207f8d9e46392d80ff42d 148 PRINTS PR01693 Cyanase signature 102 118 1.3E-28 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TVD_08125 d3ee8fafff1207f8d9e46392d80ff42d 148 PIRSF PIRSF001263 1 148 8.4E-55 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TVD_08125 d3ee8fafff1207f8d9e46392d80ff42d 148 SUPERFAMILY SSF55234 81 148 6.8E-31 T 11-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 TVD_08125 d3ee8fafff1207f8d9e46392d80ff42d 148 Gene3D G3DSA:1.10.260.40 1 80 2.9E-22 T 11-10-2018 TVD_08125 d3ee8fafff1207f8d9e46392d80ff42d 148 TIGRFAM TIGR00673 cynS: cyanase 6 148 1.0E-53 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TVD_08125 d3ee8fafff1207f8d9e46392d80ff42d 148 SMART SM01116 76 148 8.7E-50 T 11-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 TVD_08125 d3ee8fafff1207f8d9e46392d80ff42d 148 Gene3D G3DSA:3.30.1160.10 82 148 3.1E-36 T 11-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 TVD_08125 d3ee8fafff1207f8d9e46392d80ff42d 148 Pfam PF02560 Cyanate lyase C-terminal domain 80 146 9.0E-38 T 11-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 TVD_08125 d3ee8fafff1207f8d9e46392d80ff42d 148 Hamap MF_00535 Cyanate hydratase [cynS]. 1 148 70.948 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 TVD_12275 6d43a0989447343c739904dd460427c5 169 Gene3D G3DSA:3.40.30.10 43 159 1.1E-10 T 11-10-2018 TVD_12275 6d43a0989447343c739904dd460427c5 169 SUPERFAMILY SSF52833 52 157 2.11E-12 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_12275 6d43a0989447343c739904dd460427c5 169 Pfam PF13098 Thioredoxin-like domain 51 136 2.5E-9 T 11-10-2018 IPR012336 Thioredoxin-like fold TVD_10260 107c43275f55f0d3a5f20c5ebe999a4b 78 SUPERFAMILY SSF143800 2 77 2.75E-30 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10260 107c43275f55f0d3a5f20c5ebe999a4b 78 Pfam PF00830 Ribosomal L28 family 3 61 1.3E-25 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10260 107c43275f55f0d3a5f20c5ebe999a4b 78 Gene3D G3DSA:2.30.170.40 2 78 1.8E-32 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10260 107c43275f55f0d3a5f20c5ebe999a4b 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.279 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_10260 107c43275f55f0d3a5f20c5ebe999a4b 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 4.2E-27 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_12280 70a1c1a2ed89cd673b1e1c5e4b4f300c 213 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 151 168 7.4E-9 T 11-10-2018 TVD_12280 70a1c1a2ed89cd673b1e1c5e4b4f300c 213 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 169 188 7.4E-9 T 11-10-2018 TVD_12280 70a1c1a2ed89cd673b1e1c5e4b4f300c 213 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 189 209 7.4E-9 T 11-10-2018 TVD_12280 70a1c1a2ed89cd673b1e1c5e4b4f300c 213 SUPERFAMILY SSF103088 81 204 4.58E-34 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_12280 70a1c1a2ed89cd673b1e1c5e4b4f300c 213 Gene3D G3DSA:3.30.1330.60 78 212 7.6E-40 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_12280 70a1c1a2ed89cd673b1e1c5e4b4f300c 213 PRINTS PR01021 OMPA domain signature 104 126 5.6E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TVD_12280 70a1c1a2ed89cd673b1e1c5e4b4f300c 213 PRINTS PR01021 OMPA domain signature 136 151 5.6E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TVD_12280 70a1c1a2ed89cd673b1e1c5e4b4f300c 213 PRINTS PR01021 OMPA domain signature 151 167 5.6E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TVD_12280 70a1c1a2ed89cd673b1e1c5e4b4f300c 213 Pfam PF00691 OmpA family 103 200 5.7E-23 T 11-10-2018 IPR006665 OmpA-like domain TVD_01365 de60d5eb7fb04b854f757b8f035b7595 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.1E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TVD_01365 de60d5eb7fb04b854f757b8f035b7595 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 TVD_01365 de60d5eb7fb04b854f757b8f035b7595 112 SUPERFAMILY SSF54913 1 112 1.59E-46 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TVD_01365 de60d5eb7fb04b854f757b8f035b7595 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 TVD_01365 de60d5eb7fb04b854f757b8f035b7595 112 PRINTS PR00340 P-II protein signature 83 103 8.2E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TVD_01365 de60d5eb7fb04b854f757b8f035b7595 112 PRINTS PR00340 P-II protein signature 2 17 8.2E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TVD_01365 de60d5eb7fb04b854f757b8f035b7595 112 PRINTS PR00340 P-II protein signature 23 41 8.2E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TVD_01365 de60d5eb7fb04b854f757b8f035b7595 112 PRINTS PR00340 P-II protein signature 52 75 8.2E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TVD_01365 de60d5eb7fb04b854f757b8f035b7595 112 PIRSF PIRSF039144 1 112 8.8E-56 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TVD_01365 de60d5eb7fb04b854f757b8f035b7595 112 Gene3D G3DSA:3.30.70.120 1 112 1.8E-47 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TVD_01365 de60d5eb7fb04b854f757b8f035b7595 112 SMART SM00938 4 105 1.0E-67 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TVD_13295 fb368d6d713ae975b3c57b6ccc5fe244 377 Pfam PF00487 Fatty acid desaturase 40 270 1.1E-18 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 TVD_13295 fb368d6d713ae975b3c57b6ccc5fe244 377 PIRSF PIRSF000345 3 304 3.4E-90 T 11-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 TVD_13295 fb368d6d713ae975b3c57b6ccc5fe244 377 PRINTS PR00075 Fatty acid desaturase family 1 signature 37 59 1.1E-34 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 TVD_13295 fb368d6d713ae975b3c57b6ccc5fe244 377 PRINTS PR00075 Fatty acid desaturase family 1 signature 60 80 1.1E-34 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 TVD_13295 fb368d6d713ae975b3c57b6ccc5fe244 377 PRINTS PR00075 Fatty acid desaturase family 1 signature 187 208 1.1E-34 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 TVD_13295 fb368d6d713ae975b3c57b6ccc5fe244 377 PRINTS PR00075 Fatty acid desaturase family 1 signature 230 244 1.1E-34 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 TVD_13295 fb368d6d713ae975b3c57b6ccc5fe244 377 PRINTS PR00075 Fatty acid desaturase family 1 signature 98 127 1.1E-34 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 Gene3D G3DSA:3.90.1440.10 254 388 1.4E-170 T 11-10-2018 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 PRINTS PR00906 SecA protein signature 63 87 8.1E-56 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 PRINTS PR00906 SecA protein signature 101 115 8.1E-56 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 PRINTS PR00906 SecA protein signature 359 381 8.1E-56 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 PRINTS PR00906 SecA protein signature 396 413 8.1E-56 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 PRINTS PR00906 SecA protein signature 433 446 8.1E-56 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 PRINTS PR00906 SecA protein signature 117 127 8.1E-56 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 Gene3D G3DSA:1.10.3060.10 641 853 2.1E-79 T 11-10-2018 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 Pfam PF07516 SecA Wing and Scaffold domain 637 849 6.6E-69 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 SUPERFAMILY SSF81767 252 388 2.62E-42 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 Pfam PF02810 SEC-C motif 913 931 3.3E-10 T 11-10-2018 IPR004027 SEC-C motif TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 Gene3D G3DSA:3.40.50.300 23 435 1.4E-170 T 11-10-2018 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 SUPERFAMILY SSF52540 437 638 3.32E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 SUPERFAMILY SSF52540 6 433 7.98E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 Gene3D G3DSA:3.10.450.50 891 932 7.2E-8 T 11-10-2018 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 184 838 9.6E-269 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 Pfam PF01043 SecA preprotein cross-linking domain 257 378 5.2E-37 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 SMART SM00958 253 378 8.3E-73 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 852 19.809 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 SMART SM00957 6 422 2.1E-286 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 SUPERFAMILY SSF81886 641 921 1.02E-82 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 Gene3D G3DSA:3.40.50.300 437 640 2.1E-84 T 11-10-2018 TVD_02230 3d37e85d82faa4ff91168ab6e4cecbc9 932 Pfam PF07517 SecA DEAD-like domain 7 422 2.5E-129 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 TVD_08685 702ccab2880f06d35c008e6139f0bf86 287 Gene3D G3DSA:3.40.190.290 85 283 7.6E-22 T 11-10-2018 TVD_08685 702ccab2880f06d35c008e6139f0bf86 287 Pfam PF03466 LysR substrate binding domain 80 281 6.4E-26 T 11-10-2018 IPR005119 LysR, substrate-binding TVD_08685 702ccab2880f06d35c008e6139f0bf86 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 54 7.2E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_08685 702ccab2880f06d35c008e6139f0bf86 287 SUPERFAMILY SSF46785 2 76 4.15E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_08685 702ccab2880f06d35c008e6139f0bf86 287 Gene3D G3DSA:1.10.10.10 1 74 3.2E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_08685 702ccab2880f06d35c008e6139f0bf86 287 SUPERFAMILY SSF53850 82 284 2.9E-30 T 11-10-2018 TVD_13280 23dec56e8901971084edf1d8f3519541 338 PIRSF PIRSF015268 1 336 1.2E-143 T 11-10-2018 IPR011204 Virulence protein RhuM-like TVD_13280 23dec56e8901971084edf1d8f3519541 338 Pfam PF13310 Virulence protein RhuM family 62 310 2.8E-110 T 11-10-2018 IPR011204 Virulence protein RhuM-like TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 3.6E-59 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 Gene3D G3DSA:3.40.50.300 1 205 7.6E-71 T 11-10-2018 TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.424 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 2.0E-34 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 SUPERFAMILY SSF50465 304 396 2.16E-37 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 Gene3D G3DSA:2.40.30.10 340 395 3.3E-30 T 11-10-2018 TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 Gene3D G3DSA:2.40.30.10 209 336 5.7E-52 T 11-10-2018 TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.9E-19 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 1.4E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 SUPERFAMILY SSF50447 207 303 6.87E-31 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 6.6E-231 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TVD_02285 f947f3bc51a5f195c6e86c6bce811f4d 396 SUPERFAMILY SSF52540 6 221 7.0E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_02385 16a66d1cc747a1f5419ae40e3096b019 113 Pfam PF00237 Ribosomal protein L22p/L17e 5 106 7.5E-38 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 TVD_02385 16a66d1cc747a1f5419ae40e3096b019 113 Gene3D G3DSA:3.90.470.10 1 113 4.3E-44 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 TVD_02385 16a66d1cc747a1f5419ae40e3096b019 113 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.083 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02385 16a66d1cc747a1f5419ae40e3096b019 113 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02385 16a66d1cc747a1f5419ae40e3096b019 113 SUPERFAMILY SSF54843 1 110 1.07E-42 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 TVD_02385 16a66d1cc747a1f5419ae40e3096b019 113 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 3.9E-45 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_12295 ed2892c08901036139a88ea804611d9b 160 Pfam PF04186 FxsA cytoplasmic membrane protein 10 114 8.5E-30 T 11-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 TVD_11155 a2047be98e544b52398ab7406b51702e 130 Gene3D G3DSA:3.30.230.10 1 130 8.9E-52 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TVD_11155 a2047be98e544b52398ab7406b51702e 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.074 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid TVD_11155 a2047be98e544b52398ab7406b51702e 130 SUPERFAMILY SSF54211 5 130 8.72E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_11155 a2047be98e544b52398ab7406b51702e 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 TVD_11155 a2047be98e544b52398ab7406b51702e 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 9.0E-45 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 TVD_12110 1af245b6384c87a63f8b66e98e39bcf9 361 SMART SM00937 67 180 4.0E-60 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 TVD_12110 1af245b6384c87a63f8b66e98e39bcf9 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 359 1.9E-164 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 TVD_12110 1af245b6384c87a63f8b66e98e39bcf9 361 Gene3D G3DSA:1.20.58.410 4 101 1.4E-5 T 11-10-2018 TVD_12110 1af245b6384c87a63f8b66e98e39bcf9 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TVD_12110 1af245b6384c87a63f8b66e98e39bcf9 361 SUPERFAMILY SSF75620 12 355 5.89E-134 T 11-10-2018 TVD_12110 1af245b6384c87a63f8b66e98e39bcf9 361 Gene3D G3DSA:3.30.160.20 212 299 1.8E-97 T 11-10-2018 TVD_12110 1af245b6384c87a63f8b66e98e39bcf9 361 Pfam PF03462 PCRF domain 13 205 3.4E-72 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 TVD_12110 1af245b6384c87a63f8b66e98e39bcf9 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.728 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 TVD_12110 1af245b6384c87a63f8b66e98e39bcf9 361 Gene3D G3DSA:3.30.70.1660 113 344 1.8E-97 T 11-10-2018 TVD_12110 1af245b6384c87a63f8b66e98e39bcf9 361 Pfam PF00472 RF-1 domain 217 323 2.1E-41 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 SUPERFAMILY SSF50677 211 410 9.52E-55 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 Gene3D G3DSA:1.10.730.20 647 940 3.0E-91 T 11-10-2018 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 65 76 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 22 848 4.3E-277 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 SUPERFAMILY SSF47323 659 939 2.8E-76 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 35 647 6.1E-207 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 Pfam PF08264 Anticodon-binding domain of tRNA 692 847 9.1E-29 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 Pfam PF06827 Zinc finger found in FPG and IleRS 910 936 6.9E-6 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 Gene3D G3DSA:3.90.740.10 202 415 1.7E-234 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 Gene3D G3DSA:3.40.50.620 32 636 1.7E-234 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 SUPERFAMILY SSF52374 11 654 1.78E-134 T 11-10-2018 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 9 939 21.238 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 246 269 2.3E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 568 577 2.3E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 408 423 2.3E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 58 69 2.3E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TVD_00570 3318de8b77b32b5df84ae9259504dbcd 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 533 546 2.3E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 Pfam PF00873 AcrB/AcrD/AcrF family 24 1087 1.5E-154 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 SUPERFAMILY SSF82693 55 150 1.15E-20 T 11-10-2018 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 SUPERFAMILY SSF82714 202 282 3.53E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 SUPERFAMILY SSF82693 602 717 1.49E-16 T 11-10-2018 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 Gene3D G3DSA:3.30.70.1430 55 863 4.8E-235 T 11-10-2018 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 SUPERFAMILY SSF82866 859 1092 6.93E-43 T 11-10-2018 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 SUPERFAMILY SSF82714 768 850 3.4E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 Gene3D G3DSA:3.30.2090.10 765 855 4.8E-235 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 SUPERFAMILY SSF82866 320 520 3.53E-39 T 11-10-2018 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 Gene3D G3DSA:1.20.1640.10 546 1086 4.8E-235 T 11-10-2018 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 Gene3D G3DSA:3.30.70.1440 717 931 4.8E-235 T 11-10-2018 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 Gene3D G3DSA:3.30.70.1430 606 716 4.8E-235 T 11-10-2018 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 PRINTS PR00702 Acriflavin resistance protein family signature 25 49 9.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 PRINTS PR00702 Acriflavin resistance protein family signature 415 439 9.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 9.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 PRINTS PR00702 Acriflavin resistance protein family signature 361 384 9.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 PRINTS PR00702 Acriflavin resistance protein family signature 494 517 9.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 PRINTS PR00702 Acriflavin resistance protein family signature 53 71 9.8E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 Gene3D G3DSA:3.30.2090.10 197 288 4.8E-235 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 Gene3D G3DSA:3.30.70.1320 151 355 4.8E-235 T 11-10-2018 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 Gene3D G3DSA:1.20.1640.10 31 545 4.8E-235 T 11-10-2018 TVD_10065 e47790874d1ea7effacf8b86dc8472e8 1101 SUPERFAMILY SSF82693 158 352 6.63E-10 T 11-10-2018 TVD_12975 a1bd041b34ba48bcf822556fe2655523 154 Gene3D G3DSA:3.40.1280.10 1 154 9.0E-63 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TVD_12975 a1bd041b34ba48bcf822556fe2655523 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.229 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 TVD_12975 a1bd041b34ba48bcf822556fe2655523 154 PIRSF PIRSF029256 1 154 2.5E-61 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 TVD_12975 a1bd041b34ba48bcf822556fe2655523 154 SUPERFAMILY SSF75217 1 152 2.09E-43 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TVD_12975 a1bd041b34ba48bcf822556fe2655523 154 Pfam PF00588 SpoU rRNA Methylase family 2 142 5.0E-32 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TVD_12380 04f5fea29896a6ffc74a616b153d5dc7 455 SUPERFAMILY SSF53633 24 304 8.94E-60 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TVD_12380 04f5fea29896a6ffc74a616b153d5dc7 455 Gene3D G3DSA:3.40.1160.10 24 304 2.2E-84 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TVD_12380 04f5fea29896a6ffc74a616b153d5dc7 455 PIRSF PIRSF000423 18 452 1.0E-160 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 TVD_12380 04f5fea29896a6ffc74a616b153d5dc7 455 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 25 452 4.2E-155 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 TVD_12380 04f5fea29896a6ffc74a616b153d5dc7 455 SUPERFAMILY SSF55729 305 425 2.4E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_12380 04f5fea29896a6ffc74a616b153d5dc7 455 Pfam PF00583 Acetyltransferase (GNAT) family 346 412 1.1E-8 T 11-10-2018 IPR000182 GNAT domain TVD_12380 04f5fea29896a6ffc74a616b153d5dc7 455 Pfam PF00696 Amino acid kinase family 41 279 1.3E-22 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TVD_12380 04f5fea29896a6ffc74a616b153d5dc7 455 Gene3D G3DSA:3.40.630.30 305 452 2.3E-37 T 11-10-2018 TVD_12380 04f5fea29896a6ffc74a616b153d5dc7 455 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 452 172.196 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 TVD_09180 401bf9a001f6d7333cf00a89cd1b2c06 84 Pfam PF02599 Global regulator protein family 1 52 3.0E-26 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TVD_09180 401bf9a001f6d7333cf00a89cd1b2c06 84 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 60 17.655 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TVD_09180 401bf9a001f6d7333cf00a89cd1b2c06 84 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 5.8E-28 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TVD_09180 401bf9a001f6d7333cf00a89cd1b2c06 84 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-19 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 TVD_09180 401bf9a001f6d7333cf00a89cd1b2c06 84 SUPERFAMILY SSF117130 1 54 2.48E-20 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 TVD_09180 401bf9a001f6d7333cf00a89cd1b2c06 84 Gene3D G3DSA:3.30.70.1680 1 59 9.2E-29 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 TVD_03775 2d3203e19d34001a5f47fe4626894274 204 Gene3D G3DSA:3.30.70.1810 104 201 8.1E-33 T 11-10-2018 TVD_03775 2d3203e19d34001a5f47fe4626894274 204 Pfam PF00936 BMC domain 142 198 2.0E-6 T 11-10-2018 IPR000249 Microcompartment protein, bacteria TVD_03775 2d3203e19d34001a5f47fe4626894274 204 SMART SM00877 138 203 2.7E-12 T 11-10-2018 IPR000249 Microcompartment protein, bacteria TVD_03775 2d3203e19d34001a5f47fe4626894274 204 Gene3D G3DSA:3.30.70.1810 2 103 6.8E-42 T 11-10-2018 TVD_03775 2d3203e19d34001a5f47fe4626894274 204 SUPERFAMILY SSF143414 138 200 8.11E-9 T 11-10-2018 IPR037233 CcmK-like superfamily TVD_11025 35489698992b47504242882fdf645646 234 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 4.0E-7 T 11-10-2018 TVD_11025 35489698992b47504242882fdf645646 234 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 29 201 6.3E-57 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TVD_11025 35489698992b47504242882fdf645646 234 SUPERFAMILY SSF55681 5 201 3.4E-65 T 11-10-2018 TVD_11025 35489698992b47504242882fdf645646 234 PIRSF PIRSF016262 2 210 1.1E-54 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TVD_11025 35489698992b47504242882fdf645646 234 Gene3D G3DSA:3.30.930.10 2 205 4.4E-64 T 11-10-2018 TVD_11025 35489698992b47504242882fdf645646 234 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TVD_11025 35489698992b47504242882fdf645646 234 Hamap MF_00013 Octanoyltransferase [lipB]. 5 207 35.269 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TVD_11025 35489698992b47504242882fdf645646 234 Pfam PF03099 Biotin/lipoate A/B protein ligase family 55 156 1.3E-7 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 SMART SM00228 378 457 7.1E-4 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 SMART SM00228 261 343 5.9E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 SUPERFAMILY SSF50156 378 465 3.42E-12 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 23 463 9.6E-147 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 Gene3D G3DSA:2.30.42.10 256 360 2.7E-25 T 11-10-2018 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 Gene3D G3DSA:2.40.10.120 22 255 5.8E-81 T 11-10-2018 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 Gene3D G3DSA:2.30.42.60 370 469 4.1E-16 T 11-10-2018 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 Pfam PF13365 Trypsin-like peptidase domain 89 222 4.5E-34 T 11-10-2018 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 SUPERFAMILY SSF50494 21 253 8.46E-67 T 11-10-2018 IPR009003 Peptidase S1, PA clan TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 Pfam PF13180 PDZ domain 389 463 4.2E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 Pfam PF13180 PDZ domain 262 351 8.1E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 SUPERFAMILY SSF50156 219 343 1.97E-22 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 PRINTS PR00834 HtrA/DegQ protease family signature 159 183 6.0E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 PRINTS PR00834 HtrA/DegQ protease family signature 119 139 6.0E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 PRINTS PR00834 HtrA/DegQ protease family signature 301 313 6.0E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 PRINTS PR00834 HtrA/DegQ protease family signature 98 110 6.0E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 PRINTS PR00834 HtrA/DegQ protease family signature 215 232 6.0E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_10950 88bb66ddbf9d540f8af980c82a8a46ef 469 PRINTS PR00834 HtrA/DegQ protease family signature 193 210 6.0E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_04680 8f14c7040c98d72f6903a441d911c67f 1517 Pfam PF02514 CobN/Magnesium Chelatase 603 922 5.0E-73 T 11-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 TVD_04680 8f14c7040c98d72f6903a441d911c67f 1517 Pfam PF02514 CobN/Magnesium Chelatase 941 1389 1.8E-108 T 11-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 TVD_04680 8f14c7040c98d72f6903a441d911c67f 1517 Pfam PF02514 CobN/Magnesium Chelatase 174 513 2.5E-52 T 11-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 TVD_11970 7d5ac926ed2bac0fe17173d7708b0dfb 262 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 7 251 6.4E-68 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TVD_11970 7d5ac926ed2bac0fe17173d7708b0dfb 262 SUPERFAMILY SSF53613 4 256 1.47E-71 T 11-10-2018 IPR029056 Ribokinase-like TVD_11970 7d5ac926ed2bac0fe17173d7708b0dfb 262 Pfam PF08543 Phosphomethylpyrimidine kinase 14 251 6.2E-76 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 TVD_11970 7d5ac926ed2bac0fe17173d7708b0dfb 262 Gene3D G3DSA:3.40.1190.20 1 260 2.9E-87 T 11-10-2018 IPR029056 Ribokinase-like TVD_11975 567c796f4d18ab80a1bdf5dd7cb085fd 214 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 10 214 26.235 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TVD_11975 567c796f4d18ab80a1bdf5dd7cb085fd 214 Pfam PF02581 Thiamine monophosphate synthase 12 196 1.9E-54 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TVD_11975 567c796f4d18ab80a1bdf5dd7cb085fd 214 SUPERFAMILY SSF51391 7 212 1.02E-61 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TVD_11975 567c796f4d18ab80a1bdf5dd7cb085fd 214 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 12 208 2.0E-55 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TVD_11975 567c796f4d18ab80a1bdf5dd7cb085fd 214 Gene3D G3DSA:3.20.20.70 1 214 8.1E-61 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_00955 51c6801bc229af866dca7fe0267ef70b 276 Pfam PF00459 Inositol monophosphatase family 12 253 6.4E-39 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_00955 51c6801bc229af866dca7fe0267ef70b 276 Gene3D G3DSA:3.40.190.80 155 265 1.6E-18 T 11-10-2018 TVD_00955 51c6801bc229af866dca7fe0267ef70b 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 4.3E-19 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_00955 51c6801bc229af866dca7fe0267ef70b 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 4.3E-19 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_00955 51c6801bc229af866dca7fe0267ef70b 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 4.3E-19 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_00955 51c6801bc229af866dca7fe0267ef70b 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 181 202 4.3E-19 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_00955 51c6801bc229af866dca7fe0267ef70b 276 SUPERFAMILY SSF56655 10 266 2.09E-52 T 11-10-2018 TVD_00955 51c6801bc229af866dca7fe0267ef70b 276 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 215 229 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 TVD_00955 51c6801bc229af866dca7fe0267ef70b 276 Gene3D G3DSA:3.30.540.10 12 151 1.4E-31 T 11-10-2018 TVD_12565 eb93fe790b60b689f28c7c09ac2b8ea4 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TVD_12565 eb93fe790b60b689f28c7c09ac2b8ea4 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TVD_12565 eb93fe790b60b689f28c7c09ac2b8ea4 354 Gene3D G3DSA:3.20.20.70 1 354 1.1E-148 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_12565 eb93fe790b60b689f28c7c09ac2b8ea4 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 2.9E-89 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TVD_12565 eb93fe790b60b689f28c7c09ac2b8ea4 354 PIRSF PIRSF001359 1 329 3.4E-79 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TVD_12565 eb93fe790b60b689f28c7c09ac2b8ea4 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 328 5.3E-95 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 TVD_12565 eb93fe790b60b689f28c7c09ac2b8ea4 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 1.2E-193 T 11-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 TVD_12565 eb93fe790b60b689f28c7c09ac2b8ea4 354 SUPERFAMILY SSF51569 3 328 2.49E-104 T 11-10-2018 TVD_10675 90464d1463f7ca33bd2dbcacb966563c 602 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 4 583 6.7E-242 T 11-10-2018 IPR030998 Thiosulfohydrolase SoxB TVD_10675 90464d1463f7ca33bd2dbcacb966563c 602 PRINTS PR01607 Apyrase family signature 273 290 6.3E-11 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TVD_10675 90464d1463f7ca33bd2dbcacb966563c 602 PRINTS PR01607 Apyrase family signature 292 315 6.3E-11 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TVD_10675 90464d1463f7ca33bd2dbcacb966563c 602 PRINTS PR01607 Apyrase family signature 46 64 6.3E-11 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TVD_10675 90464d1463f7ca33bd2dbcacb966563c 602 PRINTS PR01607 Apyrase family signature 325 345 6.3E-11 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TVD_10675 90464d1463f7ca33bd2dbcacb966563c 602 Gene3D G3DSA:3.90.780.10 398 591 6.1E-68 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TVD_10675 90464d1463f7ca33bd2dbcacb966563c 602 Pfam PF02872 5'-nucleotidase, C-terminal domain 415 540 1.3E-14 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TVD_10675 90464d1463f7ca33bd2dbcacb966563c 602 SUPERFAMILY SSF56300 44 380 4.05E-74 T 11-10-2018 TVD_10675 90464d1463f7ca33bd2dbcacb966563c 602 Gene3D G3DSA:3.60.21.10 104 383 8.2E-74 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TVD_10675 90464d1463f7ca33bd2dbcacb966563c 602 SUPERFAMILY SSF55816 395 568 3.4E-28 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TVD_11485 1801f55aecb29fb817e85527c941d900 201 Gene3D G3DSA:1.10.287.110 141 200 5.5E-15 T 11-10-2018 IPR036869 Chaperone J-domain superfamily TVD_11485 1801f55aecb29fb817e85527c941d900 201 SUPERFAMILY SSF46565 143 197 4.19E-13 T 11-10-2018 IPR036869 Chaperone J-domain superfamily TVD_11485 1801f55aecb29fb817e85527c941d900 201 Pfam PF12339 DNA-J related protein 16 140 1.1E-37 T 11-10-2018 IPR021059 DnaJ-related protein, N-terminal TVD_11485 1801f55aecb29fb817e85527c941d900 201 Pfam PF00226 DnaJ domain 152 197 1.7E-7 T 11-10-2018 IPR001623 DnaJ domain TVD_11485 1801f55aecb29fb817e85527c941d900 201 SMART SM00271 148 200 0.0018 T 11-10-2018 IPR001623 DnaJ domain TVD_00175 fd1ddfcd8bf4efe0d25f2ce8e098a235 352 Pfam PF14815 NUDIX domain 234 341 2.7E-16 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 TVD_00175 fd1ddfcd8bf4efe0d25f2ce8e098a235 352 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 33 163 2.4E-17 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TVD_00175 fd1ddfcd8bf4efe0d25f2ce8e098a235 352 SUPERFAMILY SSF48150 2 222 1.52E-71 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TVD_00175 fd1ddfcd8bf4efe0d25f2ce8e098a235 352 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 271 1.7E-106 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 TVD_00175 fd1ddfcd8bf4efe0d25f2ce8e098a235 352 Pfam PF00633 Helix-hairpin-helix motif 97 124 1.9E-6 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 TVD_00175 fd1ddfcd8bf4efe0d25f2ce8e098a235 352 SUPERFAMILY SSF55811 218 340 1.31E-12 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TVD_00175 fd1ddfcd8bf4efe0d25f2ce8e098a235 352 Gene3D G3DSA:1.10.1670.10 7 209 3.6E-85 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 TVD_00175 fd1ddfcd8bf4efe0d25f2ce8e098a235 352 SMART SM00478 37 188 4.2E-43 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TVD_00175 fd1ddfcd8bf4efe0d25f2ce8e098a235 352 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 TVD_00175 fd1ddfcd8bf4efe0d25f2ce8e098a235 352 Gene3D G3DSA:1.10.340.30 19 130 3.6E-85 T 11-10-2018 TVD_01760 58bbabd223468d97b15859301c3c2ff5 626 SUPERFAMILY SSF52540 24 244 5.6E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01760 58bbabd223468d97b15859301c3c2ff5 626 Pfam PF05036 Sporulation related domain 544 615 3.7E-7 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 TVD_01760 58bbabd223468d97b15859301c3c2ff5 626 Gene3D G3DSA:3.30.70.1070 522 625 7.6E-23 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TVD_03150 330eaa232be72d376b3004e29b28311f 322 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site TVD_03150 330eaa232be72d376b3004e29b28311f 322 SUPERFAMILY SSF48576 6 321 3.84E-100 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily TVD_03150 330eaa232be72d376b3004e29b28311f 322 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site TVD_03150 330eaa232be72d376b3004e29b28311f 322 Gene3D G3DSA:1.10.600.10 1 322 3.0E-114 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily TVD_03150 330eaa232be72d376b3004e29b28311f 322 Pfam PF00348 Polyprenyl synthetase 32 269 1.6E-77 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 TVD_00065 2dd43067e205d47888e629bc5b527f2b 267 Gene3D G3DSA:3.20.20.70 2 265 2.1E-122 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_00065 2dd43067e205d47888e629bc5b527f2b 267 Hamap MF_00443 Thiazole synthase [thiG]. 11 266 43.336 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 TVD_00065 2dd43067e205d47888e629bc5b527f2b 267 Pfam PF05690 Thiazole biosynthesis protein ThiG 14 260 7.0E-113 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 TVD_00065 2dd43067e205d47888e629bc5b527f2b 267 SUPERFAMILY SSF110399 10 250 3.27E-90 T 11-10-2018 TVD_08025 950a4b9864f3e1455d167682566b5af9 310 Pfam PF12852 Cupin 8 182 6.4E-39 T 11-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain TVD_08025 950a4b9864f3e1455d167682566b5af9 310 SUPERFAMILY SSF46689 252 300 1.16E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_08025 950a4b9864f3e1455d167682566b5af9 310 SUPERFAMILY SSF46689 199 250 2.33E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_08025 950a4b9864f3e1455d167682566b5af9 310 Pfam PF12833 Helix-turn-helix domain 222 300 4.7E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TVD_08025 950a4b9864f3e1455d167682566b5af9 310 SMART SM00342 216 299 7.2E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TVD_08025 950a4b9864f3e1455d167682566b5af9 310 Gene3D G3DSA:1.10.10.60 197 250 1.4E-9 T 11-10-2018 TVD_08025 950a4b9864f3e1455d167682566b5af9 310 Gene3D G3DSA:1.10.10.60 251 304 5.6E-11 T 11-10-2018 TVD_01845 51fb981b5c44874cf2306b6fcff29e34 296 Pfam PF00294 pfkB family carbohydrate kinase 1 280 1.5E-35 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB TVD_01845 51fb981b5c44874cf2306b6fcff29e34 296 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 239 252 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TVD_01845 51fb981b5c44874cf2306b6fcff29e34 296 SUPERFAMILY SSF53613 1 280 1.71E-50 T 11-10-2018 IPR029056 Ribokinase-like TVD_01845 51fb981b5c44874cf2306b6fcff29e34 296 Gene3D G3DSA:3.40.1190.20 2 285 8.2E-71 T 11-10-2018 IPR029056 Ribokinase-like TVD_08040 803df8efee022a3e27fdbe36b8ce158b 233 SUPERFAMILY SSF46548 103 231 9.94E-39 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_08040 803df8efee022a3e27fdbe36b8ce158b 233 Gene3D G3DSA:3.10.20.30 1 102 9.0E-31 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TVD_08040 803df8efee022a3e27fdbe36b8ce158b 233 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_08040 803df8efee022a3e27fdbe36b8ce158b 233 Gene3D G3DSA:1.10.1060.10 103 233 1.3E-57 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_08040 803df8efee022a3e27fdbe36b8ce158b 233 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 5 225 3.5E-78 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08040 803df8efee022a3e27fdbe36b8ce158b 233 SUPERFAMILY SSF54292 2 102 1.13E-25 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 TVD_08040 803df8efee022a3e27fdbe36b8ce158b 233 Pfam PF13183 4Fe-4S dicluster domain 141 214 2.5E-11 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TVD_08040 803df8efee022a3e27fdbe36b8ce158b 233 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 3 108 7.9E-29 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_04475 7590dcd27423a01c586773e94b102192 115 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 111 1.5E-25 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like TVD_11935 43297c50970a42318a1957e4143b22b6 351 SUPERFAMILY SSF55347 157 319 9.42E-51 T 11-10-2018 TVD_11935 43297c50970a42318a1957e4143b22b6 351 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 168 322 5.7E-18 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TVD_11935 43297c50970a42318a1957e4143b22b6 351 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 152 168 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TVD_11935 43297c50970a42318a1957e4143b22b6 351 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 10 351 2.8E-129 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TVD_11935 43297c50970a42318a1957e4143b22b6 351 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 10 345 43.489 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TVD_11935 43297c50970a42318a1957e4143b22b6 351 Gene3D G3DSA:3.30.360.10 155 319 5.8E-131 T 11-10-2018 TVD_11935 43297c50970a42318a1957e4143b22b6 351 Gene3D G3DSA:3.40.50.720 11 337 5.8E-131 T 11-10-2018 TVD_11935 43297c50970a42318a1957e4143b22b6 351 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 11 148 1.3E-36 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TVD_11935 43297c50970a42318a1957e4143b22b6 351 SUPERFAMILY SSF51735 8 183 4.65E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_11935 43297c50970a42318a1957e4143b22b6 351 SMART SM00859 11 149 4.4E-58 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TVD_11820 ebca2b5f5b03dc153ce6e39fcee3d0a4 450 Pfam PF02754 Cysteine-rich domain 210 295 8.3E-10 T 11-10-2018 IPR004017 Cysteine-rich domain TVD_11820 ebca2b5f5b03dc153ce6e39fcee3d0a4 450 Pfam PF02754 Cysteine-rich domain 342 418 0.17 T 11-10-2018 IPR004017 Cysteine-rich domain TVD_11820 ebca2b5f5b03dc153ce6e39fcee3d0a4 450 SUPERFAMILY SSF54862 40 101 3.14E-5 T 11-10-2018 TVD_11340 9cef1610ee26a27711ee1a2a0c97e2b9 126 Gene3D G3DSA:2.40.40.20 1 126 4.0E-52 T 11-10-2018 TVD_11340 9cef1610ee26a27711ee1a2a0c97e2b9 126 SUPERFAMILY SSF50692 1 116 2.98E-46 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily TVD_11340 9cef1610ee26a27711ee1a2a0c97e2b9 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 2.0E-39 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 TVD_11340 9cef1610ee26a27711ee1a2a0c97e2b9 126 PIRSF PIRSF006246 1 125 4.1E-48 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 TVD_11340 9cef1610ee26a27711ee1a2a0c97e2b9 126 Pfam PF02261 Aspartate decarboxylase 1 114 8.9E-48 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 TVD_11340 9cef1610ee26a27711ee1a2a0c97e2b9 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 69.601 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 TVD_11340 9cef1610ee26a27711ee1a2a0c97e2b9 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 7.3E-47 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 TVD_02170 72c1c7210afc445f18599f3c89faf023 449 Gene3D G3DSA:3.40.1190.10 96 309 3.8E-61 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TVD_02170 72c1c7210afc445f18599f3c89faf023 449 SUPERFAMILY SSF53244 309 447 5.26E-46 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TVD_02170 72c1c7210afc445f18599f3c89faf023 449 SUPERFAMILY SSF53623 100 307 2.75E-50 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TVD_02170 72c1c7210afc445f18599f3c89faf023 449 Gene3D G3DSA:3.40.50.720 3 94 1.7E-15 T 11-10-2018 TVD_02170 72c1c7210afc445f18599f3c89faf023 449 SUPERFAMILY SSF51984 2 94 1.12E-11 T 11-10-2018 TVD_02170 72c1c7210afc445f18599f3c89faf023 449 Pfam PF08245 Mur ligase middle domain 112 286 3.2E-29 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TVD_02170 72c1c7210afc445f18599f3c89faf023 449 Gene3D G3DSA:3.90.190.20 315 449 1.2E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TVD_02170 72c1c7210afc445f18599f3c89faf023 449 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 445 1.9E-119 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TVD_02170 72c1c7210afc445f18599f3c89faf023 449 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 6 447 33.167 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 TVD_02170 72c1c7210afc445f18599f3c89faf023 449 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 383 1.4E-5 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TVD_04675 ceb4044f72dfb3171384f3ed57325872 184 Gene3D G3DSA:1.20.1200.10 17 182 8.9E-59 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TVD_04675 ceb4044f72dfb3171384f3ed57325872 184 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 178 1.5E-58 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TVD_04675 ceb4044f72dfb3171384f3ed57325872 184 Pfam PF01923 Cobalamin adenosyltransferase 8 165 3.2E-55 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TVD_04675 ceb4044f72dfb3171384f3ed57325872 184 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 14 177 2.0E-48 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TVD_04675 ceb4044f72dfb3171384f3ed57325872 184 SUPERFAMILY SSF89028 7 178 2.35E-57 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 TVD_04340 e3a4a349121433340696cb9c421447e9 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 39 57 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 TVD_04340 e3a4a349121433340696cb9c421447e9 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 290 1.3E-70 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TVD_04340 e3a4a349121433340696cb9c421447e9 303 Gene3D G3DSA:3.40.50.1100 17 297 1.1E-111 T 11-10-2018 TVD_04340 e3a4a349121433340696cb9c421447e9 303 TIGRFAM TIGR01138 cysM: cysteine synthase B 12 301 2.4E-144 T 11-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 TVD_04340 e3a4a349121433340696cb9c421447e9 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 14 301 2.0E-123 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 TVD_04340 e3a4a349121433340696cb9c421447e9 303 Gene3D G3DSA:3.40.50.1100 44 149 1.1E-111 T 11-10-2018 TVD_04340 e3a4a349121433340696cb9c421447e9 303 SUPERFAMILY SSF53686 6 298 5.5E-95 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TVD_00945 88a63141685040f843fc69d67c3673bc 373 SMART SM00028 294 327 3.0E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_00945 88a63141685040f843fc69d67c3673bc 373 SUPERFAMILY SSF48452 283 331 2.53E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_00945 88a63141685040f843fc69d67c3673bc 373 Gene3D G3DSA:1.25.40.10 196 349 4.1E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_00945 88a63141685040f843fc69d67c3673bc 373 Pfam PF07719 Tetratricopeptide repeat 294 327 2.8E-6 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 TVD_06410 6d1ecebffae9645a6b0b87a687eefe4b 1009 SUPERFAMILY SSF50249 40 123 7.2E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_06410 6d1ecebffae9645a6b0b87a687eefe4b 1009 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 4.2E-162 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 TVD_06410 6d1ecebffae9645a6b0b87a687eefe4b 1009 Gene3D G3DSA:3.40.1260.20 398 507 3.6E-36 T 11-10-2018 TVD_06410 6d1ecebffae9645a6b0b87a687eefe4b 1009 Pfam PF10150 Ribonuclease E/G family 119 388 4.4E-95 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 TVD_06410 6d1ecebffae9645a6b0b87a687eefe4b 1009 Pfam PF00575 S1 RNA binding domain 37 116 3.2E-8 T 11-10-2018 IPR003029 S1 domain GO:0003676 TVD_06410 6d1ecebffae9645a6b0b87a687eefe4b 1009 Gene3D G3DSA:2.40.50.140 32 123 4.1E-29 T 11-10-2018 TVD_06410 6d1ecebffae9645a6b0b87a687eefe4b 1009 Hamap MF_00970 Ribonuclease E [rne]. 1 1006 30.774 T 11-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 TVD_06410 6d1ecebffae9645a6b0b87a687eefe4b 1009 SMART SM00316 37 117 1.0E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 TVD_13035 7616bfc42925b09df5e4b5b49efa7eae 207 Gene3D G3DSA:1.10.760.10 29 105 1.2E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_13035 7616bfc42925b09df5e4b5b49efa7eae 207 Gene3D G3DSA:1.10.760.10 107 204 7.8E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_13035 7616bfc42925b09df5e4b5b49efa7eae 207 Pfam PF00034 Cytochrome c 29 102 3.7E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_13035 7616bfc42925b09df5e4b5b49efa7eae 207 Pfam PF00034 Cytochrome c 116 203 3.5E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_13035 7616bfc42925b09df5e4b5b49efa7eae 207 SUPERFAMILY SSF46626 113 202 3.87E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_13035 7616bfc42925b09df5e4b5b49efa7eae 207 PIRSF PIRSF000005 1 205 1.0E-62 T 11-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 TVD_13035 7616bfc42925b09df5e4b5b49efa7eae 207 SUPERFAMILY SSF46626 6 104 1.26E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_10745 ba78a7372f157da693ef6c52898b76db 96 Gene3D G3DSA:3.30.460.10 3 95 1.9E-19 T 11-10-2018 TVD_10745 ba78a7372f157da693ef6c52898b76db 96 Pfam PF01909 Nucleotidyltransferase domain 14 86 3.7E-8 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TVD_10745 ba78a7372f157da693ef6c52898b76db 96 SUPERFAMILY SSF81301 3 95 6.22E-17 T 11-10-2018 TVD_10720 fe46fd4f2c8b7280004986366e8927f0 1064 Gene3D G3DSA:3.40.50.300 519 748 6.2E-22 T 11-10-2018 TVD_10720 fe46fd4f2c8b7280004986366e8927f0 1064 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 71 179 4.2E-11 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 TVD_10720 fe46fd4f2c8b7280004986366e8927f0 1064 SMART SM00487 285 519 2.1E-9 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_10720 fe46fd4f2c8b7280004986366e8927f0 1064 SUPERFAMILY SSF52540 288 525 1.06E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10720 fe46fd4f2c8b7280004986366e8927f0 1064 Pfam PF04851 Type III restriction enzyme, res subunit 290 450 1.2E-12 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TVD_10720 fe46fd4f2c8b7280004986366e8927f0 1064 Gene3D G3DSA:3.40.50.300 290 500 1.0E-21 T 11-10-2018 TVD_10720 fe46fd4f2c8b7280004986366e8927f0 1064 Gene3D G3DSA:3.90.1570.50 109 179 3.1E-5 T 11-10-2018 TVD_11795 3d5390614e8aa4329c3295720dc9c652 428 Pfam PF01595 Domain of unknown function DUF21 13 181 2.7E-46 T 11-10-2018 IPR002550 CNNM, transmembrane domain TVD_11795 3d5390614e8aa4329c3295720dc9c652 428 Pfam PF03471 Transporter associated domain 341 415 2.1E-16 T 11-10-2018 IPR005170 Transporter-associated domain TVD_11795 3d5390614e8aa4329c3295720dc9c652 428 SUPERFAMILY SSF54631 200 344 2.32E-28 T 11-10-2018 TVD_11795 3d5390614e8aa4329c3295720dc9c652 428 SMART SM01091 340 418 4.2E-21 T 11-10-2018 IPR005170 Transporter-associated domain TVD_11795 3d5390614e8aa4329c3295720dc9c652 428 Gene3D G3DSA:3.10.580.10 186 338 1.8E-43 T 11-10-2018 TVD_11795 3d5390614e8aa4329c3295720dc9c652 428 Pfam PF00571 CBS domain 298 325 7.5E-4 T 11-10-2018 IPR000644 CBS domain TVD_11795 3d5390614e8aa4329c3295720dc9c652 428 Pfam PF00571 CBS domain 204 258 9.2E-6 T 11-10-2018 IPR000644 CBS domain TVD_11795 3d5390614e8aa4329c3295720dc9c652 428 Gene3D G3DSA:3.30.465.10 339 416 4.4E-25 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TVD_11795 3d5390614e8aa4329c3295720dc9c652 428 SUPERFAMILY SSF56176 338 419 1.01E-19 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TVD_05760 63196ce0f7e2556a22684871f456030e 267 SUPERFAMILY SSF102215 8 259 3.66E-63 T 11-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 TVD_05760 63196ce0f7e2556a22684871f456030e 267 Pfam PF02633 Creatinine amidohydrolase 13 253 3.0E-59 T 11-10-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 TVD_05760 63196ce0f7e2556a22684871f456030e 267 Gene3D G3DSA:3.40.50.10310 4 259 1.0E-62 T 11-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 TVD_13595 fcfdab70b31addad5faa81bdc218bfb8 444 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 435 34.354 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 TVD_13595 fcfdab70b31addad5faa81bdc218bfb8 444 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 301 335 1.7E-5 T 11-10-2018 IPR001451 Hexapeptide repeat TVD_13595 fcfdab70b31addad5faa81bdc218bfb8 444 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 252 282 3.2E-5 T 11-10-2018 IPR001451 Hexapeptide repeat TVD_13595 fcfdab70b31addad5faa81bdc218bfb8 444 SUPERFAMILY SSF51161 239 420 1.31E-48 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily TVD_13595 fcfdab70b31addad5faa81bdc218bfb8 444 Gene3D G3DSA:3.90.550.10 1 210 1.2E-41 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_13595 fcfdab70b31addad5faa81bdc218bfb8 444 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 386 414 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 TVD_13595 fcfdab70b31addad5faa81bdc218bfb8 444 SUPERFAMILY SSF53448 1 224 2.48E-43 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_13595 fcfdab70b31addad5faa81bdc218bfb8 444 Gene3D G3DSA:2.160.10.10 211 438 2.0E-61 T 11-10-2018 TVD_13595 fcfdab70b31addad5faa81bdc218bfb8 444 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 1 437 7.1E-151 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 TVD_13595 fcfdab70b31addad5faa81bdc218bfb8 444 Pfam PF12804 MobA-like NTP transferase domain 4 114 2.3E-11 T 11-10-2018 IPR025877 MobA-like NTP transferase TVD_13595 fcfdab70b31addad5faa81bdc218bfb8 444 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 378 410 2.9E-7 T 11-10-2018 IPR001451 Hexapeptide repeat TVD_13335 5037958d37ac7a5ab4651bfb843c06c4 539 Pfam PF00672 HAMP domain 210 258 6.0E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_13335 5037958d37ac7a5ab4651bfb843c06c4 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 505 6.5E-46 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_13335 5037958d37ac7a5ab4651bfb843c06c4 539 SMART SM00304 208 262 7.4E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_13335 5037958d37ac7a5ab4651bfb843c06c4 539 SMART SM00304 263 315 76.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_13335 5037958d37ac7a5ab4651bfb843c06c4 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 7.7E-8 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_13335 5037958d37ac7a5ab4651bfb843c06c4 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 291 320 7.7E-8 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_13335 5037958d37ac7a5ab4651bfb843c06c4 539 Gene3D G3DSA:1.10.287.950 208 539 1.2E-78 T 11-10-2018 TVD_13335 5037958d37ac7a5ab4651bfb843c06c4 539 SMART SM00283 277 538 2.4E-85 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_13335 5037958d37ac7a5ab4651bfb843c06c4 539 SUPERFAMILY SSF58104 230 539 3.4E-81 T 11-10-2018 TVD_08180 555879b69c04d5d6717ec8ee67dd8510 1064 Pfam PF04851 Type III restriction enzyme, res subunit 290 450 1.1E-12 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TVD_08180 555879b69c04d5d6717ec8ee67dd8510 1064 SMART SM00487 285 519 8.4E-9 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_08180 555879b69c04d5d6717ec8ee67dd8510 1064 SUPERFAMILY SSF52540 288 525 2.33E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_08180 555879b69c04d5d6717ec8ee67dd8510 1064 Gene3D G3DSA:3.40.50.300 519 748 1.8E-22 T 11-10-2018 TVD_08180 555879b69c04d5d6717ec8ee67dd8510 1064 Gene3D G3DSA:3.40.50.300 290 500 1.0E-21 T 11-10-2018 TVD_08180 555879b69c04d5d6717ec8ee67dd8510 1064 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 65 190 1.5E-11 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 TVD_08180 555879b69c04d5d6717ec8ee67dd8510 1064 Gene3D G3DSA:3.90.1570.50 110 179 3.5E-5 T 11-10-2018 TVD_00285 261ca85952c3b7ae1222e4d7d1b6f1b7 300 SUPERFAMILY SSF69572 10 272 3.14E-50 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 TVD_00285 261ca85952c3b7ae1222e4d7d1b6f1b7 300 Pfam PF00899 ThiF family 19 258 5.0E-38 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 TVD_00285 261ca85952c3b7ae1222e4d7d1b6f1b7 300 Gene3D G3DSA:3.40.50.720 5 270 7.5E-44 T 11-10-2018 TVD_13230 ff251d3fc585cafb0f9e8b0d8fe1c14c 319 Gene3D G3DSA:3.60.15.10 36 272 1.8E-40 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_13230 ff251d3fc585cafb0f9e8b0d8fe1c14c 319 SUPERFAMILY SSF56281 7 295 1.02E-44 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_13230 ff251d3fc585cafb0f9e8b0d8fe1c14c 319 Pfam PF00753 Metallo-beta-lactamase superfamily 65 236 9.7E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_13230 ff251d3fc585cafb0f9e8b0d8fe1c14c 319 SMART SM00849 61 247 8.0E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_10600 4575068120fed66671f2a07d9df8e31a 363 Gene3D G3DSA:3.30.390.50 261 351 9.2E-20 T 11-10-2018 TVD_10600 4575068120fed66671f2a07d9df8e31a 363 Gene3D G3DSA:3.30.930.10 9 260 7.6E-56 T 11-10-2018 TVD_10600 4575068120fed66671f2a07d9df8e31a 363 SUPERFAMILY SSF55681 8 256 8.52E-63 T 11-10-2018 TVD_13775 0a892e3422a6d5c3b6e509a966c2a136 485 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site TVD_13775 0a892e3422a6d5c3b6e509a966c2a136 485 Pfam PF00474 Sodium:solute symporter family 43 432 4.3E-34 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 TVD_13775 0a892e3422a6d5c3b6e509a966c2a136 485 Gene3D G3DSA:1.20.1730.10 15 472 3.4E-60 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily TVD_13775 0a892e3422a6d5c3b6e509a966c2a136 485 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site TVD_07980 cef2556b4cdda02985f23f35fe35a75c 134 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 47 130 1.2E-36 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 TVD_07980 cef2556b4cdda02985f23f35fe35a75c 134 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 40 8.2E-17 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TVD_07980 cef2556b4cdda02985f23f35fe35a75c 134 ProSitePatterns PS00938 Initiation factor 3 signature. 22 35 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 TVD_07980 cef2556b4cdda02985f23f35fe35a75c 134 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 134 5.4E-58 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TVD_07980 cef2556b4cdda02985f23f35fe35a75c 134 Gene3D G3DSA:3.10.20.80 1 39 3.9E-18 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TVD_07980 cef2556b4cdda02985f23f35fe35a75c 134 SUPERFAMILY SSF54364 1 42 2.62E-16 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 TVD_07980 cef2556b4cdda02985f23f35fe35a75c 134 Gene3D G3DSA:3.30.110.10 40 134 1.4E-35 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 TVD_07980 cef2556b4cdda02985f23f35fe35a75c 134 SUPERFAMILY SSF55200 47 133 3.01E-32 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 TVD_13730 d50ae9a323b0a0735ae687b65b33ce5d 118 Pfam PF07883 Cupin domain 39 105 1.8E-17 T 11-10-2018 IPR013096 Cupin 2, conserved barrel TVD_13730 d50ae9a323b0a0735ae687b65b33ce5d 118 Gene3D G3DSA:2.60.120.10 2 116 4.9E-26 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TVD_13730 d50ae9a323b0a0735ae687b65b33ce5d 118 SUPERFAMILY SSF51182 12 116 3.66E-29 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TVD_10340 bf5adf74eb162c38918112d9b02bcbf1 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 2.2E-20 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 TVD_10340 bf5adf74eb162c38918112d9b02bcbf1 426 SUPERFAMILY SSF57716 14 49 7.41E-12 T 11-10-2018 TVD_10340 bf5adf74eb162c38918112d9b02bcbf1 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 414 52.837 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 TVD_10340 bf5adf74eb162c38918112d9b02bcbf1 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 316 390 1.0E-16 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TVD_10340 bf5adf74eb162c38918112d9b02bcbf1 426 Gene3D G3DSA:3.40.50.300 57 314 2.4E-107 T 11-10-2018 TVD_10340 bf5adf74eb162c38918112d9b02bcbf1 426 SMART SM01086 316 410 5.3E-35 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TVD_10340 bf5adf74eb162c38918112d9b02bcbf1 426 SMART SM00994 13 52 1.8E-24 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 TVD_10340 bf5adf74eb162c38918112d9b02bcbf1 426 SUPERFAMILY SSF52540 62 400 8.87E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10340 bf5adf74eb162c38918112d9b02bcbf1 426 Gene3D G3DSA:1.10.8.60 315 423 6.7E-43 T 11-10-2018 TVD_10340 bf5adf74eb162c38918112d9b02bcbf1 426 SMART SM00382 111 379 7.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_10340 bf5adf74eb162c38918112d9b02bcbf1 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 11 410 1.9E-205 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 TVD_10340 bf5adf74eb162c38918112d9b02bcbf1 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 309 7.7E-49 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_10340 bf5adf74eb162c38918112d9b02bcbf1 426 Gene3D G3DSA:3.30.50.30 4 53 2.1E-25 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily TVD_08600 801656e00a5885966c050f3362d97116 205 Gene3D G3DSA:1.10.10.10 1 68 2.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_08600 801656e00a5885966c050f3362d97116 205 Pfam PF00717 Peptidase S24-like 116 182 5.9E-16 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TVD_08600 801656e00a5885966c050f3362d97116 205 SUPERFAMILY SSF46785 2 68 1.91E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_08600 801656e00a5885966c050f3362d97116 205 Hamap MF_00015 LexA repressor [lexA]. 2 201 32.236 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 TVD_08600 801656e00a5885966c050f3362d97116 205 Gene3D G3DSA:2.10.109.10 82 202 2.1E-42 T 11-10-2018 TVD_08600 801656e00a5885966c050f3362d97116 205 SUPERFAMILY SSF51306 77 199 1.29E-36 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TVD_08600 801656e00a5885966c050f3362d97116 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 124 135 2.7E-12 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 TVD_08600 801656e00a5885966c050f3362d97116 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 152 164 2.7E-12 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 TVD_08600 801656e00a5885966c050f3362d97116 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 113 123 2.7E-12 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 TVD_08600 801656e00a5885966c050f3362d97116 205 TIGRFAM TIGR00498 lexA: repressor LexA 2 201 2.5E-69 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 TVD_08600 801656e00a5885966c050f3362d97116 205 Pfam PF01726 LexA DNA binding domain 2 64 4.9E-22 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 SUPERFAMILY SSF46689 356 444 2.72E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 Pfam PF00072 Response regulator receiver domain 5 116 1.7E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 SUPERFAMILY SSF52172 1 188 1.57E-31 T 11-10-2018 IPR011006 CheY-like superfamily TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 SMART SM00382 163 315 3.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 Pfam PF02954 Bacterial regulatory protein, Fis family 404 442 1.0E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 Gene3D G3DSA:1.10.8.60 315 391 4.5E-22 T 11-10-2018 TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 SUPERFAMILY SSF52540 143 384 9.48E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 SMART SM00448 2 116 7.6E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 TIGRFAM TIGR02915 PEP_resp_reg: PEP-CTERM-box response regulator transcription factor 4 445 1.6E-216 T 11-10-2018 IPR014264 Signal transduction response regulator, PEP-CTERM system, putative TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 445 2.0E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 425 2.0E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 Pfam PF00158 Sigma-54 interaction domain 143 309 8.9E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 Gene3D G3DSA:1.10.10.60 395 445 4.7E-12 T 11-10-2018 TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 Gene3D G3DSA:3.40.50.2300 3 134 8.2E-24 T 11-10-2018 TVD_00255 248a62c62ab82cd26b0a72709ae375f9 445 Gene3D G3DSA:3.40.50.300 135 314 7.1E-68 T 11-10-2018 TVD_02925 450c71b7570bf463173aac4e98746abd 98 Pfam PF01527 Transposase 3 74 1.2E-12 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 TVD_02925 450c71b7570bf463173aac4e98746abd 98 Gene3D G3DSA:1.10.10.60 9 90 3.4E-5 T 11-10-2018 TVD_02925 450c71b7570bf463173aac4e98746abd 98 SUPERFAMILY SSF46689 4 96 1.27E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_03130 449b8ddc9fc5942f95fce8317d76eb5f 726 Pfam PF13328 HD domain 49 195 2.6E-50 T 11-10-2018 IPR003607 HD/PDEase domain TVD_03130 449b8ddc9fc5942f95fce8317d76eb5f 726 Pfam PF13291 ACT domain 648 723 6.1E-17 T 11-10-2018 IPR002912 ACT domain TVD_03130 449b8ddc9fc5942f95fce8317d76eb5f 726 Gene3D G3DSA:3.30.70.260 647 725 5.4E-14 T 11-10-2018 TVD_03130 449b8ddc9fc5942f95fce8317d76eb5f 726 Gene3D G3DSA:1.10.3210.10 19 209 9.6E-76 T 11-10-2018 TVD_03130 449b8ddc9fc5942f95fce8317d76eb5f 726 SMART SM00954 255 365 7.3E-63 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 TVD_03130 449b8ddc9fc5942f95fce8317d76eb5f 726 SUPERFAMILY SSF81301 201 412 9.97E-59 T 11-10-2018 TVD_03130 449b8ddc9fc5942f95fce8317d76eb5f 726 Gene3D G3DSA:3.10.20.30 401 474 4.2E-28 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TVD_03130 449b8ddc9fc5942f95fce8317d76eb5f 726 SMART SM00471 61 173 4.4E-10 T 11-10-2018 IPR003607 HD/PDEase domain TVD_03130 449b8ddc9fc5942f95fce8317d76eb5f 726 Gene3D G3DSA:3.30.460.10 215 345 5.6E-46 T 11-10-2018 TVD_03130 449b8ddc9fc5942f95fce8317d76eb5f 726 Pfam PF02824 TGS domain 408 467 4.7E-17 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 TVD_03130 449b8ddc9fc5942f95fce8317d76eb5f 726 Pfam PF04607 Region found in RelA / SpoT proteins 255 364 1.8E-36 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 TVD_03130 449b8ddc9fc5942f95fce8317d76eb5f 726 SUPERFAMILY SSF81271 395 468 2.62E-21 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TVD_03130 449b8ddc9fc5942f95fce8317d76eb5f 726 SUPERFAMILY SSF55021 649 723 1.01E-9 T 11-10-2018 TVD_03130 449b8ddc9fc5942f95fce8317d76eb5f 726 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 46 722 1.8E-233 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 TVD_03130 449b8ddc9fc5942f95fce8317d76eb5f 726 SUPERFAMILY SSF109604 26 208 8.95E-70 T 11-10-2018 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 Gene3D G3DSA:2.40.50.100 948 1022 4.5E-28 T 11-10-2018 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 SUPERFAMILY SSF64484 15 1361 0.0 T 11-10-2018 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 9.9E-8 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 8.1E-27 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 Gene3D G3DSA:1.10.150.390 1314 1374 1.1E-26 T 11-10-2018 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.6E-87 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 Gene3D G3DSA:1.10.274.100 490 640 4.7E-39 T 11-10-2018 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 Gene3D G3DSA:1.10.1790.20 1135 1312 2.6E-62 T 11-10-2018 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 Gene3D G3DSA:2.40.50.100 1023 1126 7.5E-29 T 11-10-2018 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 SMART SM00663 235 514 3.3E-181 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 Gene3D G3DSA:2.40.50.100 1151 1214 2.6E-62 T 11-10-2018 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 9.5E-28 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1372 19.062 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1040 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 Gene3D G3DSA:1.10.40.90 374 416 3.9E-21 T 11-10-2018 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 Gene3D G3DSA:1.10.132.30 641 790 4.2E-66 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1312 3.7E-76 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_02330 b80b45f0812fb6e538ab3796b7472f90 1406 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 2.3E-19 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.1E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.1E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.1E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.1E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 PIRSF PIRSF001535 1 570 1.1E-262 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 457 4.7E-53 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 SUPERFAMILY SSF55681 10 476 9.57E-105 T 11-10-2018 TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 SUPERFAMILY SSF52954 462 569 5.13E-30 T 11-10-2018 TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 Pfam PF03129 Anticodon binding domain 474 566 7.3E-19 T 11-10-2018 IPR004154 Anticodon-binding TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 Gene3D G3DSA:3.90.960.10 239 387 1.2E-236 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 Gene3D G3DSA:3.30.930.10 11 463 1.2E-236 T 11-10-2018 TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 563 6.2E-235 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 SUPERFAMILY SSF55826 253 387 6.67E-30 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 Pfam PF04073 Aminoacyl-tRNA editing domain 255 377 2.2E-27 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 Gene3D G3DSA:3.40.50.800 4 551 1.2E-236 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily TVD_10080 6c95f20d40dc6e0d3c51889859567005 570 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 569 42.489 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TVD_08335 4c785106002400c94476cacb008cecf9 261 SMART SM00849 19 206 2.1E-6 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_08335 4c785106002400c94476cacb008cecf9 261 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 83 104 3.1E-10 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 TVD_08335 4c785106002400c94476cacb008cecf9 261 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 198 211 3.1E-10 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 TVD_08335 4c785106002400c94476cacb008cecf9 261 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 51 69 3.1E-10 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 TVD_08335 4c785106002400c94476cacb008cecf9 261 Gene3D G3DSA:3.60.15.10 4 254 3.2E-35 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_08335 4c785106002400c94476cacb008cecf9 261 Pfam PF12706 Beta-lactamase superfamily domain 29 222 1.3E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_08335 4c785106002400c94476cacb008cecf9 261 SUPERFAMILY SSF56281 5 241 1.57E-35 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_07965 a2f14a270b2d450c2768e4d746561477 342 Gene3D G3DSA:3.30.930.10 7 340 2.9E-119 T 11-10-2018 TVD_07965 a2f14a270b2d450c2768e4d746561477 342 SUPERFAMILY SSF46589 15 99 3.35E-21 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 TVD_07965 a2f14a270b2d450c2768e4d746561477 342 SUPERFAMILY SSF55681 92 339 2.33E-78 T 11-10-2018 TVD_07965 a2f14a270b2d450c2768e4d746561477 342 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 338 3.2E-106 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TVD_07965 a2f14a270b2d450c2768e4d746561477 342 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 338 49.99 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 TVD_07965 a2f14a270b2d450c2768e4d746561477 342 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 87 4.7E-26 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 TVD_07965 a2f14a270b2d450c2768e4d746561477 342 Pfam PF01409 tRNA synthetases class II core domain (F) 92 338 6.5E-107 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 TVD_12940 25ce02239108a91b2063d9b5a8221cab 501 SUPERFAMILY SSF52091 402 483 4.12E-10 T 11-10-2018 IPR036513 STAS domain superfamily TVD_12940 25ce02239108a91b2063d9b5a8221cab 501 Gene3D G3DSA:3.30.750.24 394 491 1.1E-26 T 11-10-2018 IPR036513 STAS domain superfamily TVD_12940 25ce02239108a91b2063d9b5a8221cab 501 ProSitePatterns PS01130 SLC26A transporters signature. 49 70 - T 11-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 TVD_12940 25ce02239108a91b2063d9b5a8221cab 501 Pfam PF00916 Sulfate permease family 21 147 1.5E-25 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 TVD_12940 25ce02239108a91b2063d9b5a8221cab 501 Pfam PF00916 Sulfate permease family 154 364 1.9E-32 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 TVD_12940 25ce02239108a91b2063d9b5a8221cab 501 Pfam PF01740 STAS domain 405 480 8.3E-6 T 11-10-2018 IPR002645 STAS domain TVD_07390 42a903cb87cb35d5ceae266ff4d2b8a4 520 PIRSF PIRSF500061 11 520 5.4E-134 T 11-10-2018 TVD_07390 42a903cb87cb35d5ceae266ff4d2b8a4 520 SUPERFAMILY SSF51395 133 509 1.59E-100 T 11-10-2018 TVD_07390 42a903cb87cb35d5ceae266ff4d2b8a4 520 Gene3D G3DSA:3.20.20.70 169 519 2.9E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_07390 42a903cb87cb35d5ceae266ff4d2b8a4 520 Pfam PF01645 Conserved region in glutamate synthase 179 486 7.8E-89 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 TVD_07390 42a903cb87cb35d5ceae266ff4d2b8a4 520 Gene3D G3DSA:3.40.5.90 1 79 2.5E-29 T 11-10-2018 TVD_07390 42a903cb87cb35d5ceae266ff4d2b8a4 520 Pfam PF09360 Iron-binding zinc finger CDGSH type 57 76 1.4E-7 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 TVD_07390 42a903cb87cb35d5ceae266ff4d2b8a4 520 Pfam PF09360 Iron-binding zinc finger CDGSH type 14 40 2.7E-11 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 TVD_07390 42a903cb87cb35d5ceae266ff4d2b8a4 520 PIRSF PIRSF006429 14 520 2.2E-133 T 11-10-2018 IPR024188 Glutamate synthase large subunit-like protein TVD_07390 42a903cb87cb35d5ceae266ff4d2b8a4 520 SMART SM00704 11 46 2.1E-10 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 TVD_07390 42a903cb87cb35d5ceae266ff4d2b8a4 520 SMART SM00704 47 82 1.3E-4 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 TVD_12150 af89ea0f897fe3ae487c20053ed40bad 95 Gene3D G3DSA:1.10.20.60 1 93 1.2E-20 T 11-10-2018 TVD_12150 af89ea0f897fe3ae487c20053ed40bad 95 SUPERFAMILY SSF141000 2 93 3.79E-27 T 11-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 TVD_12150 af89ea0f897fe3ae487c20053ed40bad 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 6.2E-27 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 TVD_12150 af89ea0f897fe3ae487c20053ed40bad 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 22.25 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 TVD_12150 af89ea0f897fe3ae487c20053ed40bad 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 1.7E-15 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 TVD_08395 357ef53f938e4cc2d6a363f0360acde1 502 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 43 496 3.6E-85 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 TVD_08395 357ef53f938e4cc2d6a363f0360acde1 502 Pfam PF00939 Sodium:sulfate symporter transmembrane region 31 500 1.0E-73 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 TVD_08395 357ef53f938e4cc2d6a363f0360acde1 502 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 447 463 - T 11-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 TVD_01930 197eb994b3071822a723897a6c1c72e4 272 SUPERFAMILY SSF52540 5 234 1.33E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01930 197eb994b3071822a723897a6c1c72e4 272 Pfam PF00005 ABC transporter 23 170 6.1E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_01930 197eb994b3071822a723897a6c1c72e4 272 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_01930 197eb994b3071822a723897a6c1c72e4 272 SMART SM00382 31 220 1.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_01930 197eb994b3071822a723897a6c1c72e4 272 Gene3D G3DSA:3.40.50.300 6 249 3.0E-68 T 11-10-2018 TVD_11415 87122be3ba31461850f7579a03b1d3fa 236 Pfam PF00929 Exonuclease 4 168 4.4E-35 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TVD_11415 87122be3ba31461850f7579a03b1d3fa 236 SUPERFAMILY SSF53098 1 177 1.63E-53 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_11415 87122be3ba31461850f7579a03b1d3fa 236 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 233 1.9E-88 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_11415 87122be3ba31461850f7579a03b1d3fa 236 Gene3D G3DSA:3.30.420.10 1 181 3.9E-55 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TVD_11415 87122be3ba31461850f7579a03b1d3fa 236 SMART SM00479 2 177 7.3E-47 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TVD_11415 87122be3ba31461850f7579a03b1d3fa 236 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 179 1.8E-61 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 355 370 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site TVD_05060 93d333015534695dc6c155b52ebeb21d 696 PIRSF PIRSF001604 9 696 7.6E-242 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 SUPERFAMILY SSF50249 342 423 4.8E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_05060 93d333015534695dc6c155b52ebeb21d 696 Pfam PF12826 Helix-hairpin-helix motif 534 597 1.5E-24 T 11-10-2018 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 Gene3D G3DSA:2.20.70.80 417 455 5.6E-18 T 11-10-2018 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 Gene3D G3DSA:3.30.470.90 82 341 1.2E-95 T 11-10-2018 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 136 165 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site TVD_05060 93d333015534695dc6c155b52ebeb21d 696 Gene3D G3DSA:1.10.287.610 15 81 1.2E-31 T 11-10-2018 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 SUPERFAMILY SSF52113 621 695 1.45E-17 T 11-10-2018 IPR036420 BRCT domain superfamily TVD_05060 93d333015534695dc6c155b52ebeb21d 696 Hamap MF_01588 DNA ligase [ligA]. 15 695 52.795 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 432 458 1.3E-10 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 622 694 2.3E-13 T 11-10-2018 IPR001357 BRCT domain TVD_05060 93d333015534695dc6c155b52ebeb21d 696 SMART SM00532 16 472 4.4E-257 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 24 687 1.6E-247 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 SUPERFAMILY SSF56091 16 340 5.4E-117 T 11-10-2018 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 Gene3D G3DSA:1.10.150.20 456 529 2.0E-28 T 11-10-2018 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 Gene3D G3DSA:2.40.50.140 342 413 4.1E-33 T 11-10-2018 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 SMART SM00292 621 695 4.0E-9 T 11-10-2018 IPR001357 BRCT domain TVD_05060 93d333015534695dc6c155b52ebeb21d 696 Gene3D G3DSA:3.40.50.10190 609 696 5.6E-24 T 11-10-2018 IPR036420 BRCT domain superfamily TVD_05060 93d333015534695dc6c155b52ebeb21d 696 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 18 342 2.5E-122 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 Pfam PF14520 Helix-hairpin-helix domain 470 525 2.7E-7 T 11-10-2018 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 345 421 2.8E-33 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 SMART SM00278 536 555 56.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 SMART SM00278 470 489 4.3 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 SMART SM00278 504 523 0.29 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 SMART SM00278 568 587 2.6 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 Gene3D G3DSA:1.10.150.20 530 608 7.6E-32 T 11-10-2018 TVD_05060 93d333015534695dc6c155b52ebeb21d 696 SUPERFAMILY SSF47781 428 607 5.56E-65 T 11-10-2018 IPR010994 RuvA domain 2-like TVD_12620 2bc14a41af6c833e40a1e23cddb74486 695 Gene3D G3DSA:1.10.287.950 337 664 4.9E-64 T 11-10-2018 TVD_12620 2bc14a41af6c833e40a1e23cddb74486 695 SUPERFAMILY SSF58104 362 663 2.62E-68 T 11-10-2018 TVD_12620 2bc14a41af6c833e40a1e23cddb74486 695 SMART SM00283 401 662 2.9E-80 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_12620 2bc14a41af6c833e40a1e23cddb74486 695 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 35 131 7.9E-15 T 11-10-2018 IPR029095 NarX-like, N-terminal TVD_12620 2bc14a41af6c833e40a1e23cddb74486 695 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 475 630 4.6E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_03645 5f71da112b3b9a10109995899dc5a1ef 504 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 72 122 3.9E-5 T 11-10-2018 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03645 5f71da112b3b9a10109995899dc5a1ef 504 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 8 498 8.4E-182 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03645 5f71da112b3b9a10109995899dc5a1ef 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 2.1E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03645 5f71da112b3b9a10109995899dc5a1ef 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 138 157 2.1E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03645 5f71da112b3b9a10109995899dc5a1ef 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 2.1E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03645 5f71da112b3b9a10109995899dc5a1ef 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 168 192 2.1E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03645 5f71da112b3b9a10109995899dc5a1ef 504 Pfam PF00361 Proton-conducting membrane transporter 132 428 6.9E-75 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_01890 2028a6b08a815ede66461f304525ed6e 179 Gene3D G3DSA:2.60.450.10 40 179 1.4E-34 T 11-10-2018 TVD_01890 2028a6b08a815ede66461f304525ed6e 179 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 17 176 21.406 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 TVD_01890 2028a6b08a815ede66461f304525ed6e 179 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 41 175 1.8E-32 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 TVD_01890 2028a6b08a815ede66461f304525ed6e 179 Pfam PF03968 OstA-like protein 45 155 3.7E-21 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 Gene3D G3DSA:3.30.70.1430 38 815 0.0 T 11-10-2018 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 SUPERFAMILY SSF82714 183 272 6.02E-19 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 SUPERFAMILY SSF82693 563 669 8.89E-24 T 11-10-2018 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 Gene3D G3DSA:1.20.1640.10 8 510 0.0 T 11-10-2018 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 Pfam PF00873 AcrB/AcrD/AcrF family 1 1024 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 Gene3D G3DSA:3.30.70.1320 133 333 0.0 T 11-10-2018 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 SUPERFAMILY SSF82866 803 1025 9.02E-44 T 11-10-2018 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 Gene3D G3DSA:1.20.1640.10 511 1021 0.0 T 11-10-2018 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 SUPERFAMILY SSF82693 39 129 1.26E-21 T 11-10-2018 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 Gene3D G3DSA:3.30.70.1440 667 864 0.0 T 11-10-2018 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 SUPERFAMILY SSF82714 720 805 3.4E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 Gene3D G3DSA:3.30.2090.10 179 276 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 Gene3D G3DSA:3.30.2090.10 719 807 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 5.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 5.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 5.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 5.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 5.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 5.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 5.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 5.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 5.0E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 Gene3D G3DSA:3.30.70.1430 565 666 0.0 T 11-10-2018 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 SUPERFAMILY SSF82866 297 497 5.49E-49 T 11-10-2018 TVD_09235 15ffe05a720811284060fb55f28ff6dc 1048 SUPERFAMILY SSF82693 136 331 1.74E-24 T 11-10-2018 TVD_07630 5e3c109714d02606f723e2a3abd1e1e7 525 Gene3D G3DSA:3.60.110.10 235 484 3.6E-19 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TVD_07630 5e3c109714d02606f723e2a3abd1e1e7 525 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 7 501 14.996 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TVD_07630 5e3c109714d02606f723e2a3abd1e1e7 525 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 74 461 2.2E-65 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TVD_07630 5e3c109714d02606f723e2a3abd1e1e7 525 Pfam PF00795 Carbon-nitrogen hydrolase 265 475 6.3E-22 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TVD_07630 5e3c109714d02606f723e2a3abd1e1e7 525 SUPERFAMILY SSF56317 225 465 2.35E-37 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TVD_04365 97c4200e079ddf5c8ceb0c7a5bc3c0c5 593 Pfam PF00664 ABC transporter transmembrane region 33 303 2.4E-55 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TVD_04365 97c4200e079ddf5c8ceb0c7a5bc3c0c5 593 Pfam PF00005 ABC transporter 365 514 2.1E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_04365 97c4200e079ddf5c8ceb0c7a5bc3c0c5 593 Gene3D G3DSA:3.40.50.300 339 590 5.0E-94 T 11-10-2018 TVD_04365 97c4200e079ddf5c8ceb0c7a5bc3c0c5 593 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_04365 97c4200e079ddf5c8ceb0c7a5bc3c0c5 593 SUPERFAMILY SSF90123 19 335 1.15E-76 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TVD_04365 97c4200e079ddf5c8ceb0c7a5bc3c0c5 593 SUPERFAMILY SSF52540 337 585 7.56E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04365 97c4200e079ddf5c8ceb0c7a5bc3c0c5 593 Gene3D G3DSA:1.20.1560.10 3 336 1.2E-83 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TVD_04365 97c4200e079ddf5c8ceb0c7a5bc3c0c5 593 SMART SM00382 374 560 3.8E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_04365 97c4200e079ddf5c8ceb0c7a5bc3c0c5 593 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 18 587 4.1E-236 T 11-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 TVD_05960 4980ab335ede15f11f85a52078edb286 198 Gene3D G3DSA:3.90.190.10 9 186 2.9E-41 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like TVD_05960 4980ab335ede15f11f85a52078edb286 198 SMART SM00404 86 182 2.5E-4 T 11-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic TVD_05960 4980ab335ede15f11f85a52078edb286 198 SUPERFAMILY SSF52799 38 179 7.35E-37 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like TVD_05960 4980ab335ede15f11f85a52078edb286 198 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 44 146 2.0E-11 T 11-10-2018 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_12115 8d16542db0094391d464b997d9b1c987 284 Gene3D G3DSA:3.40.50.150 91 284 6.7E-54 T 11-10-2018 TVD_12115 8d16542db0094391d464b997d9b1c987 284 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 279 2.3E-81 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 TVD_12115 8d16542db0094391d464b997d9b1c987 284 Pfam PF13847 Methyltransferase domain 118 249 1.2E-15 T 11-10-2018 IPR025714 Methyltransferase domain TVD_12115 8d16542db0094391d464b997d9b1c987 284 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 284 38.633 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 TVD_12115 8d16542db0094391d464b997d9b1c987 284 Gene3D G3DSA:1.10.8.10 6 90 5.2E-19 T 11-10-2018 TVD_12115 8d16542db0094391d464b997d9b1c987 284 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 283 1.2E-62 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 TVD_12115 8d16542db0094391d464b997d9b1c987 284 SUPERFAMILY SSF53335 19 270 1.39E-54 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_10070 f6fc68adac2f62b457a793577ef2a9c2 346 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 263 6.2E-21 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TVD_10070 f6fc68adac2f62b457a793577ef2a9c2 346 Gene3D G3DSA:2.40.50.100 51 191 1.0E-65 T 11-10-2018 TVD_10070 f6fc68adac2f62b457a793577ef2a9c2 346 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 28 333 5.9E-66 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TVD_10070 f6fc68adac2f62b457a793577ef2a9c2 346 Gene3D G3DSA:2.40.420.20 28 327 1.0E-65 T 11-10-2018 TVD_10070 f6fc68adac2f62b457a793577ef2a9c2 346 Gene3D G3DSA:2.40.30.170 39 269 1.0E-65 T 11-10-2018 TVD_10070 f6fc68adac2f62b457a793577ef2a9c2 346 Gene3D G3DSA:1.10.287.470 85 156 1.0E-65 T 11-10-2018 TVD_10070 f6fc68adac2f62b457a793577ef2a9c2 346 SUPERFAMILY SSF111369 42 265 8.5E-28 T 11-10-2018 TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 SMART SM00382 196 341 1.9E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 SMART SM00382 595 753 3.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 SMART SM01086 764 853 8.9E-38 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 92 143 3.5E-10 T 11-10-2018 IPR004176 Clp, N-terminal TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 15 66 4.4E-16 T 11-10-2018 IPR004176 Clp, N-terminal TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 292 304 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 Gene3D G3DSA:3.40.50.300 146 340 2.3E-75 T 11-10-2018 TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 764 844 9.2E-26 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 SUPERFAMILY SSF81923 2 154 8.73E-43 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 Gene3D G3DSA:3.40.50.300 341 542 1.5E-70 T 11-10-2018 TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 Gene3D G3DSA:1.10.1780.10 1 145 1.2E-34 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 334 1.6E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 Gene3D G3DSA:3.40.50.300 548 762 1.2E-87 T 11-10-2018 TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 4 853 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 Pfam PF07724 AAA domain (Cdc48 subfamily) 594 757 3.6E-56 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 SUPERFAMILY SSF52540 544 847 6.32E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 SUPERFAMILY SSF52540 157 543 6.35E-101 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 629 647 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 Gene3D G3DSA:1.10.8.60 764 858 1.3E-27 T 11-10-2018 TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 9.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 720 9.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 644 662 9.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TVD_11300 c4efa5d188074f5658a97a4c9317c7b2 860 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 617 9.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TVD_12395 89a0c1c51012575d95ea0411a0e4e44b 332 SUPERFAMILY SSF56112 6 320 1.9E-47 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily TVD_12395 89a0c1c51012575d95ea0411a0e4e44b 332 Gene3D G3DSA:3.30.200.20 4 93 2.3E-23 T 11-10-2018 TVD_12395 89a0c1c51012575d95ea0411a0e4e44b 332 Gene3D G3DSA:3.90.1200.10 94 332 2.8E-69 T 11-10-2018 TVD_12395 89a0c1c51012575d95ea0411a0e4e44b 332 Pfam PF01636 Phosphotransferase enzyme family 28 254 1.9E-27 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase TVD_01870 2616ba0f98e10e49dc4057730a6b6e7d 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 144 9.5E-34 T 11-10-2018 IPR002178 PTS EIIA type-2 domain TVD_01870 2616ba0f98e10e49dc4057730a6b6e7d 155 SUPERFAMILY SSF55804 1 148 4.06E-35 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TVD_01870 2616ba0f98e10e49dc4057730a6b6e7d 155 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 54 70 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain TVD_01870 2616ba0f98e10e49dc4057730a6b6e7d 155 Gene3D G3DSA:3.40.930.10 1 150 5.6E-42 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 TVD_04270 4516d2bcf450babee32441224059c72c 328 Pfam PF00586 AIR synthase related protein, N-terminal domain 33 142 3.3E-25 T 11-10-2018 IPR016188 PurM-like, N-terminal domain TVD_04270 4516d2bcf450babee32441224059c72c 328 Gene3D G3DSA:3.30.1330.10 4 148 1.1E-47 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TVD_04270 4516d2bcf450babee32441224059c72c 328 PIRSF PIRSF005303 2 324 4.4E-82 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 TVD_04270 4516d2bcf450babee32441224059c72c 328 SUPERFAMILY SSF55326 3 142 1.44E-35 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TVD_04270 4516d2bcf450babee32441224059c72c 328 SUPERFAMILY SSF56042 147 309 6.88E-34 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TVD_04270 4516d2bcf450babee32441224059c72c 328 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 5 324 27.302 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 TVD_04270 4516d2bcf450babee32441224059c72c 328 Pfam PF02769 AIR synthase related protein, C-terminal domain 154 306 7.7E-11 T 11-10-2018 IPR010918 PurM-like, C-terminal domain TVD_04270 4516d2bcf450babee32441224059c72c 328 Gene3D G3DSA:3.90.650.10 150 325 8.4E-48 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TVD_04270 4516d2bcf450babee32441224059c72c 328 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 7 324 1.3E-92 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 TVD_08090 ed676f816d1b6b9cfc86fa239884c1e0 284 Pfam PF00005 ABC transporter 22 160 5.7E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_08090 ed676f816d1b6b9cfc86fa239884c1e0 284 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_08090 ed676f816d1b6b9cfc86fa239884c1e0 284 Gene3D G3DSA:3.40.50.300 3 283 3.7E-66 T 11-10-2018 TVD_08090 ed676f816d1b6b9cfc86fa239884c1e0 284 SUPERFAMILY SSF52540 5 236 1.21E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_08090 ed676f816d1b6b9cfc86fa239884c1e0 284 SMART SM00382 31 211 2.2E-21 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 Gene3D G3DSA:3.30.565.10 10 226 1.9E-93 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 738 798 1.2E-29 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 39 180 3.5E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 9 809 101.842 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 SUPERFAMILY SSF55874 12 224 1.18E-72 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 SUPERFAMILY SSF54211 227 397 5.88E-60 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 12 809 0.0 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 Gene3D G3DSA:3.40.50.670 709 808 1.6E-25 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 Pfam PF01751 Toprim domain 425 537 3.4E-17 T 11-10-2018 IPR006171 TOPRIM domain TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR01159 DNA gyrase subunit B signature 226 248 7.9E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR01159 DNA gyrase subunit B signature 762 774 7.9E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR01159 DNA gyrase subunit B signature 476 485 7.9E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR01159 DNA gyrase subunit B signature 202 215 7.9E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR01159 DNA gyrase subunit B signature 318 334 7.9E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR01159 DNA gyrase subunit B signature 366 380 7.9E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR01159 DNA gyrase subunit B signature 778 794 7.9E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR01159 DNA gyrase subunit B signature 12 22 7.9E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR01159 DNA gyrase subunit B signature 187 202 7.9E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR01159 DNA gyrase subunit B signature 380 400 7.9E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 SUPERFAMILY SSF56719 400 799 1.12E-86 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 ProSitePatterns PS00177 DNA topoisomerase II signature. 428 436 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 SMART SM00433 42 802 1.3E-271 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR00418 DNA topoisomerase II family signature 426 440 6.6E-70 T 11-10-2018 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR00418 DNA topoisomerase II family signature 531 543 6.6E-70 T 11-10-2018 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR00418 DNA topoisomerase II family signature 511 528 6.6E-70 T 11-10-2018 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR00418 DNA topoisomerase II family signature 42 57 6.6E-70 T 11-10-2018 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR00418 DNA topoisomerase II family signature 274 287 6.6E-70 T 11-10-2018 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR00418 DNA topoisomerase II family signature 493 509 6.6E-70 T 11-10-2018 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR00418 DNA topoisomerase II family signature 741 757 6.6E-70 T 11-10-2018 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR00418 DNA topoisomerase II family signature 77 90 6.6E-70 T 11-10-2018 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 PRINTS PR00418 DNA topoisomerase II family signature 120 134 6.6E-70 T 11-10-2018 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 Pfam PF00204 DNA gyrase B 227 396 4.3E-60 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 Gene3D G3DSA:3.30.230.10 227 398 6.1E-72 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 Gene3D G3DSA:3.40.50.670 404 572 7.2E-74 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TVD_13480 20bbd89911bb3c4651e7deed7060dff5 809 SMART SM00387 38 182 4.5E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 SMART SM00831 18 91 5.7E-35 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 Pfam PF00702 haloacid dehalogenase-like hydrolase 336 659 5.8E-20 T 11-10-2018 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 341 347 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 Gene3D G3DSA:3.40.50.1000 336 690 4.7E-290 T 11-10-2018 IPR023214 HAD superfamily TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 Gene3D G3DSA:1.20.1110.10 69 901 4.7E-290 T 11-10-2018 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 544 555 5.9E-39 T 11-10-2018 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 176 190 5.9E-39 T 11-10-2018 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 645 664 5.9E-39 T 11-10-2018 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 339 353 5.9E-39 T 11-10-2018 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 669 681 5.9E-39 T 11-10-2018 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 566 576 5.9E-39 T 11-10-2018 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 SUPERFAMILY SSF81660 346 548 7.85E-50 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 SUPERFAMILY SSF81653 128 237 1.29E-28 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 Pfam PF00122 E1-E2 ATPase 126 318 8.6E-51 T 11-10-2018 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 Gene3D G3DSA:2.70.150.10 34 241 4.7E-290 T 11-10-2018 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 Gene3D G3DSA:3.40.1110.10 349 551 4.7E-290 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 Pfam PF00690 Cation transporter/ATPase, N-terminus 19 84 4.5E-18 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 Pfam PF00689 Cation transporting ATPase, C-terminus 730 903 1.9E-44 T 11-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 611 735 4.0E-35 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 97 360 1.7E-40 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 677 702 2.9E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 645 661 2.9E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 617 633 2.9E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 501 519 2.9E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 SUPERFAMILY SSF56784 337 750 4.96E-59 T 11-10-2018 IPR036412 HAD-like superfamily TVD_03095 4fe3edb5366e6f471359dfcc61e2fb7a 919 SUPERFAMILY SSF81665 19 907 3.53E-125 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TVD_06620 4caeca719c77bfbf08e9a22ababb1541 584 Gene3D G3DSA:3.30.2320.10 444 578 1.6E-14 T 11-10-2018 TVD_06620 4caeca719c77bfbf08e9a22ababb1541 584 SUPERFAMILY SSF56563 309 582 1.28E-40 T 11-10-2018 TVD_06620 4caeca719c77bfbf08e9a22ababb1541 584 Gene3D G3DSA:3.30.2400.10 372 573 1.6E-14 T 11-10-2018 TVD_06620 4caeca719c77bfbf08e9a22ababb1541 584 Pfam PF04586 Caudovirus prohead serine protease 35 128 1.2E-5 T 11-10-2018 IPR006433 Prohead protease TVD_06620 4caeca719c77bfbf08e9a22ababb1541 584 Pfam PF05065 Phage capsid family 324 582 1.6E-35 T 11-10-2018 IPR024455 Phage capsid TVD_06620 4caeca719c77bfbf08e9a22ababb1541 584 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 297 582 3.1E-29 T 11-10-2018 IPR024455 Phage capsid TVD_10985 7a214e1e2936b08f1a9fd30e452213b4 304 TIGRFAM TIGR00444 mazG: MazG family protein 37 287 1.1E-84 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG TVD_10985 7a214e1e2936b08f1a9fd30e452213b4 304 Gene3D G3DSA:1.10.287.1080 161 293 8.1E-43 T 11-10-2018 TVD_10985 7a214e1e2936b08f1a9fd30e452213b4 304 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 54 132 8.1E-24 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core TVD_10985 7a214e1e2936b08f1a9fd30e452213b4 304 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 198 260 4.7E-9 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core TVD_10985 7a214e1e2936b08f1a9fd30e452213b4 304 SUPERFAMILY SSF101386 168 266 3.74E-25 T 11-10-2018 TVD_10985 7a214e1e2936b08f1a9fd30e452213b4 304 Gene3D G3DSA:1.10.287.1080 29 157 6.2E-43 T 11-10-2018 TVD_10985 7a214e1e2936b08f1a9fd30e452213b4 304 SUPERFAMILY SSF101386 30 136 2.43E-22 T 11-10-2018 TVD_07220 74f77d6f2b4290ca1a41a2e0e4b96b39 388 Gene3D G3DSA:3.40.50.2000 168 355 1.8E-5 T 11-10-2018 TVD_07220 74f77d6f2b4290ca1a41a2e0e4b96b39 388 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 5 368 2.9E-85 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 TVD_07220 74f77d6f2b4290ca1a41a2e0e4b96b39 388 Pfam PF02684 Lipid-A-disaccharide synthetase 6 344 5.6E-90 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 TVD_07220 74f77d6f2b4290ca1a41a2e0e4b96b39 388 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 2 376 32.663 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 TVD_07220 74f77d6f2b4290ca1a41a2e0e4b96b39 388 SUPERFAMILY SSF53756 6 376 5.58E-33 T 11-10-2018 TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 2.4E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 270 288 2.4E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 Gene3D G3DSA:3.40.50.300 196 369 8.5E-47 T 11-10-2018 TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 Hamap MF_00195 GTPase Der [der]. 2 456 37.205 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 Gene3D G3DSA:3.30.300.20 373 456 1.4E-23 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 SUPERFAMILY SSF52540 1 162 7.11E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 373 453 3.3E-28 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 198 329 1.1E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 159 9.1E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 Gene3D G3DSA:3.40.50.300 4 167 2.3E-40 T 11-10-2018 TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 Pfam PF01926 50S ribosome-binding GTPase 199 317 8.6E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.6E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 SMART SM00382 1 177 5.1 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 SMART SM00382 196 339 7.2E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 PIRSF PIRSF006485 1 461 2.5E-166 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 453 1.0E-167 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 TVD_04945 48a782f3d3c84298bf53d65f651d2cb0 483 SUPERFAMILY SSF52540 181 459 2.7E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_07245 e7189a48330a84c434c0eb394fe9c94c 769 Gene3D G3DSA:3.10.20.310 14 85 2.0E-17 T 11-10-2018 TVD_07245 e7189a48330a84c434c0eb394fe9c94c 769 Pfam PF01103 Surface antigen 442 769 2.3E-68 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 TVD_07245 e7189a48330a84c434c0eb394fe9c94c 769 Gene3D G3DSA:3.10.20.310 342 418 2.2E-19 T 11-10-2018 TVD_07245 e7189a48330a84c434c0eb394fe9c94c 769 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 19 769 6.6E-249 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TVD_07245 e7189a48330a84c434c0eb394fe9c94c 769 Gene3D G3DSA:2.40.160.50 419 769 1.7E-103 T 11-10-2018 TVD_07245 e7189a48330a84c434c0eb394fe9c94c 769 Gene3D G3DSA:3.10.20.310 262 337 2.2E-15 T 11-10-2018 TVD_07245 e7189a48330a84c434c0eb394fe9c94c 769 PIRSF PIRSF006076 3 769 1.7E-234 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TVD_07245 e7189a48330a84c434c0eb394fe9c94c 769 Gene3D G3DSA:3.10.20.310 86 166 1.1E-19 T 11-10-2018 TVD_07245 e7189a48330a84c434c0eb394fe9c94c 769 Gene3D G3DSA:3.10.20.310 169 260 1.1E-19 T 11-10-2018 TVD_07245 e7189a48330a84c434c0eb394fe9c94c 769 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 769 23.756 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TVD_07245 e7189a48330a84c434c0eb394fe9c94c 769 Pfam PF07244 Surface antigen variable number repeat 18 82 9.0E-5 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TVD_07245 e7189a48330a84c434c0eb394fe9c94c 769 Pfam PF07244 Surface antigen variable number repeat 170 257 1.2E-12 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TVD_07245 e7189a48330a84c434c0eb394fe9c94c 769 Pfam PF07244 Surface antigen variable number repeat 341 415 3.2E-9 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TVD_07245 e7189a48330a84c434c0eb394fe9c94c 769 Pfam PF07244 Surface antigen variable number repeat 260 338 3.6E-8 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TVD_07245 e7189a48330a84c434c0eb394fe9c94c 769 Pfam PF07244 Surface antigen variable number repeat 87 166 3.7E-14 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TVD_00770 572485a296798102431eeb70872667df 431 Gene3D G3DSA:2.40.160.10 59 384 5.9E-8 T 11-10-2018 IPR023614 Porin domain superfamily TVD_00770 572485a296798102431eeb70872667df 431 SUPERFAMILY SSF56935 83 417 5.8E-12 T 11-10-2018 TVD_00405 4e32174c31027d9b0c4ba2c7395a9413 339 Gene3D G3DSA:3.90.550.10 2 268 2.2E-68 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_00405 4e32174c31027d9b0c4ba2c7395a9413 339 Pfam PF00535 Glycosyl transferase family 2 27 129 1.5E-33 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TVD_00405 4e32174c31027d9b0c4ba2c7395a9413 339 SUPERFAMILY SSF53448 24 252 2.38E-62 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_05630 28a61264dc0482ee24c3cc636a5be1bd 109 Pfam PF02699 Preprotein translocase subunit 24 98 3.8E-29 T 11-10-2018 IPR003849 Preprotein translocase YajC TVD_05630 28a61264dc0482ee24c3cc636a5be1bd 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 3.3E-16 T 11-10-2018 IPR003849 Preprotein translocase YajC TVD_05630 28a61264dc0482ee24c3cc636a5be1bd 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 3.3E-16 T 11-10-2018 IPR003849 Preprotein translocase YajC TVD_05630 28a61264dc0482ee24c3cc636a5be1bd 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 22 101 1.1E-28 T 11-10-2018 IPR003849 Preprotein translocase YajC TVD_05630 28a61264dc0482ee24c3cc636a5be1bd 109 SMART SM01323 19 101 4.0E-42 T 11-10-2018 IPR003849 Preprotein translocase YajC TVD_07290 1127819752ac21af5b3a55ff78afe52b 261 Pfam PF00557 Metallopeptidase family M24 12 241 3.2E-52 T 11-10-2018 IPR000994 Peptidase M24 TVD_07290 1127819752ac21af5b3a55ff78afe52b 261 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TVD_07290 1127819752ac21af5b3a55ff78afe52b 261 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 249 3.8E-99 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TVD_07290 1127819752ac21af5b3a55ff78afe52b 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 1.1E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TVD_07290 1127819752ac21af5b3a55ff78afe52b 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 1.1E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TVD_07290 1127819752ac21af5b3a55ff78afe52b 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 1.1E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TVD_07290 1127819752ac21af5b3a55ff78afe52b 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 1.1E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 TVD_07290 1127819752ac21af5b3a55ff78afe52b 261 Gene3D G3DSA:3.90.230.10 1 259 4.9E-115 T 11-10-2018 TVD_07290 1127819752ac21af5b3a55ff78afe52b 261 Hamap MF_01974 Methionine aminopeptidase [map]. 3 250 41.886 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 TVD_07290 1127819752ac21af5b3a55ff78afe52b 261 SUPERFAMILY SSF55920 4 253 4.71E-92 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like TVD_00210 92d1adc838c9202237abea8ff76390d9 137 PRINTS PR00502 NUDIX hydrolase family signature 39 53 4.6E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TVD_00210 92d1adc838c9202237abea8ff76390d9 137 PRINTS PR00502 NUDIX hydrolase family signature 53 68 4.6E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TVD_00210 92d1adc838c9202237abea8ff76390d9 137 Pfam PF00293 NUDIX domain 11 129 2.7E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TVD_00210 92d1adc838c9202237abea8ff76390d9 137 SUPERFAMILY SSF55811 11 131 2.84E-27 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TVD_00210 92d1adc838c9202237abea8ff76390d9 137 Gene3D G3DSA:3.90.79.10 4 134 2.2E-28 T 11-10-2018 TVD_11825 9cedb398276e0f5463330961e0cb681c 139 Pfam PF02915 Rubrerythrin 10 133 8.9E-29 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 TVD_11825 9cedb398276e0f5463330961e0cb681c 139 SUPERFAMILY SSF47240 3 138 3.74E-42 T 11-10-2018 IPR009078 Ferritin-like superfamily TVD_11825 9cedb398276e0f5463330961e0cb681c 139 Gene3D G3DSA:1.20.1260.10 1 139 2.2E-53 T 11-10-2018 IPR012347 Ferritin-like TVD_09125 7a8c599efb4ca0c5a96a27b534c0a049 245 SUPERFAMILY SSF143422 3 127 4.45E-20 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TVD_09125 7a8c599efb4ca0c5a96a27b534c0a049 245 Gene3D G3DSA:3.30.70.1290 1 158 3.9E-29 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TVD_09125 7a8c599efb4ca0c5a96a27b534c0a049 245 Pfam PF01797 Transposase IS200 like 14 122 1.2E-8 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 TVD_09125 7a8c599efb4ca0c5a96a27b534c0a049 245 SMART SM01321 9 124 4.3E-23 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 TVD_08720 ef71c3cdf3d00b543ecc729a4b736741 357 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 54 323 3.9E-55 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 TVD_08720 ef71c3cdf3d00b543ecc729a4b736741 357 PIRSF PIRSF039012 10 329 1.2E-82 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 TVD_08720 ef71c3cdf3d00b543ecc729a4b736741 357 SUPERFAMILY SSF53187 28 323 3.31E-69 T 11-10-2018 TVD_08720 ef71c3cdf3d00b543ecc729a4b736741 357 Gene3D G3DSA:3.40.630.10 24 325 8.3E-86 T 11-10-2018 TVD_04235 8b7676af642f6027886067ebb1b46cf8 419 SUPERFAMILY SSF53383 5 416 1.63E-183 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_04235 8b7676af642f6027886067ebb1b46cf8 419 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.581 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TVD_04235 8b7676af642f6027886067ebb1b46cf8 419 Gene3D G3DSA:3.40.640.10 37 288 3.7E-186 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_04235 8b7676af642f6027886067ebb1b46cf8 419 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TVD_04235 8b7676af642f6027886067ebb1b46cf8 419 Pfam PF00464 Serine hydroxymethyltransferase 10 385 1.7E-180 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TVD_04235 8b7676af642f6027886067ebb1b46cf8 419 Gene3D G3DSA:3.90.1150.10 11 396 3.7E-186 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_04235 8b7676af642f6027886067ebb1b46cf8 419 PIRSF PIRSF000412 3 419 2.2E-169 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 TVD_04825 0f3da475d24c905a05209e342a92afc1 468 Gene3D G3DSA:1.10.579.10 294 468 1.2E-71 T 11-10-2018 TVD_04825 0f3da475d24c905a05209e342a92afc1 468 SUPERFAMILY SSF52425 6 209 4.84E-59 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 TVD_04825 0f3da475d24c905a05209e342a92afc1 468 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 344 363 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal TVD_04825 0f3da475d24c905a05209e342a92afc1 468 PRINTS PR00147 DNA photolyase signature 143 159 1.1E-22 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 TVD_04825 0f3da475d24c905a05209e342a92afc1 468 PRINTS PR00147 DNA photolyase signature 344 362 1.1E-22 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 TVD_04825 0f3da475d24c905a05209e342a92afc1 468 PRINTS PR00147 DNA photolyase signature 383 397 1.1E-22 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 TVD_04825 0f3da475d24c905a05209e342a92afc1 468 PRINTS PR00147 DNA photolyase signature 324 340 1.1E-22 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 TVD_04825 0f3da475d24c905a05209e342a92afc1 468 Pfam PF00875 DNA photolyase 7 171 7.1E-52 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 TVD_04825 0f3da475d24c905a05209e342a92afc1 468 Pfam PF03441 FAD binding domain of DNA photolyase 275 463 7.5E-80 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 TVD_04825 0f3da475d24c905a05209e342a92afc1 468 SUPERFAMILY SSF48173 194 467 2.09E-107 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 TVD_04825 0f3da475d24c905a05209e342a92afc1 468 Gene3D G3DSA:3.40.50.620 8 207 1.6E-98 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_04825 0f3da475d24c905a05209e342a92afc1 468 Gene3D G3DSA:1.25.40.80 132 289 1.6E-98 T 11-10-2018 TVD_10935 0fcedae9f8ee82174a68da0648d5084e 256 SUPERFAMILY SSF51306 58 245 3.09E-66 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TVD_10935 0fcedae9f8ee82174a68da0648d5084e 256 Pfam PF00717 Peptidase S24-like 66 147 4.6E-22 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TVD_10935 0fcedae9f8ee82174a68da0648d5084e 256 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 46 238 2.1E-50 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TVD_10935 0fcedae9f8ee82174a68da0648d5084e 256 Gene3D G3DSA:2.170.230.10 135 198 2.7E-66 T 11-10-2018 TVD_10935 0fcedae9f8ee82174a68da0648d5084e 256 ProSitePatterns PS00761 Signal peptidases I signature 3. 204 217 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 TVD_10935 0fcedae9f8ee82174a68da0648d5084e 256 Gene3D G3DSA:2.10.109.10 58 239 2.7E-66 T 11-10-2018 TVD_10935 0fcedae9f8ee82174a68da0648d5084e 256 ProSitePatterns PS00760 Signal peptidases I lysine active site. 126 138 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 TVD_10935 0fcedae9f8ee82174a68da0648d5084e 256 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 124 136 2.0E-25 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TVD_10935 0fcedae9f8ee82174a68da0648d5084e 256 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 60 76 2.0E-25 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TVD_10935 0fcedae9f8ee82174a68da0648d5084e 256 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 199 218 2.0E-25 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TVD_10935 0fcedae9f8ee82174a68da0648d5084e 256 ProSitePatterns PS00501 Signal peptidases I serine active site. 69 76 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 TVD_02490 14754fa018ff4005b6b5fd37d5f11f4d 950 Gene3D G3DSA:3.40.50.300 616 935 1.2E-138 T 11-10-2018 TVD_02490 14754fa018ff4005b6b5fd37d5f11f4d 950 Gene3D G3DSA:3.40.50.300 6 594 2.8E-246 T 11-10-2018 TVD_02490 14754fa018ff4005b6b5fd37d5f11f4d 950 SUPERFAMILY SSF52540 1 569 2.63E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_02490 14754fa018ff4005b6b5fd37d5f11f4d 950 Gene3D G3DSA:1.20.1580.10 691 829 1.2E-138 T 11-10-2018 TVD_02490 14754fa018ff4005b6b5fd37d5f11f4d 950 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_02490 14754fa018ff4005b6b5fd37d5f11f4d 950 SUPERFAMILY SSF52540 620 910 2.62E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_02490 14754fa018ff4005b6b5fd37d5f11f4d 950 Gene3D G3DSA:3.30.190.20 130 239 2.8E-246 T 11-10-2018 TVD_02490 14754fa018ff4005b6b5fd37d5f11f4d 950 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 924 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 TVD_02490 14754fa018ff4005b6b5fd37d5f11f4d 950 Gene3D G3DSA:1.20.1580.10 90 492 2.8E-246 T 11-10-2018 TVD_02490 14754fa018ff4005b6b5fd37d5f11f4d 950 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.365 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 TVD_02490 14754fa018ff4005b6b5fd37d5f11f4d 950 Pfam PF00005 ABC transporter 805 859 3.5E-5 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_02490 14754fa018ff4005b6b5fd37d5f11f4d 950 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_02490 14754fa018ff4005b6b5fd37d5f11f4d 950 Gene3D G3DSA:1.10.8.280 287 403 2.8E-246 T 11-10-2018 TVD_07585 349812965d7d1ea919bbcb3fa32422a5 235 Gene3D G3DSA:3.60.15.10 10 231 5.3E-58 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_07585 349812965d7d1ea919bbcb3fa32422a5 235 SUPERFAMILY SSF56281 19 214 3.8E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_07585 349812965d7d1ea919bbcb3fa32422a5 235 Pfam PF00753 Metallo-beta-lactamase superfamily 19 185 2.7E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_07585 349812965d7d1ea919bbcb3fa32422a5 235 SMART SM00849 19 185 5.1E-32 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_11555 37e5996e11ab059acfda79cf2e682034 395 SUPERFAMILY SSF53901 1 236 1.32E-37 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TVD_11555 37e5996e11ab059acfda79cf2e682034 395 SUPERFAMILY SSF53901 209 393 1.77E-45 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TVD_11555 37e5996e11ab059acfda79cf2e682034 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 242 352 7.2E-24 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal TVD_11555 37e5996e11ab059acfda79cf2e682034 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 235 1.2E-25 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TVD_11555 37e5996e11ab059acfda79cf2e682034 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site TVD_11555 37e5996e11ab059acfda79cf2e682034 395 SMART SM00825 Beta-ketoacyl synthase 14 395 5.9E-9 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TVD_11555 37e5996e11ab059acfda79cf2e682034 395 Gene3D G3DSA:3.40.47.10 4 395 1.2E-74 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TVD_05305 a9e28270e7d48f8a1755512c92f46e5a 439 Gene3D G3DSA:3.40.50.300 2 214 6.6E-78 T 11-10-2018 TVD_05305 a9e28270e7d48f8a1755512c92f46e5a 439 Gene3D G3DSA:3.40.50.300 218 386 3.5E-48 T 11-10-2018 TVD_05305 a9e28270e7d48f8a1755512c92f46e5a 439 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 157 165 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site TVD_05305 a9e28270e7d48f8a1755512c92f46e5a 439 Pfam PF00270 DEAD/DEAH box helicase 28 200 1.0E-51 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TVD_05305 a9e28270e7d48f8a1755512c92f46e5a 439 Pfam PF00271 Helicase conserved C-terminal domain 237 343 9.5E-27 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_05305 a9e28270e7d48f8a1755512c92f46e5a 439 SMART SM00487 23 226 3.3E-60 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_05305 a9e28270e7d48f8a1755512c92f46e5a 439 SUPERFAMILY SSF52540 78 361 1.65E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_05305 a9e28270e7d48f8a1755512c92f46e5a 439 SMART SM00490 262 343 1.1E-30 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 10 800 9.5E-286 T 11-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 Pfam PF04324 BFD-like [2Fe-2S] binding domain 489 539 3.4E-15 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 Pfam PF04324 BFD-like [2Fe-2S] binding domain 426 474 3.9E-13 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 Gene3D G3DSA:3.50.50.60 119 243 2.8E-92 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 SUPERFAMILY SSF56014 639 803 3.79E-51 T 11-10-2018 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 8.7E-22 T 11-10-2018 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 8.7E-22 T 11-10-2018 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 8.7E-22 T 11-10-2018 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 8.7E-22 T 11-10-2018 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 8.7E-22 T 11-10-2018 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 PIRSF PIRSF037149 1 820 0.0 T 11-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 638 772 6.0E-27 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 Gene3D G3DSA:3.50.50.60 11 308 2.8E-92 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 SUPERFAMILY SSF51905 6 197 6.35E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 176 9.6E-14 T 11-10-2018 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 9.6E-14 T 11-10-2018 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 237 251 9.6E-14 T 11-10-2018 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 9.6E-14 T 11-10-2018 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 285 1.3E-53 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 Gene3D G3DSA:3.30.413.10 637 801 7.7E-36 T 11-10-2018 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 SUPERFAMILY SSF55124 525 647 1.8E-25 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 Gene3D G3DSA:1.10.10.1100 425 478 7.4E-9 T 11-10-2018 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 PRINTS PR00397 Sirohaem Fe-binding site signature 642 660 1.4E-6 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 PRINTS PR00397 Sirohaem Fe-binding site signature 685 703 1.4E-6 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 685 701 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 Gene3D G3DSA:3.30.390.30 320 380 7.1E-8 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 565 627 2.8E-14 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 TVD_03420 b0b64a07de6321b5869575248ec19e2f 829 SUPERFAMILY SSF51905 147 313 6.39E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_04600 4e64fb5e6aa248df604ad07b156c0880 194 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 3 176 3.3E-80 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 TVD_04600 4e64fb5e6aa248df604ad07b156c0880 194 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 3 164 25.073 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 TVD_04600 4e64fb5e6aa248df604ad07b156c0880 194 SUPERFAMILY SSF54862 36 171 1.56E-31 T 11-10-2018 TVD_04600 4e64fb5e6aa248df604ad07b156c0880 194 PIRSF PIRSF005784 2 186 1.5E-84 T 11-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 TVD_04600 4e64fb5e6aa248df604ad07b156c0880 194 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 142 153 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_04600 4e64fb5e6aa248df604ad07b156c0880 194 Gene3D G3DSA:1.10.15.40 37 82 2.4E-9 T 11-10-2018 TVD_04600 4e64fb5e6aa248df604ad07b156c0880 194 Pfam PF14697 4Fe-4S dicluster domain 105 159 6.5E-18 T 11-10-2018 TVD_04600 4e64fb5e6aa248df604ad07b156c0880 194 Gene3D G3DSA:3.30.70.20 83 175 7.5E-22 T 11-10-2018 TVD_04600 4e64fb5e6aa248df604ad07b156c0880 194 Pfam PF04060 Putative Fe-S cluster 43 75 6.6E-16 T 11-10-2018 IPR007202 4Fe-4S domain GO:0051536 TVD_00630 6d10c35ffb40028e6e13bdccfd911806 745 Pfam PF13426 PAS domain 111 216 0.013 T 11-10-2018 IPR000014 PAS domain TVD_00630 6d10c35ffb40028e6e13bdccfd911806 745 SMART SM00091 225 291 3.5 T 11-10-2018 IPR000014 PAS domain TVD_00630 6d10c35ffb40028e6e13bdccfd911806 745 SMART SM00091 100 169 2.2 T 11-10-2018 IPR000014 PAS domain TVD_00630 6d10c35ffb40028e6e13bdccfd911806 745 Pfam PF13188 PAS domain 225 280 0.0025 T 11-10-2018 IPR000014 PAS domain TVD_00630 6d10c35ffb40028e6e13bdccfd911806 745 Gene3D G3DSA:1.10.287.950 346 685 3.2E-94 T 11-10-2018 TVD_00630 6d10c35ffb40028e6e13bdccfd911806 745 SUPERFAMILY SSF58104 404 684 5.1E-79 T 11-10-2018 TVD_00630 6d10c35ffb40028e6e13bdccfd911806 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 458 487 6.5E-55 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_00630 6d10c35ffb40028e6e13bdccfd911806 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 535 562 6.5E-55 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_00630 6d10c35ffb40028e6e13bdccfd911806 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 612 641 6.5E-55 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_00630 6d10c35ffb40028e6e13bdccfd911806 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 564 593 6.5E-55 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_00630 6d10c35ffb40028e6e13bdccfd911806 745 SMART SM00283 437 684 6.0E-101 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_00630 6d10c35ffb40028e6e13bdccfd911806 745 Gene3D G3DSA:3.30.450.20 98 216 6.1E-37 T 11-10-2018 TVD_00630 6d10c35ffb40028e6e13bdccfd911806 745 Gene3D G3DSA:3.30.450.20 222 339 9.4E-18 T 11-10-2018 TVD_00630 6d10c35ffb40028e6e13bdccfd911806 745 SUPERFAMILY SSF55785 219 338 4.76E-6 T 11-10-2018 IPR035965 PAS domain superfamily TVD_00630 6d10c35ffb40028e6e13bdccfd911806 745 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 496 652 1.8E-57 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_12045 ca148781f72256aabe0a528a3b011b28 440 Gene3D G3DSA:3.30.559.10 196 440 5.7E-98 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 TVD_12045 ca148781f72256aabe0a528a3b011b28 440 Gene3D G3DSA:4.10.320.10 146 190 2.2E-20 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 TVD_12045 ca148781f72256aabe0a528a3b011b28 440 Pfam PF02817 e3 binding domain 147 181 2.8E-16 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 TVD_12045 ca148781f72256aabe0a528a3b011b28 440 SUPERFAMILY SSF47005 145 185 7.72E-13 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 TVD_12045 ca148781f72256aabe0a528a3b011b28 440 SUPERFAMILY SSF51230 3 96 2.75E-22 T 11-10-2018 IPR011053 Single hybrid motif TVD_12045 ca148781f72256aabe0a528a3b011b28 440 Pfam PF00364 Biotin-requiring enzyme 6 77 7.6E-20 T 11-10-2018 IPR000089 Biotin/lipoyl attachment TVD_12045 ca148781f72256aabe0a528a3b011b28 440 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 212 440 3.1E-84 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 TVD_12045 ca148781f72256aabe0a528a3b011b28 440 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 TVD_12045 ca148781f72256aabe0a528a3b011b28 440 SUPERFAMILY SSF52777 200 440 2.36E-86 T 11-10-2018 TVD_12045 ca148781f72256aabe0a528a3b011b28 440 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 3 440 5.7E-183 T 11-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 TVD_12045 ca148781f72256aabe0a528a3b011b28 440 Gene3D G3DSA:2.40.50.100 5 82 1.7E-21 T 11-10-2018 TVD_11850 54b408764dbccf270b9307f0af89138b 472 SUPERFAMILY SSF88723 10 164 6.47E-13 T 11-10-2018 IPR029060 PIN-like domain superfamily TVD_11850 54b408764dbccf270b9307f0af89138b 472 Pfam PF02562 PhoH-like protein 260 460 1.3E-53 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 TVD_11850 54b408764dbccf270b9307f0af89138b 472 SMART SM00670 10 150 3.5E-11 T 11-10-2018 IPR002716 PIN domain TVD_11850 54b408764dbccf270b9307f0af89138b 472 Gene3D G3DSA:3.40.50.300 258 470 4.2E-64 T 11-10-2018 TVD_11850 54b408764dbccf270b9307f0af89138b 472 SUPERFAMILY SSF52540 127 453 2.02E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_11850 54b408764dbccf270b9307f0af89138b 472 Pfam PF13638 PIN domain 12 162 8.8E-39 T 11-10-2018 IPR002716 PIN domain TVD_11850 54b408764dbccf270b9307f0af89138b 472 Gene3D G3DSA:3.40.50.1010 7 164 1.6E-21 T 11-10-2018 TVD_04160 22f68ca2e8d6fae5dc4871c29dbe3a6b 272 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 2.0E-40 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TVD_04160 22f68ca2e8d6fae5dc4871c29dbe3a6b 272 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 272 1.6E-81 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TVD_04160 22f68ca2e8d6fae5dc4871c29dbe3a6b 272 Pfam PF00303 Thymidylate synthase 2 272 2.5E-115 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TVD_04160 22f68ca2e8d6fae5dc4871c29dbe3a6b 272 Hamap MF_00008 Thymidylate synthase [thyA]. 1 272 40.243 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TVD_04160 22f68ca2e8d6fae5dc4871c29dbe3a6b 272 PRINTS PR00108 Thymidylate synthase family signature 149 164 6.6E-40 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TVD_04160 22f68ca2e8d6fae5dc4871c29dbe3a6b 272 PRINTS PR00108 Thymidylate synthase family signature 167 193 6.6E-40 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TVD_04160 22f68ca2e8d6fae5dc4871c29dbe3a6b 272 PRINTS PR00108 Thymidylate synthase family signature 205 222 6.6E-40 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TVD_04160 22f68ca2e8d6fae5dc4871c29dbe3a6b 272 PRINTS PR00108 Thymidylate synthase family signature 42 63 6.6E-40 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TVD_04160 22f68ca2e8d6fae5dc4871c29dbe3a6b 272 SUPERFAMILY SSF55831 1 272 3.4E-123 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TVD_04160 22f68ca2e8d6fae5dc4871c29dbe3a6b 272 Gene3D G3DSA:3.30.572.10 1 272 4.8E-121 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 TVD_01615 1ba32702c1a4071deaef558dcf361cb7 377 SUPERFAMILY SSF52283 4 169 8.42E-41 T 11-10-2018 TVD_01615 1ba32702c1a4071deaef558dcf361cb7 377 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 144 366 7.5E-69 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain TVD_01615 1ba32702c1a4071deaef558dcf361cb7 377 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 7 137 2.5E-37 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal TVD_01615 1ba32702c1a4071deaef558dcf361cb7 377 SMART SM01003 6 138 1.9E-51 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal TVD_01615 1ba32702c1a4071deaef558dcf361cb7 377 SUPERFAMILY SSF51735 139 315 1.85E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_01615 1ba32702c1a4071deaef558dcf361cb7 377 Gene3D G3DSA:3.40.50.720 138 316 1.6E-134 T 11-10-2018 TVD_01615 1ba32702c1a4071deaef558dcf361cb7 377 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 171 196 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 TVD_01615 1ba32702c1a4071deaef558dcf361cb7 377 SMART SM01002 147 309 7.9E-77 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain TVD_01615 1ba32702c1a4071deaef558dcf361cb7 377 Gene3D G3DSA:3.40.50.720 6 362 1.6E-134 T 11-10-2018 TVD_09780 ff63f9105fe693c3bbaa20819fd1a962 469 SMART SM00840 351 410 7.7E-13 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 TVD_09780 ff63f9105fe693c3bbaa20819fd1a962 469 Gene3D G3DSA:3.40.50.620 1 316 2.7E-121 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_09780 ff63f9105fe693c3bbaa20819fd1a962 469 Pfam PF09190 DALR domain 354 410 6.8E-9 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 TVD_09780 ff63f9105fe693c3bbaa20819fd1a962 469 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 7 467 8.7E-147 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 TVD_09780 ff63f9105fe693c3bbaa20819fd1a962 469 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 197 215 4.2E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TVD_09780 ff63f9105fe693c3bbaa20819fd1a962 469 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 228 249 4.2E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TVD_09780 ff63f9105fe693c3bbaa20819fd1a962 469 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 30 41 4.2E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TVD_09780 ff63f9105fe693c3bbaa20819fd1a962 469 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 68 77 4.2E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TVD_09780 ff63f9105fe693c3bbaa20819fd1a962 469 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 7 468 37.403 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 TVD_09780 ff63f9105fe693c3bbaa20819fd1a962 469 SUPERFAMILY SSF52374 8 325 3.49E-88 T 11-10-2018 TVD_09780 ff63f9105fe693c3bbaa20819fd1a962 469 Gene3D G3DSA:1.20.120.640 317 468 2.2E-33 T 11-10-2018 TVD_09780 ff63f9105fe693c3bbaa20819fd1a962 469 SUPERFAMILY SSF47323 327 467 1.7E-29 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_09780 ff63f9105fe693c3bbaa20819fd1a962 469 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 21 324 8.2E-117 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 TVD_04105 367661998360d034392c544a5abca581 130 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 42.357 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 TVD_04105 367661998360d034392c544a5abca581 130 Gene3D G3DSA:2.40.50.100 2 129 4.8E-54 T 11-10-2018 TVD_04105 367661998360d034392c544a5abca581 130 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 129 2.0E-52 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 TVD_04105 367661998360d034392c544a5abca581 130 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 TVD_04105 367661998360d034392c544a5abca581 130 Pfam PF01597 Glycine cleavage H-protein 8 127 6.0E-48 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate TVD_04105 367661998360d034392c544a5abca581 130 SUPERFAMILY SSF51230 5 127 7.12E-46 T 11-10-2018 IPR011053 Single hybrid motif TVD_07205 ad4323d4d930d3be21b8f52e790bb444 202 SUPERFAMILY SSF53098 8 194 6.98E-64 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_07205 ad4323d4d930d3be21b8f52e790bb444 202 Gene3D G3DSA:3.30.420.10 2 201 9.2E-72 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TVD_07205 ad4323d4d930d3be21b8f52e790bb444 202 Hamap MF_00052_B Ribonuclease HII [rnhB]. 10 189 37.192 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 TVD_07205 ad4323d4d930d3be21b8f52e790bb444 202 Pfam PF01351 Ribonuclease HII 12 187 3.2E-37 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain TVD_00025 5de043ff072e030970fb4265b7a4c429 260 SUPERFAMILY SSF51556 3 254 4.26E-75 T 11-10-2018 IPR032466 Metal-dependent hydrolase TVD_00025 5de043ff072e030970fb4265b7a4c429 260 Gene3D G3DSA:3.20.20.140 1 255 3.5E-76 T 11-10-2018 TVD_00025 5de043ff072e030970fb4265b7a4c429 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 TVD_00025 5de043ff072e030970fb4265b7a4c429 260 Pfam PF01026 TatD related DNase 4 252 4.0E-62 T 11-10-2018 IPR001130 TatD family GO:0016788 TVD_00025 5de043ff072e030970fb4265b7a4c429 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 TVD_00025 5de043ff072e030970fb4265b7a4c429 260 PIRSF PIRSF005902 1 256 1.3E-59 T 11-10-2018 IPR001130 TatD family GO:0016788 TVD_03100 d890bb935db17bc92e76d57217e1199b 689 SMART SM00267 215 419 3.9E-60 T 11-10-2018 IPR000160 GGDEF domain TVD_03100 d890bb935db17bc92e76d57217e1199b 689 SUPERFAMILY SSF55781 45 218 5.45E-16 T 11-10-2018 TVD_03100 d890bb935db17bc92e76d57217e1199b 689 Gene3D G3DSA:3.30.450.40 43 219 2.4E-24 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_03100 d890bb935db17bc92e76d57217e1199b 689 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 312 417 5.8E-11 T 11-10-2018 IPR000160 GGDEF domain TVD_03100 d890bb935db17bc92e76d57217e1199b 689 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 224 309 3.5E-23 T 11-10-2018 IPR000160 GGDEF domain TVD_03100 d890bb935db17bc92e76d57217e1199b 689 Gene3D G3DSA:3.30.70.270 221 310 1.6E-29 T 11-10-2018 TVD_03100 d890bb935db17bc92e76d57217e1199b 689 Pfam PF00563 EAL domain 436 670 2.7E-69 T 11-10-2018 IPR001633 EAL domain TVD_03100 d890bb935db17bc92e76d57217e1199b 689 Gene3D G3DSA:3.20.20.450 430 684 2.7E-95 T 11-10-2018 IPR035919 EAL domain superfamily TVD_03100 d890bb935db17bc92e76d57217e1199b 689 Pfam PF13185 GAF domain 64 214 4.3E-15 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_03100 d890bb935db17bc92e76d57217e1199b 689 SMART SM00065 64 223 6.3E-5 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_03100 d890bb935db17bc92e76d57217e1199b 689 SUPERFAMILY SSF55073 231 309 2.82E-23 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_03100 d890bb935db17bc92e76d57217e1199b 689 Gene3D G3DSA:3.30.70.270 311 429 1.4E-25 T 11-10-2018 TVD_03100 d890bb935db17bc92e76d57217e1199b 689 Pfam PF00990 Diguanylate cyclase, GGDEF domain 312 413 1.3E-13 T 11-10-2018 IPR000160 GGDEF domain TVD_03100 d890bb935db17bc92e76d57217e1199b 689 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 309 4.4E-27 T 11-10-2018 IPR000160 GGDEF domain TVD_03100 d890bb935db17bc92e76d57217e1199b 689 SMART SM00052 429 675 6.5E-102 T 11-10-2018 IPR001633 EAL domain TVD_03100 d890bb935db17bc92e76d57217e1199b 689 SUPERFAMILY SSF141868 434 681 1.19E-85 T 11-10-2018 IPR035919 EAL domain superfamily TVD_03100 d890bb935db17bc92e76d57217e1199b 689 SUPERFAMILY SSF55073 311 421 5.73E-20 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_01515 0ec22f196cedf67e32954c950ade27a3 193 Gene3D G3DSA:3.40.30.10 3 193 1.3E-56 T 11-10-2018 TVD_01515 0ec22f196cedf67e32954c950ade27a3 193 SUPERFAMILY SSF52833 5 191 2.43E-49 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_01515 0ec22f196cedf67e32954c950ade27a3 193 Pfam PF00578 AhpC/TSA family 12 136 8.6E-18 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TVD_05310 c7b5b88c17b27fe57099f85bce82dd7e 409 SMART SM00304 165 225 16.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_05310 c7b5b88c17b27fe57099f85bce82dd7e 409 SMART SM00304 76 130 1.0E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_05310 c7b5b88c17b27fe57099f85bce82dd7e 409 SUPERFAMILY SSF58104 98 407 9.55E-81 T 11-10-2018 TVD_05310 c7b5b88c17b27fe57099f85bce82dd7e 409 Pfam PF00672 HAMP domain 78 126 2.7E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_05310 c7b5b88c17b27fe57099f85bce82dd7e 409 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 190 373 6.9E-46 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_05310 c7b5b88c17b27fe57099f85bce82dd7e 409 Gene3D G3DSA:1.10.287.950 76 408 2.6E-78 T 11-10-2018 TVD_05310 c7b5b88c17b27fe57099f85bce82dd7e 409 SMART SM00283 145 406 1.2E-85 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_12105 ba79ef8d7c137fbe32db38e0b8b2aca0 432 Gene3D G3DSA:3.40.50.720 159 311 4.2E-45 T 11-10-2018 TVD_12105 ba79ef8d7c137fbe32db38e0b8b2aca0 432 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 414 4.4E-143 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 TVD_12105 ba79ef8d7c137fbe32db38e0b8b2aca0 432 SUPERFAMILY SSF69742 2 156 4.97E-47 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 TVD_12105 ba79ef8d7c137fbe32db38e0b8b2aca0 432 SUPERFAMILY SSF69075 315 415 2.75E-25 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 TVD_12105 ba79ef8d7c137fbe32db38e0b8b2aca0 432 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 1.5E-46 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase TVD_12105 ba79ef8d7c137fbe32db38e0b8b2aca0 432 PIRSF PIRSF000445 1 428 1.6E-160 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 TVD_12105 ba79ef8d7c137fbe32db38e0b8b2aca0 432 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 415 1.0E-23 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 TVD_12105 ba79ef8d7c137fbe32db38e0b8b2aca0 432 SUPERFAMILY SSF51735 160 313 8.84E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_12105 ba79ef8d7c137fbe32db38e0b8b2aca0 432 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 5 154 1.2E-48 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 TVD_12105 ba79ef8d7c137fbe32db38e0b8b2aca0 432 Gene3D G3DSA:3.30.460.30 1 156 6.3E-57 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 TVD_12105 ba79ef8d7c137fbe32db38e0b8b2aca0 432 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 1 416 31.202 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 TVD_07160 536bc84f33792761cd71a85774602d03 555 Pfam PF06418 CTP synthase N-terminus 3 265 3.2E-125 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TVD_07160 536bc84f33792761cd71a85774602d03 555 SUPERFAMILY SSF52540 1 268 6.31E-123 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_07160 536bc84f33792761cd71a85774602d03 555 TIGRFAM TIGR00337 PyrG: CTP synthase 2 537 1.5E-247 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TVD_07160 536bc84f33792761cd71a85774602d03 555 Hamap MF_01227 CTP synthase [pyrG]. 2 542 51.499 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 TVD_07160 536bc84f33792761cd71a85774602d03 555 Gene3D G3DSA:3.40.50.880 285 546 5.4E-102 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_07160 536bc84f33792761cd71a85774602d03 555 Pfam PF00117 Glutamine amidotransferase class-I 300 535 5.1E-55 T 11-10-2018 IPR017926 Glutamine amidotransferase TVD_07160 536bc84f33792761cd71a85774602d03 555 Gene3D G3DSA:3.40.50.300 1 283 4.9E-132 T 11-10-2018 TVD_07160 536bc84f33792761cd71a85774602d03 555 SUPERFAMILY SSF52317 287 543 1.2E-85 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_12625 083bffeebd6a70a1f19baaf9f549a01e 192 SUPERFAMILY SSF50341 34 171 8.24E-24 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TVD_12625 083bffeebd6a70a1f19baaf9f549a01e 192 Gene3D G3DSA:2.30.30.40 39 162 3.6E-18 T 11-10-2018 TVD_12625 083bffeebd6a70a1f19baaf9f549a01e 192 SMART SM00260 31 168 1.2E-14 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_12625 083bffeebd6a70a1f19baaf9f549a01e 192 Pfam PF01584 CheW-like domain 36 170 4.0E-24 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_12625 083bffeebd6a70a1f19baaf9f549a01e 192 Gene3D G3DSA:2.40.50.180 52 167 3.6E-18 T 11-10-2018 TVD_10500 1979d3dacc4442c6db3228b5313ce117 338 Gene3D G3DSA:1.10.3730.40 182 338 1.6E-71 T 11-10-2018 TVD_10500 1979d3dacc4442c6db3228b5313ce117 338 SUPERFAMILY SSF51735 1 182 1.43E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_10500 1979d3dacc4442c6db3228b5313ce117 338 PIRSF PIRSF000116 201 332 9.4E-14 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TVD_10500 1979d3dacc4442c6db3228b5313ce117 338 PIRSF PIRSF000116 4 205 2.4E-46 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TVD_10500 1979d3dacc4442c6db3228b5313ce117 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 44.379 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TVD_10500 1979d3dacc4442c6db3228b5313ce117 338 SUPERFAMILY SSF48179 183 332 3.4E-68 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TVD_10500 1979d3dacc4442c6db3228b5313ce117 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 1.5E-72 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TVD_10500 1979d3dacc4442c6db3228b5313ce117 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 1.9E-127 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TVD_10500 1979d3dacc4442c6db3228b5313ce117 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 2.9E-62 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 TVD_10500 1979d3dacc4442c6db3228b5313ce117 338 Gene3D G3DSA:3.40.50.720 1 181 2.2E-77 T 11-10-2018 TVD_04405 61f1c764dcd6a1bcea52cf057d2496f9 248 Pfam PF13419 Haloacid dehalogenase-like hydrolase 116 215 1.5E-13 T 11-10-2018 TVD_04405 61f1c764dcd6a1bcea52cf057d2496f9 248 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 111 210 2.3E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_04405 61f1c764dcd6a1bcea52cf057d2496f9 248 Gene3D G3DSA:1.20.120.1600 34 119 1.3E-59 T 11-10-2018 TVD_04405 61f1c764dcd6a1bcea52cf057d2496f9 248 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 177 197 7.9E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_04405 61f1c764dcd6a1bcea52cf057d2496f9 248 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 20 31 7.9E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_04405 61f1c764dcd6a1bcea52cf057d2496f9 248 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 159 175 7.9E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_04405 61f1c764dcd6a1bcea52cf057d2496f9 248 Gene3D G3DSA:3.40.50.1000 22 227 1.3E-59 T 11-10-2018 IPR023214 HAD superfamily TVD_04405 61f1c764dcd6a1bcea52cf057d2496f9 248 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 111 215 1.1E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_04405 61f1c764dcd6a1bcea52cf057d2496f9 248 SUPERFAMILY SSF56784 20 244 2.25E-37 T 11-10-2018 IPR036412 HAD-like superfamily TVD_02965 f7f49e043e88327555a25da98b4ff2c2 786 Pfam PF02687 FtsX-like permease family 687 773 2.3E-9 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TVD_02965 f7f49e043e88327555a25da98b4ff2c2 786 Pfam PF02687 FtsX-like permease family 296 389 1.2E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TVD_02965 f7f49e043e88327555a25da98b4ff2c2 786 Pfam PF12704 MacB-like periplasmic core domain 437 629 2.1E-6 T 11-10-2018 IPR025857 MacB-like periplasmic core domain TVD_07335 d967fc0981d9ddb693bcf2fd4f7d2ee7 248 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 19 236 2.2E-79 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 TVD_07335 d967fc0981d9ddb693bcf2fd4f7d2ee7 248 Pfam PF13489 Methyltransferase domain 57 212 9.3E-26 T 11-10-2018 TVD_07335 d967fc0981d9ddb693bcf2fd4f7d2ee7 248 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 19 242 35.969 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 TVD_07335 d967fc0981d9ddb693bcf2fd4f7d2ee7 248 SUPERFAMILY SSF53335 23 240 1.06E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_07335 d967fc0981d9ddb693bcf2fd4f7d2ee7 248 Gene3D G3DSA:3.40.50.150 19 242 2.3E-72 T 11-10-2018 TVD_02085 559cfc2567f77e476726eb2c050e0032 249 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 236 2.0E-56 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 TVD_02085 559cfc2567f77e476726eb2c050e0032 249 SUPERFAMILY SSF102705 3 248 9.55E-78 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily TVD_02085 559cfc2567f77e476726eb2c050e0032 249 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 4 248 1.4E-60 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 TVD_02085 559cfc2567f77e476726eb2c050e0032 249 Gene3D G3DSA:3.40.1390.30 98 220 9.7E-78 T 11-10-2018 TVD_02085 559cfc2567f77e476726eb2c050e0032 249 Gene3D G3DSA:3.40.1390.30 15 234 9.7E-78 T 11-10-2018 TVD_12090 6130e8163284f78478a7fb31f3e10e56 284 SUPERFAMILY SSF55060 156 273 2.4E-25 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TVD_12090 6130e8163284f78478a7fb31f3e10e56 284 Gene3D G3DSA:3.30.230.10 1 154 4.5E-55 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TVD_12090 6130e8163284f78478a7fb31f3e10e56 284 Gene3D G3DSA:3.30.70.890 155 274 4.1E-26 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily TVD_12090 6130e8163284f78478a7fb31f3e10e56 284 Pfam PF00288 GHMP kinases N terminal domain 81 138 3.4E-12 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 TVD_12090 6130e8163284f78478a7fb31f3e10e56 284 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 262 31.215 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 TVD_12090 6130e8163284f78478a7fb31f3e10e56 284 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 271 2.3E-68 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 TVD_12090 6130e8163284f78478a7fb31f3e10e56 284 PIRSF PIRSF010376 1 275 4.4E-79 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 TVD_12090 6130e8163284f78478a7fb31f3e10e56 284 Pfam PF08544 GHMP kinases C terminal 200 251 4.7E-6 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain TVD_12090 6130e8163284f78478a7fb31f3e10e56 284 SUPERFAMILY SSF54211 3 152 9.11E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_04020 2b287c343494d4366bf51ae914d3e012 141 SUPERFAMILY SSF56925 32 138 8.63E-15 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TVD_04020 2b287c343494d4366bf51ae914d3e012 141 Pfam PF13505 Outer membrane protein beta-barrel domain 10 139 3.2E-11 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel TVD_04020 2b287c343494d4366bf51ae914d3e012 141 Gene3D G3DSA:2.40.160.20 16 141 6.3E-21 T 11-10-2018 TVD_12020 f2187719290d27484a15ac34db5440b6 262 PRINTS PR01805 VacJ lipoprotein signature 34 47 1.3E-21 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 TVD_12020 f2187719290d27484a15ac34db5440b6 262 PRINTS PR01805 VacJ lipoprotein signature 51 67 1.3E-21 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 TVD_12020 f2187719290d27484a15ac34db5440b6 262 PRINTS PR01805 VacJ lipoprotein signature 101 118 1.3E-21 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 TVD_12020 f2187719290d27484a15ac34db5440b6 262 PRINTS PR01805 VacJ lipoprotein signature 137 154 1.3E-21 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 TVD_12020 f2187719290d27484a15ac34db5440b6 262 Pfam PF04333 MlaA lipoprotein 33 228 2.9E-70 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 TVD_13175 40ab5050f57d3d15ef6f3b8c587dac55 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 61 1.6E-15 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TVD_13175 40ab5050f57d3d15ef6f3b8c587dac55 162 Pfam PF01467 Cytidylyltransferase-like 6 134 2.8E-20 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TVD_13175 40ab5050f57d3d15ef6f3b8c587dac55 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 7.5E-56 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TVD_13175 40ab5050f57d3d15ef6f3b8c587dac55 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 34.117 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TVD_13175 40ab5050f57d3d15ef6f3b8c587dac55 162 Gene3D G3DSA:3.40.50.620 1 160 1.5E-54 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_13175 40ab5050f57d3d15ef6f3b8c587dac55 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 8.3E-50 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TVD_13175 40ab5050f57d3d15ef6f3b8c587dac55 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 8.3E-50 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TVD_13175 40ab5050f57d3d15ef6f3b8c587dac55 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 8.3E-50 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TVD_13175 40ab5050f57d3d15ef6f3b8c587dac55 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 8.3E-50 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TVD_13175 40ab5050f57d3d15ef6f3b8c587dac55 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 8.3E-50 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 TVD_13175 40ab5050f57d3d15ef6f3b8c587dac55 162 SUPERFAMILY SSF52374 4 158 1.02E-42 T 11-10-2018 TVD_13175 40ab5050f57d3d15ef6f3b8c587dac55 162 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 69 0.004 T 11-10-2018 TVD_09400 4e91af861d849bacb57dddec352be458 474 SMART SM00267 325 467 7.9E-4 T 11-10-2018 IPR000160 GGDEF domain TVD_09400 4e91af861d849bacb57dddec352be458 474 Pfam PF00990 Diguanylate cyclase, GGDEF domain 353 463 3.7E-11 T 11-10-2018 IPR000160 GGDEF domain TVD_09400 4e91af861d849bacb57dddec352be458 474 Gene3D G3DSA:3.30.70.270 337 474 9.6E-13 T 11-10-2018 TVD_09400 4e91af861d849bacb57dddec352be458 474 SUPERFAMILY SSF55073 352 459 1.41E-10 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_13725 ef8c1251975da2bb0bb1caf01168d6c5 516 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 11 508 4.4E-187 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_13725 ef8c1251975da2bb0bb1caf01168d6c5 516 Gene3D G3DSA:3.40.1450.10 83 309 5.9E-197 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_13725 ef8c1251975da2bb0bb1caf01168d6c5 516 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 88 296 8.1E-71 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_13725 ef8c1251975da2bb0bb1caf01168d6c5 516 PIRSF PIRSF001492 5 511 2.4E-185 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_13725 ef8c1251975da2bb0bb1caf01168d6c5 516 Gene3D G3DSA:3.40.720.10 11 508 5.9E-197 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TVD_13725 ef8c1251975da2bb0bb1caf01168d6c5 516 SUPERFAMILY SSF64158 83 307 9.81E-74 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_13725 ef8c1251975da2bb0bb1caf01168d6c5 516 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 10 509 43.839 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_13725 ef8c1251975da2bb0bb1caf01168d6c5 516 SUPERFAMILY SSF53649 9 508 1.96E-67 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TVD_13725 ef8c1251975da2bb0bb1caf01168d6c5 516 Pfam PF01676 Metalloenzyme superfamily 11 497 1.7E-68 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 TVD_12770 d7ccc078cd87dc14563c38acdceecc00 67 SUPERFAMILY SSF143800 1 66 1.26E-27 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_12770 d7ccc078cd87dc14563c38acdceecc00 67 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 29.837 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_12770 d7ccc078cd87dc14563c38acdceecc00 67 PRINTS PR01249 Ribosomal protein L31 signature 47 65 2.7E-22 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_12770 d7ccc078cd87dc14563c38acdceecc00 67 PRINTS PR01249 Ribosomal protein L31 signature 32 47 2.7E-22 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_12770 d7ccc078cd87dc14563c38acdceecc00 67 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.7E-22 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_12770 d7ccc078cd87dc14563c38acdceecc00 67 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 5.5E-36 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_12770 d7ccc078cd87dc14563c38acdceecc00 67 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_12770 d7ccc078cd87dc14563c38acdceecc00 67 Gene3D G3DSA:2.30.170.50 1 67 4.8E-34 T 11-10-2018 TVD_12770 d7ccc078cd87dc14563c38acdceecc00 67 Pfam PF01197 Ribosomal protein L31 1 66 1.8E-34 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_01165 85857ea8bf57b85f369de70367126097 575 Gene3D G3DSA:3.30.465.10 501 571 1.8E-5 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TVD_01165 85857ea8bf57b85f369de70367126097 575 SUPERFAMILY SSF56176 499 571 1.53E-6 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TVD_01165 85857ea8bf57b85f369de70367126097 575 SMART SM01091 494 573 1.6E-7 T 11-10-2018 IPR005170 Transporter-associated domain TVD_01165 85857ea8bf57b85f369de70367126097 575 Pfam PF00999 Sodium/hydrogen exchanger family 12 385 2.5E-52 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TVD_01165 85857ea8bf57b85f369de70367126097 575 Gene3D G3DSA:1.20.1530.20 4 390 6.9E-21 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily TVD_01165 85857ea8bf57b85f369de70367126097 575 Gene3D G3DSA:3.30.70.1450 406 483 2.6E-6 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_01165 85857ea8bf57b85f369de70367126097 575 Pfam PF03471 Transporter associated domain 498 571 5.2E-9 T 11-10-2018 IPR005170 Transporter-associated domain TVD_09720 fba23a8c22bb1d9ad0e197871367db5e 408 Gene3D G3DSA:3.30.413.10 291 408 3.1E-38 T 11-10-2018 TVD_09720 fba23a8c22bb1d9ad0e197871367db5e 408 PIRSF PIRSF004640 1 407 1.2E-134 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TVD_09720 fba23a8c22bb1d9ad0e197871367db5e 408 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 5 399 30.279 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TVD_09720 fba23a8c22bb1d9ad0e197871367db5e 408 Pfam PF04551 GcpE protein 11 397 8.3E-115 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TVD_09720 fba23a8c22bb1d9ad0e197871367db5e 408 SUPERFAMILY SSF56014 292 406 1.44E-7 T 11-10-2018 TVD_09720 fba23a8c22bb1d9ad0e197871367db5e 408 Gene3D G3DSA:3.20.20.20 4 290 5.9E-98 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_09720 fba23a8c22bb1d9ad0e197871367db5e 408 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 7 394 4.5E-121 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 TVD_10035 3c4a775b39f36261f501bb66f3d69cbb 125 Pfam PF02635 DsrE/DsrF-like family 27 101 7.9E-6 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_10035 3c4a775b39f36261f501bb66f3d69cbb 125 Gene3D G3DSA:3.40.1260.10 1 124 4.9E-20 T 11-10-2018 IPR027396 DsrEFH-like TVD_10035 3c4a775b39f36261f501bb66f3d69cbb 125 SUPERFAMILY SSF75169 9 124 6.67E-10 T 11-10-2018 IPR027396 DsrEFH-like TVD_06155 17a30f64d3836003547e2184f679f4c0 721 Pfam PF13245 AAA domain 257 506 4.6E-19 T 11-10-2018 TVD_06155 17a30f64d3836003547e2184f679f4c0 721 SUPERFAMILY SSF52540 244 717 1.49E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06155 17a30f64d3836003547e2184f679f4c0 721 Pfam PF13361 UvrD-like helicase C-terminal domain 634 711 9.2E-13 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TVD_06155 17a30f64d3836003547e2184f679f4c0 721 Gene3D G3DSA:3.40.50.300 527 721 1.1E-37 T 11-10-2018 TVD_06155 17a30f64d3836003547e2184f679f4c0 721 SUPERFAMILY SSF143011 8 90 3.34E-7 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_01660 efa3fa981910ab83a46de44a14269690 266 PIRSF PIRSF002786 2 227 3.8E-34 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 TVD_01660 efa3fa981910ab83a46de44a14269690 266 Gene3D G3DSA:1.10.40.60 98 201 5.1E-15 T 11-10-2018 IPR038072 GspK, central domain superfamily TVD_01660 efa3fa981910ab83a46de44a14269690 266 SUPERFAMILY SSF158544 99 199 1.75E-16 T 11-10-2018 IPR038072 GspK, central domain superfamily TVD_01660 efa3fa981910ab83a46de44a14269690 266 Pfam PF03934 Type II secretion system (T2SS), protein K 33 221 6.9E-29 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 TVD_07640 8cf757ba439ef845645b99dda6ee4e29 232 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_07640 8cf757ba439ef845645b99dda6ee4e29 232 SMART SM00382 36 224 9.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_07640 8cf757ba439ef845645b99dda6ee4e29 232 Gene3D G3DSA:3.40.50.300 5 230 4.5E-71 T 11-10-2018 TVD_07640 8cf757ba439ef845645b99dda6ee4e29 232 SUPERFAMILY SSF52540 7 226 2.13E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_07640 8cf757ba439ef845645b99dda6ee4e29 232 Pfam PF00005 ABC transporter 27 175 1.7E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 Gene3D G3DSA:3.30.70.1430 596 706 5.6E-231 T 11-10-2018 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 Pfam PF00873 AcrB/AcrD/AcrF family 26 1068 3.3E-153 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 PRINTS PR00702 Acriflavin resistance protein family signature 496 519 9.2E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 9.2E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 PRINTS PR00702 Acriflavin resistance protein family signature 417 441 9.2E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 PRINTS PR00702 Acriflavin resistance protein family signature 59 77 9.2E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 PRINTS PR00702 Acriflavin resistance protein family signature 389 410 9.2E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 Gene3D G3DSA:3.30.70.1440 707 916 5.6E-231 T 11-10-2018 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 SUPERFAMILY SSF82714 756 839 1.57E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 Gene3D G3DSA:3.30.70.1320 153 357 5.6E-231 T 11-10-2018 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 Gene3D G3DSA:1.20.1640.10 36 536 5.6E-231 T 11-10-2018 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 Gene3D G3DSA:3.30.70.1430 61 853 5.6E-231 T 11-10-2018 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 Gene3D G3DSA:3.30.2090.10 755 845 5.6E-231 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 SUPERFAMILY SSF82714 204 285 4.05E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 Gene3D G3DSA:3.30.2090.10 199 290 5.6E-231 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 Gene3D G3DSA:1.20.1640.10 537 1068 5.6E-231 T 11-10-2018 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 SUPERFAMILY SSF82693 155 353 1.15E-7 T 11-10-2018 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 SUPERFAMILY SSF82693 592 707 4.76E-10 T 11-10-2018 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 SUPERFAMILY SSF82693 61 155 2.88E-20 T 11-10-2018 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 SUPERFAMILY SSF82866 322 521 8.5E-36 T 11-10-2018 TVD_09840 222c3941178ec3b198bd80b0ac59fe82 1434 SUPERFAMILY SSF82866 844 1068 3.4E-40 T 11-10-2018 TVD_07215 95426b13944a125165a99ee31e46ebbd 365 Gene3D G3DSA:3.40.640.10 1 242 9.3E-99 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_07215 95426b13944a125165a99ee31e46ebbd 365 SUPERFAMILY SSF53383 8 364 1.99E-119 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_07215 95426b13944a125165a99ee31e46ebbd 365 PIRSF PIRSF000390 3 365 4.2E-115 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TVD_07215 95426b13944a125165a99ee31e46ebbd 365 Gene3D G3DSA:3.90.1150.10 245 363 1.5E-35 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_07215 95426b13944a125165a99ee31e46ebbd 365 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 361 7.0E-131 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TVD_00355 4879683f56ebcf0b75de94075b2c761a 631 Gene3D G3DSA:3.60.20.10 2 186 4.1E-71 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_00355 4879683f56ebcf0b75de94075b2c761a 631 SUPERFAMILY SSF56235 1 226 5.83E-69 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_00355 4879683f56ebcf0b75de94075b2c761a 631 Pfam PF00733 Asparagine synthase 244 625 3.3E-101 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TVD_00355 4879683f56ebcf0b75de94075b2c761a 631 SUPERFAMILY SSF52402 236 622 7.59E-86 T 11-10-2018 TVD_00355 4879683f56ebcf0b75de94075b2c761a 631 Pfam PF13537 Glutamine amidotransferase domain 48 167 5.0E-51 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TVD_00355 4879683f56ebcf0b75de94075b2c761a 631 TIGRFAM TIGR03108 eps_aminotran_1: exosortase A system-associated amidotransferase 1 1 628 0.0 T 11-10-2018 IPR017539 Exosortase 1 system-associated amidotransferase 1 TVD_00355 4879683f56ebcf0b75de94075b2c761a 631 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 562 4.4E-154 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TVD_00355 4879683f56ebcf0b75de94075b2c761a 631 PIRSF PIRSF001589 1 628 4.9E-186 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TVD_02990 39fddfefe2382dc5e00d1234973110f8 545 Gene3D G3DSA:3.30.565.10 383 541 3.8E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_02990 39fddfefe2382dc5e00d1234973110f8 545 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 536 4.7E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_02990 39fddfefe2382dc5e00d1234973110f8 545 SMART SM00388 317 383 3.1E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_02990 39fddfefe2382dc5e00d1234973110f8 545 SMART SM00387 425 536 1.4E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_02990 39fddfefe2382dc5e00d1234973110f8 545 SUPERFAMILY SSF55785 194 263 1.05E-5 T 11-10-2018 IPR035965 PAS domain superfamily TVD_02990 39fddfefe2382dc5e00d1234973110f8 545 Pfam PF00512 His Kinase A (phospho-acceptor) domain 317 383 2.4E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_02990 39fddfefe2382dc5e00d1234973110f8 545 SUPERFAMILY SSF55874 373 535 7.86E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_02990 39fddfefe2382dc5e00d1234973110f8 545 Gene3D G3DSA:3.30.450.20 192 303 9.1E-7 T 11-10-2018 TVD_02990 39fddfefe2382dc5e00d1234973110f8 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 482 2.4E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_02990 39fddfefe2382dc5e00d1234973110f8 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 496 2.4E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_02990 39fddfefe2382dc5e00d1234973110f8 545 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 2.4E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_02990 39fddfefe2382dc5e00d1234973110f8 545 Gene3D G3DSA:1.10.287.130 304 381 2.0E-18 T 11-10-2018 TVD_02990 39fddfefe2382dc5e00d1234973110f8 545 SUPERFAMILY SSF47384 305 383 9.81E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TVD_02045 9af0eeb153081d201feb4b70b82f44c6 273 Pfam PF01026 TatD related DNase 4 266 1.2E-63 T 11-10-2018 IPR001130 TatD family GO:0016788 TVD_02045 9af0eeb153081d201feb4b70b82f44c6 273 Gene3D G3DSA:3.20.20.140 1 271 1.5E-89 T 11-10-2018 TVD_02045 9af0eeb153081d201feb4b70b82f44c6 273 PIRSF PIRSF005902 1 270 7.2E-70 T 11-10-2018 IPR001130 TatD family GO:0016788 TVD_02045 9af0eeb153081d201feb4b70b82f44c6 273 SUPERFAMILY SSF51556 3 267 7.72E-79 T 11-10-2018 IPR032466 Metal-dependent hydrolase TVD_02045 9af0eeb153081d201feb4b70b82f44c6 273 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 193 209 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 TVD_01330 b566854cbc58e3c29dd7d1e9e5a158b8 275 ProSitePatterns PS01242 Zinc finger FPG-type signature. 243 269 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 TVD_01330 b566854cbc58e3c29dd7d1e9e5a158b8 275 SUPERFAMILY SSF81624 2 115 6.02E-13 T 11-10-2018 IPR035937 MutM-like, N-terminal TVD_01330 b566854cbc58e3c29dd7d1e9e5a158b8 275 SMART SM00898 2 116 6.2E-7 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 TVD_01330 b566854cbc58e3c29dd7d1e9e5a158b8 275 SMART SM01232 132 227 4.3E-12 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 TVD_01330 b566854cbc58e3c29dd7d1e9e5a158b8 275 SUPERFAMILY SSF46946 132 216 6.92E-17 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 TVD_01330 b566854cbc58e3c29dd7d1e9e5a158b8 275 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 133 217 8.3E-13 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 TVD_01330 b566854cbc58e3c29dd7d1e9e5a158b8 275 SUPERFAMILY SSF57716 229 270 1.25E-11 T 11-10-2018 TVD_01330 b566854cbc58e3c29dd7d1e9e5a158b8 275 Gene3D G3DSA:1.10.8.50 134 269 5.5E-34 T 11-10-2018 TVD_01330 b566854cbc58e3c29dd7d1e9e5a158b8 275 Gene3D G3DSA:3.20.190.10 2 127 1.9E-13 T 11-10-2018 IPR035937 MutM-like, N-terminal TVD_01330 b566854cbc58e3c29dd7d1e9e5a158b8 275 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 80 4.8E-6 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 TVD_01330 b566854cbc58e3c29dd7d1e9e5a158b8 275 Pfam PF06827 Zinc finger found in FPG and IleRS 240 271 2.3E-6 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 TVD_01850 461532002807c0fa485ba97fa81fef31 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site TVD_01850 461532002807c0fa485ba97fa81fef31 89 Gene3D G3DSA:3.30.1340.10 1 88 8.7E-34 T 11-10-2018 IPR035895 HPr-like superfamily TVD_01850 461532002807c0fa485ba97fa81fef31 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 7.5E-31 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like TVD_01850 461532002807c0fa485ba97fa81fef31 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.0E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like TVD_01850 461532002807c0fa485ba97fa81fef31 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.0E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like TVD_01850 461532002807c0fa485ba97fa81fef31 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.0E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like TVD_01850 461532002807c0fa485ba97fa81fef31 89 SUPERFAMILY SSF55594 1 88 4.71E-29 T 11-10-2018 IPR035895 HPr-like superfamily TVD_01850 461532002807c0fa485ba97fa81fef31 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 3.7E-29 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like TVD_07750 fcd9daf6b35d87fdf0d1a1948183b540 363 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 17 347 4.9E-122 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 TVD_07750 fcd9daf6b35d87fdf0d1a1948183b540 363 PIRSF PIRSF005508 4 363 6.4E-133 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 TVD_07750 fcd9daf6b35d87fdf0d1a1948183b540 363 Pfam PF01758 Sodium Bile acid symporter family 62 259 3.9E-52 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 TVD_07750 fcd9daf6b35d87fdf0d1a1948183b540 363 Gene3D G3DSA:1.20.1530.20 12 348 4.8E-25 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily TVD_11705 d8a6d7e4a87100e0ea02903612dfe43c 705 SUPERFAMILY SSF56935 23 705 4.58E-94 T 11-10-2018 TVD_11705 d8a6d7e4a87100e0ea02903612dfe43c 705 Pfam PF00593 TonB dependent receptor 234 702 2.6E-42 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TVD_11705 d8a6d7e4a87100e0ea02903612dfe43c 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 36 145 6.5E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TVD_11705 d8a6d7e4a87100e0ea02903612dfe43c 705 Gene3D G3DSA:2.170.130.10 35 152 3.1E-16 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TVD_11705 d8a6d7e4a87100e0ea02903612dfe43c 705 Gene3D G3DSA:2.40.170.20 166 705 7.9E-74 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TVD_10040 c5fd9b520c976b092d37718e34752d18 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 6.9E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_10040 c5fd9b520c976b092d37718e34752d18 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.9E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_10040 c5fd9b520c976b092d37718e34752d18 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 6.9E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_10040 c5fd9b520c976b092d37718e34752d18 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 6.9E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_10040 c5fd9b520c976b092d37718e34752d18 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 6.9E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_10040 c5fd9b520c976b092d37718e34752d18 284 Pfam PF00106 short chain dehydrogenase 8 190 2.3E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_10040 c5fd9b520c976b092d37718e34752d18 284 SUPERFAMILY SSF51735 7 269 7.09E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_10040 c5fd9b520c976b092d37718e34752d18 284 Gene3D G3DSA:3.40.50.720 6 260 1.4E-59 T 11-10-2018 TVD_10040 c5fd9b520c976b092d37718e34752d18 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TVD_10730 3b58ad7987cf891c7409d20677256421 317 Pfam PF14267 Domain of unknown function (DUF4357) 244 293 2.8E-18 T 11-10-2018 IPR025579 Domain of unknown function DUF4357 TVD_12640 999e19d5ebcee50c12b6234c65a120c5 316 Gene3D G3DSA:3.30.1490.20 138 202 3.6E-111 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TVD_12640 999e19d5ebcee50c12b6234c65a120c5 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 4 121 1.1E-42 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 TVD_12640 999e19d5ebcee50c12b6234c65a120c5 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 296 1.9E-71 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 TVD_12640 999e19d5ebcee50c12b6234c65a120c5 316 SUPERFAMILY SSF52440 4 122 5.47E-41 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TVD_12640 999e19d5ebcee50c12b6234c65a120c5 316 Gene3D G3DSA:3.30.470.20 116 296 3.6E-111 T 11-10-2018 TVD_12640 999e19d5ebcee50c12b6234c65a120c5 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 154.854 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 TVD_12640 999e19d5ebcee50c12b6234c65a120c5 316 Gene3D G3DSA:3.40.50.20 8 115 3.6E-111 T 11-10-2018 TVD_12640 999e19d5ebcee50c12b6234c65a120c5 316 SUPERFAMILY SSF56059 124 312 1.06E-55 T 11-10-2018 TVD_12640 999e19d5ebcee50c12b6234c65a120c5 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 4 310 2.0E-127 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 TVD_12850 2cfadb702c6f3c2f7bb942a0deca267e 244 SUPERFAMILY SSF46626 14 224 6.45E-26 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_12850 2cfadb702c6f3c2f7bb942a0deca267e 244 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 4 237 5.4E-97 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO TVD_12850 2cfadb702c6f3c2f7bb942a0deca267e 244 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 230 5.7E-93 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 Pfam PF13541 Subunit ChlI of Mg-chelatase 340 424 9.7E-7 T 11-10-2018 TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 Gene3D G3DSA:3.40.50.300 60 269 1.9E-41 T 11-10-2018 TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 445 1.1E-188 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 Hamap MF_01498 DNA repair protein RadA [radA]. 21 446 43.138 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 SMART SM00382 86 239 2.3E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 Pfam PF13481 AAA domain 79 216 8.0E-16 T 11-10-2018 TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 SUPERFAMILY SSF54211 249 448 1.74E-39 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 Gene3D G3DSA:3.30.230.10 286 448 2.2E-16 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 SUPERFAMILY SSF52540 63 285 1.23E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 PRINTS PR01874 DNA repair protein radA signature 207 235 1.4E-92 T 11-10-2018 TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 PRINTS PR01874 DNA repair protein radA signature 316 339 1.4E-92 T 11-10-2018 TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 PRINTS PR01874 DNA repair protein radA signature 168 192 1.4E-92 T 11-10-2018 TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 PRINTS PR01874 DNA repair protein radA signature 242 268 1.4E-92 T 11-10-2018 TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 PRINTS PR01874 DNA repair protein radA signature 10 34 1.4E-92 T 11-10-2018 TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 PRINTS PR01874 DNA repair protein radA signature 118 135 1.4E-92 T 11-10-2018 TVD_11800 3b15dd66f5ddfc05dceb60063b170810 448 PRINTS PR01874 DNA repair protein radA signature 78 106 1.4E-92 T 11-10-2018 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 587 26.438 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 Pfam PF05746 DALR anticodon binding domain 465 587 1.5E-36 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 Pfam PF00750 tRNA synthetases class I (R) 299 432 3.5E-13 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 Pfam PF00750 tRNA synthetases class I (R) 119 179 2.6E-10 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 SUPERFAMILY SSF52374 115 476 1.9E-90 T 11-10-2018 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 91 3.7E-22 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 334 355 1.1E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 159 172 1.1E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 135 1.1E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 135 151 1.1E-20 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 587 7.0E-130 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 SUPERFAMILY SSF47323 459 587 7.19E-35 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 Gene3D G3DSA:3.30.1360.70 1 107 2.5E-21 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 130 139 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 SMART SM01016 3 91 9.9E-34 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 SMART SM00836 465 587 1.2E-52 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 TVD_01590 37f51ff5294a90d68aa9eb235f519ca6 587 SUPERFAMILY SSF55190 2 111 1.44E-19 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 TVD_00875 844cf1ffc25cea0fa4e896c0cecac6d2 272 Pfam PF13649 Methyltransferase domain 65 162 1.2E-13 T 11-10-2018 TVD_00875 844cf1ffc25cea0fa4e896c0cecac6d2 272 Gene3D G3DSA:3.40.50.150 44 262 1.0E-58 T 11-10-2018 TVD_00875 844cf1ffc25cea0fa4e896c0cecac6d2 272 PIRSF PIRSF000385 21 266 4.2E-28 T 11-10-2018 IPR014369 Glycine/Sarcosine N-methyltransferase GO:0017174 Reactome: R-HSA-2408508|Reactome: R-HSA-389661 TVD_00875 844cf1ffc25cea0fa4e896c0cecac6d2 272 SUPERFAMILY SSF53335 21 264 1.01E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_00875 844cf1ffc25cea0fa4e896c0cecac6d2 272 Gene3D G3DSA:3.30.46.10 36 220 1.0E-58 T 11-10-2018 TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 24 242 1.0E-77 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 SUPERFAMILY SSF88659 163 245 8.97E-22 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 SUPERFAMILY SSF88946 21 96 7.33E-23 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 10 245 63.895 T 11-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 Gene3D G3DSA:1.10.1740.10 10 93 9.6E-28 T 11-10-2018 TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 Gene3D G3DSA:1.20.140.160 95 244 7.6E-42 T 11-10-2018 TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 Pfam PF04545 Sigma-70, region 4 191 240 1.7E-16 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 PRINTS PR00046 Major sigma-70 factor signature 227 238 7.0E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 PRINTS PR00046 Major sigma-70 factor signature 51 64 7.0E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 PRINTS PR00046 Major sigma-70 factor signature 212 227 7.0E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 PRINTS PR00046 Major sigma-70 factor signature 195 207 7.0E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 51 64 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 SUPERFAMILY SSF88659 98 164 3.49E-10 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 Pfam PF04539 Sigma-70 region 3 105 176 1.1E-5 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 PIRSF PIRSF000770 5 250 2.6E-36 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 241 4.1E-35 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TVD_06335 5d2956b6095ba0ed8ef6eda30bacf9ba 255 Pfam PF04542 Sigma-70 region 2 24 97 2.6E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TVD_06805 d7c276447fcf02e278e7aa76f3bfd21e 390 SMART SM00558 95 232 4.8E-4 T 11-10-2018 IPR003347 JmjC domain TVD_06805 d7c276447fcf02e278e7aa76f3bfd21e 390 SUPERFAMILY SSF51197 10 297 9.61E-60 T 11-10-2018 TVD_06805 d7c276447fcf02e278e7aa76f3bfd21e 390 Gene3D G3DSA:2.60.120.650 2 218 2.9E-77 T 11-10-2018 TVD_06805 d7c276447fcf02e278e7aa76f3bfd21e 390 Pfam PF08007 Cupin superfamily protein 18 301 4.1E-73 T 11-10-2018 IPR003347 JmjC domain TVD_06805 d7c276447fcf02e278e7aa76f3bfd21e 390 Gene3D G3DSA:1.10.10.2510 223 384 2.2E-16 T 11-10-2018 TVD_07125 fbc8a49b2ee9dc6c7f898cbec75052cb 282 PIRSF PIRSF006232 3 282 2.9E-80 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 TVD_07125 fbc8a49b2ee9dc6c7f898cbec75052cb 282 Pfam PF05726 Pirin C-terminal cupin domain 179 274 1.9E-23 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 TVD_07125 fbc8a49b2ee9dc6c7f898cbec75052cb 282 Pfam PF02678 Pirin 31 119 1.0E-31 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 TVD_07125 fbc8a49b2ee9dc6c7f898cbec75052cb 282 Gene3D G3DSA:2.60.120.10 141 244 9.8E-77 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TVD_07125 fbc8a49b2ee9dc6c7f898cbec75052cb 282 SUPERFAMILY SSF51182 10 278 3.01E-70 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TVD_07125 fbc8a49b2ee9dc6c7f898cbec75052cb 282 Gene3D G3DSA:2.60.120.10 17 270 9.8E-77 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TVD_10455 19b8e4e2b4fc6add0e467034f34be21e 606 Pfam PF00664 ABC transporter transmembrane region 41 309 5.4E-39 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TVD_10455 19b8e4e2b4fc6add0e467034f34be21e 606 Pfam PF00005 ABC transporter 371 520 1.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_10455 19b8e4e2b4fc6add0e467034f34be21e 606 SUPERFAMILY SSF90123 21 343 1.83E-63 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TVD_10455 19b8e4e2b4fc6add0e467034f34be21e 606 SMART SM00382 380 572 3.3E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_10455 19b8e4e2b4fc6add0e467034f34be21e 606 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_10455 19b8e4e2b4fc6add0e467034f34be21e 606 Gene3D G3DSA:3.40.50.300 345 603 6.8E-96 T 11-10-2018 TVD_10455 19b8e4e2b4fc6add0e467034f34be21e 606 Gene3D G3DSA:1.20.1560.10 26 344 1.6E-112 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TVD_10455 19b8e4e2b4fc6add0e467034f34be21e 606 SUPERFAMILY SSF52540 345 590 4.34E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01670 ed8b8137465483e4132ef5937711a9e3 130 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01670 ed8b8137465483e4132ef5937711a9e3 130 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 4.2E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01670 ed8b8137465483e4132ef5937711a9e3 130 Gene3D G3DSA:3.30.1300.30 37 128 5.0E-12 T 11-10-2018 TVD_01670 ed8b8137465483e4132ef5937711a9e3 130 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 6.6E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01670 ed8b8137465483e4132ef5937711a9e3 130 Pfam PF02501 Type II secretion system (T2SS), protein I 43 127 6.8E-17 T 11-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 TVD_01670 ed8b8137465483e4132ef5937711a9e3 130 TIGRFAM TIGR01707 gspI: type II secretion system protein I 9 92 9.8E-15 T 11-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 TVD_01670 ed8b8137465483e4132ef5937711a9e3 130 SUPERFAMILY SSF54523 41 127 1.46E-13 T 11-10-2018 TVD_07210 1f509cede8f435e5b88941ecf1158b4b 333 SUPERFAMILY SSF55347 147 280 4.8E-13 T 11-10-2018 TVD_07210 1f509cede8f435e5b88941ecf1158b4b 333 SUPERFAMILY SSF51735 3 161 6.9E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_07210 1f509cede8f435e5b88941ecf1158b4b 333 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 122 8.4E-30 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 TVD_07210 1f509cede8f435e5b88941ecf1158b4b 333 Gene3D G3DSA:3.30.360.10 123 304 6.6E-68 T 11-10-2018 TVD_07210 1f509cede8f435e5b88941ecf1158b4b 333 Gene3D G3DSA:3.40.50.720 7 292 6.6E-68 T 11-10-2018 TVD_06035 440436c72d9ef1a09ffdf8c091ee7202 712 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 503 624 4.9E-25 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_06035 440436c72d9ef1a09ffdf8c091ee7202 712 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 259 387 1.3E-11 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_06035 440436c72d9ef1a09ffdf8c091ee7202 712 SUPERFAMILY SSF52540 481 676 4.8E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06035 440436c72d9ef1a09ffdf8c091ee7202 712 SUPERFAMILY SSF52540 234 439 5.6E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06035 440436c72d9ef1a09ffdf8c091ee7202 712 Gene3D G3DSA:3.40.50.300 486 642 3.9E-35 T 11-10-2018 TVD_06035 440436c72d9ef1a09ffdf8c091ee7202 712 Gene3D G3DSA:3.40.50.300 232 407 2.4E-19 T 11-10-2018 TVD_06035 440436c72d9ef1a09ffdf8c091ee7202 712 SMART SM00382 255 391 4.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_06035 440436c72d9ef1a09ffdf8c091ee7202 712 SMART SM00382 499 628 2.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_01145 bbc1669c9e949c38d39e4c2654ef9179 405 SUPERFAMILY SSF52507 6 178 2.09E-57 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 TVD_01145 bbc1669c9e949c38d39e4c2654ef9179 405 Pfam PF02441 Flavoprotein 9 181 2.1E-45 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 TVD_01145 bbc1669c9e949c38d39e4c2654ef9179 405 Gene3D G3DSA:3.40.50.10300 183 404 1.8E-74 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 TVD_01145 bbc1669c9e949c38d39e4c2654ef9179 405 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 8 395 1.4E-130 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 TVD_01145 bbc1669c9e949c38d39e4c2654ef9179 405 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 369 9.6E-66 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 TVD_01145 bbc1669c9e949c38d39e4c2654ef9179 405 SUPERFAMILY SSF102645 185 400 3.14E-68 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 TVD_01145 bbc1669c9e949c38d39e4c2654ef9179 405 Gene3D G3DSA:3.40.50.1950 5 182 4.2E-55 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 TVD_01095 c532eb59c0128190eb0725962fd39793 399 Pfam PF00083 Sugar (and other) transporter 18 194 2.6E-6 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 TVD_01095 c532eb59c0128190eb0725962fd39793 399 SUPERFAMILY SSF103473 8 393 2.49E-38 T 11-10-2018 IPR036259 MFS transporter superfamily TVD_01095 c532eb59c0128190eb0725962fd39793 399 Pfam PF07690 Major Facilitator Superfamily 220 393 8.5E-12 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TVD_01095 c532eb59c0128190eb0725962fd39793 399 Gene3D G3DSA:1.20.1250.20 4 391 2.9E-35 T 11-10-2018 TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 SMART SM00267 256 424 8.0E-56 T 11-10-2018 IPR000160 GGDEF domain TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 SMART SM00086 90 134 1.8E-7 T 11-10-2018 IPR001610 PAC motif TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 SMART SM00086 214 256 1.2E-6 T 11-10-2018 IPR001610 PAC motif TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 SUPERFAMILY SSF55785 148 254 4.54E-31 T 11-10-2018 IPR035965 PAS domain superfamily TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 Gene3D G3DSA:3.30.450.20 146 268 3.6E-40 T 11-10-2018 TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 Pfam PF13426 PAS domain 153 255 8.7E-20 T 11-10-2018 IPR000014 PAS domain TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 Pfam PF13426 PAS domain 26 133 1.2E-17 T 11-10-2018 IPR000014 PAS domain TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 SUPERFAMILY SSF55073 272 423 3.69E-45 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 Pfam PF00990 Diguanylate cyclase, GGDEF domain 267 420 8.6E-44 T 11-10-2018 IPR000160 GGDEF domain TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 265 422 3.4E-46 T 11-10-2018 IPR000160 GGDEF domain TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 Gene3D G3DSA:3.30.70.270 269 423 1.9E-52 T 11-10-2018 TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 SMART SM00091 14 84 1.3E-4 T 11-10-2018 IPR000014 PAS domain TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 SMART SM00091 142 208 1.8E-10 T 11-10-2018 IPR000014 PAS domain TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 139 4.7E-17 T 11-10-2018 IPR000014 PAS domain TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 262 5.4E-24 T 11-10-2018 IPR000014 PAS domain TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 SUPERFAMILY SSF55785 24 133 3.07E-26 T 11-10-2018 IPR035965 PAS domain superfamily TVD_05810 a8dce2924bf39a6ab9cdcd7ad0cb71cf 424 Gene3D G3DSA:3.30.450.20 10 145 2.6E-43 T 11-10-2018 TVD_02035 e7d50cd3cf3294cf52d9c35c3a8e3ae5 333 SUPERFAMILY SSF46626 45 166 1.32E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_02035 e7d50cd3cf3294cf52d9c35c3a8e3ae5 333 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 188 268 2.1E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_02035 e7d50cd3cf3294cf52d9c35c3a8e3ae5 333 Gene3D G3DSA:1.10.760.10 47 170 1.6E-33 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_02035 e7d50cd3cf3294cf52d9c35c3a8e3ae5 333 SUPERFAMILY SSF46626 179 280 2.96E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_02035 e7d50cd3cf3294cf52d9c35c3a8e3ae5 333 Gene3D G3DSA:1.10.760.10 179 292 8.0E-43 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_06320 b49a3f84dbb438df2c063056f52f2db0 700 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 18 690 1.7E-264 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 TVD_06320 b49a3f84dbb438df2c063056f52f2db0 700 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 140 163 - T 11-10-2018 IPR025505 FHIPEP conserved site TVD_06320 b49a3f84dbb438df2c063056f52f2db0 700 PIRSF PIRSF005419 11 696 3.5E-246 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TVD_06320 b49a3f84dbb438df2c063056f52f2db0 700 Gene3D G3DSA:3.40.30.60 359 501 4.1E-51 T 11-10-2018 TVD_06320 b49a3f84dbb438df2c063056f52f2db0 700 Gene3D G3DSA:1.10.8.540 502 589 6.2E-25 T 11-10-2018 TVD_06320 b49a3f84dbb438df2c063056f52f2db0 700 Gene3D G3DSA:1.10.490.80 593 690 3.7E-11 T 11-10-2018 TVD_06320 b49a3f84dbb438df2c063056f52f2db0 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 235 249 1.4E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TVD_06320 b49a3f84dbb438df2c063056f52f2db0 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 68 87 1.4E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TVD_06320 b49a3f84dbb438df2c063056f52f2db0 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 184 201 1.4E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TVD_06320 b49a3f84dbb438df2c063056f52f2db0 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 31 44 1.4E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TVD_06320 b49a3f84dbb438df2c063056f52f2db0 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 135 151 1.4E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TVD_06320 b49a3f84dbb438df2c063056f52f2db0 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 154 172 1.4E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TVD_06320 b49a3f84dbb438df2c063056f52f2db0 700 Pfam PF00771 FHIPEP family 25 681 1.5E-267 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TVD_04350 ad4c1e23d240661993040e5163ff2262 442 Gene3D G3DSA:3.40.50.150 80 436 5.1E-106 T 11-10-2018 TVD_04350 ad4c1e23d240661993040e5163ff2262 442 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 18 434 1.7E-92 T 11-10-2018 TVD_04350 ad4c1e23d240661993040e5163ff2262 442 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 372 402 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site TVD_04350 ad4c1e23d240661993040e5163ff2262 442 Gene3D G3DSA:3.40.1350.30 127 269 5.1E-106 T 11-10-2018 TVD_04350 ad4c1e23d240661993040e5163ff2262 442 SUPERFAMILY SSF50249 9 66 2.8E-9 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_04350 ad4c1e23d240661993040e5163ff2262 442 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 266 438 6.1E-25 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 TVD_04350 ad4c1e23d240661993040e5163ff2262 442 Gene3D G3DSA:2.40.50.140 2 79 1.7E-19 T 11-10-2018 TVD_04350 ad4c1e23d240661993040e5163ff2262 442 SUPERFAMILY SSF53335 68 441 1.34E-74 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_04350 ad4c1e23d240661993040e5163ff2262 442 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 10 442 63.899 T 11-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 TVD_04350 ad4c1e23d240661993040e5163ff2262 442 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 424 434 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site TVD_11440 249e2f2361e98909b24da477ea6c8a86 86 Gene3D G3DSA:2.30.30.100 1 81 3.2E-32 T 11-10-2018 TVD_11440 249e2f2361e98909b24da477ea6c8a86 86 SUPERFAMILY SSF50182 7 69 8.29E-24 T 11-10-2018 IPR010920 LSM domain superfamily TVD_11440 249e2f2361e98909b24da477ea6c8a86 86 Pfam PF17209 Hfq protein 7 68 1.3E-30 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 TVD_11440 249e2f2361e98909b24da477ea6c8a86 86 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 64 27.638 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 TVD_11440 249e2f2361e98909b24da477ea6c8a86 86 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 64 3.0E-29 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 TVD_02430 04829a8633a44252eaa44f1e3ef23a5d 130 Gene3D G3DSA:3.30.1370.30 1 72 4.4E-26 T 11-10-2018 TVD_02430 04829a8633a44252eaa44f1e3ef23a5d 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 130 30.001 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02430 04829a8633a44252eaa44f1e3ef23a5d 130 SUPERFAMILY SSF56047 1 130 2.62E-43 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02430 04829a8633a44252eaa44f1e3ef23a5d 130 Gene3D G3DSA:3.30.1490.10 74 130 3.5E-22 T 11-10-2018 TVD_02430 04829a8633a44252eaa44f1e3ef23a5d 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02430 04829a8633a44252eaa44f1e3ef23a5d 130 Pfam PF00410 Ribosomal protein S8 4 130 1.5E-45 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_01230 64c9a86e24ed23eb38be6d29934410ef 146 Pfam PF01220 Dehydroquinase class II 3 140 4.7E-57 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TVD_01230 64c9a86e24ed23eb38be6d29934410ef 146 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 146 67.953 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TVD_01230 64c9a86e24ed23eb38be6d29934410ef 146 SUPERFAMILY SSF52304 3 145 3.27E-58 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TVD_01230 64c9a86e24ed23eb38be6d29934410ef 146 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TVD_01230 64c9a86e24ed23eb38be6d29934410ef 146 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 134 1.0E-36 T 11-10-2018 TVD_01230 64c9a86e24ed23eb38be6d29934410ef 146 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 141 7.4E-57 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TVD_01230 64c9a86e24ed23eb38be6d29934410ef 146 PIRSF PIRSF001399 1 146 7.7E-56 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TVD_01230 64c9a86e24ed23eb38be6d29934410ef 146 Gene3D G3DSA:3.40.50.9100 1 146 2.5E-62 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TVD_02970 63dca7a78a1494dfe8b47b7c20132c09 397 Gene3D G3DSA:2.40.30.170 44 323 1.8E-54 T 11-10-2018 TVD_02970 63dca7a78a1494dfe8b47b7c20132c09 397 Gene3D G3DSA:2.40.50.100 55 238 1.8E-54 T 11-10-2018 TVD_02970 63dca7a78a1494dfe8b47b7c20132c09 397 Gene3D G3DSA:1.10.287.470 89 191 1.8E-54 T 11-10-2018 TVD_02970 63dca7a78a1494dfe8b47b7c20132c09 397 Pfam PF13437 HlyD family secretion protein 204 303 3.5E-8 T 11-10-2018 TVD_02970 63dca7a78a1494dfe8b47b7c20132c09 397 Gene3D G3DSA:2.40.420.20 40 381 1.8E-54 T 11-10-2018 TVD_02970 63dca7a78a1494dfe8b47b7c20132c09 397 Pfam PF02321 Outer membrane efflux protein 98 181 6.0E-5 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_02970 63dca7a78a1494dfe8b47b7c20132c09 397 SUPERFAMILY SSF111369 46 186 2.62E-10 T 11-10-2018 TVD_07275 9579004cee3bf531d75aa2bd40652e0b 245 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.943 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 TVD_07275 9579004cee3bf531d75aa2bd40652e0b 245 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 10 240 9.7E-99 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 TVD_07275 9579004cee3bf531d75aa2bd40652e0b 245 PIRSF PIRSF005650 4 245 2.4E-92 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 TVD_07275 9579004cee3bf531d75aa2bd40652e0b 245 Gene3D G3DSA:3.40.1160.10 2 243 4.0E-77 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TVD_07275 9579004cee3bf531d75aa2bd40652e0b 245 SUPERFAMILY SSF53633 8 239 2.49E-71 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TVD_07275 9579004cee3bf531d75aa2bd40652e0b 245 Pfam PF00696 Amino acid kinase family 11 219 1.4E-25 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TVD_03175 5ce128dbe75088f89ada45566e0ba0e8 469 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 4 463 27.269 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 TVD_03175 5ce128dbe75088f89ada45566e0ba0e8 469 Pfam PF13742 OB-fold nucleic acid binding domain 7 98 1.6E-23 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 TVD_03175 5ce128dbe75088f89ada45566e0ba0e8 469 Pfam PF02601 Exonuclease VII, large subunit 122 459 2.5E-93 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 TVD_03175 5ce128dbe75088f89ada45566e0ba0e8 469 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 8 354 1.2E-124 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 TVD_13045 b08b170c48785b982fcf2094a0d1522c 390 Pfam PF01578 Cytochrome C assembly protein 175 385 3.9E-51 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 TVD_13045 b08b170c48785b982fcf2094a0d1522c 390 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 146 388 4.9E-75 T 11-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 TVD_06825 5fa3150f070cfdcacac9a707f347a39d 325 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_06825 5fa3150f070cfdcacac9a707f347a39d 325 Gene3D G3DSA:3.40.50.300 1 238 1.2E-66 T 11-10-2018 TVD_06825 5fa3150f070cfdcacac9a707f347a39d 325 Pfam PF00005 ABC transporter 21 165 2.2E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_06825 5fa3150f070cfdcacac9a707f347a39d 325 SUPERFAMILY SSF52540 3 233 7.0E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06825 5fa3150f070cfdcacac9a707f347a39d 325 SMART SM00382 30 229 1.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_08680 76fa2f15bc4fcab976f87789f60e57e4 594 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 522 5.1E-132 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TVD_08680 76fa2f15bc4fcab976f87789f60e57e4 594 PIRSF PIRSF001589 1 594 7.1E-191 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TVD_08680 76fa2f15bc4fcab976f87789f60e57e4 594 SUPERFAMILY SSF56235 1 225 3.35E-63 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_08680 76fa2f15bc4fcab976f87789f60e57e4 594 Pfam PF13537 Glutamine amidotransferase domain 47 167 5.3E-43 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TVD_08680 76fa2f15bc4fcab976f87789f60e57e4 594 TIGRFAM TIGR03104 trio_amidotrans: asparagine synthase family amidotransferase 1 591 3.6E-275 T 11-10-2018 IPR017535 Asparagine synthase family amidotransferase TVD_08680 76fa2f15bc4fcab976f87789f60e57e4 594 Gene3D G3DSA:3.60.20.10 7 185 4.5E-59 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_08680 76fa2f15bc4fcab976f87789f60e57e4 594 SUPERFAMILY SSF52402 234 566 1.76E-72 T 11-10-2018 TVD_08680 76fa2f15bc4fcab976f87789f60e57e4 594 Pfam PF00733 Asparagine synthase 243 589 8.9E-87 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TVD_03785 80a1d938a6be834e940be2ed6cc3a0ee 429 Pfam PF00578 AhpC/TSA family 293 404 3.1E-24 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TVD_03785 80a1d938a6be834e940be2ed6cc3a0ee 429 SUPERFAMILY SSF52833 291 427 1.02E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_03785 80a1d938a6be834e940be2ed6cc3a0ee 429 ProSitePatterns PS00194 Thioredoxin family active site. 317 335 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TVD_03785 80a1d938a6be834e940be2ed6cc3a0ee 429 Gene3D G3DSA:3.40.30.10 266 428 2.5E-40 T 11-10-2018 TVD_02090 c9a743a72ac65289dc21801e62f36a08 200 Gene3D G3DSA:2.102.10.10 43 192 7.3E-46 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TVD_02090 c9a743a72ac65289dc21801e62f36a08 200 Pfam PF00355 Rieske [2Fe-2S] domain 57 176 3.3E-9 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TVD_02090 c9a743a72ac65289dc21801e62f36a08 200 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 192 9.1E-66 T 11-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 TVD_02090 c9a743a72ac65289dc21801e62f36a08 200 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 2 40 1.3E-11 T 11-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 TVD_02090 c9a743a72ac65289dc21801e62f36a08 200 PRINTS PR00162 Rieske 2Fe-2S subunit signature 120 131 2.2E-5 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 TVD_02090 c9a743a72ac65289dc21801e62f36a08 200 PRINTS PR00162 Rieske 2Fe-2S subunit signature 151 163 2.2E-5 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 TVD_02090 c9a743a72ac65289dc21801e62f36a08 200 SUPERFAMILY SSF50022 31 197 1.52E-39 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TVD_07230 585c16eb6b6cc5c9f50aab1c3a03e6d9 152 Pfam PF07977 FabA-like domain 13 141 8.8E-40 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TVD_07230 585c16eb6b6cc5c9f50aab1c3a03e6d9 152 Gene3D G3DSA:3.10.129.10 2 150 1.1E-57 T 11-10-2018 TVD_07230 585c16eb6b6cc5c9f50aab1c3a03e6d9 152 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 4 149 33.806 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TVD_07230 585c16eb6b6cc5c9f50aab1c3a03e6d9 152 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 5 146 7.0E-57 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TVD_07230 585c16eb6b6cc5c9f50aab1c3a03e6d9 152 SUPERFAMILY SSF54637 6 147 2.3E-46 T 11-10-2018 IPR029069 HotDog domain superfamily TVD_11060 666ee3a0d62c15bf57defd450fb6c289 625 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 612 8.0E-223 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TVD_11060 666ee3a0d62c15bf57defd450fb6c289 625 Gene3D G3DSA:3.40.710.10 245 616 4.4E-98 T 11-10-2018 TVD_11060 666ee3a0d62c15bf57defd450fb6c289 625 Gene3D G3DSA:3.90.1310.10 64 244 1.6E-48 T 11-10-2018 TVD_11060 666ee3a0d62c15bf57defd450fb6c289 625 SUPERFAMILY SSF56519 56 249 8.5E-53 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 TVD_11060 666ee3a0d62c15bf57defd450fb6c289 625 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 608 3.6E-69 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TVD_11060 666ee3a0d62c15bf57defd450fb6c289 625 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 235 1.9E-45 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 TVD_11060 666ee3a0d62c15bf57defd450fb6c289 625 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 3 615 49.145 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TVD_11060 666ee3a0d62c15bf57defd450fb6c289 625 Gene3D G3DSA:3.30.1390.30 85 160 1.6E-48 T 11-10-2018 TVD_11060 666ee3a0d62c15bf57defd450fb6c289 625 SUPERFAMILY SSF56601 250 611 1.77E-96 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TVD_12365 eae3107720222497c951ae7b94aa2d41 617 SUPERFAMILY SSF52016 422 612 5.02E-59 T 11-10-2018 TVD_12365 eae3107720222497c951ae7b94aa2d41 617 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TVD_12365 eae3107720222497c951ae7b94aa2d41 617 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 510 521 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TVD_12365 eae3107720222497c951ae7b94aa2d41 617 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 611 45.282 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TVD_12365 eae3107720222497c951ae7b94aa2d41 617 SUPERFAMILY SSF143975 4 421 3.53E-135 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TVD_12365 eae3107720222497c951ae7b94aa2d41 617 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 611 2.5E-251 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TVD_12365 eae3107720222497c951ae7b94aa2d41 617 Pfam PF00920 Dehydratase family 34 608 1.3E-220 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 TVD_12365 eae3107720222497c951ae7b94aa2d41 617 Gene3D G3DSA:3.50.30.80 422 573 9.1E-54 T 11-10-2018 TVD_02870 f1ab555434ddc7e3a7c18c07213aa961 397 SUPERFAMILY SSF55073 250 394 8.63E-38 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_02870 f1ab555434ddc7e3a7c18c07213aa961 397 Pfam PF00990 Diguanylate cyclase, GGDEF domain 245 394 8.4E-36 T 11-10-2018 IPR000160 GGDEF domain TVD_02870 f1ab555434ddc7e3a7c18c07213aa961 397 Gene3D G3DSA:3.30.70.270 230 397 6.0E-48 T 11-10-2018 TVD_02870 f1ab555434ddc7e3a7c18c07213aa961 397 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 241 393 6.8E-34 T 11-10-2018 IPR000160 GGDEF domain TVD_02870 f1ab555434ddc7e3a7c18c07213aa961 397 SMART SM00267 234 397 1.4E-45 T 11-10-2018 IPR000160 GGDEF domain TVD_13795 9e749ca61aa4593fc4e922f343f8e0a3 407 Gene3D G3DSA:3.30.70.1350 229 318 5.2E-20 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 TVD_13795 9e749ca61aa4593fc4e922f343f8e0a3 407 Pfam PF16916 Dimerisation domain of Zinc Transporter 234 311 1.1E-22 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain TVD_13795 9e749ca61aa4593fc4e922f343f8e0a3 407 Gene3D G3DSA:1.20.1510.10 31 228 2.6E-60 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TVD_13795 9e749ca61aa4593fc4e922f343f8e0a3 407 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 32 312 9.4E-73 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TVD_13795 9e749ca61aa4593fc4e922f343f8e0a3 407 SUPERFAMILY SSF160240 233 312 4.84E-20 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 TVD_13795 9e749ca61aa4593fc4e922f343f8e0a3 407 Pfam PF01545 Cation efflux family 36 228 1.1E-42 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TVD_13795 9e749ca61aa4593fc4e922f343f8e0a3 407 SUPERFAMILY SSF161111 28 230 1.96E-52 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily TVD_05575 3be17e56bfcd6f8b5b739b2995ac7fb8 382 Gene3D G3DSA:3.30.750.24 16 111 4.1E-9 T 11-10-2018 IPR036513 STAS domain superfamily TVD_05575 3be17e56bfcd6f8b5b739b2995ac7fb8 382 Pfam PF02405 Permease MlaE 169 375 2.7E-69 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 TVD_05575 3be17e56bfcd6f8b5b739b2995ac7fb8 382 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 168 379 4.5E-65 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria TVD_05575 3be17e56bfcd6f8b5b739b2995ac7fb8 382 SUPERFAMILY SSF52091 21 105 1.12E-9 T 11-10-2018 IPR036513 STAS domain superfamily TVD_05575 3be17e56bfcd6f8b5b739b2995ac7fb8 382 Pfam PF13466 STAS domain 24 103 3.2E-10 T 11-10-2018 IPR002645 STAS domain TVD_09345 1931ace51d93bba2dac92116fef81ab4 301 Gene3D G3DSA:3.40.50.1820 19 301 4.7E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_09345 1931ace51d93bba2dac92116fef81ab4 301 Pfam PF12697 Alpha/beta hydrolase family 53 282 8.4E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TVD_09345 1931ace51d93bba2dac92116fef81ab4 301 SUPERFAMILY SSF53474 14 300 2.22E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_01750 077872dd9150a6fd4d7990341d864b36 593 SUPERFAMILY SSF117023 460 586 1.57E-14 T 11-10-2018 TVD_01750 077872dd9150a6fd4d7990341d864b36 593 SUPERFAMILY SSF56731 113 416 2.09E-94 T 11-10-2018 TVD_01750 077872dd9150a6fd4d7990341d864b36 593 Hamap MF_00974 DNA primase [dnaG]. 4 584 27.124 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 TVD_01750 077872dd9150a6fd4d7990341d864b36 593 Gene3D G3DSA:1.10.860.10 459 590 1.4E-14 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal TVD_01750 077872dd9150a6fd4d7990341d864b36 593 TIGRFAM TIGR01391 dnaG: DNA primase 5 409 1.7E-134 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 TVD_01750 077872dd9150a6fd4d7990341d864b36 593 Pfam PF01807 CHC2 zinc finger 6 100 5.7E-40 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 TVD_01750 077872dd9150a6fd4d7990341d864b36 593 Gene3D G3DSA:3.90.980.10 109 232 2.4E-35 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily TVD_01750 077872dd9150a6fd4d7990341d864b36 593 Pfam PF13662 Toprim domain 252 315 1.4E-15 T 11-10-2018 IPR006171 TOPRIM domain TVD_01750 077872dd9150a6fd4d7990341d864b36 593 Gene3D G3DSA:3.90.580.10 1 101 5.6E-41 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 TVD_01750 077872dd9150a6fd4d7990341d864b36 593 Pfam PF08278 DNA primase DnaG DnaB-binding 463 582 6.8E-12 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 TVD_01750 077872dd9150a6fd4d7990341d864b36 593 SMART SM00400 36 90 1.4E-34 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 TVD_01750 077872dd9150a6fd4d7990341d864b36 593 Pfam PF10410 DnaB-helicase binding domain of primase 364 416 8.3E-11 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 TVD_01750 077872dd9150a6fd4d7990341d864b36 593 Pfam PF08275 DNA primase catalytic core, N-terminal domain 123 243 4.9E-35 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal TVD_01750 077872dd9150a6fd4d7990341d864b36 593 PIRSF PIRSF002811 2 590 5.8E-136 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 TVD_01750 077872dd9150a6fd4d7990341d864b36 593 SUPERFAMILY SSF57783 4 100 3.06E-38 T 11-10-2018 TVD_01750 077872dd9150a6fd4d7990341d864b36 593 Gene3D G3DSA:3.40.1360.10 233 359 7.1E-38 T 11-10-2018 TVD_01750 077872dd9150a6fd4d7990341d864b36 593 SMART SM00766 459 583 0.0053 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 TVD_01750 077872dd9150a6fd4d7990341d864b36 593 SMART SM00493 251 322 9.1E-16 T 11-10-2018 IPR006171 TOPRIM domain TVD_03310 7f6d002e33661ca68a82622b99534e83 283 SMART SM00471 116 247 6.9E-4 T 11-10-2018 IPR003607 HD/PDEase domain TVD_03310 7f6d002e33661ca68a82622b99534e83 283 SUPERFAMILY SSF109604 10 238 3.38E-53 T 11-10-2018 TVD_03310 7f6d002e33661ca68a82622b99534e83 283 TIGRFAM TIGR00277 HDIG: HDIG domain 119 211 3.7E-10 T 11-10-2018 IPR006675 HDIG domain TVD_03310 7f6d002e33661ca68a82622b99534e83 283 Gene3D G3DSA:1.10.3210.10 4 268 9.8E-63 T 11-10-2018 TVD_03310 7f6d002e33661ca68a82622b99534e83 283 Pfam PF08668 HDOD domain 25 211 7.1E-45 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD TVD_08270 8e56ccdd4b1d3057a06fbbe2a6b93f2b 242 Pfam PF11784 Protein of unknown function (DUF3320) 66 114 5.1E-17 T 11-10-2018 IPR021754 Protein of unknown function DUF3320 TVD_02680 7fc406133323a70dc73763ad8d64b766 547 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 219 530 1.4E-32 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TVD_02680 7fc406133323a70dc73763ad8d64b766 547 Gene3D G3DSA:2.40.420.20 215 526 6.4E-50 T 11-10-2018 TVD_02680 7fc406133323a70dc73763ad8d64b766 547 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 225 413 4.6E-11 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TVD_02680 7fc406133323a70dc73763ad8d64b766 547 Gene3D G3DSA:2.40.30.170 227 466 6.4E-50 T 11-10-2018 TVD_02680 7fc406133323a70dc73763ad8d64b766 547 Gene3D G3DSA:2.40.50.100 241 385 6.4E-50 T 11-10-2018 TVD_02680 7fc406133323a70dc73763ad8d64b766 547 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 69 - T 11-10-2018 IPR010916 TonB box, conserved site TVD_02680 7fc406133323a70dc73763ad8d64b766 547 SUPERFAMILY SSF111369 259 465 7.98E-9 T 11-10-2018 TVD_02680 7fc406133323a70dc73763ad8d64b766 547 Gene3D G3DSA:1.10.287.470 281 349 6.4E-50 T 11-10-2018 TVD_07520 a66e516a6a1729119d3dcece3eebd4ed 351 Pfam PF00107 Zinc-binding dehydrogenase 180 282 5.5E-30 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TVD_07520 a66e516a6a1729119d3dcece3eebd4ed 351 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 TVD_07520 a66e516a6a1729119d3dcece3eebd4ed 351 Gene3D G3DSA:3.40.50.720 165 293 8.0E-111 T 11-10-2018 TVD_07520 a66e516a6a1729119d3dcece3eebd4ed 351 SUPERFAMILY SSF50129 3 164 1.22E-51 T 11-10-2018 IPR011032 GroES-like superfamily TVD_07520 a66e516a6a1729119d3dcece3eebd4ed 351 SMART SM00829 13 345 3.2E-7 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TVD_07520 a66e516a6a1729119d3dcece3eebd4ed 351 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 133 4.0E-28 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TVD_07520 a66e516a6a1729119d3dcece3eebd4ed 351 Gene3D G3DSA:3.90.180.10 23 337 8.0E-111 T 11-10-2018 TVD_07520 a66e516a6a1729119d3dcece3eebd4ed 351 SUPERFAMILY SSF51735 143 315 1.97E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_12325 dbff31b36db3fa1bec600cdf53c601df 188 Pfam PF00578 AhpC/TSA family 51 167 2.2E-24 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TVD_12325 dbff31b36db3fa1bec600cdf53c601df 188 ProSitePatterns PS00194 Thioredoxin family active site. 78 96 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TVD_12325 dbff31b36db3fa1bec600cdf53c601df 188 Gene3D G3DSA:3.40.30.10 28 188 3.2E-38 T 11-10-2018 TVD_12325 dbff31b36db3fa1bec600cdf53c601df 188 SUPERFAMILY SSF52833 40 188 2.7E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_04005 68a7f7d6eb210f290e6560cca988d7b9 624 Pfam PF00027 Cyclic nucleotide-binding domain 36 123 3.9E-7 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TVD_04005 68a7f7d6eb210f290e6560cca988d7b9 624 Gene3D G3DSA:2.60.120.10 7 154 8.7E-12 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TVD_04005 68a7f7d6eb210f290e6560cca988d7b9 624 Pfam PF03445 Putative nucleotidyltransferase DUF294 307 447 1.2E-41 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 TVD_04005 68a7f7d6eb210f290e6560cca988d7b9 624 Gene3D G3DSA:3.10.580.10 161 287 1.7E-31 T 11-10-2018 TVD_04005 68a7f7d6eb210f290e6560cca988d7b9 624 Pfam PF00571 CBS domain 169 218 1.2E-11 T 11-10-2018 IPR000644 CBS domain TVD_04005 68a7f7d6eb210f290e6560cca988d7b9 624 Pfam PF00571 CBS domain 229 280 7.9E-8 T 11-10-2018 IPR000644 CBS domain TVD_04005 68a7f7d6eb210f290e6560cca988d7b9 624 SUPERFAMILY SSF51206 10 150 1.57E-14 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like TVD_04005 68a7f7d6eb210f290e6560cca988d7b9 624 SMART SM00116 236 283 0.023 T 11-10-2018 IPR000644 CBS domain TVD_04005 68a7f7d6eb210f290e6560cca988d7b9 624 SMART SM00116 171 219 1.8E-10 T 11-10-2018 IPR000644 CBS domain TVD_04005 68a7f7d6eb210f290e6560cca988d7b9 624 SUPERFAMILY SSF54631 170 280 3.03E-27 T 11-10-2018 TVD_04005 68a7f7d6eb210f290e6560cca988d7b9 624 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 484 622 6.1E-40 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 Gene3D G3DSA:3.40.50.1000 507 770 1.3E-69 T 11-10-2018 IPR023214 HAD superfamily TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 264 820 9.5E-160 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 18 101 1.8E-23 T 11-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 Pfam PF00403 Heavy-metal-associated domain 113 173 1.4E-9 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 Pfam PF00122 E1-E2 ATPase 327 505 1.4E-45 T 11-10-2018 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 SUPERFAMILY SSF81653 338 426 3.4E-22 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 SUPERFAMILY SSF55008 107 180 6.41E-19 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 299 801 5.2E-68 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 Pfam PF00702 haloacid dehalogenase-like hydrolase 523 732 1.6E-31 T 11-10-2018 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 528 534 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 SUPERFAMILY SSF56784 524 818 1.7E-47 T 11-10-2018 IPR036412 HAD-like superfamily TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 247 821 9.0E-148 T 11-10-2018 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 SUPERFAMILY SSF81665 274 795 4.05E-11 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 377 391 1.3E-20 T 11-10-2018 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 665 675 1.3E-20 T 11-10-2018 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 643 654 1.3E-20 T 11-10-2018 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 741 753 1.3E-20 T 11-10-2018 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 718 737 1.3E-20 T 11-10-2018 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 526 540 1.3E-20 T 11-10-2018 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 Gene3D G3DSA:3.40.1110.10 537 650 1.3E-69 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 Gene3D G3DSA:3.30.70.100 107 175 1.0E-15 T 11-10-2018 TVD_12825 e9d2ecdf612351590ad41cb8e50d7870 851 Gene3D G3DSA:2.70.150.20 320 432 6.8E-32 T 11-10-2018 TVD_13315 8a887b736eceda097d57957fd823fe10 769 Gene3D G3DSA:3.30.420.360 393 758 1.7E-108 T 11-10-2018 TVD_13315 8a887b736eceda097d57957fd823fe10 769 Gene3D G3DSA:3.90.870.50 16 370 6.8E-130 T 11-10-2018 TVD_13315 8a887b736eceda097d57957fd823fe10 769 Pfam PF00708 Acylphosphatase 15 96 2.2E-20 T 11-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TVD_13315 8a887b736eceda097d57957fd823fe10 769 SUPERFAMILY SSF55821 182 398 1.62E-47 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TVD_13315 8a887b736eceda097d57957fd823fe10 769 Gene3D G3DSA:3.30.110.120 261 379 6.8E-130 T 11-10-2018 TVD_13315 8a887b736eceda097d57957fd823fe10 769 Pfam PF01300 Telomere recombination 218 392 9.7E-49 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 TVD_13315 8a887b736eceda097d57957fd823fe10 769 Gene3D G3DSA:3.30.420.350 490 745 1.7E-108 T 11-10-2018 TVD_13315 8a887b736eceda097d57957fd823fe10 769 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 18 758 9.9E-202 T 11-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 TVD_13315 8a887b736eceda097d57957fd823fe10 769 ProSitePatterns PS00150 Acylphosphatase signature 1. 18 28 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TVD_13315 8a887b736eceda097d57957fd823fe10 769 PIRSF PIRSF006256 10 765 4.7E-243 T 11-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 TVD_13315 8a887b736eceda097d57957fd823fe10 769 SUPERFAMILY SSF54975 11 97 7.41E-23 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TVD_13315 8a887b736eceda097d57957fd823fe10 769 Pfam PF07503 HypF finger 116 147 2.0E-13 T 11-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 TVD_13315 8a887b736eceda097d57957fd823fe10 769 Pfam PF07503 HypF finger 165 197 1.8E-13 T 11-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 TVD_06060 83f958a3cec3f8a0877c7663ec6d9fba 815 Pfam PF02384 N-6 DNA Methylase 131 441 2.7E-100 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TVD_06060 83f958a3cec3f8a0877c7663ec6d9fba 815 Pfam PF12161 HsdM N-terminal domain 8 118 9.2E-17 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain TVD_06060 83f958a3cec3f8a0877c7663ec6d9fba 815 Gene3D G3DSA:3.40.50.150 131 424 3.3E-89 T 11-10-2018 TVD_06060 83f958a3cec3f8a0877c7663ec6d9fba 815 Gene3D G3DSA:1.20.1260.30 1 59 5.4E-17 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily TVD_06060 83f958a3cec3f8a0877c7663ec6d9fba 815 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 67 446 4.8E-73 T 11-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 TVD_06060 83f958a3cec3f8a0877c7663ec6d9fba 815 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 254 266 2.3E-20 T 11-10-2018 TVD_06060 83f958a3cec3f8a0877c7663ec6d9fba 815 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 154 170 2.3E-20 T 11-10-2018 TVD_06060 83f958a3cec3f8a0877c7663ec6d9fba 815 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 182 196 2.3E-20 T 11-10-2018 TVD_06060 83f958a3cec3f8a0877c7663ec6d9fba 815 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 291 315 2.3E-20 T 11-10-2018 TVD_06060 83f958a3cec3f8a0877c7663ec6d9fba 815 SUPERFAMILY SSF53335 6 479 3.33E-122 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_12250 98bedb644f624362438418bb13759c00 345 Gene3D G3DSA:3.40.190.10 34 308 4.9E-130 T 11-10-2018 TVD_12250 98bedb644f624362438418bb13759c00 345 SUPERFAMILY SSF53850 32 341 7.56E-80 T 11-10-2018 TVD_12250 98bedb644f624362438418bb13759c00 345 Pfam PF13343 Bacterial extracellular solute-binding protein 79 304 1.0E-20 T 11-10-2018 TVD_12250 98bedb644f624362438418bb13759c00 345 Gene3D G3DSA:3.40.190.10 132 342 4.9E-130 T 11-10-2018 TVD_12250 98bedb644f624362438418bb13759c00 345 PIRSF PIRSF002825 2 345 5.5E-90 T 11-10-2018 IPR026045 Ferric binding protein TVD_06840 4e03f723b5140655aa9256bf1b65e015 614 Gene3D G3DSA:3.50.50.60 246 603 1.7E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_06840 4e03f723b5140655aa9256bf1b65e015 614 SUPERFAMILY SSF51971 243 588 2.59E-26 T 11-10-2018 TVD_06840 4e03f723b5140655aa9256bf1b65e015 614 PRINTS PR00419 Adrenodoxin reductase family signature 268 281 1.3E-5 T 11-10-2018 TVD_06840 4e03f723b5140655aa9256bf1b65e015 614 PRINTS PR00419 Adrenodoxin reductase family signature 245 267 1.3E-5 T 11-10-2018 TVD_06840 4e03f723b5140655aa9256bf1b65e015 614 Pfam PF01266 FAD dependent oxidoreductase 245 581 1.1E-28 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TVD_06840 4e03f723b5140655aa9256bf1b65e015 614 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 112 228 9.3E-34 T 11-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 TVD_06840 4e03f723b5140655aa9256bf1b65e015 614 Gene3D G3DSA:3.30.9.10 329 540 1.7E-52 T 11-10-2018 TVD_06840 4e03f723b5140655aa9256bf1b65e015 614 Gene3D G3DSA:3.40.50.150 5 236 6.1E-74 T 11-10-2018 TVD_06840 4e03f723b5140655aa9256bf1b65e015 614 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 3 606 18.876 T 11-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 Pfam PF01627 Hpt domain 1132 1224 5.7E-14 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 Pfam PF01627 Hpt domain 969 1055 1.2E-9 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 Pfam PF01627 Hpt domain 661 746 2.1E-12 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 Pfam PF01584 CheW-like domain 1637 1769 7.9E-21 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 SUPERFAMILY SSF47226 967 1073 2.22E-14 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 Pfam PF00072 Response regulator receiver domain 1793 1905 4.4E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 SUPERFAMILY SSF47226 4 123 7.06E-7 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1617 1630 4.6E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1593 1611 4.6E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1537 1551 4.6E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 SMART SM00448 1791 1904 1.5E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 SMART SM00073 964 1063 0.12 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 SMART SM00073 659 756 1.1E-6 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 SMART SM00073 1129 1227 0.04 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1496 1632 3.6E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 SMART SM01231 1309 1447 1.3E-4 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 Gene3D G3DSA:2.40.50.180 1656 1723 2.2E-36 T 11-10-2018 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 SMART SM00387 1492 1633 2.2E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 SUPERFAMILY SSF47226 1129 1251 3.66E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 SUPERFAMILY SSF47226 659 782 1.83E-23 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 Gene3D G3DSA:2.30.30.40 1633 1763 2.2E-36 T 11-10-2018 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 Gene3D G3DSA:1.20.120.160 961 1072 4.2E-8 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 Gene3D G3DSA:1.20.120.160 1123 1251 6.9E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 Gene3D G3DSA:1.20.120.160 655 779 5.5E-20 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 SUPERFAMILY SSF55874 1445 1634 2.36E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 SUPERFAMILY SSF50341 1632 1767 1.83E-25 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 Gene3D G3DSA:3.30.565.10 1446 1632 7.9E-52 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 SUPERFAMILY SSF52172 1791 1909 4.84E-36 T 11-10-2018 IPR011006 CheY-like superfamily TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 SMART SM00260 1625 1768 5.3E-29 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_12615 f9c025e8e79b682e8c540eb86aa93ba1 1913 Gene3D G3DSA:3.40.50.12740 1790 1911 2.5E-37 T 11-10-2018 TVD_08535 7e0656c47468249eb2b6b9093d7c4029 320 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 2.2E-31 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TVD_08535 7e0656c47468249eb2b6b9093d7c4029 320 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 320 1.4E-136 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TVD_08535 7e0656c47468249eb2b6b9093d7c4029 320 Gene3D G3DSA:3.40.47.10 1 320 1.1E-133 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TVD_08535 7e0656c47468249eb2b6b9093d7c4029 320 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 320 70.674 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TVD_08535 7e0656c47468249eb2b6b9093d7c4029 320 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 231 320 3.8E-37 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 TVD_08535 7e0656c47468249eb2b6b9093d7c4029 320 SUPERFAMILY SSF53901 3 320 1.77E-70 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TVD_13060 ccd0b49327afe384903b86f763d9d4a3 293 Gene3D G3DSA:3.60.10.10 39 288 7.6E-35 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TVD_13060 ccd0b49327afe384903b86f763d9d4a3 293 SUPERFAMILY SSF56219 36 284 1.2E-34 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TVD_13060 ccd0b49327afe384903b86f763d9d4a3 293 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 73 273 6.1E-13 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TVD_04075 7b6ae5478b35247f538a3384f711ba9e 106 SUPERFAMILY SSF46626 8 98 9.31E-11 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_04075 7b6ae5478b35247f538a3384f711ba9e 106 Gene3D G3DSA:1.10.760.10 28 102 1.7E-5 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_04075 7b6ae5478b35247f538a3384f711ba9e 106 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 29 97 1.0E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_01200 4cca5004668e552312c81b2c5602ada8 108 PRINTS PR01591 DNA-binding protein FIS signature 27 43 6.6E-7 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 TVD_01200 4cca5004668e552312c81b2c5602ada8 108 PRINTS PR01591 DNA-binding protein FIS signature 43 58 6.6E-7 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 TVD_01200 4cca5004668e552312c81b2c5602ada8 108 PRINTS PR01591 DNA-binding protein FIS signature 58 70 6.6E-7 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 TVD_01200 4cca5004668e552312c81b2c5602ada8 108 SUPERFAMILY SSF46689 31 98 1.3E-20 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_01200 4cca5004668e552312c81b2c5602ada8 108 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 79 99 5.3E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_01200 4cca5004668e552312c81b2c5602ada8 108 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 62 79 5.3E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_01200 4cca5004668e552312c81b2c5602ada8 108 Pfam PF02954 Bacterial regulatory protein, Fis family 58 94 8.2E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_01200 4cca5004668e552312c81b2c5602ada8 108 Gene3D G3DSA:1.10.10.60 21 98 1.1E-24 T 11-10-2018 TVD_01355 62499555440e6af1a63c78608705286b 121 Gene3D G3DSA:3.30.1130.10 1 116 8.7E-37 T 11-10-2018 TVD_01355 62499555440e6af1a63c78608705286b 121 SMART SM00905 4 114 3.2E-38 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 TVD_01355 62499555440e6af1a63c78608705286b 121 Pfam PF02152 Dihydroneopterin aldolase 4 113 7.9E-29 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 TVD_01355 62499555440e6af1a63c78608705286b 121 SUPERFAMILY SSF55620 1 115 1.0E-32 T 11-10-2018 TVD_01355 62499555440e6af1a63c78608705286b 121 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 1.0E-25 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 TVD_01355 62499555440e6af1a63c78608705286b 121 TIGRFAM TIGR00526 folB_dom: FolB domain 1 115 8.0E-23 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 TVD_12750 0f96793e6c7ada724060f77aec23575e 307 PIRSF PIRSF000102 1 307 4.8E-92 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TVD_12750 0f96793e6c7ada724060f77aec23575e 307 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 3 142 3.7E-38 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 TVD_12750 0f96793e6c7ada724060f77aec23575e 307 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 2 304 1.7E-110 T 11-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 TVD_12750 0f96793e6c7ada724060f77aec23575e 307 PRINTS PR00086 L-lactate dehydrogenase signature 116 136 6.6E-28 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TVD_12750 0f96793e6c7ada724060f77aec23575e 307 PRINTS PR00086 L-lactate dehydrogenase signature 28 52 6.6E-28 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TVD_12750 0f96793e6c7ada724060f77aec23575e 307 PRINTS PR00086 L-lactate dehydrogenase signature 170 183 6.6E-28 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TVD_12750 0f96793e6c7ada724060f77aec23575e 307 PRINTS PR00086 L-lactate dehydrogenase signature 3 27 6.6E-28 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TVD_12750 0f96793e6c7ada724060f77aec23575e 307 PRINTS PR00086 L-lactate dehydrogenase signature 140 158 6.6E-28 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TVD_12750 0f96793e6c7ada724060f77aec23575e 307 SUPERFAMILY SSF56327 144 304 1.73E-45 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 TVD_12750 0f96793e6c7ada724060f77aec23575e 307 SUPERFAMILY SSF51735 2 142 1.91E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_12750 0f96793e6c7ada724060f77aec23575e 307 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 146 304 1.9E-24 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 TVD_12750 0f96793e6c7ada724060f77aec23575e 307 Gene3D G3DSA:3.90.110.10 145 307 8.4E-51 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 TVD_12750 0f96793e6c7ada724060f77aec23575e 307 Gene3D G3DSA:3.40.50.720 2 144 2.3E-46 T 11-10-2018 TVD_12750 0f96793e6c7ada724060f77aec23575e 307 Hamap MF_00487 Malate dehydrogenase [mdh]. 2 307 40.61 T 11-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 TVD_05355 ca7ad9d6fb9134f7cefe2139fce39885 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 486 1.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_05355 ca7ad9d6fb9134f7cefe2139fce39885 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 432 1.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_05355 ca7ad9d6fb9134f7cefe2139fce39885 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 446 1.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_05355 ca7ad9d6fb9134f7cefe2139fce39885 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 467 1.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_05355 ca7ad9d6fb9134f7cefe2139fce39885 493 SMART SM00387 357 489 7.7E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_05355 ca7ad9d6fb9134f7cefe2139fce39885 493 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 313 9.3E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_05355 ca7ad9d6fb9134f7cefe2139fce39885 493 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 486 3.4E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_05355 ca7ad9d6fb9134f7cefe2139fce39885 493 SUPERFAMILY SSF47384 240 313 4.9E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TVD_05355 ca7ad9d6fb9134f7cefe2139fce39885 493 Gene3D G3DSA:1.10.287.130 239 313 8.2E-18 T 11-10-2018 TVD_05355 ca7ad9d6fb9134f7cefe2139fce39885 493 SUPERFAMILY SSF55874 307 487 9.82E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_05355 ca7ad9d6fb9134f7cefe2139fce39885 493 SMART SM00388 247 315 4.3E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_05355 ca7ad9d6fb9134f7cefe2139fce39885 493 Gene3D G3DSA:3.30.565.10 320 491 8.8E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_04755 957046b8dc74cf0533113108753ce2df 147 Pfam PF01890 Cobalamin synthesis G C-terminus 9 135 2.5E-17 T 11-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 TVD_04755 957046b8dc74cf0533113108753ce2df 147 Gene3D G3DSA:3.30.420.180 2 138 7.8E-24 T 11-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 TVD_04755 957046b8dc74cf0533113108753ce2df 147 SUPERFAMILY SSF159664 5 138 5.49E-23 T 11-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 Gene3D G3DSA:3.40.1110.10 340 541 1.3E-293 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 635 654 5.6E-39 T 11-10-2018 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 545 5.6E-39 T 11-10-2018 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 556 566 5.6E-39 T 11-10-2018 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 330 344 5.6E-39 T 11-10-2018 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 659 671 5.6E-39 T 11-10-2018 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 167 181 5.6E-39 T 11-10-2018 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 Gene3D G3DSA:1.20.1110.10 60 890 1.3E-293 T 11-10-2018 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 Pfam PF00122 E1-E2 ATPase 117 309 3.2E-51 T 11-10-2018 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 Gene3D G3DSA:3.40.50.1000 327 680 1.3E-293 T 11-10-2018 IPR023214 HAD superfamily TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 491 509 5.2E-18 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 635 651 5.2E-18 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 607 623 5.2E-18 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 667 692 5.2E-18 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 SUPERFAMILY SSF56784 328 740 1.43E-62 T 11-10-2018 IPR036412 HAD-like superfamily TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 237 351 8.4E-25 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 88 195 9.2E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 605 725 2.5E-33 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 332 338 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 Gene3D G3DSA:2.70.150.10 26 232 1.3E-293 T 11-10-2018 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 Pfam PF13246 Cation transport ATPase (P-type) 391 476 7.9E-21 T 11-10-2018 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 SUPERFAMILY SSF81665 8 896 7.98E-127 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 Pfam PF00689 Cation transporting ATPase, C-terminus 720 892 5.4E-43 T 11-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 SMART SM00831 9 82 4.2E-36 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 Pfam PF00690 Cation transporter/ATPase, N-terminus 10 75 4.1E-17 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 SUPERFAMILY SSF81653 119 229 1.44E-29 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 TVD_09350 4bafa93bcbf4866d201b76464fb05a63 902 SUPERFAMILY SSF81660 337 538 8.72E-54 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 TVD_12310 35c42736203610e1c2fce6064e941c8d 265 Pfam PF13437 HlyD family secretion protein 152 256 9.3E-12 T 11-10-2018 TVD_12310 35c42736203610e1c2fce6064e941c8d 265 Pfam PF13533 Biotin-lipoyl like 44 88 4.1E-9 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain TVD_12310 35c42736203610e1c2fce6064e941c8d 265 Gene3D G3DSA:2.40.30.170 187 260 6.7E-38 T 11-10-2018 TVD_12310 35c42736203610e1c2fce6064e941c8d 265 Gene3D G3DSA:2.40.50.100 44 186 6.7E-38 T 11-10-2018 TVD_12310 35c42736203610e1c2fce6064e941c8d 265 Gene3D G3DSA:1.10.287.470 80 146 6.7E-38 T 11-10-2018 TVD_12310 35c42736203610e1c2fce6064e941c8d 265 SUPERFAMILY SSF111369 41 207 1.57E-17 T 11-10-2018 TVD_12310 35c42736203610e1c2fce6064e941c8d 265 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 263 4.6E-37 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TVD_11655 2f427b78b52221c3812a33c8acc83f16 553 Gene3D G3DSA:3.40.50.300 1 269 1.8E-39 T 11-10-2018 TVD_11655 2f427b78b52221c3812a33c8acc83f16 553 Gene3D G3DSA:3.40.50.300 270 551 1.6E-51 T 11-10-2018 TVD_11655 2f427b78b52221c3812a33c8acc83f16 553 SUPERFAMILY SSF52540 1 516 7.54E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_11655 2f427b78b52221c3812a33c8acc83f16 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 550 1.6E-154 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 TVD_11655 2f427b78b52221c3812a33c8acc83f16 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 9.6E-17 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal TVD_11655 2f427b78b52221c3812a33c8acc83f16 553 PIRSF PIRSF003128 1 553 9.5E-156 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 TVD_12590 9e45cc4f52875fb616174476a13bb8b8 390 PIRSF PIRSF000497 1 389 7.1E-165 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TVD_12590 9e45cc4f52875fb616174476a13bb8b8 390 Gene3D G3DSA:3.30.300.10 6 238 8.6E-169 T 11-10-2018 TVD_12590 9e45cc4f52875fb616174476a13bb8b8 390 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 387 1.4E-175 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TVD_12590 9e45cc4f52875fb616174476a13bb8b8 390 SUPERFAMILY SSF55973 4 111 2.39E-44 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TVD_12590 9e45cc4f52875fb616174476a13bb8b8 390 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 238 377 1.7E-67 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TVD_12590 9e45cc4f52875fb616174476a13bb8b8 390 Gene3D G3DSA:3.30.300.10 12 275 8.6E-169 T 11-10-2018 TVD_12590 9e45cc4f52875fb616174476a13bb8b8 390 Gene3D G3DSA:3.30.300.10 103 380 8.6E-169 T 11-10-2018 TVD_12590 9e45cc4f52875fb616174476a13bb8b8 390 SUPERFAMILY SSF55973 115 236 5.49E-45 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TVD_12590 9e45cc4f52875fb616174476a13bb8b8 390 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 101 3.2E-39 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TVD_12590 9e45cc4f52875fb616174476a13bb8b8 390 Pfam PF02772 S-adenosylmethionine synthetase, central domain 118 236 2.0E-40 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TVD_12590 9e45cc4f52875fb616174476a13bb8b8 390 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TVD_12590 9e45cc4f52875fb616174476a13bb8b8 390 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 388 55.673 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TVD_12590 9e45cc4f52875fb616174476a13bb8b8 390 SUPERFAMILY SSF55973 238 389 5.89E-69 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TVD_12590 9e45cc4f52875fb616174476a13bb8b8 390 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 264 272 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 TVD_09865 39c023ce89d65eeef3363ee6f7ade4ff 350 SUPERFAMILY SSF53756 8 347 6.28E-62 T 11-10-2018 TVD_09865 39c023ce89d65eeef3363ee6f7ade4ff 350 Gene3D G3DSA:3.40.50.2000 156 329 2.6E-49 T 11-10-2018 TVD_09865 39c023ce89d65eeef3363ee6f7ade4ff 350 Gene3D G3DSA:3.40.50.2000 79 343 2.6E-49 T 11-10-2018 TVD_09865 39c023ce89d65eeef3363ee6f7ade4ff 350 Pfam PF00534 Glycosyl transferases group 1 168 326 3.1E-32 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TVD_13590 7da4aca99213de2e99e24de4820163c9 139 Gene3D G3DSA:2.60.15.10 3 91 1.4E-26 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13590 7da4aca99213de2e99e24de4820163c9 139 SUPERFAMILY SSF46604 89 137 1.28E-13 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13590 7da4aca99213de2e99e24de4820163c9 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 1.5E-10 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain TVD_13590 7da4aca99213de2e99e24de4820163c9 139 SUPERFAMILY SSF51344 3 87 3.4E-20 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13590 7da4aca99213de2e99e24de4820163c9 139 Gene3D G3DSA:1.20.5.440 92 134 4.8E-16 T 11-10-2018 TVD_13590 7da4aca99213de2e99e24de4820163c9 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 132 19.387 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13590 7da4aca99213de2e99e24de4820163c9 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 85 2.7E-25 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13590 7da4aca99213de2e99e24de4820163c9 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 91 1.0E-20 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13590 7da4aca99213de2e99e24de4820163c9 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 133 2.8E-37 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 438 455 1.8E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 455 475 1.8E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 SUPERFAMILY SSF52540 153 396 2.67E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 177 190 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 239 254 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 SUPERFAMILY SSF52172 12 196 2.28E-44 T 11-10-2018 IPR011006 CheY-like superfamily TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 Gene3D G3DSA:3.40.50.300 144 323 6.3E-65 T 11-10-2018 TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 SUPERFAMILY SSF46689 425 471 1.43E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 Gene3D G3DSA:3.40.50.2300 10 143 2.5E-33 T 11-10-2018 TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 Pfam PF02954 Bacterial regulatory protein, Fis family 431 470 5.7E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 Pfam PF00072 Response regulator receiver domain 15 123 1.1E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 Gene3D G3DSA:1.10.10.60 426 470 2.1E-17 T 11-10-2018 TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 Pfam PF00158 Sigma-54 interaction domain 154 319 7.4E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 Gene3D G3DSA:1.10.8.60 324 402 9.5E-21 T 11-10-2018 TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 SMART SM00448 13 124 1.4E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_11170 bf0830f00664fbcd07a425470290c5e3 475 SMART SM00382 173 316 4.3E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 SMART SM00434 11 499 2.4E-292 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 SUPERFAMILY SSF56719 30 521 1.44E-180 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 SUPERFAMILY SSF101904 533 851 5.62E-109 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 839 0.0 T 11-10-2018 TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 Gene3D G3DSA:3.30.1360.40 236 333 6.4E-227 T 11-10-2018 TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 Gene3D G3DSA:2.120.10.90 531 840 1.9E-121 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 840 24.484 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 3.3E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 738 3.0E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 788 8.2E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 1.0E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 2.2E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 583 9.9E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 Gene3D G3DSA:1.10.268.10 370 493 6.4E-227 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 Gene3D G3DSA:3.90.199.10 33 521 6.4E-227 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 TVD_06480 ad9212bc386cf00a44cbf2b1087cd7c2 875 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 503 5.5E-153 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 TVD_01100 acbd94e15de8034396d3fed69c415718 132 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 8 131 37.713 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 TVD_01100 acbd94e15de8034396d3fed69c415718 132 Pfam PF01641 SelR domain 11 130 1.6E-53 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 TVD_01100 acbd94e15de8034396d3fed69c415718 132 SUPERFAMILY SSF51316 7 131 6.28E-58 T 11-10-2018 IPR011057 Mss4-like superfamily TVD_01100 acbd94e15de8034396d3fed69c415718 132 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 7 130 8.2E-55 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 TVD_01100 acbd94e15de8034396d3fed69c415718 132 Gene3D G3DSA:2.170.150.20 1 132 2.9E-60 T 11-10-2018 TVD_05425 aef903be8880a31f2c4894bbdcd87927 192 SUPERFAMILY SSF53254 41 177 4.86E-13 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TVD_05425 aef903be8880a31f2c4894bbdcd87927 192 Gene3D G3DSA:3.40.50.1240 28 189 2.1E-21 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TVD_07470 5c204e23827635b717aeb8c709cc56f3 428 PIRSF PIRSF001529 1 426 1.1E-169 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TVD_07470 5c204e23827635b717aeb8c709cc56f3 428 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.7E-28 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 TVD_07470 5c204e23827635b717aeb8c709cc56f3 428 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 40.049 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TVD_07470 5c204e23827635b717aeb8c709cc56f3 428 Gene3D G3DSA:3.30.930.10 105 426 9.1E-112 T 11-10-2018 TVD_07470 5c204e23827635b717aeb8c709cc56f3 428 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 400 2.0E-33 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_07470 5c204e23827635b717aeb8c709cc56f3 428 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 1.8E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TVD_07470 5c204e23827635b717aeb8c709cc56f3 428 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 1.8E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TVD_07470 5c204e23827635b717aeb8c709cc56f3 428 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 1.8E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TVD_07470 5c204e23827635b717aeb8c709cc56f3 428 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 1.8E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TVD_07470 5c204e23827635b717aeb8c709cc56f3 428 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 1.8E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TVD_07470 5c204e23827635b717aeb8c709cc56f3 428 SUPERFAMILY SSF55681 116 419 1.02E-96 T 11-10-2018 TVD_07470 5c204e23827635b717aeb8c709cc56f3 428 SUPERFAMILY SSF46589 1 112 7.85E-28 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 TVD_07470 5c204e23827635b717aeb8c709cc56f3 428 Gene3D G3DSA:1.10.287.40 1 104 1.6E-20 T 11-10-2018 TVD_07470 5c204e23827635b717aeb8c709cc56f3 428 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 2.3E-164 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 TVD_09155 78653a3bdb2aebd001a41bcab318b188 425 SUPERFAMILY SSF55729 203 383 6.89E-36 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_09155 78653a3bdb2aebd001a41bcab318b188 425 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 31 416 3.1E-135 T 11-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition TVD_09435 dc8574a564aeba58098f9dd65d7d1173 93 Gene3D G3DSA:3.30.1360.20 8 92 2.9E-28 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 TVD_09435 dc8574a564aeba58098f9dd65d7d1173 93 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 10 86 1.1E-8 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 TVD_09435 dc8574a564aeba58098f9dd65d7d1173 93 SUPERFAMILY SSF55248 18 89 4.45E-13 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 TVD_00080 a52df2f0e4fb809553ddc6f5db155153 145 Gene3D G3DSA:1.10.10.10 11 93 4.3E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_00080 a52df2f0e4fb809553ddc6f5db155153 145 SUPERFAMILY SSF46785 16 139 6.82E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_00080 a52df2f0e4fb809553ddc6f5db155153 145 Pfam PF01475 Ferric uptake regulator family 28 118 1.5E-19 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 SUPERFAMILY SSF141868 808 1060 9.02E-83 T 11-10-2018 IPR035919 EAL domain superfamily TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 Pfam PF08447 PAS fold 393 481 4.9E-23 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 Gene3D G3DSA:3.30.450.20 491 627 3.0E-23 T 11-10-2018 TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 366 494 7.1E-10 T 11-10-2018 IPR000014 PAS domain TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 501 625 1.4E-13 T 11-10-2018 IPR000014 PAS domain TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 SUPERFAMILY SSF55073 634 793 4.32E-47 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 Gene3D G3DSA:3.30.450.20 366 438 3.7E-18 T 11-10-2018 TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 SMART SM00091 503 569 4.3E-8 T 11-10-2018 IPR000014 PAS domain TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 SMART SM00091 370 438 0.0067 T 11-10-2018 IPR000014 PAS domain TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 Pfam PF00563 EAL domain 808 1044 3.7E-68 T 11-10-2018 IPR001633 EAL domain TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 Gene3D G3DSA:3.30.70.270 628 805 1.0E-56 T 11-10-2018 TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 SUPERFAMILY SSF55785 379 489 3.84E-21 T 11-10-2018 IPR035965 PAS domain superfamily TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 Pfam PF08448 PAS fold 510 619 2.2E-18 T 11-10-2018 IPR013656 PAS fold-4 TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 SMART SM00267 618 792 1.5E-61 T 11-10-2018 IPR000160 GGDEF domain TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 Gene3D G3DSA:2.10.70.100 442 490 2.7E-12 T 11-10-2018 TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 SMART SM01079 81 277 6.3E-74 T 11-10-2018 IPR006189 CHASE domain TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 625 792 1.9E-41 T 11-10-2018 IPR000160 GGDEF domain TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 SMART SM00086 574 618 80.0 T 11-10-2018 IPR001610 PAC motif TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 SMART SM00086 445 488 4.8E-9 T 11-10-2018 IPR001610 PAC motif TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 SMART SM00052 802 1049 4.7E-98 T 11-10-2018 IPR001633 EAL domain TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 Pfam PF00990 Diguanylate cyclase, GGDEF domain 629 787 4.1E-46 T 11-10-2018 IPR000160 GGDEF domain TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 SUPERFAMILY SSF55785 485 616 1.38E-21 T 11-10-2018 IPR035965 PAS domain superfamily TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 Pfam PF03924 CHASE domain 84 274 4.7E-57 T 11-10-2018 IPR006189 CHASE domain TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 Gene3D G3DSA:3.30.450.350 85 298 3.3E-38 T 11-10-2018 TVD_10200 5c7c90a1e0b232e2e31bb52f4f613e3e 1183 Gene3D G3DSA:3.20.20.450 806 1055 3.1E-89 T 11-10-2018 IPR035919 EAL domain superfamily TVD_06950 18f59bf43b1ef580f2d900a75613013e 362 SMART SM00729 66 294 0.0028 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TVD_06950 18f59bf43b1ef580f2d900a75613013e 362 Gene3D G3DSA:3.80.30.30 112 240 8.4E-6 T 11-10-2018 TVD_06950 18f59bf43b1ef580f2d900a75613013e 362 Pfam PF04055 Radical SAM superfamily 71 248 1.9E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TVD_06950 18f59bf43b1ef580f2d900a75613013e 362 SUPERFAMILY SSF102114 63 254 1.57E-6 T 11-10-2018 TVD_11055 1f6535349826d933b7685b28526beb29 372 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 22 367 2.6E-131 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_11055 1f6535349826d933b7685b28526beb29 372 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 17 370 27.526 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_11055 1f6535349826d933b7685b28526beb29 372 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 325 349 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_11055 1f6535349826d933b7685b28526beb29 372 Pfam PF01098 Cell cycle protein 26 368 1.9E-107 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_05450 1d75b9dd49854d3979da7952e8a10419 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 1.9E-118 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_05450 1d75b9dd49854d3979da7952e8a10419 337 Gene3D G3DSA:3.40.50.720 4 329 1.2E-126 T 11-10-2018 TVD_05450 1d75b9dd49854d3979da7952e8a10419 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 315 1.1E-57 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_05450 1d75b9dd49854d3979da7952e8a10419 337 SMART SM00846 3 154 1.4E-67 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_05450 1d75b9dd49854d3979da7952e8a10419 337 Gene3D G3DSA:3.30.360.10 153 317 1.2E-126 T 11-10-2018 TVD_05450 1d75b9dd49854d3979da7952e8a10419 337 PIRSF PIRSF000149 1 336 4.1E-116 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_05450 1d75b9dd49854d3979da7952e8a10419 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 103 8.9E-31 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_05450 1d75b9dd49854d3979da7952e8a10419 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 1.3E-31 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_05450 1d75b9dd49854d3979da7952e8a10419 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 1.3E-31 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_05450 1d75b9dd49854d3979da7952e8a10419 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 1.3E-31 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_05450 1d75b9dd49854d3979da7952e8a10419 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 1.3E-31 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_05450 1d75b9dd49854d3979da7952e8a10419 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 1.3E-31 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_05450 1d75b9dd49854d3979da7952e8a10419 337 SUPERFAMILY SSF51735 1 175 4.14E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_05450 1d75b9dd49854d3979da7952e8a10419 337 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 152 159 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_05450 1d75b9dd49854d3979da7952e8a10419 337 SUPERFAMILY SSF55347 154 316 2.98E-62 T 11-10-2018 TVD_06675 16e80a968f44f22b0fbfbeab067bb8c9 452 Gene3D G3DSA:3.90.1150.10 13 440 7.5E-161 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_06675 16e80a968f44f22b0fbfbeab067bb8c9 452 Gene3D G3DSA:3.40.640.10 67 344 7.5E-161 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_06675 16e80a968f44f22b0fbfbeab067bb8c9 452 Pfam PF00202 Aminotransferase class-III 31 443 8.3E-125 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TVD_06675 16e80a968f44f22b0fbfbeab067bb8c9 452 SUPERFAMILY SSF53383 9 446 7.83E-132 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_06675 16e80a968f44f22b0fbfbeab067bb8c9 452 PIRSF PIRSF000521 25 448 7.9E-31 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TVD_06675 16e80a968f44f22b0fbfbeab067bb8c9 452 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 449 50.188 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 TVD_06675 16e80a968f44f22b0fbfbeab067bb8c9 452 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TVD_06675 16e80a968f44f22b0fbfbeab067bb8c9 452 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 446 1.7E-172 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 TVD_02475 db223270a934b00e696e288c413d66a0 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 3.9E-81 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 TVD_02475 db223270a934b00e696e288c413d66a0 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 35.945 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 TVD_02475 db223270a934b00e696e288c413d66a0 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 2.4E-32 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 TVD_02475 db223270a934b00e696e288c413d66a0 206 SMART SM00363 96 156 7.9E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02475 db223270a934b00e696e288c413d66a0 206 Gene3D G3DSA:1.10.1050.10 1 102 1.4E-44 T 11-10-2018 TVD_02475 db223270a934b00e696e288c413d66a0 206 SUPERFAMILY SSF55174 3 206 1.83E-72 T 11-10-2018 TVD_02475 db223270a934b00e696e288c413d66a0 206 SMART SM01390 3 95 2.3E-47 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 TVD_02475 db223270a934b00e696e288c413d66a0 206 Pfam PF01479 S4 domain 97 143 8.4E-20 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02475 db223270a934b00e696e288c413d66a0 206 Gene3D G3DSA:3.10.290.10 103 191 9.6E-33 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TVD_02475 db223270a934b00e696e288c413d66a0 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 Gene3D G3DSA:1.10.40.30 381 451 3.5E-148 T 11-10-2018 TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 Gene3D G3DSA:1.20.200.10 126 464 3.5E-148 T 11-10-2018 TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 TIGRFAM TIGR00838 argH: argininosuccinate lyase 22 474 1.0E-192 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 SUPERFAMILY SSF48557 22 474 3.46E-158 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 Pfam PF14698 Argininosuccinate lyase C-terminal 382 448 1.7E-24 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 6.5E-31 T 11-10-2018 IPR000362 Fumarate lyase family TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 PRINTS PR00149 Fumarate lyase superfamily signature 121 139 6.5E-31 T 11-10-2018 IPR000362 Fumarate lyase family TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 PRINTS PR00149 Fumarate lyase superfamily signature 166 184 6.5E-31 T 11-10-2018 IPR000362 Fumarate lyase family TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 PRINTS PR00149 Fumarate lyase superfamily signature 250 277 6.5E-31 T 11-10-2018 IPR000362 Fumarate lyase family TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 Hamap MF_00006 Argininosuccinate lyase [argH]. 21 472 44.679 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 Gene3D G3DSA:1.10.275.50 19 125 1.7E-43 T 11-10-2018 TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 Pfam PF00206 Lyase 25 319 3.6E-83 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 PRINTS PR00145 Argininosuccinate lyase family signature 294 310 4.8E-67 T 11-10-2018 TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 PRINTS PR00145 Argininosuccinate lyase family signature 212 228 4.8E-67 T 11-10-2018 TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 PRINTS PR00145 Argininosuccinate lyase family signature 120 142 4.8E-67 T 11-10-2018 TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 PRINTS PR00145 Argininosuccinate lyase family signature 250 274 4.8E-67 T 11-10-2018 TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 PRINTS PR00145 Argininosuccinate lyase family signature 329 348 4.8E-67 T 11-10-2018 TVD_13420 7cb2beac68a5fca581c6068ba894adcc 482 PRINTS PR00145 Argininosuccinate lyase family signature 161 181 4.8E-67 T 11-10-2018 TVD_01240 3d46cb77baec4d6afe41d55d435c0e5e 282 Gene3D G3DSA:3.40.50.10860 9 263 1.2E-74 T 11-10-2018 TVD_01240 3d46cb77baec4d6afe41d55d435c0e5e 282 Gene3D G3DSA:3.40.50.720 120 244 1.2E-74 T 11-10-2018 TVD_01240 3d46cb77baec4d6afe41d55d435c0e5e 282 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 9 279 1.8E-73 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 TVD_01240 3d46cb77baec4d6afe41d55d435c0e5e 282 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 6 278 31.216 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 TVD_01240 3d46cb77baec4d6afe41d55d435c0e5e 282 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 121 178 3.1E-7 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase TVD_01240 3d46cb77baec4d6afe41d55d435c0e5e 282 SUPERFAMILY SSF51735 107 277 1.09E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_01240 3d46cb77baec4d6afe41d55d435c0e5e 282 SUPERFAMILY SSF53223 5 106 1.04E-30 T 11-10-2018 TVD_01240 3d46cb77baec4d6afe41d55d435c0e5e 282 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 11 93 1.9E-23 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 TVD_09895 3591e4e8faa84c3da13407e199a649a7 210 Pfam PF08241 Methyltransferase domain 39 127 8.6E-21 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TVD_09895 3591e4e8faa84c3da13407e199a649a7 210 SUPERFAMILY SSF53335 21 186 6.04E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_09895 3591e4e8faa84c3da13407e199a649a7 210 Gene3D G3DSA:3.40.50.150 21 184 2.0E-32 T 11-10-2018 TVD_02440 ddb9901301a0af738b7dddcb19371fb1 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.646 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02440 ddb9901301a0af738b7dddcb19371fb1 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 1.6E-42 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02440 ddb9901301a0af738b7dddcb19371fb1 117 SUPERFAMILY SSF53137 3 115 1.7E-51 T 11-10-2018 TVD_02440 ddb9901301a0af738b7dddcb19371fb1 117 Gene3D G3DSA:3.30.420.100 1 117 3.5E-42 T 11-10-2018 TVD_02440 ddb9901301a0af738b7dddcb19371fb1 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 2 117 1.1E-40 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_01990 b594c36b5f689e5a3e7a7ddc4c9428a6 399 SUPERFAMILY SSF53649 55 393 1.7E-38 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TVD_01990 b594c36b5f689e5a3e7a7ddc4c9428a6 399 Gene3D G3DSA:3.40.720.10 51 394 3.0E-29 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TVD_01990 b594c36b5f689e5a3e7a7ddc4c9428a6 399 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 83 380 1.5E-19 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 TVD_03730 4345ea9cc75f09c6bd69242174d0afdd 199 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 43 114 8.0E-6 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TVD_03730 4345ea9cc75f09c6bd69242174d0afdd 199 SUPERFAMILY SSF53254 43 185 1.14E-13 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TVD_03730 4345ea9cc75f09c6bd69242174d0afdd 199 Gene3D G3DSA:3.40.50.1240 31 187 1.2E-18 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TVD_05485 ed1863cbb2665c3b7b565ba536d4a159 351 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 236 255 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 TVD_05485 ed1863cbb2665c3b7b565ba536d4a159 351 SUPERFAMILY SSF53659 1 349 1.08E-119 T 11-10-2018 TVD_05485 ed1863cbb2665c3b7b565ba536d4a159 351 Gene3D G3DSA:3.40.718.10 1 351 1.6E-143 T 11-10-2018 TVD_05485 ed1863cbb2665c3b7b565ba536d4a159 351 SMART SM01329 1 345 1.6E-196 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TVD_05485 ed1863cbb2665c3b7b565ba536d4a159 351 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 1 344 5.2E-133 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 TVD_05485 ed1863cbb2665c3b7b565ba536d4a159 351 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 349 49.827 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 TVD_05485 ed1863cbb2665c3b7b565ba536d4a159 351 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 1 344 1.1E-153 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 TVD_04580 e8c7714c89ccf5bcee30d8174d16d48a 233 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 8 209 3.4E-79 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 TVD_04580 e8c7714c89ccf5bcee30d8174d16d48a 233 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 201 9.8E-60 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TVD_04580 e8c7714c89ccf5bcee30d8174d16d48a 233 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 211 26.355 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 TVD_04580 e8c7714c89ccf5bcee30d8174d16d48a 233 PIRSF PIRSF006102 1 218 1.7E-72 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TVD_04790 ef6e75c6ceeb4110aadc65e011c6f865 468 Gene3D G3DSA:1.10.10.350 367 466 8.3E-26 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TVD_04790 ef6e75c6ceeb4110aadc65e011c6f865 468 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 304 1.7E-108 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 TVD_04790 ef6e75c6ceeb4110aadc65e011c6f865 468 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_04790 ef6e75c6ceeb4110aadc65e011c6f865 468 SUPERFAMILY SSF48163 298 460 5.62E-43 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TVD_04790 ef6e75c6ceeb4110aadc65e011c6f865 468 Gene3D G3DSA:3.40.50.620 2 313 2.4E-136 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_04790 ef6e75c6ceeb4110aadc65e011c6f865 468 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 460 33.027 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TVD_04790 ef6e75c6ceeb4110aadc65e011c6f865 468 SUPERFAMILY SSF52374 3 295 9.92E-115 T 11-10-2018 TVD_04790 ef6e75c6ceeb4110aadc65e011c6f865 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 202 5.8E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TVD_04790 ef6e75c6ceeb4110aadc65e011c6f865 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 5.8E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TVD_04790 ef6e75c6ceeb4110aadc65e011c6f865 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 5.8E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TVD_04790 ef6e75c6ceeb4110aadc65e011c6f865 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 178 188 5.8E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TVD_04790 ef6e75c6ceeb4110aadc65e011c6f865 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 5.8E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TVD_04790 ef6e75c6ceeb4110aadc65e011c6f865 468 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 459 1.7E-179 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TVD_07955 17e0be6dca1297729972171c2999f584 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 97 2.3E-46 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 TVD_07955 17e0be6dca1297729972171c2999f584 99 Pfam PF00216 Bacterial DNA-binding protein 4 92 1.3E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TVD_07955 17e0be6dca1297729972171c2999f584 99 Gene3D G3DSA:4.10.520.10 2 97 7.9E-36 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TVD_07955 17e0be6dca1297729972171c2999f584 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 TVD_07955 17e0be6dca1297729972171c2999f584 99 SUPERFAMILY SSF47729 4 94 4.12E-31 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TVD_07955 17e0be6dca1297729972171c2999f584 99 SMART SM00411 4 93 6.6E-40 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TVD_07955 17e0be6dca1297729972171c2999f584 99 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 3.3E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TVD_07955 17e0be6dca1297729972171c2999f584 99 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 3.3E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TVD_07955 17e0be6dca1297729972171c2999f584 99 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 3.3E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TVD_07955 17e0be6dca1297729972171c2999f584 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 30.154 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 TVD_04905 0ccc0cec24c6cd4d2ed61eaf9aa6d392 67 Gene3D G3DSA:1.10.10.600 1 64 5.6E-30 T 11-10-2018 IPR036762 IscX-like superfamily TVD_04905 0ccc0cec24c6cd4d2ed61eaf9aa6d392 67 SUPERFAMILY SSF140319 1 62 6.02E-27 T 11-10-2018 IPR036762 IscX-like superfamily TVD_04905 0ccc0cec24c6cd4d2ed61eaf9aa6d392 67 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 1.3E-35 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 TVD_04905 0ccc0cec24c6cd4d2ed61eaf9aa6d392 67 PIRSF PIRSF039003 1 64 3.6E-35 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 TVD_04905 0ccc0cec24c6cd4d2ed61eaf9aa6d392 67 Pfam PF04384 Iron-sulphur cluster assembly 1 63 1.1E-32 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 TVD_04950 e875daa86e67c2cbb0095a8ff6cdbad0 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 200 223 2.5E-11 T 11-10-2018 TVD_04950 e875daa86e67c2cbb0095a8ff6cdbad0 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 95 115 2.5E-11 T 11-10-2018 TVD_04950 e875daa86e67c2cbb0095a8ff6cdbad0 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 164 188 2.5E-11 T 11-10-2018 TVD_04950 e875daa86e67c2cbb0095a8ff6cdbad0 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 271 294 2.5E-11 T 11-10-2018 TVD_04950 e875daa86e67c2cbb0095a8ff6cdbad0 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 117 138 2.5E-11 T 11-10-2018 TVD_04950 e875daa86e67c2cbb0095a8ff6cdbad0 389 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 232 245 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 TVD_04950 e875daa86e67c2cbb0095a8ff6cdbad0 389 Gene3D G3DSA:3.40.640.10 7 388 2.5E-129 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_04950 e875daa86e67c2cbb0095a8ff6cdbad0 389 Pfam PF00155 Aminotransferase class I and II 34 382 9.7E-62 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TVD_04950 e875daa86e67c2cbb0095a8ff6cdbad0 389 SUPERFAMILY SSF53383 23 387 6.97E-108 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_01775 8adfa9571579cdccf48bff1dcc068bc3 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.527 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_01775 8adfa9571579cdccf48bff1dcc068bc3 71 Pfam PF01165 Ribosomal protein S21 3 56 6.9E-22 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_01775 8adfa9571579cdccf48bff1dcc068bc3 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_01775 8adfa9571579cdccf48bff1dcc068bc3 71 Gene3D G3DSA:1.20.5.1150 16 54 7.3E-21 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_01775 8adfa9571579cdccf48bff1dcc068bc3 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 8.0E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_01775 8adfa9571579cdccf48bff1dcc068bc3 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 3.1E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_01775 8adfa9571579cdccf48bff1dcc068bc3 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 3.1E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_01775 8adfa9571579cdccf48bff1dcc068bc3 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 3.1E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_01775 8adfa9571579cdccf48bff1dcc068bc3 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 3.1E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_01775 8adfa9571579cdccf48bff1dcc068bc3 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.6E-23 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_12865 9338866ec577b54629920ffab901f688 274 Pfam PF12697 Alpha/beta hydrolase family 26 258 1.7E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TVD_12865 9338866ec577b54629920ffab901f688 274 Gene3D G3DSA:3.40.50.1820 16 269 8.6E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_12865 9338866ec577b54629920ffab901f688 274 SUPERFAMILY SSF53474 19 267 2.42E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_01185 4f1a9abb1d66e3cde25acc663e4ea965 194 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 192 9.5E-41 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TVD_01185 4f1a9abb1d66e3cde25acc663e4ea965 194 Gene3D G3DSA:3.40.50.1240 3 194 8.1E-42 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TVD_01185 4f1a9abb1d66e3cde25acc663e4ea965 194 SUPERFAMILY SSF53254 3 192 6.77E-44 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TVD_01185 4f1a9abb1d66e3cde25acc663e4ea965 194 PIRSF PIRSF000709 2 184 6.0E-12 T 11-10-2018 TVD_01185 4f1a9abb1d66e3cde25acc663e4ea965 194 SMART SM00855 2 153 7.7E-14 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TVD_10485 d65dff0b023b13dc89c07e31ff837268 247 Gene3D G3DSA:3.40.470.10 61 245 3.2E-72 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TVD_10485 d65dff0b023b13dc89c07e31ff837268 247 SUPERFAMILY SSF52141 62 242 6.87E-62 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TVD_10485 d65dff0b023b13dc89c07e31ff837268 247 SMART SM00987 88 235 8.8E-44 T 11-10-2018 TVD_10485 d65dff0b023b13dc89c07e31ff837268 247 SMART SM00986 88 235 8.8E-44 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TVD_10485 d65dff0b023b13dc89c07e31ff837268 247 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 73 241 7.3E-60 T 11-10-2018 IPR005273 Uracil-DNA glycosylase family 4 TVD_10485 d65dff0b023b13dc89c07e31ff837268 247 Pfam PF03167 Uracil DNA glycosylase superfamily 88 235 3.5E-45 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TVD_03405 de2ab92f4343e7b97160bebeadc94fdc 434 SUPERFAMILY SSF53850 56 329 5.61E-22 T 11-10-2018 TVD_03405 de2ab92f4343e7b97160bebeadc94fdc 434 Pfam PF13379 NMT1-like family 48 301 4.5E-96 T 11-10-2018 TVD_03405 de2ab92f4343e7b97160bebeadc94fdc 434 Gene3D G3DSA:3.40.190.10 142 420 2.0E-126 T 11-10-2018 TVD_03405 de2ab92f4343e7b97160bebeadc94fdc 434 Gene3D G3DSA:3.40.190.10 56 415 2.0E-126 T 11-10-2018 TVD_03530 cee5144d681036dc78873285f908ead1 377 Gene3D G3DSA:3.40.50.880 151 375 2.1E-72 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_03530 cee5144d681036dc78873285f908ead1 377 Gene3D G3DSA:3.50.30.20 3 150 5.9E-59 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03530 cee5144d681036dc78873285f908ead1 377 SUPERFAMILY SSF52317 154 374 1.63E-58 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_03530 cee5144d681036dc78873285f908ead1 377 SUPERFAMILY SSF52021 4 149 5.62E-58 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03530 cee5144d681036dc78873285f908ead1 377 PRINTS PR00097 Anthranilate synthase component II signature 234 243 1.5E-5 T 11-10-2018 TVD_03530 cee5144d681036dc78873285f908ead1 377 PRINTS PR00097 Anthranilate synthase component II signature 347 360 1.5E-5 T 11-10-2018 TVD_03530 cee5144d681036dc78873285f908ead1 377 PRINTS PR00097 Anthranilate synthase component II signature 262 273 1.5E-5 T 11-10-2018 TVD_03530 cee5144d681036dc78873285f908ead1 377 PRINTS PR00096 Glutamine amidotransferase superfamily signature 262 273 3.7E-11 T 11-10-2018 TVD_03530 cee5144d681036dc78873285f908ead1 377 PRINTS PR00096 Glutamine amidotransferase superfamily signature 234 243 3.7E-11 T 11-10-2018 TVD_03530 cee5144d681036dc78873285f908ead1 377 PRINTS PR00096 Glutamine amidotransferase superfamily signature 347 360 3.7E-11 T 11-10-2018 TVD_03530 cee5144d681036dc78873285f908ead1 377 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 373 1.5E-143 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03530 cee5144d681036dc78873285f908ead1 377 Pfam PF00117 Glutamine amidotransferase class-I 195 370 4.5E-45 T 11-10-2018 IPR017926 Glutamine amidotransferase TVD_03530 cee5144d681036dc78873285f908ead1 377 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 376 47.915 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03530 cee5144d681036dc78873285f908ead1 377 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.8E-52 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03530 cee5144d681036dc78873285f908ead1 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 231 245 4.0E-38 T 11-10-2018 TVD_03530 cee5144d681036dc78873285f908ead1 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 262 278 4.0E-38 T 11-10-2018 TVD_03530 cee5144d681036dc78873285f908ead1 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 304 315 4.0E-38 T 11-10-2018 TVD_03530 cee5144d681036dc78873285f908ead1 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 192 206 4.0E-38 T 11-10-2018 TVD_03530 cee5144d681036dc78873285f908ead1 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 279 296 4.0E-38 T 11-10-2018 TVD_03530 cee5144d681036dc78873285f908ead1 377 SMART SM01097 3 133 1.7E-92 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_12035 5b6cd1e563d2ee036029b10688f95625 321 Gene3D G3DSA:3.30.1330.60 179 282 2.7E-18 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_12035 5b6cd1e563d2ee036029b10688f95625 321 Pfam PF00691 OmpA family 186 264 1.9E-12 T 11-10-2018 IPR006665 OmpA-like domain TVD_12035 5b6cd1e563d2ee036029b10688f95625 321 PRINTS PR01021 OMPA domain signature 232 248 3.8E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TVD_12035 5b6cd1e563d2ee036029b10688f95625 321 PRINTS PR01021 OMPA domain signature 187 209 3.8E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TVD_12035 5b6cd1e563d2ee036029b10688f95625 321 PRINTS PR01021 OMPA domain signature 217 232 3.8E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TVD_12035 5b6cd1e563d2ee036029b10688f95625 321 Gene3D G3DSA:2.60.40.2540 27 167 9.0E-8 T 11-10-2018 TVD_12035 5b6cd1e563d2ee036029b10688f95625 321 SUPERFAMILY SSF103088 183 282 3.92E-19 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_12530 9a4c31a835449a3004cd81de278f61b2 221 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 6 208 1.2E-9 T 11-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 TVD_07695 c1ed5d7ddece27be3fea8f6874fa23ae 589 SUPERFAMILY SSF55073 161 323 1.8E-47 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_07695 c1ed5d7ddece27be3fea8f6874fa23ae 589 SMART SM00267 145 321 1.5E-59 T 11-10-2018 IPR000160 GGDEF domain TVD_07695 c1ed5d7ddece27be3fea8f6874fa23ae 589 SMART SM00052 331 577 1.9E-102 T 11-10-2018 IPR001633 EAL domain TVD_07695 c1ed5d7ddece27be3fea8f6874fa23ae 589 SUPERFAMILY SSF141868 336 584 8.37E-81 T 11-10-2018 IPR035919 EAL domain superfamily TVD_07695 c1ed5d7ddece27be3fea8f6874fa23ae 589 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 317 1.2E-43 T 11-10-2018 IPR000160 GGDEF domain TVD_07695 c1ed5d7ddece27be3fea8f6874fa23ae 589 Gene3D G3DSA:3.30.450.20 17 143 1.6E-18 T 11-10-2018 TVD_07695 c1ed5d7ddece27be3fea8f6874fa23ae 589 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 26 151 1.1E-16 T 11-10-2018 IPR000014 PAS domain TVD_07695 c1ed5d7ddece27be3fea8f6874fa23ae 589 Pfam PF00563 EAL domain 337 572 1.6E-68 T 11-10-2018 IPR001633 EAL domain TVD_07695 c1ed5d7ddece27be3fea8f6874fa23ae 589 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 153 320 1.3E-40 T 11-10-2018 IPR000160 GGDEF domain TVD_07695 c1ed5d7ddece27be3fea8f6874fa23ae 589 Gene3D G3DSA:3.20.20.450 333 586 3.2E-89 T 11-10-2018 IPR035919 EAL domain superfamily TVD_07695 c1ed5d7ddece27be3fea8f6874fa23ae 589 SMART SM00091 30 96 1.6E-8 T 11-10-2018 IPR000014 PAS domain TVD_07695 c1ed5d7ddece27be3fea8f6874fa23ae 589 SMART SM00091 294 364 220.0 T 11-10-2018 IPR000014 PAS domain TVD_07695 c1ed5d7ddece27be3fea8f6874fa23ae 589 Gene3D G3DSA:3.30.70.270 150 332 4.8E-57 T 11-10-2018 TVD_07695 c1ed5d7ddece27be3fea8f6874fa23ae 589 SUPERFAMILY SSF55785 18 143 4.19E-17 T 11-10-2018 IPR035965 PAS domain superfamily TVD_07695 c1ed5d7ddece27be3fea8f6874fa23ae 589 Pfam PF13426 PAS domain 40 144 6.6E-8 T 11-10-2018 IPR000014 PAS domain TVD_10900 54bcfbecd87f52b32201ff2a9fa666a6 404 SMART SM00244 89 250 2.8E-34 T 11-10-2018 IPR001107 Band 7 domain TVD_10900 54bcfbecd87f52b32201ff2a9fa666a6 404 Gene3D G3DSA:3.30.479.30 133 240 3.8E-18 T 11-10-2018 TVD_10900 54bcfbecd87f52b32201ff2a9fa666a6 404 Pfam PF01145 SPFH domain / Band 7 family 93 265 1.2E-25 T 11-10-2018 IPR001107 Band 7 domain TVD_10900 54bcfbecd87f52b32201ff2a9fa666a6 404 Pfam PF12221 Bacterial membrane protein N terminal 1 54 1.3E-15 T 11-10-2018 IPR020980 Menbrane protein HflK, N-terminal TVD_10900 54bcfbecd87f52b32201ff2a9fa666a6 404 PRINTS PR00721 Stomatin signature 144 165 3.0E-8 T 11-10-2018 IPR001972 Stomatin family GO:0016020 TVD_10900 54bcfbecd87f52b32201ff2a9fa666a6 404 PRINTS PR00721 Stomatin signature 179 196 3.0E-8 T 11-10-2018 IPR001972 Stomatin family GO:0016020 TVD_10900 54bcfbecd87f52b32201ff2a9fa666a6 404 PRINTS PR00721 Stomatin signature 96 118 3.0E-8 T 11-10-2018 IPR001972 Stomatin family GO:0016020 TVD_10900 54bcfbecd87f52b32201ff2a9fa666a6 404 SUPERFAMILY SSF117892 139 254 8.89E-19 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily TVD_10900 54bcfbecd87f52b32201ff2a9fa666a6 404 TIGRFAM TIGR01933 hflK: HflK protein 91 352 1.3E-97 T 11-10-2018 IPR010201 HflK GO:0016021 TVD_06650 619b973447ac8b76feadb9e3dde78d23 676 Gene3D G3DSA:3.40.50.300 272 417 3.0E-52 T 11-10-2018 TVD_06650 619b973447ac8b76feadb9e3dde78d23 676 Pfam PF04851 Type III restriction enzyme, res subunit 18 96 1.2E-9 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TVD_06650 619b973447ac8b76feadb9e3dde78d23 676 Pfam PF12344 Ultra-violet resistance protein B 555 596 1.6E-21 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain TVD_06650 619b973447ac8b76feadb9e3dde78d23 676 SUPERFAMILY SSF52540 39 585 5.21E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06650 619b973447ac8b76feadb9e3dde78d23 676 SUPERFAMILY SSF52540 8 418 1.66E-138 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06650 619b973447ac8b76feadb9e3dde78d23 676 SUPERFAMILY SSF46600 629 667 2.48E-9 T 11-10-2018 IPR036876 UVR domain superfamily TVD_06650 619b973447ac8b76feadb9e3dde78d23 676 Gene3D G3DSA:3.40.50.300 418 599 2.9E-49 T 11-10-2018 TVD_06650 619b973447ac8b76feadb9e3dde78d23 676 Gene3D G3DSA:3.40.50.300 3 239 9.4E-74 T 11-10-2018 TVD_06650 619b973447ac8b76feadb9e3dde78d23 676 Pfam PF00271 Helicase conserved C-terminal domain 444 547 4.4E-17 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_06650 619b973447ac8b76feadb9e3dde78d23 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 7 667 43.665 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 TVD_06650 619b973447ac8b76feadb9e3dde78d23 676 Gene3D G3DSA:4.10.860.10 616 671 6.3E-12 T 11-10-2018 TVD_06650 619b973447ac8b76feadb9e3dde78d23 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 8 665 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 TVD_06650 619b973447ac8b76feadb9e3dde78d23 676 SMART SM00490 463 549 8.7E-20 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_06650 619b973447ac8b76feadb9e3dde78d23 676 Pfam PF02151 UvrB/uvrC motif 633 666 2.2E-6 T 11-10-2018 IPR001943 UVR domain GO:0005515 TVD_06650 619b973447ac8b76feadb9e3dde78d23 676 SMART SM00487 13 428 5.1E-27 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_05275 ab82147a1180377be77f8393fb27a9c0 1230 SUPERFAMILY SSF52540 16 851 1.32E-108 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_05275 ab82147a1180377be77f8393fb27a9c0 1230 Gene3D G3DSA:3.40.50.300 8 455 1.1E-133 T 11-10-2018 TVD_05275 ab82147a1180377be77f8393fb27a9c0 1230 Gene3D G3DSA:3.90.320.10 924 1227 1.1E-81 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal TVD_05275 ab82147a1180377be77f8393fb27a9c0 1230 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1221 21.635 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 TVD_05275 ab82147a1180377be77f8393fb27a9c0 1230 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 8 1217 0.0 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 TVD_05275 ab82147a1180377be77f8393fb27a9c0 1230 Pfam PF13361 UvrD-like helicase C-terminal domain 708 846 1.3E-13 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TVD_05275 ab82147a1180377be77f8393fb27a9c0 1230 Pfam PF00580 UvrD/REP helicase N-terminal domain 15 453 1.5E-55 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TVD_05275 ab82147a1180377be77f8393fb27a9c0 1230 Gene3D G3DSA:1.10.486.10 611 756 1.1E-151 T 11-10-2018 TVD_05275 ab82147a1180377be77f8393fb27a9c0 1230 Gene3D G3DSA:3.40.50.300 466 873 1.1E-151 T 11-10-2018 TVD_05275 ab82147a1180377be77f8393fb27a9c0 1230 SUPERFAMILY SSF52980 931 1220 4.24E-68 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TVD_05275 ab82147a1180377be77f8393fb27a9c0 1230 Gene3D G3DSA:1.10.3170.10 162 365 1.1E-133 T 11-10-2018 TVD_05275 ab82147a1180377be77f8393fb27a9c0 1230 Pfam PF12705 PD-(D/E)XK nuclease superfamily 995 1194 2.1E-7 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type TVD_12930 a2fd4a436b61ef295a6ffd3485ef5d62 336 SUPERFAMILY SSF102114 13 300 1.44E-78 T 11-10-2018 TVD_12930 a2fd4a436b61ef295a6ffd3485ef5d62 336 Pfam PF04055 Radical SAM superfamily 27 186 1.0E-28 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TVD_12930 a2fd4a436b61ef295a6ffd3485ef5d62 336 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 13 336 39.282 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TVD_12930 a2fd4a436b61ef295a6ffd3485ef5d62 336 Pfam PF13353 4Fe-4S single cluster domain 29 92 1.9E-6 T 11-10-2018 TVD_12930 a2fd4a436b61ef295a6ffd3485ef5d62 336 SMART SM00729 22 226 1.9E-15 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TVD_12930 a2fd4a436b61ef295a6ffd3485ef5d62 336 Pfam PF06463 Molybdenum Cofactor Synthesis C 193 320 8.2E-37 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TVD_12930 a2fd4a436b61ef295a6ffd3485ef5d62 336 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 28 39 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TVD_12930 a2fd4a436b61ef295a6ffd3485ef5d62 336 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 13 336 1.5E-116 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TVD_12930 a2fd4a436b61ef295a6ffd3485ef5d62 336 Gene3D G3DSA:3.20.20.70 10 336 2.7E-92 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_05900 04c57f9c78f08ac70a9d7621bf91b52e 466 Gene3D G3DSA:3.90.640.10 266 345 5.4E-10 T 11-10-2018 TVD_05900 04c57f9c78f08ac70a9d7621bf91b52e 466 Gene3D G3DSA:3.30.420.40 220 395 5.4E-10 T 11-10-2018 TVD_05900 04c57f9c78f08ac70a9d7621bf91b52e 466 Gene3D G3DSA:3.30.420.40 202 219 5.4E-10 T 11-10-2018 TVD_05900 04c57f9c78f08ac70a9d7621bf91b52e 466 SUPERFAMILY SSF53067 219 436 8.55E-14 T 11-10-2018 TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 SUPERFAMILY SSF58104 228 429 1.11E-42 T 11-10-2018 TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 149 259 2.3E-14 T 11-10-2018 IPR000014 PAS domain TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 29 137 1.1E-15 T 11-10-2018 IPR000014 PAS domain TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 SUPERFAMILY SSF55785 30 131 5.76E-22 T 11-10-2018 IPR035965 PAS domain superfamily TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 Gene3D G3DSA:3.30.450.20 17 144 7.4E-23 T 11-10-2018 TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 SUPERFAMILY SSF55785 151 251 5.23E-22 T 11-10-2018 IPR035965 PAS domain superfamily TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 SMART SM00091 17 87 0.27 T 11-10-2018 IPR000014 PAS domain TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 SMART SM00091 139 210 0.04 T 11-10-2018 IPR000014 PAS domain TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 SMART SM00283 236 430 7.9E-6 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 Pfam PF08447 PAS fold 43 126 6.8E-13 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 Pfam PF08447 PAS fold 164 247 3.8E-12 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 Gene3D G3DSA:1.10.287.950 252 432 3.9E-37 T 11-10-2018 TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 Gene3D G3DSA:3.30.450.20 150 251 2.0E-19 T 11-10-2018 TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 297 428 4.5E-27 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 SMART SM00086 92 134 0.0048 T 11-10-2018 IPR001610 PAC motif TVD_08960 83b87c7460666b85a2ae7aacd01db190 434 SMART SM00086 212 254 1.4E-5 T 11-10-2018 IPR001610 PAC motif TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.1E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.1E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.1E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 4.1E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.1E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 486 504 4.1E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 4.1E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 SUPERFAMILY SSF50677 226 414 1.03E-54 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 861 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 3.3E-73 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 Gene3D G3DSA:3.40.50.620 33 566 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 Gene3D G3DSA:3.10.20.590 800 862 8.1E-22 T 11-10-2018 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 Gene3D G3DSA:3.10.330.110 567 629 0.0 T 11-10-2018 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 SUPERFAMILY SSF47323 663 861 2.24E-38 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 Gene3D G3DSA:1.10.730.10 9 792 0.0 T 11-10-2018 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 571 1.0E-6 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 6.4E-28 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 860 23.619 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 Pfam PF08264 Anticodon-binding domain of tRNA 700 824 1.2E-17 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 Gene3D G3DSA:3.90.740.10 227 413 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 TVD_02540 e7021d2c5671cdb2de20987ba9213dc2 863 SUPERFAMILY SSF52374 5 669 1.15E-148 T 11-10-2018 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 Pfam PF03484 tRNA synthetase B5 domain 409 473 2.0E-19 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 SMART SM00896 693 786 4.9E-37 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 Gene3D G3DSA:3.30.70.380 694 787 3.5E-27 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 Gene3D G3DSA:2.40.50.140 39 154 1.4E-69 T 11-10-2018 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 SUPERFAMILY SSF54991 688 786 5.49E-28 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 786 2.9E-237 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 SUPERFAMILY SSF50249 38 197 3.67E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 SUPERFAMILY SSF46955 408 477 2.75E-16 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 SMART SM00874 405 473 4.0E-23 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 SMART SM00873 212 387 1.3E-86 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 Pfam PF03147 Ferredoxin-fold anticodon binding domain 693 786 1.2E-25 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 Gene3D G3DSA:3.30.56.10 4 181 1.4E-69 T 11-10-2018 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 Gene3D G3DSA:3.30.930.10 493 683 2.2E-55 T 11-10-2018 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 Pfam PF01588 Putative tRNA binding domain 45 145 3.1E-24 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 SUPERFAMILY SSF55681 469 681 9.44E-47 T 11-10-2018 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 780 43.059 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 Gene3D G3DSA:3.30.56.10 405 477 1.6E-23 T 11-10-2018 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 SUPERFAMILY SSF56037 199 395 4.45E-66 T 11-10-2018 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 Gene3D G3DSA:3.50.40.10 197 396 6.2E-74 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 TVD_07960 1ea9908b9aaa57b01c08c9635564ccaf 787 Pfam PF03483 B3/4 domain 212 387 4.4E-64 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 TVD_12010 a96141ef35c4e95386f49f673ff9d8d8 465 SUPERFAMILY SSF53244 321 460 3.66E-34 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TVD_12010 a96141ef35c4e95386f49f673ff9d8d8 465 SUPERFAMILY SSF53623 96 319 1.27E-49 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TVD_12010 a96141ef35c4e95386f49f673ff9d8d8 465 Pfam PF02875 Mur ligase family, glutamate ligase domain 322 373 2.8E-7 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TVD_12010 a96141ef35c4e95386f49f673ff9d8d8 465 Gene3D G3DSA:3.40.1190.10 95 322 1.5E-53 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TVD_12010 a96141ef35c4e95386f49f673ff9d8d8 465 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 4 461 56.683 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 TVD_12010 a96141ef35c4e95386f49f673ff9d8d8 465 Pfam PF01225 Mur ligase family, catalytic domain 6 103 8.4E-16 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TVD_12010 a96141ef35c4e95386f49f673ff9d8d8 465 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 6 461 6.7E-194 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 TVD_12010 a96141ef35c4e95386f49f673ff9d8d8 465 Gene3D G3DSA:3.40.50.720 3 92 2.9E-30 T 11-10-2018 TVD_12010 a96141ef35c4e95386f49f673ff9d8d8 465 Pfam PF08245 Mur ligase middle domain 110 302 4.6E-20 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TVD_12010 a96141ef35c4e95386f49f673ff9d8d8 465 SUPERFAMILY SSF51984 6 91 2.22E-21 T 11-10-2018 TVD_12010 a96141ef35c4e95386f49f673ff9d8d8 465 Gene3D G3DSA:3.90.190.20 325 462 7.7E-26 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TVD_02835 77e37c3ec708f10efd6e0c55d8a30030 110 Pfam PF12321 Protein of unknown function (DUF3634) 14 97 6.1E-17 T 11-10-2018 IPR022090 Protein of unknown function DUF3634 TVD_08905 f6c9764758a82b63fb51b55f1efd4edd 308 Pfam PF01734 Patatin-like phospholipase 34 206 2.2E-21 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 TVD_08905 f6c9764758a82b63fb51b55f1efd4edd 308 Gene3D G3DSA:3.40.1090.10 17 114 7.5E-20 T 11-10-2018 TVD_08905 f6c9764758a82b63fb51b55f1efd4edd 308 Gene3D G3DSA:3.40.1090.10 119 258 4.6E-17 T 11-10-2018 TVD_08905 f6c9764758a82b63fb51b55f1efd4edd 308 SUPERFAMILY SSF52151 30 256 2.56E-48 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TVD_02000 0c40a6419651a0fcfee04ffc9f553412 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 88 5.2E-9 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TVD_02000 0c40a6419651a0fcfee04ffc9f553412 99 Gene3D G3DSA:3.30.2310.20 1 89 1.0E-8 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_13055 51dd36eb9d0b3b0c2d7d682c459e2fab 546 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 TVD_13055 51dd36eb9d0b3b0c2d7d682c459e2fab 546 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 171 3.3E-53 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TVD_13055 51dd36eb9d0b3b0c2d7d682c459e2fab 546 SUPERFAMILY SSF52467 182 360 7.77E-42 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TVD_13055 51dd36eb9d0b3b0c2d7d682c459e2fab 546 SUPERFAMILY SSF52518 3 177 8.41E-52 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TVD_13055 51dd36eb9d0b3b0c2d7d682c459e2fab 546 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 4.8E-41 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TVD_13055 51dd36eb9d0b3b0c2d7d682c459e2fab 546 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 190 323 2.9E-34 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 TVD_13055 51dd36eb9d0b3b0c2d7d682c459e2fab 546 Gene3D G3DSA:3.40.50.1220 183 348 5.5E-48 T 11-10-2018 TVD_13055 51dd36eb9d0b3b0c2d7d682c459e2fab 546 Gene3D G3DSA:3.40.50.970 2 181 7.8E-63 T 11-10-2018 TVD_13055 51dd36eb9d0b3b0c2d7d682c459e2fab 546 Gene3D G3DSA:3.40.50.970 351 541 1.4E-56 T 11-10-2018 TVD_13055 51dd36eb9d0b3b0c2d7d682c459e2fab 546 SUPERFAMILY SSF52518 356 541 1.03E-56 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TVD_09900 a673f60088c79e8ba9604a16d1b6d669 578 Gene3D G3DSA:3.30.565.10 438 578 1.5E-5 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_09900 a673f60088c79e8ba9604a16d1b6d669 578 Pfam PF00860 Permease family 23 396 1.9E-46 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 TVD_09900 a673f60088c79e8ba9604a16d1b6d669 578 Pfam PF13581 Histidine kinase-like ATPase domain 447 561 6.2E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_03335 3347b10df45ebd370270debd39e29f70 141 Gene3D G3DSA:3.90.280.10 1 130 3.2E-36 T 11-10-2018 IPR036610 PEBP-like superfamily TVD_03335 3347b10df45ebd370270debd39e29f70 141 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 13 127 4.4E-24 T 11-10-2018 IPR005247 YbhB/YbcL TVD_03335 3347b10df45ebd370270debd39e29f70 141 Pfam PF01161 Phosphatidylethanolamine-binding protein 8 128 7.8E-27 T 11-10-2018 IPR008914 Phosphatidylethanolamine-binding protein TVD_03335 3347b10df45ebd370270debd39e29f70 141 SUPERFAMILY SSF49777 10 127 4.19E-31 T 11-10-2018 IPR036610 PEBP-like superfamily TVD_13005 cdd181e5f7206dac09ff2353120f5927 130 Gene3D G3DSA:2.20.130.30 55 130 1.2E-22 T 11-10-2018 TVD_13005 cdd181e5f7206dac09ff2353120f5927 130 Pfam PF11191 Protein of unknown function (DUF2782) 46 130 6.0E-24 T 11-10-2018 IPR021357 Protein of unknown function DUF2782 TVD_09850 c336dee458367c5ab7a461c209f4c45a 466 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TVD_09850 c336dee458367c5ab7a461c209f4c45a 466 Pfam PF00158 Sigma-54 interaction domain 147 309 9.7E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TVD_09850 c336dee458367c5ab7a461c209f4c45a 466 Gene3D G3DSA:1.10.10.60 424 465 9.2E-13 T 11-10-2018 TVD_09850 c336dee458367c5ab7a461c209f4c45a 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TVD_09850 c336dee458367c5ab7a461c209f4c45a 466 SUPERFAMILY SSF52540 147 372 1.15E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_09850 c336dee458367c5ab7a461c209f4c45a 466 SMART SM00382 163 306 8.8E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_09850 c336dee458367c5ab7a461c209f4c45a 466 SUPERFAMILY SSF46689 349 465 1.94E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_09850 c336dee458367c5ab7a461c209f4c45a 466 Gene3D G3DSA:1.10.8.60 315 384 4.9E-9 T 11-10-2018 TVD_09850 c336dee458367c5ab7a461c209f4c45a 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 1.4E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_09850 c336dee458367c5ab7a461c209f4c45a 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 466 1.4E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_09850 c336dee458367c5ab7a461c209f4c45a 466 Gene3D G3DSA:3.40.50.300 131 314 8.9E-62 T 11-10-2018 TVD_09850 c336dee458367c5ab7a461c209f4c45a 466 Pfam PF02954 Bacterial regulatory protein, Fis family 427 463 2.9E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_12320 9dc08310a4f3d0abd0cf137d6f041e82 772 Gene3D G3DSA:3.40.30.10 642 767 2.9E-31 T 11-10-2018 TVD_12320 9dc08310a4f3d0abd0cf137d6f041e82 772 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 135 768 34.733 T 11-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 TVD_12320 9dc08310a4f3d0abd0cf137d6f041e82 772 Pfam PF13899 Thioredoxin-like 658 740 6.1E-15 T 11-10-2018 TVD_12320 9dc08310a4f3d0abd0cf137d6f041e82 772 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 355 560 3.1E-16 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 TVD_12320 9dc08310a4f3d0abd0cf137d6f041e82 772 SUPERFAMILY SSF74863 28 144 4.84E-32 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily TVD_12320 9dc08310a4f3d0abd0cf137d6f041e82 772 Pfam PF11412 Disulphide bond corrector protein DsbC 30 144 5.6E-31 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain TVD_12320 9dc08310a4f3d0abd0cf137d6f041e82 772 Pfam PF11412 Disulphide bond corrector protein DsbC 183 300 3.0E-31 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain TVD_12320 9dc08310a4f3d0abd0cf137d6f041e82 772 Gene3D G3DSA:2.60.40.1250 22 156 1.4E-38 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily TVD_12320 9dc08310a4f3d0abd0cf137d6f041e82 772 Gene3D G3DSA:2.60.40.1250 178 316 2.2E-35 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily TVD_12320 9dc08310a4f3d0abd0cf137d6f041e82 772 SUPERFAMILY SSF74863 182 301 8.37E-32 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily TVD_12320 9dc08310a4f3d0abd0cf137d6f041e82 772 SUPERFAMILY SSF52833 655 765 2.46E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_07225 c96cea771b6f598b62423880abfc46f8 260 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 255 40.472 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 TVD_07225 c96cea771b6f598b62423880abfc46f8 260 SUPERFAMILY SSF51161 2 254 6.48E-68 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily TVD_07225 c96cea771b6f598b62423880abfc46f8 260 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 253 5.5E-19 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 TVD_07225 c96cea771b6f598b62423880abfc46f8 260 Gene3D G3DSA:2.160.10.10 1 191 9.3E-50 T 11-10-2018 TVD_07225 c96cea771b6f598b62423880abfc46f8 260 Gene3D G3DSA:1.20.1180.10 192 256 9.1E-12 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 TVD_07225 c96cea771b6f598b62423880abfc46f8 260 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 253 1.2E-94 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 TVD_07225 c96cea771b6f598b62423880abfc46f8 260 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 2 30 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 TVD_07225 c96cea771b6f598b62423880abfc46f8 260 PIRSF PIRSF000456 1 260 5.0E-98 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 TVD_07225 c96cea771b6f598b62423880abfc46f8 260 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 46 4.1E-8 T 11-10-2018 IPR001451 Hexapeptide repeat TVD_07225 c96cea771b6f598b62423880abfc46f8 260 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 128 3.1E-6 T 11-10-2018 IPR001451 Hexapeptide repeat TVD_00860 681b5474bcbce14a05e59280d49471d1 828 PIRSF PIRSF000460 2 827 4.8E-219 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 TVD_00860 681b5474bcbce14a05e59280d49471d1 828 SUPERFAMILY SSF53756 12 816 0.0 T 11-10-2018 TVD_00860 681b5474bcbce14a05e59280d49471d1 828 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 659 671 - T 11-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 TVD_00860 681b5474bcbce14a05e59280d49471d1 828 Gene3D G3DSA:3.40.50.2000 15 479 3.2E-210 T 11-10-2018 TVD_00860 681b5474bcbce14a05e59280d49471d1 828 Pfam PF00343 Carbohydrate phosphorylase 105 814 0.0 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 TVD_00860 681b5474bcbce14a05e59280d49471d1 828 Gene3D G3DSA:3.40.50.2000 480 799 3.4E-132 T 11-10-2018 TVD_00860 681b5474bcbce14a05e59280d49471d1 828 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 16 814 0.0 T 11-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 TVD_10830 be716f5ab674d5c1f09c4130267f59f8 490 Gene3D G3DSA:3.30.870.10 124 308 4.3E-42 T 11-10-2018 TVD_10830 be716f5ab674d5c1f09c4130267f59f8 490 Pfam PF13091 PLD-like domain 332 457 2.2E-22 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TVD_10830 be716f5ab674d5c1f09c4130267f59f8 490 Pfam PF13091 PLD-like domain 147 288 8.8E-8 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TVD_10830 be716f5ab674d5c1f09c4130267f59f8 490 SMART SM00155 228 255 0.017 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TVD_10830 be716f5ab674d5c1f09c4130267f59f8 490 SMART SM00155 403 430 0.016 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TVD_10830 be716f5ab674d5c1f09c4130267f59f8 490 SUPERFAMILY SSF56024 117 319 8.16E-51 T 11-10-2018 TVD_10830 be716f5ab674d5c1f09c4130267f59f8 490 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 24 490 2.5E-117 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 TVD_10830 be716f5ab674d5c1f09c4130267f59f8 490 SUPERFAMILY SSF56024 280 477 1.57E-45 T 11-10-2018 TVD_10830 be716f5ab674d5c1f09c4130267f59f8 490 Gene3D G3DSA:3.30.870.10 309 487 3.3E-28 T 11-10-2018 TVD_10830 be716f5ab674d5c1f09c4130267f59f8 490 Hamap MF_00190 Cardiolipin synthase A [clsA]. 15 490 44.734 T 11-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 TVD_08975 342dcb03625f21f4e263bcda0addbfbb 413 Gene3D G3DSA:1.10.3210.10 31 328 1.0E-74 T 11-10-2018 TVD_08975 342dcb03625f21f4e263bcda0addbfbb 413 Pfam PF11871 Domain of unknown function (DUF3391) 2 131 1.0E-34 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 TVD_08975 342dcb03625f21f4e263bcda0addbfbb 413 SMART SM00471 160 297 7.2E-10 T 11-10-2018 IPR003607 HD/PDEase domain TVD_08975 342dcb03625f21f4e263bcda0addbfbb 413 TIGRFAM TIGR00277 HDIG: HDIG domain 164 240 5.2E-8 T 11-10-2018 IPR006675 HDIG domain TVD_08975 342dcb03625f21f4e263bcda0addbfbb 413 SUPERFAMILY SSF109604 159 326 7.4E-33 T 11-10-2018 TVD_08975 342dcb03625f21f4e263bcda0addbfbb 413 Pfam PF13487 HD domain 215 278 1.6E-15 T 11-10-2018 TVD_05845 2840a80959f090e63d1e6d5151d7e615 1052 Pfam PF14579 Helix-hairpin-helix motif 788 879 5.4E-22 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_05845 2840a80959f090e63d1e6d5151d7e615 1052 Gene3D G3DSA:3.20.20.140 2 270 9.8E-54 T 11-10-2018 TVD_05845 2840a80959f090e63d1e6d5151d7e615 1052 Pfam PF02811 PHP domain 25 129 2.2E-14 T 11-10-2018 IPR004013 PHP domain GO:0003824 TVD_05845 2840a80959f090e63d1e6d5151d7e615 1052 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 293 714 1.4E-146 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_05845 2840a80959f090e63d1e6d5151d7e615 1052 SMART SM00481 20 87 1.1E-13 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal TVD_05845 2840a80959f090e63d1e6d5151d7e615 1052 SUPERFAMILY SSF89550 26 123 1.63E-7 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 TVD_05845 2840a80959f090e63d1e6d5151d7e615 1052 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 21 997 5.0E-159 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_05845 2840a80959f090e63d1e6d5151d7e615 1052 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 19 1052 13.482 T 11-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TVD_06465 e9b75499288a9d3f075f0b82043c84ce 198 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 24 162 1.1E-46 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 TVD_10265 49f95af89190489a607a57fcc775daa0 56 Pfam PF00471 Ribosomal protein L33 9 54 1.8E-18 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10265 49f95af89190489a607a57fcc775daa0 56 SUPERFAMILY SSF57829 3 54 5.13E-20 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 TVD_10265 49f95af89190489a607a57fcc775daa0 56 Gene3D G3DSA:2.20.28.120 1 56 2.1E-29 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10265 49f95af89190489a607a57fcc775daa0 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_10265 49f95af89190489a607a57fcc775daa0 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 7.1E-28 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10265 49f95af89190489a607a57fcc775daa0 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 15.576 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_01565 8dd0eba0d2af2919b9272bd69bdb12d5 238 SMART SM00862 147 222 1.3E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TVD_01565 8dd0eba0d2af2919b9272bd69bdb12d5 238 SMART SM00448 3 114 6.6E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_01565 8dd0eba0d2af2919b9272bd69bdb12d5 238 Gene3D G3DSA:3.40.50.2300 1 123 3.7E-39 T 11-10-2018 TVD_01565 8dd0eba0d2af2919b9272bd69bdb12d5 238 Gene3D G3DSA:1.10.10.10 124 237 5.5E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_01565 8dd0eba0d2af2919b9272bd69bdb12d5 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 6.2E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TVD_01565 8dd0eba0d2af2919b9272bd69bdb12d5 238 SUPERFAMILY SSF52172 3 176 1.9E-39 T 11-10-2018 IPR011006 CheY-like superfamily TVD_01565 8dd0eba0d2af2919b9272bd69bdb12d5 238 Pfam PF00072 Response regulator receiver domain 5 114 1.0E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_00505 9c657d142c1deebdfaa064f007a02509 240 Gene3D G3DSA:3.30.450.40 9 172 4.5E-24 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_00505 9c657d142c1deebdfaa064f007a02509 240 SMART SM00065 24 176 5.0E-14 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_00505 9c657d142c1deebdfaa064f007a02509 240 SUPERFAMILY SSF55781 10 166 4.58E-22 T 11-10-2018 TVD_00505 9c657d142c1deebdfaa064f007a02509 240 Pfam PF01590 GAF domain 25 165 2.7E-11 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_05635 7b88afc9a762578a5badbd2b688bc4b9 622 Gene3D G3DSA:1.20.1640.10 454 608 2.4E-11 T 11-10-2018 TVD_05635 7b88afc9a762578a5badbd2b688bc4b9 622 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 621 47.325 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 TVD_05635 7b88afc9a762578a5badbd2b688bc4b9 622 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 124 607 2.1E-146 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 TVD_05635 7b88afc9a762578a5badbd2b688bc4b9 622 Gene3D G3DSA:3.30.70.3400 226 444 2.9E-47 T 11-10-2018 TVD_05635 7b88afc9a762578a5badbd2b688bc4b9 622 Gene3D G3DSA:3.30.1360.200 282 438 2.9E-47 T 11-10-2018 TVD_05635 7b88afc9a762578a5badbd2b688bc4b9 622 Pfam PF02355 Protein export membrane protein 440 608 1.2E-22 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial TVD_05635 7b88afc9a762578a5badbd2b688bc4b9 622 SUPERFAMILY SSF82866 339 614 2.09E-47 T 11-10-2018 TVD_05635 7b88afc9a762578a5badbd2b688bc4b9 622 PRINTS PR00702 Acriflavin resistance protein family signature 584 607 1.1E-9 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_05635 7b88afc9a762578a5badbd2b688bc4b9 622 PRINTS PR00702 Acriflavin resistance protein family signature 509 533 1.1E-9 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_05635 7b88afc9a762578a5badbd2b688bc4b9 622 PRINTS PR00702 Acriflavin resistance protein family signature 456 479 1.1E-9 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_05635 7b88afc9a762578a5badbd2b688bc4b9 622 Pfam PF07549 SecD/SecF GG Motif 119 139 1.5E-4 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site TVD_05635 7b88afc9a762578a5badbd2b688bc4b9 622 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 351 600 2.0E-79 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TVD_05635 7b88afc9a762578a5badbd2b688bc4b9 622 Pfam PF13721 SecD export protein N-terminal TM region 3 104 3.1E-24 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain TVD_13765 7140be59995d29f699e9018dc11ca516 413 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 9 405 4.3E-110 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 TVD_13765 7140be59995d29f699e9018dc11ca516 413 SUPERFAMILY SSF53187 3 410 3.14E-79 T 11-10-2018 TVD_13765 7140be59995d29f699e9018dc11ca516 413 Pfam PF07687 Peptidase dimerisation domain 213 313 7.8E-5 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain TVD_13765 7140be59995d29f699e9018dc11ca516 413 Gene3D G3DSA:3.40.630.10 22 403 3.6E-126 T 11-10-2018 TVD_13765 7140be59995d29f699e9018dc11ca516 413 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 77 86 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 TVD_13765 7140be59995d29f699e9018dc11ca516 413 Gene3D G3DSA:3.30.70.360 213 328 3.6E-126 T 11-10-2018 TVD_13765 7140be59995d29f699e9018dc11ca516 413 Pfam PF01546 Peptidase family M20/M25/M40 79 403 4.4E-30 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 TVD_13765 7140be59995d29f699e9018dc11ca516 413 PIRSF PIRSF001235 4 413 1.9E-136 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 TVD_13765 7140be59995d29f699e9018dc11ca516 413 SUPERFAMILY SSF55031 213 330 5.93E-23 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain TVD_09630 3bb632fdb79a12bac3aaaf317c8f0c71 443 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 324 441 6.7E-13 T 11-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 TVD_09630 3bb632fdb79a12bac3aaaf317c8f0c71 443 SUPERFAMILY SSF56524 84 311 8.63E-55 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 TVD_09630 3bb632fdb79a12bac3aaaf317c8f0c71 443 Gene3D G3DSA:2.60.40.650 326 442 2.2E-28 T 11-10-2018 TVD_09630 3bb632fdb79a12bac3aaaf317c8f0c71 443 Pfam PF00174 Oxidoreductase molybdopterin binding domain 127 295 4.0E-45 T 11-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 TVD_09630 3bb632fdb79a12bac3aaaf317c8f0c71 443 Gene3D G3DSA:3.90.420.10 69 322 2.1E-61 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 TVD_09630 3bb632fdb79a12bac3aaaf317c8f0c71 443 SUPERFAMILY SSF81296 326 441 1.75E-27 T 11-10-2018 IPR014756 Immunoglobulin E-set TVD_09630 3bb632fdb79a12bac3aaaf317c8f0c71 443 PRINTS PR00407 Eukaryotic molybdopterin domain signature 106 122 8.1E-19 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 TVD_09630 3bb632fdb79a12bac3aaaf317c8f0c71 443 PRINTS PR00407 Eukaryotic molybdopterin domain signature 243 259 8.1E-19 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 TVD_09630 3bb632fdb79a12bac3aaaf317c8f0c71 443 PRINTS PR00407 Eukaryotic molybdopterin domain signature 187 202 8.1E-19 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 TVD_09630 3bb632fdb79a12bac3aaaf317c8f0c71 443 PRINTS PR00407 Eukaryotic molybdopterin domain signature 324 336 8.1E-19 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 TVD_09630 3bb632fdb79a12bac3aaaf317c8f0c71 443 PRINTS PR00407 Eukaryotic molybdopterin domain signature 363 375 8.1E-19 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 TVD_09630 3bb632fdb79a12bac3aaaf317c8f0c71 443 PRINTS PR00407 Eukaryotic molybdopterin domain signature 260 273 8.1E-19 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 TVD_09630 3bb632fdb79a12bac3aaaf317c8f0c71 443 PRINTS PR00407 Eukaryotic molybdopterin domain signature 276 289 8.1E-19 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 TVD_08775 feee20505e2640c8249fc1dd3fb5db2c 425 Gene3D G3DSA:3.20.20.450 167 418 1.2E-83 T 11-10-2018 IPR035919 EAL domain superfamily TVD_08775 feee20505e2640c8249fc1dd3fb5db2c 425 SUPERFAMILY SSF55073 3 149 1.49E-10 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_08775 feee20505e2640c8249fc1dd3fb5db2c 425 Gene3D G3DSA:3.30.70.270 2 165 1.3E-17 T 11-10-2018 TVD_08775 feee20505e2640c8249fc1dd3fb5db2c 425 SUPERFAMILY SSF141868 171 416 5.89E-74 T 11-10-2018 IPR035919 EAL domain superfamily TVD_08775 feee20505e2640c8249fc1dd3fb5db2c 425 Pfam PF00563 EAL domain 171 406 5.9E-66 T 11-10-2018 IPR001633 EAL domain TVD_08775 feee20505e2640c8249fc1dd3fb5db2c 425 Pfam PF00990 Diguanylate cyclase, GGDEF domain 25 149 1.2E-5 T 11-10-2018 IPR000160 GGDEF domain TVD_08775 feee20505e2640c8249fc1dd3fb5db2c 425 SMART SM00052 165 411 3.0E-83 T 11-10-2018 IPR001633 EAL domain TVD_08775 feee20505e2640c8249fc1dd3fb5db2c 425 SMART SM00267 1 155 0.0026 T 11-10-2018 IPR000160 GGDEF domain TVD_01915 9c5e4566eb942468cc5a6eca58c9440b 310 SUPERFAMILY SSF51735 1 307 2.58E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_01915 9c5e4566eb942468cc5a6eca58c9440b 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 229 1.0E-25 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TVD_01915 9c5e4566eb942468cc5a6eca58c9440b 310 Gene3D G3DSA:3.40.50.720 1 309 3.2E-48 T 11-10-2018 TVD_07860 27ac5ec78623d84df567917fa64b5b61 418 SUPERFAMILY SSF64518 1 418 3.66E-81 T 11-10-2018 TVD_07860 27ac5ec78623d84df567917fa64b5b61 418 PRINTS PR00207 Flagellin signature 35 52 4.1E-6 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TVD_07860 27ac5ec78623d84df567917fa64b5b61 418 PRINTS PR00207 Flagellin signature 74 93 4.1E-6 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TVD_07860 27ac5ec78623d84df567917fa64b5b61 418 PRINTS PR00207 Flagellin signature 109 132 4.1E-6 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TVD_07860 27ac5ec78623d84df567917fa64b5b61 418 Gene3D G3DSA:1.20.1330.10 40 213 1.0E-47 T 11-10-2018 TVD_07860 27ac5ec78623d84df567917fa64b5b61 418 Gene3D G3DSA:1.20.1330.10 232 365 7.9E-7 T 11-10-2018 TVD_07860 27ac5ec78623d84df567917fa64b5b61 418 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 418 2.1E-88 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 TVD_07860 27ac5ec78623d84df567917fa64b5b61 418 Gene3D G3DSA:1.10.8.410 371 414 2.1E-6 T 11-10-2018 TVD_07860 27ac5ec78623d84df567917fa64b5b61 418 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 3.7E-23 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TVD_07860 27ac5ec78623d84df567917fa64b5b61 418 Pfam PF00700 Bacterial flagellin C-terminal helical region 337 418 9.5E-8 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TVD_07085 eea37a9e9ae3ebc89faa45c129a2abdc 494 Gene3D G3DSA:3.40.50.300 3 235 7.7E-57 T 11-10-2018 TVD_07085 eea37a9e9ae3ebc89faa45c129a2abdc 494 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 230 4.7E-22 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TVD_07085 eea37a9e9ae3ebc89faa45c129a2abdc 494 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 481 4.1E-146 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 TVD_07085 eea37a9e9ae3ebc89faa45c129a2abdc 494 SUPERFAMILY SSF52540 1 238 2.92E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_07085 eea37a9e9ae3ebc89faa45c129a2abdc 494 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 488 208.06 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 TVD_07085 eea37a9e9ae3ebc89faa45c129a2abdc 494 SUPERFAMILY SSF52317 192 396 2.29E-39 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_07085 eea37a9e9ae3ebc89faa45c129a2abdc 494 Gene3D G3DSA:3.40.50.880 257 398 1.0E-19 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_07085 eea37a9e9ae3ebc89faa45c129a2abdc 494 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 436 2.5E-58 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 TVD_03085 83023cd4f2ddd13a6ee9d2587d947fe7 106 Gene3D G3DSA:4.10.490.10 38 106 4.5E-17 T 11-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 TVD_03085 83023cd4f2ddd13a6ee9d2587d947fe7 106 SUPERFAMILY SSF57652 39 104 1.83E-15 T 11-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 TVD_03085 83023cd4f2ddd13a6ee9d2587d947fe7 106 Pfam PF01355 High potential iron-sulfur protein 41 103 1.3E-15 T 11-10-2018 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 TVD_06885 ad79cf2d973cba32b44c3eeb7bb2c072 751 SUPERFAMILY SSF141868 510 738 8.24E-58 T 11-10-2018 IPR035919 EAL domain superfamily TVD_06885 ad79cf2d973cba32b44c3eeb7bb2c072 751 Gene3D G3DSA:3.20.20.450 497 742 4.8E-63 T 11-10-2018 IPR035919 EAL domain superfamily TVD_06885 ad79cf2d973cba32b44c3eeb7bb2c072 751 SUPERFAMILY SSF55073 326 485 3.92E-42 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_06885 ad79cf2d973cba32b44c3eeb7bb2c072 751 Pfam PF00563 EAL domain 501 731 1.8E-54 T 11-10-2018 IPR001633 EAL domain TVD_06885 ad79cf2d973cba32b44c3eeb7bb2c072 751 Pfam PF00990 Diguanylate cyclase, GGDEF domain 321 477 1.2E-41 T 11-10-2018 IPR000160 GGDEF domain TVD_06885 ad79cf2d973cba32b44c3eeb7bb2c072 751 SMART SM00052 495 736 8.1E-45 T 11-10-2018 IPR001633 EAL domain TVD_06885 ad79cf2d973cba32b44c3eeb7bb2c072 751 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 320 481 8.1E-38 T 11-10-2018 IPR000160 GGDEF domain TVD_06885 ad79cf2d973cba32b44c3eeb7bb2c072 751 SMART SM00267 310 483 2.3E-47 T 11-10-2018 IPR000160 GGDEF domain TVD_06885 ad79cf2d973cba32b44c3eeb7bb2c072 751 Gene3D G3DSA:3.30.70.270 307 484 5.5E-48 T 11-10-2018 TVD_01630 8dc067693aa89aa1dd71deda00b1720d 252 SUPERFAMILY SSF53218 10 206 5.1E-28 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily TVD_01630 8dc067693aa89aa1dd71deda00b1720d 252 SMART SM00852 12 172 2.6E-22 T 11-10-2018 IPR001453 MoaB/Mog domain TVD_01630 8dc067693aa89aa1dd71deda00b1720d 252 Gene3D G3DSA:3.40.980.10 9 169 4.5E-38 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily TVD_01630 8dc067693aa89aa1dd71deda00b1720d 252 Pfam PF00994 Probable molybdopterin binding domain 13 167 2.8E-23 T 11-10-2018 IPR001453 MoaB/Mog domain TVD_12955 9df661c564c5f5b1ef22b301aa1c9fd6 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 150 161 3.3E-12 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 TVD_12955 9df661c564c5f5b1ef22b301aa1c9fd6 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 89 99 3.3E-12 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 TVD_12955 9df661c564c5f5b1ef22b301aa1c9fd6 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 223 235 3.3E-12 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 TVD_12955 9df661c564c5f5b1ef22b301aa1c9fd6 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 341 349 3.3E-12 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 TVD_12955 9df661c564c5f5b1ef22b301aa1c9fd6 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 49 60 3.3E-12 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 TVD_12955 9df661c564c5f5b1ef22b301aa1c9fd6 349 PRINTS PR00184 Neisseria sp. porin signature 51 76 5.0E-9 T 11-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 TVD_12955 9df661c564c5f5b1ef22b301aa1c9fd6 349 PRINTS PR00184 Neisseria sp. porin signature 149 166 5.0E-9 T 11-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 TVD_12955 9df661c564c5f5b1ef22b301aa1c9fd6 349 PRINTS PR00184 Neisseria sp. porin signature 87 106 5.0E-9 T 11-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 TVD_12955 9df661c564c5f5b1ef22b301aa1c9fd6 349 PRINTS PR00184 Neisseria sp. porin signature 338 349 5.0E-9 T 11-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 TVD_12955 9df661c564c5f5b1ef22b301aa1c9fd6 349 Pfam PF13609 Gram-negative porin 13 315 8.2E-47 T 11-10-2018 TVD_12955 9df661c564c5f5b1ef22b301aa1c9fd6 349 Gene3D G3DSA:2.40.160.10 23 349 2.4E-64 T 11-10-2018 IPR023614 Porin domain superfamily TVD_12955 9df661c564c5f5b1ef22b301aa1c9fd6 349 SUPERFAMILY SSF56935 26 349 2.88E-57 T 11-10-2018 TVD_02025 a4df73d85b8e5980644a9d1f7df312f5 180 Gene3D G3DSA:3.30.70.260 2 81 5.6E-20 T 11-10-2018 TVD_02025 a4df73d85b8e5980644a9d1f7df312f5 180 Pfam PF13740 ACT domain 5 74 5.7E-15 T 11-10-2018 TVD_02025 a4df73d85b8e5980644a9d1f7df312f5 180 Pfam PF13740 ACT domain 90 168 3.2E-7 T 11-10-2018 TVD_02025 a4df73d85b8e5980644a9d1f7df312f5 180 SUPERFAMILY SSF55021 2 69 1.26E-11 T 11-10-2018 TVD_02025 a4df73d85b8e5980644a9d1f7df312f5 180 PIRSF PIRSF028103 1 173 1.9E-50 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 TVD_02025 a4df73d85b8e5980644a9d1f7df312f5 180 SUPERFAMILY SSF55021 87 167 2.6E-16 T 11-10-2018 TVD_02025 a4df73d85b8e5980644a9d1f7df312f5 180 Gene3D G3DSA:3.30.70.260 84 171 3.1E-24 T 11-10-2018 TVD_00470 0adb75e0e97dbcc375a9303ec7d9dffa 385 Pfam PF13480 Acetyltransferase (GNAT) domain 179 327 5.4E-21 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 TVD_00470 0adb75e0e97dbcc375a9303ec7d9dffa 385 SUPERFAMILY SSF55729 169 344 5.65E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_12885 478f2a1596890c1d0419da22cfc1b84a 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 6 235 1.0E-50 T 11-10-2018 TVD_12885 478f2a1596890c1d0419da22cfc1b84a 240 SUPERFAMILY SSF51735 1 238 2.52E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_12885 478f2a1596890c1d0419da22cfc1b84a 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TVD_12885 478f2a1596890c1d0419da22cfc1b84a 240 Gene3D G3DSA:3.40.50.720 1 238 1.2E-65 T 11-10-2018 TVD_12885 478f2a1596890c1d0419da22cfc1b84a 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.3E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_12885 478f2a1596890c1d0419da22cfc1b84a 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 3.3E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_12885 478f2a1596890c1d0419da22cfc1b84a 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 3.3E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_12885 478f2a1596890c1d0419da22cfc1b84a 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 17 3.3E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_12885 478f2a1596890c1d0419da22cfc1b84a 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 3.3E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_12885 478f2a1596890c1d0419da22cfc1b84a 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 3.3E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_12885 478f2a1596890c1d0419da22cfc1b84a 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 1.9E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_12885 478f2a1596890c1d0419da22cfc1b84a 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.9E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_12885 478f2a1596890c1d0419da22cfc1b84a 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.9E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_04570 617adfc2de2d966cdd96af03a6732fa2 215 Gene3D G3DSA:1.10.1670.10 11 203 8.3E-79 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 TVD_04570 617adfc2de2d966cdd96af03a6732fa2 215 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.8E-19 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TVD_04570 617adfc2de2d966cdd96af03a6732fa2 215 TIGRFAM TIGR01083 nth: endonuclease III 5 194 4.0E-87 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 TVD_04570 617adfc2de2d966cdd96af03a6732fa2 215 Gene3D G3DSA:1.10.340.30 21 132 8.3E-79 T 11-10-2018 TVD_04570 617adfc2de2d966cdd96af03a6732fa2 215 Hamap MF_00942 Endonuclease III [nth]. 3 209 38.436 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 TVD_04570 617adfc2de2d966cdd96af03a6732fa2 215 PIRSF PIRSF001435 1 210 9.2E-54 T 11-10-2018 TVD_04570 617adfc2de2d966cdd96af03a6732fa2 215 SMART SM00478 38 185 1.7E-59 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TVD_04570 617adfc2de2d966cdd96af03a6732fa2 215 SMART SM00525 186 206 4.4E-6 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 TVD_04570 617adfc2de2d966cdd96af03a6732fa2 215 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 TVD_04570 617adfc2de2d966cdd96af03a6732fa2 215 SUPERFAMILY SSF48150 3 208 8.48E-77 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TVD_04570 617adfc2de2d966cdd96af03a6732fa2 215 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.9E-6 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 TVD_04570 617adfc2de2d966cdd96af03a6732fa2 215 Pfam PF00633 Helix-hairpin-helix motif 99 127 6.2E-10 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 TVD_02575 72d1cd4f964b36a11ef87c35edc385fb 217 PIRSF PIRSF006305 2 194 1.9E-53 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 TVD_02575 72d1cd4f964b36a11ef87c35edc385fb 217 Hamap MF_00528 Septum formation protein Maf [maf]. 6 193 31.832 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 TVD_02575 72d1cd4f964b36a11ef87c35edc385fb 217 Gene3D G3DSA:3.90.950.10 2 190 3.0E-66 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TVD_02575 72d1cd4f964b36a11ef87c35edc385fb 217 TIGRFAM TIGR00172 maf: septum formation protein Maf 5 186 2.3E-49 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 TVD_02575 72d1cd4f964b36a11ef87c35edc385fb 217 Pfam PF02545 Maf-like protein 7 188 7.8E-56 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 TVD_02575 72d1cd4f964b36a11ef87c35edc385fb 217 SUPERFAMILY SSF52972 5 188 2.85E-62 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TVD_01395 2b3be2c77a813d2d02f8091cc5e02067 80 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 3 78 1.0E-16 T 11-10-2018 IPR027354 YcgL domain TVD_01395 2b3be2c77a813d2d02f8091cc5e02067 80 Pfam PF05166 YcgL domain 3 75 4.5E-28 T 11-10-2018 IPR027354 YcgL domain TVD_01395 2b3be2c77a813d2d02f8091cc5e02067 80 SUPERFAMILY SSF160191 1 79 1.09E-28 T 11-10-2018 IPR038068 YcgL-like superfamily TVD_01395 2b3be2c77a813d2d02f8091cc5e02067 80 Gene3D G3DSA:3.10.510.20 1 74 5.6E-27 T 11-10-2018 IPR038068 YcgL-like superfamily TVD_01395 2b3be2c77a813d2d02f8091cc5e02067 80 Hamap MF_01866 Protein YcgL [ycgL]. 1 80 22.253 T 11-10-2018 IPR027354 YcgL domain TVD_08260 78c855d7c5529c43fd5544f813b3b9d5 312 Gene3D G3DSA:1.10.4080.10 1 301 2.3E-97 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily TVD_08260 78c855d7c5529c43fd5544f813b3b9d5 312 Pfam PF03747 ADP-ribosylglycohydrolase 1 274 6.4E-64 T 11-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 TVD_08260 78c855d7c5529c43fd5544f813b3b9d5 312 SUPERFAMILY SSF101478 1 295 9.68E-70 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 Gene3D G3DSA:2.10.70.100 455 501 7.9E-18 T 11-10-2018 TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SUPERFAMILY SSF55785 369 498 2.62E-22 T 11-10-2018 IPR035965 PAS domain superfamily TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SMART SM00091 384 452 0.0069 T 11-10-2018 IPR000014 PAS domain TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SMART SM00091 507 574 0.0013 T 11-10-2018 IPR000014 PAS domain TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SMART SM00091 128 198 0.17 T 11-10-2018 IPR000014 PAS domain TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SMART SM00091 253 325 4.9 T 11-10-2018 IPR000014 PAS domain TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SMART SM00091 8 74 9.7E-4 T 11-10-2018 IPR000014 PAS domain TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 Gene3D G3DSA:3.30.450.20 124 245 6.2E-21 T 11-10-2018 TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 Pfam PF08448 PAS fold 14 125 7.3E-12 T 11-10-2018 IPR013656 PAS fold-4 TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 Gene3D G3DSA:3.30.70.270 622 788 1.3E-56 T 11-10-2018 TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SUPERFAMILY SSF55785 261 375 4.67E-16 T 11-10-2018 IPR035965 PAS domain superfamily TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 Pfam PF13426 PAS domain 519 619 6.8E-14 T 11-10-2018 IPR000014 PAS domain TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 628 789 8.8E-51 T 11-10-2018 IPR000160 GGDEF domain TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SMART SM00267 621 789 2.3E-65 T 11-10-2018 IPR000160 GGDEF domain TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 Gene3D G3DSA:3.30.450.20 5 123 1.9E-16 T 11-10-2018 TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 Gene3D G3DSA:3.30.450.20 251 370 1.8E-22 T 11-10-2018 TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 129 4.5E-15 T 11-10-2018 IPR000014 PAS domain TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 255 5.5E-8 T 11-10-2018 IPR000014 PAS domain TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 398 506 1.6E-9 T 11-10-2018 IPR000014 PAS domain TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 250 379 5.1E-8 T 11-10-2018 IPR000014 PAS domain TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 505 628 5.8E-21 T 11-10-2018 IPR000014 PAS domain TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 Pfam PF00990 Diguanylate cyclase, GGDEF domain 632 785 2.2E-44 T 11-10-2018 IPR000160 GGDEF domain TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 Gene3D G3DSA:3.30.450.20 382 451 2.0E-22 T 11-10-2018 TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SUPERFAMILY SSF55785 13 126 3.7E-17 T 11-10-2018 IPR035965 PAS domain superfamily TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 Pfam PF08447 PAS fold 281 362 1.4E-11 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 Pfam PF08447 PAS fold 407 494 4.5E-20 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 Pfam PF08447 PAS fold 155 241 7.4E-13 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 Gene3D G3DSA:3.30.450.20 503 621 3.2E-31 T 11-10-2018 TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SUPERFAMILY SSF55073 637 788 9.42E-46 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SMART SM00086 458 500 1.7E-8 T 11-10-2018 IPR001610 PAC motif TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SMART SM00086 206 248 1.1E-4 T 11-10-2018 IPR001610 PAC motif TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SMART SM00086 579 621 7.6E-7 T 11-10-2018 IPR001610 PAC motif TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SMART SM00086 81 123 0.088 T 11-10-2018 IPR001610 PAC motif TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SMART SM00086 331 372 0.0023 T 11-10-2018 IPR001610 PAC motif TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SUPERFAMILY SSF55785 516 618 7.33E-26 T 11-10-2018 IPR035965 PAS domain superfamily TVD_04125 0ff1a1e56e44204a5a486f59572579a7 790 SUPERFAMILY SSF55785 133 248 7.25E-16 T 11-10-2018 IPR035965 PAS domain superfamily TVD_05370 1d1de9d17c591c2f9734c7c5a7e677b9 421 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 13 414 51.312 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 TVD_05370 1d1de9d17c591c2f9734c7c5a7e677b9 421 SUPERFAMILY SSF51161 301 410 1.52E-20 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily TVD_05370 1d1de9d17c591c2f9734c7c5a7e677b9 421 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 343 375 0.0019 T 11-10-2018 IPR001451 Hexapeptide repeat TVD_05370 1d1de9d17c591c2f9734c7c5a7e677b9 421 Pfam PF00483 Nucleotidyl transferase 18 280 7.7E-66 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TVD_05370 1d1de9d17c591c2f9734c7c5a7e677b9 421 SUPERFAMILY SSF53448 14 369 9.01E-82 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_05370 1d1de9d17c591c2f9734c7c5a7e677b9 421 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 16 388 4.1E-158 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 TVD_05370 1d1de9d17c591c2f9734c7c5a7e677b9 421 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 206 216 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 TVD_05370 1d1de9d17c591c2f9734c7c5a7e677b9 421 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 108 116 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 TVD_05370 1d1de9d17c591c2f9734c7c5a7e677b9 421 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 22 41 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 TVD_05370 1d1de9d17c591c2f9734c7c5a7e677b9 421 Gene3D G3DSA:3.90.550.10 6 291 9.5E-91 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_05370 1d1de9d17c591c2f9734c7c5a7e677b9 421 Gene3D G3DSA:2.160.10.10 292 420 3.7E-40 T 11-10-2018 TVD_10960 a53658697e2d35400daa295f6d64c11e 293 Pfam PF03888 MucB/RseB N-terminal domain 1 167 1.1E-39 T 11-10-2018 IPR033434 MucB/RseB, N-terminal TVD_10960 a53658697e2d35400daa295f6d64c11e 293 Pfam PF17188 MucB/RseB C-terminal domain 194 287 9.7E-25 T 11-10-2018 IPR033436 MucB/RseB, C-terminal TVD_10960 a53658697e2d35400daa295f6d64c11e 293 PIRSF PIRSF005427 1 293 4.4E-69 T 11-10-2018 IPR005588 MucB/RseB TVD_10960 a53658697e2d35400daa295f6d64c11e 293 Gene3D G3DSA:3.30.200.100 194 290 5.2E-20 T 11-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily TVD_10960 a53658697e2d35400daa295f6d64c11e 293 Gene3D G3DSA:2.50.20.10 1 170 3.8E-35 T 11-10-2018 TVD_00495 0d7e697f71aee718b9bfd039347ec320 429 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 321 420 1.4E-21 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TVD_00495 0d7e697f71aee718b9bfd039347ec320 429 SUPERFAMILY SSF52413 308 422 9.29E-27 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 TVD_00495 0d7e697f71aee718b9bfd039347ec320 429 PIRSF PIRSF500136 3 428 2.0E-142 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 TVD_00495 0d7e697f71aee718b9bfd039347ec320 429 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 11 182 1.5E-26 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TVD_00495 0d7e697f71aee718b9bfd039347ec320 429 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 294 7.5E-24 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TVD_00495 0d7e697f71aee718b9bfd039347ec320 429 Gene3D G3DSA:3.40.50.720 4 202 3.1E-54 T 11-10-2018 TVD_00495 0d7e697f71aee718b9bfd039347ec320 429 SMART SM00984 321 422 6.5E-35 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TVD_00495 0d7e697f71aee718b9bfd039347ec320 429 Gene3D G3DSA:3.40.50.720 205 427 5.2E-55 T 11-10-2018 TVD_00495 0d7e697f71aee718b9bfd039347ec320 429 SUPERFAMILY SSF48179 204 296 1.14E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TVD_00495 0d7e697f71aee718b9bfd039347ec320 429 SUPERFAMILY SSF51735 11 195 1.01E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_00495 0d7e697f71aee718b9bfd039347ec320 429 PIRSF PIRSF000124 10 427 2.1E-46 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TVD_00495 0d7e697f71aee718b9bfd039347ec320 429 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 11 417 5.6E-111 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TVD_12330 dae46320e184b1eadcc2c3475e4ec3d1 289 Gene3D G3DSA:1.20.120.1780 169 288 2.9E-12 T 11-10-2018 TVD_12330 dae46320e184b1eadcc2c3475e4ec3d1 289 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 64 86 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site TVD_12330 dae46320e184b1eadcc2c3475e4ec3d1 289 Pfam PF01040 UbiA prenyltransferase family 25 267 6.7E-59 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 TVD_12330 dae46320e184b1eadcc2c3475e4ec3d1 289 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 2 286 28.173 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 TVD_12330 dae46320e184b1eadcc2c3475e4ec3d1 289 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 284 5.5E-97 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 TVD_12330 dae46320e184b1eadcc2c3475e4ec3d1 289 Gene3D G3DSA:1.10.357.140 22 168 6.8E-40 T 11-10-2018 TVD_13745 c25255288d933241925e52337d9e610d 469 SUPERFAMILY SSF103473 7 452 7.19E-35 T 11-10-2018 IPR036259 MFS transporter superfamily TVD_13745 c25255288d933241925e52337d9e610d 469 Gene3D G3DSA:1.20.1250.20 259 453 1.7E-10 T 11-10-2018 TVD_13745 c25255288d933241925e52337d9e610d 469 Pfam PF07690 Major Facilitator Superfamily 32 408 1.3E-19 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TVD_13745 c25255288d933241925e52337d9e610d 469 Gene3D G3DSA:1.20.1250.20 2 216 2.7E-12 T 11-10-2018 TVD_05365 d053f723c1194aa98f13a0a2c3d26c7d 672 Gene3D G3DSA:2.60.40.10 4 165 4.7E-51 T 11-10-2018 IPR013783 Immunoglobulin-like fold TVD_05365 d053f723c1194aa98f13a0a2c3d26c7d 672 SUPERFAMILY SSF81296 81 152 6.72E-11 T 11-10-2018 IPR014756 Immunoglobulin E-set TVD_05365 d053f723c1194aa98f13a0a2c3d26c7d 672 PIRSF PIRSF000463 20 672 2.5E-274 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 TVD_05365 d053f723c1194aa98f13a0a2c3d26c7d 672 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 573 669 9.6E-17 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 TVD_05365 d053f723c1194aa98f13a0a2c3d26c7d 672 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 52 667 9.4E-266 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 TVD_05365 d053f723c1194aa98f13a0a2c3d26c7d 672 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 68 151 2.1E-23 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 TVD_05365 d053f723c1194aa98f13a0a2c3d26c7d 672 Gene3D G3DSA:2.60.40.1180 568 670 6.8E-31 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta TVD_05365 d053f723c1194aa98f13a0a2c3d26c7d 672 Gene3D G3DSA:3.20.20.80 168 566 2.9E-164 T 11-10-2018 TVD_05365 d053f723c1194aa98f13a0a2c3d26c7d 672 Pfam PF00128 Alpha amylase, catalytic domain 217 288 4.8E-9 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TVD_05365 d053f723c1194aa98f13a0a2c3d26c7d 672 SUPERFAMILY SSF51011 568 670 2.16E-27 T 11-10-2018 TVD_05365 d053f723c1194aa98f13a0a2c3d26c7d 672 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 44 670 43.546 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 TVD_05365 d053f723c1194aa98f13a0a2c3d26c7d 672 SUPERFAMILY SSF51445 123 561 1.73E-114 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TVD_05365 d053f723c1194aa98f13a0a2c3d26c7d 672 SMART SM00642 195 564 2.2E-7 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 TVD_03015 33bea180c5bf19b1bff415e69daef9e4 282 Pfam PF02577 Bifunctional nuclease 41 163 4.0E-33 T 11-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 TVD_03015 33bea180c5bf19b1bff415e69daef9e4 282 Gene3D G3DSA:2.30.42.10 179 275 7.4E-15 T 11-10-2018 TVD_03015 33bea180c5bf19b1bff415e69daef9e4 282 Gene3D G3DSA:3.10.690.10 26 171 6.3E-36 T 11-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 TVD_03015 33bea180c5bf19b1bff415e69daef9e4 282 SUPERFAMILY SSF103256 38 164 1.06E-28 T 11-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 TVD_03015 33bea180c5bf19b1bff415e69daef9e4 282 SUPERFAMILY SSF50156 205 268 1.46E-8 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 Gene3D G3DSA:1.20.1640.10 512 1016 1.2E-277 T 11-10-2018 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 SUPERFAMILY SSF82866 797 1021 3.4E-48 T 11-10-2018 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 Gene3D G3DSA:3.30.70.1430 42 809 1.2E-277 T 11-10-2018 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 SUPERFAMILY SSF82693 148 321 1.92E-16 T 11-10-2018 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 1.3E-34 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.3E-34 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.3E-34 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 1.3E-34 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 1.3E-34 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.3E-34 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 1.3E-34 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 SUPERFAMILY SSF82714 713 797 6.8E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_02675 565f99b2edd7e475ef6923124d455792 1026 Gene3D G3DSA:3.30.2090.10 182 273 1.2E-277 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_02675 565f99b2edd7e475ef6923124d455792 1026 Pfam PF00873 AcrB/AcrD/AcrF family 6 1018 2.1E-263 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 SUPERFAMILY SSF82693 43 130 5.41E-23 T 11-10-2018 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 Gene3D G3DSA:3.30.2090.10 714 801 1.2E-277 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_02675 565f99b2edd7e475ef6923124d455792 1026 Gene3D G3DSA:3.30.70.1320 136 327 1.2E-277 T 11-10-2018 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 Gene3D G3DSA:3.30.70.1440 664 860 1.2E-277 T 11-10-2018 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 SUPERFAMILY SSF82714 185 267 1.57E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_02675 565f99b2edd7e475ef6923124d455792 1026 Gene3D G3DSA:3.30.70.1430 565 662 1.2E-277 T 11-10-2018 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1021 3.9E-250 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 Gene3D G3DSA:1.20.1640.10 14 511 1.2E-277 T 11-10-2018 TVD_02675 565f99b2edd7e475ef6923124d455792 1026 SUPERFAMILY SSF82866 296 499 2.35E-42 T 11-10-2018 TVD_03200 3ac69f5f8f8879665c95b436d3774f2b 269 SMART SM01117 41 118 4.2E-21 T 11-10-2018 IPR001199 Cytochrome b5-like heme/steroid binding domain TVD_03200 3ac69f5f8f8879665c95b436d3774f2b 269 SUPERFAMILY SSF55856 36 122 1.96E-23 T 11-10-2018 IPR036400 Cytochrome b5-like heme/steroid binding domain superfamily TVD_03200 3ac69f5f8f8879665c95b436d3774f2b 269 Pfam PF00173 Cytochrome b5-like Heme/Steroid binding domain 42 118 3.8E-18 T 11-10-2018 IPR001199 Cytochrome b5-like heme/steroid binding domain TVD_03200 3ac69f5f8f8879665c95b436d3774f2b 269 Gene3D G3DSA:3.10.120.10 32 120 2.0E-27 T 11-10-2018 IPR036400 Cytochrome b5-like heme/steroid binding domain superfamily TVD_05180 8bd6331c10a3263ff53bbe39ba2f69a6 314 Gene3D G3DSA:3.40.50.720 2 314 6.1E-64 T 11-10-2018 TVD_05180 8bd6331c10a3263ff53bbe39ba2f69a6 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 229 5.7E-29 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TVD_05180 8bd6331c10a3263ff53bbe39ba2f69a6 314 SUPERFAMILY SSF51735 2 313 7.38E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 Gene3D G3DSA:3.90.1150.50 1008 1154 1.0E-36 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 Gene3D G3DSA:3.40.50.11140 362 458 6.2E-10 T 11-10-2018 TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 Pfam PF00270 DEAD/DEAH box helicase 611 768 9.8E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 SMART SM00487 604 794 5.9E-32 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 151 1086 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 Gene3D G3DSA:3.40.50.300 546 785 1.8E-231 T 11-10-2018 TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 Gene3D G3DSA:2.30.30.840 487 545 1.8E-231 T 11-10-2018 TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 Gene3D G3DSA:3.40.50.11180 28 335 2.4E-108 T 11-10-2018 TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 Gene3D G3DSA:3.40.50.300 482 993 1.8E-231 T 11-10-2018 TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 27 1113 27.425 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 Pfam PF02559 CarD-like/TRCF domain 484 577 2.7E-23 T 11-10-2018 IPR003711 CarD-like/TRCF domain TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 SMART SM00982 1012 1112 1.7E-43 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 SUPERFAMILY SSF141259 475 552 1.57E-22 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 SUPERFAMILY SSF52540 527 787 3.3E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 SUPERFAMILY SSF143517 1000 1150 1.11E-37 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 SMART SM00490 830 914 5.3E-18 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 SUPERFAMILY SSF52540 11 342 3.19E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 SMART SM01058 483 580 3.9E-46 T 11-10-2018 IPR003711 CarD-like/TRCF domain TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 SUPERFAMILY SSF52540 786 994 3.19E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 Pfam PF03461 TRCF domain 1014 1105 1.2E-22 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 Pfam PF00271 Helicase conserved C-terminal domain 810 913 6.8E-16 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 Gene3D G3DSA:3.30.2060.10 134 219 2.4E-108 T 11-10-2018 TVD_06435 5d0e55da0889d0aa716c2019dae327af 1156 SUPERFAMILY SSF52540 360 469 7.43E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_09420 0c8293ba8a6c8adb89ab5654a9291cfc 267 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 182 264 4.9E-33 T 11-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal TVD_09420 0c8293ba8a6c8adb89ab5654a9291cfc 267 SUPERFAMILY SSF52540 24 228 3.35E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_09420 0c8293ba8a6c8adb89ab5654a9291cfc 267 Gene3D G3DSA:3.40.50.300 18 187 3.6E-31 T 11-10-2018 TVD_09420 0c8293ba8a6c8adb89ab5654a9291cfc 267 Pfam PF07728 AAA domain (dynein-related subfamily) 36 169 6.6E-34 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 TVD_13145 0d11be4a23d5c0d83bb759af2e599ca6 936 SMART SM00861 583 776 4.2E-60 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TVD_13145 0d11be4a23d5c0d83bb759af2e599ca6 936 SUPERFAMILY SSF52518 110 513 8.33E-87 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TVD_13145 0d11be4a23d5c0d83bb759af2e599ca6 936 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 781 923 3.1E-41 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 TVD_13145 0d11be4a23d5c0d83bb759af2e599ca6 936 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 23 54 3.6E-9 T 11-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 TVD_13145 0d11be4a23d5c0d83bb759af2e599ca6 936 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 22 922 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 TVD_13145 0d11be4a23d5c0d83bb759af2e599ca6 936 Gene3D G3DSA:3.40.50.12470 546 792 6.8E-160 T 11-10-2018 TVD_13145 0d11be4a23d5c0d83bb759af2e599ca6 936 PIRSF PIRSF000157 6 925 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 TVD_13145 0d11be4a23d5c0d83bb759af2e599ca6 936 Pfam PF02779 Transketolase, pyrimidine binding domain 582 777 2.8E-65 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TVD_13145 0d11be4a23d5c0d83bb759af2e599ca6 936 Pfam PF00676 Dehydrogenase E1 component 200 501 9.8E-53 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 TVD_13145 0d11be4a23d5c0d83bb759af2e599ca6 936 Gene3D G3DSA:3.40.50.970 153 510 7.2E-144 T 11-10-2018 TVD_13145 0d11be4a23d5c0d83bb759af2e599ca6 936 SUPERFAMILY SSF52518 566 783 7.26E-53 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TVD_13145 0d11be4a23d5c0d83bb759af2e599ca6 936 Gene3D G3DSA:3.40.50.11610 713 920 6.8E-160 T 11-10-2018 TVD_13145 0d11be4a23d5c0d83bb759af2e599ca6 936 Gene3D G3DSA:1.10.287.1150 72 152 2.8E-14 T 11-10-2018 TVD_10250 01f33a22e2ab4b6db08dee28fab39007 310 Gene3D G3DSA:3.40.190.290 91 299 1.3E-49 T 11-10-2018 TVD_10250 01f33a22e2ab4b6db08dee28fab39007 310 SUPERFAMILY SSF46785 4 86 4.02E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_10250 01f33a22e2ab4b6db08dee28fab39007 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.3E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_10250 01f33a22e2ab4b6db08dee28fab39007 310 Gene3D G3DSA:1.10.10.10 1 90 1.3E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_10250 01f33a22e2ab4b6db08dee28fab39007 310 SUPERFAMILY SSF53850 91 297 1.59E-50 T 11-10-2018 TVD_10250 01f33a22e2ab4b6db08dee28fab39007 310 Pfam PF03466 LysR substrate binding domain 88 293 5.5E-54 T 11-10-2018 IPR005119 LysR, substrate-binding TVD_10250 01f33a22e2ab4b6db08dee28fab39007 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.2E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_10250 01f33a22e2ab4b6db08dee28fab39007 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.2E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_10250 01f33a22e2ab4b6db08dee28fab39007 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.2E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_13645 1bbfa8d16142eb8e634ce9f69bc89649 307 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 16 303 55.594 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD TVD_13645 1bbfa8d16142eb8e634ce9f69bc89649 307 Pfam PF00589 Phage integrase family 120 289 2.8E-45 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TVD_13645 1bbfa8d16142eb8e634ce9f69bc89649 307 SUPERFAMILY SSF56349 21 296 1.06E-52 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TVD_13645 1bbfa8d16142eb8e634ce9f69bc89649 307 Gene3D G3DSA:1.10.150.130 14 105 8.6E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal TVD_13645 1bbfa8d16142eb8e634ce9f69bc89649 307 Gene3D G3DSA:1.10.443.10 118 297 8.0E-58 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TVD_13645 1bbfa8d16142eb8e634ce9f69bc89649 307 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 18 96 3.7E-17 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TVD_13645 1bbfa8d16142eb8e634ce9f69bc89649 307 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 20 305 8.5E-103 T 11-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 TVD_11140 ee93694db0520bfb8a3923cb367310d9 98 Gene3D G3DSA:1.10.10.60 9 90 3.4E-7 T 11-10-2018 TVD_11140 ee93694db0520bfb8a3923cb367310d9 98 SUPERFAMILY SSF46689 4 96 1.2E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_11140 ee93694db0520bfb8a3923cb367310d9 98 Pfam PF01527 Transposase 3 76 1.4E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 TVD_05920 ee93694db0520bfb8a3923cb367310d9 98 Gene3D G3DSA:1.10.10.60 9 90 3.4E-7 T 11-10-2018 TVD_05920 ee93694db0520bfb8a3923cb367310d9 98 SUPERFAMILY SSF46689 4 96 1.2E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_05920 ee93694db0520bfb8a3923cb367310d9 98 Pfam PF01527 Transposase 3 76 1.4E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 SUPERFAMILY SSF141868 558 810 4.71E-72 T 11-10-2018 IPR035919 EAL domain superfamily TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 Pfam PF00990 Diguanylate cyclase, GGDEF domain 379 536 5.7E-44 T 11-10-2018 IPR000160 GGDEF domain TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 Gene3D G3DSA:3.20.20.450 541 807 2.4E-83 T 11-10-2018 IPR035919 EAL domain superfamily TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 Pfam PF08448 PAS fold 256 368 1.4E-13 T 11-10-2018 IPR013656 PAS fold-4 TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 Pfam PF08448 PAS fold 140 239 6.1E-5 T 11-10-2018 IPR013656 PAS fold-4 TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 Gene3D G3DSA:3.30.450.20 6 118 4.4E-23 T 11-10-2018 TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 249 375 1.0E-12 T 11-10-2018 IPR000014 PAS domain TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 127 8.2E-22 T 11-10-2018 IPR000014 PAS domain TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 Gene3D G3DSA:3.30.450.20 121 240 2.3E-12 T 11-10-2018 TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 Gene3D G3DSA:3.30.450.20 241 371 1.4E-18 T 11-10-2018 TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 SMART SM00267 368 540 2.1E-61 T 11-10-2018 IPR000160 GGDEF domain TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 SMART SM00052 552 804 2.1E-71 T 11-10-2018 IPR001633 EAL domain TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 375 539 5.5E-43 T 11-10-2018 IPR000160 GGDEF domain TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 Pfam PF00563 EAL domain 559 799 7.0E-66 T 11-10-2018 IPR001633 EAL domain TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 Pfam PF13426 PAS domain 22 118 5.9E-10 T 11-10-2018 IPR000014 PAS domain TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 SUPERFAMILY SSF55073 384 542 5.76E-49 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 Gene3D G3DSA:3.30.70.270 372 540 2.9E-58 T 11-10-2018 TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 SUPERFAMILY SSF55785 235 364 1.26E-17 T 11-10-2018 IPR035965 PAS domain superfamily TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 SMART SM00091 132 196 0.46 T 11-10-2018 IPR000014 PAS domain TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 SMART SM00091 250 316 7.7E-7 T 11-10-2018 IPR000014 PAS domain TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 SMART SM00091 8 75 2.7E-8 T 11-10-2018 IPR000014 PAS domain TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 SUPERFAMILY SSF55785 117 236 9.34E-16 T 11-10-2018 IPR035965 PAS domain superfamily TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 SMART SM00086 80 120 7.0E-5 T 11-10-2018 IPR001610 PAC motif TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 SMART SM00086 326 368 0.17 T 11-10-2018 IPR001610 PAC motif TVD_11475 0af9893e84f0a7a3f86a008e865f5a2a 814 SUPERFAMILY SSF55785 19 128 1.05E-19 T 11-10-2018 IPR035965 PAS domain superfamily TVD_13505 f2cea061a56e4af2cd61b18032809e97 101 SUPERFAMILY SSF54211 3 100 9.1E-23 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_13505 f2cea061a56e4af2cd61b18032809e97 101 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 44 58 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 TVD_13505 f2cea061a56e4af2cd61b18032809e97 101 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 99 11.255 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TVD_13505 f2cea061a56e4af2cd61b18032809e97 101 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 6 85 3.0E-8 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TVD_13505 f2cea061a56e4af2cd61b18032809e97 101 Gene3D G3DSA:3.30.230.10 1 101 1.1E-30 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TVD_13505 f2cea061a56e4af2cd61b18032809e97 101 Pfam PF00825 Ribonuclease P 4 100 1.9E-25 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TVD_13505 f2cea061a56e4af2cd61b18032809e97 101 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 100 4.9E-21 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TVD_06220 1d2ad852d94dc005ed7ddf5ba3062680 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 6 139 3.0E-40 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 TVD_06220 1d2ad852d94dc005ed7ddf5ba3062680 139 SUPERFAMILY SSF111038 1 139 4.84E-45 T 11-10-2018 IPR035917 YjbQ-like superfamily TVD_06220 1d2ad852d94dc005ed7ddf5ba3062680 139 Pfam PF01894 Uncharacterised protein family UPF0047 20 136 6.1E-38 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 TVD_06220 1d2ad852d94dc005ed7ddf5ba3062680 139 PIRSF PIRSF004681 1 139 7.3E-47 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 TVD_06220 1d2ad852d94dc005ed7ddf5ba3062680 139 Gene3D G3DSA:2.60.120.460 1 139 7.5E-42 T 11-10-2018 IPR035917 YjbQ-like superfamily TVD_10280 75489dab4f44adb52ec7ebe401e20c9f 316 Gene3D G3DSA:3.30.1330.40 191 316 2.8E-18 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TVD_10280 75489dab4f44adb52ec7ebe401e20c9f 316 SUPERFAMILY SSF55298 191 313 4.54E-14 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TVD_06975 f35420f3681f54b945dc54b720c575b7 86 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 3 73 4.3E-25 T 11-10-2018 IPR003746 Protein of unknown function DUF167 TVD_06975 f35420f3681f54b945dc54b720c575b7 86 Hamap MF_00634 UPF0235 protein YggU [yggU]. 1 86 18.542 T 11-10-2018 IPR003746 Protein of unknown function DUF167 TVD_06975 f35420f3681f54b945dc54b720c575b7 86 Gene3D G3DSA:3.30.1200.10 2 85 5.6E-27 T 11-10-2018 IPR036591 YggU-like superfamily TVD_06975 f35420f3681f54b945dc54b720c575b7 86 SMART SM01152 1 74 2.2E-29 T 11-10-2018 IPR003746 Protein of unknown function DUF167 TVD_06975 f35420f3681f54b945dc54b720c575b7 86 SUPERFAMILY SSF69786 3 77 3.27E-24 T 11-10-2018 IPR036591 YggU-like superfamily TVD_02695 034626da799943a24d9cbedd80a3b1d6 368 Gene3D G3DSA:3.20.20.70 6 368 1.8E-140 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_02695 034626da799943a24d9cbedd80a3b1d6 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 345 2.9E-83 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 TVD_02695 034626da799943a24d9cbedd80a3b1d6 368 SUPERFAMILY SSF51395 2 366 4.4E-126 T 11-10-2018 TVD_13695 9c39ed497dbe17b0c63245de22bddaa3 242 Pfam PF00977 Histidine biosynthesis protein 3 232 4.2E-79 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 TVD_13695 9c39ed497dbe17b0c63245de22bddaa3 242 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 37.203 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 TVD_13695 9c39ed497dbe17b0c63245de22bddaa3 242 SUPERFAMILY SSF51366 1 239 2.28E-74 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TVD_13695 9c39ed497dbe17b0c63245de22bddaa3 242 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 236 1.6E-79 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 TVD_13695 9c39ed497dbe17b0c63245de22bddaa3 242 Gene3D G3DSA:3.20.20.70 1 241 6.5E-90 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_06325 3039ec8994a09069a6867c62195436a8 414 Gene3D G3DSA:1.20.120.1380 137 345 6.3E-42 T 11-10-2018 TVD_06325 3039ec8994a09069a6867c62195436a8 414 SMART SM00962 164 355 3.0E-24 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TVD_06325 3039ec8994a09069a6867c62195436a8 414 Pfam PF00448 SRP54-type protein, GTPase domain 167 350 1.2E-25 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TVD_06325 3039ec8994a09069a6867c62195436a8 414 SMART SM00382 163 318 7.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_06325 3039ec8994a09069a6867c62195436a8 414 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 252 3.4E-61 T 11-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 TVD_06325 3039ec8994a09069a6867c62195436a8 414 Gene3D G3DSA:3.40.50.300 159 343 6.3E-42 T 11-10-2018 TVD_06325 3039ec8994a09069a6867c62195436a8 414 SUPERFAMILY SSF52540 161 352 9.52E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_02375 e21d64c2487d349bffeffec1dec20a60 273 Gene3D G3DSA:2.40.50.140 1 114 2.5E-46 T 11-10-2018 TVD_02375 e21d64c2487d349bffeffec1dec20a60 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.1E-33 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02375 e21d64c2487d349bffeffec1dec20a60 273 PIRSF PIRSF002158 14 273 5.9E-97 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02375 e21d64c2487d349bffeffec1dec20a60 273 SUPERFAMILY SSF50104 126 269 4.09E-60 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily TVD_02375 e21d64c2487d349bffeffec1dec20a60 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 273 1.0E-125 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 TVD_02375 e21d64c2487d349bffeffec1dec20a60 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02375 e21d64c2487d349bffeffec1dec20a60 273 SMART SM01382 124 251 8.9E-89 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 TVD_02375 e21d64c2487d349bffeffec1dec20a60 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 249 4.6E-56 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 TVD_02375 e21d64c2487d349bffeffec1dec20a60 273 Gene3D G3DSA:2.30.30.30 118 195 1.3E-33 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 TVD_02375 e21d64c2487d349bffeffec1dec20a60 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 46.7 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 TVD_02375 e21d64c2487d349bffeffec1dec20a60 273 SMART SM01383 42 118 5.9E-45 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02375 e21d64c2487d349bffeffec1dec20a60 273 Gene3D G3DSA:4.10.950.10 196 273 4.0E-35 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02375 e21d64c2487d349bffeffec1dec20a60 273 SUPERFAMILY SSF50249 2 124 1.13E-45 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_05800 297c5f634a4ac582280fc3561d9cb650 115 Gene3D G3DSA:3.30.70.120 1 98 1.9E-11 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TVD_05800 297c5f634a4ac582280fc3561d9cb650 115 SUPERFAMILY SSF54913 2 99 2.67E-14 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TVD_06025 38bb8a302dc820d8474e91207ecce4c8 602 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 146 275 5.4E-14 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_06025 38bb8a302dc820d8474e91207ecce4c8 602 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 390 510 3.1E-27 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_06025 38bb8a302dc820d8474e91207ecce4c8 602 Gene3D G3DSA:3.40.50.300 118 293 1.9E-22 T 11-10-2018 TVD_06025 38bb8a302dc820d8474e91207ecce4c8 602 Gene3D G3DSA:3.40.50.300 374 528 9.1E-38 T 11-10-2018 TVD_06025 38bb8a302dc820d8474e91207ecce4c8 602 SMART SM00382 142 279 1.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_06025 38bb8a302dc820d8474e91207ecce4c8 602 SMART SM00382 385 514 4.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_06025 38bb8a302dc820d8474e91207ecce4c8 602 SUPERFAMILY SSF52540 130 325 5.82E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06025 38bb8a302dc820d8474e91207ecce4c8 602 SUPERFAMILY SSF52540 369 536 4.91E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_07555 44be45730d851f5359af9866a762dfb5 262 Gene3D G3DSA:1.25.40.960 134 179 2.5E-10 T 11-10-2018 TVD_07555 44be45730d851f5359af9866a762dfb5 262 Gene3D G3DSA:1.25.40.20 33 133 2.9E-18 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TVD_07555 44be45730d851f5359af9866a762dfb5 262 Pfam PF12796 Ankyrin repeats (3 copies) 75 157 3.1E-14 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain TVD_07555 44be45730d851f5359af9866a762dfb5 262 SMART SM00248 28 57 160.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TVD_07555 44be45730d851f5359af9866a762dfb5 262 SMART SM00248 128 157 1.8E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TVD_07555 44be45730d851f5359af9866a762dfb5 262 SMART SM00248 62 90 390.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TVD_07555 44be45730d851f5359af9866a762dfb5 262 SMART SM00248 94 124 5.6 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 TVD_07555 44be45730d851f5359af9866a762dfb5 262 SUPERFAMILY SSF48403 33 172 1.61E-28 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily TVD_05595 af24094fbdafd323faaf66827b0283d8 169 Gene3D G3DSA:3.40.30.10 1 168 5.3E-62 T 11-10-2018 TVD_05595 af24094fbdafd323faaf66827b0283d8 169 SUPERFAMILY SSF52833 3 158 6.94E-57 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_05595 af24094fbdafd323faaf66827b0283d8 169 PRINTS PR01011 Glutathione peroxidase family signature 22 39 1.7E-20 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TVD_05595 af24094fbdafd323faaf66827b0283d8 169 PRINTS PR01011 Glutathione peroxidase family signature 57 73 1.7E-20 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TVD_05595 af24094fbdafd323faaf66827b0283d8 169 PRINTS PR01011 Glutathione peroxidase family signature 122 131 1.7E-20 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TVD_05595 af24094fbdafd323faaf66827b0283d8 169 PIRSF PIRSF000303 1 162 1.7E-59 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TVD_05595 af24094fbdafd323faaf66827b0283d8 169 Pfam PF00255 Glutathione peroxidase 5 110 2.5E-35 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 TVD_05595 af24094fbdafd323faaf66827b0283d8 169 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 11-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 TVD_01470 a30ed3d7adce9ab26e402ea5837a8c9c 94 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 1 78 1.6E-32 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 TVD_01470 a30ed3d7adce9ab26e402ea5837a8c9c 94 Pfam PF01381 Helix-turn-helix 15 64 2.9E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TVD_01470 a30ed3d7adce9ab26e402ea5837a8c9c 94 SMART SM00530 9 65 2.3E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TVD_01470 a30ed3d7adce9ab26e402ea5837a8c9c 94 Gene3D G3DSA:1.10.260.40 1 94 1.7E-31 T 11-10-2018 TVD_01470 a30ed3d7adce9ab26e402ea5837a8c9c 94 SUPERFAMILY SSF47413 5 84 1.41E-24 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TVD_03770 09664bf94137b07bdd3b3de83d16cf86 673 PIRSF PIRSF015380 2 670 6.4E-203 T 11-10-2018 IPR011385 Putative site-specific recombinase Gcr TVD_03770 09664bf94137b07bdd3b3de83d16cf86 673 Pfam PF10136 Site-specific recombinase 21 656 1.2E-231 T 11-10-2018 IPR011385 Putative site-specific recombinase Gcr TVD_05300 edabaa68c42b138ff4fce81d0e1e1787 841 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 285 409 7.3E-25 T 11-10-2018 IPR000014 PAS domain TVD_05300 edabaa68c42b138ff4fce81d0e1e1787 841 Pfam PF00563 EAL domain 592 824 1.5E-70 T 11-10-2018 IPR001633 EAL domain TVD_05300 edabaa68c42b138ff4fce81d0e1e1787 841 Gene3D G3DSA:3.20.20.450 579 831 2.8E-98 T 11-10-2018 IPR035919 EAL domain superfamily TVD_05300 edabaa68c42b138ff4fce81d0e1e1787 841 Gene3D G3DSA:3.30.450.20 274 401 1.4E-30 T 11-10-2018 TVD_05300 edabaa68c42b138ff4fce81d0e1e1787 841 SUPERFAMILY SSF55785 274 401 1.83E-27 T 11-10-2018 IPR035965 PAS domain superfamily TVD_05300 edabaa68c42b138ff4fce81d0e1e1787 841 Pfam PF00990 Diguanylate cyclase, GGDEF domain 414 572 1.0E-48 T 11-10-2018 IPR000160 GGDEF domain TVD_05300 edabaa68c42b138ff4fce81d0e1e1787 841 SMART SM00091 287 353 6.3E-16 T 11-10-2018 IPR000014 PAS domain TVD_05300 edabaa68c42b138ff4fce81d0e1e1787 841 SMART SM00267 403 576 5.4E-66 T 11-10-2018 IPR000160 GGDEF domain TVD_05300 edabaa68c42b138ff4fce81d0e1e1787 841 SUPERFAMILY SSF55073 419 578 2.28E-48 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_05300 edabaa68c42b138ff4fce81d0e1e1787 841 Pfam PF00989 PAS fold 288 400 4.1E-18 T 11-10-2018 IPR013767 PAS fold GO:0006355 TVD_05300 edabaa68c42b138ff4fce81d0e1e1787 841 Gene3D G3DSA:3.30.70.270 408 578 1.3E-56 T 11-10-2018 TVD_05300 edabaa68c42b138ff4fce81d0e1e1787 841 SMART SM00052 586 831 7.1E-113 T 11-10-2018 IPR001633 EAL domain TVD_05300 edabaa68c42b138ff4fce81d0e1e1787 841 Pfam PF17159 Membrane-associated sensor domain 43 271 2.9E-57 T 11-10-2018 IPR033425 Membrane-associated sensor domain MASE3 TVD_05300 edabaa68c42b138ff4fce81d0e1e1787 841 SUPERFAMILY SSF141868 592 834 4.71E-87 T 11-10-2018 IPR035919 EAL domain superfamily TVD_05300 edabaa68c42b138ff4fce81d0e1e1787 841 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 410 574 1.6E-44 T 11-10-2018 IPR000160 GGDEF domain TVD_04380 5ae5464a9384678e6ec7a09298a5352f 64 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 28.677 T 11-10-2018 IPR038053 Uncharacterised protein family UPF0434 TVD_04380 5ae5464a9384678e6ec7a09298a5352f 64 Gene3D G3DSA:2.20.25.10 8 63 1.2E-26 T 11-10-2018 TVD_04380 5ae5464a9384678e6ec7a09298a5352f 64 SUPERFAMILY SSF158997 1 56 2.09E-21 T 11-10-2018 TVD_04380 5ae5464a9384678e6ec7a09298a5352f 64 Pfam PF03966 Trm112p-like protein 2 40 3.2E-10 T 11-10-2018 IPR005651 Trm112-like TVD_09525 92ed6ba44c189974b6e079ae2c5813ac 256 SUPERFAMILY SSF63848 151 255 9.29E-29 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 TVD_09525 92ed6ba44c189974b6e079ae2c5813ac 256 Gene3D G3DSA:3.30.750.120 5 119 7.9E-16 T 11-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily TVD_09525 92ed6ba44c189974b6e079ae2c5813ac 256 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 11 256 4.3E-55 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 TVD_09525 92ed6ba44c189974b6e079ae2c5813ac 256 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 153 253 2.3E-29 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 TVD_09525 92ed6ba44c189974b6e079ae2c5813ac 256 Gene3D G3DSA:2.160.20.70 148 256 1.4E-31 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 TVD_09525 92ed6ba44c189974b6e079ae2c5813ac 256 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 10 97 5.7E-11 T 11-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 TVD_09525 92ed6ba44c189974b6e079ae2c5813ac 256 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 10 256 23.367 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 TVD_10955 371b14bded8d817c87e78a3e5881717b 162 PIRSF PIRSF004923 4 152 1.0E-28 T 11-10-2018 IPR026268 Protein RseC TVD_10955 371b14bded8d817c87e78a3e5881717b 162 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 11 142 1.3E-26 T 11-10-2018 TVD_11875 3da56915e1c11b72e6f433dce645cacb 256 Pfam PF12706 Beta-lactamase superfamily domain 23 206 8.7E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_11875 3da56915e1c11b72e6f433dce645cacb 256 SMART SM00849 12 213 6.0E-11 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_11875 3da56915e1c11b72e6f433dce645cacb 256 Gene3D G3DSA:3.60.15.10 5 239 2.5E-36 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_11875 3da56915e1c11b72e6f433dce645cacb 256 SUPERFAMILY SSF56281 2 232 9.43E-41 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_01215 040eafa2dd7c1c4fc4515790cec508a4 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 30.283 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 TVD_01215 040eafa2dd7c1c4fc4515790cec508a4 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 5 285 1.5E-65 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 TVD_01215 040eafa2dd7c1c4fc4515790cec508a4 293 Gene3D G3DSA:3.40.50.150 102 293 2.3E-55 T 11-10-2018 TVD_01215 040eafa2dd7c1c4fc4515790cec508a4 293 PIRSF PIRSF000401 1 293 2.8E-73 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 TVD_01215 040eafa2dd7c1c4fc4515790cec508a4 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 4 291 2.4E-79 T 11-10-2018 TVD_01215 040eafa2dd7c1c4fc4515790cec508a4 293 SUPERFAMILY SSF53335 53 272 6.27E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_02655 ed9a64db8c362a79711dde8a5a1f9879 291 PRINTS PR00421 Thioredoxin family signature 81 92 1.2E-7 T 11-10-2018 TVD_02655 ed9a64db8c362a79711dde8a5a1f9879 291 PRINTS PR00421 Thioredoxin family signature 41 50 1.2E-7 T 11-10-2018 TVD_02655 ed9a64db8c362a79711dde8a5a1f9879 291 PRINTS PR00421 Thioredoxin family signature 33 41 1.2E-7 T 11-10-2018 TVD_02655 ed9a64db8c362a79711dde8a5a1f9879 291 Pfam PF00085 Thioredoxin 13 115 2.6E-29 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 TVD_02655 ed9a64db8c362a79711dde8a5a1f9879 291 Pfam PF14561 Tetratricopeptide repeat 205 291 3.5E-17 T 11-10-2018 TVD_02655 ed9a64db8c362a79711dde8a5a1f9879 291 ProSitePatterns PS00194 Thioredoxin family active site. 34 52 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TVD_02655 ed9a64db8c362a79711dde8a5a1f9879 291 Gene3D G3DSA:1.25.40.10 205 291 3.8E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_02655 ed9a64db8c362a79711dde8a5a1f9879 291 Gene3D G3DSA:1.25.40.10 121 204 1.8E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_02655 ed9a64db8c362a79711dde8a5a1f9879 291 SUPERFAMILY SSF52833 9 119 9.45E-39 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_02655 ed9a64db8c362a79711dde8a5a1f9879 291 SUPERFAMILY SSF48452 123 253 2.53E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_02655 ed9a64db8c362a79711dde8a5a1f9879 291 Pfam PF14559 Tetratricopeptide repeat 135 198 1.7E-13 T 11-10-2018 TVD_02655 ed9a64db8c362a79711dde8a5a1f9879 291 Gene3D G3DSA:3.40.30.10 11 120 4.1E-35 T 11-10-2018 TVD_02655 ed9a64db8c362a79711dde8a5a1f9879 291 TIGRFAM TIGR01068 thioredoxin: thioredoxin 16 116 3.3E-32 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TVD_13025 e5750e2d6e4c700b6ab3a1e7e3737a1b 215 Gene3D G3DSA:3.40.30.10 39 211 1.1E-44 T 11-10-2018 TVD_13025 e5750e2d6e4c700b6ab3a1e7e3737a1b 215 Pfam PF02630 SCO1/SenC 47 190 3.2E-32 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_13025 e5750e2d6e4c700b6ab3a1e7e3737a1b 215 SUPERFAMILY SSF52833 58 209 9.13E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_06170 d66d77c3c58e2d94117974c64e381aa9 412 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 89 145 2.7E-10 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TVD_06170 d66d77c3c58e2d94117974c64e381aa9 412 Gene3D G3DSA:1.10.150.130 87 197 1.3E-14 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal TVD_06170 d66d77c3c58e2d94117974c64e381aa9 412 SUPERFAMILY SSF56349 88 380 1.74E-56 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TVD_06170 d66d77c3c58e2d94117974c64e381aa9 412 Gene3D G3DSA:1.10.443.10 198 389 1.6E-39 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TVD_06170 d66d77c3c58e2d94117974c64e381aa9 412 Pfam PF00589 Phage integrase family 204 372 1.4E-19 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TVD_06170 d66d77c3c58e2d94117974c64e381aa9 412 Pfam PF12167 Arm DNA-binding domain 1 65 2.8E-25 T 11-10-2018 IPR022000 Min27-like integrase, DNA-binding domain TVD_12145 6cd16a6cf438a174bace5207ef01e4a0 484 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 474 94.34 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TVD_12145 6cd16a6cf438a174bace5207ef01e4a0 484 SUPERFAMILY SSF75304 5 480 7.85E-170 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TVD_12145 6cd16a6cf438a174bace5207ef01e4a0 484 Gene3D G3DSA:3.90.1300.10 1 483 2.7E-207 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TVD_12145 6cd16a6cf438a174bace5207ef01e4a0 484 Pfam PF01425 Amidase 22 463 3.1E-163 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TVD_12145 6cd16a6cf438a174bace5207ef01e4a0 484 ProSitePatterns PS00571 Amidases signature. 149 180 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 TVD_12145 6cd16a6cf438a174bace5207ef01e4a0 484 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 474 8.1E-184 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TVD_12785 000578a4ebb89abd41d0883f1987ce02 203 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 12 194 9.7E-50 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 TVD_12785 000578a4ebb89abd41d0883f1987ce02 203 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 130 136 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TVD_12785 000578a4ebb89abd41d0883f1987ce02 203 PIRSF PIRSF004553 14 197 2.8E-48 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 TVD_12785 000578a4ebb89abd41d0883f1987ce02 203 SUPERFAMILY SSF53335 15 190 1.06E-48 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_12785 000578a4ebb89abd41d0883f1987ce02 203 Pfam PF03602 Conserved hypothetical protein 95 15 191 1.1E-50 T 11-10-2018 TVD_12785 000578a4ebb89abd41d0883f1987ce02 203 Gene3D G3DSA:3.40.50.150 4 201 1.9E-57 T 11-10-2018 TVD_13215 25a3e3ea322b7b286388adcd9d208519 337 Gene3D G3DSA:3.40.190.80 197 336 8.1E-52 T 11-10-2018 TVD_13215 25a3e3ea322b7b286388adcd9d208519 337 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 336 47.195 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 TVD_13215 25a3e3ea322b7b286388adcd9d208519 337 Gene3D G3DSA:3.30.540.10 2 195 7.8E-75 T 11-10-2018 TVD_13215 25a3e3ea322b7b286388adcd9d208519 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 2.4E-71 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 TVD_13215 25a3e3ea322b7b286388adcd9d208519 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 180 203 2.4E-71 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 TVD_13215 25a3e3ea322b7b286388adcd9d208519 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 206 233 2.4E-71 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 TVD_13215 25a3e3ea322b7b286388adcd9d208519 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 310 335 2.4E-71 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 TVD_13215 25a3e3ea322b7b286388adcd9d208519 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 149 172 2.4E-71 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 TVD_13215 25a3e3ea322b7b286388adcd9d208519 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 2.4E-71 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 TVD_13215 25a3e3ea322b7b286388adcd9d208519 337 SUPERFAMILY SSF56655 5 334 3.66E-114 T 11-10-2018 TVD_13215 25a3e3ea322b7b286388adcd9d208519 337 PIRSF PIRSF500210 1 337 1.6E-126 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 TVD_13215 25a3e3ea322b7b286388adcd9d208519 337 PIRSF PIRSF000904 1 337 2.8E-125 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 TVD_13215 25a3e3ea322b7b286388adcd9d208519 337 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 194 6.3E-68 T 11-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 TVD_01180 adb63a9ae7d19e284a01dd49d342707d 185 Gene3D G3DSA:3.40.80.10 4 184 8.0E-60 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 TVD_01180 adb63a9ae7d19e284a01dd49d342707d 185 SUPERFAMILY SSF55846 8 183 5.5E-67 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 TVD_01180 adb63a9ae7d19e284a01dd49d342707d 185 SMART SM00644 17 168 9.9E-53 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 TVD_01180 adb63a9ae7d19e284a01dd49d342707d 185 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 27 169 1.6E-29 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 TVD_05880 f462c493cb9c4e2afdb2b0d8abfa1db0 445 SUPERFAMILY SSF56176 10 169 2.15E-31 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TVD_05880 f462c493cb9c4e2afdb2b0d8abfa1db0 445 Pfam PF01565 FAD binding domain 6 138 4.2E-17 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TVD_05880 f462c493cb9c4e2afdb2b0d8abfa1db0 445 Gene3D G3DSA:3.30.465.10 47 170 2.7E-32 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TVD_00160 6b2855415a501b990f87aeb85846a825 77 SUPERFAMILY SSF54285 3 77 3.92E-19 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp TVD_00160 6b2855415a501b990f87aeb85846a825 77 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 77 1.2E-19 T 11-10-2018 TVD_00160 6b2855415a501b990f87aeb85846a825 77 Pfam PF02597 ThiS family 5 77 1.5E-18 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 TVD_00160 6b2855415a501b990f87aeb85846a825 77 Gene3D G3DSA:3.10.20.30 2 77 8.0E-20 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TVD_12895 0f1d6d1fbc5714431e4767ecfd97d433 501 SMART SM00382 208 390 1.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_12895 0f1d6d1fbc5714431e4767ecfd97d433 501 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 493 3.8E-28 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain TVD_12895 0f1d6d1fbc5714431e4767ecfd97d433 501 Gene3D G3DSA:3.40.50.300 189 496 2.3E-56 T 11-10-2018 TVD_12895 0f1d6d1fbc5714431e4767ecfd97d433 501 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 140 3.9E-42 T 11-10-2018 TVD_12895 0f1d6d1fbc5714431e4767ecfd97d433 501 SUPERFAMILY SSF52540 188 497 2.05E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_12895 0f1d6d1fbc5714431e4767ecfd97d433 501 Gene3D G3DSA:3.30.230.10 33 168 3.3E-6 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TVD_12895 0f1d6d1fbc5714431e4767ecfd97d433 501 Pfam PF01078 Magnesium chelatase, subunit ChlI 188 390 5.9E-94 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain TVD_12895 0f1d6d1fbc5714431e4767ecfd97d433 501 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 493 9.4E-181 T 11-10-2018 IPR004482 Mg chelatase-related protein TVD_12895 0f1d6d1fbc5714431e4767ecfd97d433 501 SUPERFAMILY SSF54211 6 169 6.83E-28 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_12895 0f1d6d1fbc5714431e4767ecfd97d433 501 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 207 222 2.7E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 TVD_12895 0f1d6d1fbc5714431e4767ecfd97d433 501 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 287 301 2.7E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 TVD_12895 0f1d6d1fbc5714431e4767ecfd97d433 501 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 315 328 2.7E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 TVD_12895 0f1d6d1fbc5714431e4767ecfd97d433 501 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 339 351 2.7E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 TVD_05480 dc62773ba3dfc1b244c610cf66247b2d 214 Gene3D G3DSA:3.20.19.10 1 188 4.7E-76 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 TVD_05480 dc62773ba3dfc1b244c610cf66247b2d 214 SUPERFAMILY SSF52016 1 204 1.49E-61 T 11-10-2018 TVD_05480 dc62773ba3dfc1b244c610cf66247b2d 214 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.105 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 TVD_05480 dc62773ba3dfc1b244c610cf66247b2d 214 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.4E-79 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 TVD_05480 dc62773ba3dfc1b244c610cf66247b2d 214 Pfam PF00694 Aconitase C-terminal domain 1 132 1.2E-34 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 TVD_00600 957bbccd4cf5c78864f7f7eef3c38743 594 SUPERFAMILY SSF52172 25 164 7.12E-39 T 11-10-2018 IPR011006 CheY-like superfamily TVD_00600 957bbccd4cf5c78864f7f7eef3c38743 594 Gene3D G3DSA:3.60.40.10 188 409 1.6E-39 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_00600 957bbccd4cf5c78864f7f7eef3c38743 594 SUPERFAMILY SSF81606 250 399 6.02E-5 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_00600 957bbccd4cf5c78864f7f7eef3c38743 594 SMART SM00448 23 136 1.8E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_00600 957bbccd4cf5c78864f7f7eef3c38743 594 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 209 399 2.3E-36 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_00600 957bbccd4cf5c78864f7f7eef3c38743 594 Gene3D G3DSA:3.40.50.2300 24 172 7.6E-37 T 11-10-2018 TVD_00600 957bbccd4cf5c78864f7f7eef3c38743 594 Pfam PF00072 Response regulator receiver domain 25 136 4.6E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_00600 957bbccd4cf5c78864f7f7eef3c38743 594 Pfam PF13581 Histidine kinase-like ATPase domain 436 574 1.0E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_00600 957bbccd4cf5c78864f7f7eef3c38743 594 SMART SM00331 194 400 1.0E-8 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_00600 957bbccd4cf5c78864f7f7eef3c38743 594 SUPERFAMILY SSF55874 453 563 1.96E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_00600 957bbccd4cf5c78864f7f7eef3c38743 594 Gene3D G3DSA:3.30.565.10 419 584 8.6E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_04420 435e90995546217544a968b6be9971db 701 SUPERFAMILY SSF51120 477 641 5.65E-26 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TVD_04420 435e90995546217544a968b6be9971db 701 SUPERFAMILY SSF51120 277 462 9.72E-27 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TVD_04420 435e90995546217544a968b6be9971db 701 PRINTS PR00313 NodO calcium binding signature 319 327 1.5E-11 T 11-10-2018 TVD_04420 435e90995546217544a968b6be9971db 701 PRINTS PR00313 NodO calcium binding signature 355 364 1.5E-11 T 11-10-2018 TVD_04420 435e90995546217544a968b6be9971db 701 PRINTS PR00313 NodO calcium binding signature 125 136 1.5E-11 T 11-10-2018 TVD_04420 435e90995546217544a968b6be9971db 701 PRINTS PR00313 NodO calcium binding signature 328 336 1.5E-11 T 11-10-2018 TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF06594 Haemolysin-type calcium binding protein related domain 221 265 2.8E-8 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF06594 Haemolysin-type calcium binding protein related domain 21 65 2.8E-8 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF06594 Haemolysin-type calcium binding protein related domain 421 465 2.8E-8 T 11-10-2018 IPR010566 Haemolysin-type calcium binding-related TVD_04420 435e90995546217544a968b6be9971db 701 SUPERFAMILY SSF51120 121 238 9.68E-18 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TVD_04420 435e90995546217544a968b6be9971db 701 Gene3D G3DSA:2.150.10.10 279 329 2.0E-13 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TVD_04420 435e90995546217544a968b6be9971db 701 Gene3D G3DSA:2.150.10.10 330 473 9.4E-25 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TVD_04420 435e90995546217544a968b6be9971db 701 Gene3D G3DSA:2.150.10.10 527 673 3.9E-31 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TVD_04420 435e90995546217544a968b6be9971db 701 Gene3D G3DSA:2.150.10.10 129 273 2.6E-24 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TVD_04420 435e90995546217544a968b6be9971db 701 Gene3D G3DSA:2.150.10.10 46 128 2.6E-14 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 110 126 7.5E-4 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 310 326 4.6E-4 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 527 544 0.001 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 492 508 0.0011 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 547 561 4.7 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 327 344 0.079 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 87 97 4.4 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 346 362 0.014 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 387 402 54.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 510 526 5.9E-4 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 146 162 0.022 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 187 202 54.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 127 144 0.11 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TVD_04420 435e90995546217544a968b6be9971db 701 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 292 308 0.0055 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TVD_04420 435e90995546217544a968b6be9971db 701 Gene3D G3DSA:2.150.10.10 475 526 1.9E-13 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TVD_04420 435e90995546217544a968b6be9971db 701 SUPERFAMILY SSF51120 77 141 4.97E-17 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TVD_11320 c5458725b91fd0e2896ce2e3145684b4 112 SUPERFAMILY SSF54913 1 112 3.5E-46 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TVD_11320 c5458725b91fd0e2896ce2e3145684b4 112 Gene3D G3DSA:3.30.70.120 1 112 9.5E-49 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TVD_11320 c5458725b91fd0e2896ce2e3145684b4 112 PIRSF PIRSF039144 1 112 6.7E-56 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TVD_11320 c5458725b91fd0e2896ce2e3145684b4 112 PRINTS PR00340 P-II protein signature 2 17 9.4E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TVD_11320 c5458725b91fd0e2896ce2e3145684b4 112 PRINTS PR00340 P-II protein signature 83 103 9.4E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TVD_11320 c5458725b91fd0e2896ce2e3145684b4 112 PRINTS PR00340 P-II protein signature 23 41 9.4E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TVD_11320 c5458725b91fd0e2896ce2e3145684b4 112 PRINTS PR00340 P-II protein signature 52 75 9.4E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TVD_11320 c5458725b91fd0e2896ce2e3145684b4 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 TVD_11320 c5458725b91fd0e2896ce2e3145684b4 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.8E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TVD_11320 c5458725b91fd0e2896ce2e3145684b4 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 TVD_11320 c5458725b91fd0e2896ce2e3145684b4 112 SMART SM00938 4 105 6.5E-68 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TVD_06365 a24cb4e749256daeddc882838d37c6ae 300 Pfam PF00691 OmpA family 163 261 5.7E-18 T 11-10-2018 IPR006665 OmpA-like domain TVD_06365 a24cb4e749256daeddc882838d37c6ae 300 Gene3D G3DSA:3.30.1330.60 116 274 2.0E-45 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_06365 a24cb4e749256daeddc882838d37c6ae 300 SUPERFAMILY SSF103088 155 269 5.62E-30 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_06365 a24cb4e749256daeddc882838d37c6ae 300 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 56 3.9E-20 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain TVD_03295 444c721d5d40b1492f99f6e4798d245d 170 SUPERFAMILY SSF50346 83 144 3.45E-17 T 11-10-2018 IPR011033 PRC-barrel-like superfamily TVD_03295 444c721d5d40b1492f99f6e4798d245d 170 Gene3D G3DSA:2.30.30.240 73 164 8.0E-27 T 11-10-2018 TVD_03295 444c721d5d40b1492f99f6e4798d245d 170 Pfam PF05239 PRC-barrel domain 82 159 3.4E-17 T 11-10-2018 IPR027275 PRC-barrel domain TVD_06350 bb56d061b4c1af55658733643607b8d5 687 SUPERFAMILY SSF47384 288 347 2.51E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 393 533 2.5E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_06350 bb56d061b4c1af55658733643607b8d5 687 SMART SM00260 526 665 1.3E-37 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 Gene3D G3DSA:1.10.287.560 287 346 1.0E-19 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 Gene3D G3DSA:2.40.50.180 557 620 5.3E-39 T 11-10-2018 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 SUPERFAMILY SSF50341 533 665 5.75E-32 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 Gene3D G3DSA:2.30.30.40 534 661 5.3E-39 T 11-10-2018 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 450 4.3E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 531 4.3E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 4.3E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 SMART SM01231 286 346 8.4E-18 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 SMART SM00073 6 103 1.5E-23 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 SMART SM00387 391 534 2.0E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_06350 bb56d061b4c1af55658733643607b8d5 687 Pfam PF01584 CheW-like domain 539 666 8.8E-27 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 SUPERFAMILY SSF47226 7 129 1.57E-32 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 Gene3D G3DSA:3.30.565.10 347 533 4.2E-55 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_06350 bb56d061b4c1af55658733643607b8d5 687 Pfam PF01627 Hpt domain 8 99 9.6E-18 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 287 346 5.2E-12 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 Gene3D G3DSA:1.20.120.160 4 140 5.6E-37 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 TVD_06350 bb56d061b4c1af55658733643607b8d5 687 SUPERFAMILY SSF55874 349 532 4.71E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_02955 d478bd0ee9982368f276e15e218b8595 310 Gene3D G3DSA:3.40.1190.20 1 310 1.8E-103 T 11-10-2018 IPR029056 Ribokinase-like TVD_02955 d478bd0ee9982368f276e15e218b8595 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TVD_02955 d478bd0ee9982368f276e15e218b8595 310 Pfam PF00294 pfkB family carbohydrate kinase 34 290 6.1E-37 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB TVD_02955 d478bd0ee9982368f276e15e218b8595 310 SUPERFAMILY SSF53613 2 297 4.99E-60 T 11-10-2018 IPR029056 Ribokinase-like TVD_09455 c0e590a64fd68075bdf1ce1f6044e21f 99 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 26 45 - T 11-10-2018 IPR020808 Bacterial microcompartments protein, conserved site TVD_09455 c0e590a64fd68075bdf1ce1f6044e21f 99 Pfam PF00936 BMC domain 9 84 8.2E-24 T 11-10-2018 IPR000249 Microcompartment protein, bacteria TVD_09455 c0e590a64fd68075bdf1ce1f6044e21f 99 Gene3D G3DSA:3.30.70.1710 3 99 5.4E-34 T 11-10-2018 TVD_09455 c0e590a64fd68075bdf1ce1f6044e21f 99 SUPERFAMILY SSF143414 9 94 2.88E-26 T 11-10-2018 IPR037233 CcmK-like superfamily TVD_09455 c0e590a64fd68075bdf1ce1f6044e21f 99 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 9 70 9.0E-28 T 11-10-2018 TVD_09455 c0e590a64fd68075bdf1ce1f6044e21f 99 SMART SM00877 8 85 8.0E-28 T 11-10-2018 IPR000249 Microcompartment protein, bacteria TVD_07970 f72f5f51d63b67a5d0e44ea8f05aef3e 119 Gene3D G3DSA:1.10.1900.20 56 118 7.3E-26 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_07970 f72f5f51d63b67a5d0e44ea8f05aef3e 119 Gene3D G3DSA:1.10.720.90 2 55 3.9E-27 T 11-10-2018 TVD_07970 f72f5f51d63b67a5d0e44ea8f05aef3e 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 71 3.0E-18 T 11-10-2018 TVD_07970 f72f5f51d63b67a5d0e44ea8f05aef3e 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.5E-40 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_07970 f72f5f51d63b67a5d0e44ea8f05aef3e 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.5E-40 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_07970 f72f5f51d63b67a5d0e44ea8f05aef3e 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.5E-40 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_07970 f72f5f51d63b67a5d0e44ea8f05aef3e 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.248 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_07970 f72f5f51d63b67a5d0e44ea8f05aef3e 119 SUPERFAMILY SSF74731 2 117 9.29E-50 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_07970 f72f5f51d63b67a5d0e44ea8f05aef3e 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_07970 f72f5f51d63b67a5d0e44ea8f05aef3e 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.0E-49 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_07970 f72f5f51d63b67a5d0e44ea8f05aef3e 119 Pfam PF00453 Ribosomal protein L20 3 108 1.2E-48 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_09475 0d2313ccec2c5039b0dad363531cbc93 937 Pfam PF12288 Carboxysome shell peptide mid-region 793 885 2.8E-5 T 11-10-2018 IPR020990 Carboxysome shell protein TVD_09475 0d2313ccec2c5039b0dad363531cbc93 937 Pfam PF12288 Carboxysome shell peptide mid-region 194 570 3.3E-115 T 11-10-2018 IPR020990 Carboxysome shell protein TVD_09475 0d2313ccec2c5039b0dad363531cbc93 937 Pfam PF12288 Carboxysome shell peptide mid-region 404 745 2.3E-110 T 11-10-2018 IPR020990 Carboxysome shell protein TVD_06505 a74d0d7c765a9bdffb267cbdb6b64b3c 293 Gene3D G3DSA:1.10.3660.10 179 283 5.7E-37 T 11-10-2018 TVD_06505 a74d0d7c765a9bdffb267cbdb6b64b3c 293 SUPERFAMILY SSF48179 175 284 8.16E-36 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TVD_06505 a74d0d7c765a9bdffb267cbdb6b64b3c 293 Pfam PF02153 Prephenate dehydrogenase 17 270 2.4E-69 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 TVD_06505 a74d0d7c765a9bdffb267cbdb6b64b3c 293 Gene3D G3DSA:3.40.50.720 2 178 5.9E-54 T 11-10-2018 TVD_06505 a74d0d7c765a9bdffb267cbdb6b64b3c 293 SUPERFAMILY SSF51735 4 172 6.0E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_01765 0a9009754e37882cb1cb5c529aba4878 389 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 33 170 5.6E-60 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 TVD_01765 0a9009754e37882cb1cb5c529aba4878 389 Pfam PF01966 HD domain 71 201 1.6E-15 T 11-10-2018 IPR006674 HD domain TVD_01765 0a9009754e37882cb1cb5c529aba4878 389 Gene3D G3DSA:1.10.3210.10 3 384 6.4E-135 T 11-10-2018 TVD_01765 0a9009754e37882cb1cb5c529aba4878 389 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 11 383 38.63 T 11-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 TVD_01765 0a9009754e37882cb1cb5c529aba4878 389 SMART SM00471 67 211 3.1E-11 T 11-10-2018 IPR003607 HD/PDEase domain TVD_01765 0a9009754e37882cb1cb5c529aba4878 389 Pfam PF13286 Phosphohydrolase-associated domain 288 381 1.8E-28 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain TVD_01765 0a9009754e37882cb1cb5c529aba4878 389 SUPERFAMILY SSF109604 33 384 1.69E-90 T 11-10-2018 TVD_01830 c372457d24ab78bb9fb3f27c7fd9cd31 180 SUPERFAMILY SSF52540 1 165 5.76E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01830 c372457d24ab78bb9fb3f27c7fd9cd31 180 PRINTS PR01100 Shikimate kinase family signature 94 111 1.5E-24 T 11-10-2018 TVD_01830 c372457d24ab78bb9fb3f27c7fd9cd31 180 PRINTS PR01100 Shikimate kinase family signature 28 41 1.5E-24 T 11-10-2018 TVD_01830 c372457d24ab78bb9fb3f27c7fd9cd31 180 PRINTS PR01100 Shikimate kinase family signature 56 64 1.5E-24 T 11-10-2018 TVD_01830 c372457d24ab78bb9fb3f27c7fd9cd31 180 PRINTS PR01100 Shikimate kinase family signature 74 83 1.5E-24 T 11-10-2018 TVD_01830 c372457d24ab78bb9fb3f27c7fd9cd31 180 PRINTS PR01100 Shikimate kinase family signature 4 19 1.5E-24 T 11-10-2018 TVD_01830 c372457d24ab78bb9fb3f27c7fd9cd31 180 Hamap MF_00109 Shikimate kinase [aroK]. 1 167 28.58 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 TVD_01830 c372457d24ab78bb9fb3f27c7fd9cd31 180 ProSitePatterns PS01128 Shikimate kinase signature. 57 82 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 TVD_01830 c372457d24ab78bb9fb3f27c7fd9cd31 180 Gene3D G3DSA:3.40.50.300 1 175 7.6E-56 T 11-10-2018 TVD_01830 c372457d24ab78bb9fb3f27c7fd9cd31 180 Pfam PF01202 Shikimate kinase 10 164 1.4E-48 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 TVD_01965 cee634ca8b73f7b14145ff02f05ab9e5 355 Pfam PF00793 DAHP synthetase I family 41 337 1.8E-102 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TVD_01965 cee634ca8b73f7b14145ff02f05ab9e5 355 PIRSF PIRSF001361 1 352 4.2E-160 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 TVD_01965 cee634ca8b73f7b14145ff02f05ab9e5 355 Gene3D G3DSA:3.20.20.70 1 350 2.3E-161 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_01965 cee634ca8b73f7b14145ff02f05ab9e5 355 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 7.4E-159 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 TVD_01965 cee634ca8b73f7b14145ff02f05ab9e5 355 SUPERFAMILY SSF51569 7 348 1.78E-133 T 11-10-2018 TVD_02320 6d7296afffce4ae5158c9f549f6af130 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 1.3E-45 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02320 6d7296afffce4ae5158c9f549f6af130 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 125 24.545 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02320 6d7296afffce4ae5158c9f549f6af130 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 125 8.0E-20 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02320 6d7296afffce4ae5158c9f549f6af130 125 Gene3D G3DSA:3.30.1390.10 57 125 1.5E-29 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TVD_02320 6d7296afffce4ae5158c9f549f6af130 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 125 2.7E-30 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02320 6d7296afffce4ae5158c9f549f6af130 125 SUPERFAMILY SSF54736 56 125 6.1E-24 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TVD_02320 6d7296afffce4ae5158c9f549f6af130 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 3.6E-18 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02320 6d7296afffce4ae5158c9f549f6af130 125 SUPERFAMILY SSF48300 4 61 1.96E-15 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02320 6d7296afffce4ae5158c9f549f6af130 125 Gene3D G3DSA:1.20.5.710 2 56 2.8E-19 T 11-10-2018 TVD_03490 937392b66aa379400205e3b7708a93ad 225 SUPERFAMILY SSF52833 3 68 2.39E-6 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_03490 937392b66aa379400205e3b7708a93ad 225 Gene3D G3DSA:3.40.30.10 4 78 1.6E-6 T 11-10-2018 TVD_03490 937392b66aa379400205e3b7708a93ad 225 Gene3D G3DSA:1.20.1050.10 79 193 1.6E-6 T 11-10-2018 TVD_03490 937392b66aa379400205e3b7708a93ad 225 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 75 2.2E-8 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TVD_11115 e399493fd7090ace54e5f5abc4e209dd 220 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 8.4E-65 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 TVD_11115 e399493fd7090ace54e5f5abc4e209dd 220 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 32.839 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 TVD_11115 e399493fd7090ace54e5f5abc4e209dd 220 Gene3D G3DSA:3.30.70.260 125 195 1.7E-73 T 11-10-2018 TVD_11115 e399493fd7090ace54e5f5abc4e209dd 220 Gene3D G3DSA:3.40.50.1360 7 209 1.7E-73 T 11-10-2018 TVD_11115 e399493fd7090ace54e5f5abc4e209dd 220 SUPERFAMILY SSF100950 1 146 6.51E-45 T 11-10-2018 IPR037171 NagB/RpiA transferase-like TVD_11115 e399493fd7090ace54e5f5abc4e209dd 220 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 2.5E-56 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 TVD_11115 e399493fd7090ace54e5f5abc4e209dd 220 SUPERFAMILY SSF75445 127 198 1.96E-23 T 11-10-2018 TVD_08070 5f269d0360427232a09ff16b77039680 477 Pfam PF00301 Rubredoxin 10 56 1.5E-23 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 TVD_08070 5f269d0360427232a09ff16b77039680 477 PRINTS PR00163 Rubredoxin signature 40 56 4.2E-10 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 TVD_08070 5f269d0360427232a09ff16b77039680 477 PRINTS PR00163 Rubredoxin signature 10 26 4.2E-10 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 TVD_08070 5f269d0360427232a09ff16b77039680 477 Gene3D G3DSA:3.50.50.60 190 330 3.0E-70 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_08070 5f269d0360427232a09ff16b77039680 477 Gene3D G3DSA:3.50.50.60 88 365 3.0E-70 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_08070 5f269d0360427232a09ff16b77039680 477 Gene3D G3DSA:2.20.28.10 2 63 3.7E-27 T 11-10-2018 TVD_08070 5f269d0360427232a09ff16b77039680 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 2.7E-22 T 11-10-2018 TVD_08070 5f269d0360427232a09ff16b77039680 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 343 365 2.7E-22 T 11-10-2018 TVD_08070 5f269d0360427232a09ff16b77039680 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 318 334 2.7E-22 T 11-10-2018 TVD_08070 5f269d0360427232a09ff16b77039680 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 87 106 2.7E-22 T 11-10-2018 TVD_08070 5f269d0360427232a09ff16b77039680 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 250 2.7E-22 T 11-10-2018 TVD_08070 5f269d0360427232a09ff16b77039680 477 SUPERFAMILY SSF51905 87 391 9.91E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_08070 5f269d0360427232a09ff16b77039680 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 87 365 2.2E-45 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TVD_08070 5f269d0360427232a09ff16b77039680 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 86 108 8.2E-11 T 11-10-2018 TVD_08070 5f269d0360427232a09ff16b77039680 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 319 333 8.2E-11 T 11-10-2018 TVD_08070 5f269d0360427232a09ff16b77039680 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 358 365 8.2E-11 T 11-10-2018 TVD_08070 5f269d0360427232a09ff16b77039680 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 257 8.2E-11 T 11-10-2018 TVD_08070 5f269d0360427232a09ff16b77039680 477 SUPERFAMILY SSF57802 8 62 3.53E-22 T 11-10-2018 TVD_08070 5f269d0360427232a09ff16b77039680 477 Gene3D G3DSA:3.30.390.120 403 464 2.4E-7 T 11-10-2018 TVD_12995 c096754387019cfe6687ad591846e1d4 215 Pfam PF13511 Domain of unknown function (DUF4124) 12 55 2.6E-14 T 11-10-2018 IPR025392 Domain of unknown function DUF4124 TVD_12995 c096754387019cfe6687ad591846e1d4 215 Gene3D G3DSA:2.60.40.10 86 180 8.6E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold TVD_12995 c096754387019cfe6687ad591846e1d4 215 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 81 163 2.8E-6 T 11-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_10375 08576af242ed6912434003dd0b61d4f4 231 Pfam PF13394 4Fe-4S single cluster domain 44 124 4.3E-9 T 11-10-2018 TVD_10375 08576af242ed6912434003dd0b61d4f4 231 Pfam PF04055 Radical SAM superfamily 45 121 3.4E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TVD_10375 08576af242ed6912434003dd0b61d4f4 231 PIRSF PIRSF000370 20 231 1.4E-65 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 TVD_10375 08576af242ed6912434003dd0b61d4f4 231 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 22 228 35.133 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 TVD_10375 08576af242ed6912434003dd0b61d4f4 231 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 22 231 1.7E-102 T 11-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE TVD_10375 08576af242ed6912434003dd0b61d4f4 231 Gene3D G3DSA:3.20.20.70 22 225 3.8E-33 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_10375 08576af242ed6912434003dd0b61d4f4 231 SUPERFAMILY SSF102114 47 120 1.7E-12 T 11-10-2018 TVD_02465 95cf4b0e1489252b67b42e903552a48c 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.967 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02465 95cf4b0e1489252b67b42e903552a48c 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.2E-51 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02465 95cf4b0e1489252b67b42e903552a48c 118 SUPERFAMILY SSF46946 2 114 4.71E-43 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 TVD_02465 95cf4b0e1489252b67b42e903552a48c 118 Gene3D G3DSA:1.10.8.50 1 71 4.7E-25 T 11-10-2018 TVD_02465 95cf4b0e1489252b67b42e903552a48c 118 Gene3D G3DSA:4.10.910.10 72 118 4.4E-25 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02465 95cf4b0e1489252b67b42e903552a48c 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02465 95cf4b0e1489252b67b42e903552a48c 118 Pfam PF00416 Ribosomal protein S13/S18 3 62 4.4E-13 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02465 95cf4b0e1489252b67b42e903552a48c 118 Pfam PF00416 Ribosomal protein S13/S18 64 108 4.3E-17 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02465 95cf4b0e1489252b67b42e903552a48c 118 PIRSF PIRSF002134 1 118 3.8E-38 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_00325 ebb84683ec5a62e52a8f289c865fcca0 301 SUPERFAMILY SSF88713 11 258 5.19E-47 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TVD_00325 ebb84683ec5a62e52a8f289c865fcca0 301 Pfam PF01522 Polysaccharide deacetylase 38 150 3.8E-22 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 TVD_00325 ebb84683ec5a62e52a8f289c865fcca0 301 Gene3D G3DSA:3.20.20.370 6 284 1.4E-47 T 11-10-2018 TVD_00325 ebb84683ec5a62e52a8f289c865fcca0 301 TIGRFAM TIGR03006 pepcterm_polyde: polysaccharide deacetylase family protein, PEP-CTERM locus subfamily 10 279 1.4E-134 T 11-10-2018 IPR014344 PEP-CTERM locus, polysaccharide deactylase TVD_00325 ebb84683ec5a62e52a8f289c865fcca0 301 Pfam PF11959 Domain of unknown function (DUF3473) 152 279 5.4E-53 T 11-10-2018 IPR022560 Domain of unknown function DUF3473 TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 Pfam PF13188 PAS domain 98 163 2.5E-6 T 11-10-2018 IPR000014 PAS domain TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 425 8.2E-124 T 11-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 428 4.5E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 SUPERFAMILY SSF55785 90 196 3.49E-9 T 11-10-2018 IPR035965 PAS domain superfamily TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 SMART SM00387 317 429 2.4E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 272 1.1E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 Gene3D G3DSA:3.30.565.10 287 434 7.5E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 Gene3D G3DSA:1.10.287.130 202 275 1.5E-21 T 11-10-2018 TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 SUPERFAMILY SSF47384 192 273 2.94E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 SMART SM00091 98 164 3.4E-6 T 11-10-2018 IPR000014 PAS domain TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 8.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 8.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 8.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 8.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 Gene3D G3DSA:3.30.450.20 87 201 2.7E-7 T 11-10-2018 TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 Pfam PF11808 Domain of unknown function (DUF3329) 7 90 6.3E-22 T 11-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 SUPERFAMILY SSF55874 261 429 1.96E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_08345 7e32738ac86338d76a215aa1736cba4a 440 SMART SM00388 206 272 4.2E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 2.6E-131 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 Pfam PF00344 SecY translocase 76 418 2.6E-115 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 2.1E-95 T 11-10-2018 TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 273 292 2.1E-95 T 11-10-2018 TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 2.1E-95 T 11-10-2018 TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 155 180 2.1E-95 T 11-10-2018 TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 181 204 2.1E-95 T 11-10-2018 TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 2.1E-95 T 11-10-2018 TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 2.1E-95 T 11-10-2018 TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 2.1E-95 T 11-10-2018 TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 2.1E-95 T 11-10-2018 TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 Gene3D G3DSA:1.10.3370.10 13 430 7.1E-160 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 434 29.469 T 11-10-2018 IPR026593 Protein translocase subunit SecY TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 ProSitePatterns PS00756 Protein secY signature 2. 174 191 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 PIRSF PIRSF004557 13 441 1.9E-124 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TVD_02460 c44b806c7b43c7e4a5b7962c98e07af5 448 SUPERFAMILY SSF103491 15 425 9.15E-131 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TVD_04920 3b09eae2085dea2a381b860993869c31 256 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 13 241 2.7E-57 T 11-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW TVD_04920 3b09eae2085dea2a381b860993869c31 256 SMART SM00028 72 105 0.0015 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_04920 3b09eae2085dea2a381b860993869c31 256 SMART SM00028 38 71 4.8E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_04920 3b09eae2085dea2a381b860993869c31 256 SMART SM00028 106 139 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_04920 3b09eae2085dea2a381b860993869c31 256 SMART SM00028 142 175 0.62 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_04920 3b09eae2085dea2a381b860993869c31 256 Gene3D G3DSA:1.25.40.10 33 252 2.1E-47 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_04920 3b09eae2085dea2a381b860993869c31 256 SUPERFAMILY SSF81901 40 242 5.75E-26 T 11-10-2018 TVD_04920 3b09eae2085dea2a381b860993869c31 256 Pfam PF13432 Tetratricopeptide repeat 112 176 3.3E-9 T 11-10-2018 TVD_04920 3b09eae2085dea2a381b860993869c31 256 Pfam PF13432 Tetratricopeptide repeat 44 106 3.0E-8 T 11-10-2018 TVD_02265 c1101dce67f163e27862ddf92dcf447e 572 Gene3D G3DSA:3.30.300.160 67 146 2.8E-6 T 11-10-2018 TVD_02265 c1101dce67f163e27862ddf92dcf447e 572 Gene3D G3DSA:3.30.450.90 163 295 6.9E-52 T 11-10-2018 TVD_02265 c1101dce67f163e27862ddf92dcf447e 572 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 390 404 - T 11-10-2018 IPR001482 Type II/IV secretion system protein TVD_02265 c1101dce67f163e27862ddf92dcf447e 572 SUPERFAMILY SSF160246 8 145 1.73E-34 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily TVD_02265 c1101dce67f163e27862ddf92dcf447e 572 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 12 572 6.7E-254 T 11-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 TVD_02265 c1101dce67f163e27862ddf92dcf447e 572 Gene3D G3DSA:3.40.50.300 297 572 9.8E-105 T 11-10-2018 TVD_02265 c1101dce67f163e27862ddf92dcf447e 572 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 46 149 6.0E-19 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal TVD_02265 c1101dce67f163e27862ddf92dcf447e 572 Pfam PF00437 Type II/IV secretion system protein 195 462 1.2E-91 T 11-10-2018 IPR001482 Type II/IV secretion system protein TVD_02265 c1101dce67f163e27862ddf92dcf447e 572 SUPERFAMILY SSF52540 182 570 9.37E-97 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04280 09447577051713ef766d6337d849a856 420 Gene3D G3DSA:1.10.4160.10 3 413 1.3E-40 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily TVD_04280 09447577051713ef766d6337d849a856 420 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 355 4.4E-27 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 TVD_01995 ccd804ab235cdc33403a74fb9a3aa1a1 107 SUPERFAMILY SSF82657 1 87 3.79E-30 T 11-10-2018 IPR036065 BolA-like superfamily TVD_01995 ccd804ab235cdc33403a74fb9a3aa1a1 107 Gene3D G3DSA:3.30.300.90 1 89 8.5E-35 T 11-10-2018 TVD_01995 ccd804ab235cdc33403a74fb9a3aa1a1 107 Pfam PF01722 BolA-like protein 11 84 1.6E-31 T 11-10-2018 IPR002634 BolA protein TVD_01995 ccd804ab235cdc33403a74fb9a3aa1a1 107 PIRSF PIRSF003113 1 100 7.1E-37 T 11-10-2018 IPR002634 BolA protein TVD_09115 d9297935da7a71f514432c34554320ee 665 Pfam PF07676 WD40-like Beta Propeller Repeat 213 245 8.7E-5 T 11-10-2018 IPR011659 WD40-like Beta Propeller TVD_09115 d9297935da7a71f514432c34554320ee 665 Pfam PF07676 WD40-like Beta Propeller Repeat 82 109 0.0019 T 11-10-2018 IPR011659 WD40-like Beta Propeller TVD_09115 d9297935da7a71f514432c34554320ee 665 Pfam PF07676 WD40-like Beta Propeller Repeat 256 279 0.11 T 11-10-2018 IPR011659 WD40-like Beta Propeller TVD_09115 d9297935da7a71f514432c34554320ee 665 SUPERFAMILY SSF82171 36 393 9.03E-40 T 11-10-2018 TVD_09115 d9297935da7a71f514432c34554320ee 665 Gene3D G3DSA:3.40.50.1820 404 664 1.5E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_09115 d9297935da7a71f514432c34554320ee 665 Pfam PF00326 Prolyl oligopeptidase family 457 662 7.5E-44 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 TVD_09115 d9297935da7a71f514432c34554320ee 665 SUPERFAMILY SSF53474 408 663 3.33E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_09115 d9297935da7a71f514432c34554320ee 665 Gene3D G3DSA:2.120.10.30 175 403 3.7E-25 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TVD_09115 d9297935da7a71f514432c34554320ee 665 Gene3D G3DSA:2.120.10.30 25 174 8.3E-21 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TVD_09590 cd42faff45e0dd14b275e983691532cf 303 PIRSF PIRSF000103 7 302 1.0E-68 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 TVD_09590 cd42faff45e0dd14b275e983691532cf 303 SUPERFAMILY SSF48179 172 293 7.37E-31 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TVD_09590 cd42faff45e0dd14b275e983691532cf 303 Gene3D G3DSA:3.40.50.720 10 171 6.4E-53 T 11-10-2018 TVD_09590 cd42faff45e0dd14b275e983691532cf 303 SUPERFAMILY SSF51735 12 171 8.32E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_09590 cd42faff45e0dd14b275e983691532cf 303 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 174 293 3.0E-29 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 TVD_09590 cd42faff45e0dd14b275e983691532cf 303 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 13 171 1.2E-47 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 TVD_09590 cd42faff45e0dd14b275e983691532cf 303 Gene3D G3DSA:1.10.1040.10 172 296 1.6E-31 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TVD_02395 e90b8b3a77bb52261d7c38d7ae4ad865 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 4.1E-49 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 TVD_02395 e90b8b3a77bb52261d7c38d7ae4ad865 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 3.0E-61 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02395 e90b8b3a77bb52261d7c38d7ae4ad865 137 SUPERFAMILY SSF54686 1 134 2.88E-56 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 TVD_02395 e90b8b3a77bb52261d7c38d7ae4ad865 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02395 e90b8b3a77bb52261d7c38d7ae4ad865 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02395 e90b8b3a77bb52261d7c38d7ae4ad865 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.761 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02395 e90b8b3a77bb52261d7c38d7ae4ad865 137 Gene3D G3DSA:3.90.1170.10 1 137 2.7E-57 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 TVD_02395 e90b8b3a77bb52261d7c38d7ae4ad865 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.8E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02395 e90b8b3a77bb52261d7c38d7ae4ad865 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.8E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02395 e90b8b3a77bb52261d7c38d7ae4ad865 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.8E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02395 e90b8b3a77bb52261d7c38d7ae4ad865 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.8E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_12705 ee6a7b956128683982ebddfd48d8879e 344 SUPERFAMILY SSF52540 5 336 1.29E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_12705 ee6a7b956128683982ebddfd48d8879e 344 Pfam PF00437 Type II/IV secretion system protein 12 270 9.2E-45 T 11-10-2018 IPR001482 Type II/IV secretion system protein TVD_12705 ee6a7b956128683982ebddfd48d8879e 344 SMART SM00382 122 288 0.0061 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_12705 ee6a7b956128683982ebddfd48d8879e 344 Gene3D G3DSA:3.40.50.300 101 344 8.1E-104 T 11-10-2018 TVD_12705 ee6a7b956128683982ebddfd48d8879e 344 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-10-2018 IPR001482 Type II/IV secretion system protein TVD_12705 ee6a7b956128683982ebddfd48d8879e 344 Gene3D G3DSA:3.30.450.90 1 100 2.1E-35 T 11-10-2018 TVD_12705 ee6a7b956128683982ebddfd48d8879e 344 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 1.6E-149 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 TVD_06800 4e878f99d005f8b2a589e0511afe60a5 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.8E-16 T 11-10-2018 IPR000362 Fumarate lyase family TVD_06800 4e878f99d005f8b2a589e0511afe60a5 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.8E-16 T 11-10-2018 IPR000362 Fumarate lyase family TVD_06800 4e878f99d005f8b2a589e0511afe60a5 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.8E-16 T 11-10-2018 IPR000362 Fumarate lyase family TVD_06800 4e878f99d005f8b2a589e0511afe60a5 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.8E-16 T 11-10-2018 IPR000362 Fumarate lyase family TVD_06800 4e878f99d005f8b2a589e0511afe60a5 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.2E-47 T 11-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 TVD_06800 4e878f99d005f8b2a589e0511afe60a5 455 Gene3D G3DSA:1.10.40.30 382 445 4.1E-147 T 11-10-2018 TVD_06800 4e878f99d005f8b2a589e0511afe60a5 455 Pfam PF00206 Lyase 14 312 1.4E-52 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal TVD_06800 4e878f99d005f8b2a589e0511afe60a5 455 Gene3D G3DSA:1.20.200.10 118 446 4.1E-147 T 11-10-2018 TVD_06800 4e878f99d005f8b2a589e0511afe60a5 455 Gene3D G3DSA:1.10.275.10 1 117 1.7E-41 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal TVD_06800 4e878f99d005f8b2a589e0511afe60a5 455 SUPERFAMILY SSF48557 2 439 5.5E-98 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 TVD_06800 4e878f99d005f8b2a589e0511afe60a5 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 451 1.1E-115 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TVD_06800 4e878f99d005f8b2a589e0511afe60a5 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 TVD_11545 4e556d8eb50ff93c5d914e4ee0cc9a61 181 SUPERFAMILY SSF89392 14 175 1.41E-10 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX TVD_11545 4e556d8eb50ff93c5d914e4ee0cc9a61 181 Gene3D G3DSA:2.50.20.10 18 180 4.6E-13 T 11-10-2018 TVD_13070 ed8751feafec107b4149829872aa93aa 294 Pfam PF00294 pfkB family carbohydrate kinase 22 280 2.9E-38 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB TVD_13070 ed8751feafec107b4149829872aa93aa 294 Gene3D G3DSA:3.40.1190.20 6 285 6.2E-64 T 11-10-2018 IPR029056 Ribokinase-like TVD_13070 ed8751feafec107b4149829872aa93aa 294 SUPERFAMILY SSF53613 9 279 6.08E-50 T 11-10-2018 IPR029056 Ribokinase-like TVD_13070 ed8751feafec107b4149829872aa93aa 294 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 27 51 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TVD_10290 2e3e5b39e98033033ac2c60b3b03294a 538 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_10290 2e3e5b39e98033033ac2c60b3b03294a 538 SUPERFAMILY SSF52540 1 254 2.5E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10290 2e3e5b39e98033033ac2c60b3b03294a 538 Pfam PF00005 ABC transporter 20 182 1.2E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_10290 2e3e5b39e98033033ac2c60b3b03294a 538 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_10290 2e3e5b39e98033033ac2c60b3b03294a 538 SMART SM00382 312 505 5.7E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_10290 2e3e5b39e98033033ac2c60b3b03294a 538 SMART SM00382 28 232 1.7E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_10290 2e3e5b39e98033033ac2c60b3b03294a 538 Gene3D G3DSA:3.40.50.300 1 268 3.6E-81 T 11-10-2018 TVD_10290 2e3e5b39e98033033ac2c60b3b03294a 538 Gene3D G3DSA:3.40.50.300 274 537 1.0E-83 T 11-10-2018 TVD_10290 2e3e5b39e98033033ac2c60b3b03294a 538 SUPERFAMILY SSF52540 278 527 6.82E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10290 2e3e5b39e98033033ac2c60b3b03294a 538 Pfam PF00005 ABC transporter 304 456 3.7E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_10290 2e3e5b39e98033033ac2c60b3b03294a 538 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 508 535 0.012 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TVD_10290 2e3e5b39e98033033ac2c60b3b03294a 538 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 265 0.019 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TVD_00905 e797d3d764a3a0179e0e4fd7e7f2bd3d 517 Pfam PF00583 Acetyltransferase (GNAT) family 26 145 1.1E-7 T 11-10-2018 IPR000182 GNAT domain TVD_00905 e797d3d764a3a0179e0e4fd7e7f2bd3d 517 SUPERFAMILY SSF55729 17 145 2.53E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_00905 e797d3d764a3a0179e0e4fd7e7f2bd3d 517 SUPERFAMILY SSF56317 230 512 2.09E-56 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TVD_00905 e797d3d764a3a0179e0e4fd7e7f2bd3d 517 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 376 396 - T 11-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site TVD_00905 e797d3d764a3a0179e0e4fd7e7f2bd3d 517 Gene3D G3DSA:3.40.630.30 8 226 8.8E-56 T 11-10-2018 TVD_00905 e797d3d764a3a0179e0e4fd7e7f2bd3d 517 Pfam PF00795 Carbon-nitrogen hydrolase 232 492 1.1E-35 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TVD_00905 e797d3d764a3a0179e0e4fd7e7f2bd3d 517 Gene3D G3DSA:3.60.110.10 228 515 2.6E-56 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TVD_11640 92c0e339a068dce8d837577262e4387e 188 SUPERFAMILY SSF51064 123 178 2.35E-19 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 TVD_11640 92c0e339a068dce8d837577262e4387e 188 Hamap MF_01151 Protein GrpE [grpE]. 3 177 20.751 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TVD_11640 92c0e339a068dce8d837577262e4387e 188 ProSitePatterns PS01071 grpE protein signature. 132 175 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TVD_11640 92c0e339a068dce8d837577262e4387e 188 Gene3D G3DSA:3.90.20.20 3 120 1.2E-24 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 TVD_11640 92c0e339a068dce8d837577262e4387e 188 Gene3D G3DSA:2.30.22.10 121 177 1.0E-24 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 TVD_11640 92c0e339a068dce8d837577262e4387e 188 SUPERFAMILY SSF58014 29 121 3.01E-23 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 TVD_11640 92c0e339a068dce8d837577262e4387e 188 Pfam PF01025 GrpE 12 177 1.7E-50 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TVD_11640 92c0e339a068dce8d837577262e4387e 188 PRINTS PR00773 GrpE protein signature 47 63 3.8E-24 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TVD_11640 92c0e339a068dce8d837577262e4387e 188 PRINTS PR00773 GrpE protein signature 129 144 3.8E-24 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TVD_11640 92c0e339a068dce8d837577262e4387e 188 PRINTS PR00773 GrpE protein signature 156 175 3.8E-24 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TVD_11640 92c0e339a068dce8d837577262e4387e 188 PRINTS PR00773 GrpE protein signature 75 90 3.8E-24 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 TVD_04155 a9b9c7ee61da5989e739824cef1f5cc4 164 Gene3D G3DSA:3.40.430.10 5 164 7.2E-58 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 TVD_04155 a9b9c7ee61da5989e739824cef1f5cc4 164 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 17 39 - T 11-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 TVD_04155 a9b9c7ee61da5989e739824cef1f5cc4 164 Pfam PF00186 Dihydrofolate reductase 6 162 6.4E-58 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 TVD_04155 a9b9c7ee61da5989e739824cef1f5cc4 164 PRINTS PR00070 Dihydrofolate reductase signature 31 39 3.3E-14 T 11-10-2018 TVD_04155 a9b9c7ee61da5989e739824cef1f5cc4 164 PRINTS PR00070 Dihydrofolate reductase signature 44 55 3.3E-14 T 11-10-2018 TVD_04155 a9b9c7ee61da5989e739824cef1f5cc4 164 PRINTS PR00070 Dihydrofolate reductase signature 17 27 3.3E-14 T 11-10-2018 TVD_04155 a9b9c7ee61da5989e739824cef1f5cc4 164 PRINTS PR00070 Dihydrofolate reductase signature 94 108 3.3E-14 T 11-10-2018 TVD_04155 a9b9c7ee61da5989e739824cef1f5cc4 164 SUPERFAMILY SSF53597 5 163 3.62E-56 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 TVD_04155 a9b9c7ee61da5989e739824cef1f5cc4 164 PIRSF PIRSF000194 1 164 1.3E-61 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 TVD_12675 cce54bb69d4a28d85215eae13095ef71 173 Gene3D G3DSA:3.40.50.2020 1 170 7.3E-42 T 11-10-2018 TVD_12675 cce54bb69d4a28d85215eae13095ef71 173 Pfam PF00156 Phosphoribosyl transferase domain 9 135 1.1E-18 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TVD_12675 cce54bb69d4a28d85215eae13095ef71 173 SUPERFAMILY SSF53271 5 151 5.38E-35 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TVD_10805 e4c094072e4525e14ded820b412b1e77 196 Gene3D G3DSA:2.40.100.10 29 194 7.3E-67 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily TVD_10805 e4c094072e4525e14ded820b412b1e77 196 SUPERFAMILY SSF50891 29 193 1.75E-58 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily TVD_10805 e4c094072e4525e14ded820b412b1e77 196 PIRSF PIRSF001467 17 195 1.4E-28 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 TVD_10805 e4c094072e4525e14ded820b412b1e77 196 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 33 192 1.9E-49 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TVD_10805 e4c094072e4525e14ded820b412b1e77 196 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 67 84 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 TVD_10805 e4c094072e4525e14ded820b412b1e77 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 149 164 6.0E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TVD_10805 e4c094072e4525e14ded820b412b1e77 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 46 61 6.0E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TVD_10805 e4c094072e4525e14ded820b412b1e77 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 72 84 6.0E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 209 3.2E-66 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 SUPERFAMILY SSF51735 1 114 4.73E-24 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 Gene3D G3DSA:3.30.160.110 115 150 6.2E-16 T 11-10-2018 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 Gene3D G3DSA:3.40.50.720 1 114 2.7E-29 T 11-10-2018 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 Gene3D G3DSA:1.10.8.210 152 213 1.6E-12 T 11-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 SUPERFAMILY SSF53790 216 461 1.83E-82 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 PIRSF PIRSF036426 1 468 3.1E-188 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 SUPERFAMILY SSF75615 116 210 7.06E-26 T 11-10-2018 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 Gene3D G3DSA:3.40.1010.10 217 333 6.1E-45 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 Gene3D G3DSA:3.30.950.10 334 472 6.3E-49 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 Pfam PF10414 Sirohaem synthase dimerisation region 152 209 2.3E-20 T 11-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 Hamap MF_01646 Siroheme synthase [cysG]. 1 462 49.949 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 Pfam PF13241 Putative NAD(P)-binding 6 117 2.4E-27 T 11-10-2018 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 298 331 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 218 453 1.9E-92 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 Pfam PF14824 Sirohaem biosynthesis protein central 121 147 9.9E-7 T 11-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TVD_03435 da6c59f0c74ccb67b89f2385348a7b76 484 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 220 430 9.1E-54 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TVD_13240 a7bd251aa8e881384687bd106e675f14 370 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 339 350 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_13240 a7bd251aa8e881384687bd106e675f14 370 Pfam PF17179 4Fe-4S dicluster domain 259 353 5.6E-33 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TVD_13240 a7bd251aa8e881384687bd106e675f14 370 SUPERFAMILY SSF46548 242 364 3.31E-15 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_05075 9203d58a3a11ef5c18b91b0d0c413fef 388 PIRSF PIRSF500134 1 387 2.3E-123 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 TVD_05075 9203d58a3a11ef5c18b91b0d0c413fef 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 5.3E-103 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TVD_05075 9203d58a3a11ef5c18b91b0d0c413fef 388 SMART SM00984 300 387 4.5E-12 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TVD_05075 9203d58a3a11ef5c18b91b0d0c413fef 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 378 1.1E-7 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TVD_05075 9203d58a3a11ef5c18b91b0d0c413fef 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 170 1.4E-34 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TVD_05075 9203d58a3a11ef5c18b91b0d0c413fef 388 SUPERFAMILY SSF48179 191 287 1.7E-30 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TVD_05075 9203d58a3a11ef5c18b91b0d0c413fef 388 Gene3D G3DSA:1.20.5.100 194 221 1.1E-19 T 11-10-2018 TVD_05075 9203d58a3a11ef5c18b91b0d0c413fef 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 2.2E-27 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TVD_05075 9203d58a3a11ef5c18b91b0d0c413fef 388 PIRSF PIRSF000124 1 388 3.3E-138 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TVD_05075 9203d58a3a11ef5c18b91b0d0c413fef 388 Gene3D G3DSA:3.40.50.720 222 388 5.0E-64 T 11-10-2018 TVD_05075 9203d58a3a11ef5c18b91b0d0c413fef 388 SUPERFAMILY SSF51735 1 194 1.92E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_05075 9203d58a3a11ef5c18b91b0d0c413fef 388 SUPERFAMILY SSF52413 283 388 2.88E-26 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 TVD_05075 9203d58a3a11ef5c18b91b0d0c413fef 388 Gene3D G3DSA:3.40.50.720 1 193 2.3E-61 T 11-10-2018 TVD_01840 44132f024d296ed8b73bc86b060c16d2 136 Pfam PF13474 SnoaL-like domain 12 122 8.4E-15 T 11-10-2018 IPR037401 SnoaL-like domain TVD_01840 44132f024d296ed8b73bc86b060c16d2 136 Gene3D G3DSA:3.10.450.50 1 130 1.9E-35 T 11-10-2018 TVD_01840 44132f024d296ed8b73bc86b060c16d2 136 SUPERFAMILY SSF54427 2 123 2.48E-29 T 11-10-2018 IPR032710 NTF2-like domain superfamily TVD_06440 a5e1aa3d40db50f9e72da22a1c9b69c3 298 Gene3D G3DSA:3.60.110.10 2 295 1.8E-96 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TVD_06440 a5e1aa3d40db50f9e72da22a1c9b69c3 298 Pfam PF00795 Carbon-nitrogen hydrolase 8 274 1.9E-59 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TVD_06440 a5e1aa3d40db50f9e72da22a1c9b69c3 298 SUPERFAMILY SSF56317 6 292 1.02E-84 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TVD_03830 e94bfcb0604bcf2acff081c4a50c3680 166 SUPERFAMILY SSF75169 39 163 2.02E-15 T 11-10-2018 IPR027396 DsrEFH-like TVD_03830 e94bfcb0604bcf2acff081c4a50c3680 166 Pfam PF02635 DsrE/DsrF-like family 63 163 1.0E-10 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_03830 e94bfcb0604bcf2acff081c4a50c3680 166 Gene3D G3DSA:3.40.1260.10 37 164 3.3E-12 T 11-10-2018 IPR027396 DsrEFH-like TVD_12655 610b9fbc24af0f5ea179df45b0d03afa 182 PIRSF PIRSF027391 9 180 7.8E-30 T 11-10-2018 IPR014535 Predicted heptaprenyl diphosphate synthase, component I TVD_12655 610b9fbc24af0f5ea179df45b0d03afa 182 Pfam PF07456 Heptaprenyl diphosphate synthase component I 19 164 2.6E-38 T 11-10-2018 IPR010898 Heptaprenyl diphosphate synthase component I TVD_12655 610b9fbc24af0f5ea179df45b0d03afa 182 Gene3D G3DSA:1.10.1760.20 14 136 1.7E-5 T 11-10-2018 TVD_10865 a12e8f239c0681f11228d0204f1acb6a 134 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.856 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 TVD_10865 a12e8f239c0681f11228d0204f1acb6a 134 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 2.4E-33 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10865 a12e8f239c0681f11228d0204f1acb6a 134 SUPERFAMILY SSF54995 1 102 5.62E-36 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10865 a12e8f239c0681f11228d0204f1acb6a 134 Pfam PF01250 Ribosomal protein S6 3 91 2.4E-26 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10865 a12e8f239c0681f11228d0204f1acb6a 134 Gene3D G3DSA:3.30.70.60 1 92 1.1E-31 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 TVD_06240 68aa44c0463a7db3186ba105cde6534f 452 SUPERFAMILY SSF52540 123 353 1.45E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06240 68aa44c0463a7db3186ba105cde6534f 452 SUPERFAMILY SSF52172 1 167 3.49E-7 T 11-10-2018 IPR011006 CheY-like superfamily TVD_06240 68aa44c0463a7db3186ba105cde6534f 452 Gene3D G3DSA:1.10.10.60 384 444 1.9E-12 T 11-10-2018 TVD_06240 68aa44c0463a7db3186ba105cde6534f 452 SUPERFAMILY SSF46689 333 441 1.03E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_06240 68aa44c0463a7db3186ba105cde6534f 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 424 444 2.7E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_06240 68aa44c0463a7db3186ba105cde6534f 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 407 424 2.7E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_06240 68aa44c0463a7db3186ba105cde6534f 452 Gene3D G3DSA:1.10.8.60 294 367 7.9E-18 T 11-10-2018 TVD_06240 68aa44c0463a7db3186ba105cde6534f 452 Pfam PF02954 Bacterial regulatory protein, Fis family 403 440 2.6E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_06240 68aa44c0463a7db3186ba105cde6534f 452 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 333 342 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TVD_06240 68aa44c0463a7db3186ba105cde6534f 452 Pfam PF00158 Sigma-54 interaction domain 124 289 6.2E-62 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TVD_06240 68aa44c0463a7db3186ba105cde6534f 452 Gene3D G3DSA:3.40.50.300 116 293 3.1E-59 T 11-10-2018 TVD_06240 68aa44c0463a7db3186ba105cde6534f 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 209 224 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TVD_06240 68aa44c0463a7db3186ba105cde6534f 452 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 147 160 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TVD_06240 68aa44c0463a7db3186ba105cde6534f 452 SMART SM00382 143 287 5.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_04120 5959848a30dcd6b75db219bb62b3482c 502 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 7 487 55.843 T 11-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 TVD_04120 5959848a30dcd6b75db219bb62b3482c 502 Pfam PF02347 Glycine cleavage system P-protein 28 395 2.1E-13 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 TVD_04120 5959848a30dcd6b75db219bb62b3482c 502 Gene3D G3DSA:3.90.1150.10 342 472 2.9E-39 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_04120 5959848a30dcd6b75db219bb62b3482c 502 SUPERFAMILY SSF53383 25 483 3.56E-111 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_04120 5959848a30dcd6b75db219bb62b3482c 502 Gene3D G3DSA:3.40.640.10 82 341 2.5E-60 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_00665 08b9b81626d53ae5a3551769e4348b4e 671 SMART SM00283 409 670 1.3E-74 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_00665 08b9b81626d53ae5a3551769e4348b4e 671 SMART SM00304 340 394 8.5E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_00665 08b9b81626d53ae5a3551769e4348b4e 671 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 166 5.1E-7 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain TVD_00665 08b9b81626d53ae5a3551769e4348b4e 671 Gene3D G3DSA:1.10.287.950 341 671 4.9E-71 T 11-10-2018 TVD_00665 08b9b81626d53ae5a3551769e4348b4e 671 SUPERFAMILY SSF58104 362 671 1.57E-75 T 11-10-2018 TVD_00665 08b9b81626d53ae5a3551769e4348b4e 671 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 483 636 1.8E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_10110 9d84dc269ea28860deb4f861251cd964 118 Gene3D G3DSA:3.40.30.10 2 118 2.4E-50 T 11-10-2018 TVD_10110 9d84dc269ea28860deb4f861251cd964 118 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 6 117 6.0E-48 T 11-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 TVD_10110 9d84dc269ea28860deb4f861251cd964 118 Pfam PF03960 ArsC family 8 116 1.3E-19 T 11-10-2018 IPR006660 Arsenate reductase-like TVD_10110 9d84dc269ea28860deb4f861251cd964 118 SUPERFAMILY SSF52833 6 117 3.99E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_01960 d65d347b1bf5d49cd76df5d3dace1858 216 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 188 1.9E-57 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 TVD_01960 d65d347b1bf5d49cd76df5d3dace1858 216 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 6 212 55.197 T 11-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 TVD_01960 d65d347b1bf5d49cd76df5d3dace1858 216 SUPERFAMILY SSF53850 6 212 7.38E-65 T 11-10-2018 TVD_01960 d65d347b1bf5d49cd76df5d3dace1858 216 Pfam PF01634 ATP phosphoribosyltransferase 56 208 1.3E-48 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 TVD_01960 d65d347b1bf5d49cd76df5d3dace1858 216 Gene3D G3DSA:3.40.190.10 98 180 5.5E-71 T 11-10-2018 TVD_01960 d65d347b1bf5d49cd76df5d3dace1858 216 Gene3D G3DSA:3.40.190.10 8 203 5.5E-71 T 11-10-2018 TVD_01960 d65d347b1bf5d49cd76df5d3dace1858 216 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 147 168 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 TVD_07540 263e17ffafdf8a7b0200e97ad2b88a94 696 Pfam PF00593 TonB dependent receptor 203 693 3.9E-40 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel TVD_07540 263e17ffafdf8a7b0200e97ad2b88a94 696 Gene3D G3DSA:2.170.130.10 31 155 4.2E-35 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily TVD_07540 263e17ffafdf8a7b0200e97ad2b88a94 696 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 150 6.0E-26 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain TVD_07540 263e17ffafdf8a7b0200e97ad2b88a94 696 SUPERFAMILY SSF56935 21 696 1.95E-105 T 11-10-2018 TVD_07540 263e17ffafdf8a7b0200e97ad2b88a94 696 Gene3D G3DSA:2.40.170.20 163 696 2.0E-75 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily TVD_03305 679ef655cf3ac55abbf9eb7c65320765 193 SUPERFAMILY SSF54975 5 139 4.58E-33 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TVD_03305 679ef655cf3ac55abbf9eb7c65320765 193 Pfam PF04940 Sensors of blue-light using FAD 5 101 6.5E-26 T 11-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 TVD_03305 679ef655cf3ac55abbf9eb7c65320765 193 SMART SM01034 4 102 2.7E-39 T 11-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 TVD_03305 679ef655cf3ac55abbf9eb7c65320765 193 Gene3D G3DSA:3.30.70.100 1 134 2.6E-34 T 11-10-2018 TVD_05670 edb562d9bea03d4d86dece24bd451a91 190 SUPERFAMILY SSF48452 80 170 1.52E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_05670 edb562d9bea03d4d86dece24bd451a91 190 Gene3D G3DSA:1.25.40.10 65 158 9.6E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_05670 edb562d9bea03d4d86dece24bd451a91 190 Pfam PF14559 Tetratricopeptide repeat 94 139 9.7E-7 T 11-10-2018 TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 Gene3D G3DSA:3.40.50.10860 8 276 3.2E-106 T 11-10-2018 TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 SUPERFAMILY SSF51735 123 279 1.22E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.114 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.5E-83 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.5E-83 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.5E-83 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.5E-83 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.5E-83 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.5E-83 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.5E-83 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 SUPERFAMILY SSF53223 1 122 9.4E-39 T 11-10-2018 TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 278 5.0E-64 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 Gene3D G3DSA:3.40.50.720 6 259 3.2E-106 T 11-10-2018 TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TVD_10795 17e904dcc6d32709bed9e96c4209ef77 287 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 4.4E-38 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 TVD_01620 2e767baf80218b02be7d78b0a488f5da 193 SMART SM00507 83 136 3.2E-8 T 11-10-2018 IPR003615 HNH nuclease TVD_01620 2e767baf80218b02be7d78b0a488f5da 193 Pfam PF14279 HNH endonuclease 96 150 2.7E-15 T 11-10-2018 IPR029471 HNH endonuclease 5 TVD_01620 2e767baf80218b02be7d78b0a488f5da 193 Gene3D G3DSA:3.30.40.60 66 167 1.9E-21 T 11-10-2018 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 Pfam PF05192 MutS domain III 266 557 4.8E-36 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 Pfam PF01624 MutS domain I 1 109 6.1E-38 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 Pfam PF05190 MutS family domain IV 426 516 3.4E-29 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 854 23.774 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 SUPERFAMILY SSF48334 264 563 1.57E-82 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily TVD_09225 b0addd87698614b6cddb30db7355dabe 865 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 859 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 Gene3D G3DSA:3.40.50.300 568 860 2.6E-100 T 11-10-2018 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 SMART SM00533 280 589 2.2E-91 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 SUPERFAMILY SSF52540 565 797 6.89E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_09225 b0addd87698614b6cddb30db7355dabe 865 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 SUPERFAMILY SSF53150 107 277 6.15E-33 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 Pfam PF00488 MutS domain V 609 796 5.9E-84 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 Gene3D G3DSA:3.30.420.110 128 256 1.3E-27 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 Gene3D G3DSA:1.10.1420.10 385 501 3.2E-95 T 11-10-2018 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 Gene3D G3DSA:3.40.1170.10 1 111 5.7E-45 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 SMART SM00534 606 793 1.5E-111 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 PIRSF PIRSF037677 1 182 9.3E-24 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 PIRSF PIRSF037677 221 815 7.9E-125 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 SUPERFAMILY SSF55271 1 105 1.12E-37 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 Pfam PF05188 MutS domain II 131 249 4.7E-21 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 TVD_09225 b0addd87698614b6cddb30db7355dabe 865 Gene3D G3DSA:1.10.1420.10 263 557 3.2E-95 T 11-10-2018 TVD_01690 e822edd5542016b654de0ed98d1b022e 518 Gene3D G3DSA:3.30.450.90 111 243 5.8E-52 T 11-10-2018 TVD_01690 e822edd5542016b654de0ed98d1b022e 518 SUPERFAMILY SSF52540 128 515 2.17E-101 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01690 e822edd5542016b654de0ed98d1b022e 518 Gene3D G3DSA:3.30.300.160 30 110 2.4E-5 T 11-10-2018 TVD_01690 e822edd5542016b654de0ed98d1b022e 518 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 34 515 6.9E-211 T 11-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 TVD_01690 e822edd5542016b654de0ed98d1b022e 518 SMART SM00382 271 397 1.3E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_01690 e822edd5542016b654de0ed98d1b022e 518 Gene3D G3DSA:3.40.50.300 244 518 5.1E-118 T 11-10-2018 TVD_01690 e822edd5542016b654de0ed98d1b022e 518 Pfam PF00437 Type II/IV secretion system protein 145 410 2.4E-87 T 11-10-2018 IPR001482 Type II/IV secretion system protein TVD_01690 e822edd5542016b654de0ed98d1b022e 518 SUPERFAMILY SSF160246 34 97 3.4E-10 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily TVD_01690 e822edd5542016b654de0ed98d1b022e 518 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 338 352 - T 11-10-2018 IPR001482 Type II/IV secretion system protein TVD_10115 4ea207f70b085eb4ddb28701085e8c16 203 SUPERFAMILY SSF52218 5 197 5.9E-55 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TVD_10115 4ea207f70b085eb4ddb28701085e8c16 203 Gene3D G3DSA:3.40.50.360 2 198 5.5E-63 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TVD_10115 4ea207f70b085eb4ddb28701085e8c16 203 ProSitePatterns PS00201 Flavodoxin signature. 9 25 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 TVD_10115 4ea207f70b085eb4ddb28701085e8c16 203 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 7 197 8.0E-45 T 11-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 TVD_10115 4ea207f70b085eb4ddb28701085e8c16 203 Pfam PF03358 NADPH-dependent FMN reductase 16 131 1.9E-7 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 307 319 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 216 329 4.2E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 15 62 2.1E-13 T 11-10-2018 IPR004176 Clp, N-terminal TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 523 541 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 Gene3D G3DSA:3.40.50.300 171 360 7.3E-67 T 11-10-2018 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 Pfam PF07724 AAA domain (Cdc48 subfamily) 491 651 3.3E-50 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 567 585 2.7E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 538 556 2.7E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 600 614 2.7E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 496 514 2.7E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 SUPERFAMILY SSF81923 1 141 2.35E-57 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 SMART SM01086 658 747 2.8E-33 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 SMART SM00382 211 357 4.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 SMART SM00382 492 659 1.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 739 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 Gene3D G3DSA:1.10.1780.10 1 142 1.1E-39 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 SUPERFAMILY SSF52540 442 739 7.99E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 Gene3D G3DSA:1.10.8.60 658 754 1.1E-27 T 11-10-2018 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 658 738 2.3E-23 T 11-10-2018 IPR019489 Clp ATPase, C-terminal TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 Gene3D G3DSA:3.40.50.300 444 656 7.1E-79 T 11-10-2018 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 Gene3D G3DSA:1.10.8.60 361 443 8.9E-34 T 11-10-2018 TVD_06745 bc063c73e6b5a28ba1c630c022233b7f 756 SUPERFAMILY SSF52540 173 433 9.5E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01445 11dffaf52a45f7b5f022ce6008237812 174 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.1E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01445 11dffaf52a45f7b5f022ce6008237812 174 SUPERFAMILY SSF54523 7 113 1.41E-17 T 11-10-2018 TVD_01445 11dffaf52a45f7b5f022ce6008237812 174 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01445 11dffaf52a45f7b5f022ce6008237812 174 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 2.5E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01445 11dffaf52a45f7b5f022ce6008237812 174 Pfam PF12019 Type II transport protein GspH 43 164 4.6E-22 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 TVD_01445 11dffaf52a45f7b5f022ce6008237812 174 Gene3D G3DSA:3.30.700.10 7 174 6.6E-11 T 11-10-2018 TVD_12870 768d16d82307f374bfcb7dfebf38dc8c 205 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 185 2.6E-52 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 TVD_12870 768d16d82307f374bfcb7dfebf38dc8c 205 SMART SM01207 8 186 2.7E-84 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 TVD_12870 768d16d82307f374bfcb7dfebf38dc8c 205 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 4 196 1.3E-58 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 TVD_12870 768d16d82307f374bfcb7dfebf38dc8c 205 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 194 20.365 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 TVD_05455 9fd2b6147a20f7c7129a0acdd9ebdf0c 411 SUPERFAMILY SSF103473 29 408 3.66E-21 T 11-10-2018 IPR036259 MFS transporter superfamily TVD_05455 9fd2b6147a20f7c7129a0acdd9ebdf0c 411 Gene3D G3DSA:1.20.1250.20 218 410 5.3E-6 T 11-10-2018 TVD_05455 9fd2b6147a20f7c7129a0acdd9ebdf0c 411 Gene3D G3DSA:1.20.1250.20 22 205 1.2E-8 T 11-10-2018 TVD_05455 9fd2b6147a20f7c7129a0acdd9ebdf0c 411 Pfam PF07690 Major Facilitator Superfamily 38 334 4.6E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TVD_04840 d5a192bc0673f9d17405f053653bc9b0 629 SUPERFAMILY SSF52833 33 168 1.3E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_04840 d5a192bc0673f9d17405f053653bc9b0 629 PIRSF PIRSF006402 22 584 2.0E-106 T 11-10-2018 IPR024705 Spermatogenesis-associated protein 20 TVD_04840 d5a192bc0673f9d17405f053653bc9b0 629 Pfam PF03190 Protein of unknown function, DUF255 33 186 4.7E-42 T 11-10-2018 IPR004879 Domain of unknown function DUF255 TVD_04840 d5a192bc0673f9d17405f053653bc9b0 629 SUPERFAMILY SSF48208 212 551 6.38E-22 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TVD_04840 d5a192bc0673f9d17405f053653bc9b0 629 Gene3D G3DSA:3.40.30.10 30 193 1.1E-39 T 11-10-2018 TVD_10410 1746ffe001533e878099df73127ef79c 139 SUPERFAMILY SSF54637 4 132 2.85E-38 T 11-10-2018 IPR029069 HotDog domain superfamily TVD_10410 1746ffe001533e878099df73127ef79c 139 Gene3D G3DSA:3.10.129.10 1 135 8.3E-40 T 11-10-2018 TVD_10410 1746ffe001533e878099df73127ef79c 139 PIRSF PIRSF003230 1 138 4.4E-44 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TVD_10410 1746ffe001533e878099df73127ef79c 139 Pfam PF03061 Thioesterase superfamily 19 103 5.5E-17 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 TVD_10410 1746ffe001533e878099df73127ef79c 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 5 129 7.5E-50 T 11-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 TVD_10410 1746ffe001533e878099df73127ef79c 139 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 10 27 - T 11-10-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 TVD_10410 1746ffe001533e878099df73127ef79c 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 8 124 3.1E-36 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TVD_11840 39ea27b27ba247be7dd327c4817d8d23 633 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 10 615 3.3E-260 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TVD_11840 39ea27b27ba247be7dd327c4817d8d23 633 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 7 278 7.6E-120 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TVD_11840 39ea27b27ba247be7dd327c4817d8d23 633 Pfam PF02779 Transketolase, pyrimidine binding domain 313 473 1.7E-37 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TVD_11840 39ea27b27ba247be7dd327c4817d8d23 633 SMART SM00861 314 478 1.3E-60 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain TVD_11840 39ea27b27ba247be7dd327c4817d8d23 633 SUPERFAMILY SSF52518 3 376 7.61E-79 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TVD_11840 39ea27b27ba247be7dd327c4817d8d23 633 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 6 618 45.671 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TVD_11840 39ea27b27ba247be7dd327c4817d8d23 633 Gene3D G3DSA:3.40.50.970 312 488 1.5E-63 T 11-10-2018 TVD_11840 39ea27b27ba247be7dd327c4817d8d23 633 Gene3D G3DSA:3.40.50.920 493 619 6.1E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TVD_11840 39ea27b27ba247be7dd327c4817d8d23 633 SUPERFAMILY SSF52922 489 617 3.4E-30 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TVD_11840 39ea27b27ba247be7dd327c4817d8d23 633 ProSitePatterns PS00801 Transketolase signature 1. 32 51 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TVD_11840 39ea27b27ba247be7dd327c4817d8d23 633 SUPERFAMILY SSF52518 312 502 1.32E-56 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TVD_11840 39ea27b27ba247be7dd327c4817d8d23 633 Pfam PF02780 Transketolase, C-terminal domain 493 609 1.5E-25 T 11-10-2018 IPR033248 Transketolase, C-terminal domain TVD_00935 e55db7e7cd9471c778039e28641daf78 332 SUPERFAMILY SSF51735 118 288 5.64E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_00935 e55db7e7cd9471c778039e28641daf78 332 Gene3D G3DSA:3.90.180.10 13 324 5.9E-85 T 11-10-2018 TVD_00935 e55db7e7cd9471c778039e28641daf78 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 1.4E-7 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TVD_00935 e55db7e7cd9471c778039e28641daf78 332 SMART SM00829 10 328 1.4E-32 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TVD_00935 e55db7e7cd9471c778039e28641daf78 332 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 146 167 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 TVD_00935 e55db7e7cd9471c778039e28641daf78 332 Pfam PF13602 Zinc-binding dehydrogenase 192 328 5.9E-24 T 11-10-2018 TVD_00935 e55db7e7cd9471c778039e28641daf78 332 SUPERFAMILY SSF50129 1 150 1.48E-35 T 11-10-2018 IPR011032 GroES-like superfamily TVD_00935 e55db7e7cd9471c778039e28641daf78 332 Gene3D G3DSA:3.40.50.720 129 274 5.9E-85 T 11-10-2018 TVD_02790 4fc28b3e0dc0a92e92fc5ec253da5ae2 273 SMART SM00235 50 225 4.4E-4 T 11-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 TVD_02790 4fc28b3e0dc0a92e92fc5ec253da5ae2 273 Gene3D G3DSA:3.40.390.10 21 226 1.1E-24 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 TVD_02790 4fc28b3e0dc0a92e92fc5ec253da5ae2 273 SUPERFAMILY SSF55486 76 226 2.84E-19 T 11-10-2018 TVD_02790 4fc28b3e0dc0a92e92fc5ec253da5ae2 273 Pfam PF00413 Matrixin 74 224 6.2E-15 T 11-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 TVD_02790 4fc28b3e0dc0a92e92fc5ec253da5ae2 273 PRINTS PR00138 Matrixin signature 179 204 1.7E-10 T 11-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 TVD_02790 4fc28b3e0dc0a92e92fc5ec253da5ae2 273 PRINTS PR00138 Matrixin signature 211 224 1.7E-10 T 11-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 TVD_02790 4fc28b3e0dc0a92e92fc5ec253da5ae2 273 PRINTS PR00138 Matrixin signature 83 98 1.7E-10 T 11-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 TVD_05345 962d46b7576c8df75825c614c0b6be4b 706 Pfam PF01740 STAS domain 572 670 4.2E-12 T 11-10-2018 IPR002645 STAS domain TVD_05345 962d46b7576c8df75825c614c0b6be4b 706 Pfam PF00916 Sulfate permease family 24 237 7.4E-47 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 TVD_05345 962d46b7576c8df75825c614c0b6be4b 706 Pfam PF00916 Sulfate permease family 351 508 1.0E-47 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 TVD_05345 962d46b7576c8df75825c614c0b6be4b 706 SUPERFAMILY SSF52091 572 678 1.81E-12 T 11-10-2018 IPR036513 STAS domain superfamily TVD_05345 962d46b7576c8df75825c614c0b6be4b 706 Gene3D G3DSA:3.30.750.24 564 682 3.5E-20 T 11-10-2018 IPR036513 STAS domain superfamily TVD_02765 00fa179e5f5c00171bc14b0838c5cc38 703 SUPERFAMILY SSF53706 3 581 2.22E-135 T 11-10-2018 TVD_02765 00fa179e5f5c00171bc14b0838c5cc38 703 Pfam PF01568 Molydopterin dinucleotide binding domain 579 683 2.2E-31 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 TVD_02765 00fa179e5f5c00171bc14b0838c5cc38 703 Gene3D G3DSA:2.40.40.20 551 691 8.2E-47 T 11-10-2018 TVD_02765 00fa179e5f5c00171bc14b0838c5cc38 703 SUPERFAMILY SSF50692 533 690 5.65E-43 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily TVD_02765 00fa179e5f5c00171bc14b0838c5cc38 703 Pfam PF00384 Molybdopterin oxidoreductase 50 317 3.4E-45 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_02765 00fa179e5f5c00171bc14b0838c5cc38 703 Pfam PF00384 Molybdopterin oxidoreductase 384 467 8.8E-13 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_02765 00fa179e5f5c00171bc14b0838c5cc38 703 Gene3D G3DSA:3.40.228.10 134 324 1.0E-121 T 11-10-2018 TVD_02765 00fa179e5f5c00171bc14b0838c5cc38 703 Gene3D G3DSA:3.40.50.740 50 488 1.0E-121 T 11-10-2018 TVD_02765 00fa179e5f5c00171bc14b0838c5cc38 703 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 617 644 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 TVD_13650 a7a23f20bbdc5c3a816f9bb19f0da647 245 Gene3D G3DSA:3.30.450.40 61 237 9.6E-44 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_13650 a7a23f20bbdc5c3a816f9bb19f0da647 245 SUPERFAMILY SSF55781 95 218 4.36E-11 T 11-10-2018 TVD_13650 a7a23f20bbdc5c3a816f9bb19f0da647 245 Pfam PF04340 Protein of unknown function, DUF484 26 234 5.1E-46 T 11-10-2018 IPR007435 Protein of unknown function DUF484 TVD_02110 1a7da35e5c06087cb8b9e670fb96e239 142 Gene3D G3DSA:2.30.30.220 1 118 9.2E-46 T 11-10-2018 IPR036760 SspB-like superfamily TVD_02110 1a7da35e5c06087cb8b9e670fb96e239 142 SUPERFAMILY SSF101738 2 107 6.54E-44 T 11-10-2018 IPR036760 SspB-like superfamily TVD_02110 1a7da35e5c06087cb8b9e670fb96e239 142 Pfam PF04386 Stringent starvation protein B 4 142 2.5E-32 T 11-10-2018 IPR007481 Stringent starvation protein B TVD_02110 1a7da35e5c06087cb8b9e670fb96e239 142 PIRSF PIRSF005276 1 142 5.0E-49 T 11-10-2018 IPR007481 Stringent starvation protein B TVD_03570 3a60252df029a5165f797d27a8802ff2 255 Gene3D G3DSA:3.20.20.70 1 254 1.2E-96 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_03570 3a60252df029a5165f797d27a8802ff2 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_03570 3a60252df029a5165f797d27a8802ff2 255 SUPERFAMILY SSF51351 1 249 1.44E-90 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_03570 3a60252df029a5165f797d27a8802ff2 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 3.2E-66 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_03570 3a60252df029a5165f797d27a8802ff2 255 Pfam PF00121 Triosephosphate isomerase 5 245 2.2E-85 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_03570 3a60252df029a5165f797d27a8802ff2 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 58.471 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_04655 6b0721b3de2ed6233421366c5ecfa489 243 Gene3D G3DSA:2.60.120.10 32 153 2.8E-39 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TVD_04655 6b0721b3de2ed6233421366c5ecfa489 243 SUPERFAMILY SSF46785 155 233 4.09E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_04655 6b0721b3de2ed6233421366c5ecfa489 243 SMART SM00100 19 140 4.8E-12 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TVD_04655 6b0721b3de2ed6233421366c5ecfa489 243 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 198 3.0E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TVD_04655 6b0721b3de2ed6233421366c5ecfa489 243 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 198 213 3.0E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TVD_04655 6b0721b3de2ed6233421366c5ecfa489 243 Gene3D G3DSA:1.10.10.10 154 234 7.6E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_04655 6b0721b3de2ed6233421366c5ecfa489 243 SMART SM00419 176 224 3.7E-12 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TVD_04655 6b0721b3de2ed6233421366c5ecfa489 243 Pfam PF00027 Cyclic nucleotide-binding domain 39 121 4.6E-12 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TVD_04655 6b0721b3de2ed6233421366c5ecfa489 243 SUPERFAMILY SSF51206 12 150 1.24E-27 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like TVD_04655 6b0721b3de2ed6233421366c5ecfa489 243 Pfam PF13545 Crp-like helix-turn-helix domain 157 230 2.3E-19 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TVD_12515 dc2012953420b949bc50531a4e99d6d6 227 SUPERFAMILY SSF56784 4 222 1.15E-58 T 11-10-2018 IPR036412 HAD-like superfamily TVD_12515 dc2012953420b949bc50531a4e99d6d6 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 191 5.7E-35 T 11-10-2018 TVD_12515 dc2012953420b949bc50531a4e99d6d6 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 193 6.0E-14 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_12515 dc2012953420b949bc50531a4e99d6d6 227 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 187 6.7E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_12515 dc2012953420b949bc50531a4e99d6d6 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 8.8E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_12515 dc2012953420b949bc50531a4e99d6d6 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 8.8E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_12515 dc2012953420b949bc50531a4e99d6d6 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 182 195 8.8E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_12515 dc2012953420b949bc50531a4e99d6d6 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 8.8E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_12515 dc2012953420b949bc50531a4e99d6d6 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 8.8E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_12515 dc2012953420b949bc50531a4e99d6d6 227 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 222 1.1E-69 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 TVD_12515 dc2012953420b949bc50531a4e99d6d6 227 Gene3D G3DSA:3.40.50.1000 9 214 1.7E-62 T 11-10-2018 IPR023214 HAD superfamily TVD_12515 dc2012953420b949bc50531a4e99d6d6 227 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 223 38.412 T 11-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 TVD_12515 dc2012953420b949bc50531a4e99d6d6 227 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 87 191 2.3E-12 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 TVD_12515 dc2012953420b949bc50531a4e99d6d6 227 Gene3D G3DSA:1.10.150.240 21 92 1.7E-62 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TVD_12520 54e32c4e5ca2e5e1221b5756813f063f 229 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TVD_12520 54e32c4e5ca2e5e1221b5756813f063f 229 PIRSF PIRSF001461 1 229 2.6E-100 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TVD_12520 54e32c4e5ca2e5e1221b5756813f063f 229 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 7 207 2.1E-95 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TVD_12520 54e32c4e5ca2e5e1221b5756813f063f 229 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 137 159 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TVD_12520 54e32c4e5ca2e5e1221b5756813f063f 229 Gene3D G3DSA:3.20.20.70 2 219 4.7E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_12520 54e32c4e5ca2e5e1221b5756813f063f 229 SUPERFAMILY SSF51366 6 208 3.53E-73 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TVD_12520 54e32c4e5ca2e5e1221b5756813f063f 229 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 204 5.6E-92 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 TVD_09995 0ef9435426b40fdf00ef81e32abe1508 100 Pfam PF05164 Cell division protein ZapA 7 92 5.3E-23 T 11-10-2018 IPR007838 Cell division protein ZapA-like TVD_09995 0ef9435426b40fdf00ef81e32abe1508 100 SUPERFAMILY SSF102829 7 75 5.23E-21 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily TVD_09995 0ef9435426b40fdf00ef81e32abe1508 100 Gene3D G3DSA:1.20.5.50 49 100 4.6E-12 T 11-10-2018 TVD_09995 0ef9435426b40fdf00ef81e32abe1508 100 Gene3D G3DSA:1.10.20.30 1 48 5.0E-21 T 11-10-2018 TVD_12175 5039d8664fd5050720f65d72890a193d 382 SMART SM00341 210 290 2.7E-4 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TVD_12175 5039d8664fd5050720f65d72890a193d 382 Gene3D G3DSA:1.10.150.80 195 294 6.1E-24 T 11-10-2018 TVD_12175 5039d8664fd5050720f65d72890a193d 382 Pfam PF00570 HRDC domain 214 269 5.0E-11 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TVD_12175 5039d8664fd5050720f65d72890a193d 382 Pfam PF01612 3'-5' exonuclease 7 171 6.0E-37 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TVD_12175 5039d8664fd5050720f65d72890a193d 382 Gene3D G3DSA:3.30.420.10 3 189 2.8E-65 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TVD_12175 5039d8664fd5050720f65d72890a193d 382 TIGRFAM TIGR01388 rnd: ribonuclease D 6 359 9.4E-103 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 TVD_12175 5039d8664fd5050720f65d72890a193d 382 SUPERFAMILY SSF47819 192 297 1.44E-25 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 TVD_12175 5039d8664fd5050720f65d72890a193d 382 SMART SM00474 4 171 9.1E-34 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TVD_12175 5039d8664fd5050720f65d72890a193d 382 SUPERFAMILY SSF53098 6 209 5.18E-67 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_12175 5039d8664fd5050720f65d72890a193d 382 Hamap MF_01899 Ribonuclease D [rnd]. 4 366 40.384 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 TVD_06090 4782676872704620cd7c6063caff8c59 207 Gene3D G3DSA:3.30.2010.10 105 197 6.8E-16 T 11-10-2018 TVD_06090 4782676872704620cd7c6063caff8c59 207 Pfam PF01863 Protein of unknown function DUF45 1 197 1.4E-56 T 11-10-2018 IPR002725 Protein of unknown function DUF45 TVD_01770 98631302ba4873b9e63f09a9079e139e 369 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 17 359 2.4E-116 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 TVD_01770 98631302ba4873b9e63f09a9079e139e 369 Gene3D G3DSA:1.20.1090.10 179 368 8.6E-66 T 11-10-2018 TVD_01770 98631302ba4873b9e63f09a9079e139e 369 Pfam PF01761 3-dehydroquinate synthase 73 331 9.7E-109 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 TVD_01770 98631302ba4873b9e63f09a9079e139e 369 PIRSF PIRSF001455 18 366 4.6E-106 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 TVD_01770 98631302ba4873b9e63f09a9079e139e 369 SUPERFAMILY SSF56796 9 362 4.97E-118 T 11-10-2018 TVD_01770 98631302ba4873b9e63f09a9079e139e 369 Gene3D G3DSA:3.40.50.1970 1 178 2.9E-66 T 11-10-2018 TVD_01770 98631302ba4873b9e63f09a9079e139e 369 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 5 362 71.602 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 TVD_03105 f0caeeb07ea66ae47f5763adcb1554f0 174 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 48 135 6.9E-15 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_03105 f0caeeb07ea66ae47f5763adcb1554f0 174 Gene3D G3DSA:1.10.760.10 34 143 1.6E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_03105 f0caeeb07ea66ae47f5763adcb1554f0 174 SUPERFAMILY SSF46626 36 141 1.62E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_13125 0c1c90c4a11362c8cff9eda32fc7f4f2 562 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 5 549 51.603 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 TVD_13125 0c1c90c4a11362c8cff9eda32fc7f4f2 562 SUPERFAMILY SSF56112 96 437 8.92E-49 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily TVD_13125 0c1c90c4a11362c8cff9eda32fc7f4f2 562 Pfam PF03109 ABC1 family 114 231 1.2E-34 T 11-10-2018 IPR004147 UbiB domain TVD_13125 0c1c90c4a11362c8cff9eda32fc7f4f2 562 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 10 446 3.5E-180 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 TVD_07065 9c209a71f7a0980576d52c22f03f67bb 257 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 5 247 2.4E-40 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 TVD_07065 9c209a71f7a0980576d52c22f03f67bb 257 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 257 47.253 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 TVD_07065 9c209a71f7a0980576d52c22f03f67bb 257 Pfam PF02654 Cobalamin-5-phosphate synthase 11 246 2.7E-50 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 TVD_11335 6b124a6bf67d1e76928e3b52b2448ee6 386 Pfam PF00549 CoA-ligase 262 381 3.0E-27 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TVD_11335 6b124a6bf67d1e76928e3b52b2448ee6 386 Gene3D G3DSA:3.30.1490.20 21 104 6.0E-83 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TVD_11335 6b124a6bf67d1e76928e3b52b2448ee6 386 Pfam PF08442 ATP-grasp domain 2 202 7.0E-66 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TVD_11335 6b124a6bf67d1e76928e3b52b2448ee6 386 SUPERFAMILY SSF52210 239 384 2.62E-52 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TVD_11335 6b124a6bf67d1e76928e3b52b2448ee6 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 8.1E-149 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TVD_11335 6b124a6bf67d1e76928e3b52b2448ee6 386 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 40.77 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TVD_11335 6b124a6bf67d1e76928e3b52b2448ee6 386 Gene3D G3DSA:3.30.470.20 1 234 6.0E-83 T 11-10-2018 TVD_11335 6b124a6bf67d1e76928e3b52b2448ee6 386 PIRSF PIRSF001554 1 386 3.3E-143 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 TVD_11335 6b124a6bf67d1e76928e3b52b2448ee6 386 SUPERFAMILY SSF56059 1 237 1.57E-65 T 11-10-2018 TVD_11335 6b124a6bf67d1e76928e3b52b2448ee6 386 Gene3D G3DSA:3.40.50.261 240 386 1.2E-57 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TVD_11335 6b124a6bf67d1e76928e3b52b2448ee6 386 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 TVD_10970 f1d5224cd1f7d5f98851af810ccd27a2 193 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 190 3.2E-93 T 11-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TVD_10970 f1d5224cd1f7d5f98851af810ccd27a2 193 SUPERFAMILY SSF88659 123 186 1.05E-17 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TVD_10970 f1d5224cd1f7d5f98851af810ccd27a2 193 Pfam PF04542 Sigma-70 region 2 25 92 1.9E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TVD_10970 f1d5224cd1f7d5f98851af810ccd27a2 193 SUPERFAMILY SSF88946 2 106 1.0E-30 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TVD_10970 f1d5224cd1f7d5f98851af810ccd27a2 193 Gene3D G3DSA:1.10.1740.10 1 121 1.2E-40 T 11-10-2018 TVD_10970 f1d5224cd1f7d5f98851af810ccd27a2 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 1.0E-31 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TVD_10970 f1d5224cd1f7d5f98851af810ccd27a2 193 Pfam PF08281 Sigma-70, region 4 131 181 7.0E-19 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TVD_10970 f1d5224cd1f7d5f98851af810ccd27a2 193 Gene3D G3DSA:1.10.10.10 123 191 6.9E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_11090 5e97322bd2af2e0f43e0d263f5721c01 267 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 263 52.028 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 TVD_11090 5e97322bd2af2e0f43e0d263f5721c01 267 SUPERFAMILY SSF53335 10 264 7.92E-71 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_11090 5e97322bd2af2e0f43e0d263f5721c01 267 Pfam PF00398 Ribosomal RNA adenine dimethylase 10 234 4.6E-56 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm TVD_11090 5e97322bd2af2e0f43e0d263f5721c01 267 Gene3D G3DSA:3.40.50.150 4 200 4.6E-63 T 11-10-2018 TVD_11090 5e97322bd2af2e0f43e0d263f5721c01 267 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 261 1.8E-76 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 TVD_11090 5e97322bd2af2e0f43e0d263f5721c01 267 Gene3D G3DSA:1.10.8.100 204 265 1.2E-15 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 TVD_11090 5e97322bd2af2e0f43e0d263f5721c01 267 SMART SM00650 24 196 5.1E-79 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 TVD_11090 5e97322bd2af2e0f43e0d263f5721c01 267 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 40 67 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 TVD_07330 b1c3caf4535a730255919fbca1ec8dbb 444 SUPERFAMILY SSF51556 64 363 3.36E-97 T 11-10-2018 IPR032466 Metal-dependent hydrolase TVD_07330 b1c3caf4535a730255919fbca1ec8dbb 444 Gene3D G3DSA:2.30.40.10 14 429 2.4E-163 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TVD_07330 b1c3caf4535a730255919fbca1ec8dbb 444 Gene3D G3DSA:3.20.20.140 65 355 2.4E-163 T 11-10-2018 TVD_07330 b1c3caf4535a730255919fbca1ec8dbb 444 Pfam PF01979 Amidohydrolase family 61 409 1.0E-67 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TVD_07330 b1c3caf4535a730255919fbca1ec8dbb 444 SUPERFAMILY SSF51338 18 435 1.43E-25 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TVD_07330 b1c3caf4535a730255919fbca1ec8dbb 444 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 6 437 40.784 T 11-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 TVD_11760 bb0cecde58d8749407f83708445f20b4 188 Gene3D G3DSA:1.10.10.10 86 186 1.0E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_11760 bb0cecde58d8749407f83708445f20b4 188 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 144 150 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 TVD_11760 bb0cecde58d8749407f83708445f20b4 188 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 98 184 6.2E-25 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 TVD_11760 bb0cecde58d8749407f83708445f20b4 188 SUPERFAMILY SSF46767 96 184 6.67E-22 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 TVD_11760 bb0cecde58d8749407f83708445f20b4 188 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 98 182 4.1E-23 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 TVD_06510 c7fc7690a87cc3e63b20aece96a6518b 434 Gene3D G3DSA:3.65.10.10 14 421 1.1E-154 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TVD_06510 c7fc7690a87cc3e63b20aece96a6518b 434 ProSitePatterns PS00885 EPSP synthase signature 2. 341 359 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TVD_06510 c7fc7690a87cc3e63b20aece96a6518b 434 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 426 2.0E-126 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TVD_06510 c7fc7690a87cc3e63b20aece96a6518b 434 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 430 31.938 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TVD_06510 c7fc7690a87cc3e63b20aece96a6518b 434 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TVD_06510 c7fc7690a87cc3e63b20aece96a6518b 434 Gene3D G3DSA:3.65.10.10 22 231 1.1E-154 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TVD_06510 c7fc7690a87cc3e63b20aece96a6518b 434 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 421 7.7E-116 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 TVD_06510 c7fc7690a87cc3e63b20aece96a6518b 434 PIRSF PIRSF000505 1 434 7.5E-118 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 TVD_06510 c7fc7690a87cc3e63b20aece96a6518b 434 SUPERFAMILY SSF55205 4 428 5.07E-127 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 TVD_13130 9c89093dd912ded383981552ea18c7d6 446 Pfam PF00672 HAMP domain 173 221 2.0E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_13130 9c89093dd912ded383981552ea18c7d6 446 SMART SM00267 252 428 5.8E-63 T 11-10-2018 IPR000160 GGDEF domain TVD_13130 9c89093dd912ded383981552ea18c7d6 446 Gene3D G3DSA:3.30.70.270 248 429 1.9E-60 T 11-10-2018 TVD_13130 9c89093dd912ded383981552ea18c7d6 446 SMART SM00304 171 225 1.5E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_13130 9c89093dd912ded383981552ea18c7d6 446 Gene3D G3DSA:1.20.1480.50 132 232 3.9E-6 T 11-10-2018 TVD_13130 9c89093dd912ded383981552ea18c7d6 446 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 259 426 3.9E-51 T 11-10-2018 IPR000160 GGDEF domain TVD_13130 9c89093dd912ded383981552ea18c7d6 446 Pfam PF00990 Diguanylate cyclase, GGDEF domain 264 424 9.3E-48 T 11-10-2018 IPR000160 GGDEF domain TVD_13130 9c89093dd912ded383981552ea18c7d6 446 SUPERFAMILY SSF55073 268 428 1.41E-48 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_13130 9c89093dd912ded383981552ea18c7d6 446 SUPERFAMILY SSF158472 172 222 5.75E-5 T 11-10-2018 TVD_04935 aa8d738d73ce982c8609f3d4ed6b3efa 201 Pfam PF09976 Tetratricopeptide repeat-like domain 14 200 5.5E-48 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 TVD_04935 aa8d738d73ce982c8609f3d4ed6b3efa 201 Gene3D G3DSA:1.25.40.10 38 198 1.9E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_04935 aa8d738d73ce982c8609f3d4ed6b3efa 201 PIRSF PIRSF006170 1 201 1.6E-48 T 11-10-2018 IPR026039 Uncharacterised protein family UPF0070 TVD_04935 aa8d738d73ce982c8609f3d4ed6b3efa 201 SUPERFAMILY SSF48452 57 151 1.45E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_04310 d6a53b10cfdeecb7903c5e09918d5274 453 Gene3D G3DSA:3.40.50.2300 1 129 2.5E-31 T 11-10-2018 TVD_04310 d6a53b10cfdeecb7903c5e09918d5274 453 Gene3D G3DSA:3.40.50.300 137 312 8.6E-66 T 11-10-2018 TVD_04310 d6a53b10cfdeecb7903c5e09918d5274 453 SUPERFAMILY SSF52540 141 380 2.18E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04310 d6a53b10cfdeecb7903c5e09918d5274 453 Pfam PF00158 Sigma-54 interaction domain 141 307 1.5E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TVD_04310 d6a53b10cfdeecb7903c5e09918d5274 453 SMART SM00382 161 305 6.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_04310 d6a53b10cfdeecb7903c5e09918d5274 453 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TVD_04310 d6a53b10cfdeecb7903c5e09918d5274 453 Gene3D G3DSA:1.10.8.60 313 386 7.0E-20 T 11-10-2018 TVD_04310 d6a53b10cfdeecb7903c5e09918d5274 453 SMART SM00448 2 109 5.8E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_04310 d6a53b10cfdeecb7903c5e09918d5274 453 Pfam PF00072 Response regulator receiver domain 4 108 4.8E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_04310 d6a53b10cfdeecb7903c5e09918d5274 453 SUPERFAMILY SSF52172 1 185 1.32E-39 T 11-10-2018 IPR011006 CheY-like superfamily TVD_04310 d6a53b10cfdeecb7903c5e09918d5274 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 PIRSF PIRSF001400 1 423 3.7E-182 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 Gene3D G3DSA:3.30.390.10 1 124 2.0E-49 T 11-10-2018 IPR029017 Enolase-like, N-terminal TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 Hamap MF_00318 Enolase [eno]. 2 409 43.697 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 PRINTS PR00148 Enolase signature 332 346 1.3E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 PRINTS PR00148 Enolase signature 159 172 1.3E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 PRINTS PR00148 Enolase signature 309 320 1.3E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 PRINTS PR00148 Enolase signature 361 378 1.3E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 PRINTS PR00148 Enolase signature 37 51 1.3E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 PRINTS PR00148 Enolase signature 105 121 1.3E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 421 7.0E-202 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 Gene3D G3DSA:3.20.20.120 126 424 2.6E-130 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 Pfam PF03952 Enolase, N-terminal domain 4 131 6.1E-52 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 ProSitePatterns PS00164 Enolase signature. 332 345 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 SUPERFAMILY SSF51604 137 422 4.9E-129 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 SMART SM01192 137 423 2.1E-222 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 420 3.3E-132 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 SMART SM01193 4 132 9.5E-79 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TVD_07150 9bd1baa53336d97ddaf68d508144a8a7 425 SUPERFAMILY SSF54826 3 134 9.68E-48 T 11-10-2018 TVD_05680 87adca0df4595e5286f9001c567b1d38 227 Gene3D G3DSA:3.30.420.40 94 186 1.3E-63 T 11-10-2018 TVD_05680 87adca0df4595e5286f9001c567b1d38 227 SUPERFAMILY SSF53067 111 215 4.01E-15 T 11-10-2018 TVD_05680 87adca0df4595e5286f9001c567b1d38 227 SUPERFAMILY SSF53067 3 104 3.88E-26 T 11-10-2018 TVD_05680 87adca0df4595e5286f9001c567b1d38 227 Pfam PF00814 Glycoprotease family 28 146 1.6E-28 T 11-10-2018 IPR000905 Gcp-like domain TVD_05680 87adca0df4595e5286f9001c567b1d38 227 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 217 1.4E-52 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 TVD_05680 87adca0df4595e5286f9001c567b1d38 227 Gene3D G3DSA:3.30.420.40 3 217 1.3E-63 T 11-10-2018 TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 Gene3D G3DSA:1.10.287.470 111 137 2.0E-6 T 11-10-2018 TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 Gene3D G3DSA:1.10.287.470 264 296 1.2E-12 T 11-10-2018 TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 SUPERFAMILY SSF111369 79 140 1.7E-5 T 11-10-2018 TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 Gene3D G3DSA:2.40.30.170 343 405 1.2E-12 T 11-10-2018 TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 Gene3D G3DSA:2.40.50.100 80 110 2.0E-6 T 11-10-2018 TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 38 458 4.2E-104 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 Pfam PF13437 HlyD family secretion protein 310 411 1.3E-19 T 11-10-2018 TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 Pfam PF13533 Biotin-lipoyl like 80 123 8.2E-8 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 Gene3D G3DSA:2.40.50.100 297 342 1.2E-12 T 11-10-2018 TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 379 402 3.4E-46 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 355 379 3.4E-46 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 437 457 3.4E-46 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 322 343 3.4E-46 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 422 437 3.4E-46 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 89 109 3.4E-46 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TVD_04435 d25d5d330cac448eaf7197ce0bbb3cf4 458 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 47 70 3.4E-46 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TVD_09915 52f7269a1682b691c3c4bb7b7372e7df 457 SUPERFAMILY SSF51905 5 413 7.51E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_09915 52f7269a1682b691c3c4bb7b7372e7df 457 Pfam PF01593 Flavin containing amine oxidoreductase 13 409 1.1E-18 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 TVD_09915 52f7269a1682b691c3c4bb7b7372e7df 457 Gene3D G3DSA:3.90.660.10 196 294 3.2E-5 T 11-10-2018 TVD_09915 52f7269a1682b691c3c4bb7b7372e7df 457 Gene3D G3DSA:3.50.50.60 215 284 3.2E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_09915 52f7269a1682b691c3c4bb7b7372e7df 457 Gene3D G3DSA:3.50.50.60 1 111 1.4E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_09605 3e6f40daf1b0ea9b142667969d187b33 148 Gene3D G3DSA:3.40.1260.10 30 148 1.5E-32 T 11-10-2018 IPR027396 DsrEFH-like TVD_09605 3e6f40daf1b0ea9b142667969d187b33 148 Pfam PF02635 DsrE/DsrF-like family 56 145 1.2E-11 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_09605 3e6f40daf1b0ea9b142667969d187b33 148 SUPERFAMILY SSF75169 32 145 1.27E-23 T 11-10-2018 IPR027396 DsrEFH-like TVD_10755 b1cdb0905a7e9a0b2bfd1c05b5dfdad9 80 SMART SM00530 19 74 9.4E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TVD_10755 b1cdb0905a7e9a0b2bfd1c05b5dfdad9 80 Gene3D G3DSA:1.10.260.40 2 79 4.8E-20 T 11-10-2018 TVD_10755 b1cdb0905a7e9a0b2bfd1c05b5dfdad9 80 Pfam PF01381 Helix-turn-helix 20 74 1.3E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TVD_10755 b1cdb0905a7e9a0b2bfd1c05b5dfdad9 80 SUPERFAMILY SSF47413 13 77 1.21E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TVD_12720 4a48c0f8d64a8822e06892507f3a92a2 302 SUPERFAMILY SSF56112 8 297 5.83E-42 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily TVD_12720 4a48c0f8d64a8822e06892507f3a92a2 302 PIRSF PIRSF006221 12 302 9.9E-82 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 TVD_12720 4a48c0f8d64a8822e06892507f3a92a2 302 Pfam PF03881 Fructosamine kinase 14 299 4.1E-94 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 TVD_12720 4a48c0f8d64a8822e06892507f3a92a2 302 Gene3D G3DSA:3.90.1200.10 110 302 2.7E-59 T 11-10-2018 TVD_12720 4a48c0f8d64a8822e06892507f3a92a2 302 Gene3D G3DSA:3.30.200.20 12 104 2.3E-15 T 11-10-2018 TVD_13345 6293b7e1333a3ebb87b809ac3dbed5d6 359 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 190 350 1.8E-47 T 11-10-2018 IPR000160 GGDEF domain TVD_13345 6293b7e1333a3ebb87b809ac3dbed5d6 359 Gene3D G3DSA:3.30.70.270 179 352 1.7E-55 T 11-10-2018 TVD_13345 6293b7e1333a3ebb87b809ac3dbed5d6 359 SUPERFAMILY SSF55781 23 164 4.58E-26 T 11-10-2018 TVD_13345 6293b7e1333a3ebb87b809ac3dbed5d6 359 SMART SM00065 20 162 3.4E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_13345 6293b7e1333a3ebb87b809ac3dbed5d6 359 SMART SM00267 182 352 7.4E-61 T 11-10-2018 IPR000160 GGDEF domain TVD_13345 6293b7e1333a3ebb87b809ac3dbed5d6 359 SUPERFAMILY SSF55073 198 350 4.71E-46 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_13345 6293b7e1333a3ebb87b809ac3dbed5d6 359 Gene3D G3DSA:3.30.450.40 17 166 2.2E-18 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_13345 6293b7e1333a3ebb87b809ac3dbed5d6 359 Pfam PF01590 GAF domain 49 149 6.5E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_13345 6293b7e1333a3ebb87b809ac3dbed5d6 359 Pfam PF00990 Diguanylate cyclase, GGDEF domain 193 348 6.9E-45 T 11-10-2018 IPR000160 GGDEF domain TVD_11410 b4ff6d01b802b12b14d8056bef3f941d 159 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 2.0E-53 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 TVD_11410 b4ff6d01b802b12b14d8056bef3f941d 159 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 1.0E-52 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 TVD_11410 b4ff6d01b802b12b14d8056bef3f941d 159 Pfam PF01668 SmpB protein 15 158 6.7E-59 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 TVD_11410 b4ff6d01b802b12b14d8056bef3f941d 159 SUPERFAMILY SSF74982 9 139 4.05E-51 T 11-10-2018 IPR023620 Small protein B TVD_11410 b4ff6d01b802b12b14d8056bef3f941d 159 Hamap MF_00023 SsrA-binding protein [smpB]. 1 159 73.833 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 TVD_11410 b4ff6d01b802b12b14d8056bef3f941d 159 Gene3D G3DSA:2.40.280.10 7 135 2.6E-47 T 11-10-2018 IPR023620 Small protein B TVD_11410 b4ff6d01b802b12b14d8056bef3f941d 159 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site TVD_01625 6ce95e04ca1126e3bc1a67070b7c8ec4 364 Hamap MF_00323 Ferrochelatase [hemH]. 15 336 37.459 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 TVD_01625 6ce95e04ca1126e3bc1a67070b7c8ec4 364 TIGRFAM TIGR00109 hemH: ferrochelatase 17 336 1.2E-96 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 TVD_01625 6ce95e04ca1126e3bc1a67070b7c8ec4 364 SUPERFAMILY SSF53800 17 340 4.58E-108 T 11-10-2018 TVD_01625 6ce95e04ca1126e3bc1a67070b7c8ec4 364 ProSitePatterns PS00534 Ferrochelatase signature. 205 223 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 TVD_01625 6ce95e04ca1126e3bc1a67070b7c8ec4 364 Gene3D G3DSA:3.40.50.1400 179 317 2.4E-97 T 11-10-2018 TVD_01625 6ce95e04ca1126e3bc1a67070b7c8ec4 364 Pfam PF00762 Ferrochelatase 17 336 1.5E-112 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 TVD_01625 6ce95e04ca1126e3bc1a67070b7c8ec4 364 Gene3D G3DSA:3.40.50.1400 18 336 2.4E-97 T 11-10-2018 TVD_04940 0753449dbe6aab112d291a8297860e38 386 Pfam PF13360 PQQ-like domain 73 306 2.3E-37 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat TVD_04940 0753449dbe6aab112d291a8297860e38 386 SUPERFAMILY SSF50998 21 378 1.02E-59 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TVD_04940 0753449dbe6aab112d291a8297860e38 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 4 380 32.776 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB TVD_04940 0753449dbe6aab112d291a8297860e38 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 2 378 3.1E-110 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB TVD_04940 0753449dbe6aab112d291a8297860e38 386 Gene3D G3DSA:2.130.10.10 16 380 1.4E-79 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TVD_04940 0753449dbe6aab112d291a8297860e38 386 SMART SM00564 236 268 160.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TVD_04940 0753449dbe6aab112d291a8297860e38 386 SMART SM00564 140 172 0.22 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TVD_04940 0753449dbe6aab112d291a8297860e38 386 SMART SM00564 60 91 26.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TVD_04940 0753449dbe6aab112d291a8297860e38 386 SMART SM00564 359 383 370.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TVD_04940 0753449dbe6aab112d291a8297860e38 386 SMART SM00564 100 132 110.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TVD_04940 0753449dbe6aab112d291a8297860e38 386 SMART SM00564 277 308 150.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TVD_04940 0753449dbe6aab112d291a8297860e38 386 SMART SM00564 318 349 0.0018 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TVD_04940 0753449dbe6aab112d291a8297860e38 386 SMART SM00564 186 217 28.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TVD_04940 0753449dbe6aab112d291a8297860e38 386 Pfam PF13570 PQQ-like domain 353 380 4.7E-4 T 11-10-2018 IPR025666 Pyrrolo-quinoline quinone-like domain TVD_06915 fb3f3d083dc884c32bc1e627d05dadfb 840 Pfam PF02687 FtsX-like permease family 743 830 3.0E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TVD_11865 4fa289d30c5422c9f1cd6a700fe4008a 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 278 3.8E-101 T 11-10-2018 IPR002220 DapA-like GO:0016829 TVD_11865 4fa289d30c5422c9f1cd6a700fe4008a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.1E-34 T 11-10-2018 IPR002220 DapA-like GO:0016829 TVD_11865 4fa289d30c5422c9f1cd6a700fe4008a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 2.1E-34 T 11-10-2018 IPR002220 DapA-like GO:0016829 TVD_11865 4fa289d30c5422c9f1cd6a700fe4008a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.1E-34 T 11-10-2018 IPR002220 DapA-like GO:0016829 TVD_11865 4fa289d30c5422c9f1cd6a700fe4008a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.1E-34 T 11-10-2018 IPR002220 DapA-like GO:0016829 TVD_11865 4fa289d30c5422c9f1cd6a700fe4008a 292 SMART SM01130 1 289 3.5E-145 T 11-10-2018 IPR002220 DapA-like GO:0016829 TVD_11865 4fa289d30c5422c9f1cd6a700fe4008a 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TVD_11865 4fa289d30c5422c9f1cd6a700fe4008a 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 TVD_11865 4fa289d30c5422c9f1cd6a700fe4008a 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 66.615 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TVD_11865 4fa289d30c5422c9f1cd6a700fe4008a 292 PIRSF PIRSF001365 1 292 3.7E-94 T 11-10-2018 IPR002220 DapA-like GO:0016829 TVD_11865 4fa289d30c5422c9f1cd6a700fe4008a 292 Gene3D G3DSA:3.20.20.70 2 291 1.8E-110 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_11865 4fa289d30c5422c9f1cd6a700fe4008a 292 SUPERFAMILY SSF51569 1 289 5.86E-104 T 11-10-2018 TVD_11865 4fa289d30c5422c9f1cd6a700fe4008a 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 280 3.1E-108 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 TVD_10810 c7165fccc77cbb6b1abae1fef085ad33 251 SUPERFAMILY SSF56300 8 244 9.49E-24 T 11-10-2018 TVD_10810 c7165fccc77cbb6b1abae1fef085ad33 251 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 242 90.349 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 TVD_10810 c7165fccc77cbb6b1abae1fef085ad33 251 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 8 232 1.6E-70 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 TVD_10810 c7165fccc77cbb6b1abae1fef085ad33 251 Pfam PF00149 Calcineurin-like phosphoesterase 8 199 8.5E-5 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 TVD_10810 c7165fccc77cbb6b1abae1fef085ad33 251 Gene3D G3DSA:3.60.21.10 7 231 1.4E-10 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TVD_06730 a72acf0023632488099d19955e6d3d89 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 3.4E-65 T 11-10-2018 TVD_06730 a72acf0023632488099d19955e6d3d89 245 Gene3D G3DSA:3.40.50.720 3 245 7.7E-84 T 11-10-2018 TVD_06730 a72acf0023632488099d19955e6d3d89 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TVD_06730 a72acf0023632488099d19955e6d3d89 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 8.3E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_06730 a72acf0023632488099d19955e6d3d89 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 8.3E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_06730 a72acf0023632488099d19955e6d3d89 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.3E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_06730 a72acf0023632488099d19955e6d3d89 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.6E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_06730 a72acf0023632488099d19955e6d3d89 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 8.6E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_06730 a72acf0023632488099d19955e6d3d89 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.6E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_06730 a72acf0023632488099d19955e6d3d89 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 8.6E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_06730 a72acf0023632488099d19955e6d3d89 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 8.6E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_06730 a72acf0023632488099d19955e6d3d89 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 8.6E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_06730 a72acf0023632488099d19955e6d3d89 245 SUPERFAMILY SSF51735 5 244 3.84E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_06730 a72acf0023632488099d19955e6d3d89 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 183 7.3E-7 T 11-10-2018 TVD_06730 a72acf0023632488099d19955e6d3d89 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.6E-98 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TVD_03860 ad4a3b3069b968ce1dc42564bde184c0 115 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 5.2E-17 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain TVD_03860 ad4a3b3069b968ce1dc42564bde184c0 115 SUPERFAMILY SSF54909 1 99 2.46E-28 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel TVD_03860 ad4a3b3069b968ce1dc42564bde184c0 115 Gene3D G3DSA:3.30.70.100 1 94 4.5E-23 T 11-10-2018 TVD_02645 8e807c45debdd159121c71c2455ba06b 237 Gene3D G3DSA:3.10.450.70 21 79 2.1E-14 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 TVD_02645 8e807c45debdd159121c71c2455ba06b 237 Gene3D G3DSA:3.40.30.10 80 234 6.3E-37 T 11-10-2018 TVD_02645 8e807c45debdd159121c71c2455ba06b 237 SUPERFAMILY SSF52833 109 233 1.86E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_02645 8e807c45debdd159121c71c2455ba06b 237 Pfam PF10411 Disulfide bond isomerase protein N-terminus 29 80 2.7E-19 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal TVD_02645 8e807c45debdd159121c71c2455ba06b 237 SUPERFAMILY SSF54423 34 82 3.01E-13 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 TVD_02645 8e807c45debdd159121c71c2455ba06b 237 Pfam PF13098 Thioredoxin-like domain 111 228 1.4E-22 T 11-10-2018 IPR012336 Thioredoxin-like fold TVD_00215 854ad00c5fd9c9174d5d91d6f5785d3e 1066 Gene3D G3DSA:3.40.50.300 539 716 5.4E-32 T 11-10-2018 TVD_00215 854ad00c5fd9c9174d5d91d6f5785d3e 1066 SUPERFAMILY SSF52540 389 693 3.28E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_00215 854ad00c5fd9c9174d5d91d6f5785d3e 1066 Pfam PF11907 Domain of unknown function (DUF3427) 908 1059 1.2E-24 T 11-10-2018 IPR021835 Protein of unknown function DUF3427 TVD_00215 854ad00c5fd9c9174d5d91d6f5785d3e 1066 SMART SM00487 332 517 2.4E-13 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_00215 854ad00c5fd9c9174d5d91d6f5785d3e 1066 Gene3D G3DSA:3.40.50.300 323 505 8.1E-41 T 11-10-2018 TVD_00215 854ad00c5fd9c9174d5d91d6f5785d3e 1066 SMART SM00490 591 672 6.9E-12 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_00215 854ad00c5fd9c9174d5d91d6f5785d3e 1066 Pfam PF04851 Type III restriction enzyme, res subunit 336 490 3.6E-25 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TVD_00215 854ad00c5fd9c9174d5d91d6f5785d3e 1066 Gene3D G3DSA:3.30.870.10 144 307 2.4E-19 T 11-10-2018 TVD_00215 854ad00c5fd9c9174d5d91d6f5785d3e 1066 Pfam PF00271 Helicase conserved C-terminal domain 583 670 1.2E-10 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_00215 854ad00c5fd9c9174d5d91d6f5785d3e 1066 SUPERFAMILY SSF56024 221 295 7.53E-5 T 11-10-2018 TVD_13640 3c00e4ac17cee35e83d9b53fa43efa4a 180 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 40.89 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 TVD_13640 3c00e4ac17cee35e83d9b53fa43efa4a 180 Gene3D G3DSA:3.60.20.10 2 178 3.1E-66 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_13640 3c00e4ac17cee35e83d9b53fa43efa4a 180 SUPERFAMILY SSF56235 3 177 1.45E-58 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_13640 3c00e4ac17cee35e83d9b53fa43efa4a 180 Pfam PF00227 Proteasome subunit 5 174 9.4E-23 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 TVD_13640 3c00e4ac17cee35e83d9b53fa43efa4a 180 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 177 1.8E-84 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 TVD_13640 3c00e4ac17cee35e83d9b53fa43efa4a 180 PIRSF PIRSF039093 1 180 1.0E-88 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 TVD_03070 b6ed325ca92c12c0f0b815b10569bdf7 213 SUPERFAMILY SSF46689 9 73 3.4E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_03070 b6ed325ca92c12c0f0b815b10569bdf7 213 Gene3D G3DSA:1.10.10.60 5 59 3.6E-15 T 11-10-2018 TVD_03070 b6ed325ca92c12c0f0b815b10569bdf7 213 Gene3D G3DSA:1.10.357.10 60 203 2.9E-32 T 11-10-2018 TVD_03070 b6ed325ca92c12c0f0b815b10569bdf7 213 Pfam PF16859 Bacterial transcriptional repressor C-terminal 117 193 1.0E-8 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TVD_03070 b6ed325ca92c12c0f0b815b10569bdf7 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.6E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TVD_03070 b6ed325ca92c12c0f0b815b10569bdf7 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.6E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TVD_03070 b6ed325ca92c12c0f0b815b10569bdf7 213 SUPERFAMILY SSF48498 91 202 6.82E-23 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TVD_03070 b6ed325ca92c12c0f0b815b10569bdf7 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 1.4E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TVD_03670 3670d4b9de86e80de65298720743b332 497 SUPERFAMILY SSF54814 204 282 1.9E-29 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TVD_03670 3670d4b9de86e80de65298720743b332 497 SUPERFAMILY SSF50249 136 203 1.4E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_03670 3670d4b9de86e80de65298720743b332 497 Pfam PF00575 S1 RNA binding domain 136 199 2.5E-6 T 11-10-2018 IPR003029 S1 domain GO:0003676 TVD_03670 3670d4b9de86e80de65298720743b332 497 Gene3D G3DSA:1.10.150.20 356 425 1.9E-24 T 11-10-2018 TVD_03670 3670d4b9de86e80de65298720743b332 497 Gene3D G3DSA:3.30.300.20 203 281 7.4E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TVD_03670 3670d4b9de86e80de65298720743b332 497 SUPERFAMILY SSF47794 359 420 5.97E-15 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 TVD_03670 3670d4b9de86e80de65298720743b332 497 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 2.5E-125 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 TVD_03670 3670d4b9de86e80de65298720743b332 497 Pfam PF08529 NusA N-terminal domain 4 127 5.5E-38 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 TVD_03670 3670d4b9de86e80de65298720743b332 497 SMART SM00322 305 369 0.0035 T 11-10-2018 IPR004087 K Homology domain GO:0003676 TVD_03670 3670d4b9de86e80de65298720743b332 497 SMART SM00322 234 297 12.0 T 11-10-2018 IPR004087 K Homology domain GO:0003676 TVD_03670 3670d4b9de86e80de65298720743b332 497 SMART SM00316 137 204 4.9E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 TVD_03670 3670d4b9de86e80de65298720743b332 497 Gene3D G3DSA:1.10.150.20 434 492 6.6E-22 T 11-10-2018 TVD_03670 3670d4b9de86e80de65298720743b332 497 SUPERFAMILY SSF69705 1 129 1.57E-41 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 TVD_03670 3670d4b9de86e80de65298720743b332 497 SUPERFAMILY SSF47794 432 493 4.55E-14 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 TVD_03670 3670d4b9de86e80de65298720743b332 497 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 418 4.2E-15 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication TVD_03670 3670d4b9de86e80de65298720743b332 497 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 414 29.886 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 TVD_03670 3670d4b9de86e80de65298720743b332 497 SUPERFAMILY SSF54814 283 346 1.96E-16 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TVD_03670 3670d4b9de86e80de65298720743b332 497 Gene3D G3DSA:3.30.1480.10 1 133 2.0E-44 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 TVD_03670 3670d4b9de86e80de65298720743b332 497 Gene3D G3DSA:3.30.300.20 282 351 1.4E-26 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TVD_03670 3670d4b9de86e80de65298720743b332 497 Pfam PF13184 NusA-like KH domain 234 301 8.4E-29 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 TVD_03670 3670d4b9de86e80de65298720743b332 497 Gene3D G3DSA:2.40.50.140 139 202 5.9E-19 T 11-10-2018 TVD_03670 3670d4b9de86e80de65298720743b332 497 Pfam PF14520 Helix-hairpin-helix domain 435 489 3.2E-8 T 11-10-2018 TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 Gene3D G3DSA:3.30.450.20 714 848 7.8E-17 T 11-10-2018 TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 Pfam PF01339 CheB methylesterase 16 191 4.9E-56 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 Pfam PF13596 PAS domain 732 837 1.6E-29 T 11-10-2018 TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 SMART SM00138 211 474 3.8E-82 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 Pfam PF03705 CheR methyltransferase, all-alpha domain 214 263 3.9E-14 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 SUPERFAMILY SSF47757 214 280 3.27E-11 T 11-10-2018 TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 Pfam PF01739 CheR methyltransferase, SAM binding domain 278 469 2.1E-51 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 Gene3D G3DSA:3.40.50.150 276 476 7.7E-62 T 11-10-2018 TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 SUPERFAMILY SSF52738 12 197 1.2E-58 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 SUPERFAMILY SSF53335 277 473 1.81E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 SUPERFAMILY SSF55785 717 837 4.36E-10 T 11-10-2018 IPR035965 PAS domain superfamily TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 Gene3D G3DSA:3.40.50.180 7 202 1.8E-66 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 PRINTS PR00996 Glutamate methyltransferase family signature 433 456 1.3E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 PRINTS PR00996 Glutamate methyltransferase family signature 270 282 1.3E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 PRINTS PR00996 Glutamate methyltransferase family signature 233 246 1.3E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 PRINTS PR00996 Glutamate methyltransferase family signature 348 364 1.3E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 PRINTS PR00996 Glutamate methyltransferase family signature 310 330 1.3E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_07710 59959fc4c4668d77f93743b7e10cf286 848 PRINTS PR00996 Glutamate methyltransferase family signature 414 428 1.3E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_11465 2024ad2837661a441c40cfeee2eb666e 494 Pfam PF01256 Carbohydrate kinase 246 487 9.4E-50 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 TVD_11465 2024ad2837661a441c40cfeee2eb666e 494 SUPERFAMILY SSF64153 7 245 1.15E-56 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 TVD_11465 2024ad2837661a441c40cfeee2eb666e 494 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 7 208 22.148 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TVD_11465 2024ad2837661a441c40cfeee2eb666e 494 PIRSF PIRSF017184 4 491 6.7E-117 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 TVD_11465 2024ad2837661a441c40cfeee2eb666e 494 Gene3D G3DSA:3.40.1190.20 218 491 7.5E-76 T 11-10-2018 IPR029056 Ribokinase-like TVD_11465 2024ad2837661a441c40cfeee2eb666e 494 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 223 491 21.152 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 TVD_11465 2024ad2837661a441c40cfeee2eb666e 494 SUPERFAMILY SSF53613 221 489 1.03E-65 T 11-10-2018 IPR029056 Ribokinase-like TVD_11465 2024ad2837661a441c40cfeee2eb666e 494 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 20 208 2.1E-44 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TVD_11465 2024ad2837661a441c40cfeee2eb666e 494 Pfam PF03853 YjeF-related protein N-terminus 28 187 6.2E-44 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TVD_11465 2024ad2837661a441c40cfeee2eb666e 494 Gene3D G3DSA:3.40.50.10260 2 214 1.7E-56 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 TVD_11465 2024ad2837661a441c40cfeee2eb666e 494 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 229 489 2.2E-61 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 TVD_11465 2024ad2837661a441c40cfeee2eb666e 494 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 429 439 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site TVD_12925 202d76e66fe6ff849ceb513c55ea207e 969 SUPERFAMILY SSF50692 769 919 2.49E-28 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily TVD_12925 202d76e66fe6ff849ceb513c55ea207e 969 SUPERFAMILY SSF53706 12 739 3.27E-140 T 11-10-2018 TVD_12925 202d76e66fe6ff849ceb513c55ea207e 969 Gene3D G3DSA:2.20.25.90 8 72 2.1E-16 T 11-10-2018 TVD_12925 202d76e66fe6ff849ceb513c55ea207e 969 SMART SM00926 13 67 1.4E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_12925 202d76e66fe6ff849ceb513c55ea207e 969 Gene3D G3DSA:2.40.40.20 750 909 2.5E-24 T 11-10-2018 TVD_12925 202d76e66fe6ff849ceb513c55ea207e 969 Pfam PF00384 Molybdopterin oxidoreductase 70 588 2.1E-32 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_12925 202d76e66fe6ff849ceb513c55ea207e 969 Gene3D G3DSA:3.40.50.740 473 642 1.1E-16 T 11-10-2018 TVD_12925 202d76e66fe6ff849ceb513c55ea207e 969 Gene3D G3DSA:3.40.50.740 73 160 6.5E-13 T 11-10-2018 TVD_12925 202d76e66fe6ff849ceb513c55ea207e 969 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 17 63 1.4E-14 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_12925 202d76e66fe6ff849ceb513c55ea207e 969 Pfam PF01568 Molydopterin dinucleotide binding domain 775 877 2.0E-10 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 TVD_05390 23c3631e31c08634189ae69a72dfab58 171 Pfam PF03473 MOSC domain 60 163 1.2E-5 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 TVD_05390 23c3631e31c08634189ae69a72dfab58 171 Gene3D G3DSA:2.40.33.20 17 169 1.0E-13 T 11-10-2018 TVD_05390 23c3631e31c08634189ae69a72dfab58 171 SUPERFAMILY SSF50800 18 165 2.2E-22 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily TVD_02975 2ba14ede280dae9ea413d7ec5edc9c07 835 PIRSF PIRSF005496 9 835 2.5E-288 T 11-10-2018 TVD_02975 2ba14ede280dae9ea413d7ec5edc9c07 835 Gene3D G3DSA:1.20.120.1080 382 462 2.4E-10 T 11-10-2018 TVD_02975 2ba14ede280dae9ea413d7ec5edc9c07 835 SMART SM00490 240 341 2.1E-16 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_02975 2ba14ede280dae9ea413d7ec5edc9c07 835 SUPERFAMILY SSF52540 20 350 5.4E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_02975 2ba14ede280dae9ea413d7ec5edc9c07 835 Pfam PF00271 Helicase conserved C-terminal domain 217 340 2.2E-14 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_02975 2ba14ede280dae9ea413d7ec5edc9c07 835 SMART SM00847 400 499 6.8E-13 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 TVD_02975 2ba14ede280dae9ea413d7ec5edc9c07 835 Gene3D G3DSA:3.40.50.300 17 189 3.6E-45 T 11-10-2018 TVD_02975 2ba14ede280dae9ea413d7ec5edc9c07 835 Pfam PF04408 Helicase associated domain (HA2) 401 457 1.3E-10 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 TVD_02975 2ba14ede280dae9ea413d7ec5edc9c07 835 Pfam PF08482 ATP-dependent helicase C-terminal 691 822 2.8E-55 T 11-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal TVD_02975 2ba14ede280dae9ea413d7ec5edc9c07 835 SMART SM00487 7 196 2.4E-14 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_02975 2ba14ede280dae9ea413d7ec5edc9c07 835 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 13 835 4.4E-286 T 11-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 TVD_02975 2ba14ede280dae9ea413d7ec5edc9c07 835 Gene3D G3DSA:3.40.50.300 190 357 1.1E-53 T 11-10-2018 TVD_07415 4245b7258788e82b0c60ec548f4a92a0 690 SUPERFAMILY SSF52091 570 681 5.1E-21 T 11-10-2018 IPR036513 STAS domain superfamily TVD_07415 4245b7258788e82b0c60ec548f4a92a0 690 Pfam PF01740 STAS domain 571 676 1.2E-19 T 11-10-2018 IPR002645 STAS domain TVD_07415 4245b7258788e82b0c60ec548f4a92a0 690 Gene3D G3DSA:3.30.750.24 564 686 1.2E-28 T 11-10-2018 IPR036513 STAS domain superfamily TVD_07415 4245b7258788e82b0c60ec548f4a92a0 690 Pfam PF00916 Sulfate permease family 21 230 8.2E-53 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 TVD_07415 4245b7258788e82b0c60ec548f4a92a0 690 Pfam PF00916 Sulfate permease family 355 516 2.3E-49 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 TVD_05170 30ad6cfca6edf034b4e10b970f8f9c9e 255 Pfam PF00535 Glycosyl transferase family 2 1 120 3.0E-32 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TVD_05170 30ad6cfca6edf034b4e10b970f8f9c9e 255 Gene3D G3DSA:3.90.550.10 1 223 3.1E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_05170 30ad6cfca6edf034b4e10b970f8f9c9e 255 SUPERFAMILY SSF53448 1 211 2.44E-49 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_11495 32460bff6c5848fa023deda920833b6b 281 Gene3D G3DSA:3.40.50.720 1 281 2.9E-92 T 11-10-2018 TVD_11495 32460bff6c5848fa023deda920833b6b 281 Pfam PF13460 NAD(P)H-binding 10 172 5.0E-8 T 11-10-2018 IPR016040 NAD(P)-binding domain TVD_11495 32460bff6c5848fa023deda920833b6b 281 SUPERFAMILY SSF51735 3 277 6.03E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_08455 b08ae2cbe0092194a504c052c726a379 452 SUPERFAMILY SSF54631 137 269 7.45E-34 T 11-10-2018 TVD_08455 b08ae2cbe0092194a504c052c726a379 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 16 451 4.3E-105 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 TVD_08455 b08ae2cbe0092194a504c052c726a379 452 Gene3D G3DSA:1.25.60.10 7 132 1.0E-16 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily TVD_08455 b08ae2cbe0092194a504c052c726a379 452 Gene3D G3DSA:3.10.580.10 133 261 5.4E-44 T 11-10-2018 TVD_08455 b08ae2cbe0092194a504c052c726a379 452 SUPERFAMILY SSF161093 284 450 5.49E-45 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 TVD_08455 b08ae2cbe0092194a504c052c726a379 452 Gene3D G3DSA:1.10.357.20 275 450 4.4E-52 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain TVD_08455 b08ae2cbe0092194a504c052c726a379 452 Pfam PF00571 CBS domain 201 255 9.0E-10 T 11-10-2018 IPR000644 CBS domain TVD_08455 b08ae2cbe0092194a504c052c726a379 452 Pfam PF00571 CBS domain 137 193 7.8E-7 T 11-10-2018 IPR000644 CBS domain TVD_08455 b08ae2cbe0092194a504c052c726a379 452 Pfam PF03448 MgtE intracellular N domain 37 135 6.2E-22 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain TVD_08455 b08ae2cbe0092194a504c052c726a379 452 SUPERFAMILY SSF158791 12 134 1.44E-22 T 11-10-2018 TVD_08455 b08ae2cbe0092194a504c052c726a379 452 SMART SM00116 208 256 3.6E-6 T 11-10-2018 IPR000644 CBS domain TVD_08455 b08ae2cbe0092194a504c052c726a379 452 SMART SM00116 144 197 6.1 T 11-10-2018 IPR000644 CBS domain TVD_08455 b08ae2cbe0092194a504c052c726a379 452 SMART SM00924 34 137 7.2E-24 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain TVD_08455 b08ae2cbe0092194a504c052c726a379 452 Pfam PF01769 Divalent cation transporter 323 443 1.7E-24 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 TVD_02300 368699b27fb75cc2a0d733913280a7e8 177 Pfam PF00467 KOW motif 126 156 2.3E-7 T 11-10-2018 IPR005824 KOW TVD_02300 368699b27fb75cc2a0d733913280a7e8 177 Gene3D G3DSA:3.30.70.940 1 117 7.0E-47 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TVD_02300 368699b27fb75cc2a0d733913280a7e8 177 Gene3D G3DSA:2.30.30.30 118 176 7.1E-26 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 TVD_02300 368699b27fb75cc2a0d733913280a7e8 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 6.5E-70 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TVD_02300 368699b27fb75cc2a0d733913280a7e8 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site TVD_02300 368699b27fb75cc2a0d733913280a7e8 177 SMART SM00739 123 150 6.8E-6 T 11-10-2018 IPR005824 KOW TVD_02300 368699b27fb75cc2a0d733913280a7e8 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 25.268 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TVD_02300 368699b27fb75cc2a0d733913280a7e8 177 SUPERFAMILY SSF50104 121 176 2.66E-20 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily TVD_02300 368699b27fb75cc2a0d733913280a7e8 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 3.9E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TVD_02300 368699b27fb75cc2a0d733913280a7e8 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 3.9E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TVD_02300 368699b27fb75cc2a0d733913280a7e8 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 3.9E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 TVD_02300 368699b27fb75cc2a0d733913280a7e8 177 SMART SM00738 2 111 6.3E-48 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TVD_02300 368699b27fb75cc2a0d733913280a7e8 177 SUPERFAMILY SSF82679 4 114 2.09E-39 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TVD_02300 368699b27fb75cc2a0d733913280a7e8 177 Pfam PF02357 Transcription termination factor nusG 4 108 2.4E-26 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TVD_08595 8bc1511113409cd64ce95e1c43e76eed 163 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 53 1.5E-19 T 11-10-2018 TVD_08595 8bc1511113409cd64ce95e1c43e76eed 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 5.5E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TVD_08595 8bc1511113409cd64ce95e1c43e76eed 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 5.5E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TVD_08595 8bc1511113409cd64ce95e1c43e76eed 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 5.5E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 TVD_08595 8bc1511113409cd64ce95e1c43e76eed 163 SMART SM00344 8 118 7.3E-36 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TVD_08595 8bc1511113409cd64ce95e1c43e76eed 163 Gene3D G3DSA:1.10.10.10 9 60 3.0E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_08595 8bc1511113409cd64ce95e1c43e76eed 163 Pfam PF01037 Lrp/AsnC ligand binding domain 74 148 1.5E-22 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TVD_08595 8bc1511113409cd64ce95e1c43e76eed 163 Gene3D G3DSA:3.30.70.920 61 146 4.8E-26 T 11-10-2018 TVD_08595 8bc1511113409cd64ce95e1c43e76eed 163 SUPERFAMILY SSF46785 4 98 2.08E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_08595 8bc1511113409cd64ce95e1c43e76eed 163 SUPERFAMILY SSF54909 68 158 1.07E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel TVD_08595 8bc1511113409cd64ce95e1c43e76eed 163 ProSitePatterns PS00519 AsnC-type HTH domain signature. 26 52 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 Pfam PF02254 TrkA-N domain 4 107 4.9E-26 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 Pfam PF02254 TrkA-N domain 235 351 1.1E-24 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 PRINTS PR00335 TrkA potassium uptake protein signature 61 71 1.9E-21 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 PRINTS PR00335 TrkA potassium uptake protein signature 50 60 1.9E-21 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 PRINTS PR00335 TrkA potassium uptake protein signature 3 17 1.9E-21 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 PRINTS PR00335 TrkA potassium uptake protein signature 20 34 1.9E-21 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 PRINTS PR00335 TrkA potassium uptake protein signature 74 88 1.9E-21 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 Gene3D G3DSA:3.40.50.720 233 367 5.1E-34 T 11-10-2018 TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 Pfam PF02080 TrkA-C domain 156 225 7.9E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 Pfam PF02080 TrkA-C domain 392 452 7.9E-13 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 Gene3D G3DSA:3.30.70.1450 140 232 3.6E-21 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 SUPERFAMILY SSF51735 2 152 1.67E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 SUPERFAMILY SSF116726 379 442 3.92E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 SUPERFAMILY SSF51735 232 377 4.73E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 SUPERFAMILY SSF116726 136 222 4.45E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 Gene3D G3DSA:3.30.70.1450 369 459 1.6E-29 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_01310 607a5c9e0426c82a5d5eff41c99da5a1 459 Gene3D G3DSA:3.40.50.720 3 139 5.3E-44 T 11-10-2018 TVD_09695 f45a13140417b4942447db8f46dc89c7 101 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 88 1.8E-5 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TVD_09695 f45a13140417b4942447db8f46dc89c7 101 Gene3D G3DSA:3.30.2310.20 1 90 1.2E-5 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_07005 7795597cf24c5d91388d120ba6c7e5e3 96 Pfam PF01541 GIY-YIG catalytic domain 6 78 3.4E-14 T 11-10-2018 IPR000305 GIY-YIG endonuclease TVD_07005 7795597cf24c5d91388d120ba6c7e5e3 96 Gene3D G3DSA:3.40.1440.10 2 94 4.1E-20 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TVD_07005 7795597cf24c5d91388d120ba6c7e5e3 96 SUPERFAMILY SSF82771 4 91 1.31E-21 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TVD_07005 7795597cf24c5d91388d120ba6c7e5e3 96 SMART SM00465 4 82 7.3E-4 T 11-10-2018 IPR000305 GIY-YIG endonuclease TVD_06200 3b24ff5b554d98f03dc4ce11974651c4 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 10 392 9.4E-122 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like TVD_06200 3b24ff5b554d98f03dc4ce11974651c4 395 SUPERFAMILY SSF160996 192 341 4.58E-36 T 11-10-2018 TVD_06200 3b24ff5b554d98f03dc4ce11974651c4 395 Pfam PF03486 HI0933-like protein 8 393 1.2E-143 T 11-10-2018 TVD_06200 3b24ff5b554d98f03dc4ce11974651c4 395 Gene3D G3DSA:2.40.30.10 191 340 1.0E-122 T 11-10-2018 TVD_06200 3b24ff5b554d98f03dc4ce11974651c4 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 1.2E-6 T 11-10-2018 TVD_06200 3b24ff5b554d98f03dc4ce11974651c4 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 1.2E-6 T 11-10-2018 TVD_06200 3b24ff5b554d98f03dc4ce11974651c4 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.2E-6 T 11-10-2018 TVD_06200 3b24ff5b554d98f03dc4ce11974651c4 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 2.5E-9 T 11-10-2018 TVD_06200 3b24ff5b554d98f03dc4ce11974651c4 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 2.5E-9 T 11-10-2018 TVD_06200 3b24ff5b554d98f03dc4ce11974651c4 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 2.5E-9 T 11-10-2018 TVD_06200 3b24ff5b554d98f03dc4ce11974651c4 395 Gene3D G3DSA:1.10.8.260 264 323 1.0E-122 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily TVD_06200 3b24ff5b554d98f03dc4ce11974651c4 395 Gene3D G3DSA:3.50.50.60 10 392 1.0E-122 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_06200 3b24ff5b554d98f03dc4ce11974651c4 395 SUPERFAMILY SSF51905 6 394 4.05E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_13150 353a109c75ffc3f5a48c93a6cda3cad5 735 Gene3D G3DSA:1.10.10.160 114 187 5.5E-98 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily TVD_13150 353a109c75ffc3f5a48c93a6cda3cad5 735 Gene3D G3DSA:3.40.50.300 280 639 7.5E-124 T 11-10-2018 TVD_13150 353a109c75ffc3f5a48c93a6cda3cad5 735 SUPERFAMILY SSF52540 5 643 7.28E-176 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_13150 353a109c75ffc3f5a48c93a6cda3cad5 735 Gene3D G3DSA:3.40.50.300 10 272 5.5E-98 T 11-10-2018 TVD_13150 353a109c75ffc3f5a48c93a6cda3cad5 735 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 1.1E-72 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 TVD_13150 353a109c75ffc3f5a48c93a6cda3cad5 735 Pfam PF13361 UvrD-like helicase C-terminal domain 276 619 1.1E-71 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TVD_13150 353a109c75ffc3f5a48c93a6cda3cad5 735 Gene3D G3DSA:1.10.486.10 381 541 7.5E-124 T 11-10-2018 TVD_06545 d7db7bd720abc9af353010c0440b792a 93 Pfam PF12836 Helix-hairpin-helix motif 30 90 3.6E-19 T 11-10-2018 TVD_06545 d7db7bd720abc9af353010c0440b792a 93 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 29 92 1.0E-21 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain TVD_06545 d7db7bd720abc9af353010c0440b792a 93 SUPERFAMILY SSF47781 15 92 2.78E-25 T 11-10-2018 IPR010994 RuvA domain 2-like TVD_06545 d7db7bd720abc9af353010c0440b792a 93 Gene3D G3DSA:1.10.150.280 23 92 3.3E-20 T 11-10-2018 TVD_06545 d7db7bd720abc9af353010c0440b792a 93 SMART SM00278 40 59 0.21 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TVD_06545 d7db7bd720abc9af353010c0440b792a 93 SMART SM00278 70 89 17.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TVD_01975 b24f92e8c2f1c0fb805c572db409aca0 352 SUPERFAMILY SSF53383 9 350 1.6E-70 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_01975 b24f92e8c2f1c0fb805c572db409aca0 352 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 348 7.2E-89 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 TVD_01975 b24f92e8c2f1c0fb805c572db409aca0 352 Gene3D G3DSA:3.40.640.10 42 255 2.7E-110 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_01975 b24f92e8c2f1c0fb805c572db409aca0 352 Gene3D G3DSA:3.90.1150.10 9 345 2.7E-110 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_01975 b24f92e8c2f1c0fb805c572db409aca0 352 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 1 350 53.848 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 TVD_01975 b24f92e8c2f1c0fb805c572db409aca0 352 Pfam PF00155 Aminotransferase class I and II 38 344 2.5E-44 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TVD_05740 2bb8e15c0ee9b0ae025164404ef2f5fa 437 SUPERFAMILY SSF55347 137 302 1.05E-53 T 11-10-2018 TVD_05740 2bb8e15c0ee9b0ae025164404ef2f5fa 437 SUPERFAMILY SSF51735 3 140 1.01E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_05740 2bb8e15c0ee9b0ae025164404ef2f5fa 437 Pfam PF01842 ACT domain 355 421 2.6E-14 T 11-10-2018 IPR002912 ACT domain TVD_05740 2bb8e15c0ee9b0ae025164404ef2f5fa 437 PIRSF PIRSF000098 1 434 6.2E-164 T 11-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 TVD_05740 2bb8e15c0ee9b0ae025164404ef2f5fa 437 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 TVD_05740 2bb8e15c0ee9b0ae025164404ef2f5fa 437 Pfam PF00742 Homoserine dehydrogenase 137 315 2.4E-64 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 TVD_05740 2bb8e15c0ee9b0ae025164404ef2f5fa 437 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 9.1E-17 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 TVD_05740 2bb8e15c0ee9b0ae025164404ef2f5fa 437 Gene3D G3DSA:3.30.70.260 349 421 1.5E-168 T 11-10-2018 TVD_05740 2bb8e15c0ee9b0ae025164404ef2f5fa 437 Gene3D G3DSA:3.30.360.10 136 348 1.5E-168 T 11-10-2018 TVD_05740 2bb8e15c0ee9b0ae025164404ef2f5fa 437 SUPERFAMILY SSF55021 354 420 2.32E-13 T 11-10-2018 TVD_05740 2bb8e15c0ee9b0ae025164404ef2f5fa 437 Gene3D G3DSA:3.40.50.720 4 340 1.5E-168 T 11-10-2018 TVD_09250 2794394f9e9b6f6b32338dc1af04f4c2 321 Gene3D G3DSA:1.20.1530.20 2 311 1.7E-31 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily TVD_09250 2794394f9e9b6f6b32338dc1af04f4c2 321 Pfam PF01758 Sodium Bile acid symporter family 40 218 4.3E-18 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 TVD_06065 08ca8071aa3c94f46857bc0f2d0dfcff 396 Gene3D G3DSA:3.90.220.20 194 347 1.0E-70 T 11-10-2018 TVD_06065 08ca8071aa3c94f46857bc0f2d0dfcff 396 Gene3D G3DSA:1.10.287.1120 138 390 1.0E-70 T 11-10-2018 TVD_06065 08ca8071aa3c94f46857bc0f2d0dfcff 396 SUPERFAMILY SSF116734 183 394 6.05E-26 T 11-10-2018 TVD_06065 08ca8071aa3c94f46857bc0f2d0dfcff 396 Gene3D G3DSA:3.90.220.20 2 394 1.0E-70 T 11-10-2018 TVD_06065 08ca8071aa3c94f46857bc0f2d0dfcff 396 Pfam PF01420 Type I restriction modification DNA specificity domain 52 164 7.5E-11 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TVD_06065 08ca8071aa3c94f46857bc0f2d0dfcff 396 SUPERFAMILY SSF116734 3 191 3.11E-40 T 11-10-2018 TVD_04110 0ead522c6bc05a55c73c43c3cb40f0e1 450 Gene3D G3DSA:3.40.640.10 79 352 2.4E-147 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_04110 0ead522c6bc05a55c73c43c3cb40f0e1 450 Gene3D G3DSA:3.90.1150.10 68 444 2.4E-147 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_04110 0ead522c6bc05a55c73c43c3cb40f0e1 450 SUPERFAMILY SSF53383 1 448 2.12E-110 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_04110 0ead522c6bc05a55c73c43c3cb40f0e1 450 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 449 45.816 T 11-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 TVD_04110 0ead522c6bc05a55c73c43c3cb40f0e1 450 Pfam PF02347 Glycine cleavage system P-protein 3 443 9.6E-124 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 TVD_04110 0ead522c6bc05a55c73c43c3cb40f0e1 450 PIRSF PIRSF006815 1 450 1.9E-163 T 11-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 Pfam PF00563 EAL domain 831 1064 6.2E-64 T 11-10-2018 IPR001633 EAL domain TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 Gene3D G3DSA:3.30.70.270 648 815 5.6E-60 T 11-10-2018 TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 Pfam PF08448 PAS fold 532 642 4.8E-9 T 11-10-2018 IPR013656 PAS fold-4 TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 Pfam PF08448 PAS fold 388 493 6.0E-7 T 11-10-2018 IPR013656 PAS fold-4 TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 Gene3D G3DSA:3.30.450.20 243 358 2.1E-19 T 11-10-2018 TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 SUPERFAMILY SSF55785 387 499 4.03E-18 T 11-10-2018 IPR035965 PAS domain superfamily TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 Gene3D G3DSA:3.20.20.450 816 1068 8.0E-79 T 11-10-2018 IPR035919 EAL domain superfamily TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 SUPERFAMILY SSF141868 831 1064 2.22E-67 T 11-10-2018 IPR035919 EAL domain superfamily TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 SUPERFAMILY SSF55785 248 360 1.01E-16 T 11-10-2018 IPR035965 PAS domain superfamily TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 SUPERFAMILY SSF55073 657 814 4.71E-51 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 SMART SM00267 640 813 8.5E-58 T 11-10-2018 IPR000160 GGDEF domain TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 Gene3D G3DSA:3.30.450.20 515 647 6.7E-16 T 11-10-2018 TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 Gene3D G3DSA:3.30.450.20 369 514 3.6E-20 T 11-10-2018 TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 SMART SM00052 825 1069 8.6E-72 T 11-10-2018 IPR001633 EAL domain TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 Pfam PF08447 PAS fold 268 353 1.0E-17 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 651 812 4.0E-49 T 11-10-2018 IPR000160 GGDEF domain TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 SMART SM00091 376 443 1.9E-4 T 11-10-2018 IPR000014 PAS domain TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 SMART SM00091 243 313 8.8E-6 T 11-10-2018 IPR000014 PAS domain TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 SMART SM00091 524 591 0.011 T 11-10-2018 IPR000014 PAS domain TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 SUPERFAMILY SSF55785 511 639 1.58E-10 T 11-10-2018 IPR035965 PAS domain superfamily TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 Pfam PF00990 Diguanylate cyclase, GGDEF domain 652 808 8.0E-49 T 11-10-2018 IPR000160 GGDEF domain TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 SMART SM00086 448 491 140.0 T 11-10-2018 IPR001610 PAC motif TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 SMART SM00086 319 361 3.7E-4 T 11-10-2018 IPR001610 PAC motif TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 374 498 2.2E-14 T 11-10-2018 IPR000014 PAS domain TVD_03080 aec2f3d6ad5a532c7f968c118b800cb6 1076 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 269 367 3.4E-7 T 11-10-2018 IPR000014 PAS domain TVD_10090 10fa491eeb6b239327ba6503a006132c 99 SMART SM00530 15 70 7.7E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TVD_10090 10fa491eeb6b239327ba6503a006132c 99 SUPERFAMILY SSF47413 11 92 7.78E-28 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TVD_10090 10fa491eeb6b239327ba6503a006132c 99 Pfam PF01381 Helix-turn-helix 16 69 8.7E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TVD_10090 10fa491eeb6b239327ba6503a006132c 99 Gene3D G3DSA:1.10.260.40 1 98 1.1E-33 T 11-10-2018 TVD_10090 10fa491eeb6b239327ba6503a006132c 99 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 7 84 2.8E-29 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 TVD_12630 c3304e563d726bfa544d5ff5519f2ae3 121 Gene3D G3DSA:3.40.50.12740 1 121 9.9E-45 T 11-10-2018 TVD_12630 c3304e563d726bfa544d5ff5519f2ae3 121 Pfam PF00072 Response regulator receiver domain 4 115 9.2E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_12630 c3304e563d726bfa544d5ff5519f2ae3 121 SMART SM00448 2 115 8.2E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_12630 c3304e563d726bfa544d5ff5519f2ae3 121 SUPERFAMILY SSF52172 1 120 3.7E-39 T 11-10-2018 IPR011006 CheY-like superfamily TVD_03970 8e955114cfd0226cfac39b1f2e58256e 266 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 29 245 7.0E-57 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 TVD_03970 8e955114cfd0226cfac39b1f2e58256e 266 Pfam PF13531 Bacterial extracellular solute-binding protein 24 246 2.3E-48 T 11-10-2018 TVD_03970 8e955114cfd0226cfac39b1f2e58256e 266 Gene3D G3DSA:3.40.190.10 103 208 1.2E-66 T 11-10-2018 TVD_03970 8e955114cfd0226cfac39b1f2e58256e 266 Gene3D G3DSA:3.40.190.10 28 246 1.2E-66 T 11-10-2018 TVD_03970 8e955114cfd0226cfac39b1f2e58256e 266 SUPERFAMILY SSF53850 23 249 1.96E-54 T 11-10-2018 TVD_03970 8e955114cfd0226cfac39b1f2e58256e 266 PIRSF PIRSF004846 1 250 7.8E-63 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 TVD_00660 9ce6c3c81c007a75defb03349f21c095 648 Pfam PF05127 Helicase 159 312 1.8E-35 T 11-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 TVD_00660 9ce6c3c81c007a75defb03349f21c095 648 SUPERFAMILY SSF52540 125 256 1.54E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_00660 9ce6c3c81c007a75defb03349f21c095 648 Gene3D G3DSA:3.40.50.12320 155 302 4.1E-33 T 11-10-2018 TVD_00660 9ce6c3c81c007a75defb03349f21c095 648 SMART SM00382 153 292 7.2E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_00660 9ce6c3c81c007a75defb03349f21c095 648 SUPERFAMILY SSF55729 336 489 1.05E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_00660 9ce6c3c81c007a75defb03349f21c095 648 Gene3D G3DSA:3.40.50.11040 1 120 9.4E-15 T 11-10-2018 TVD_00660 9ce6c3c81c007a75defb03349f21c095 648 Pfam PF17176 tRNA-binding domain 567 645 5.0E-8 T 11-10-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain TVD_00660 9ce6c3c81c007a75defb03349f21c095 648 Gene3D G3DSA:3.40.630.30 307 508 2.1E-53 T 11-10-2018 TVD_00660 9ce6c3c81c007a75defb03349f21c095 648 Pfam PF13718 GNAT acetyltransferase 2 343 457 3.7E-14 T 11-10-2018 IPR000182 GNAT domain TVD_01130 330d5bba63c13ba59684a6975046bac0 292 SUPERFAMILY SSF53633 5 291 1.31E-93 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TVD_01130 330d5bba63c13ba59684a6975046bac0 292 PIRSF PIRSF000728 11 292 1.1E-107 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TVD_01130 330d5bba63c13ba59684a6975046bac0 292 Hamap MF_00082 Acetylglutamate kinase [argB]. 25 285 50.226 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TVD_01130 330d5bba63c13ba59684a6975046bac0 292 TIGRFAM TIGR00761 argB: acetylglutamate kinase 27 267 7.4E-78 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TVD_01130 330d5bba63c13ba59684a6975046bac0 292 Pfam PF00696 Amino acid kinase family 26 268 6.1E-47 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TVD_01130 330d5bba63c13ba59684a6975046bac0 292 PRINTS PR00474 Glutamate 5-kinase family signature 192 219 1.6E-7 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TVD_01130 330d5bba63c13ba59684a6975046bac0 292 PRINTS PR00474 Glutamate 5-kinase family signature 57 71 1.6E-7 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TVD_01130 330d5bba63c13ba59684a6975046bac0 292 PRINTS PR00474 Glutamate 5-kinase family signature 242 262 1.6E-7 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 TVD_01130 330d5bba63c13ba59684a6975046bac0 292 Gene3D G3DSA:3.40.1160.10 2 292 1.6E-100 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TVD_11080 c36312b9efb55e8e8e0503ae6524bd8a 480 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 369 390 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 TVD_11080 c36312b9efb55e8e8e0503ae6524bd8a 480 Pfam PF00639 PPIC-type PPIASE domain 229 320 2.0E-18 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 TVD_11080 c36312b9efb55e8e8e0503ae6524bd8a 480 Gene3D G3DSA:1.10.4030.10 72 198 3.2E-34 T 11-10-2018 TVD_11080 c36312b9efb55e8e8e0503ae6524bd8a 480 Gene3D G3DSA:3.10.50.40 329 434 1.9E-79 T 11-10-2018 TVD_11080 c36312b9efb55e8e8e0503ae6524bd8a 480 Hamap MF_01183 Chaperone SurA [surA]. 19 476 33.027 T 11-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 TVD_11080 c36312b9efb55e8e8e0503ae6524bd8a 480 Pfam PF13616 PPIC-type PPIASE domain 330 431 7.0E-31 T 11-10-2018 TVD_11080 c36312b9efb55e8e8e0503ae6524bd8a 480 Pfam PF09312 SurA N-terminal domain 76 192 3.0E-38 T 11-10-2018 IPR015391 SurA N-terminal TVD_11080 c36312b9efb55e8e8e0503ae6524bd8a 480 Gene3D G3DSA:3.10.50.40 225 436 1.9E-79 T 11-10-2018 TVD_11080 c36312b9efb55e8e8e0503ae6524bd8a 480 SUPERFAMILY SSF109998 76 252 8.83E-39 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily TVD_11080 c36312b9efb55e8e8e0503ae6524bd8a 480 SUPERFAMILY SSF54534 333 433 6.02E-33 T 11-10-2018 TVD_11080 c36312b9efb55e8e8e0503ae6524bd8a 480 SUPERFAMILY SSF54534 224 326 6.34E-25 T 11-10-2018 TVD_12160 e068ecbcbb6f2a5cae3aba182812d9ba 278 Gene3D G3DSA:2.40.10.350 155 232 3.0E-30 T 11-10-2018 TVD_12160 e068ecbcbb6f2a5cae3aba182812d9ba 278 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 23 248 6.1E-51 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TVD_12160 e068ecbcbb6f2a5cae3aba182812d9ba 278 Gene3D G3DSA:2.40.10.340 96 242 3.0E-30 T 11-10-2018 TVD_12160 e068ecbcbb6f2a5cae3aba182812d9ba 278 PIRSF PIRSF038471 1 256 5.4E-70 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TVD_12160 e068ecbcbb6f2a5cae3aba182812d9ba 278 Pfam PF04085 rod shape-determining protein MreC 101 244 4.3E-34 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 TVD_09650 b4e85a6b9e3784029fb4d6dfa253f8a4 406 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 26 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_09650 b4e85a6b9e3784029fb4d6dfa253f8a4 406 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 8 193 1.1E-57 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TVD_09650 b4e85a6b9e3784029fb4d6dfa253f8a4 406 Gene3D G3DSA:1.10.240.10 265 370 6.2E-38 T 11-10-2018 TVD_09650 b4e85a6b9e3784029fb4d6dfa253f8a4 406 Gene3D G3DSA:3.40.50.620 8 232 1.2E-75 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_09650 b4e85a6b9e3784029fb4d6dfa253f8a4 406 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 4.8E-20 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TVD_09650 b4e85a6b9e3784029fb4d6dfa253f8a4 406 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 21 37 4.8E-20 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TVD_09650 b4e85a6b9e3784029fb4d6dfa253f8a4 406 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 72 91 4.8E-20 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 TVD_09650 b4e85a6b9e3784029fb4d6dfa253f8a4 406 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 8 403 34.831 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 TVD_09650 b4e85a6b9e3784029fb4d6dfa253f8a4 406 SUPERFAMILY SSF52374 10 402 8.56E-88 T 11-10-2018 TVD_09650 b4e85a6b9e3784029fb4d6dfa253f8a4 406 Pfam PF00579 tRNA synthetases class I (W and Y) 249 357 3.2E-11 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_09650 b4e85a6b9e3784029fb4d6dfa253f8a4 406 Pfam PF00579 tRNA synthetases class I (W and Y) 8 175 2.9E-51 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_02190 3456f7efb61537c18769c63aedaeb5d1 320 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 211 305 1.3E-28 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_02190 3456f7efb61537c18769c63aedaeb5d1 320 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 31 307 3.1E-52 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_02190 3456f7efb61537c18769c63aedaeb5d1 320 Gene3D G3DSA:3.90.78.10 224 317 1.7E-31 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_02190 3456f7efb61537c18769c63aedaeb5d1 320 Gene3D G3DSA:3.30.465.10 100 223 1.6E-29 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TVD_02190 3456f7efb61537c18769c63aedaeb5d1 320 Pfam PF01565 FAD binding domain 43 172 1.2E-18 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TVD_02190 3456f7efb61537c18769c63aedaeb5d1 320 Gene3D G3DSA:3.30.43.10 14 94 4.2E-21 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 TVD_02190 3456f7efb61537c18769c63aedaeb5d1 320 SUPERFAMILY SSF56194 204 307 1.96E-33 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_02190 3456f7efb61537c18769c63aedaeb5d1 320 SUPERFAMILY SSF56176 18 199 1.55E-34 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TVD_02190 3456f7efb61537c18769c63aedaeb5d1 320 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 320 85.885 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_07030 b1b4bf914ff8d95c3b7232fb8078172a 466 Pfam PF00700 Bacterial flagellin C-terminal helical region 382 465 7.5E-26 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TVD_07030 b1b4bf914ff8d95c3b7232fb8078172a 466 Gene3D G3DSA:1.20.58.1830 5 465 3.4E-131 T 11-10-2018 TVD_07030 b1b4bf914ff8d95c3b7232fb8078172a 466 PRINTS PR00207 Flagellin signature 76 95 1.8E-26 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TVD_07030 b1b4bf914ff8d95c3b7232fb8078172a 466 PRINTS PR00207 Flagellin signature 111 134 1.8E-26 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TVD_07030 b1b4bf914ff8d95c3b7232fb8078172a 466 PRINTS PR00207 Flagellin signature 37 54 1.8E-26 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TVD_07030 b1b4bf914ff8d95c3b7232fb8078172a 466 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.9E-46 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TVD_07030 b1b4bf914ff8d95c3b7232fb8078172a 466 Gene3D G3DSA:1.20.1330.10 45 425 3.4E-131 T 11-10-2018 TVD_07030 b1b4bf914ff8d95c3b7232fb8078172a 466 Gene3D G3DSA:2.30.220.10 188 271 3.4E-131 T 11-10-2018 TVD_07030 b1b4bf914ff8d95c3b7232fb8078172a 466 Gene3D G3DSA:2.170.280.10 178 373 3.4E-131 T 11-10-2018 TVD_07030 b1b4bf914ff8d95c3b7232fb8078172a 466 Pfam PF07196 Flagellin hook IN motif 255 301 1.3E-6 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 TVD_07030 b1b4bf914ff8d95c3b7232fb8078172a 466 SUPERFAMILY SSF64518 1 466 5.89E-101 T 11-10-2018 TVD_13580 e6836936d1af1292304dce5b651e67be 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 4.8E-110 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13580 e6836936d1af1292304dce5b651e67be 286 Gene3D G3DSA:3.40.1380.10 61 205 1.7E-108 T 11-10-2018 TVD_13580 e6836936d1af1292304dce5b651e67be 286 SUPERFAMILY SSF52943 2 286 4.71E-95 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13580 e6836936d1af1292304dce5b651e67be 286 Gene3D G3DSA:1.10.287.80 6 282 1.7E-108 T 11-10-2018 TVD_13580 e6836936d1af1292304dce5b651e67be 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 36.16 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13580 e6836936d1af1292304dce5b651e67be 286 Pfam PF00231 ATP synthase 4 285 5.5E-96 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13580 e6836936d1af1292304dce5b651e67be 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13580 e6836936d1af1292304dce5b651e67be 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 3.3E-35 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13580 e6836936d1af1292304dce5b651e67be 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 3.3E-35 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13580 e6836936d1af1292304dce5b651e67be 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 3.3E-35 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13580 e6836936d1af1292304dce5b651e67be 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 3.3E-35 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_11575 1fc43e11bf18be79f0de68280da5862a 241 Pfam PF00535 Glycosyl transferase family 2 7 158 6.1E-23 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TVD_11575 1fc43e11bf18be79f0de68280da5862a 241 SUPERFAMILY SSF53448 3 204 2.22E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_11575 1fc43e11bf18be79f0de68280da5862a 241 Gene3D G3DSA:3.90.550.10 2 231 1.2E-41 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_12900 3b659265bebf5c048004058cf3653efe 290 Gene3D G3DSA:1.10.760.10 78 155 8.7E-26 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_12900 3b659265bebf5c048004058cf3653efe 290 PRINTS PR00607 Class IE cytochrome C signature 87 98 2.4E-10 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 TVD_12900 3b659265bebf5c048004058cf3653efe 290 PRINTS PR00607 Class IE cytochrome C signature 98 108 2.4E-10 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 TVD_12900 3b659265bebf5c048004058cf3653efe 290 PRINTS PR00607 Class IE cytochrome C signature 127 139 2.4E-10 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 TVD_12900 3b659265bebf5c048004058cf3653efe 290 PRINTS PR00607 Class IE cytochrome C signature 142 153 2.4E-10 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 TVD_12900 3b659265bebf5c048004058cf3653efe 290 SUPERFAMILY SSF46626 192 289 2.91E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_12900 3b659265bebf5c048004058cf3653efe 290 Gene3D G3DSA:1.10.760.10 208 289 8.5E-24 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_12900 3b659265bebf5c048004058cf3653efe 290 SUPERFAMILY SSF46626 79 158 3.69E-15 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_12900 3b659265bebf5c048004058cf3653efe 290 Pfam PF00034 Cytochrome c 211 287 3.7E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_12900 3b659265bebf5c048004058cf3653efe 290 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 82 152 1.1E-14 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_07155 885b936840d4bb18cdb1c6177c8a773f 280 SUPERFAMILY SSF51569 2 270 3.02E-108 T 11-10-2018 TVD_07155 885b936840d4bb18cdb1c6177c8a773f 280 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 268 6.4E-125 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TVD_07155 885b936840d4bb18cdb1c6177c8a773f 280 Gene3D G3DSA:3.20.20.70 3 274 2.8E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_07155 885b936840d4bb18cdb1c6177c8a773f 280 Pfam PF00793 DAHP synthetase I family 8 265 4.4E-70 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TVD_07155 885b936840d4bb18cdb1c6177c8a773f 280 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 270 52.254 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 SMART SM00865 208 326 3.7E-55 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 SUPERFAMILY SSF52490 14 209 2.22E-70 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 PRINTS PR00423 Cell division protein FtsZ signature 213 234 5.8E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 PRINTS PR00423 Cell division protein FtsZ signature 127 148 5.8E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 PRINTS PR00423 Cell division protein FtsZ signature 190 212 5.8E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 PRINTS PR00423 Cell division protein FtsZ signature 99 119 5.8E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 358 37.822 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 SUPERFAMILY SSF55307 205 320 3.89E-42 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 SMART SM00864 14 206 3.1E-111 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 Pfam PF12327 FtsZ family, C-terminal domain 223 317 1.7E-35 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 ProSitePatterns PS01135 FtsZ protein signature 2. 98 119 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 Gene3D G3DSA:3.30.1330.20 222 332 3.4E-35 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 Gene3D G3DSA:3.40.50.1440 5 221 2.9E-80 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 173 5.6E-40 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 ProSitePatterns PS01134 FtsZ protein signature 1. 45 79 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 TVD_02210 f7e6f1444daa7301ac74f78f8223575c 385 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 325 4.0E-129 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 TVD_01695 a86f2b848e499f64b8ca0d667bd58fe7 639 Gene3D G3DSA:3.30.1370.120 190 255 7.0E-15 T 11-10-2018 IPR038591 NolW-like superfamily TVD_01695 a86f2b848e499f64b8ca0d667bd58fe7 639 Gene3D G3DSA:3.30.1370.120 258 332 6.4E-12 T 11-10-2018 IPR038591 NolW-like superfamily TVD_01695 a86f2b848e499f64b8ca0d667bd58fe7 639 Pfam PF00263 Bacterial type II and III secretion system protein 422 583 1.4E-49 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 TVD_01695 a86f2b848e499f64b8ca0d667bd58fe7 639 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 28 592 6.4E-156 T 11-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 TVD_01695 a86f2b848e499f64b8ca0d667bd58fe7 639 Pfam PF03958 Bacterial type II/III secretion system short domain 128 186 7.4E-8 T 11-10-2018 IPR005644 NolW-like TVD_01695 a86f2b848e499f64b8ca0d667bd58fe7 639 Pfam PF03958 Bacterial type II/III secretion system short domain 262 334 6.2E-11 T 11-10-2018 IPR005644 NolW-like TVD_01695 a86f2b848e499f64b8ca0d667bd58fe7 639 Pfam PF03958 Bacterial type II/III secretion system short domain 192 255 7.3E-11 T 11-10-2018 IPR005644 NolW-like TVD_01695 a86f2b848e499f64b8ca0d667bd58fe7 639 Gene3D G3DSA:3.30.1370.120 19 185 2.2E-49 T 11-10-2018 IPR038591 NolW-like superfamily TVD_01695 a86f2b848e499f64b8ca0d667bd58fe7 639 PRINTS PR00811 Bacterial general secretion pathway protein D signature 417 441 1.0E-29 T 11-10-2018 IPR001775 GspD/PilQ family TVD_01695 a86f2b848e499f64b8ca0d667bd58fe7 639 PRINTS PR00811 Bacterial general secretion pathway protein D signature 547 565 1.0E-29 T 11-10-2018 IPR001775 GspD/PilQ family TVD_01695 a86f2b848e499f64b8ca0d667bd58fe7 639 PRINTS PR00811 Bacterial general secretion pathway protein D signature 334 344 1.0E-29 T 11-10-2018 IPR001775 GspD/PilQ family TVD_01695 a86f2b848e499f64b8ca0d667bd58fe7 639 PRINTS PR00811 Bacterial general secretion pathway protein D signature 570 584 1.0E-29 T 11-10-2018 IPR001775 GspD/PilQ family TVD_01695 a86f2b848e499f64b8ca0d667bd58fe7 639 PRINTS PR00811 Bacterial general secretion pathway protein D signature 452 462 1.0E-29 T 11-10-2018 IPR001775 GspD/PilQ family TVD_12165 adc121db6f1ae1c43e569d7a445014c7 163 PIRSF PIRSF018472 3 161 2.3E-45 T 11-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type TVD_12165 adc121db6f1ae1c43e569d7a445014c7 163 Pfam PF04093 rod shape-determining protein MreD 9 152 3.9E-22 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 TVD_12165 adc121db6f1ae1c43e569d7a445014c7 163 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 152 3.8E-32 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 TVD_08625 3054b2121a895ee540fa1ba5e5f0c11b 222 Pfam PF13192 Thioredoxin domain 1 75 2.0E-10 T 11-10-2018 IPR012336 Thioredoxin-like fold TVD_08625 3054b2121a895ee540fa1ba5e5f0c11b 222 SUPERFAMILY SSF52833 2 71 2.0E-10 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_08625 3054b2121a895ee540fa1ba5e5f0c11b 222 Gene3D G3DSA:3.40.30.10 1 81 5.7E-13 T 11-10-2018 TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 SUPERFAMILY SSF52172 1 189 2.28E-45 T 11-10-2018 IPR011006 CheY-like superfamily TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 Gene3D G3DSA:1.10.8.60 315 394 1.7E-23 T 11-10-2018 TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 SMART SM00382 164 311 8.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 Pfam PF00072 Response regulator receiver domain 7 115 1.9E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 SUPERFAMILY SSF46689 358 449 2.06E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 Gene3D G3DSA:3.40.50.300 135 314 3.1E-65 T 11-10-2018 TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 Pfam PF00158 Sigma-54 interaction domain 145 310 5.8E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 413 430 1.1E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 430 450 1.1E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 Gene3D G3DSA:3.40.50.2300 2 134 1.4E-37 T 11-10-2018 TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 SMART SM00448 4 115 5.4E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 Pfam PF02954 Bacterial regulatory protein, Fis family 406 447 1.7E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 Gene3D G3DSA:1.10.10.60 405 449 1.4E-14 T 11-10-2018 TVD_05360 a173e41be830dc7584f6cd32ba911cdc 450 SUPERFAMILY SSF52540 144 388 1.43E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_12100 f90a85cbac29c98c8b39f5549e49d1d9 581 SUPERFAMILY SSF48452 64 266 1.23E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_12100 f90a85cbac29c98c8b39f5549e49d1d9 581 Gene3D G3DSA:1.25.40.10 396 579 1.3E-31 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_12100 f90a85cbac29c98c8b39f5549e49d1d9 581 Pfam PF14559 Tetratricopeptide repeat 514 576 1.3E-6 T 11-10-2018 TVD_12100 f90a85cbac29c98c8b39f5549e49d1d9 581 Pfam PF13432 Tetratricopeptide repeat 233 273 0.011 T 11-10-2018 TVD_12100 f90a85cbac29c98c8b39f5549e49d1d9 581 Pfam PF13432 Tetratricopeptide repeat 404 466 1.8E-8 T 11-10-2018 TVD_12100 f90a85cbac29c98c8b39f5549e49d1d9 581 SUPERFAMILY SSF48452 402 569 8.35E-30 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_12100 f90a85cbac29c98c8b39f5549e49d1d9 581 SUPERFAMILY SSF48452 212 357 6.33E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_12100 f90a85cbac29c98c8b39f5549e49d1d9 581 Gene3D G3DSA:1.25.40.10 48 376 3.8E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_12100 f90a85cbac29c98c8b39f5549e49d1d9 581 SMART SM00028 536 569 5.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_12100 f90a85cbac29c98c8b39f5549e49d1d9 581 SMART SM00028 434 467 0.037 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_12100 f90a85cbac29c98c8b39f5549e49d1d9 581 SMART SM00028 400 433 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_12100 f90a85cbac29c98c8b39f5549e49d1d9 581 SMART SM00028 468 502 85.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_05470 601d1d8df1133703bb69b5be82bbf40d 305 SUPERFAMILY SSF46785 6 115 5.95E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_05470 601d1d8df1133703bb69b5be82bbf40d 305 Gene3D G3DSA:3.40.190.290 95 296 3.3E-38 T 11-10-2018 TVD_05470 601d1d8df1133703bb69b5be82bbf40d 305 Gene3D G3DSA:1.10.10.10 6 94 1.4E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_05470 601d1d8df1133703bb69b5be82bbf40d 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.5E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_05470 601d1d8df1133703bb69b5be82bbf40d 305 Pfam PF03466 LysR substrate binding domain 93 292 8.5E-42 T 11-10-2018 IPR005119 LysR, substrate-binding TVD_05470 601d1d8df1133703bb69b5be82bbf40d 305 SUPERFAMILY SSF53850 94 298 4.68E-40 T 11-10-2018 TVD_05470 601d1d8df1133703bb69b5be82bbf40d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_05470 601d1d8df1133703bb69b5be82bbf40d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_05470 601d1d8df1133703bb69b5be82bbf40d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_06215 4ea8086021f440b5bd5eb6c7c760246b 358 PIRSF PIRSF028774 8 358 2.3E-133 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 TVD_06215 4ea8086021f440b5bd5eb6c7c760246b 358 Gene3D G3DSA:3.30.2300.20 86 179 1.4E-18 T 11-10-2018 TVD_06215 4ea8086021f440b5bd5eb6c7c760246b 358 Gene3D G3DSA:3.30.70.2810 8 84 1.6E-21 T 11-10-2018 TVD_06215 4ea8086021f440b5bd5eb6c7c760246b 358 Gene3D G3DSA:3.40.50.150 181 357 4.8E-54 T 11-10-2018 TVD_06215 4ea8086021f440b5bd5eb6c7c760246b 358 Pfam PF01728 FtsJ-like methyltransferase 190 266 1.3E-7 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 TVD_06215 4ea8086021f440b5bd5eb6c7c760246b 358 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 8 358 72.993 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 TVD_06215 4ea8086021f440b5bd5eb6c7c760246b 358 SUPERFAMILY SSF53335 189 299 2.11E-13 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 Gene3D G3DSA:2.20.28.20 142 176 3.0E-156 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 SUPERFAMILY SSF57770 142 176 1.31E-11 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 Gene3D G3DSA:1.10.730.10 379 544 1.2E-29 T 11-10-2018 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 534 1.5E-178 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 2.9E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 2.9E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 2.9E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 2.9E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 290 305 2.9E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 2.9E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 Gene3D G3DSA:2.40.50.140 569 679 2.5E-33 T 11-10-2018 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 SUPERFAMILY SSF50249 573 678 7.83E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 SUPERFAMILY SSF47323 389 545 2.24E-39 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 544 40.551 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 Gene3D G3DSA:3.40.50.620 8 378 3.0E-156 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 Pfam PF09334 tRNA synthetases class I (M) 8 395 9.8E-157 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 Pfam PF01588 Putative tRNA binding domain 584 676 2.0E-24 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 540 679 6.8E-45 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TVD_04620 e5008bb53d6a92ea0fde003947c34488 679 SUPERFAMILY SSF52374 5 386 1.5E-106 T 11-10-2018 TVD_06380 5740f8df40a1d54aa9414331a5283c23 161 Gene3D G3DSA:2.30.30.40 19 144 1.3E-44 T 11-10-2018 TVD_06380 5740f8df40a1d54aa9414331a5283c23 161 Gene3D G3DSA:2.40.50.180 36 145 1.3E-44 T 11-10-2018 TVD_06380 5740f8df40a1d54aa9414331a5283c23 161 SUPERFAMILY SSF50341 14 156 8.5E-42 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TVD_06380 5740f8df40a1d54aa9414331a5283c23 161 Pfam PF01584 CheW-like domain 18 153 7.4E-40 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_06380 5740f8df40a1d54aa9414331a5283c23 161 SMART SM00260 13 150 1.0E-42 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_03720 2f5e50cb402b0b1bc1f1aec45162fb2d 274 Pfam PF00227 Proteasome subunit 4 195 9.3E-7 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 TVD_03720 2f5e50cb402b0b1bc1f1aec45162fb2d 274 PIRSF PIRSF009120 1 250 1.3E-99 T 11-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 TVD_03720 2f5e50cb402b0b1bc1f1aec45162fb2d 274 SUPERFAMILY SSF56235 2 241 2.13E-31 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_03720 2f5e50cb402b0b1bc1f1aec45162fb2d 274 Gene3D G3DSA:3.60.20.10 2 208 6.0E-25 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_08825 a893113b8744e6224b0ec5e6a386f082 178 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 36 169 5.5E-28 T 11-10-2018 IPR023473 AMMECR1 TVD_08825 a893113b8744e6224b0ec5e6a386f082 178 SUPERFAMILY SSF143447 2 173 9.81E-51 T 11-10-2018 IPR036071 AMMECR1 domain superfamily TVD_08825 a893113b8744e6224b0ec5e6a386f082 178 Gene3D G3DSA:3.30.700.20 1 97 1.5E-44 T 11-10-2018 IPR027485 AMMECR1, N-terminal TVD_08825 a893113b8744e6224b0ec5e6a386f082 178 Pfam PF01871 AMMECR1 3 171 5.0E-42 T 11-10-2018 IPR002733 AMMECR1 domain TVD_08825 a893113b8744e6224b0ec5e6a386f082 178 Gene3D G3DSA:3.30.1490.150 98 170 1.5E-44 T 11-10-2018 TVD_08825 a893113b8744e6224b0ec5e6a386f082 178 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 1 170 1.1E-54 T 11-10-2018 IPR027623 AmmeMemoRadiSam system protein A TVD_07990 d28ee282fe7f5f8fdaed6726392ebf16 328 SUPERFAMILY SSF56281 36 298 1.22E-42 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_07990 d28ee282fe7f5f8fdaed6726392ebf16 328 Pfam PF00753 Metallo-beta-lactamase superfamily 69 256 7.8E-16 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_07990 d28ee282fe7f5f8fdaed6726392ebf16 328 SMART SM00849 69 256 4.0E-11 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_07990 d28ee282fe7f5f8fdaed6726392ebf16 328 Gene3D G3DSA:3.60.15.10 32 281 1.7E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_03140 409fb9753e514e6a915f5a0d9455d788 216 Hamap MF_00328 Guanylate kinase [gmk]. 8 191 34.98 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 TVD_03140 409fb9753e514e6a915f5a0d9455d788 216 SUPERFAMILY SSF52540 7 194 1.0E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_03140 409fb9753e514e6a915f5a0d9455d788 216 ProSitePatterns PS00856 Guanylate kinase-like signature. 44 61 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 TVD_03140 409fb9753e514e6a915f5a0d9455d788 216 Gene3D G3DSA:3.40.50.300 14 186 6.1E-65 T 11-10-2018 TVD_03140 409fb9753e514e6a915f5a0d9455d788 216 Pfam PF00625 Guanylate kinase 11 188 6.3E-53 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit TVD_03140 409fb9753e514e6a915f5a0d9455d788 216 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 10 188 4.9E-71 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 TVD_03140 409fb9753e514e6a915f5a0d9455d788 216 Gene3D G3DSA:3.30.63.10 41 100 6.1E-65 T 11-10-2018 TVD_03140 409fb9753e514e6a915f5a0d9455d788 216 SMART SM00072 9 191 1.7E-65 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit TVD_08350 65b8ca4ae5272ea0f019712830cd4c32 324 Gene3D G3DSA:3.40.190.10 125 267 2.5E-103 T 11-10-2018 TVD_08350 65b8ca4ae5272ea0f019712830cd4c32 324 Pfam PF12849 PBP superfamily domain 39 295 1.9E-31 T 11-10-2018 IPR024370 PBP domain TVD_08350 65b8ca4ae5272ea0f019712830cd4c32 324 SUPERFAMILY SSF53850 42 322 9.75E-71 T 11-10-2018 TVD_08350 65b8ca4ae5272ea0f019712830cd4c32 324 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 4 309 6.2E-77 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 TVD_08350 65b8ca4ae5272ea0f019712830cd4c32 324 Gene3D G3DSA:3.40.190.10 40 311 2.5E-103 T 11-10-2018 TVD_00885 605400d6e46d00932bfd17b3a031118a 244 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 15 84 1.4E-16 T 11-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 TVD_00885 605400d6e46d00932bfd17b3a031118a 244 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 4 240 37.395 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 TVD_00885 605400d6e46d00932bfd17b3a031118a 244 SUPERFAMILY SSF55729 77 242 1.75E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_00885 605400d6e46d00932bfd17b3a031118a 244 PIRSF PIRSF037208 1 244 2.7E-78 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 TVD_00885 605400d6e46d00932bfd17b3a031118a 244 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 114 232 3.3E-33 T 11-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 TVD_10405 6472b7c40ad1e5d5d3d9d950e737fa01 224 TIGRFAM TIGR02796 tolQ: protein TolQ 2 209 1.3E-84 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 TVD_10405 6472b7c40ad1e5d5d3d9d950e737fa01 224 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 1 214 41.116 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 TVD_10405 6472b7c40ad1e5d5d3d9d950e737fa01 224 Pfam PF01618 MotA/TolQ/ExbB proton channel family 72 197 3.8E-42 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TVD_08010 08d71da88d193bd91320cf0813ea6698 294 SUPERFAMILY SSF51658 27 239 2.09E-11 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily TVD_08010 08d71da88d193bd91320cf0813ea6698 294 Pfam PF05114 Protein of unknown function (DUF692) 16 280 6.3E-98 T 11-10-2018 IPR007801 Uncharacterised protein family UPF0276 TVD_08010 08d71da88d193bd91320cf0813ea6698 294 Hamap MF_00697 UPF0276 protein . 17 288 44.455 T 11-10-2018 IPR007801 Uncharacterised protein family UPF0276 TVD_08010 08d71da88d193bd91320cf0813ea6698 294 Gene3D G3DSA:3.20.20.150 13 290 4.1E-83 T 11-10-2018 TVD_06305 b13f608b99d70a5e2305c000e0da9be5 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.0E-30 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TVD_06305 b13f608b99d70a5e2305c000e0da9be5 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 83 4.4E-31 T 11-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 TVD_06305 b13f608b99d70a5e2305c000e0da9be5 89 PIRSF PIRSF004669 1 89 1.1E-33 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TVD_06305 b13f608b99d70a5e2305c000e0da9be5 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.6E-23 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TVD_06305 b13f608b99d70a5e2305c000e0da9be5 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.6E-23 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TVD_06305 b13f608b99d70a5e2305c000e0da9be5 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.6E-23 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TVD_03010 9c69e8203c9c59fdfad904c504ee3fb1 547 Gene3D G3DSA:3.40.50.10490 90 289 8.8E-205 T 11-10-2018 TVD_03010 9c69e8203c9c59fdfad904c504ee3fb1 547 Gene3D G3DSA:1.10.1390.10 502 542 5.6E-14 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_03010 9c69e8203c9c59fdfad904c504ee3fb1 547 Pfam PF00342 Phosphoglucose isomerase 41 534 2.2E-189 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_03010 9c69e8203c9c59fdfad904c504ee3fb1 547 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 492 509 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_03010 9c69e8203c9c59fdfad904c504ee3fb1 547 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 35 519 39.206 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_03010 9c69e8203c9c59fdfad904c504ee3fb1 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 478 492 5.2E-49 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_03010 9c69e8203c9c59fdfad904c504ee3fb1 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 333 354 5.2E-49 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_03010 9c69e8203c9c59fdfad904c504ee3fb1 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 139 158 5.2E-49 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_03010 9c69e8203c9c59fdfad904c504ee3fb1 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 492 505 5.2E-49 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_03010 9c69e8203c9c59fdfad904c504ee3fb1 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 256 274 5.2E-49 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_03010 9c69e8203c9c59fdfad904c504ee3fb1 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 460 478 5.2E-49 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_03010 9c69e8203c9c59fdfad904c504ee3fb1 547 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 260 273 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_03010 9c69e8203c9c59fdfad904c504ee3fb1 547 SUPERFAMILY SSF53697 13 540 7.23E-190 T 11-10-2018 TVD_03010 9c69e8203c9c59fdfad904c504ee3fb1 547 Gene3D G3DSA:3.40.50.10490 17 501 8.8E-205 T 11-10-2018 TVD_13325 5ae282736c39089337f2b6e2786a6634 362 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 3 359 1.3E-138 T 11-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 TVD_13325 5ae282736c39089337f2b6e2786a6634 362 Pfam PF01924 Hydrogenase formation hypA family 16 359 6.0E-141 T 11-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 TVD_13325 5ae282736c39089337f2b6e2786a6634 362 Gene3D G3DSA:1.10.10.2140 311 360 9.7E-21 T 11-10-2018 TVD_13325 5ae282736c39089337f2b6e2786a6634 362 Gene3D G3DSA:3.40.50.11750 17 256 2.6E-104 T 11-10-2018 TVD_13325 5ae282736c39089337f2b6e2786a6634 362 PIRSF PIRSF005622 1 362 1.9E-143 T 11-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 TVD_13325 5ae282736c39089337f2b6e2786a6634 362 Gene3D G3DSA:3.40.50.11740 59 296 2.6E-104 T 11-10-2018 TVD_05545 8b75db3e83512c2faad4eb5bce61c264 502 SUPERFAMILY SSF53271 252 476 7.74E-71 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TVD_05545 8b75db3e83512c2faad4eb5bce61c264 502 Gene3D G3DSA:3.40.50.2020 279 443 2.8E-148 T 11-10-2018 TVD_05545 8b75db3e83512c2faad4eb5bce61c264 502 Pfam PF00156 Phosphoribosyl transferase domain 292 395 2.7E-8 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TVD_05545 8b75db3e83512c2faad4eb5bce61c264 502 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.371 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 TVD_05545 8b75db3e83512c2faad4eb5bce61c264 502 SUPERFAMILY SSF56235 2 259 1.2E-72 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_05545 8b75db3e83512c2faad4eb5bce61c264 502 PIRSF PIRSF000485 1 479 2.4E-162 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 TVD_05545 8b75db3e83512c2faad4eb5bce61c264 502 Gene3D G3DSA:3.60.20.10 2 414 2.8E-148 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_05545 8b75db3e83512c2faad4eb5bce61c264 502 Pfam PF13522 Glutamine amidotransferase domain 62 210 2.3E-17 T 11-10-2018 TVD_05545 8b75db3e83512c2faad4eb5bce61c264 502 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 2.0E-157 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 TVD_09515 59eee7b74a7017c22ac97845ac6ac47c 85 Gene3D G3DSA:3.30.1070.10 1 82 1.1E-29 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 TVD_09515 59eee7b74a7017c22ac97845ac6ac47c 85 SUPERFAMILY SSF55229 33 83 1.83E-15 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 TVD_09515 59eee7b74a7017c22ac97845ac6ac47c 85 Pfam PF03776 Septum formation topological specificity factor MinE 14 81 1.2E-25 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 TVD_09515 59eee7b74a7017c22ac97845ac6ac47c 85 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 5.0E-30 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 TVD_09515 59eee7b74a7017c22ac97845ac6ac47c 85 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 83 18.314 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 TVD_13560 b622d6eb25116a6bace0ca7882311f17 78 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.9E-10 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13560 b622d6eb25116a6bace0ca7882311f17 78 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.9E-10 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13560 b622d6eb25116a6bace0ca7882311f17 78 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.9E-10 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13560 b622d6eb25116a6bace0ca7882311f17 78 Gene3D G3DSA:1.20.20.10 1 78 6.9E-28 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13560 b622d6eb25116a6bace0ca7882311f17 78 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.5E-29 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TVD_13560 b622d6eb25116a6bace0ca7882311f17 78 Pfam PF00137 ATP synthase subunit C 11 71 5.0E-8 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TVD_13560 b622d6eb25116a6bace0ca7882311f17 78 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.566 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13560 b622d6eb25116a6bace0ca7882311f17 78 SUPERFAMILY SSF81333 2 76 1.44E-16 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily TVD_13560 b622d6eb25116a6bace0ca7882311f17 78 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_06700 89bdaf1f3c3b3de5897c1a6101a3070c 217 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 8 199 7.6E-49 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TVD_06700 89bdaf1f3c3b3de5897c1a6101a3070c 217 SUPERFAMILY SSF52540 7 210 3.08E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06700 89bdaf1f3c3b3de5897c1a6101a3070c 217 Gene3D G3DSA:3.40.50.300 4 210 1.1E-67 T 11-10-2018 TVD_06700 89bdaf1f3c3b3de5897c1a6101a3070c 217 Hamap MF_00165 Thymidylate kinase [tmk]. 9 210 30.442 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 TVD_06700 89bdaf1f3c3b3de5897c1a6101a3070c 217 Pfam PF02223 Thymidylate kinase 13 199 4.4E-46 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 TVD_02005 7eb547b8bc15d2b4d0264b7242bbe5c0 74 Pfam PF09720 Putative addiction module component 12 64 1.8E-14 T 11-10-2018 IPR013406 Conserved hypothetical protein CHP02574, addiction module TVD_09620 8abb21961494c495975858ef812d03cf 740 Pfam PF01170 Putative RNA methylase family UPF0020 180 392 1.7E-43 T 11-10-2018 IPR000241 Putative RNA methylase domain TVD_09620 8abb21961494c495975858ef812d03cf 740 PIRSF PIRSF037618 17 738 1.7E-243 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 TVD_09620 8abb21961494c495975858ef812d03cf 740 Gene3D G3DSA:3.30.750.80 408 504 6.3E-32 T 11-10-2018 TVD_09620 8abb21961494c495975858ef812d03cf 740 Pfam PF02926 THUMP domain 54 171 1.8E-9 T 11-10-2018 IPR004114 THUMP domain GO:0003723 TVD_09620 8abb21961494c495975858ef812d03cf 740 SUPERFAMILY SSF53335 166 393 5.79E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_09620 8abb21961494c495975858ef812d03cf 740 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 22 737 28.805 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 TVD_09620 8abb21961494c495975858ef812d03cf 740 SUPERFAMILY SSF53335 411 732 4.84E-48 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_09620 8abb21961494c495975858ef812d03cf 740 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 505 609 1.2E-14 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 TVD_09620 8abb21961494c495975858ef812d03cf 740 Gene3D G3DSA:3.40.50.150 505 737 3.1E-61 T 11-10-2018 TVD_09620 8abb21961494c495975858ef812d03cf 740 Gene3D G3DSA:3.30.2130.30 24 276 4.5E-120 T 11-10-2018 TVD_09620 8abb21961494c495975858ef812d03cf 740 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 219 230 - T 11-10-2018 IPR000241 Putative RNA methylase domain TVD_09620 8abb21961494c495975858ef812d03cf 740 SMART SM00981 74 172 1.0E-13 T 11-10-2018 IPR004114 THUMP domain GO:0003723 TVD_09620 8abb21961494c495975858ef812d03cf 740 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 324 330 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TVD_09620 8abb21961494c495975858ef812d03cf 740 Gene3D G3DSA:3.40.50.150 187 390 4.5E-120 T 11-10-2018 TVD_12415 3a186967dc099c1c1563bd44f626e9ce 187 Pfam PF08281 Sigma-70, region 4 108 158 7.9E-14 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TVD_12415 3a186967dc099c1c1563bd44f626e9ce 187 SUPERFAMILY SSF88946 10 89 3.41E-17 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TVD_12415 3a186967dc099c1c1563bd44f626e9ce 187 Gene3D G3DSA:1.10.10.10 104 164 2.4E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_12415 3a186967dc099c1c1563bd44f626e9ce 187 SUPERFAMILY SSF88659 100 162 8.72E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TVD_12415 3a186967dc099c1c1563bd44f626e9ce 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 162 4.5E-28 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TVD_12415 3a186967dc099c1c1563bd44f626e9ce 187 Gene3D G3DSA:1.10.1740.10 3 81 8.1E-19 T 11-10-2018 TVD_12415 3a186967dc099c1c1563bd44f626e9ce 187 Pfam PF04542 Sigma-70 region 2 17 79 1.7E-13 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TVD_12170 c38df7fee5d6b1839002de905764c9c2 100 Pfam PF06844 Protein of unknown function (DUF1244) 27 93 5.6E-39 T 11-10-2018 IPR023163 SMc04008-like domain TVD_12170 c38df7fee5d6b1839002de905764c9c2 100 SUPERFAMILY SSF158757 1 77 2.09E-38 T 11-10-2018 IPR036810 SMc04008-like superfamily TVD_12170 c38df7fee5d6b1839002de905764c9c2 100 Gene3D G3DSA:1.10.3340.10 1 99 8.5E-48 T 11-10-2018 IPR036810 SMc04008-like superfamily TVD_08855 c3f9c96a1505949732ae273394693147 510 Gene3D G3DSA:3.40.50.300 226 398 1.3E-30 T 11-10-2018 TVD_08855 c3f9c96a1505949732ae273394693147 510 SUPERFAMILY SSF52540 229 496 1.86E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_08855 c3f9c96a1505949732ae273394693147 510 SMART SM00382 264 399 9.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_08855 c3f9c96a1505949732ae273394693147 510 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 268 396 4.3E-19 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_08855 c3f9c96a1505949732ae273394693147 510 Gene3D G3DSA:1.10.8.60 399 503 2.1E-11 T 11-10-2018 TVD_03655 f3a7c214dc7e058106b9cbabb5d18009 114 Pfam PF10993 Protein of unknown function (DUF2818) 11 103 8.6E-34 T 11-10-2018 IPR016768 Uncharacterised conserved protein UCP019883, membrane TVD_03655 f3a7c214dc7e058106b9cbabb5d18009 114 PIRSF PIRSF019883 7 107 8.8E-24 T 11-10-2018 IPR016768 Uncharacterised conserved protein UCP019883, membrane TVD_08580 2e82b77c08c7704609f4cf5b7bf6e1d7 75 Gene3D G3DSA:3.40.1620.10 1 39 3.1E-6 T 11-10-2018 TVD_08580 2e82b77c08c7704609f4cf5b7bf6e1d7 75 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 42 8.1E-7 T 11-10-2018 TVD_08580 2e82b77c08c7704609f4cf5b7bf6e1d7 75 SUPERFAMILY SSF143120 1 44 2.35E-8 T 11-10-2018 IPR036165 YefM-like superfamily TVD_08580 2e82b77c08c7704609f4cf5b7bf6e1d7 75 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 43 9.1E-9 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TVD_00920 4bc9d724e87004156c37a02989c96c24 298 Pfam PF08668 HDOD domain 22 218 2.1E-50 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD TVD_00920 4bc9d724e87004156c37a02989c96c24 298 Gene3D G3DSA:1.10.3210.10 1 289 1.3E-69 T 11-10-2018 TVD_00920 4bc9d724e87004156c37a02989c96c24 298 SUPERFAMILY SSF109604 8 280 2.51E-62 T 11-10-2018 TVD_10315 8d7522da87d8044a25049cfcfd742d7c 629 SUPERFAMILY SSF54534 263 363 1.7E-21 T 11-10-2018 TVD_10315 8d7522da87d8044a25049cfcfd742d7c 629 Gene3D G3DSA:3.10.50.40 266 362 1.8E-25 T 11-10-2018 TVD_10315 8d7522da87d8044a25049cfcfd742d7c 629 Pfam PF13624 SurA N-terminal domain 1 163 1.7E-48 T 11-10-2018 TVD_10315 8d7522da87d8044a25049cfcfd742d7c 629 Pfam PF00639 PPIC-type PPIASE domain 275 359 8.1E-18 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 TVD_10315 8d7522da87d8044a25049cfcfd742d7c 629 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 TVD_10315 8d7522da87d8044a25049cfcfd742d7c 629 SUPERFAMILY SSF109998 41 238 8.63E-24 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily TVD_10315 8d7522da87d8044a25049cfcfd742d7c 629 Gene3D G3DSA:1.10.4030.30 242 374 1.8E-25 T 11-10-2018 TVD_12450 9218b0d670263acd3341ccfc6e7dbcab 101 Gene3D G3DSA:3.40.30.10 4 101 1.0E-28 T 11-10-2018 TVD_12450 9218b0d670263acd3341ccfc6e7dbcab 101 SUPERFAMILY SSF52833 4 101 2.35E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_01010 353060b49a9dc189b2348f3996b5e315 215 Gene3D G3DSA:2.40.160.20 29 215 8.2E-21 T 11-10-2018 TVD_01010 353060b49a9dc189b2348f3996b5e315 215 Pfam PF13505 Outer membrane protein beta-barrel domain 14 215 9.9E-26 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel TVD_01010 353060b49a9dc189b2348f3996b5e315 215 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 207 215 - T 11-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 TVD_01010 353060b49a9dc189b2348f3996b5e315 215 SUPERFAMILY SSF56925 29 215 7.32E-25 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TVD_05100 3685b7ef68672ebccef8f8bba8fbeb35 332 Gene3D G3DSA:3.40.50.720 5 305 9.1E-126 T 11-10-2018 TVD_05100 3685b7ef68672ebccef8f8bba8fbeb35 332 Pfam PF02719 Polysaccharide biosynthesis protein 7 278 2.9E-98 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain TVD_05100 3685b7ef68672ebccef8f8bba8fbeb35 332 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 2 321 1.9E-163 T 11-10-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00520+4.2.1.115|MetaCyc: PWY-6143|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 TVD_05100 3685b7ef68672ebccef8f8bba8fbeb35 332 SUPERFAMILY SSF51735 6 244 1.85E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_05100 3685b7ef68672ebccef8f8bba8fbeb35 332 Gene3D G3DSA:3.90.25.30 168 309 9.1E-126 T 11-10-2018 TVD_06315 af09b574a794815a7567bc74b5c0497b 383 SUPERFAMILY SSF160544 245 352 1.83E-36 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TVD_06315 af09b574a794815a7567bc74b5c0497b 383 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 1.6E-117 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TVD_06315 af09b574a794815a7567bc74b5c0497b 383 Gene3D G3DSA:3.40.1690.10 218 360 8.7E-52 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TVD_06315 af09b574a794815a7567bc74b5c0497b 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 2.8E-34 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TVD_06315 af09b574a794815a7567bc74b5c0497b 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 2.8E-34 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TVD_06315 af09b574a794815a7567bc74b5c0497b 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 2.8E-34 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TVD_06315 af09b574a794815a7567bc74b5c0497b 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 2.8E-34 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TVD_06315 af09b574a794815a7567bc74b5c0497b 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 2.8E-34 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TVD_06315 af09b574a794815a7567bc74b5c0497b 383 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 9.6E-118 T 11-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 TVD_01195 6e56ae93451c685cf369310026abfc0f 253 Gene3D G3DSA:3.30.540.10 1 132 2.7E-43 T 11-10-2018 TVD_01195 6e56ae93451c685cf369310026abfc0f 253 PRINTS PR00378 Lithium-sensitive myo-inositol monophosphatase family signature 11 30 2.5E-5 T 11-10-2018 IPR020552 Inositol monophosphatase, lithium-sensitive GO:0046854 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363|Reactome: R-HSA-1855183 TVD_01195 6e56ae93451c685cf369310026abfc0f 253 PRINTS PR00378 Lithium-sensitive myo-inositol monophosphatase family signature 227 249 2.5E-5 T 11-10-2018 IPR020552 Inositol monophosphatase, lithium-sensitive GO:0046854 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363|Reactome: R-HSA-1855183 TVD_01195 6e56ae93451c685cf369310026abfc0f 253 PRINTS PR00378 Lithium-sensitive myo-inositol monophosphatase family signature 125 143 2.5E-5 T 11-10-2018 IPR020552 Inositol monophosphatase, lithium-sensitive GO:0046854 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363|Reactome: R-HSA-1855183 TVD_01195 6e56ae93451c685cf369310026abfc0f 253 SUPERFAMILY SSF56655 2 249 9.29E-69 T 11-10-2018 TVD_01195 6e56ae93451c685cf369310026abfc0f 253 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 74 87 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site TVD_01195 6e56ae93451c685cf369310026abfc0f 253 Gene3D G3DSA:3.40.190.80 134 251 1.3E-23 T 11-10-2018 TVD_01195 6e56ae93451c685cf369310026abfc0f 253 Pfam PF00459 Inositol monophosphatase family 3 244 2.3E-49 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_01195 6e56ae93451c685cf369310026abfc0f 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 123 146 5.3E-27 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_01195 6e56ae93451c685cf369310026abfc0f 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 74 90 5.3E-27 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_01195 6e56ae93451c685cf369310026abfc0f 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 199 223 5.3E-27 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_01195 6e56ae93451c685cf369310026abfc0f 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 32 52 5.3E-27 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_01195 6e56ae93451c685cf369310026abfc0f 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 54 70 5.3E-27 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_12525 99e2a16a3268809994a50f3732633c4e 107 SUPERFAMILY SSF46626 6 105 1.34E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_12525 99e2a16a3268809994a50f3732633c4e 107 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 25 102 4.3E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_12525 99e2a16a3268809994a50f3732633c4e 107 Gene3D G3DSA:1.10.760.10 24 106 9.2E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_11265 04e366ce1055e9e53830f6f1253a0d3c 337 SUPERFAMILY SSF51735 5 184 1.5E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_11265 04e366ce1055e9e53830f6f1253a0d3c 337 Gene3D G3DSA:1.10.1040.10 193 337 3.3E-49 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TVD_11265 04e366ce1055e9e53830f6f1253a0d3c 337 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 324 1.3E-49 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TVD_11265 04e366ce1055e9e53830f6f1253a0d3c 337 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TVD_11265 04e366ce1055e9e53830f6f1253a0d3c 337 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 10 162 1.3E-41 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TVD_11265 04e366ce1055e9e53830f6f1253a0d3c 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 6.1E-33 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TVD_11265 04e366ce1055e9e53830f6f1253a0d3c 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 6.1E-33 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TVD_11265 04e366ce1055e9e53830f6f1253a0d3c 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 12 29 6.1E-33 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TVD_11265 04e366ce1055e9e53830f6f1253a0d3c 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 137 157 6.1E-33 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TVD_11265 04e366ce1055e9e53830f6f1253a0d3c 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 6.1E-33 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TVD_11265 04e366ce1055e9e53830f6f1253a0d3c 337 SUPERFAMILY SSF48179 183 335 4.76E-53 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TVD_11265 04e366ce1055e9e53830f6f1253a0d3c 337 Gene3D G3DSA:3.40.50.720 2 191 2.8E-51 T 11-10-2018 TVD_11265 04e366ce1055e9e53830f6f1253a0d3c 337 PIRSF PIRSF000114 6 336 2.0E-95 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TVD_11265 04e366ce1055e9e53830f6f1253a0d3c 337 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 8 326 35.46 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 TVD_04290 5210bdf5b8943647078b11b0c862a00a 315 Pfam PF05982 Na+-dependent bicarbonate transporter superfamily 5 308 1.9E-114 T 11-10-2018 IPR010293 Na+-dependent bicarbonate transporter superfamily TVD_08880 a3b6e0e36c1c6aea426207bf3ba47c3c 330 SUPERFAMILY SSF51735 121 292 1.53E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_08880 a3b6e0e36c1c6aea426207bf3ba47c3c 330 Pfam PF00107 Zinc-binding dehydrogenase 162 271 1.7E-12 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TVD_08880 a3b6e0e36c1c6aea426207bf3ba47c3c 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 6 329 9.0E-133 T 11-10-2018 IPR014188 Acrylyl-CoA reductase AcuI TVD_08880 a3b6e0e36c1c6aea426207bf3ba47c3c 330 Gene3D G3DSA:3.90.180.10 20 328 1.2E-121 T 11-10-2018 TVD_08880 a3b6e0e36c1c6aea426207bf3ba47c3c 330 Gene3D G3DSA:3.40.50.720 129 297 1.2E-121 T 11-10-2018 TVD_08880 a3b6e0e36c1c6aea426207bf3ba47c3c 330 SMART SM00829 19 327 1.9E-6 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TVD_08880 a3b6e0e36c1c6aea426207bf3ba47c3c 330 SUPERFAMILY SSF50129 5 148 4.41E-42 T 11-10-2018 IPR011032 GroES-like superfamily TVD_02180 0548506eb85eed1cd43fb799c1038b93 364 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 356 36.158 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_02180 0548506eb85eed1cd43fb799c1038b93 364 Gene3D G3DSA:3.40.50.2000 7 162 5.6E-111 T 11-10-2018 TVD_02180 0548506eb85eed1cd43fb799c1038b93 364 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 5 351 1.4E-102 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_02180 0548506eb85eed1cd43fb799c1038b93 364 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 186 333 5.3E-38 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 TVD_02180 0548506eb85eed1cd43fb799c1038b93 364 Gene3D G3DSA:3.40.50.2000 163 322 5.6E-111 T 11-10-2018 TVD_02180 0548506eb85eed1cd43fb799c1038b93 364 SUPERFAMILY SSF53756 5 357 1.59E-119 T 11-10-2018 TVD_02180 0548506eb85eed1cd43fb799c1038b93 364 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 143 5.2E-38 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_02665 fdfab2b14162e663d91cf13fc81f12ed 83 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 7 82 2.2E-12 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TVD_02665 fdfab2b14162e663d91cf13fc81f12ed 83 SUPERFAMILY SSF143011 4 83 3.14E-20 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_02665 fdfab2b14162e663d91cf13fc81f12ed 83 Gene3D G3DSA:3.30.2310.20 2 83 7.1E-20 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 9.7E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 9.7E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 9.7E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 9.7E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 9.7E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 9.7E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 9.7E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 SUPERFAMILY SSF52440 1 127 3.88E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 Pfam PF02142 MGS-like domain 956 1041 1.3E-22 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 3.6E-35 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 6.5E-71 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 SUPERFAMILY SSF56059 673 933 4.77E-105 T 11-10-2018 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 8.5E-40 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.259 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.593 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 Gene3D G3DSA:3.40.50.20 554 662 1.9E-49 T 11-10-2018 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 Gene3D G3DSA:3.40.50.20 1 116 4.0E-50 T 11-10-2018 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 SUPERFAMILY SSF56059 128 401 5.13E-109 T 11-10-2018 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 SMART SM01096 424 547 4.1E-70 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 Gene3D G3DSA:1.10.1030.10 404 553 4.2E-48 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 Gene3D G3DSA:3.30.470.20 665 935 5.2E-120 T 11-10-2018 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 SUPERFAMILY SSF48108 396 553 5.36E-51 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 SUPERFAMILY SSF52440 556 675 2.01E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 Gene3D G3DSA:3.40.50.1380 936 1071 1.8E-41 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 SMART SM00851 955 1041 8.1E-38 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 Gene3D G3DSA:3.30.470.20 120 403 4.0E-126 T 11-10-2018 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_03535 9290e3730b437cf13cd68f2ac808b744 1077 SUPERFAMILY SSF52335 935 1069 1.96E-43 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TVD_00530 c2c929bf2d5d6edff0d14c25f9ded3c7 368 Pfam PF14907 Uncharacterised nucleotidyltransferase 25 280 3.8E-54 T 11-10-2018 IPR039498 Uncharacterised nucleotidyltransferase TVD_05665 2a50a080036c1289c93c9a5201258419 744 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 5 722 1.3E-251 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_05665 2a50a080036c1289c93c9a5201258419 744 Pfam PF14814 Bifunctional transglycosylase second domain 35 118 3.5E-23 T 11-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_05665 2a50a080036c1289c93c9a5201258419 744 Pfam PF00912 Transglycosylase 131 302 2.1E-58 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_05665 2a50a080036c1289c93c9a5201258419 744 SUPERFAMILY SSF53955 125 325 1.01E-64 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TVD_05665 2a50a080036c1289c93c9a5201258419 744 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 135 672 2.1E-157 T 11-10-2018 TVD_05665 2a50a080036c1289c93c9a5201258419 744 Gene3D G3DSA:1.10.3810.10 123 327 4.8E-248 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_05665 2a50a080036c1289c93c9a5201258419 744 Gene3D G3DSA:3.30.2060.10 33 122 4.8E-248 T 11-10-2018 TVD_05665 2a50a080036c1289c93c9a5201258419 744 Gene3D G3DSA:3.40.710.10 25 681 4.8E-248 T 11-10-2018 TVD_05665 2a50a080036c1289c93c9a5201258419 744 PIRSF PIRSF002799 1 744 6.2E-281 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_05665 2a50a080036c1289c93c9a5201258419 744 SUPERFAMILY SSF56601 284 727 3.82E-113 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TVD_05665 2a50a080036c1289c93c9a5201258419 744 Pfam PF00905 Penicillin binding protein transpeptidase domain 400 671 2.0E-29 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TVD_01280 668ccea87356695383da13d0ced392f2 177 SUPERFAMILY SSF56420 3 162 4.45E-63 T 11-10-2018 IPR036821 Peptide deformylase superfamily TVD_01280 668ccea87356695383da13d0ced392f2 177 Hamap MF_00163 Peptide deformylase [def]. 2 162 32.308 T 11-10-2018 IPR023635 Peptide deformylase TVD_01280 668ccea87356695383da13d0ced392f2 177 PIRSF PIRSF004749 1 173 1.4E-54 T 11-10-2018 IPR023635 Peptide deformylase TVD_01280 668ccea87356695383da13d0ced392f2 177 PRINTS PR01576 Peptide deformylase signature 33 62 7.1E-38 T 11-10-2018 IPR023635 Peptide deformylase TVD_01280 668ccea87356695383da13d0ced392f2 177 PRINTS PR01576 Peptide deformylase signature 120 149 7.1E-38 T 11-10-2018 IPR023635 Peptide deformylase TVD_01280 668ccea87356695383da13d0ced392f2 177 PRINTS PR01576 Peptide deformylase signature 101 119 7.1E-38 T 11-10-2018 IPR023635 Peptide deformylase TVD_01280 668ccea87356695383da13d0ced392f2 177 PRINTS PR01576 Peptide deformylase signature 89 100 7.1E-38 T 11-10-2018 IPR023635 Peptide deformylase TVD_01280 668ccea87356695383da13d0ced392f2 177 Gene3D G3DSA:3.90.45.10 1 166 1.4E-63 T 11-10-2018 IPR036821 Peptide deformylase superfamily TVD_01280 668ccea87356695383da13d0ced392f2 177 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 160 3.1E-57 T 11-10-2018 IPR023635 Peptide deformylase TVD_01280 668ccea87356695383da13d0ced392f2 177 Pfam PF01327 Polypeptide deformylase 4 152 6.7E-51 T 11-10-2018 IPR023635 Peptide deformylase TVD_07115 537e87d299620fd8f4d1e4e11de7fc8e 288 SMART SM00382 59 247 1.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_07115 537e87d299620fd8f4d1e4e11de7fc8e 288 ProSitePatterns PS00211 ABC transporters family signature. 171 185 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_07115 537e87d299620fd8f4d1e4e11de7fc8e 288 Pfam PF00005 ABC transporter 53 199 3.5E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_07115 537e87d299620fd8f4d1e4e11de7fc8e 288 Gene3D G3DSA:3.40.50.300 34 278 2.1E-59 T 11-10-2018 TVD_07115 537e87d299620fd8f4d1e4e11de7fc8e 288 SUPERFAMILY SSF52540 53 255 8.04E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_08945 ae3cb5251f0298b4c261957172437b21 94 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 21 80 5.5E-8 T 11-10-2018 IPR018660 C-type lysozyme inhibitor TVD_08945 ae3cb5251f0298b4c261957172437b21 94 Gene3D G3DSA:2.40.128.200 16 92 7.4E-10 T 11-10-2018 IPR036328 C-type lysozyme inhibitor superfamily TVD_08945 ae3cb5251f0298b4c261957172437b21 94 SUPERFAMILY SSF141488 18 87 7.85E-9 T 11-10-2018 IPR036328 C-type lysozyme inhibitor superfamily TVD_04330 a77e8a1eb602dcb00ec445e844382e52 256 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.0E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_04330 a77e8a1eb602dcb00ec445e844382e52 256 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 2.0E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_04330 a77e8a1eb602dcb00ec445e844382e52 256 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 162 2.0E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_04330 a77e8a1eb602dcb00ec445e844382e52 256 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 191 204 2.0E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_04330 a77e8a1eb602dcb00ec445e844382e52 256 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 2.0E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_04330 a77e8a1eb602dcb00ec445e844382e52 256 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 201 2.7E-22 T 11-10-2018 TVD_04330 a77e8a1eb602dcb00ec445e844382e52 256 Gene3D G3DSA:3.40.50.1000 6 220 3.3E-71 T 11-10-2018 IPR023214 HAD superfamily TVD_04330 a77e8a1eb602dcb00ec445e844382e52 256 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 201 2.2E-12 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_04330 a77e8a1eb602dcb00ec445e844382e52 256 Gene3D G3DSA:1.10.150.240 18 99 3.3E-71 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TVD_04330 a77e8a1eb602dcb00ec445e844382e52 256 SUPERFAMILY SSF56784 5 223 6.14E-42 T 11-10-2018 IPR036412 HAD-like superfamily TVD_05580 94049de8796675ca9b40aa7e3634c123 267 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_05580 94049de8796675ca9b40aa7e3634c123 267 Gene3D G3DSA:3.40.50.300 15 267 1.1E-64 T 11-10-2018 TVD_05580 94049de8796675ca9b40aa7e3634c123 267 Pfam PF00005 ABC transporter 34 182 2.2E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_05580 94049de8796675ca9b40aa7e3634c123 267 SUPERFAMILY SSF52540 17 256 8.87E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_05580 94049de8796675ca9b40aa7e3634c123 267 SMART SM00382 42 231 8.8E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_11665 e1e60177c14e9a5f5ded797ffe8b933d 170 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 8 152 37.505 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 TVD_11665 e1e60177c14e9a5f5ded797ffe8b933d 170 Pfam PF03692 Putative zinc- or iron-chelating domain 29 97 3.1E-6 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein TVD_11665 e1e60177c14e9a5f5ded797ffe8b933d 170 PIRSF PIRSF006173 4 152 2.1E-58 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 TVD_12485 b78492fdf12adcfa1d8436b29a3b2367 271 Pfam PF00218 Indole-3-glycerol phosphate synthase 11 264 6.3E-93 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 TVD_12485 b78492fdf12adcfa1d8436b29a3b2367 271 SUPERFAMILY SSF51366 18 267 7.18E-87 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TVD_12485 b78492fdf12adcfa1d8436b29a3b2367 271 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 62 80 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 TVD_12485 b78492fdf12adcfa1d8436b29a3b2367 271 Gene3D G3DSA:3.20.20.70 3 271 1.8E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_12485 b78492fdf12adcfa1d8436b29a3b2367 271 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 9 268 35.735 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 TVD_09015 73823a3606b32da2edc7c6ee552eb92e 819 Pfam PF00563 EAL domain 565 802 9.1E-45 T 11-10-2018 IPR001633 EAL domain TVD_09015 73823a3606b32da2edc7c6ee552eb92e 819 Gene3D G3DSA:3.20.20.450 558 810 1.0E-47 T 11-10-2018 IPR035919 EAL domain superfamily TVD_09015 73823a3606b32da2edc7c6ee552eb92e 819 Gene3D G3DSA:3.30.70.270 422 548 1.1E-5 T 11-10-2018 TVD_09015 73823a3606b32da2edc7c6ee552eb92e 819 SMART SM00052 559 807 4.6E-13 T 11-10-2018 IPR001633 EAL domain TVD_09015 73823a3606b32da2edc7c6ee552eb92e 819 SUPERFAMILY SSF141868 566 802 3.53E-44 T 11-10-2018 IPR035919 EAL domain superfamily TVD_01220 65d9a6aeee4864afd4400bafadfa5524 448 Gene3D G3DSA:3.40.50.20 1 85 4.4E-34 T 11-10-2018 TVD_01220 65d9a6aeee4864afd4400bafadfa5524 448 SUPERFAMILY SSF51246 332 444 1.26E-42 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TVD_01220 65d9a6aeee4864afd4400bafadfa5524 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 1.1E-222 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 TVD_01220 65d9a6aeee4864afd4400bafadfa5524 448 SUPERFAMILY SSF52440 1 113 1.58E-46 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TVD_01220 65d9a6aeee4864afd4400bafadfa5524 448 Gene3D G3DSA:3.30.1490.20 131 203 1.9E-153 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TVD_01220 65d9a6aeee4864afd4400bafadfa5524 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TVD_01220 65d9a6aeee4864afd4400bafadfa5524 448 Gene3D G3DSA:3.30.470.20 86 433 1.9E-153 T 11-10-2018 TVD_01220 65d9a6aeee4864afd4400bafadfa5524 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.1E-43 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TVD_01220 65d9a6aeee4864afd4400bafadfa5524 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TVD_01220 65d9a6aeee4864afd4400bafadfa5524 448 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.2E-38 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TVD_01220 65d9a6aeee4864afd4400bafadfa5524 448 SUPERFAMILY SSF56059 83 349 1.63E-71 T 11-10-2018 TVD_01220 65d9a6aeee4864afd4400bafadfa5524 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.4E-81 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TVD_01220 65d9a6aeee4864afd4400bafadfa5524 448 SMART SM00878 336 441 7.1E-62 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 SUPERFAMILY SSF51621 429 712 1.91E-101 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 619 637 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 Gene3D G3DSA:1.10.274.10 196 320 5.8E-63 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 Pfam PF05524 PEP-utilising enzyme, N-terminal 178 300 1.7E-25 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 SUPERFAMILY SSF47831 206 316 1.44E-29 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 SUPERFAMILY SSF55781 2 162 7.41E-32 T 11-10-2018 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 427 711 7.1E-100 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 Gene3D G3DSA:3.30.450.40 1 164 2.6E-47 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 Gene3D G3DSA:3.50.30.10 179 406 5.8E-63 T 11-10-2018 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 Pfam PF00391 PEP-utilising enzyme, mobile domain 325 398 5.3E-16 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 179 738 1.7E-142 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 SMART SM00065 17 164 5.6E-22 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 672 684 4.9E-25 T 11-10-2018 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 619 634 4.9E-25 T 11-10-2018 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 466 485 4.9E-25 T 11-10-2018 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 636 651 4.9E-25 T 11-10-2018 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 Pfam PF01590 GAF domain 19 154 4.2E-17 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 Gene3D G3DSA:3.20.20.60 407 745 3.2E-110 T 11-10-2018 TVD_11950 b726dc05325a444e39e3ecfc5e5fb9a0 755 SUPERFAMILY SSF52009 299 419 1.24E-26 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 TVD_01540 323282fd86f6c5ae841e74659a96df27 103 SUPERFAMILY SSF46626 18 101 2.66E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_01540 323282fd86f6c5ae841e74659a96df27 103 Gene3D G3DSA:1.10.760.10 30 102 8.9E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_01540 323282fd86f6c5ae841e74659a96df27 103 Pfam PF00034 Cytochrome c 34 92 3.6E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_07265 1202d3a686a387c8d7fb387e4884ac1e 249 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 179 196 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 TVD_07265 1202d3a686a387c8d7fb387e4884ac1e 249 SUPERFAMILY SSF64005 10 229 1.07E-73 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 TVD_07265 1202d3a686a387c8d7fb387e4884ac1e 249 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 233 1.1E-70 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TVD_07265 1202d3a686a387c8d7fb387e4884ac1e 249 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 233 2.9E-71 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TVD_07265 1202d3a686a387c8d7fb387e4884ac1e 249 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 234 37.053 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 TVD_07265 1202d3a686a387c8d7fb387e4884ac1e 249 Gene3D G3DSA:3.40.1180.10 3 236 4.6E-81 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 TVD_09610 f338c5003fbd7914a7ec783b9631e4ef 301 Pfam PF00005 ABC transporter 20 162 7.5E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_09610 f338c5003fbd7914a7ec783b9631e4ef 301 SMART SM00382 28 219 2.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_09610 f338c5003fbd7914a7ec783b9631e4ef 301 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_09610 f338c5003fbd7914a7ec783b9631e4ef 301 SUPERFAMILY SSF52540 4 223 6.29E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_09610 f338c5003fbd7914a7ec783b9631e4ef 301 Gene3D G3DSA:3.40.50.300 1 230 8.6E-73 T 11-10-2018 TVD_02080 5276351802fa323b8d7548115a7da71c 380 SUPERFAMILY SSF50494 62 280 1.58E-63 T 11-10-2018 IPR009003 Peptidase S1, PA clan TVD_02080 5276351802fa323b8d7548115a7da71c 380 Gene3D G3DSA:2.30.42.10 279 379 1.9E-25 T 11-10-2018 TVD_02080 5276351802fa323b8d7548115a7da71c 380 Pfam PF13180 PDZ domain 285 374 3.4E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_02080 5276351802fa323b8d7548115a7da71c 380 SMART SM00228 284 366 1.8E-12 T 11-10-2018 IPR001478 PDZ domain GO:0005515 TVD_02080 5276351802fa323b8d7548115a7da71c 380 Gene3D G3DSA:2.40.10.120 62 278 2.7E-76 T 11-10-2018 TVD_02080 5276351802fa323b8d7548115a7da71c 380 Pfam PF13365 Trypsin-like peptidase domain 111 245 7.5E-32 T 11-10-2018 TVD_02080 5276351802fa323b8d7548115a7da71c 380 SUPERFAMILY SSF50156 242 367 1.97E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 TVD_02080 5276351802fa323b8d7548115a7da71c 380 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 2.2E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_02080 5276351802fa323b8d7548115a7da71c 380 PRINTS PR00834 HtrA/DegQ protease family signature 324 336 2.2E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_02080 5276351802fa323b8d7548115a7da71c 380 PRINTS PR00834 HtrA/DegQ protease family signature 181 205 2.2E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_02080 5276351802fa323b8d7548115a7da71c 380 PRINTS PR00834 HtrA/DegQ protease family signature 238 255 2.2E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_02080 5276351802fa323b8d7548115a7da71c 380 PRINTS PR00834 HtrA/DegQ protease family signature 141 161 2.2E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_02080 5276351802fa323b8d7548115a7da71c 380 PRINTS PR00834 HtrA/DegQ protease family signature 120 132 2.2E-52 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TVD_08225 5c0374243bdbedf3805a58d6400a9660 602 SUPERFAMILY SSF52540 130 325 5.7E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_08225 5c0374243bdbedf3805a58d6400a9660 602 SMART SM00382 142 279 1.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_08225 5c0374243bdbedf3805a58d6400a9660 602 SMART SM00382 385 514 4.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_08225 5c0374243bdbedf3805a58d6400a9660 602 Gene3D G3DSA:3.40.50.300 374 529 8.7E-38 T 11-10-2018 TVD_08225 5c0374243bdbedf3805a58d6400a9660 602 Gene3D G3DSA:3.40.50.300 118 291 2.0E-22 T 11-10-2018 TVD_08225 5c0374243bdbedf3805a58d6400a9660 602 SUPERFAMILY SSF52540 369 563 1.71E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_08225 5c0374243bdbedf3805a58d6400a9660 602 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 146 275 5.4E-14 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_08225 5c0374243bdbedf3805a58d6400a9660 602 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 390 510 3.1E-27 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_07845 7efb2ababba4e39760cd2d06943d4288 396 Gene3D G3DSA:3.90.1580.10 322 396 7.0E-9 T 11-10-2018 TVD_07845 7efb2ababba4e39760cd2d06943d4288 396 SUPERFAMILY SSF109854 6 149 1.26E-11 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes TVD_07845 7efb2ababba4e39760cd2d06943d4288 396 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 23 393 5.4E-78 T 11-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 TVD_07845 7efb2ababba4e39760cd2d06943d4288 396 Pfam PF12867 DinB superfamily 22 150 1.9E-9 T 11-10-2018 IPR024775 DinB-like domain TVD_07845 7efb2ababba4e39760cd2d06943d4288 396 Pfam PF03781 Sulfatase-modifying factor enzyme 1 181 320 2.2E-23 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TVD_07845 7efb2ababba4e39760cd2d06943d4288 396 Pfam PF03781 Sulfatase-modifying factor enzyme 1 322 394 1.8E-10 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TVD_07845 7efb2ababba4e39760cd2d06943d4288 396 Gene3D G3DSA:3.90.1580.10 178 321 5.8E-25 T 11-10-2018 TVD_07845 7efb2ababba4e39760cd2d06943d4288 396 Gene3D G3DSA:1.20.120.450 1 156 2.6E-10 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes TVD_07845 7efb2ababba4e39760cd2d06943d4288 396 SUPERFAMILY SSF56436 181 395 2.07E-52 T 11-10-2018 IPR016187 C-type lectin fold TVD_02620 eda7e0fcb1e4a054b4bc25c8f213ff92 180 Gene3D G3DSA:2.20.25.120 56 88 4.8E-53 T 11-10-2018 TVD_02620 eda7e0fcb1e4a054b4bc25c8f213ff92 180 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 13 149 9.2E-47 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 TVD_02620 eda7e0fcb1e4a054b4bc25c8f213ff92 180 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 13 173 4.4E-43 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 TVD_02620 eda7e0fcb1e4a054b4bc25c8f213ff92 180 SUPERFAMILY SSF52540 11 176 4.43E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_02620 eda7e0fcb1e4a054b4bc25c8f213ff92 180 Gene3D G3DSA:3.40.50.300 13 172 4.8E-53 T 11-10-2018 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 PRINTS PR00151 Porphobilinogen deaminase signature 29 49 1.0E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 PRINTS PR00151 Porphobilinogen deaminase signature 60 79 1.0E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 PRINTS PR00151 Porphobilinogen deaminase signature 127 144 1.0E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 PRINTS PR00151 Porphobilinogen deaminase signature 108 125 1.0E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 PRINTS PR00151 Porphobilinogen deaminase signature 214 231 1.0E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 Gene3D G3DSA:3.40.190.10 87 186 3.4E-76 T 11-10-2018 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 1 280 1.5E-102 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 1 196 3.0E-71 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 211 279 3.4E-20 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 SUPERFAMILY SSF54782 204 293 4.18E-27 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 SUPERFAMILY SSF53850 1 202 7.71E-75 T 11-10-2018 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 PIRSF PIRSF001438 1 297 2.1E-111 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 Gene3D G3DSA:3.30.160.40 205 289 2.6E-27 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 Gene3D G3DSA:3.40.190.10 1 194 3.4E-76 T 11-10-2018 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 215 231 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_13435 3b839524c5a6a1f15faa26897bb022bd 300 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 1 281 35.08 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_09135 de828c1902f6a66c8e7a462decbc4e67 346 Gene3D G3DSA:3.30.460.10 27 169 9.4E-28 T 11-10-2018 TVD_09135 de828c1902f6a66c8e7a462decbc4e67 346 SUPERFAMILY SSF81301 31 207 7.85E-32 T 11-10-2018 TVD_09135 de828c1902f6a66c8e7a462decbc4e67 346 SMART SM00954 70 189 2.2E-19 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 TVD_09135 de828c1902f6a66c8e7a462decbc4e67 346 Pfam PF04607 Region found in RelA / SpoT proteins 70 179 5.9E-17 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 TVD_13535 b0ac5a71800717a868c80e96af1d8617 209 Pfam PF02527 rRNA small subunit methyltransferase G 24 172 1.0E-39 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TVD_13535 b0ac5a71800717a868c80e96af1d8617 209 Gene3D G3DSA:3.40.50.150 9 208 5.7E-52 T 11-10-2018 TVD_13535 b0ac5a71800717a868c80e96af1d8617 209 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 203 21.889 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TVD_13535 b0ac5a71800717a868c80e96af1d8617 209 SUPERFAMILY SSF53335 15 206 6.18E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_13535 b0ac5a71800717a868c80e96af1d8617 209 PIRSF PIRSF003078 5 209 7.6E-41 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TVD_13535 b0ac5a71800717a868c80e96af1d8617 209 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 28 205 4.7E-37 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TVD_10305 0331853ca95d9306fe58378e7c66e8d9 619 PIRSF PIRSF002741 73 605 3.3E-113 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TVD_10305 0331853ca95d9306fe58378e7c66e8d9 619 Gene3D G3DSA:3.40.190.10 111 592 1.1E-122 T 11-10-2018 TVD_10305 0331853ca95d9306fe58378e7c66e8d9 619 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 143 512 9.6E-80 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain TVD_10305 0331853ca95d9306fe58378e7c66e8d9 619 Gene3D G3DSA:3.90.76.10 130 249 1.1E-122 T 11-10-2018 TVD_10305 0331853ca95d9306fe58378e7c66e8d9 619 Gene3D G3DSA:3.10.105.10 353 578 1.1E-122 T 11-10-2018 TVD_10305 0331853ca95d9306fe58378e7c66e8d9 619 SUPERFAMILY SSF53850 96 600 3.57E-127 T 11-10-2018 TVD_03465 3dbd1f9e81c11049b30b3750c148e64c 334 Pfam PF13310 Virulence protein RhuM family 65 136 7.6E-25 T 11-10-2018 IPR011204 Virulence protein RhuM-like TVD_03465 3dbd1f9e81c11049b30b3750c148e64c 334 Pfam PF02661 Fic/DOC family 229 283 7.8E-9 T 11-10-2018 IPR003812 Fido domain TVD_03465 3dbd1f9e81c11049b30b3750c148e64c 334 SUPERFAMILY SSF140931 250 288 8.76E-7 T 11-10-2018 IPR036597 Fido-like domain superfamily TVD_03465 3dbd1f9e81c11049b30b3750c148e64c 334 Gene3D G3DSA:1.20.120.1870 210 330 1.4E-14 T 11-10-2018 TVD_12460 743b3d6016ae534d346d8b2e98231490 432 PIRSF PIRSF000139 24 427 1.9E-81 T 11-10-2018 TVD_12460 743b3d6016ae534d346d8b2e98231490 432 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_12460 743b3d6016ae534d346d8b2e98231490 432 SUPERFAMILY SSF46548 12 116 4.71E-20 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_12460 743b3d6016ae534d346d8b2e98231490 432 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 35 46 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_12460 743b3d6016ae534d346d8b2e98231490 432 Pfam PF13534 4Fe-4S dicluster domain 34 101 4.5E-10 T 11-10-2018 TVD_12460 743b3d6016ae534d346d8b2e98231490 432 Gene3D G3DSA:1.10.1060.10 8 123 3.5E-9 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_12460 743b3d6016ae534d346d8b2e98231490 432 Pfam PF02754 Cysteine-rich domain 195 276 6.3E-9 T 11-10-2018 IPR004017 Cysteine-rich domain TVD_12460 743b3d6016ae534d346d8b2e98231490 432 Pfam PF02754 Cysteine-rich domain 314 399 4.1E-10 T 11-10-2018 IPR004017 Cysteine-rich domain TVD_03590 9f1c8d8309847d5fcda9f0c396bcc529 158 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.558 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03590 9f1c8d8309847d5fcda9f0c396bcc529 158 Gene3D G3DSA:3.40.50.12280 2 158 1.1E-80 T 11-10-2018 TVD_03590 9f1c8d8309847d5fcda9f0c396bcc529 158 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 1.7E-22 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03590 9f1c8d8309847d5fcda9f0c396bcc529 158 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 2.3E-78 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03590 9f1c8d8309847d5fcda9f0c396bcc529 158 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03590 9f1c8d8309847d5fcda9f0c396bcc529 158 SUPERFAMILY SSF56770 9 153 4.84E-68 T 11-10-2018 TVD_08765 fa9491b24fee878bc9c1618f7a217479 539 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 80 526 1.4E-140 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 TVD_08765 fa9491b24fee878bc9c1618f7a217479 539 ProSitePatterns PS01303 BCCT family of transporters signature. 344 353 - T 11-10-2018 IPR018093 BCCT transporter, conserved site TVD_08765 fa9491b24fee878bc9c1618f7a217479 539 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 41 526 5.7E-180 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 Gene3D G3DSA:3.20.20.450 453 702 5.6E-95 T 11-10-2018 IPR035919 EAL domain superfamily TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 Gene3D G3DSA:3.30.450.20 142 274 3.4E-21 T 11-10-2018 TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 Pfam PF00072 Response regulator receiver domain 15 124 2.4E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 Pfam PF00563 EAL domain 457 691 1.1E-69 T 11-10-2018 IPR001633 EAL domain TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 277 440 2.3E-43 T 11-10-2018 IPR000160 GGDEF domain TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 SUPERFAMILY SSF141868 456 698 1.57E-84 T 11-10-2018 IPR035919 EAL domain superfamily TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 SUPERFAMILY SSF55785 139 267 6.28E-18 T 11-10-2018 IPR035965 PAS domain superfamily TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 SMART SM00267 269 441 2.3E-67 T 11-10-2018 IPR000160 GGDEF domain TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 SUPERFAMILY SSF52172 11 170 1.99E-37 T 11-10-2018 IPR011006 CheY-like superfamily TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 Gene3D G3DSA:3.40.50.2300 6 141 1.1E-31 T 11-10-2018 TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 274 5.0E-18 T 11-10-2018 IPR000014 PAS domain TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 SUPERFAMILY SSF55073 285 443 1.41E-51 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 SMART SM00091 149 215 1.1E-11 T 11-10-2018 IPR000014 PAS domain TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 Gene3D G3DSA:3.30.70.270 275 452 1.2E-61 T 11-10-2018 TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 SMART SM00052 451 696 6.8E-109 T 11-10-2018 IPR001633 EAL domain TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 Pfam PF08448 PAS fold 155 271 7.1E-12 T 11-10-2018 IPR013656 PAS fold-4 TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 SMART SM00448 13 124 4.6E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_04985 f2ec63e10b85a652bab09b33bd4b6c40 711 Pfam PF00990 Diguanylate cyclase, GGDEF domain 280 435 1.3E-51 T 11-10-2018 IPR000160 GGDEF domain TVD_05125 46365dad3ab09d331990bf1e806da613 350 SUPERFAMILY SSF51269 287 349 2.09E-16 T 11-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 TVD_05125 46365dad3ab09d331990bf1e806da613 350 SMART SM00858 292 350 3.8E-6 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 TVD_05125 46365dad3ab09d331990bf1e806da613 350 Gene3D G3DSA:3.20.20.70 5 278 2.9E-92 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_05125 46365dad3ab09d331990bf1e806da613 350 SUPERFAMILY SSF51569 6 302 2.51E-92 T 11-10-2018 TVD_05125 46365dad3ab09d331990bf1e806da613 350 Gene3D G3DSA:3.90.1210.10 282 349 2.3E-17 T 11-10-2018 TVD_05125 46365dad3ab09d331990bf1e806da613 350 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 18 344 1.0E-151 T 11-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 TVD_05125 46365dad3ab09d331990bf1e806da613 350 Pfam PF03102 NeuB family 39 277 4.1E-87 T 11-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 TVD_05125 46365dad3ab09d331990bf1e806da613 350 Pfam PF08666 SAF domain 293 349 5.1E-6 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 TVD_11355 1c0ae335a3c2815ab5a30b9ea2e227a3 216 PIRSF PIRSF000705 3 206 1.1E-57 T 11-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 TVD_11355 1c0ae335a3c2815ab5a30b9ea2e227a3 216 Gene3D G3DSA:3.40.50.300 8 200 1.7E-46 T 11-10-2018 TVD_11355 1c0ae335a3c2815ab5a30b9ea2e227a3 216 SUPERFAMILY SSF52540 8 209 1.25E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_11355 1c0ae335a3c2815ab5a30b9ea2e227a3 216 Pfam PF01712 Deoxynucleoside kinase 9 197 2.5E-34 T 11-10-2018 IPR031314 Deoxynucleoside kinase domain TVD_07740 848441181c9f215d77bbc2351009cd8b 243 Pfam PF00535 Glycosyl transferase family 2 8 129 5.0E-27 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TVD_07740 848441181c9f215d77bbc2351009cd8b 243 Gene3D G3DSA:3.90.550.10 1 205 2.5E-39 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_07740 848441181c9f215d77bbc2351009cd8b 243 SUPERFAMILY SSF53448 4 184 1.5E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_08590 c24c1d6099d74132e95e7473dedc681c 561 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 37 53 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TVD_08590 c24c1d6099d74132e95e7473dedc681c 561 SUPERFAMILY SSF89000 386 435 4.32E-12 T 11-10-2018 TVD_08590 c24c1d6099d74132e95e7473dedc681c 561 Pfam PF00682 HMGL-like 30 308 3.9E-69 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 TVD_08590 c24c1d6099d74132e95e7473dedc681c 561 Gene3D G3DSA:3.30.160.270 375 547 5.2E-43 T 11-10-2018 TVD_08590 c24c1d6099d74132e95e7473dedc681c 561 Gene3D G3DSA:3.20.20.70 9 374 7.8E-142 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_08590 c24c1d6099d74132e95e7473dedc681c 561 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 2 550 49.179 T 11-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TVD_08590 c24c1d6099d74132e95e7473dedc681c 561 SUPERFAMILY SSF51569 19 327 1.01E-92 T 11-10-2018 TVD_08590 c24c1d6099d74132e95e7473dedc681c 561 Pfam PF08502 LeuA allosteric (dimerisation) domain 420 546 3.1E-18 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TVD_08590 c24c1d6099d74132e95e7473dedc681c 561 SUPERFAMILY SSF110921 445 546 5.36E-19 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TVD_08590 c24c1d6099d74132e95e7473dedc681c 561 SMART SM00917 420 549 6.3E-15 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TVD_08590 c24c1d6099d74132e95e7473dedc681c 561 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 240 253 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.0E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 PRINTS PR00301 70kDa heat shock protein signature 469 485 3.0E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 PRINTS PR00301 70kDa heat shock protein signature 365 385 3.0E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.0E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.0E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 PRINTS PR00301 70kDa heat shock protein signature 138 158 3.0E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 PRINTS PR00301 70kDa heat shock protein signature 334 350 3.0E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 PRINTS PR00301 70kDa heat shock protein signature 198 208 3.0E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 PRINTS PR00301 70kDa heat shock protein signature 388 407 3.0E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 Gene3D G3DSA:3.90.640.10 229 316 1.4E-167 T 11-10-2018 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 2.5E-291 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 Gene3D G3DSA:3.30.420.40 180 366 1.4E-167 T 11-10-2018 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 SUPERFAMILY SSF53067 4 184 3.4E-66 T 11-10-2018 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 Gene3D G3DSA:1.20.1270.10 524 607 1.1E-23 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 SUPERFAMILY SSF53067 187 382 1.88E-67 T 11-10-2018 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 SUPERFAMILY SSF100920 384 540 1.16E-60 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 635 36.964 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 Gene3D G3DSA:2.60.34.10 384 523 1.3E-64 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 Gene3D G3DSA:3.30.420.40 5 379 1.4E-167 T 11-10-2018 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 SUPERFAMILY SSF100934 507 608 2.75E-21 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 TVD_11635 7ffdbcd98f6b2c8af3b4b2dc8445346d 643 Pfam PF00012 Hsp70 protein 4 603 2.4E-264 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 TVD_04045 2305cadfd39dd59c0e9c8b957e368892 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 2.0E-34 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TVD_04045 2305cadfd39dd59c0e9c8b957e368892 108 Gene3D G3DSA:3.30.1310.10 1 108 8.2E-44 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily TVD_04045 2305cadfd39dd59c0e9c8b957e368892 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 5.1E-33 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TVD_04045 2305cadfd39dd59c0e9c8b957e368892 108 SUPERFAMILY SSF82607 10 102 1.7E-35 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily TVD_04045 2305cadfd39dd59c0e9c8b957e368892 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 95 22.361 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TVD_04045 2305cadfd39dd59c0e9c8b957e368892 108 PIRSF PIRSF004555 2 108 2.0E-39 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family TVD_11050 195a08a55b92515db36ab8c8e02a5ac1 343 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 53 341 6.6E-110 T 11-10-2018 IPR011757 Lytic transglycosylase MltB TVD_11050 195a08a55b92515db36ab8c8e02a5ac1 343 SUPERFAMILY SSF53955 49 342 1.67E-85 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TVD_11050 195a08a55b92515db36ab8c8e02a5ac1 343 Gene3D G3DSA:1.10.530.10 90 338 4.9E-109 T 11-10-2018 TVD_11050 195a08a55b92515db36ab8c8e02a5ac1 343 Pfam PF13406 Transglycosylase SLT domain 49 339 1.0E-95 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 TVD_11050 195a08a55b92515db36ab8c8e02a5ac1 343 Gene3D G3DSA:1.10.8.350 61 223 4.9E-109 T 11-10-2018 TVD_02160 d900f4866658aec71613487994b3d420 456 Gene3D G3DSA:3.40.1390.10 1 79 3.2E-17 T 11-10-2018 TVD_02160 d900f4866658aec71613487994b3d420 456 SUPERFAMILY SSF63418 1 95 5.89E-17 T 11-10-2018 IPR035911 MurE/MurF, N-terminal TVD_02160 d900f4866658aec71613487994b3d420 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 308 389 1.5E-13 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TVD_02160 d900f4866658aec71613487994b3d420 456 SUPERFAMILY SSF53244 308 440 2.13E-34 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TVD_02160 d900f4866658aec71613487994b3d420 456 Gene3D G3DSA:3.90.190.20 307 444 1.6E-38 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TVD_02160 d900f4866658aec71613487994b3d420 456 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 441 30.955 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_02160 d900f4866658aec71613487994b3d420 456 Pfam PF08245 Mur ligase middle domain 105 288 1.6E-40 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TVD_02160 d900f4866658aec71613487994b3d420 456 Gene3D G3DSA:3.40.1190.10 80 305 8.8E-65 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TVD_02160 d900f4866658aec71613487994b3d420 456 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 439 6.9E-118 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_02160 d900f4866658aec71613487994b3d420 456 SUPERFAMILY SSF53623 99 306 9.03E-50 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TVD_10940 638041093b42f6129c52ddfb754e4801 602 PRINTS PR00315 GTP-binding elongation factor signature 52 60 2.4E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_10940 638041093b42f6129c52ddfb754e4801 602 PRINTS PR00315 GTP-binding elongation factor signature 93 104 2.4E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_10940 638041093b42f6129c52ddfb754e4801 602 PRINTS PR00315 GTP-binding elongation factor signature 129 138 2.4E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_10940 638041093b42f6129c52ddfb754e4801 602 PRINTS PR00315 GTP-binding elongation factor signature 77 87 2.4E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_10940 638041093b42f6129c52ddfb754e4801 602 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.4E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_10940 638041093b42f6129c52ddfb754e4801 602 Hamap MF_00071 Elongation factor 4 [lepA]. 1 600 298.233 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 TVD_10940 638041093b42f6129c52ddfb754e4801 602 Gene3D G3DSA:3.30.70.870 289 370 3.1E-36 T 11-10-2018 TVD_10940 638041093b42f6129c52ddfb754e4801 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site TVD_10940 638041093b42f6129c52ddfb754e4801 602 Gene3D G3DSA:2.40.30.10 189 288 3.1E-30 T 11-10-2018 TVD_10940 638041093b42f6129c52ddfb754e4801 602 Gene3D G3DSA:3.30.70.3380 371 481 1.1E-40 T 11-10-2018 TVD_10940 638041093b42f6129c52ddfb754e4801 602 SUPERFAMILY SSF52540 6 208 2.78E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10940 638041093b42f6129c52ddfb754e4801 602 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 5.4E-50 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal TVD_10940 638041093b42f6129c52ddfb754e4801 602 SMART SM00838 401 489 6.6E-4 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TVD_10940 638041093b42f6129c52ddfb754e4801 602 Gene3D G3DSA:3.30.70.2570 482 556 1.7E-33 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily TVD_10940 638041093b42f6129c52ddfb754e4801 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 179 3.0E-18 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TVD_10940 638041093b42f6129c52ddfb754e4801 602 TIGRFAM TIGR01393 lepA: elongation factor 4 7 598 5.0E-296 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 TVD_10940 638041093b42f6129c52ddfb754e4801 602 SUPERFAMILY SSF50447 168 291 1.06E-28 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TVD_10940 638041093b42f6129c52ddfb754e4801 602 Pfam PF03144 Elongation factor Tu domain 2 208 278 1.3E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TVD_10940 638041093b42f6129c52ddfb754e4801 602 Gene3D G3DSA:3.40.50.300 3 188 1.7E-70 T 11-10-2018 TVD_10940 638041093b42f6129c52ddfb754e4801 602 Pfam PF00009 Elongation factor Tu GTP binding domain 7 184 4.8E-52 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_10940 638041093b42f6129c52ddfb754e4801 602 Pfam PF00679 Elongation factor G C-terminus 402 487 1.7E-20 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like TVD_10940 638041093b42f6129c52ddfb754e4801 602 SUPERFAMILY SSF54980 402 496 7.19E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like TVD_10940 638041093b42f6129c52ddfb754e4801 602 SUPERFAMILY SSF54980 295 373 3.38E-18 T 11-10-2018 IPR035647 EF-G domain III/V-like TVD_08135 eb3bef21dcee6deb69ec817a390ea812 416 Gene3D G3DSA:1.10.443.10 225 393 8.2E-18 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TVD_08135 eb3bef21dcee6deb69ec817a390ea812 416 Gene3D G3DSA:3.30.160.390 11 96 2.3E-15 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily TVD_08135 eb3bef21dcee6deb69ec817a390ea812 416 SUPERFAMILY SSF56349 108 390 8.83E-49 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TVD_08135 eb3bef21dcee6deb69ec817a390ea812 416 Pfam PF13356 Arm DNA-binding domain 12 95 2.7E-15 T 11-10-2018 IPR025166 Integrase, DNA-binding domain TVD_08135 eb3bef21dcee6deb69ec817a390ea812 416 Pfam PF00589 Phage integrase family 228 374 3.5E-12 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TVD_08135 eb3bef21dcee6deb69ec817a390ea812 416 Gene3D G3DSA:1.10.150.130 108 192 2.5E-30 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal TVD_10510 a0e6416433d998cc415163a26a452537 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 399 547 3.6E-46 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TVD_10510 a0e6416433d998cc415163a26a452537 572 Gene3D G3DSA:3.40.50.970 3 193 9.2E-71 T 11-10-2018 TVD_10510 a0e6416433d998cc415163a26a452537 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 176 2.0E-57 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TVD_10510 a0e6416433d998cc415163a26a452537 572 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 12 571 3.8E-260 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 TVD_10510 a0e6416433d998cc415163a26a452537 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 336 1.2E-43 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 TVD_10510 a0e6416433d998cc415163a26a452537 572 SUPERFAMILY SSF52467 193 367 7.12E-65 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TVD_10510 a0e6416433d998cc415163a26a452537 572 Gene3D G3DSA:3.40.50.970 368 570 2.0E-62 T 11-10-2018 TVD_10510 a0e6416433d998cc415163a26a452537 572 SUPERFAMILY SSF52518 377 570 1.73E-65 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TVD_10510 a0e6416433d998cc415163a26a452537 572 SUPERFAMILY SSF52518 10 190 5.89E-63 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TVD_10510 a0e6416433d998cc415163a26a452537 572 Gene3D G3DSA:3.40.50.1220 195 365 3.2E-60 T 11-10-2018 TVD_01070 aea03e200a02949fd8a964ebd27df2c4 528 Gene3D G3DSA:3.30.590.20 21 526 7.4E-178 T 11-10-2018 TVD_01070 aea03e200a02949fd8a964ebd27df2c4 528 Pfam PF04262 Glutamate-cysteine ligase 25 382 3.4E-149 T 11-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 TVD_01070 aea03e200a02949fd8a964ebd27df2c4 528 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 528 185.881 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 TVD_01070 aea03e200a02949fd8a964ebd27df2c4 528 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 27 519 2.6E-165 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 TVD_01070 aea03e200a02949fd8a964ebd27df2c4 528 SUPERFAMILY SSF55931 19 517 8.5E-173 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 TVD_12265 97567d046a8637588aad597845c92003 607 Gene3D G3DSA:3.10.20.310 135 222 3.4E-21 T 11-10-2018 TVD_12265 97567d046a8637588aad597845c92003 607 Pfam PF17243 POTRA domain TamA domain 1 58 133 3.0E-12 T 11-10-2018 IPR035243 TamA, POTRA domain 1 TVD_12265 97567d046a8637588aad597845c92003 607 Pfam PF01103 Surface antigen 339 604 2.0E-35 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 TVD_12265 97567d046a8637588aad597845c92003 607 Pfam PF07244 Surface antigen variable number repeat 158 207 5.4E-5 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 TVD_12265 97567d046a8637588aad597845c92003 607 Gene3D G3DSA:3.10.20.310 223 298 1.1E-22 T 11-10-2018 TVD_12265 97567d046a8637588aad597845c92003 607 Gene3D G3DSA:2.40.160.50 299 607 1.1E-96 T 11-10-2018 TVD_08750 6b06d0d961582a5797332d5b0539cb67 398 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 7 395 47.426 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TVD_08750 6b06d0d961582a5797332d5b0539cb67 398 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 59 382 4.8E-44 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TVD_08750 6b06d0d961582a5797332d5b0539cb67 398 PIRSF PIRSF001413 1 397 2.2E-147 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TVD_08750 6b06d0d961582a5797332d5b0539cb67 398 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 85 99 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TVD_08750 6b06d0d961582a5797332d5b0539cb67 398 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 12 393 1.9E-155 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TVD_08750 6b06d0d961582a5797332d5b0539cb67 398 SUPERFAMILY SSF53686 8 392 1.57E-129 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TVD_08750 6b06d0d961582a5797332d5b0539cb67 398 Gene3D G3DSA:3.40.50.1100 59 388 1.4E-156 T 11-10-2018 TVD_08750 6b06d0d961582a5797332d5b0539cb67 398 Gene3D G3DSA:3.40.50.1100 15 210 1.4E-156 T 11-10-2018 TVD_02945 7d05c5c37d8b9f146d2f682b9aa7427a 86 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 54 1.8E-5 T 11-10-2018 TVD_02945 7d05c5c37d8b9f146d2f682b9aa7427a 86 Gene3D G3DSA:3.40.1620.40 2 66 1.0E-19 T 11-10-2018 TVD_02945 7d05c5c37d8b9f146d2f682b9aa7427a 86 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 70 9.6E-12 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TVD_02945 7d05c5c37d8b9f146d2f682b9aa7427a 86 SUPERFAMILY SSF143120 1 82 1.83E-18 T 11-10-2018 IPR036165 YefM-like superfamily TVD_10445 82151fb6ffeeea8bb3349b8a30c39994 332 SMART SM00267 164 332 5.1E-58 T 11-10-2018 IPR000160 GGDEF domain TVD_10445 82151fb6ffeeea8bb3349b8a30c39994 332 Gene3D G3DSA:3.10.450.50 3 140 2.9E-15 T 11-10-2018 TVD_10445 82151fb6ffeeea8bb3349b8a30c39994 332 SUPERFAMILY SSF55073 180 330 3.14E-44 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_10445 82151fb6ffeeea8bb3349b8a30c39994 332 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 171 330 1.6E-45 T 11-10-2018 IPR000160 GGDEF domain TVD_10445 82151fb6ffeeea8bb3349b8a30c39994 332 Pfam PF00990 Diguanylate cyclase, GGDEF domain 175 328 4.9E-42 T 11-10-2018 IPR000160 GGDEF domain TVD_10445 82151fb6ffeeea8bb3349b8a30c39994 332 Gene3D G3DSA:3.30.70.270 161 331 2.5E-56 T 11-10-2018 TVD_10445 82151fb6ffeeea8bb3349b8a30c39994 332 SUPERFAMILY SSF54427 6 132 3.8E-14 T 11-10-2018 IPR032710 NTF2-like domain superfamily TVD_10445 82151fb6ffeeea8bb3349b8a30c39994 332 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 5 129 2.2E-9 T 11-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 TVD_10445 82151fb6ffeeea8bb3349b8a30c39994 332 Pfam PF13474 SnoaL-like domain 9 132 2.4E-21 T 11-10-2018 IPR037401 SnoaL-like domain TVD_11070 96726e0970fa08eb52f23249ad54b3e3 213 Hamap MF_00235 Adenylate kinase [adk]. 1 213 50.592 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TVD_11070 96726e0970fa08eb52f23249ad54b3e3 213 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 1.7E-77 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 TVD_11070 96726e0970fa08eb52f23249ad54b3e3 213 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TVD_11070 96726e0970fa08eb52f23249ad54b3e3 213 PRINTS PR00094 Adenylate kinase signature 4 17 6.9E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TVD_11070 96726e0970fa08eb52f23249ad54b3e3 213 PRINTS PR00094 Adenylate kinase signature 32 46 6.9E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TVD_11070 96726e0970fa08eb52f23249ad54b3e3 213 PRINTS PR00094 Adenylate kinase signature 81 97 6.9E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TVD_11070 96726e0970fa08eb52f23249ad54b3e3 213 PRINTS PR00094 Adenylate kinase signature 160 175 6.9E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TVD_11070 96726e0970fa08eb52f23249ad54b3e3 213 PRINTS PR00094 Adenylate kinase signature 177 191 6.9E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 TVD_11070 96726e0970fa08eb52f23249ad54b3e3 213 Gene3D G3DSA:3.40.50.300 1 213 9.6E-81 T 11-10-2018 TVD_11070 96726e0970fa08eb52f23249ad54b3e3 213 SUPERFAMILY SSF52540 1 212 7.44E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_11070 96726e0970fa08eb52f23249ad54b3e3 213 Pfam PF00406 Adenylate kinase 5 189 1.4E-58 T 11-10-2018 TVD_11070 96726e0970fa08eb52f23249ad54b3e3 213 Pfam PF05191 Adenylate kinase, active site lid 127 162 1.8E-12 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 TVD_01275 86a9b029bc94824cbb98cf2165451c94 386 Pfam PF01476 LysM domain 76 122 6.7E-13 T 11-10-2018 IPR018392 LysM domain TVD_01275 86a9b029bc94824cbb98cf2165451c94 386 Gene3D G3DSA:3.10.350.10 74 122 2.0E-13 T 11-10-2018 IPR036779 LysM domain superfamily TVD_01275 86a9b029bc94824cbb98cf2165451c94 386 SUPERFAMILY SSF54106 75 123 4.45E-7 T 11-10-2018 TVD_01275 86a9b029bc94824cbb98cf2165451c94 386 SMART SM00257 75 123 2.8E-4 T 11-10-2018 IPR018392 LysM domain TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 Gene3D G3DSA:3.40.50.300 132 310 3.0E-66 T 11-10-2018 TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 Pfam PF02954 Bacterial regulatory protein, Fis family 433 473 4.7E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 5 473 5.5E-217 T 11-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 SUPERFAMILY SSF52540 139 383 5.9E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 Gene3D G3DSA:1.10.8.60 311 384 3.2E-22 T 11-10-2018 TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 SUPERFAMILY SSF46689 401 476 1.3E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 Pfam PF00072 Response regulator receiver domain 5 115 4.2E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 SUPERFAMILY SSF52172 5 185 1.35E-37 T 11-10-2018 IPR011006 CheY-like superfamily TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 Pfam PF00158 Sigma-54 interaction domain 140 307 7.1E-71 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 SMART SM00382 160 303 9.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 SMART SM00448 3 115 6.6E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 Gene3D G3DSA:3.40.50.2300 2 123 4.1E-32 T 11-10-2018 TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 Gene3D G3DSA:1.10.10.60 385 476 2.4E-22 T 11-10-2018 TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 456 2.8E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_12985 9eeb4caf94b5121a73b148779778df2f 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 456 476 2.8E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TVD_08735 ec1383907430d44945addba200e948f9 331 SUPERFAMILY SSF51679 4 324 4.45E-85 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 TVD_08735 ec1383907430d44945addba200e948f9 331 Pfam PF00296 Luciferase-like monooxygenase 11 301 2.4E-36 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 TVD_08735 ec1383907430d44945addba200e948f9 331 Gene3D G3DSA:3.20.20.30 1 328 4.6E-99 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 TVD_08735 ec1383907430d44945addba200e948f9 331 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 324 1.4E-136 T 11-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 TVD_11745 1bce582ea67d4e7d96897b172b8ac872 228 Gene3D G3DSA:1.10.760.10 50 228 1.3E-55 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_11745 1bce582ea67d4e7d96897b172b8ac872 228 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 142 221 4.7E-25 T 11-10-2018 IPR030999 Sulfur oxidation c-type cytochrome SoxX TVD_11745 1bce582ea67d4e7d96897b172b8ac872 228 SUPERFAMILY SSF46626 109 220 8.39E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_11745 1bce582ea67d4e7d96897b172b8ac872 228 Pfam PF00034 Cytochrome c 143 220 2.0E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_03780 865a47821969d5f8a74346df6a1598f9 190 Pfam PF00293 NUDIX domain 56 162 7.5E-13 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TVD_03780 865a47821969d5f8a74346df6a1598f9 190 SUPERFAMILY SSF55811 39 185 2.17E-19 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TVD_03780 865a47821969d5f8a74346df6a1598f9 190 Gene3D G3DSA:3.90.79.10 4 188 7.0E-39 T 11-10-2018 TVD_04880 ddb2ba105a26865113b691029207fea6 136 Gene3D G3DSA:3.90.1010.10 1 134 1.6E-59 T 11-10-2018 TVD_04880 ddb2ba105a26865113b691029207fea6 136 SUPERFAMILY SSF82649 1 128 2.62E-50 T 11-10-2018 TVD_04880 ddb2ba105a26865113b691029207fea6 136 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.1E-70 T 11-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 TVD_04880 ddb2ba105a26865113b691029207fea6 136 Pfam PF01592 NifU-like N terminal domain 2 126 6.7E-58 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 TVD_01790 dd26725940bfaf483bd21a4eb408a3db 351 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 349 1.4E-143 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TVD_01790 dd26725940bfaf483bd21a4eb408a3db 351 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 23 32 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TVD_01790 dd26725940bfaf483bd21a4eb408a3db 351 SUPERFAMILY SSF51726 4 350 8.89E-123 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TVD_01790 dd26725940bfaf483bd21a4eb408a3db 351 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 7 350 51.188 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TVD_01790 dd26725940bfaf483bd21a4eb408a3db 351 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 10 347 5.5E-137 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TVD_01790 dd26725940bfaf483bd21a4eb408a3db 351 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 143 159 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 TVD_01790 dd26725940bfaf483bd21a4eb408a3db 351 Gene3D G3DSA:3.20.20.210 1 351 2.1E-160 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 TVD_01245 5c06d722f2981d3aefa1da6fef205ba8 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 306 325 2.4E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TVD_01245 5c06d722f2981d3aefa1da6fef205ba8 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 159 178 2.4E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TVD_01245 5c06d722f2981d3aefa1da6fef205ba8 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 251 267 2.4E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TVD_01245 5c06d722f2981d3aefa1da6fef205ba8 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 197 216 2.4E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TVD_01245 5c06d722f2981d3aefa1da6fef205ba8 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 276 291 2.4E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TVD_01245 5c06d722f2981d3aefa1da6fef205ba8 338 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 128 142 2.4E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TVD_01245 5c06d722f2981d3aefa1da6fef205ba8 338 PIRSF PIRSF001415 1 335 2.3E-146 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TVD_01245 5c06d722f2981d3aefa1da6fef205ba8 338 Gene3D G3DSA:3.20.20.70 2 336 9.7E-145 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_01245 5c06d722f2981d3aefa1da6fef205ba8 338 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 251 263 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TVD_01245 5c06d722f2981d3aefa1da6fef205ba8 338 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 331 1.9E-137 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TVD_01245 5c06d722f2981d3aefa1da6fef205ba8 338 SMART SM01004 8 332 5.5E-237 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 TVD_01245 5c06d722f2981d3aefa1da6fef205ba8 338 SUPERFAMILY SSF51569 6 334 1.44E-141 T 11-10-2018 TVD_03275 055acaa0939c2890ee8ff886814905cb 150 PRINTS PR01837 MgtC/SapB protein signature 70 92 8.9E-25 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TVD_03275 055acaa0939c2890ee8ff886814905cb 150 PRINTS PR01837 MgtC/SapB protein signature 97 121 8.9E-25 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TVD_03275 055acaa0939c2890ee8ff886814905cb 150 PRINTS PR01837 MgtC/SapB protein signature 24 43 8.9E-25 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TVD_03275 055acaa0939c2890ee8ff886814905cb 150 PRINTS PR01837 MgtC/SapB protein signature 43 61 8.9E-25 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TVD_03275 055acaa0939c2890ee8ff886814905cb 150 Pfam PF02308 MgtC family 21 142 2.0E-27 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TVD_08620 25234e96e57487fa4b866ed68a4a4019 115 SUPERFAMILY SSF52821 7 111 1.26E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_08620 25234e96e57487fa4b866ed68a4a4019 115 Pfam PF00581 Rhodanese-like domain 20 111 8.7E-15 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_08620 25234e96e57487fa4b866ed68a4a4019 115 Gene3D G3DSA:3.40.250.10 2 113 1.5E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_08620 25234e96e57487fa4b866ed68a4a4019 115 SMART SM00450 19 115 4.8E-17 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_06400 00f365807ca66e40b7cc600deaf9d8a9 426 Gene3D G3DSA:3.30.750.140 339 420 1.0E-5 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily TVD_06400 00f365807ca66e40b7cc600deaf9d8a9 426 Pfam PF02120 Flagellar hook-length control protein FliK 335 408 6.5E-14 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal TVD_08530 9ffe0c4e8047da8f9cc6214bbd983afe 158 Pfam PF01928 CYTH domain 3 142 3.9E-10 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 TVD_08530 9ffe0c4e8047da8f9cc6214bbd983afe 158 SMART SM01118 2 148 1.7E-13 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 TVD_08530 9ffe0c4e8047da8f9cc6214bbd983afe 158 PIRSF PIRSF016487 1 158 7.4E-54 T 11-10-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like TVD_08530 9ffe0c4e8047da8f9cc6214bbd983afe 158 Gene3D G3DSA:2.40.320.10 1 150 2.5E-42 T 11-10-2018 TVD_08530 9ffe0c4e8047da8f9cc6214bbd983afe 158 SUPERFAMILY SSF55154 1 148 3.43E-33 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 TVD_02885 ad7a8fd94955918d24cc982672294dd1 360 Pfam PF01544 CorA-like Mg2+ transporter protein 61 356 8.8E-73 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 TVD_02885 ad7a8fd94955918d24cc982672294dd1 360 SUPERFAMILY SSF143865 11 287 1.44E-71 T 11-10-2018 TVD_02885 ad7a8fd94955918d24cc982672294dd1 360 Gene3D G3DSA:1.20.58.340 164 276 3.6E-38 T 11-10-2018 TVD_02885 ad7a8fd94955918d24cc982672294dd1 360 Gene3D G3DSA:1.20.58.340 277 360 2.0E-32 T 11-10-2018 TVD_02885 ad7a8fd94955918d24cc982672294dd1 360 Gene3D G3DSA:3.30.460.20 5 163 1.6E-27 T 11-10-2018 TVD_02885 ad7a8fd94955918d24cc982672294dd1 360 SUPERFAMILY SSF144083 290 357 9.55E-19 T 11-10-2018 TVD_02885 ad7a8fd94955918d24cc982672294dd1 360 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 53 360 1.4E-85 T 11-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 TVD_00750 2e9d6898fede6343ae0cecbda918ae89 307 Pfam PF00850 Histone deacetylase domain 20 304 2.2E-76 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TVD_00750 2e9d6898fede6343ae0cecbda918ae89 307 SUPERFAMILY SSF52768 2 305 2.01E-96 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily TVD_00750 2e9d6898fede6343ae0cecbda918ae89 307 Gene3D G3DSA:3.40.800.20 1 307 3.6E-110 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TVD_00750 2e9d6898fede6343ae0cecbda918ae89 307 PRINTS PR01270 Histone deacetylase superfamily signature 234 244 7.3E-18 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TVD_00750 2e9d6898fede6343ae0cecbda918ae89 307 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 7.3E-18 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TVD_00750 2e9d6898fede6343ae0cecbda918ae89 307 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 7.3E-18 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TVD_05465 ed8271e79c3a84b60ab0edfeee6758d8 118 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 10 108 3.5E-13 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TVD_05465 ed8271e79c3a84b60ab0edfeee6758d8 118 Gene3D G3DSA:3.30.2310.20 3 114 7.2E-20 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_07420 19c460059ab90ff5c566cc5f3aaba1d2 229 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 26 222 2.3E-42 T 11-10-2018 IPR006214 Bax inhibitor 1-related TVD_06655 f357b38720b3ef0d5ad765ceed950d7a 347 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 14 293 8.3E-67 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TVD_06655 f357b38720b3ef0d5ad765ceed950d7a 347 SUPERFAMILY SSF51445 11 307 4.11E-77 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TVD_06655 f357b38720b3ef0d5ad765ceed950d7a 347 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 11 346 47.438 T 11-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 TVD_06655 f357b38720b3ef0d5ad765ceed950d7a 347 Gene3D G3DSA:3.20.20.300 4 339 1.1E-109 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 TVD_01910 257654804ff8bbcc76847345cc6047cc 325 Pfam PF01699 Sodium/calcium exchanger protein 179 319 5.0E-32 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 TVD_01910 257654804ff8bbcc76847345cc6047cc 325 Pfam PF01699 Sodium/calcium exchanger protein 5 142 2.2E-26 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 TVD_01910 257654804ff8bbcc76847345cc6047cc 325 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 4 315 2.8E-79 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 TVD_01910 257654804ff8bbcc76847345cc6047cc 325 Gene3D G3DSA:1.20.1420.30 35 312 3.4E-90 T 11-10-2018 TVD_01910 257654804ff8bbcc76847345cc6047cc 325 Gene3D G3DSA:1.20.58.1130 9 210 3.4E-90 T 11-10-2018 TVD_08035 2d89de599259ac26dfd78dbef7776acf 84 Gene3D G3DSA:1.10.150.250 1 82 2.9E-25 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily TVD_08035 2d89de599259ac26dfd78dbef7776acf 84 SUPERFAMILY SSF109910 5 75 1.07E-18 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily TVD_08035 2d89de599259ac26dfd78dbef7776acf 84 Pfam PF03937 Flavinator of succinate dehydrogenase 5 64 1.3E-21 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase TVD_07070 5458d4ae55703a5b82bf56e9615cc9f9 188 SUPERFAMILY SSF53254 7 183 6.21E-46 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TVD_07070 5458d4ae55703a5b82bf56e9615cc9f9 188 SMART SM00855 7 156 3.0E-12 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TVD_07070 5458d4ae55703a5b82bf56e9615cc9f9 188 Gene3D G3DSA:3.40.50.1240 2 185 6.7E-44 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TVD_07070 5458d4ae55703a5b82bf56e9615cc9f9 188 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 10 182 1.1E-41 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TVD_07070 5458d4ae55703a5b82bf56e9615cc9f9 188 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 10 19 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 TVD_07070 5458d4ae55703a5b82bf56e9615cc9f9 188 PIRSF PIRSF000709 1 188 1.4E-7 T 11-10-2018 TVD_06565 63433a12166a1bec62697f9b6b3b1662 106 SUPERFAMILY SSF141255 5 93 1.22E-31 T 11-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 TVD_06565 63433a12166a1bec62697f9b6b3b1662 106 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 6 98 5.0E-30 T 11-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 TVD_06565 63433a12166a1bec62697f9b6b3b1662 106 SMART SM00992 4 100 2.1E-37 T 11-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 TVD_06565 63433a12166a1bec62697f9b6b3b1662 106 Gene3D G3DSA:2.30.30.390 2 100 1.5E-34 T 11-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 TVD_06565 63433a12166a1bec62697f9b6b3b1662 106 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 6 94 4.1E-25 T 11-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 TVD_08585 0a8d185da6cc3b9c5c1e70c6a377b056 147 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 8 144 9.475 T 11-10-2018 IPR022907 VapC family GO:0004540 TVD_08585 0a8d185da6cc3b9c5c1e70c6a377b056 147 SUPERFAMILY SSF88723 8 144 1.96E-19 T 11-10-2018 IPR029060 PIN-like domain superfamily TVD_08585 0a8d185da6cc3b9c5c1e70c6a377b056 147 Pfam PF01850 PIN domain 9 136 1.2E-20 T 11-10-2018 IPR002716 PIN domain TVD_08585 0a8d185da6cc3b9c5c1e70c6a377b056 147 Gene3D G3DSA:3.40.50.1010 8 137 5.0E-22 T 11-10-2018 TVD_02155 8c454bea02cc64ccaafe744d1debd26d 513 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 13 494 31.09 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 TVD_02155 8c454bea02cc64ccaafe744d1debd26d 513 Pfam PF02875 Mur ligase family, glutamate ligase domain 342 426 7.8E-21 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TVD_02155 8c454bea02cc64ccaafe744d1debd26d 513 SUPERFAMILY SSF53623 115 341 3.05E-67 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TVD_02155 8c454bea02cc64ccaafe744d1debd26d 513 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 32 491 4.3E-140 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 TVD_02155 8c454bea02cc64ccaafe744d1debd26d 513 Gene3D G3DSA:3.40.1390.10 19 110 2.7E-18 T 11-10-2018 TVD_02155 8c454bea02cc64ccaafe744d1debd26d 513 SUPERFAMILY SSF63418 26 108 5.89E-16 T 11-10-2018 IPR035911 MurE/MurF, N-terminal TVD_02155 8c454bea02cc64ccaafe744d1debd26d 513 Pfam PF01225 Mur ligase family, catalytic domain 39 96 2.8E-5 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TVD_02155 8c454bea02cc64ccaafe744d1debd26d 513 Gene3D G3DSA:3.90.190.20 345 497 1.9E-55 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TVD_02155 8c454bea02cc64ccaafe744d1debd26d 513 Gene3D G3DSA:3.40.1190.10 113 344 6.9E-70 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TVD_02155 8c454bea02cc64ccaafe744d1debd26d 513 SUPERFAMILY SSF53244 342 492 1.37E-48 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TVD_02155 8c454bea02cc64ccaafe744d1debd26d 513 Pfam PF08245 Mur ligase middle domain 120 321 7.5E-43 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TVD_12050 0defc8bea86445f33d501542305ac6db 887 SUPERFAMILY SSF52518 58 468 7.07E-140 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TVD_12050 0defc8bea86445f33d501542305ac6db 887 Gene3D G3DSA:3.40.50.970 472 705 7.2E-112 T 11-10-2018 TVD_12050 0defc8bea86445f33d501542305ac6db 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 80 293 1.5E-6 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 TVD_12050 0defc8bea86445f33d501542305ac6db 887 Gene3D G3DSA:3.40.50.920 706 887 2.9E-76 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TVD_12050 0defc8bea86445f33d501542305ac6db 887 PIRSF PIRSF000156 1 887 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 TVD_12050 0defc8bea86445f33d501542305ac6db 887 SUPERFAMILY SSF52922 701 885 2.14E-60 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 TVD_12050 0defc8bea86445f33d501542305ac6db 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 7 886 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 TVD_12050 0defc8bea86445f33d501542305ac6db 887 Gene3D G3DSA:3.40.50.970 57 471 1.2E-134 T 11-10-2018 TVD_12050 0defc8bea86445f33d501542305ac6db 887 SUPERFAMILY SSF52518 472 700 3.06E-99 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold TVD_09245 5c6dbca53cae0543cc7c725bfe57eccc 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.1E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 TVD_09245 5c6dbca53cae0543cc7c725bfe57eccc 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.1E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 TVD_09245 5c6dbca53cae0543cc7c725bfe57eccc 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.1E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 TVD_09245 5c6dbca53cae0543cc7c725bfe57eccc 107 Pfam PF00037 4Fe-4S binding domain 35 55 6.3E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TVD_09245 5c6dbca53cae0543cc7c725bfe57eccc 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 9.6E-23 T 11-10-2018 IPR022569 Ferredoxin, C-terminal TVD_09245 5c6dbca53cae0543cc7c725bfe57eccc 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_09245 5c6dbca53cae0543cc7c725bfe57eccc 107 SUPERFAMILY SSF54862 3 95 5.39E-24 T 11-10-2018 TVD_09245 5c6dbca53cae0543cc7c725bfe57eccc 107 Gene3D G3DSA:3.30.70.20 2 100 1.1E-30 T 11-10-2018 TVD_09625 e0d51ad1674040b65be24df0faf10e58 108 Gene3D G3DSA:1.10.760.10 44 105 1.8E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_09625 e0d51ad1674040b65be24df0faf10e58 108 SUPERFAMILY SSF46626 45 105 2.53E-8 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_08050 1721ccdb553166059e48f22923cfac08 591 PIRSF PIRSF000171 1 580 1.1E-51 T 11-10-2018 TVD_08050 1721ccdb553166059e48f22923cfac08 591 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08050 1721ccdb553166059e48f22923cfac08 591 SUPERFAMILY SSF51905 6 438 9.84E-78 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_08050 1721ccdb553166059e48f22923cfac08 591 Gene3D G3DSA:3.50.50.60 9 415 1.2E-165 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_08050 1721ccdb553166059e48f22923cfac08 591 Pfam PF02910 Fumarate reductase flavoprotein C-term 464 591 3.1E-39 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08050 1721ccdb553166059e48f22923cfac08 591 SUPERFAMILY SSF46977 457 591 8.24E-47 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08050 1721ccdb553166059e48f22923cfac08 591 SUPERFAMILY SSF56425 236 354 7.33E-43 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08050 1721ccdb553166059e48f22923cfac08 591 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 591 1.1E-237 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08050 1721ccdb553166059e48f22923cfac08 591 Gene3D G3DSA:3.90.700.10 246 349 1.2E-165 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08050 1721ccdb553166059e48f22923cfac08 591 Pfam PF00890 FAD binding domain 9 404 4.2E-115 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08050 1721ccdb553166059e48f22923cfac08 591 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 591 1.3E-266 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08050 1721ccdb553166059e48f22923cfac08 591 Gene3D G3DSA:1.20.58.100 431 550 3.0E-34 T 11-10-2018 TVD_08050 1721ccdb553166059e48f22923cfac08 591 Gene3D G3DSA:4.10.80.40 551 591 3.7E-10 T 11-10-2018 TVD_03415 d1ce71efe184d2fa3fe1839d6694fa67 266 Gene3D G3DSA:3.40.50.300 2 264 3.8E-65 T 11-10-2018 TVD_03415 d1ce71efe184d2fa3fe1839d6694fa67 266 Pfam PF00005 ABC transporter 24 166 1.4E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_03415 d1ce71efe184d2fa3fe1839d6694fa67 266 SMART SM00382 33 216 1.1E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_03415 d1ce71efe184d2fa3fe1839d6694fa67 266 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_03415 d1ce71efe184d2fa3fe1839d6694fa67 266 SUPERFAMILY SSF52540 5 233 1.24E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_03415 d1ce71efe184d2fa3fe1839d6694fa67 266 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 1.8E-107 T 11-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 TVD_00165 fbd67e06741ab3c2d1a0e260a29fffc7 162 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 150 1.7E-64 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TVD_00165 fbd67e06741ab3c2d1a0e260a29fffc7 162 Gene3D G3DSA:3.30.70.640 1 159 3.0E-68 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TVD_00165 fbd67e06741ab3c2d1a0e260a29fffc7 162 SUPERFAMILY SSF55040 11 153 3.14E-59 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TVD_00165 fbd67e06741ab3c2d1a0e260a29fffc7 162 Pfam PF01967 MoaC family 15 148 2.5E-55 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TVD_00165 fbd67e06741ab3c2d1a0e260a29fffc7 162 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 156 35.531 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 TVD_07920 0d6f4e765d686d0bc6d78c64e6520d5e 312 SMART SM00260 17 156 1.2E-21 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_07920 0d6f4e765d686d0bc6d78c64e6520d5e 312 Pfam PF01584 CheW-like domain 21 157 4.7E-32 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_07920 0d6f4e765d686d0bc6d78c64e6520d5e 312 Gene3D G3DSA:2.40.50.180 39 156 3.7E-27 T 11-10-2018 TVD_07920 0d6f4e765d686d0bc6d78c64e6520d5e 312 SUPERFAMILY SSF52172 177 305 2.42E-26 T 11-10-2018 IPR011006 CheY-like superfamily TVD_07920 0d6f4e765d686d0bc6d78c64e6520d5e 312 Gene3D G3DSA:2.30.30.40 24 150 3.7E-27 T 11-10-2018 TVD_07920 0d6f4e765d686d0bc6d78c64e6520d5e 312 SMART SM00448 180 300 6.2E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_07920 0d6f4e765d686d0bc6d78c64e6520d5e 312 SUPERFAMILY SSF50341 16 159 1.12E-32 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TVD_07920 0d6f4e765d686d0bc6d78c64e6520d5e 312 Gene3D G3DSA:3.40.50.2300 169 305 1.3E-27 T 11-10-2018 TVD_07920 0d6f4e765d686d0bc6d78c64e6520d5e 312 Pfam PF00072 Response regulator receiver domain 182 300 1.6E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_07920 0d6f4e765d686d0bc6d78c64e6520d5e 312 PIRSF PIRSF002867 1 306 5.4E-101 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV TVD_00910 502f341f13db4f7d5b1ab5b436ba129b 457 SUPERFAMILY SSF52172 10 133 1.71E-27 T 11-10-2018 IPR011006 CheY-like superfamily TVD_00910 502f341f13db4f7d5b1ab5b436ba129b 457 Gene3D G3DSA:3.40.50.2300 3 132 1.6E-26 T 11-10-2018 TVD_00910 502f341f13db4f7d5b1ab5b436ba129b 457 SMART SM00448 11 127 5.5E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_00910 502f341f13db4f7d5b1ab5b436ba129b 457 Pfam PF00072 Response regulator receiver domain 13 127 3.2E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_09450 9619268cec28dd42175c32dbd4d3f960 97 Gene3D G3DSA:3.30.70.1710 3 91 4.0E-34 T 11-10-2018 TVD_09450 9619268cec28dd42175c32dbd4d3f960 97 SUPERFAMILY SSF143414 9 94 1.83E-26 T 11-10-2018 IPR037233 CcmK-like superfamily TVD_09450 9619268cec28dd42175c32dbd4d3f960 97 Pfam PF00936 BMC domain 9 84 7.7E-24 T 11-10-2018 IPR000249 Microcompartment protein, bacteria TVD_09450 9619268cec28dd42175c32dbd4d3f960 97 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 9 70 1.0E-27 T 11-10-2018 TVD_09450 9619268cec28dd42175c32dbd4d3f960 97 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 26 45 - T 11-10-2018 IPR020808 Bacterial microcompartments protein, conserved site TVD_09450 9619268cec28dd42175c32dbd4d3f960 97 SMART SM00877 8 85 8.0E-28 T 11-10-2018 IPR000249 Microcompartment protein, bacteria TVD_00625 5cb4e18ec83a62b029300405c9b05d6b 273 Gene3D G3DSA:3.40.50.150 75 272 8.6E-69 T 11-10-2018 TVD_00625 5cb4e18ec83a62b029300405c9b05d6b 273 PIRSF PIRSF000410 2 272 5.4E-102 T 11-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR TVD_00625 5cb4e18ec83a62b029300405c9b05d6b 273 Pfam PF03705 CheR methyltransferase, all-alpha domain 11 59 1.9E-12 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal TVD_00625 5cb4e18ec83a62b029300405c9b05d6b 273 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 267 9.0E-66 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal TVD_00625 5cb4e18ec83a62b029300405c9b05d6b 273 SUPERFAMILY SSF47757 7 75 1.09E-17 T 11-10-2018 TVD_00625 5cb4e18ec83a62b029300405c9b05d6b 273 Gene3D G3DSA:1.10.155.10 2 74 9.8E-23 T 11-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily TVD_00625 5cb4e18ec83a62b029300405c9b05d6b 273 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 1.1E-47 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_00625 5cb4e18ec83a62b029300405c9b05d6b 273 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 1.1E-47 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_00625 5cb4e18ec83a62b029300405c9b05d6b 273 PRINTS PR00996 Glutamate methyltransferase family signature 108 128 1.1E-47 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_00625 5cb4e18ec83a62b029300405c9b05d6b 273 PRINTS PR00996 Glutamate methyltransferase family signature 141 157 1.1E-47 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_00625 5cb4e18ec83a62b029300405c9b05d6b 273 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 1.1E-47 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_00625 5cb4e18ec83a62b029300405c9b05d6b 273 PRINTS PR00996 Glutamate methyltransferase family signature 31 44 1.1E-47 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_00625 5cb4e18ec83a62b029300405c9b05d6b 273 SUPERFAMILY SSF53335 76 269 3.79E-59 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_00625 5cb4e18ec83a62b029300405c9b05d6b 273 SMART SM00138 9 272 3.4E-108 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TVD_10275 d7e39c66e0d65b041bbba54aa333fb06 404 Gene3D G3DSA:3.20.20.450 2 198 1.5E-18 T 11-10-2018 IPR035919 EAL domain superfamily TVD_10275 d7e39c66e0d65b041bbba54aa333fb06 404 PIRSF PIRSF003180 1 400 4.7E-91 T 11-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing TVD_10275 d7e39c66e0d65b041bbba54aa333fb06 404 Pfam PF00563 EAL domain 50 189 3.6E-13 T 11-10-2018 IPR001633 EAL domain TVD_10275 d7e39c66e0d65b041bbba54aa333fb06 404 SMART SM00052 2 196 1.1E-4 T 11-10-2018 IPR001633 EAL domain TVD_10275 d7e39c66e0d65b041bbba54aa333fb06 404 Pfam PF08668 HDOD domain 201 320 1.8E-15 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD TVD_10275 d7e39c66e0d65b041bbba54aa333fb06 404 SUPERFAMILY SSF141868 4 195 3.14E-27 T 11-10-2018 IPR035919 EAL domain superfamily TVD_10275 d7e39c66e0d65b041bbba54aa333fb06 404 SUPERFAMILY SSF109604 182 383 9.1E-31 T 11-10-2018 TVD_10275 d7e39c66e0d65b041bbba54aa333fb06 404 Gene3D G3DSA:1.10.3210.10 199 351 5.5E-26 T 11-10-2018 TVD_04410 ac7ab84ba700ada3e3b32f9850a45046 194 SUPERFAMILY SSF81342 9 192 1.26E-29 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 TVD_04410 ac7ab84ba700ada3e3b32f9850a45046 194 Pfam PF01292 Prokaryotic cytochrome b561 12 190 5.2E-27 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 TVD_13740 50a9641050e715f3f50c8c645c3fc917 252 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 12 241 4.4E-19 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TVD_13740 50a9641050e715f3f50c8c645c3fc917 252 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 246 1.8E-67 T 11-10-2018 TVD_13740 50a9641050e715f3f50c8c645c3fc917 252 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 23 32 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 TVD_13740 50a9641050e715f3f50c8c645c3fc917 252 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 248 7.5E-75 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 TVD_13740 50a9641050e715f3f50c8c645c3fc917 252 SUPERFAMILY SSF56219 2 249 4.06E-71 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TVD_13740 50a9641050e715f3f50c8c645c3fc917 252 Gene3D G3DSA:3.60.10.10 1 251 4.8E-78 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TVD_00400 d278501a2c64dc410f2435de54e931e2 295 SUPERFAMILY SSF53474 4 287 5.64E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_00400 d278501a2c64dc410f2435de54e931e2 295 TIGRFAM TIGR03100 hydr1_PEP: exosortase A system-associated hydrolase 1 3 287 4.1E-99 T 11-10-2018 IPR017531 Hydrolase, ortholog 1, exosortase system type 1 associated TVD_00400 d278501a2c64dc410f2435de54e931e2 295 Pfam PF12146 Serine aminopeptidase, S33 46 148 9.6E-13 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 TVD_12140 5e199f6e3029035399c6b00b182d2f40 477 SUPERFAMILY SSF89095 297 402 4.84E-35 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 TVD_12140 5e199f6e3029035399c6b00b182d2f40 477 Pfam PF02637 GatB domain 328 475 2.3E-53 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 TVD_12140 5e199f6e3029035399c6b00b182d2f40 477 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 475 2.8E-178 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 TVD_12140 5e199f6e3029035399c6b00b182d2f40 477 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 144 158 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 TVD_12140 5e199f6e3029035399c6b00b182d2f40 477 Pfam PF02934 GatB/GatE catalytic domain 5 288 2.0E-112 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 TVD_12140 5e199f6e3029035399c6b00b182d2f40 477 Gene3D G3DSA:1.10.10.410 415 477 1.1E-26 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal TVD_12140 5e199f6e3029035399c6b00b182d2f40 477 Gene3D G3DSA:1.10.150.380 300 413 8.1E-34 T 11-10-2018 TVD_12140 5e199f6e3029035399c6b00b182d2f40 477 SMART SM00845 328 475 5.2E-82 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 TVD_12140 5e199f6e3029035399c6b00b182d2f40 477 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 476 39.164 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 TVD_12140 5e199f6e3029035399c6b00b182d2f40 477 SUPERFAMILY SSF55931 4 296 2.75E-120 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 TVD_07975 bd27e805baefdd8b264dbafd16f01905 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 3.8E-26 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TVD_07975 bd27e805baefdd8b264dbafd16f01905 65 SUPERFAMILY SSF143034 2 64 9.55E-24 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_07975 bd27e805baefdd8b264dbafd16f01905 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.6E-20 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TVD_07975 bd27e805baefdd8b264dbafd16f01905 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.6E-20 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TVD_07975 bd27e805baefdd8b264dbafd16f01905 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.6E-20 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TVD_07975 bd27e805baefdd8b264dbafd16f01905 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.84 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TVD_07975 bd27e805baefdd8b264dbafd16f01905 65 Pfam PF01632 Ribosomal protein L35 2 62 8.7E-26 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_07975 bd27e805baefdd8b264dbafd16f01905 65 Gene3D G3DSA:2.40.50.530 1 65 6.1E-23 T 11-10-2018 TVD_07975 bd27e805baefdd8b264dbafd16f01905 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_09660 9aba2b3974aa00ff0a9c6917434b91ab 204 Pfam PF01300 Telomere recombination 20 195 2.5E-41 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 TVD_09660 9aba2b3974aa00ff0a9c6917434b91ab 204 Gene3D G3DSA:3.90.870.10 1 201 1.3E-58 T 11-10-2018 TVD_09660 9aba2b3974aa00ff0a9c6917434b91ab 204 SUPERFAMILY SSF55821 2 200 8.24E-58 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TVD_09660 9aba2b3974aa00ff0a9c6917434b91ab 204 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 197 3.7E-54 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 TVD_05445 63dd433ffa2a3d46b78f547db955e937 152 Pfam PF03073 TspO/MBR family 7 150 7.3E-45 T 11-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 TVD_05445 63dd433ffa2a3d46b78f547db955e937 152 PIRSF PIRSF005859 1 152 3.9E-46 T 11-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 TVD_05445 63dd433ffa2a3d46b78f547db955e937 152 Gene3D G3DSA:1.20.1260.100 3 152 1.2E-48 T 11-10-2018 IPR038330 TspO/MBR-related superfamily TVD_01155 e776b17f879211bf321054f42023a46a 324 Pfam PF00753 Metallo-beta-lactamase superfamily 66 250 2.0E-25 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_01155 e776b17f879211bf321054f42023a46a 324 Gene3D G3DSA:3.60.15.10 38 268 4.1E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_01155 e776b17f879211bf321054f42023a46a 324 SMART SM00849 66 250 2.9E-23 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_01155 e776b17f879211bf321054f42023a46a 324 SUPERFAMILY SSF56281 9 293 1.32E-64 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_11460 89a9f2e1846cf753c53a5f3ffca0316e 161 Gene3D G3DSA:3.40.50.300 6 146 1.1E-37 T 11-10-2018 TVD_11460 89a9f2e1846cf753c53a5f3ffca0316e 161 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 12 131 9.1E-35 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 TVD_11460 89a9f2e1846cf753c53a5f3ffca0316e 161 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 11 131 1.3E-36 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 TVD_11460 89a9f2e1846cf753c53a5f3ffca0316e 161 SUPERFAMILY SSF52540 26 141 2.08E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10140 dccabbf07e9ef6fedf813547fdad9342 343 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 32 255 5.6E-39 T 11-10-2018 IPR018642 Protein of unknown function DUF2066 TVD_08555 e56e4dcb67e11a0c8fa878951f70b184 472 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 2 443 1.5E-189 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 TVD_08555 e56e4dcb67e11a0c8fa878951f70b184 472 SUPERFAMILY SSF56059 82 347 7.07E-65 T 11-10-2018 TVD_08555 e56e4dcb67e11a0c8fa878951f70b184 472 SMART SM00878 335 441 3.1E-59 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TVD_08555 e56e4dcb67e11a0c8fa878951f70b184 472 SUPERFAMILY SSF51246 330 447 8.37E-42 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TVD_08555 e56e4dcb67e11a0c8fa878951f70b184 472 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 7.4E-42 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TVD_08555 e56e4dcb67e11a0c8fa878951f70b184 472 Pfam PF02785 Biotin carboxylase C-terminal domain 335 441 4.1E-38 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TVD_08555 e56e4dcb67e11a0c8fa878951f70b184 472 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TVD_08555 e56e4dcb67e11a0c8fa878951f70b184 472 SUPERFAMILY SSF52440 2 112 1.51E-44 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TVD_08555 e56e4dcb67e11a0c8fa878951f70b184 472 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TVD_08555 e56e4dcb67e11a0c8fa878951f70b184 472 Gene3D G3DSA:3.30.470.130 1 449 3.3E-191 T 11-10-2018 TVD_08555 e56e4dcb67e11a0c8fa878951f70b184 472 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 321 1.3E-75 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TVD_05745 17aa436363453d33072e8dfb72f23446 380 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 344 1.8E-71 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TVD_05745 17aa436363453d33072e8dfb72f23446 380 Gene3D G3DSA:3.40.50.1100 65 161 1.5E-119 T 11-10-2018 TVD_05745 17aa436363453d33072e8dfb72f23446 380 SUPERFAMILY SSF53686 8 375 4.06E-104 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TVD_05745 17aa436363453d33072e8dfb72f23446 380 PIRSF PIRSF038945 1 377 7.0E-158 T 11-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 TVD_05745 17aa436363453d33072e8dfb72f23446 380 TIGRFAM TIGR00260 thrC: threonine synthase 11 351 5.5E-92 T 11-10-2018 IPR004450 Threonine synthase-like TVD_05745 17aa436363453d33072e8dfb72f23446 380 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 57 70 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 TVD_05745 17aa436363453d33072e8dfb72f23446 380 Gene3D G3DSA:3.40.50.1100 13 350 1.5E-119 T 11-10-2018 TVD_11435 82c168ac5a7d351d7be4797f86884c6d 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 207 227 1.0E-8 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_11435 82c168ac5a7d351d7be4797f86884c6d 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 274 292 1.0E-8 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_11435 82c168ac5a7d351d7be4797f86884c6d 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.0E-8 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_11435 82c168ac5a7d351d7be4797f86884c6d 446 Pfam PF01926 50S ribosome-binding GTPase 207 325 2.0E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_11435 82c168ac5a7d351d7be4797f86884c6d 446 PIRSF PIRSF006809 10 427 1.2E-145 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 TVD_11435 82c168ac5a7d351d7be4797f86884c6d 446 Hamap MF_00900 GTPase HflX [hflX]. 34 397 47.594 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 TVD_11435 82c168ac5a7d351d7be4797f86884c6d 446 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 17 367 1.7E-150 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 TVD_11435 82c168ac5a7d351d7be4797f86884c6d 446 Pfam PF16360 GTP-binding GTPase Middle Region 121 199 1.3E-28 T 11-10-2018 IPR032305 GTP-binding protein, middle domain TVD_11435 82c168ac5a7d351d7be4797f86884c6d 446 Gene3D G3DSA:3.40.50.300 204 374 3.4E-40 T 11-10-2018 TVD_11435 82c168ac5a7d351d7be4797f86884c6d 446 Pfam PF13167 GTP-binding GTPase N-terminal 32 119 1.9E-29 T 11-10-2018 IPR025121 GTPase HflX, N-terminal TVD_11435 82c168ac5a7d351d7be4797f86884c6d 446 Gene3D G3DSA:3.40.50.11060 24 145 7.3E-37 T 11-10-2018 TVD_11435 82c168ac5a7d351d7be4797f86884c6d 446 SUPERFAMILY SSF52540 204 374 2.51E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_09535 cf8ae82df0faf3763176b4a52fd6bccc 345 SUPERFAMILY SSF53335 65 335 7.98E-59 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_09535 cf8ae82df0faf3763176b4a52fd6bccc 345 Pfam PF02353 Mycolic acid cyclopropane synthetase 64 326 2.5E-42 T 11-10-2018 TVD_09535 cf8ae82df0faf3763176b4a52fd6bccc 345 Gene3D G3DSA:3.40.50.150 57 337 2.7E-74 T 11-10-2018 TVD_12190 b6cbed40df1c0d72b832701ebe7b3c55 287 PIRSF PIRSF026649 1 285 9.6E-87 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 TVD_12190 b6cbed40df1c0d72b832701ebe7b3c55 287 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 1 279 1.3E-90 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 TVD_12190 b6cbed40df1c0d72b832701ebe7b3c55 287 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 2 277 1.2E-71 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 TVD_09965 f6162f460ac65263e1948ce53c2d3965 395 SUPERFAMILY SSF51905 11 386 2.42E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_09965 f6162f460ac65263e1948ce53c2d3965 395 Gene3D G3DSA:3.30.9.50 85 274 2.0E-100 T 11-10-2018 TVD_09965 f6162f460ac65263e1948ce53c2d3965 395 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 299 312 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 TVD_09965 f6162f460ac65263e1948ce53c2d3965 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 161 176 1.3E-20 T 11-10-2018 TVD_09965 f6162f460ac65263e1948ce53c2d3965 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 1.3E-20 T 11-10-2018 TVD_09965 f6162f460ac65263e1948ce53c2d3965 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 1.3E-20 T 11-10-2018 TVD_09965 f6162f460ac65263e1948ce53c2d3965 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 11 33 1.3E-20 T 11-10-2018 TVD_09965 f6162f460ac65263e1948ce53c2d3965 395 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 11 391 6.1E-112 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 TVD_09965 f6162f460ac65263e1948ce53c2d3965 395 Gene3D G3DSA:3.50.50.60 11 341 2.0E-100 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_09965 f6162f460ac65263e1948ce53c2d3965 395 Pfam PF01494 FAD binding domain 11 343 1.0E-33 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 TVD_02215 9a09582431a123b5ef1a9d8b00df7901 283 SUPERFAMILY SSF54211 111 254 6.9E-51 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_02215 9a09582431a123b5ef1a9d8b00df7901 283 Gene3D G3DSA:3.30.230.20 1 104 5.7E-39 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 TVD_02215 9a09582431a123b5ef1a9d8b00df7901 283 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 3 252 9.5E-98 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 TVD_02215 9a09582431a123b5ef1a9d8b00df7901 283 SUPERFAMILY SSF54211 1 102 1.14E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_02215 9a09582431a123b5ef1a9d8b00df7901 283 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 1 256 37.887 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 TVD_02215 9a09582431a123b5ef1a9d8b00df7901 283 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1 269 2.0E-110 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 TVD_02215 9a09582431a123b5ef1a9d8b00df7901 283 Gene3D G3DSA:3.30.1700.10 105 278 3.2E-66 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 TVD_04480 d6344ee27ba3ad83014d993950d3512a 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 3.7E-13 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_04480 d6344ee27ba3ad83014d993950d3512a 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 3.7E-13 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_04480 d6344ee27ba3ad83014d993950d3512a 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 3.7E-13 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_04480 d6344ee27ba3ad83014d993950d3512a 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 3.7E-13 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_04480 d6344ee27ba3ad83014d993950d3512a 501 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 3.7E-13 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_04480 d6344ee27ba3ad83014d993950d3512a 501 Pfam PF00361 Proton-conducting membrane transporter 128 417 7.5E-53 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_04190 4a58da9f4e11fc23b012c0fd99ca4b21 410 Gene3D G3DSA:3.40.50.2000 218 379 6.4E-38 T 11-10-2018 TVD_04190 4a58da9f4e11fc23b012c0fd99ca4b21 410 Pfam PF13692 Glycosyl transferases group 1 223 361 8.2E-27 T 11-10-2018 TVD_04190 4a58da9f4e11fc23b012c0fd99ca4b21 410 SUPERFAMILY SSF53756 20 400 1.26E-74 T 11-10-2018 TVD_04190 4a58da9f4e11fc23b012c0fd99ca4b21 410 Pfam PF13439 Glycosyltransferase Family 4 30 204 7.3E-27 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TVD_04190 4a58da9f4e11fc23b012c0fd99ca4b21 410 Gene3D G3DSA:3.40.50.2000 17 217 2.0E-30 T 11-10-2018 TVD_10820 e49e5d77b4cd6456a79c3e85d6e5a08b 526 Gene3D G3DSA:2.60.40.420 375 526 3.0E-43 T 11-10-2018 IPR008972 Cupredoxin TVD_10820 e49e5d77b4cd6456a79c3e85d6e5a08b 526 Gene3D G3DSA:2.60.40.420 185 350 7.3E-42 T 11-10-2018 IPR008972 Cupredoxin TVD_10820 e49e5d77b4cd6456a79c3e85d6e5a08b 526 SUPERFAMILY SSF49503 48 181 5.2E-26 T 11-10-2018 IPR008972 Cupredoxin TVD_10820 e49e5d77b4cd6456a79c3e85d6e5a08b 526 SUPERFAMILY SSF49503 390 524 2.38E-34 T 11-10-2018 IPR008972 Cupredoxin TVD_10820 e49e5d77b4cd6456a79c3e85d6e5a08b 526 SUPERFAMILY SSF49503 189 310 3.7E-18 T 11-10-2018 IPR008972 Cupredoxin TVD_10820 e49e5d77b4cd6456a79c3e85d6e5a08b 526 Gene3D G3DSA:2.60.40.420 48 184 3.4E-32 T 11-10-2018 IPR008972 Cupredoxin TVD_10820 e49e5d77b4cd6456a79c3e85d6e5a08b 526 Pfam PF07731 Multicopper oxidase 396 525 3.0E-29 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 TVD_10820 e49e5d77b4cd6456a79c3e85d6e5a08b 526 Pfam PF07732 Multicopper oxidase 86 179 5.0E-24 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 TVD_03850 247d5537abafb8fcadcfb8966209bf12 136 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 131 3.2E-43 T 11-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L TVD_03850 247d5537abafb8fcadcfb8966209bf12 136 SUPERFAMILY SSF81330 13 127 5.1E-34 T 11-10-2018 IPR036019 Gated mechanosensitive channel TVD_03850 247d5537abafb8fcadcfb8966209bf12 136 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 132 4.8E-45 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 TVD_03850 247d5537abafb8fcadcfb8966209bf12 136 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 132 23.144 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 TVD_03850 247d5537abafb8fcadcfb8966209bf12 136 Gene3D G3DSA:1.10.1200.120 3 134 4.2E-41 T 11-10-2018 IPR036019 Gated mechanosensitive channel TVD_03850 247d5537abafb8fcadcfb8966209bf12 136 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 11-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site TVD_03850 247d5537abafb8fcadcfb8966209bf12 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 4.7E-8 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 TVD_03850 247d5537abafb8fcadcfb8966209bf12 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 4.7E-8 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 TVD_03850 247d5537abafb8fcadcfb8966209bf12 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 4.7E-8 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 TVD_13265 3092b9b8b70f289c198f0092a84ef956 216 SUPERFAMILY SSF53163 65 206 1.83E-32 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily TVD_13265 3092b9b8b70f289c198f0092a84ef956 216 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 66 204 3.0E-32 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 TVD_13265 3092b9b8b70f289c198f0092a84ef956 216 PRINTS PR00446 Hydrogen uptake protein signature 125 141 8.5E-7 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 TVD_13265 3092b9b8b70f289c198f0092a84ef956 216 PRINTS PR00446 Hydrogen uptake protein signature 114 124 8.5E-7 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 TVD_13265 3092b9b8b70f289c198f0092a84ef956 216 PRINTS PR00446 Hydrogen uptake protein signature 77 88 8.5E-7 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 TVD_13265 3092b9b8b70f289c198f0092a84ef956 216 PRINTS PR00446 Hydrogen uptake protein signature 65 77 8.5E-7 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 TVD_13265 3092b9b8b70f289c198f0092a84ef956 216 Gene3D G3DSA:3.40.50.1450 65 208 1.2E-38 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily TVD_13265 3092b9b8b70f289c198f0092a84ef956 216 Pfam PF01750 Hydrogenase maturation protease 103 203 3.4E-14 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 TVD_02040 b0df21a4377b4a98bbac3be26c2327c5 256 Gene3D G3DSA:3.40.50.720 7 254 3.2E-77 T 11-10-2018 TVD_02040 b0df21a4377b4a98bbac3be26c2327c5 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 192 4.4E-4 T 11-10-2018 TVD_02040 b0df21a4377b4a98bbac3be26c2327c5 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TVD_02040 b0df21a4377b4a98bbac3be26c2327c5 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.5E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_02040 b0df21a4377b4a98bbac3be26c2327c5 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.5E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_02040 b0df21a4377b4a98bbac3be26c2327c5 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.5E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_02040 b0df21a4377b4a98bbac3be26c2327c5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.5E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_02040 b0df21a4377b4a98bbac3be26c2327c5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.5E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_02040 b0df21a4377b4a98bbac3be26c2327c5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.5E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_02040 b0df21a4377b4a98bbac3be26c2327c5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.5E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_02040 b0df21a4377b4a98bbac3be26c2327c5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.5E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_02040 b0df21a4377b4a98bbac3be26c2327c5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.5E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_02040 b0df21a4377b4a98bbac3be26c2327c5 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 249 5.4E-70 T 11-10-2018 TVD_02040 b0df21a4377b4a98bbac3be26c2327c5 256 SUPERFAMILY SSF51735 12 250 9.66E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_06715 6029a78b37e520116c55f41e01a4b4ef 449 Pfam PF04715 Anthranilate synthase component I, N terminal region 14 135 1.1E-7 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TVD_06715 6029a78b37e520116c55f41e01a4b4ef 449 Gene3D G3DSA:3.60.120.10 1 444 1.4E-150 T 11-10-2018 IPR005801 ADC synthase GO:0009058 TVD_06715 6029a78b37e520116c55f41e01a4b4ef 449 SUPERFAMILY SSF56322 20 442 3.27E-126 T 11-10-2018 IPR005801 ADC synthase GO:0009058 TVD_06715 6029a78b37e520116c55f41e01a4b4ef 449 Pfam PF00425 chorismate binding enzyme 177 433 6.1E-95 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal TVD_06715 6029a78b37e520116c55f41e01a4b4ef 449 PRINTS PR00095 Anthranilate synthase component I signature 280 293 4.1E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TVD_06715 6029a78b37e520116c55f41e01a4b4ef 449 PRINTS PR00095 Anthranilate synthase component I signature 375 389 4.1E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TVD_06715 6029a78b37e520116c55f41e01a4b4ef 449 PRINTS PR00095 Anthranilate synthase component I signature 294 307 4.1E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TVD_06715 6029a78b37e520116c55f41e01a4b4ef 449 PRINTS PR00095 Anthranilate synthase component I signature 390 404 4.1E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TVD_05735 4a9bfb5bfeb666eb27795ff1870aafb6 407 SUPERFAMILY SSF53383 4 389 7.98E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_05735 4a9bfb5bfeb666eb27795ff1870aafb6 407 Gene3D G3DSA:3.90.1150.10 289 387 1.5E-134 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_05735 4a9bfb5bfeb666eb27795ff1870aafb6 407 Gene3D G3DSA:3.40.640.10 64 288 1.5E-134 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_05735 4a9bfb5bfeb666eb27795ff1870aafb6 407 Pfam PF00155 Aminotransferase class I and II 32 376 7.8E-58 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TVD_08100 07af91b6a1b6b7b222b43a8b373edc85 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 264 1.9E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TVD_08100 07af91b6a1b6b7b222b43a8b373edc85 279 SUPERFAMILY SSF161098 80 263 6.41E-24 T 11-10-2018 IPR035906 MetI-like superfamily TVD_08100 07af91b6a1b6b7b222b43a8b373edc85 279 Gene3D G3DSA:1.10.3720.10 78 273 5.4E-19 T 11-10-2018 IPR035906 MetI-like superfamily TVD_00550 7d245b0c4a19e085578258ba9b872c79 284 SUPERFAMILY SSF53328 89 284 2.09E-62 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TVD_00550 7d245b0c4a19e085578258ba9b872c79 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 283 45.611 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TVD_00550 7d245b0c4a19e085578258ba9b872c79 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 283 1.2E-100 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TVD_00550 7d245b0c4a19e085578258ba9b872c79 284 Pfam PF00551 Formyl transferase 89 263 2.6E-37 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TVD_00550 7d245b0c4a19e085578258ba9b872c79 284 Gene3D G3DSA:3.40.50.170 87 284 1.2E-70 T 11-10-2018 TVD_00550 7d245b0c4a19e085578258ba9b872c79 284 SUPERFAMILY SSF55021 6 82 3.16E-14 T 11-10-2018 TVD_00550 7d245b0c4a19e085578258ba9b872c79 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 5.8E-54 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TVD_00550 7d245b0c4a19e085578258ba9b872c79 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 111 138 5.8E-54 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TVD_00550 7d245b0c4a19e085578258ba9b872c79 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 5.8E-54 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TVD_00550 7d245b0c4a19e085578258ba9b872c79 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 5.8E-54 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TVD_00550 7d245b0c4a19e085578258ba9b872c79 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 89 111 5.8E-54 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TVD_00550 7d245b0c4a19e085578258ba9b872c79 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 5.8E-54 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 TVD_00550 7d245b0c4a19e085578258ba9b872c79 284 PIRSF PIRSF036480 4 284 8.5E-108 T 11-10-2018 TVD_00550 7d245b0c4a19e085578258ba9b872c79 284 Gene3D G3DSA:3.30.70.260 2 85 1.7E-21 T 11-10-2018 TVD_11565 b517fd7c1651b63147dd7d0f72372da5 153 Gene3D G3DSA:3.10.129.10 2 150 6.1E-10 T 11-10-2018 TVD_11565 b517fd7c1651b63147dd7d0f72372da5 153 SUPERFAMILY SSF54637 11 146 9.18E-13 T 11-10-2018 IPR029069 HotDog domain superfamily TVD_09955 f01e5b3f93f89ff081da93ca5bf3537a 280 Pfam PF01797 Transposase IS200 like 12 121 4.0E-14 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 TVD_09955 f01e5b3f93f89ff081da93ca5bf3537a 280 SUPERFAMILY SSF143422 1 128 6.02E-27 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TVD_09955 f01e5b3f93f89ff081da93ca5bf3537a 280 Gene3D G3DSA:3.30.70.1290 1 151 1.3E-43 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TVD_09955 f01e5b3f93f89ff081da93ca5bf3537a 280 SMART SM01321 9 123 4.8E-46 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 TVD_13270 23ec699fab430f4379814616918e3292 1020 SUPERFAMILY SSF52540 238 537 4.43E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_13270 23ec699fab430f4379814616918e3292 1020 Gene3D G3DSA:3.40.50.300 516 740 6.2E-23 T 11-10-2018 TVD_13270 23ec699fab430f4379814616918e3292 1020 Pfam PF04851 Type III restriction enzyme, res subunit 280 445 5.2E-12 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TVD_13270 23ec699fab430f4379814616918e3292 1020 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 115 204 1.7E-13 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 TVD_13270 23ec699fab430f4379814616918e3292 1020 Gene3D G3DSA:3.90.1570.50 106 259 1.0E-7 T 11-10-2018 TVD_13270 23ec699fab430f4379814616918e3292 1020 SMART SM00487 275 516 3.6E-8 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_13270 23ec699fab430f4379814616918e3292 1020 Gene3D G3DSA:3.40.50.300 279 448 1.2E-25 T 11-10-2018 TVD_00005 f4acbd8bf40e1b42f81b0c4f5409c403 611 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 611 21.044 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_00005 f4acbd8bf40e1b42f81b0c4f5409c403 611 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 247 262 5.5E-35 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_00005 f4acbd8bf40e1b42f81b0c4f5409c403 611 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 51 63 5.5E-35 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_00005 f4acbd8bf40e1b42f81b0c4f5409c403 611 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 395 414 5.5E-35 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_00005 f4acbd8bf40e1b42f81b0c4f5409c403 611 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 319 335 5.5E-35 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_00005 f4acbd8bf40e1b42f81b0c4f5409c403 611 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 5.5E-35 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_00005 f4acbd8bf40e1b42f81b0c4f5409c403 611 SUPERFAMILY SSF109604 341 491 1.99E-17 T 11-10-2018 TVD_00005 f4acbd8bf40e1b42f81b0c4f5409c403 611 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 5 608 1.6E-201 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_00005 f4acbd8bf40e1b42f81b0c4f5409c403 611 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 552 8.2E-208 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_13235 a6cf88ece0f32243bb1d75f272ee3a22 331 Gene3D G3DSA:3.40.50.720 2 316 8.9E-123 T 11-10-2018 TVD_13235 a6cf88ece0f32243bb1d75f272ee3a22 331 SUPERFAMILY SSF52283 2 135 9.36E-33 T 11-10-2018 TVD_13235 a6cf88ece0f32243bb1d75f272ee3a22 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 TVD_13235 a6cf88ece0f32243bb1d75f272ee3a22 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 2.9E-54 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TVD_13235 a6cf88ece0f32243bb1d75f272ee3a22 331 Gene3D G3DSA:3.40.50.720 102 297 8.9E-123 T 11-10-2018 TVD_13235 a6cf88ece0f32243bb1d75f272ee3a22 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TVD_13235 a6cf88ece0f32243bb1d75f272ee3a22 331 SUPERFAMILY SSF51735 102 298 8.46E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_13235 a6cf88ece0f32243bb1d75f272ee3a22 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 320 1.3E-27 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 TVD_03980 9bb96b76072ecd100eeec064733bdd3e 652 SUPERFAMILY SSF56801 21 630 8.24E-171 T 11-10-2018 TVD_03980 9bb96b76072ecd100eeec064733bdd3e 652 Pfam PF00501 AMP-binding enzyme 90 527 4.7E-94 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TVD_03980 9bb96b76072ecd100eeec064733bdd3e 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 10 652 50.972 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 TVD_03980 9bb96b76072ecd100eeec064733bdd3e 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 33 87 1.9E-17 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 TVD_03980 9bb96b76072ecd100eeec064733bdd3e 652 Gene3D G3DSA:3.30.300.30 523 652 4.4E-29 T 11-10-2018 TVD_03980 9bb96b76072ecd100eeec064733bdd3e 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 536 617 3.8E-28 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TVD_03980 9bb96b76072ecd100eeec064733bdd3e 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 31 649 2.1E-296 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 TVD_03980 9bb96b76072ecd100eeec064733bdd3e 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 265 276 - T 11-10-2018 IPR020845 AMP-binding, conserved site TVD_03980 9bb96b76072ecd100eeec064733bdd3e 652 Gene3D G3DSA:3.40.50.12780 56 520 1.6E-106 T 11-10-2018 TVD_10815 b22e95eac511694c2efa5123f896a773 277 PIRSF PIRSF012318 8 275 2.8E-97 T 11-10-2018 IPR011197 Uncharacterised conserved protein UCP012318 TVD_10815 b22e95eac511694c2efa5123f896a773 277 Pfam PF04305 Protein of unknown function (DUF455) 22 265 9.6E-96 T 11-10-2018 IPR007402 Protein of unknown function DUF455 TVD_10815 b22e95eac511694c2efa5123f896a773 277 SUPERFAMILY SSF47240 80 226 1.72E-18 T 11-10-2018 IPR009078 Ferritin-like superfamily TVD_08175 622034a5388ab8d9b59576e0ddac9c3c 317 Pfam PF13676 TIR domain 5 110 2.0E-20 T 11-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TVD_08175 622034a5388ab8d9b59576e0ddac9c3c 317 SUPERFAMILY SSF52200 4 134 1.83E-23 T 11-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily TVD_08175 622034a5388ab8d9b59576e0ddac9c3c 317 SMART SM00255 2 137 1.6E-8 T 11-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TVD_08175 622034a5388ab8d9b59576e0ddac9c3c 317 Gene3D G3DSA:3.40.50.10140 1 116 1.2E-25 T 11-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily TVD_02350 03064f444a63c8a1953408a28044f36b 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 3.6E-59 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02350 03064f444a63c8a1953408a28044f36b 396 Gene3D G3DSA:3.40.50.300 1 205 7.7E-71 T 11-10-2018 TVD_02350 03064f444a63c8a1953408a28044f36b 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02350 03064f444a63c8a1953408a28044f36b 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02350 03064f444a63c8a1953408a28044f36b 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02350 03064f444a63c8a1953408a28044f36b 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02350 03064f444a63c8a1953408a28044f36b 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_02350 03064f444a63c8a1953408a28044f36b 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 2.0E-34 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal TVD_02350 03064f444a63c8a1953408a28044f36b 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site TVD_02350 03064f444a63c8a1953408a28044f36b 396 SUPERFAMILY SSF50465 304 396 2.16E-37 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal TVD_02350 03064f444a63c8a1953408a28044f36b 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.9E-19 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 TVD_02350 03064f444a63c8a1953408a28044f36b 396 Gene3D G3DSA:2.40.30.10 340 395 3.3E-30 T 11-10-2018 TVD_02350 03064f444a63c8a1953408a28044f36b 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.27 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TVD_02350 03064f444a63c8a1953408a28044f36b 396 Gene3D G3DSA:2.40.30.10 209 336 5.7E-52 T 11-10-2018 TVD_02350 03064f444a63c8a1953408a28044f36b 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 1.4E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TVD_02350 03064f444a63c8a1953408a28044f36b 396 SUPERFAMILY SSF50447 207 303 6.87E-31 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TVD_02350 03064f444a63c8a1953408a28044f36b 396 SUPERFAMILY SSF52540 6 221 7.0E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_02350 03064f444a63c8a1953408a28044f36b 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 396 1.8E-230 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 TVD_00045 b222843cab0c95842e7080b35aabd113 296 PRINTS PR00478 Phosphoribulokinase family signature 171 188 8.3E-35 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 TVD_00045 b222843cab0c95842e7080b35aabd113 296 PRINTS PR00478 Phosphoribulokinase family signature 189 212 8.3E-35 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 TVD_00045 b222843cab0c95842e7080b35aabd113 296 PRINTS PR00478 Phosphoribulokinase family signature 12 29 8.3E-35 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 TVD_00045 b222843cab0c95842e7080b35aabd113 296 PRINTS PR00478 Phosphoribulokinase family signature 133 151 8.3E-35 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 TVD_00045 b222843cab0c95842e7080b35aabd113 296 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 221 1.6E-74 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 TVD_00045 b222843cab0c95842e7080b35aabd113 296 Gene3D G3DSA:3.40.50.300 1 296 5.4E-116 T 11-10-2018 TVD_00045 b222843cab0c95842e7080b35aabd113 296 SUPERFAMILY SSF52540 3 293 3.59E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_00045 b222843cab0c95842e7080b35aabd113 296 ProSitePatterns PS00567 Phosphoribulokinase signature. 171 184 - T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 TVD_00775 7f6139e6dd89047f22a26c960f9be1eb 170 SUPERFAMILY SSF52141 11 162 6.67E-37 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TVD_00775 7f6139e6dd89047f22a26c960f9be1eb 170 SMART SM00987 12 162 5.3E-8 T 11-10-2018 TVD_00775 7f6139e6dd89047f22a26c960f9be1eb 170 SMART SM00986 12 162 5.3E-8 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TVD_00775 7f6139e6dd89047f22a26c960f9be1eb 170 Pfam PF03167 Uracil DNA glycosylase superfamily 15 158 7.6E-7 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TVD_00775 7f6139e6dd89047f22a26c960f9be1eb 170 Gene3D G3DSA:3.40.470.10 7 167 1.2E-55 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 TVD_00775 7f6139e6dd89047f22a26c960f9be1eb 170 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 11 158 1.3E-50 T 11-10-2018 IPR026353 Hypoxanthine-DNA glycosylase TVD_02295 ab80ced550491d3e43f449f9b6ea91a0 121 Gene3D G3DSA:1.20.5.1030 63 118 4.4E-14 T 11-10-2018 IPR038379 SecE superfamily TVD_02295 ab80ced550491d3e43f449f9b6ea91a0 121 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 68 96 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TVD_02295 ab80ced550491d3e43f449f9b6ea91a0 121 PRINTS PR01650 Bacterial translocase SecE signature 86 106 7.3E-21 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 TVD_02295 ab80ced550491d3e43f449f9b6ea91a0 121 PRINTS PR01650 Bacterial translocase SecE signature 41 62 7.3E-21 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 TVD_02295 ab80ced550491d3e43f449f9b6ea91a0 121 PRINTS PR01650 Bacterial translocase SecE signature 62 82 7.3E-21 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 TVD_02295 ab80ced550491d3e43f449f9b6ea91a0 121 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 67 118 9.0E-15 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 TVD_02295 ab80ced550491d3e43f449f9b6ea91a0 121 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 68 117 1.1E-16 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TVD_02295 ab80ced550491d3e43f449f9b6ea91a0 121 Hamap MF_00422 Protein translocase subunit SecE [secE]. 63 119 11.668 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 TVD_04855 a84811582e387e7d081a75c9810c9709 269 SUPERFAMILY SSF56655 1 260 3.66E-85 T 11-10-2018 TVD_04855 a84811582e387e7d081a75c9810c9709 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 7.3E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_04855 a84811582e387e7d081a75c9810c9709 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 7.3E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_04855 a84811582e387e7d081a75c9810c9709 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 7.3E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_04855 a84811582e387e7d081a75c9810c9709 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 7.3E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_04855 a84811582e387e7d081a75c9810c9709 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 7.3E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_04855 a84811582e387e7d081a75c9810c9709 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 7.3E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_04855 a84811582e387e7d081a75c9810c9709 269 Pfam PF00459 Inositol monophosphatase family 2 256 2.1E-67 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 TVD_04855 a84811582e387e7d081a75c9810c9709 269 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 TVD_04855 a84811582e387e7d081a75c9810c9709 269 Gene3D G3DSA:3.40.190.80 141 268 1.1E-40 T 11-10-2018 TVD_04855 a84811582e387e7d081a75c9810c9709 269 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site TVD_04855 a84811582e387e7d081a75c9810c9709 269 Gene3D G3DSA:3.30.540.10 1 140 3.7E-48 T 11-10-2018 TVD_04855 a84811582e387e7d081a75c9810c9709 269 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.2E-26 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 TVD_04855 a84811582e387e7d081a75c9810c9709 269 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.2E-26 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 TVD_04855 a84811582e387e7d081a75c9810c9709 269 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.2E-26 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 TVD_04855 a84811582e387e7d081a75c9810c9709 269 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.2E-26 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 TVD_09240 2555eb2f6e66411544f17448acda52e3 424 Gene3D G3DSA:2.40.420.20 299 364 3.0E-80 T 11-10-2018 TVD_09240 2555eb2f6e66411544f17448acda52e3 424 Gene3D G3DSA:2.40.50.100 67 209 3.0E-80 T 11-10-2018 TVD_09240 2555eb2f6e66411544f17448acda52e3 424 SUPERFAMILY SSF111369 57 292 7.32E-56 T 11-10-2018 TVD_09240 2555eb2f6e66411544f17448acda52e3 424 Gene3D G3DSA:1.10.287.470 102 175 3.0E-80 T 11-10-2018 TVD_09240 2555eb2f6e66411544f17448acda52e3 424 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 288 1.6E-13 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TVD_09240 2555eb2f6e66411544f17448acda52e3 424 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 368 4.4E-71 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TVD_09240 2555eb2f6e66411544f17448acda52e3 424 Gene3D G3DSA:2.40.30.170 54 298 3.0E-80 T 11-10-2018 TVD_04055 d976da8f9ae4c770265fc168854bfe47 114 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 11-10-2018 IPR019808 Histidine triad, conserved site TVD_04055 d976da8f9ae4c770265fc168854bfe47 114 Gene3D G3DSA:3.30.428.10 1 114 4.0E-41 T 11-10-2018 IPR036265 HIT-like superfamily TVD_04055 d976da8f9ae4c770265fc168854bfe47 114 PRINTS PR00332 Histidine triad family signature 5 21 1.7E-20 T 11-10-2018 IPR001310 Histidine triad (HIT) protein TVD_04055 d976da8f9ae4c770265fc168854bfe47 114 PRINTS PR00332 Histidine triad family signature 94 104 1.7E-20 T 11-10-2018 IPR001310 Histidine triad (HIT) protein TVD_04055 d976da8f9ae4c770265fc168854bfe47 114 PRINTS PR00332 Histidine triad family signature 26 44 1.7E-20 T 11-10-2018 IPR001310 Histidine triad (HIT) protein TVD_04055 d976da8f9ae4c770265fc168854bfe47 114 Pfam PF11969 Scavenger mRNA decapping enzyme C-term binding 4 105 1.4E-27 T 11-10-2018 TVD_04055 d976da8f9ae4c770265fc168854bfe47 114 SUPERFAMILY SSF54197 1 113 5.72E-40 T 11-10-2018 IPR036265 HIT-like superfamily TVD_05805 15514a3bf958f2ae5cc3b5b5bf2f102c 130 Pfam PF00571 CBS domain 3 58 5.2E-10 T 11-10-2018 IPR000644 CBS domain TVD_05805 15514a3bf958f2ae5cc3b5b5bf2f102c 130 Pfam PF00571 CBS domain 70 124 2.8E-11 T 11-10-2018 IPR000644 CBS domain TVD_05805 15514a3bf958f2ae5cc3b5b5bf2f102c 130 SMART SM00116 77 124 1.2E-9 T 11-10-2018 IPR000644 CBS domain TVD_05805 15514a3bf958f2ae5cc3b5b5bf2f102c 130 SMART SM00116 10 59 1.9E-8 T 11-10-2018 IPR000644 CBS domain TVD_05805 15514a3bf958f2ae5cc3b5b5bf2f102c 130 SUPERFAMILY SSF54631 1 125 2.02E-28 T 11-10-2018 TVD_05805 15514a3bf958f2ae5cc3b5b5bf2f102c 130 Gene3D G3DSA:3.10.580.10 1 129 1.2E-31 T 11-10-2018 TVD_02405 4150a76ddc5a0acd7545bb61fe606fe6 88 ProSitePatterns PS00056 Ribosomal protein S17 signature. 60 72 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02405 4150a76ddc5a0acd7545bb61fe606fe6 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 10 79 2.0E-32 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02405 4150a76ddc5a0acd7545bb61fe606fe6 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 9 84 22.669 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02405 4150a76ddc5a0acd7545bb61fe606fe6 88 Gene3D G3DSA:2.40.50.140 6 87 2.0E-31 T 11-10-2018 TVD_02405 4150a76ddc5a0acd7545bb61fe606fe6 88 Pfam PF00366 Ribosomal protein S17 14 81 4.5E-30 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02405 4150a76ddc5a0acd7545bb61fe606fe6 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 10 80 6.0E-22 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02405 4150a76ddc5a0acd7545bb61fe606fe6 88 PRINTS PR00973 Ribosomal protein S17 family signature 28 51 2.9E-11 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02405 4150a76ddc5a0acd7545bb61fe606fe6 88 PRINTS PR00973 Ribosomal protein S17 family signature 60 70 2.9E-11 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02405 4150a76ddc5a0acd7545bb61fe606fe6 88 PRINTS PR00973 Ribosomal protein S17 family signature 70 77 2.9E-11 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02405 4150a76ddc5a0acd7545bb61fe606fe6 88 SUPERFAMILY SSF50249 10 84 6.85E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_10625 a49be9a065f29e69726af4d46dfdbbf7 303 Pfam PF02754 Cysteine-rich domain 151 246 1.7E-11 T 11-10-2018 IPR004017 Cysteine-rich domain TVD_10625 a49be9a065f29e69726af4d46dfdbbf7 303 Pfam PF02754 Cysteine-rich domain 4 88 4.3E-16 T 11-10-2018 IPR004017 Cysteine-rich domain TVD_04240 0071c42cc9add1f3492bcfc98d6e68db 193 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 155 73.404 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 TVD_04240 0071c42cc9add1f3492bcfc98d6e68db 193 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 148 5.7E-55 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 TVD_04240 0071c42cc9add1f3492bcfc98d6e68db 193 Pfam PF03477 ATP cone domain 51 134 9.6E-12 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 TVD_04255 427d2befbd99adce7839260c0cfe155b 368 Pfam PF00925 GTP cyclohydrolase II 208 366 8.3E-39 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TVD_04255 427d2befbd99adce7839260c0cfe155b 368 Gene3D G3DSA:3.90.870.10 1 206 9.4E-84 T 11-10-2018 TVD_04255 427d2befbd99adce7839260c0cfe155b 368 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 1.5E-80 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TVD_04255 427d2befbd99adce7839260c0cfe155b 368 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 36.878 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TVD_04255 427d2befbd99adce7839260c0cfe155b 368 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 1.4E-68 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TVD_04255 427d2befbd99adce7839260c0cfe155b 368 PIRSF PIRSF001259 1 368 8.6E-123 T 11-10-2018 TVD_04255 427d2befbd99adce7839260c0cfe155b 368 SUPERFAMILY SSF142695 204 367 1.44E-46 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 TVD_04255 427d2befbd99adce7839260c0cfe155b 368 SUPERFAMILY SSF55821 2 203 1.21E-83 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily TVD_10920 b2c65486af9277013d969f876330377d 306 Pfam PF07650 KH domain 215 290 4.1E-19 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_10920 b2c65486af9277013d969f876330377d 306 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 176 1.8E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TVD_10920 b2c65486af9277013d969f876330377d 306 SUPERFAMILY SSF54814 188 302 2.13E-38 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 TVD_10920 b2c65486af9277013d969f876330377d 306 Hamap MF_00367 GTPase Era [era]. 12 302 33.694 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10920 b2c65486af9277013d969f876330377d 306 Pfam PF01926 50S ribosome-binding GTPase 17 131 5.2E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 TVD_10920 b2c65486af9277013d969f876330377d 306 Gene3D G3DSA:3.30.300.20 192 306 4.0E-39 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TVD_10920 b2c65486af9277013d969f876330377d 306 SUPERFAMILY SSF52540 17 189 2.81E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10920 b2c65486af9277013d969f876330377d 306 TIGRFAM TIGR00436 era: GTP-binding protein Era 16 285 7.0E-79 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10920 b2c65486af9277013d969f876330377d 306 Gene3D G3DSA:3.40.50.300 10 190 1.2E-46 T 11-10-2018 TVD_03595 4c80d6d85340c061c92d8805a39d42f9 239 SUPERFAMILY SSF143243 7 213 1.29E-53 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03595 4c80d6d85340c061c92d8805a39d42f9 239 Gene3D G3DSA:3.30.460.80 87 170 6.1E-29 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03595 4c80d6d85340c061c92d8805a39d42f9 239 Gene3D G3DSA:3.30.460.80 1 77 1.4E-6 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03595 4c80d6d85340c061c92d8805a39d42f9 239 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 117 178 1.0E-21 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03595 4c80d6d85340c061c92d8805a39d42f9 239 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 32 190 3.0E-39 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03595 4c80d6d85340c061c92d8805a39d42f9 239 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 1 198 33.491 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03595 4c80d6d85340c061c92d8805a39d42f9 239 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 151 172 - T 11-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_01340 21410c82fbc13e3ea64f5bf0a59c3aa3 210 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 44 205 36.239 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TVD_01340 21410c82fbc13e3ea64f5bf0a59c3aa3 210 SUPERFAMILY SSF55068 8 206 2.49E-76 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TVD_01340 21410c82fbc13e3ea64f5bf0a59c3aa3 210 Pfam PF01625 Peptide methionine sulfoxide reductase 47 199 2.6E-63 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TVD_01340 21410c82fbc13e3ea64f5bf0a59c3aa3 210 Gene3D G3DSA:3.30.1060.10 6 210 2.4E-86 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TVD_01340 21410c82fbc13e3ea64f5bf0a59c3aa3 210 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 46 199 1.8E-61 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 SUPERFAMILY SSF53732 2 467 3.53E-162 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 468 59.864 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 Gene3D G3DSA:3.30.499.20 5 287 1.5E-101 T 11-10-2018 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 Gene3D G3DSA:3.30.499.10 325 470 1.0E-47 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 PRINTS PR00415 Aconitase family signature 344 355 3.3E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 PRINTS PR00415 Aconitase family signature 109 117 3.3E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 PRINTS PR00415 Aconitase family signature 120 133 3.3E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 PRINTS PR00415 Aconitase family signature 401 414 3.3E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 PRINTS PR00415 Aconitase family signature 83 96 3.3E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 PRINTS PR00415 Aconitase family signature 196 209 3.3E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 PRINTS PR00415 Aconitase family signature 210 223 3.3E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 PRINTS PR00415 Aconitase family signature 134 149 3.3E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 PRINTS PR00415 Aconitase family signature 287 301 3.3E-47 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 463 2.0E-232 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 TVD_05475 fbcdcf47d9dc2e392b6885dd8b1d4aa1 470 Pfam PF00330 Aconitase family (aconitate hydratase) 8 459 1.4E-157 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 TVD_12580 f557afd4bacb94cbbcf8fcd90c628346 332 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12580 f557afd4bacb94cbbcf8fcd90c628346 332 SUPERFAMILY SSF51735 3 167 7.36E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_12580 f557afd4bacb94cbbcf8fcd90c628346 332 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 4.8E-132 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12580 f557afd4bacb94cbbcf8fcd90c628346 332 Gene3D G3DSA:3.40.50.720 4 327 1.5E-146 T 11-10-2018 TVD_12580 f557afd4bacb94cbbcf8fcd90c628346 332 Gene3D G3DSA:3.30.360.10 150 315 1.5E-146 T 11-10-2018 TVD_12580 f557afd4bacb94cbbcf8fcd90c628346 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 3.9E-44 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12580 f557afd4bacb94cbbcf8fcd90c628346 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 3.9E-44 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12580 f557afd4bacb94cbbcf8fcd90c628346 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 3.9E-44 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12580 f557afd4bacb94cbbcf8fcd90c628346 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 3.9E-44 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12580 f557afd4bacb94cbbcf8fcd90c628346 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 3.9E-44 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12580 f557afd4bacb94cbbcf8fcd90c628346 332 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 7.7E-68 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12580 f557afd4bacb94cbbcf8fcd90c628346 332 PIRSF PIRSF000149 1 332 4.6E-129 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12580 f557afd4bacb94cbbcf8fcd90c628346 332 SUPERFAMILY SSF55347 150 313 6.55E-75 T 11-10-2018 TVD_12580 f557afd4bacb94cbbcf8fcd90c628346 332 SMART SM00846 3 151 1.4E-93 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12580 f557afd4bacb94cbbcf8fcd90c628346 332 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 103 3.9E-38 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_01780 e4527def5dc53255cde7086ec874a9dd 148 Pfam PF09424 Yqey-like protein 4 146 6.9E-53 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 TVD_01780 e4527def5dc53255cde7086ec874a9dd 148 Gene3D G3DSA:1.10.10.410 91 146 1.1E-17 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal TVD_01780 e4527def5dc53255cde7086ec874a9dd 148 SUPERFAMILY SSF89095 1 146 1.73E-41 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 TVD_01780 e4527def5dc53255cde7086ec874a9dd 148 Gene3D G3DSA:1.10.1510.10 1 90 2.1E-28 T 11-10-2018 TVD_08520 146a29514ec3d6698b8e18d4f8de462e 109 Gene3D G3DSA:2.30.30.110 16 109 8.3E-9 T 11-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor TVD_08520 146a29514ec3d6698b8e18d4f8de462e 109 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 5 105 1.4E-9 T 11-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 TVD_08520 146a29514ec3d6698b8e18d4f8de462e 109 SUPERFAMILY SSF50118 1 109 5.67E-12 T 11-10-2018 TVD_01785 2fd93cfb9a3ecf4a1665939ef44fdf39 468 SUPERFAMILY SSF46548 7 157 9.94E-40 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_01785 2fd93cfb9a3ecf4a1665939ef44fdf39 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 455 1.1E-24 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TVD_01785 2fd93cfb9a3ecf4a1665939ef44fdf39 468 SUPERFAMILY SSF51971 145 399 1.06E-69 T 11-10-2018 TVD_01785 2fd93cfb9a3ecf4a1665939ef44fdf39 468 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 3.2E-36 T 11-10-2018 TVD_01785 2fd93cfb9a3ecf4a1665939ef44fdf39 468 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 3.2E-36 T 11-10-2018 TVD_01785 2fd93cfb9a3ecf4a1665939ef44fdf39 468 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 3.2E-36 T 11-10-2018 TVD_01785 2fd93cfb9a3ecf4a1665939ef44fdf39 468 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 3.2E-36 T 11-10-2018 TVD_01785 2fd93cfb9a3ecf4a1665939ef44fdf39 468 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 3.2E-36 T 11-10-2018 TVD_01785 2fd93cfb9a3ecf4a1665939ef44fdf39 468 Gene3D G3DSA:1.10.1060.10 15 144 6.0E-31 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_01785 2fd93cfb9a3ecf4a1665939ef44fdf39 468 Gene3D G3DSA:3.50.50.60 145 254 2.4E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_01785 2fd93cfb9a3ecf4a1665939ef44fdf39 468 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 7 468 2.6E-238 T 11-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 TVD_01785 2fd93cfb9a3ecf4a1665939ef44fdf39 468 Gene3D G3DSA:3.50.50.60 255 398 6.2E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_01785 2fd93cfb9a3ecf4a1665939ef44fdf39 468 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 134 1.7E-36 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 TVD_13670 6f7ffeba6a767477ef74ac4df5d78ee4 156 PIRSF PIRSF010312 2 156 5.8E-40 T 11-10-2018 IPR016568 Sulphur oxidation, SoxY TVD_13670 6f7ffeba6a767477ef74ac4df5d78ee4 156 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 5 156 7.8E-45 T 11-10-2018 IPR016568 Sulphur oxidation, SoxY TVD_13670 6f7ffeba6a767477ef74ac4df5d78ee4 156 Pfam PF13501 Sulfur oxidation protein SoxY 53 154 4.5E-30 T 11-10-2018 IPR032711 Ig-like SoxY domain TVD_13670 6f7ffeba6a767477ef74ac4df5d78ee4 156 Gene3D G3DSA:2.60.40.2470 34 156 1.6E-38 T 11-10-2018 IPR038162 Ig-like SoxY domain superfamily TVD_09370 9681e321fe881d6bcd65c500872b3cf9 555 Pfam PF12848 ABC transporter 230 305 4.5E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain TVD_09370 9681e321fe881d6bcd65c500872b3cf9 555 Pfam PF00005 ABC transporter 340 473 7.2E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_09370 9681e321fe881d6bcd65c500872b3cf9 555 Gene3D G3DSA:3.40.50.300 1 285 6.6E-84 T 11-10-2018 TVD_09370 9681e321fe881d6bcd65c500872b3cf9 555 SUPERFAMILY SSF52540 13 245 2.23E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_09370 9681e321fe881d6bcd65c500872b3cf9 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 2.2E-296 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 TVD_09370 9681e321fe881d6bcd65c500872b3cf9 555 SUPERFAMILY SSF52540 303 537 1.57E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_09370 9681e321fe881d6bcd65c500872b3cf9 555 Gene3D G3DSA:3.40.50.300 286 555 9.3E-77 T 11-10-2018 TVD_09370 9681e321fe881d6bcd65c500872b3cf9 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_09370 9681e321fe881d6bcd65c500872b3cf9 555 SMART SM00382 31 240 3.0E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_09370 9681e321fe881d6bcd65c500872b3cf9 555 SMART SM00382 348 522 6.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_09370 9681e321fe881d6bcd65c500872b3cf9 555 Pfam PF00005 ABC transporter 22 191 1.4E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_04910 0a2cf827375f23ea6f9a4307b98981cd 143 Gene3D G3DSA:3.30.70.141 1 143 8.3E-61 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TVD_04910 0a2cf827375f23ea6f9a4307b98981cd 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TVD_04910 0a2cf827375f23ea6f9a4307b98981cd 143 SMART SM00562 3 140 1.8E-90 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TVD_04910 0a2cf827375f23ea6f9a4307b98981cd 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.3E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TVD_04910 0a2cf827375f23ea6f9a4307b98981cd 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.3E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TVD_04910 0a2cf827375f23ea6f9a4307b98981cd 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.3E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TVD_04910 0a2cf827375f23ea6f9a4307b98981cd 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.3E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TVD_04910 0a2cf827375f23ea6f9a4307b98981cd 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.3E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TVD_04910 0a2cf827375f23ea6f9a4307b98981cd 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.728 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TVD_04910 0a2cf827375f23ea6f9a4307b98981cd 143 SUPERFAMILY SSF54919 1 140 8.9E-61 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TVD_04910 0a2cf827375f23ea6f9a4307b98981cd 143 Pfam PF00334 Nucleoside diphosphate kinase 4 136 2.3E-58 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TVD_01025 b1341dbe4ed29bae31359eaa39a6b4a9 561 PIRSF PIRSF007542 3 561 4.0E-224 T 11-10-2018 IPR012037 Alpha/beta-hydrolase family TVD_01025 b1341dbe4ed29bae31359eaa39a6b4a9 561 Pfam PF10081 Alpha/beta-hydrolase family 268 548 2.7E-113 T 11-10-2018 IPR027787 Alpha/beta-hydrolase, catalytic domain TVD_01025 b1341dbe4ed29bae31359eaa39a6b4a9 561 Pfam PF15420 Alpha/beta-hydrolase family N-terminus 43 251 2.6E-65 T 11-10-2018 IPR027788 Alpha/beta-hydrolase, N-terminal domain TVD_12350 e7f813dae6a9278b87529cb39c8b60ae 250 Pfam PF08241 Methyltransferase domain 43 131 1.1E-12 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TVD_12350 e7f813dae6a9278b87529cb39c8b60ae 250 Gene3D G3DSA:3.40.50.150 20 245 1.1E-78 T 11-10-2018 TVD_12350 e7f813dae6a9278b87529cb39c8b60ae 250 Gene3D G3DSA:1.10.10.2560 136 235 1.1E-78 T 11-10-2018 TVD_12350 e7f813dae6a9278b87529cb39c8b60ae 250 SUPERFAMILY SSF53335 7 201 6.41E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_02770 f3d86c4da27fd8f8a21476731f2116ad 568 Gene3D G3DSA:3.40.50.720 122 265 1.3E-26 T 11-10-2018 TVD_02770 f3d86c4da27fd8f8a21476731f2116ad 568 Gene3D G3DSA:1.10.287.70 9 103 1.0E-6 T 11-10-2018 TVD_02770 f3d86c4da27fd8f8a21476731f2116ad 568 SUPERFAMILY SSF51735 288 427 3.94E-25 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_02770 f3d86c4da27fd8f8a21476731f2116ad 568 SUPERFAMILY SSF51735 126 265 4.6E-25 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_02770 f3d86c4da27fd8f8a21476731f2116ad 568 SUPERFAMILY SSF81324 9 139 8.24E-13 T 11-10-2018 TVD_02770 f3d86c4da27fd8f8a21476731f2116ad 568 Pfam PF02254 TrkA-N domain 127 247 2.3E-20 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TVD_02770 f3d86c4da27fd8f8a21476731f2116ad 568 Pfam PF02254 TrkA-N domain 291 384 1.1E-16 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TVD_02770 f3d86c4da27fd8f8a21476731f2116ad 568 Gene3D G3DSA:3.40.50.720 288 418 4.2E-20 T 11-10-2018 TVD_02770 f3d86c4da27fd8f8a21476731f2116ad 568 Pfam PF07885 Ion channel 28 99 4.8E-8 T 11-10-2018 IPR013099 Potassium channel domain TVD_02770 f3d86c4da27fd8f8a21476731f2116ad 568 SUPERFAMILY SSF116726 482 529 1.26E-6 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_05720 f7627e1613c7c745e0565450de38c2e0 252 SUPERFAMILY SSF51261 35 249 1.94E-40 T 11-10-2018 IPR011055 Duplicated hybrid motif TVD_05720 f7627e1613c7c745e0565450de38c2e0 252 Pfam PF01476 LysM domain 35 77 6.5E-12 T 11-10-2018 IPR018392 LysM domain TVD_05720 f7627e1613c7c745e0565450de38c2e0 252 Pfam PF01551 Peptidase family M23 152 245 1.2E-24 T 11-10-2018 IPR016047 Peptidase M23 TVD_05720 f7627e1613c7c745e0565450de38c2e0 252 Gene3D G3DSA:2.70.70.10 116 250 9.4E-32 T 11-10-2018 IPR011055 Duplicated hybrid motif TVD_05720 f7627e1613c7c745e0565450de38c2e0 252 Gene3D G3DSA:3.10.350.10 33 76 5.9E-13 T 11-10-2018 IPR036779 LysM domain superfamily TVD_05720 f7627e1613c7c745e0565450de38c2e0 252 SMART SM00257 34 78 1.4E-10 T 11-10-2018 IPR018392 LysM domain TVD_12230 e95219797ce45123929f9df1b6c156ab 303 Gene3D G3DSA:3.40.50.2000 151 302 7.5E-23 T 11-10-2018 TVD_12230 e95219797ce45123929f9df1b6c156ab 303 SUPERFAMILY SSF53756 3 298 2.67E-56 T 11-10-2018 TVD_12230 e95219797ce45123929f9df1b6c156ab 303 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 283 4.1E-19 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 TVD_12230 e95219797ce45123929f9df1b6c156ab 303 Gene3D G3DSA:3.40.50.2000 1 142 4.1E-19 T 11-10-2018 TVD_13395 9feae25313f6a4cb9f5f2f03c137caa5 629 Pfam PF01964 Radical SAM ThiC family 140 590 3.2E-197 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 TVD_13395 9feae25313f6a4cb9f5f2f03c137caa5 629 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 595 97.961 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 TVD_13395 9feae25313f6a4cb9f5f2f03c137caa5 629 Pfam PF13667 ThiC-associated domain 22 99 7.6E-33 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 TVD_13395 9feae25313f6a4cb9f5f2f03c137caa5 629 Gene3D G3DSA:3.20.20.540 214 526 1.5E-150 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 TVD_13395 9feae25313f6a4cb9f5f2f03c137caa5 629 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 594 2.3E-212 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 TVD_11755 7a0bc65ae28dd9dc72bb6eb0e937bf0a 269 SUPERFAMILY SSF46626 36 149 5.66E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_11755 7a0bc65ae28dd9dc72bb6eb0e937bf0a 269 Gene3D G3DSA:1.10.760.10 145 269 3.7E-28 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_11755 7a0bc65ae28dd9dc72bb6eb0e937bf0a 269 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 46 269 1.7E-58 T 11-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 TVD_11755 7a0bc65ae28dd9dc72bb6eb0e937bf0a 269 SUPERFAMILY SSF46626 155 262 8.52E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_11755 7a0bc65ae28dd9dc72bb6eb0e937bf0a 269 Gene3D G3DSA:1.10.760.10 48 144 2.4E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_02120 b2965583c853120578cce44c2928d3d2 118 SUPERFAMILY SSF52980 7 113 6.54E-20 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TVD_02120 b2965583c853120578cce44c2928d3d2 118 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 113 20.586 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 TVD_02120 b2965583c853120578cce44c2928d3d2 118 Gene3D G3DSA:3.40.1350.10 10 117 2.7E-30 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 TVD_02120 b2965583c853120578cce44c2928d3d2 118 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 114 6.4E-26 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 TVD_02120 b2965583c853120578cce44c2928d3d2 118 Pfam PF02021 Uncharacterised protein family UPF0102 11 99 2.9E-25 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 Gene3D G3DSA:3.30.450.270 316 493 2.5E-143 T 11-10-2018 TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 SMART SM00267 505 673 3.3E-63 T 11-10-2018 IPR000160 GGDEF domain TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 Pfam PF00990 Diguanylate cyclase, GGDEF domain 516 669 1.2E-44 T 11-10-2018 IPR000160 GGDEF domain TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 Gene3D G3DSA:3.30.450.20 17 248 2.5E-143 T 11-10-2018 TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 SUPERFAMILY SSF55781 133 309 7.85E-51 T 11-10-2018 TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 Gene3D G3DSA:3.30.70.270 502 673 3.4E-56 T 11-10-2018 TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 Pfam PF08446 PAS fold 13 118 3.1E-18 T 11-10-2018 IPR013654 PAS fold-2 GO:0006355 TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 Pfam PF01590 GAF domain 145 308 5.8E-16 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 SUPERFAMILY SSF55785 9 119 1.99E-26 T 11-10-2018 IPR035965 PAS domain superfamily TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 SUPERFAMILY SSF55073 521 671 2.98E-46 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 SMART SM00065 143 317 7.8E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 Pfam PF00360 Phytochrome region 328 499 4.2E-35 T 11-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 SUPERFAMILY SSF55781 325 497 1.01E-36 T 11-10-2018 TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 PRINTS PR01033 Phytochrome signature 158 177 1.3E-13 T 11-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 PRINTS PR01033 Phytochrome signature 245 266 1.3E-13 T 11-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 PRINTS PR01033 Phytochrome signature 463 481 1.3E-13 T 11-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 PRINTS PR01033 Phytochrome signature 431 450 1.3E-13 T 11-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 512 672 3.3E-50 T 11-10-2018 IPR000160 GGDEF domain TVD_09360 b6d6bd32ecf6b5839d1a8155dde26476 675 Gene3D G3DSA:3.30.450.40 13 476 2.5E-143 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_10640 295488041485a282841e7d415f7490c3 342 Gene3D G3DSA:3.50.50.60 1 134 1.6E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_10640 295488041485a282841e7d415f7490c3 342 SUPERFAMILY SSF51971 1 333 4.12E-23 T 11-10-2018 TVD_10640 295488041485a282841e7d415f7490c3 342 Gene3D G3DSA:3.50.50.60 204 341 5.5E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_10640 295488041485a282841e7d415f7490c3 342 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 323 1.3E-17 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TVD_01290 fde53d517a325a227186f15180f95fba 452 Gene3D G3DSA:1.10.940.10 13 155 1.0E-32 T 11-10-2018 IPR035926 NusB-like superfamily TVD_01290 fde53d517a325a227186f15180f95fba 452 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 329 340 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 TVD_01290 fde53d517a325a227186f15180f95fba 452 Pfam PF01189 16S rRNA methyltransferase RsmB/F 252 447 5.0E-54 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 TVD_01290 fde53d517a325a227186f15180f95fba 452 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 19 451 4.5E-104 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 TVD_01290 fde53d517a325a227186f15180f95fba 452 SUPERFAMILY SSF48013 17 161 1.8E-26 T 11-10-2018 IPR035926 NusB-like superfamily TVD_01290 fde53d517a325a227186f15180f95fba 452 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 432 449 1.4E-26 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TVD_01290 fde53d517a325a227186f15180f95fba 452 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 234 248 1.4E-26 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TVD_01290 fde53d517a325a227186f15180f95fba 452 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 380 396 1.4E-26 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TVD_01290 fde53d517a325a227186f15180f95fba 452 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 263 273 1.4E-26 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TVD_01290 fde53d517a325a227186f15180f95fba 452 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 330 342 1.4E-26 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase TVD_01290 fde53d517a325a227186f15180f95fba 452 SUPERFAMILY SSF53335 153 449 5.63E-71 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_01290 fde53d517a325a227186f15180f95fba 452 Gene3D G3DSA:3.40.50.150 243 450 3.8E-60 T 11-10-2018 TVD_01290 fde53d517a325a227186f15180f95fba 452 Gene3D G3DSA:3.30.70.1170 185 242 9.9E-17 T 11-10-2018 TVD_01290 fde53d517a325a227186f15180f95fba 452 Pfam PF01029 NusB family 17 138 1.4E-16 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 TVD_02240 3eaa3f118f0adb891c0e99747787a41f 324 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TVD_02240 3eaa3f118f0adb891c0e99747787a41f 324 SUPERFAMILY SSF51391 124 323 1.44E-39 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TVD_02240 3eaa3f118f0adb891c0e99747787a41f 324 SUPERFAMILY SSF55811 11 136 4.74E-33 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TVD_02240 3eaa3f118f0adb891c0e99747787a41f 324 TIGRFAM TIGR00586 mutt: mutator mutT protein 15 137 1.0E-30 T 11-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 TVD_02240 3eaa3f118f0adb891c0e99747787a41f 324 Gene3D G3DSA:3.90.79.10 13 136 1.6E-32 T 11-10-2018 TVD_02240 3eaa3f118f0adb891c0e99747787a41f 324 Pfam PF02581 Thiamine monophosphate synthase 142 321 5.1E-31 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TVD_02240 3eaa3f118f0adb891c0e99747787a41f 324 Gene3D G3DSA:3.20.20.70 137 324 2.0E-37 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_02240 3eaa3f118f0adb891c0e99747787a41f 324 PRINTS PR00502 NUDIX hydrolase family signature 57 72 8.1E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TVD_02240 3eaa3f118f0adb891c0e99747787a41f 324 PRINTS PR00502 NUDIX hydrolase family signature 43 57 8.1E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TVD_02240 3eaa3f118f0adb891c0e99747787a41f 324 Pfam PF00293 NUDIX domain 17 133 1.7E-17 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 Pfam PF16124 RecQ zinc-binding 356 418 3.4E-21 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 SMART SM00956 425 528 2.2E-56 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 22 477 1.6E-154 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 SUPERFAMILY SSF47819 552 626 5.23E-24 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 Gene3D G3DSA:1.10.10.10 354 538 7.3E-54 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 SUPERFAMILY SSF52540 215 473 2.39E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 SMART SM00487 29 223 7.7E-29 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 SUPERFAMILY SSF52540 19 203 1.1E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 Gene3D G3DSA:1.10.150.80 549 627 5.7E-25 T 11-10-2018 TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 Gene3D G3DSA:3.40.50.300 216 353 7.3E-37 T 11-10-2018 TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 Pfam PF00271 Helicase conserved C-terminal domain 237 343 3.5E-15 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 22 624 5.4E-243 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 SMART SM00490 263 344 6.8E-24 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 Pfam PF00270 DEAD/DEAH box helicase 37 192 8.4E-18 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 Pfam PF00570 HRDC domain 557 623 1.1E-23 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 Pfam PF09382 RQC domain 420 531 3.2E-41 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 Gene3D G3DSA:3.40.50.300 11 215 2.0E-76 T 11-10-2018 TVD_10435 d1dd7daf778d15581ec38aca83138d4a 629 SMART SM00341 553 626 8.1E-15 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 TVD_12495 4ddc678f2c511d5360d56da2588fd88b 409 SUPERFAMILY SSF103473 9 396 1.7E-58 T 11-10-2018 IPR036259 MFS transporter superfamily TVD_12495 4ddc678f2c511d5360d56da2588fd88b 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 87 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TVD_12495 4ddc678f2c511d5360d56da2588fd88b 409 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 367 2.6E-68 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 TVD_12495 4ddc678f2c511d5360d56da2588fd88b 409 PRINTS PR01036 Tetracycline resistance protein TetB signature 264 289 2.0E-5 T 11-10-2018 TVD_12495 4ddc678f2c511d5360d56da2588fd88b 409 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 2.0E-5 T 11-10-2018 TVD_12495 4ddc678f2c511d5360d56da2588fd88b 409 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 2.0E-5 T 11-10-2018 TVD_12495 4ddc678f2c511d5360d56da2588fd88b 409 Gene3D G3DSA:1.20.1720.10 17 396 2.7E-86 T 11-10-2018 TVD_12495 4ddc678f2c511d5360d56da2588fd88b 409 Pfam PF07690 Major Facilitator Superfamily 23 357 6.7E-42 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TVD_01800 100f59be53498b5be250221e724bccc3 792 SUPERFAMILY SSF56601 216 770 1.23E-118 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TVD_01800 100f59be53498b5be250221e724bccc3 792 Pfam PF17092 Penicillin-binding protein OB-like domain 321 416 1.0E-8 T 11-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_01800 100f59be53498b5be250221e724bccc3 792 Pfam PF00912 Transglycosylase 59 234 1.9E-65 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_01800 100f59be53498b5be250221e724bccc3 792 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 69 723 1.2E-173 T 11-10-2018 TVD_01800 100f59be53498b5be250221e724bccc3 792 SUPERFAMILY SSF53955 47 259 1.43E-74 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TVD_01800 100f59be53498b5be250221e724bccc3 792 Pfam PF00905 Penicillin binding protein transpeptidase domain 418 600 3.3E-21 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TVD_01800 100f59be53498b5be250221e724bccc3 792 Gene3D G3DSA:1.10.3810.10 52 247 1.4E-77 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_04220 4f0422cb06d95de551d82de4ad580b0c 134 Gene3D G3DSA:3.30.310.70 6 130 9.3E-42 T 11-10-2018 IPR035923 TT1751-like domain superfamily TVD_04220 4f0422cb06d95de551d82de4ad580b0c 134 PIRSF PIRSF021774 3 132 3.5E-38 T 11-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 TVD_04220 4f0422cb06d95de551d82de4ad580b0c 134 Pfam PF03625 Domain of unknown function DUF302 38 101 3.3E-25 T 11-10-2018 IPR005180 Domain of unknown function DUF302 TVD_04220 4f0422cb06d95de551d82de4ad580b0c 134 SUPERFAMILY SSF103247 8 127 1.44E-32 T 11-10-2018 IPR035923 TT1751-like domain superfamily TVD_04740 4494245f967a8eda4aacb19ef41854ee 261 SUPERFAMILY SSF53790 10 255 1.83E-45 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TVD_04740 4494245f967a8eda4aacb19ef41854ee 261 Gene3D G3DSA:3.40.1010.10 6 122 4.0E-25 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TVD_04740 4494245f967a8eda4aacb19ef41854ee 261 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 12 256 1.3E-82 T 11-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 TVD_04740 4494245f967a8eda4aacb19ef41854ee 261 Gene3D G3DSA:3.30.950.10 123 258 1.2E-47 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TVD_04740 4494245f967a8eda4aacb19ef41854ee 261 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 221 1.9E-31 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TVD_12740 90d0fce52cdf4ee3dd19f1691e9cfecc 219 Pfam PF06226 Protein of unknown function (DUF1007) 12 218 2.2E-51 T 11-10-2018 IPR010412 Protein of unknown function DUF1007 TVD_08670 cbc19f4795fd0f057888dbfc551871c7 178 PIRSF PIRSF006443 2 170 9.6E-62 T 11-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 TVD_08670 cbc19f4795fd0f057888dbfc551871c7 178 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 16 156 1.1E-32 T 11-10-2018 IPR001453 MoaB/Mog domain TVD_08670 cbc19f4795fd0f057888dbfc551871c7 178 Gene3D G3DSA:3.40.980.10 7 175 4.0E-47 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily TVD_08670 cbc19f4795fd0f057888dbfc551871c7 178 SUPERFAMILY SSF53218 10 173 4.97E-44 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily TVD_08670 cbc19f4795fd0f057888dbfc551871c7 178 SMART SM00852 18 162 1.5E-30 T 11-10-2018 IPR001453 MoaB/Mog domain TVD_08670 cbc19f4795fd0f057888dbfc551871c7 178 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 76 89 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 TVD_08670 cbc19f4795fd0f057888dbfc551871c7 178 Pfam PF00994 Probable molybdopterin binding domain 18 159 2.3E-32 T 11-10-2018 IPR001453 MoaB/Mog domain TVD_08670 cbc19f4795fd0f057888dbfc551871c7 178 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 13 173 1.5E-79 T 11-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 TVD_12560 550aab072125a04b1b8070d200b56c4b 259 Pfam PF04366 Las17-binding protein actin regulator 107 224 2.5E-28 T 11-10-2018 IPR007461 Ysc84 actin-binding domain TVD_01485 9a84f4abcbd21ce5a7f846688e50eb98 360 Pfam PF02445 Quinolinate synthetase A protein 37 347 1.2E-102 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 TVD_01485 9a84f4abcbd21ce5a7f846688e50eb98 360 Gene3D G3DSA:3.40.50.10800 120 347 3.1E-92 T 11-10-2018 TVD_01485 9a84f4abcbd21ce5a7f846688e50eb98 360 SUPERFAMILY SSF142754 33 348 1.57E-104 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 TVD_01485 9a84f4abcbd21ce5a7f846688e50eb98 360 Gene3D G3DSA:3.40.50.10800 36 329 3.1E-92 T 11-10-2018 TVD_01485 9a84f4abcbd21ce5a7f846688e50eb98 360 Gene3D G3DSA:3.40.50.10800 205 300 3.1E-92 T 11-10-2018 TVD_01485 9a84f4abcbd21ce5a7f846688e50eb98 360 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 31 348 5.9E-109 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 TVD_06580 35f1d722bc325d078c862d4c3d40ec51 155 PIRSF PIRSF000027 8 155 1.2E-26 T 11-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 TVD_06580 35f1d722bc325d078c862d4c3d40ec51 155 Pfam PF01322 Cytochrome C' 36 153 4.6E-30 T 11-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 TVD_06580 35f1d722bc325d078c862d4c3d40ec51 155 Gene3D G3DSA:1.20.120.10 29 155 5.5E-33 T 11-10-2018 TVD_06580 35f1d722bc325d078c862d4c3d40ec51 155 SUPERFAMILY SSF47175 31 154 1.47E-29 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 TVD_09365 93b47e919b45988240dcc3423d581b69 215 Gene3D G3DSA:1.20.910.10 13 205 1.1E-35 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TVD_09365 93b47e919b45988240dcc3423d581b69 215 SUPERFAMILY SSF48613 24 202 2.59E-26 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 TVD_09140 f939c13bb93bc9083f4afa3446c561d5 412 SUPERFAMILY SSF47240 60 385 6.09E-97 T 11-10-2018 IPR009078 Ferritin-like superfamily TVD_09140 f939c13bb93bc9083f4afa3446c561d5 412 PIRSF PIRSF000355 66 412 1.7E-139 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TVD_09140 f939c13bb93bc9083f4afa3446c561d5 412 Gene3D G3DSA:1.10.620.20 70 405 1.6E-111 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 TVD_09140 f939c13bb93bc9083f4afa3446c561d5 412 Pfam PF00268 Ribonucleotide reductase, small chain 92 379 3.4E-86 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 TVD_12875 f454df94337109db9812c0c359026ccb 340 SUPERFAMILY SSF53067 3 122 1.31E-30 T 11-10-2018 TVD_12875 f454df94337109db9812c0c359026ccb 340 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 61.919 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 TVD_12875 f454df94337109db9812c0c359026ccb 340 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 310 3.7E-126 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 TVD_12875 f454df94337109db9812c0c359026ccb 340 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 TVD_12875 f454df94337109db9812c0c359026ccb 340 Gene3D G3DSA:3.30.420.40 3 312 5.3E-122 T 11-10-2018 TVD_12875 f454df94337109db9812c0c359026ccb 340 Gene3D G3DSA:3.30.420.40 129 290 5.3E-122 T 11-10-2018 TVD_12875 f454df94337109db9812c0c359026ccb 340 SUPERFAMILY SSF53067 102 305 7.45E-41 T 11-10-2018 TVD_12875 f454df94337109db9812c0c359026ccb 340 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 303 1.8E-109 T 11-10-2018 IPR017861 Kae1/TsaD family TVD_12875 f454df94337109db9812c0c359026ccb 340 Pfam PF00814 Glycoprotease family 24 303 4.2E-98 T 11-10-2018 IPR000905 Gcp-like domain TVD_12875 f454df94337109db9812c0c359026ccb 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 3.2E-48 T 11-10-2018 IPR017861 Kae1/TsaD family TVD_12875 f454df94337109db9812c0c359026ccb 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 3.2E-48 T 11-10-2018 IPR017861 Kae1/TsaD family TVD_12875 f454df94337109db9812c0c359026ccb 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 260 269 3.2E-48 T 11-10-2018 IPR017861 Kae1/TsaD family TVD_12875 f454df94337109db9812c0c359026ccb 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 3.2E-48 T 11-10-2018 IPR017861 Kae1/TsaD family TVD_12875 f454df94337109db9812c0c359026ccb 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 3.2E-48 T 11-10-2018 IPR017861 Kae1/TsaD family TVD_12875 f454df94337109db9812c0c359026ccb 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 3.2E-48 T 11-10-2018 IPR017861 Kae1/TsaD family TVD_01940 4e7bb584a5d0f3921b702458f0cb0a48 152 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 147 7.2E-53 T 11-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 TVD_01940 4e7bb584a5d0f3921b702458f0cb0a48 152 Pfam PF02470 MlaD protein 38 117 1.1E-23 T 11-10-2018 IPR003399 Mce/MlaD TVD_10840 5a6373b4399059a18c5772234baac025 369 SUPERFAMILY SSF50621 240 365 4.88E-42 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TVD_10840 5a6373b4399059a18c5772234baac025 369 Pfam PF00842 Alanine racemase, C-terminal domain 246 366 3.7E-37 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_10840 5a6373b4399059a18c5772234baac025 369 Hamap MF_01201 Alanine racemase. 2 369 28.731 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_10840 5a6373b4399059a18c5772234baac025 369 SMART SM01005 246 368 8.4E-56 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_10840 5a6373b4399059a18c5772234baac025 369 SUPERFAMILY SSF51419 10 230 2.04E-50 T 11-10-2018 IPR029066 PLP-binding barrel TVD_10840 5a6373b4399059a18c5772234baac025 369 TIGRFAM TIGR00492 alr: alanine racemase 4 365 4.3E-82 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_10840 5a6373b4399059a18c5772234baac025 369 Gene3D G3DSA:2.40.37.10 226 364 5.8E-103 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TVD_10840 5a6373b4399059a18c5772234baac025 369 Gene3D G3DSA:3.20.20.10 12 225 5.8E-103 T 11-10-2018 IPR029066 PLP-binding barrel TVD_10840 5a6373b4399059a18c5772234baac025 369 PRINTS PR00992 Alanine racemase signature 27 43 7.4E-50 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_10840 5a6373b4399059a18c5772234baac025 369 PRINTS PR00992 Alanine racemase signature 62 80 7.4E-50 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_10840 5a6373b4399059a18c5772234baac025 369 PRINTS PR00992 Alanine racemase signature 279 294 7.4E-50 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_10840 5a6373b4399059a18c5772234baac025 369 PRINTS PR00992 Alanine racemase signature 121 133 7.4E-50 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_10840 5a6373b4399059a18c5772234baac025 369 PRINTS PR00992 Alanine racemase signature 156 167 7.4E-50 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_10840 5a6373b4399059a18c5772234baac025 369 PRINTS PR00992 Alanine racemase signature 200 227 7.4E-50 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_10840 5a6373b4399059a18c5772234baac025 369 PRINTS PR00992 Alanine racemase signature 352 365 7.4E-50 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_10840 5a6373b4399059a18c5772234baac025 369 PRINTS PR00992 Alanine racemase signature 262 277 7.4E-50 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_10840 5a6373b4399059a18c5772234baac025 369 PRINTS PR00992 Alanine racemase signature 300 317 7.4E-50 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_10840 5a6373b4399059a18c5772234baac025 369 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_10840 5a6373b4399059a18c5772234baac025 369 Pfam PF01168 Alanine racemase, N-terminal domain 10 227 6.5E-51 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_08290 7bbc016356fc3747ba06bd7a435f8ae1 416 SUPERFAMILY SSF53098 125 294 2.49E-21 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_08290 7bbc016356fc3747ba06bd7a435f8ae1 416 Pfam PF13482 RNase_H superfamily 125 288 1.8E-30 T 11-10-2018 IPR038720 YprB, ribonuclease H-like domain TVD_12055 cb8181ec8e767068312bdadf6b5e6a3e 228 SUPERFAMILY SSF53098 13 207 3.32E-51 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_12055 cb8181ec8e767068312bdadf6b5e6a3e 228 SMART SM00479 22 207 5.9E-20 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TVD_12055 cb8181ec8e767068312bdadf6b5e6a3e 228 Pfam PF00929 Exonuclease 24 198 4.8E-26 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TVD_12055 cb8181ec8e767068312bdadf6b5e6a3e 228 Hamap MF_00157 Ribonuclease T [rnt]. 1 228 84.304 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 TVD_12055 cb8181ec8e767068312bdadf6b5e6a3e 228 TIGRFAM TIGR01298 RNaseT: ribonuclease T 14 210 3.1E-84 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 TVD_12055 cb8181ec8e767068312bdadf6b5e6a3e 228 Gene3D G3DSA:3.30.420.10 13 215 4.3E-52 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TVD_04745 b451a6fa704478769a129399a750830e 266 Gene3D G3DSA:3.40.50.2300 182 260 1.5E-5 T 11-10-2018 TVD_04745 b451a6fa704478769a129399a750830e 266 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 18 257 3.7E-47 T 11-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 TVD_04745 b451a6fa704478769a129399a750830e 266 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 18 258 7.4E-69 T 11-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 TVD_08305 dbd62c10c02ed3c4e1b5b3f03585643a 98 Gene3D G3DSA:1.10.10.60 9 90 2.4E-7 T 11-10-2018 TVD_08305 dbd62c10c02ed3c4e1b5b3f03585643a 98 SUPERFAMILY SSF46689 4 96 8.78E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_08305 dbd62c10c02ed3c4e1b5b3f03585643a 98 Pfam PF01527 Transposase 3 76 7.8E-14 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 TVD_07025 ee0e2698e04f5f5b00f97bebbc5362ea 78 Pfam PF03646 FlaG protein 4 65 7.2E-19 T 11-10-2018 IPR005186 FlaG protein TVD_07025 ee0e2698e04f5f5b00f97bebbc5362ea 78 SUPERFAMILY SSF160214 2 64 2.09E-19 T 11-10-2018 IPR035924 FlaG-like superfamily TVD_07025 ee0e2698e04f5f5b00f97bebbc5362ea 78 Gene3D G3DSA:3.30.160.170 1 69 7.9E-15 T 11-10-2018 IPR035924 FlaG-like superfamily TVD_09480 e6befdd0a4ed4faff595214919065140 110 PRINTS PR00152 RuBisCO small subunit signature 11 37 3.9E-6 T 11-10-2018 IPR024681 Ribulose bisphosphate carboxylase, small chain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 TVD_09480 e6befdd0a4ed4faff595214919065140 110 PRINTS PR00152 RuBisCO small subunit signature 39 54 3.9E-6 T 11-10-2018 IPR024681 Ribulose bisphosphate carboxylase, small chain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 TVD_09480 e6befdd0a4ed4faff595214919065140 110 SUPERFAMILY SSF55239 6 108 4.32E-39 T 11-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 TVD_09480 e6befdd0a4ed4faff595214919065140 110 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 13 108 3.0E-38 T 11-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 TVD_09480 e6befdd0a4ed4faff595214919065140 110 SMART SM00961 12 109 4.2E-43 T 11-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 TVD_09480 e6befdd0a4ed4faff595214919065140 110 Gene3D G3DSA:3.30.190.10 1 110 9.5E-44 T 11-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 TVD_03375 a4e9f3efe0f8b6b803579160d2857aa1 458 Gene3D G3DSA:1.10.3710.10 359 453 4.8E-30 T 11-10-2018 TVD_03375 a4e9f3efe0f8b6b803579160d2857aa1 458 Pfam PF12002 MgsA AAA+ ATPase C terminal 281 447 2.7E-60 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal TVD_03375 a4e9f3efe0f8b6b803579160d2857aa1 458 SUPERFAMILY SSF48019 265 447 4.42E-67 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 TVD_03375 a4e9f3efe0f8b6b803579160d2857aa1 458 Pfam PF16193 AAA C-terminal domain 207 280 5.2E-21 T 11-10-2018 IPR032423 AAA C-terminal domain TVD_03375 a4e9f3efe0f8b6b803579160d2857aa1 458 SUPERFAMILY SSF52540 32 246 1.2E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_03375 a4e9f3efe0f8b6b803579160d2857aa1 458 Gene3D G3DSA:3.40.50.300 27 182 5.5E-43 T 11-10-2018 TVD_03375 a4e9f3efe0f8b6b803579160d2857aa1 458 SMART SM00382 67 187 1.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_03375 a4e9f3efe0f8b6b803579160d2857aa1 458 Gene3D G3DSA:1.20.272.10 254 358 1.9E-38 T 11-10-2018 TVD_03375 a4e9f3efe0f8b6b803579160d2857aa1 458 Gene3D G3DSA:1.10.8.60 183 251 4.0E-16 T 11-10-2018 TVD_03375 a4e9f3efe0f8b6b803579160d2857aa1 458 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 35 155 1.2E-14 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 TVD_06750 3e70cf5db1a09dd1a8792bd80d9fd010 108 Gene3D G3DSA:3.30.1390.10 4 108 6.8E-45 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TVD_06750 3e70cf5db1a09dd1a8792bd80d9fd010 108 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 25 104 2.9E-35 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 TVD_06750 3e70cf5db1a09dd1a8792bd80d9fd010 108 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 7 103 29.766 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS TVD_06750 3e70cf5db1a09dd1a8792bd80d9fd010 108 SUPERFAMILY SSF54736 23 107 4.5E-33 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 314 340 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 SUPERFAMILY SSF88659 194 267 1.57E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 15 355 38.752 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 145 158 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 Gene3D G3DSA:1.10.10.10 194 268 2.0E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 Pfam PF04545 Sigma-70, region 4 289 342 3.1E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 118 344 1.2E-37 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 SUPERFAMILY SSF88659 252 348 2.06E-24 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 PRINTS PR00046 Major sigma-70 factor signature 293 305 2.2E-24 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 PRINTS PR00046 Major sigma-70 factor signature 169 177 2.2E-24 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 PRINTS PR00046 Major sigma-70 factor signature 145 158 2.2E-24 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 PRINTS PR00046 Major sigma-70 factor signature 314 329 2.2E-24 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 PRINTS PR00046 Major sigma-70 factor signature 329 340 2.2E-24 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 Pfam PF00140 Sigma-70 factor, region 1.2 83 115 6.2E-10 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 Pfam PF04542 Sigma-70 region 2 121 190 8.1E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 79 354 7.1E-125 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 SUPERFAMILY SSF88946 83 191 4.32E-43 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 Gene3D G3DSA:1.10.10.10 271 348 4.7E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 Pfam PF04539 Sigma-70 region 3 202 273 7.0E-18 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 TVD_05725 d4e3df81562f18ac2d9010132fa808c3 358 Gene3D G3DSA:1.10.601.10 72 193 9.4E-48 T 11-10-2018 TVD_13170 bcf75e5f80aa7097a9d318d3e0ec0932 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_13170 bcf75e5f80aa7097a9d318d3e0ec0932 83 Pfam PF00037 4Fe-4S binding domain 6 25 9.5E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TVD_13170 bcf75e5f80aa7097a9d318d3e0ec0932 83 Gene3D G3DSA:3.30.70.20 2 81 3.5E-34 T 11-10-2018 TVD_13170 bcf75e5f80aa7097a9d318d3e0ec0932 83 SUPERFAMILY SSF54862 4 71 4.89E-19 T 11-10-2018 TVD_11490 899ec87d8480b6f25b550b135c961556 135 SUPERFAMILY SSF54427 33 132 1.92E-33 T 11-10-2018 IPR032710 NTF2-like domain superfamily TVD_11490 899ec87d8480b6f25b550b135c961556 135 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 8 131 25.85 T 11-10-2018 IPR023006 Uncharacterised protein family UPF0225 TVD_11490 899ec87d8480b6f25b550b135c961556 135 Gene3D G3DSA:3.10.450.50 10 133 4.0E-35 T 11-10-2018 TVD_11455 f8c6e6f39ae84b973cdce43892b70532 434 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 152 368 3.1E-49 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 TVD_11455 f8c6e6f39ae84b973cdce43892b70532 434 Pfam PF01476 LysM domain 389 431 1.1E-12 T 11-10-2018 IPR018392 LysM domain TVD_11455 f8c6e6f39ae84b973cdce43892b70532 434 Gene3D G3DSA:3.40.630.40 138 378 4.2E-77 T 11-10-2018 TVD_11455 f8c6e6f39ae84b973cdce43892b70532 434 SMART SM00257 388 431 1.8E-13 T 11-10-2018 IPR018392 LysM domain TVD_11455 f8c6e6f39ae84b973cdce43892b70532 434 Gene3D G3DSA:3.10.350.10 381 434 2.6E-14 T 11-10-2018 IPR036779 LysM domain superfamily TVD_11455 f8c6e6f39ae84b973cdce43892b70532 434 Pfam PF11741 AMIN domain 27 121 8.5E-15 T 11-10-2018 IPR021731 AMIN domain TVD_11455 f8c6e6f39ae84b973cdce43892b70532 434 Gene3D G3DSA:2.60.40.3500 11 123 7.2E-25 T 11-10-2018 TVD_11455 f8c6e6f39ae84b973cdce43892b70532 434 SMART SM00646 212 368 1.7E-53 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 TVD_11455 f8c6e6f39ae84b973cdce43892b70532 434 SUPERFAMILY SSF54106 388 431 4.58E-10 T 11-10-2018 TVD_11455 f8c6e6f39ae84b973cdce43892b70532 434 SUPERFAMILY SSF53187 150 371 4.08E-53 T 11-10-2018 TVD_03135 835240c8366ef754a26dd9a12062c8dd 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 7.7E-23 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_03135 835240c8366ef754a26dd9a12062c8dd 91 SUPERFAMILY SSF63562 1 75 3.31E-24 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TVD_03135 835240c8366ef754a26dd9a12062c8dd 91 Pfam PF01192 RNA polymerase Rpb6 8 59 6.7E-16 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TVD_03135 835240c8366ef754a26dd9a12062c8dd 91 SMART SM01409 8 60 6.5E-17 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TVD_03135 835240c8366ef754a26dd9a12062c8dd 91 Gene3D G3DSA:3.90.940.10 1 89 1.2E-25 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 TVD_03135 835240c8366ef754a26dd9a12062c8dd 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 17.244 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TVD_08155 b03e08c66bd1665c04d21d1c7ad13b4b 1044 SMART SM00487 12 320 0.0019 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_08155 b03e08c66bd1665c04d21d1c7ad13b4b 1044 Gene3D G3DSA:3.40.50.300 792 934 2.4E-13 T 11-10-2018 TVD_08155 b03e08c66bd1665c04d21d1c7ad13b4b 1044 SUPERFAMILY SSF52540 870 923 1.37E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_08155 b03e08c66bd1665c04d21d1c7ad13b4b 1044 SUPERFAMILY SSF52540 14 294 7.93E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_08155 b03e08c66bd1665c04d21d1c7ad13b4b 1044 Pfam PF00271 Helicase conserved C-terminal domain 870 922 2.4E-6 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_06355 487fed4c973fa751e60bc751fcfbe89b 371 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 371 38.745 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TVD_06355 487fed4c973fa751e60bc751fcfbe89b 371 SUPERFAMILY SSF52172 2 109 7.83E-29 T 11-10-2018 IPR011006 CheY-like superfamily TVD_06355 487fed4c973fa751e60bc751fcfbe89b 371 PIRSF PIRSF000876 1 370 4.1E-127 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TVD_06355 487fed4c973fa751e60bc751fcfbe89b 371 Pfam PF00072 Response regulator receiver domain 5 109 4.5E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_06355 487fed4c973fa751e60bc751fcfbe89b 371 SUPERFAMILY SSF52738 185 368 4.45E-61 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal TVD_06355 487fed4c973fa751e60bc751fcfbe89b 371 Gene3D G3DSA:3.40.50.2300 2 130 5.9E-33 T 11-10-2018 TVD_06355 487fed4c973fa751e60bc751fcfbe89b 371 Pfam PF01339 CheB methylesterase 188 366 4.1E-56 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TVD_06355 487fed4c973fa751e60bc751fcfbe89b 371 SMART SM00448 3 126 1.2E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_06355 487fed4c973fa751e60bc751fcfbe89b 371 Gene3D G3DSA:3.40.50.180 182 369 1.6E-62 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal TVD_02505 217d11154afd24e427a5c7c52ecb49be 450 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 441 73.317 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 TVD_02505 217d11154afd24e427a5c7c52ecb49be 450 SMART SM00729 147 367 1.4E-59 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TVD_02505 217d11154afd24e427a5c7c52ecb49be 450 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TVD_02505 217d11154afd24e427a5c7c52ecb49be 450 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 3.5E-28 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 TVD_02505 217d11154afd24e427a5c7c52ecb49be 450 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 6.4E-145 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 TVD_02505 217d11154afd24e427a5c7c52ecb49be 450 Pfam PF04055 Radical SAM superfamily 151 325 1.5E-27 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TVD_02505 217d11154afd24e427a5c7c52ecb49be 450 Gene3D G3DSA:3.40.50.12160 3 137 2.0E-32 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily TVD_02505 217d11154afd24e427a5c7c52ecb49be 450 SUPERFAMILY SSF102114 121 375 8.89E-61 T 11-10-2018 TVD_02505 217d11154afd24e427a5c7c52ecb49be 450 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 1.9E-176 T 11-10-2018 TVD_02505 217d11154afd24e427a5c7c52ecb49be 450 Pfam PF01938 TRAM domain 379 439 3.0E-14 T 11-10-2018 IPR002792 TRAM domain TVD_02505 217d11154afd24e427a5c7c52ecb49be 450 Gene3D G3DSA:3.80.30.20 145 381 3.9E-82 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TVD_00090 1034ab1de7c9b451dea973f1b450cb9e 431 Gene3D G3DSA:3.40.50.300 1 223 3.9E-71 T 11-10-2018 TVD_00090 1034ab1de7c9b451dea973f1b450cb9e 431 Pfam PF00271 Helicase conserved C-terminal domain 248 351 7.8E-28 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_00090 1034ab1de7c9b451dea973f1b450cb9e 431 Gene3D G3DSA:3.40.50.300 231 397 3.1E-44 T 11-10-2018 TVD_00090 1034ab1de7c9b451dea973f1b450cb9e 431 Pfam PF00270 DEAD/DEAH box helicase 33 207 5.0E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TVD_00090 1034ab1de7c9b451dea973f1b450cb9e 431 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site TVD_00090 1034ab1de7c9b451dea973f1b450cb9e 431 SMART SM00490 270 351 9.7E-28 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_00090 1034ab1de7c9b451dea973f1b450cb9e 431 SMART SM00487 28 234 4.4E-52 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_00090 1034ab1de7c9b451dea973f1b450cb9e 431 SUPERFAMILY SSF52540 84 369 7.2E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_00090 1034ab1de7c9b451dea973f1b450cb9e 431 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.786 T 11-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 TVD_02010 90e69f262996fdb8139e2fc8f1924ce9 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 2.0E-19 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_02010 90e69f262996fdb8139e2fc8f1924ce9 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 42 55 2.0E-19 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_02010 90e69f262996fdb8139e2fc8f1924ce9 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 2.0E-19 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_02010 90e69f262996fdb8139e2fc8f1924ce9 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 181 194 2.0E-19 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_02010 90e69f262996fdb8139e2fc8f1924ce9 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 28 41 2.0E-19 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_02010 90e69f262996fdb8139e2fc8f1924ce9 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 2.0E-19 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_02010 90e69f262996fdb8139e2fc8f1924ce9 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 2.0E-19 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_02010 90e69f262996fdb8139e2fc8f1924ce9 223 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 5 184 3.1E-23 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_02010 90e69f262996fdb8139e2fc8f1924ce9 223 Gene3D G3DSA:3.40.50.1000 5 217 1.3E-75 T 11-10-2018 IPR023214 HAD superfamily TVD_02010 90e69f262996fdb8139e2fc8f1924ce9 223 Gene3D G3DSA:1.10.150.240 16 90 1.3E-75 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TVD_02010 90e69f262996fdb8139e2fc8f1924ce9 223 SUPERFAMILY SSF56784 2 217 3.71E-54 T 11-10-2018 IPR036412 HAD-like superfamily TVD_02010 90e69f262996fdb8139e2fc8f1924ce9 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 89 191 1.6E-16 T 11-10-2018 TVD_02010 90e69f262996fdb8139e2fc8f1924ce9 223 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 4 197 1.8E-56 T 11-10-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 TVD_11510 874b222be38c5974fe9d6c94ddd0c576 224 Pfam PF02698 DUF218 domain 55 189 1.5E-25 T 11-10-2018 IPR003848 Domain of unknown function DUF218 TVD_10885 aa03088b13bcabeffd01db0a679acc8c 431 Gene3D G3DSA:1.10.300.10 102 201 1.8E-101 T 11-10-2018 TVD_10885 aa03088b13bcabeffd01db0a679acc8c 431 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 4.5E-185 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TVD_10885 aa03088b13bcabeffd01db0a679acc8c 431 SUPERFAMILY SSF52540 4 430 1.91E-176 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10885 aa03088b13bcabeffd01db0a679acc8c 431 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TVD_10885 aa03088b13bcabeffd01db0a679acc8c 431 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 431 213.699 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TVD_10885 aa03088b13bcabeffd01db0a679acc8c 431 Pfam PF00709 Adenylosuccinate synthetase 5 422 3.7E-180 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TVD_10885 aa03088b13bcabeffd01db0a679acc8c 431 Gene3D G3DSA:3.90.170.10 267 431 3.2E-69 T 11-10-2018 TVD_10885 aa03088b13bcabeffd01db0a679acc8c 431 SMART SM00788 4 424 7.2E-298 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TVD_10885 aa03088b13bcabeffd01db0a679acc8c 431 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 TVD_10885 aa03088b13bcabeffd01db0a679acc8c 431 Gene3D G3DSA:3.40.440.10 6 249 1.8E-101 T 11-10-2018 TVD_05085 bc7049edda7644f903ee5a803004fddc 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 377 1.9E-7 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TVD_05085 bc7049edda7644f903ee5a803004fddc 388 SUPERFAMILY SSF51735 1 194 2.47E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_05085 bc7049edda7644f903ee5a803004fddc 388 SUPERFAMILY SSF52413 283 388 3.79E-27 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 TVD_05085 bc7049edda7644f903ee5a803004fddc 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 170 6.1E-35 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TVD_05085 bc7049edda7644f903ee5a803004fddc 388 PIRSF PIRSF500134 340 388 16.0 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 TVD_05085 bc7049edda7644f903ee5a803004fddc 388 PIRSF PIRSF500134 1 374 2.8E-123 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 TVD_05085 bc7049edda7644f903ee5a803004fddc 388 SMART SM00984 300 387 1.2E-13 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TVD_05085 bc7049edda7644f903ee5a803004fddc 388 Gene3D G3DSA:3.40.50.720 1 193 9.9E-63 T 11-10-2018 TVD_05085 bc7049edda7644f903ee5a803004fddc 388 Gene3D G3DSA:1.20.5.100 194 220 4.9E-20 T 11-10-2018 TVD_05085 bc7049edda7644f903ee5a803004fddc 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.8E-26 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 TVD_05085 bc7049edda7644f903ee5a803004fddc 388 SUPERFAMILY SSF48179 191 287 4.25E-30 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TVD_05085 bc7049edda7644f903ee5a803004fddc 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 6.0E-103 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TVD_05085 bc7049edda7644f903ee5a803004fddc 388 PIRSF PIRSF000124 1 388 5.6E-137 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 TVD_05085 bc7049edda7644f903ee5a803004fddc 388 Gene3D G3DSA:3.40.50.720 222 388 3.3E-64 T 11-10-2018 TVD_08065 26425cb7c700b8cc515c6b5957764866 348 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 247 317 7.3E-5 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TVD_08065 26425cb7c700b8cc515c6b5957764866 348 Gene3D G3DSA:2.40.30.160 217 334 2.0E-35 T 11-10-2018 TVD_08065 26425cb7c700b8cc515c6b5957764866 348 Gene3D G3DSA:3.30.70.1630 43 214 1.4E-35 T 11-10-2018 TVD_08065 26425cb7c700b8cc515c6b5957764866 348 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 208 272 4.0E-29 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site TVD_08065 26425cb7c700b8cc515c6b5957764866 348 Gene3D G3DSA:3.30.70.1400 46 133 1.4E-35 T 11-10-2018 TVD_08065 26425cb7c700b8cc515c6b5957764866 348 SUPERFAMILY SSF103025 22 263 2.83E-59 T 11-10-2018 TVD_08065 26425cb7c700b8cc515c6b5957764866 348 SUPERFAMILY SSF101790 265 344 5.69E-9 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal TVD_08065 26425cb7c700b8cc515c6b5957764866 348 Pfam PF01571 Aminomethyltransferase folate-binding domain 23 236 1.7E-13 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain TVD_08065 26425cb7c700b8cc515c6b5957764866 348 PIRSF PIRSF006487 7 342 2.2E-11 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 TVD_05320 706c0118567124ee098c06d22f974906 154 Pfam PF06146 Phosphate-starvation-inducible E 45 110 3.5E-19 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like TVD_05320 706c0118567124ee098c06d22f974906 154 PIRSF PIRSF029598 1 129 2.6E-31 T 11-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 TVD_03965 b7c7cca028ecd88fbd70f746c0709bb3 230 Gene3D G3DSA:1.10.3720.10 2 227 5.7E-51 T 11-10-2018 IPR035906 MetI-like superfamily TVD_03965 b7c7cca028ecd88fbd70f746c0709bb3 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 14 224 3.2E-66 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 TVD_03965 b7c7cca028ecd88fbd70f746c0709bb3 230 SUPERFAMILY SSF161098 5 221 5.76E-43 T 11-10-2018 IPR035906 MetI-like superfamily TVD_03965 b7c7cca028ecd88fbd70f746c0709bb3 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 226 3.0E-14 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TVD_08840 4e6e535044d22f72b699673fe2ba44a5 162 Gene3D G3DSA:3.40.50.12740 30 160 1.1E-35 T 11-10-2018 TVD_08840 4e6e535044d22f72b699673fe2ba44a5 162 Pfam PF00072 Response regulator receiver domain 33 144 5.1E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_08840 4e6e535044d22f72b699673fe2ba44a5 162 SUPERFAMILY SSF52172 28 155 3.84E-34 T 11-10-2018 IPR011006 CheY-like superfamily TVD_08840 4e6e535044d22f72b699673fe2ba44a5 162 SMART SM00448 31 144 2.4E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_02305 8901227c003daad42ccaebf4eadcf962 143 Gene3D G3DSA:1.10.10.250 73 141 1.3E-28 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily TVD_02305 8901227c003daad42ccaebf4eadcf962 143 Gene3D G3DSA:3.30.1550.10 2 72 3.5E-36 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily TVD_02305 8901227c003daad42ccaebf4eadcf962 143 SUPERFAMILY SSF46906 68 141 4.06E-27 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily TVD_02305 8901227c003daad42ccaebf4eadcf962 143 SMART SM00649 9 141 2.8E-89 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 TVD_02305 8901227c003daad42ccaebf4eadcf962 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 32.173 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 TVD_02305 8901227c003daad42ccaebf4eadcf962 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02305 8901227c003daad42ccaebf4eadcf962 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 6.5E-31 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal TVD_02305 8901227c003daad42ccaebf4eadcf962 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 5.1E-26 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 TVD_02305 8901227c003daad42ccaebf4eadcf962 143 SUPERFAMILY SSF54747 3 73 9.03E-31 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily TVD_02305 8901227c003daad42ccaebf4eadcf962 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 3.8E-67 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02305 8901227c003daad42ccaebf4eadcf962 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-15 T 11-10-2018 TVD_11980 c2b854bcb13410c04ac4c5dbf9346a2a 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TVD_11980 c2b854bcb13410c04ac4c5dbf9346a2a 425 SUPERFAMILY SSF53383 4 424 8.16E-132 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_11980 c2b854bcb13410c04ac4c5dbf9346a2a 425 Pfam PF00202 Aminotransferase class-III 32 394 2.4E-74 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TVD_11980 c2b854bcb13410c04ac4c5dbf9346a2a 425 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 5 424 9.3E-188 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 TVD_11980 c2b854bcb13410c04ac4c5dbf9346a2a 425 Gene3D G3DSA:3.90.1150.10 8 417 2.8E-177 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_11980 c2b854bcb13410c04ac4c5dbf9346a2a 425 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 425 103.467 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 TVD_11980 c2b854bcb13410c04ac4c5dbf9346a2a 425 Gene3D G3DSA:3.40.640.10 69 317 2.8E-177 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_03005 27746f9984b39703e25e3c0e60e7728c 495 Pfam PF08323 Starch synthase catalytic domain 2 237 4.0E-71 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 TVD_03005 27746f9984b39703e25e3c0e60e7728c 495 Gene3D G3DSA:3.40.50.2000 3 479 6.3E-175 T 11-10-2018 TVD_03005 27746f9984b39703e25e3c0e60e7728c 495 SUPERFAMILY SSF53756 3 484 2.32E-119 T 11-10-2018 TVD_03005 27746f9984b39703e25e3c0e60e7728c 495 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 480 7.8E-166 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 TVD_03005 27746f9984b39703e25e3c0e60e7728c 495 Gene3D G3DSA:3.40.50.2000 251 465 6.3E-175 T 11-10-2018 TVD_03005 27746f9984b39703e25e3c0e60e7728c 495 Pfam PF00534 Glycosyl transferases group 1 291 443 3.3E-14 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TVD_03005 27746f9984b39703e25e3c0e60e7728c 495 Hamap MF_00484 Glycogen synthase [glgA]. 1 481 43.456 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 TVD_07660 b8cb39c95a1cf6b947e026fa82301f20 135 Gene3D G3DSA:3.30.565.10 2 135 1.7E-20 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_07660 b8cb39c95a1cf6b947e026fa82301f20 135 Pfam PF13581 Histidine kinase-like ATPase domain 10 130 2.6E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_07660 b8cb39c95a1cf6b947e026fa82301f20 135 SUPERFAMILY SSF55874 31 124 6.2E-10 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_06085 77a1e0ade0b8b144bb417cec32fbf067 1026 Pfam PF04851 Type III restriction enzyme, res subunit 249 416 5.5E-15 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TVD_06085 77a1e0ade0b8b144bb417cec32fbf067 1026 Gene3D G3DSA:3.40.50.300 248 436 3.6E-49 T 11-10-2018 TVD_06085 77a1e0ade0b8b144bb417cec32fbf067 1026 SUPERFAMILY SSF52540 216 421 4.09E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06085 77a1e0ade0b8b144bb417cec32fbf067 1026 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 12 693 2.3E-163 T 11-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 TVD_06085 77a1e0ade0b8b144bb417cec32fbf067 1026 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 6 196 2.0E-34 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 TVD_06085 77a1e0ade0b8b144bb417cec32fbf067 1026 SMART SM00487 245 453 1.6E-10 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_06085 77a1e0ade0b8b144bb417cec32fbf067 1026 SUPERFAMILY SSF52540 269 681 1.33E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06085 77a1e0ade0b8b144bb417cec32fbf067 1026 Gene3D G3DSA:3.90.1570.50 90 246 2.1E-21 T 11-10-2018 TVD_06085 77a1e0ade0b8b144bb417cec32fbf067 1026 Gene3D G3DSA:3.40.50.300 439 698 2.4E-42 T 11-10-2018 TVD_00310 e7be04eb2bc47f6a9b251ac8311463c6 298 Gene3D G3DSA:3.40.50.300 12 289 1.7E-50 T 11-10-2018 TVD_00310 e7be04eb2bc47f6a9b251ac8311463c6 298 TIGRFAM TIGR03018 pepcterm_TyrKin: exopolysaccharide/PEP-CTERM locus tyrosine autokinase 58 264 1.4E-79 T 11-10-2018 TVD_00310 e7be04eb2bc47f6a9b251ac8311463c6 298 Pfam PF13614 AAA domain 96 256 3.3E-9 T 11-10-2018 IPR025669 AAA domain TVD_00310 e7be04eb2bc47f6a9b251ac8311463c6 298 SUPERFAMILY SSF52540 95 274 8.08E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04210 84e1c5630e507b38cea03ec2520c5e1c 421 SUPERFAMILY SSF54862 6 114 3.68E-18 T 11-10-2018 TVD_04210 84e1c5630e507b38cea03ec2520c5e1c 421 Pfam PF02754 Cysteine-rich domain 312 396 3.1E-12 T 11-10-2018 IPR004017 Cysteine-rich domain TVD_04210 84e1c5630e507b38cea03ec2520c5e1c 421 Pfam PF02754 Cysteine-rich domain 181 263 2.5E-10 T 11-10-2018 IPR004017 Cysteine-rich domain TVD_04210 84e1c5630e507b38cea03ec2520c5e1c 421 Pfam PF13183 4Fe-4S dicluster domain 22 89 2.8E-11 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TVD_04210 84e1c5630e507b38cea03ec2520c5e1c 421 Gene3D G3DSA:1.10.1060.10 3 105 2.6E-12 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_04210 84e1c5630e507b38cea03ec2520c5e1c 421 PIRSF PIRSF000139 6 417 1.2E-108 T 11-10-2018 TVD_04210 84e1c5630e507b38cea03ec2520c5e1c 421 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_00650 19fea293a55b1df467763ddc5f730233 120 SMART SM00448 2 115 6.3E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_00650 19fea293a55b1df467763ddc5f730233 120 Gene3D G3DSA:3.40.50.12740 1 120 3.0E-38 T 11-10-2018 TVD_00650 19fea293a55b1df467763ddc5f730233 120 SUPERFAMILY SSF52172 1 120 1.05E-37 T 11-10-2018 IPR011006 CheY-like superfamily TVD_00650 19fea293a55b1df467763ddc5f730233 120 Pfam PF00072 Response regulator receiver domain 4 115 1.4E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_05120 d254cf217de28e444b18cdf9524f6637 159 Pfam PF13302 Acetyltransferase (GNAT) domain 4 122 4.0E-14 T 11-10-2018 IPR000182 GNAT domain TVD_05120 d254cf217de28e444b18cdf9524f6637 159 SUPERFAMILY SSF55729 2 146 1.47E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_05120 d254cf217de28e444b18cdf9524f6637 159 Gene3D G3DSA:3.40.630.30 1 154 8.6E-39 T 11-10-2018 TVD_05120 d254cf217de28e444b18cdf9524f6637 159 TIGRFAM TIGR03585 PseH: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 2 143 7.1E-37 T 11-10-2018 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase TVD_00740 9d7671f08ad2abaed27d815746abe8e7 319 SUPERFAMILY SSF46785 8 63 1.73E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_00740 9d7671f08ad2abaed27d815746abe8e7 319 Pfam PF13280 WYL domain 143 315 8.2E-41 T 11-10-2018 IPR026881 WYL domain TVD_00740 9d7671f08ad2abaed27d815746abe8e7 319 Pfam PF08279 HTH domain 9 61 7.2E-9 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 TVD_00740 9d7671f08ad2abaed27d815746abe8e7 319 Gene3D G3DSA:1.10.10.10 1 64 2.8E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_03025 1e0bb5cc1cf9121f7420d96262118ba1 151 Pfam PF12276 Protein of unknown function (DUF3617) 14 151 1.9E-25 T 11-10-2018 IPR022061 Protein of unknown function DUF3617 TVD_01905 cb1ba7186cb310de569cf6546f8818e1 325 Pfam PF01380 SIS domain 41 173 4.2E-32 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TVD_01905 cb1ba7186cb310de569cf6546f8818e1 325 Pfam PF00571 CBS domain 202 258 4.2E-6 T 11-10-2018 IPR000644 CBS domain TVD_01905 cb1ba7186cb310de569cf6546f8818e1 325 Pfam PF00571 CBS domain 270 322 1.4E-9 T 11-10-2018 IPR000644 CBS domain TVD_01905 cb1ba7186cb310de569cf6546f8818e1 325 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 46 315 4.7E-112 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 TVD_01905 cb1ba7186cb310de569cf6546f8818e1 325 Gene3D G3DSA:3.10.580.10 198 322 5.8E-42 T 11-10-2018 TVD_01905 cb1ba7186cb310de569cf6546f8818e1 325 PIRSF PIRSF004692 2 325 4.8E-132 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 TVD_01905 cb1ba7186cb310de569cf6546f8818e1 325 SMART SM00116 279 324 0.067 T 11-10-2018 IPR000644 CBS domain TVD_01905 cb1ba7186cb310de569cf6546f8818e1 325 SMART SM00116 211 259 7.7 T 11-10-2018 IPR000644 CBS domain TVD_01905 cb1ba7186cb310de569cf6546f8818e1 325 SUPERFAMILY SSF53697 13 320 2.22E-68 T 11-10-2018 TVD_01905 cb1ba7186cb310de569cf6546f8818e1 325 Gene3D G3DSA:3.40.50.10490 6 197 2.8E-65 T 11-10-2018 TVD_11955 c5b9f3163db0b742aac57da9f59b6d2c 186 Gene3D G3DSA:3.90.79.10 2 158 3.0E-43 T 11-10-2018 TVD_11955 c5b9f3163db0b742aac57da9f59b6d2c 186 PRINTS PR00502 NUDIX hydrolase family signature 35 49 4.3E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TVD_11955 c5b9f3163db0b742aac57da9f59b6d2c 186 PRINTS PR00502 NUDIX hydrolase family signature 49 64 4.3E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TVD_11955 c5b9f3163db0b742aac57da9f59b6d2c 186 SUPERFAMILY SSF55811 8 155 3.93E-28 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TVD_11955 c5b9f3163db0b742aac57da9f59b6d2c 186 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TVD_11955 c5b9f3163db0b742aac57da9f59b6d2c 186 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 3 158 36.402 T 11-10-2018 IPR022927 RNA pyrophosphohydrolase RppH TVD_11955 c5b9f3163db0b742aac57da9f59b6d2c 186 Pfam PF00293 NUDIX domain 9 148 7.6E-22 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TVD_13500 e729e29366ebfb392d16978e7caf744e 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 6.0E-13 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_13500 e729e29366ebfb392d16978e7caf744e 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.915 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_13500 e729e29366ebfb392d16978e7caf744e 44 Pfam PF00468 Ribosomal protein L34 1 43 7.4E-24 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_13500 e729e29366ebfb392d16978e7caf744e 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_13500 e729e29366ebfb392d16978e7caf744e 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 42 1.5E-24 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_13470 4f6c9c69660090923ebad2391c933ea7 683 Gene3D G3DSA:1.10.1370.10 141 610 1.1E-256 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 TVD_13470 4f6c9c69660090923ebad2391c933ea7 683 Pfam PF01432 Peptidase family M3 223 677 5.8E-143 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 TVD_13470 4f6c9c69660090923ebad2391c933ea7 683 SUPERFAMILY SSF55486 2 677 4.56E-192 T 11-10-2018 TVD_13470 4f6c9c69660090923ebad2391c933ea7 683 Gene3D G3DSA:1.10.1370.40 14 675 1.1E-256 T 11-10-2018 TVD_02195 77acae7b0ca904fb0cc7d2fa8a9f2f1c 312 SUPERFAMILY SSF56059 104 302 1.73E-52 T 11-10-2018 TVD_02195 77acae7b0ca904fb0cc7d2fa8a9f2f1c 312 Pfam PF01820 D-ala D-ala ligase N-terminus 11 92 1.4E-20 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_02195 77acae7b0ca904fb0cc7d2fa8a9f2f1c 312 Gene3D G3DSA:3.30.470.20 92 302 2.0E-67 T 11-10-2018 TVD_02195 77acae7b0ca904fb0cc7d2fa8a9f2f1c 312 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 11 304 6.0E-93 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_02195 77acae7b0ca904fb0cc7d2fa8a9f2f1c 312 Gene3D G3DSA:3.40.50.20 1 91 1.7E-30 T 11-10-2018 TVD_02195 77acae7b0ca904fb0cc7d2fa8a9f2f1c 312 SUPERFAMILY SSF52440 11 103 9.3E-31 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TVD_02195 77acae7b0ca904fb0cc7d2fa8a9f2f1c 312 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_02195 77acae7b0ca904fb0cc7d2fa8a9f2f1c 312 PIRSF PIRSF039102 8 57 2.0E-9 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_02195 77acae7b0ca904fb0cc7d2fa8a9f2f1c 312 PIRSF PIRSF039102 52 308 3.4E-76 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_02195 77acae7b0ca904fb0cc7d2fa8a9f2f1c 312 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 10 306 34.087 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_02195 77acae7b0ca904fb0cc7d2fa8a9f2f1c 312 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 70 81 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_02195 77acae7b0ca904fb0cc7d2fa8a9f2f1c 312 Gene3D G3DSA:3.30.1490.20 118 183 2.0E-67 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TVD_02195 77acae7b0ca904fb0cc7d2fa8a9f2f1c 312 Pfam PF07478 D-ala D-ala ligase C-terminus 131 302 2.1E-50 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_05515 e6fdbe1df87ba396eaf850ffcc31c019 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 397 2.5E-191 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TVD_05515 e6fdbe1df87ba396eaf850ffcc31c019 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TVD_05515 e6fdbe1df87ba396eaf850ffcc31c019 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 385 1.6E-47 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme TVD_05515 e6fdbe1df87ba396eaf850ffcc31c019 402 Gene3D G3DSA:3.40.50.1100 17 213 2.4E-188 T 11-10-2018 TVD_05515 e6fdbe1df87ba396eaf850ffcc31c019 402 PIRSF PIRSF001413 2 402 5.0E-163 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TVD_05515 e6fdbe1df87ba396eaf850ffcc31c019 402 SUPERFAMILY SSF53686 10 396 8.51E-149 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme TVD_05515 e6fdbe1df87ba396eaf850ffcc31c019 402 Gene3D G3DSA:3.40.50.1100 61 391 2.4E-188 T 11-10-2018 TVD_05515 e6fdbe1df87ba396eaf850ffcc31c019 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 398 53.082 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TVD_07815 3ca0868e6c8f2a12dfc609aebb8c76f4 694 Gene3D G3DSA:3.30.870.10 325 506 6.3E-69 T 11-10-2018 TVD_07815 3ca0868e6c8f2a12dfc609aebb8c76f4 694 PIRSF PIRSF015589 1 693 2.5E-280 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 TVD_07815 3ca0868e6c8f2a12dfc609aebb8c76f4 694 Pfam PF13090 Polyphosphate kinase C-terminal domain 337 684 2.6E-152 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 TVD_07815 3ca0868e6c8f2a12dfc609aebb8c76f4 694 Gene3D G3DSA:3.30.1840.10 5 319 2.9E-103 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 TVD_07815 3ca0868e6c8f2a12dfc609aebb8c76f4 694 Hamap MF_00347 Polyphosphate kinase [ppk]. 9 690 28.406 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 TVD_07815 3ca0868e6c8f2a12dfc609aebb8c76f4 694 Gene3D G3DSA:3.30.870.10 507 692 1.3E-66 T 11-10-2018 TVD_07815 3ca0868e6c8f2a12dfc609aebb8c76f4 694 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 12 685 6.3E-289 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 TVD_07815 3ca0868e6c8f2a12dfc609aebb8c76f4 694 Pfam PF13089 Polyphosphate kinase N-terminal domain 12 118 5.3E-36 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 TVD_07815 3ca0868e6c8f2a12dfc609aebb8c76f4 694 Pfam PF02503 Polyphosphate kinase middle domain 127 328 5.5E-63 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 TVD_07815 3ca0868e6c8f2a12dfc609aebb8c76f4 694 SUPERFAMILY SSF56024 322 499 4.4E-54 T 11-10-2018 TVD_07815 3ca0868e6c8f2a12dfc609aebb8c76f4 694 SUPERFAMILY SSF56024 507 687 9.42E-69 T 11-10-2018 TVD_07815 3ca0868e6c8f2a12dfc609aebb8c76f4 694 SUPERFAMILY SSF140356 9 113 3.66E-36 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 TVD_07815 3ca0868e6c8f2a12dfc609aebb8c76f4 694 SUPERFAMILY SSF143724 115 320 1.35E-66 T 11-10-2018 TVD_00340 3bd4c1aaff4dfd6017826c5616c48311 416 TIGRFAM TIGR03087 stp1: sugar transferase, PEP-CTERM/EpsH1 system associated 4 396 1.5E-166 T 11-10-2018 IPR017521 Sugar transferase, PEP-CTERM, Stp1 TVD_00340 3bd4c1aaff4dfd6017826c5616c48311 416 Gene3D G3DSA:3.40.50.2000 90 220 1.1E-5 T 11-10-2018 TVD_00340 3bd4c1aaff4dfd6017826c5616c48311 416 Gene3D G3DSA:3.40.50.2000 221 380 1.2E-16 T 11-10-2018 TVD_00340 3bd4c1aaff4dfd6017826c5616c48311 416 Pfam PF13692 Glycosyl transferases group 1 229 364 5.8E-27 T 11-10-2018 TVD_00340 3bd4c1aaff4dfd6017826c5616c48311 416 SUPERFAMILY SSF53756 13 395 6.28E-29 T 11-10-2018 TVD_04635 d14eb485d97f058c2f6ac8822e68cf7f 301 PIRSF PIRSF000723 1 297 6.4E-98 T 11-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 TVD_04635 d14eb485d97f058c2f6ac8822e68cf7f 301 PRINTS PR01469 Bacterial carbamate kinase signature 41 60 2.2E-47 T 11-10-2018 TVD_04635 d14eb485d97f058c2f6ac8822e68cf7f 301 PRINTS PR01469 Bacterial carbamate kinase signature 253 268 2.2E-47 T 11-10-2018 TVD_04635 d14eb485d97f058c2f6ac8822e68cf7f 301 PRINTS PR01469 Bacterial carbamate kinase signature 171 189 2.2E-47 T 11-10-2018 TVD_04635 d14eb485d97f058c2f6ac8822e68cf7f 301 PRINTS PR01469 Bacterial carbamate kinase signature 100 119 2.2E-47 T 11-10-2018 TVD_04635 d14eb485d97f058c2f6ac8822e68cf7f 301 PRINTS PR01469 Bacterial carbamate kinase signature 148 167 2.2E-47 T 11-10-2018 TVD_04635 d14eb485d97f058c2f6ac8822e68cf7f 301 PRINTS PR01469 Bacterial carbamate kinase signature 202 217 2.2E-47 T 11-10-2018 TVD_04635 d14eb485d97f058c2f6ac8822e68cf7f 301 SUPERFAMILY SSF53633 1 295 1.44E-68 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TVD_04635 d14eb485d97f058c2f6ac8822e68cf7f 301 Gene3D G3DSA:3.40.1160.10 1 297 1.5E-102 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily TVD_04635 d14eb485d97f058c2f6ac8822e68cf7f 301 Pfam PF00696 Amino acid kinase family 1 277 1.0E-27 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 TVD_11015 b21324afe8d35ecc9d1aac5736448230 401 Gene3D G3DSA:1.10.3210.10 125 373 6.4E-55 T 11-10-2018 TVD_11015 b21324afe8d35ecc9d1aac5736448230 401 Pfam PF08668 HDOD domain 144 326 4.7E-41 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD TVD_11015 b21324afe8d35ecc9d1aac5736448230 401 SUPERFAMILY SSF51206 5 109 3.8E-8 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like TVD_11015 b21324afe8d35ecc9d1aac5736448230 401 SUPERFAMILY SSF109604 139 353 1.2E-45 T 11-10-2018 TVD_09230 05f7714db7520c7d121eba55119ae75e 495 Gene3D G3DSA:2.20.200.10 102 353 3.5E-118 T 11-10-2018 TVD_09230 05f7714db7520c7d121eba55119ae75e 495 Gene3D G3DSA:1.20.1600.10 56 464 3.5E-118 T 11-10-2018 TVD_09230 05f7714db7520c7d121eba55119ae75e 495 Pfam PF02321 Outer membrane efflux protein 285 462 6.0E-26 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_09230 05f7714db7520c7d121eba55119ae75e 495 Pfam PF02321 Outer membrane efflux protein 65 248 2.6E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_09230 05f7714db7520c7d121eba55119ae75e 495 SUPERFAMILY SSF56954 5 467 1.57E-101 T 11-10-2018 TVD_09230 05f7714db7520c7d121eba55119ae75e 495 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 464 1.8E-103 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 TVD_11915 c3423a800ee8bbc430401f3af7021f31 378 Gene3D G3DSA:3.30.420.40 145 330 2.3E-122 T 11-10-2018 TVD_11915 c3423a800ee8bbc430401f3af7021f31 378 SUPERFAMILY SSF53067 5 341 1.55E-24 T 11-10-2018 TVD_11915 c3423a800ee8bbc430401f3af7021f31 378 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 4 369 2.5E-136 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 TVD_11915 c3423a800ee8bbc430401f3af7021f31 378 Gene3D G3DSA:3.30.420.40 10 365 2.3E-122 T 11-10-2018 TVD_11915 c3423a800ee8bbc430401f3af7021f31 378 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 3 370 38.915 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 TVD_11035 71e46a06c8e17abe0e4328eb2330aa09 295 SUPERFAMILY SSF56752 3 277 4.45E-80 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 TVD_11035 71e46a06c8e17abe0e4328eb2330aa09 295 Gene3D G3DSA:3.20.10.10 124 282 1.2E-59 T 11-10-2018 TVD_11035 71e46a06c8e17abe0e4328eb2330aa09 295 Pfam PF01063 Amino-transferase class IV 31 254 6.6E-50 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 TVD_11035 71e46a06c8e17abe0e4328eb2330aa09 295 Gene3D G3DSA:3.30.470.10 1 121 3.1E-35 T 11-10-2018 TVD_10975 bcbff87b98fd0fe4e58dd0414d2030af 546 Gene3D G3DSA:3.50.50.60 11 401 5.4E-158 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_10975 bcbff87b98fd0fe4e58dd0414d2030af 546 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 352 374 1.2E-9 T 11-10-2018 TVD_10975 bcbff87b98fd0fe4e58dd0414d2030af 546 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 1.2E-9 T 11-10-2018 TVD_10975 bcbff87b98fd0fe4e58dd0414d2030af 546 Gene3D G3DSA:3.90.700.10 245 355 5.4E-158 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_10975 bcbff87b98fd0fe4e58dd0414d2030af 546 PIRSF PIRSF000171 336 529 8.3E-12 T 11-10-2018 TVD_10975 bcbff87b98fd0fe4e58dd0414d2030af 546 PIRSF PIRSF000171 3 295 1.1E-22 T 11-10-2018 TVD_10975 bcbff87b98fd0fe4e58dd0414d2030af 546 SUPERFAMILY SSF56425 235 350 1.12E-42 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_10975 bcbff87b98fd0fe4e58dd0414d2030af 546 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 10 519 7.1E-193 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 TVD_10975 bcbff87b98fd0fe4e58dd0414d2030af 546 Pfam PF02910 Fumarate reductase flavoprotein C-term 440 522 7.8E-13 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_10975 bcbff87b98fd0fe4e58dd0414d2030af 546 Pfam PF00890 FAD binding domain 11 389 1.4E-103 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_10975 bcbff87b98fd0fe4e58dd0414d2030af 546 Gene3D G3DSA:1.20.58.100 424 539 1.7E-39 T 11-10-2018 TVD_10975 bcbff87b98fd0fe4e58dd0414d2030af 546 SUPERFAMILY SSF51905 10 447 2.64E-72 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_10975 bcbff87b98fd0fe4e58dd0414d2030af 546 SUPERFAMILY SSF46977 424 524 3.27E-29 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_02950 9bdb6cdd3b89eab26e16f89281509f10 84 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 81 1.9E-7 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TVD_02950 9bdb6cdd3b89eab26e16f89281509f10 84 Gene3D G3DSA:3.30.2310.20 1 82 2.4E-15 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_02950 9bdb6cdd3b89eab26e16f89281509f10 84 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 17 82 6.1E-8 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 TVD_02950 9bdb6cdd3b89eab26e16f89281509f10 84 SUPERFAMILY SSF143011 2 82 9.68E-16 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_11470 7c4c53cd68f8f97027417472a3608a35 389 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 211 222 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_11470 7c4c53cd68f8f97027417472a3608a35 389 Pfam PF08331 Domain of unknown function (DUF1730) 79 158 5.8E-23 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 TVD_11470 7c4c53cd68f8f97027417472a3608a35 389 SUPERFAMILY SSF46548 157 274 3.03E-19 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_11470 7c4c53cd68f8f97027417472a3608a35 389 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 23 333 49.806 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 TVD_11470 7c4c53cd68f8f97027417472a3608a35 389 Pfam PF13484 4Fe-4S double cluster binding domain 210 274 8.3E-21 T 11-10-2018 TVD_11470 7c4c53cd68f8f97027417472a3608a35 389 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 30 366 7.9E-149 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 TVD_05530 107c9d13f5f06cf9f2cc3a3c5f3767a9 445 TIGRFAM TIGR01499 folC: bifunctional protein FolC 25 418 2.6E-93 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 TVD_05530 107c9d13f5f06cf9f2cc3a3c5f3767a9 445 Gene3D G3DSA:3.40.1190.10 1 287 4.7E-85 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TVD_05530 107c9d13f5f06cf9f2cc3a3c5f3767a9 445 SUPERFAMILY SSF53244 289 420 6.96E-25 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TVD_05530 107c9d13f5f06cf9f2cc3a3c5f3767a9 445 SUPERFAMILY SSF53623 4 278 7.94E-79 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TVD_05530 107c9d13f5f06cf9f2cc3a3c5f3767a9 445 PIRSF PIRSF001563 1 425 4.5E-96 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 TVD_05530 107c9d13f5f06cf9f2cc3a3c5f3767a9 445 Pfam PF08245 Mur ligase middle domain 48 187 6.4E-6 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TVD_05530 107c9d13f5f06cf9f2cc3a3c5f3767a9 445 Gene3D G3DSA:3.90.190.20 289 423 1.2E-28 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TVD_04115 6a4e8453327ea340f02d7a7ca1d1037c 175 Pfam PF08534 Redoxin 20 161 9.4E-23 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 TVD_04115 6a4e8453327ea340f02d7a7ca1d1037c 175 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 11-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 TVD_04115 6a4e8453327ea340f02d7a7ca1d1037c 175 Gene3D G3DSA:3.40.30.10 1 170 1.2E-47 T 11-10-2018 TVD_04115 6a4e8453327ea340f02d7a7ca1d1037c 175 Hamap MF_00269 Thiol peroxidase [tpx]. 3 166 36.425 T 11-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 TVD_04115 6a4e8453327ea340f02d7a7ca1d1037c 175 SUPERFAMILY SSF52833 1 163 3.77E-40 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_11020 7f1afa31e5235fb97f214656a9cad484 318 Pfam PF04055 Radical SAM superfamily 88 248 1.4E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TVD_11020 7f1afa31e5235fb97f214656a9cad484 318 Hamap MF_00206 Lipoyl synthase [lipA]. 1 318 159.865 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TVD_11020 7f1afa31e5235fb97f214656a9cad484 318 TIGRFAM TIGR00510 lipA: lipoyl synthase 28 315 5.5E-136 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TVD_11020 7f1afa31e5235fb97f214656a9cad484 318 SUPERFAMILY SSF102114 48 311 1.1E-71 T 11-10-2018 TVD_11020 7f1afa31e5235fb97f214656a9cad484 318 PIRSF PIRSF005963 2 317 3.7E-135 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 TVD_11020 7f1afa31e5235fb97f214656a9cad484 318 Gene3D G3DSA:3.20.20.70 79 306 5.1E-24 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_11020 7f1afa31e5235fb97f214656a9cad484 318 SMART SM00729 81 290 1.7E-18 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TVD_09270 9f1854d70ac8756bfb59df7a3bd5b467 292 Gene3D G3DSA:1.10.357.140 10 155 1.6E-18 T 11-10-2018 TVD_09270 9f1854d70ac8756bfb59df7a3bd5b467 292 Pfam PF01040 UbiA prenyltransferase family 20 265 1.2E-24 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 TVD_13165 0bce742014f9fe1aaa8ca3953e938062 569 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 32 559 2.1E-139 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 TVD_13165 0bce742014f9fe1aaa8ca3953e938062 569 Gene3D G3DSA:3.60.20.40 378 561 2.0E-59 T 11-10-2018 TVD_13165 0bce742014f9fe1aaa8ca3953e938062 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 52 77 3.9E-65 T 11-10-2018 TVD_13165 0bce742014f9fe1aaa8ca3953e938062 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 126 144 3.9E-65 T 11-10-2018 TVD_13165 0bce742014f9fe1aaa8ca3953e938062 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 272 291 3.9E-65 T 11-10-2018 TVD_13165 0bce742014f9fe1aaa8ca3953e938062 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 443 458 3.9E-65 T 11-10-2018 TVD_13165 0bce742014f9fe1aaa8ca3953e938062 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 242 258 3.9E-65 T 11-10-2018 TVD_13165 0bce742014f9fe1aaa8ca3953e938062 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 144 163 3.9E-65 T 11-10-2018 TVD_13165 0bce742014f9fe1aaa8ca3953e938062 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 402 420 3.9E-65 T 11-10-2018 TVD_13165 0bce742014f9fe1aaa8ca3953e938062 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 378 396 3.9E-65 T 11-10-2018 TVD_13165 0bce742014f9fe1aaa8ca3953e938062 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 466 483 3.9E-65 T 11-10-2018 TVD_13165 0bce742014f9fe1aaa8ca3953e938062 569 Gene3D G3DSA:1.10.246.130 258 366 5.4E-33 T 11-10-2018 TVD_13165 0bce742014f9fe1aaa8ca3953e938062 569 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 378 402 - T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 TVD_13165 0bce742014f9fe1aaa8ca3953e938062 569 SUPERFAMILY SSF56235 29 566 4.44E-169 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_13165 0bce742014f9fe1aaa8ca3953e938062 569 Pfam PF01019 Gamma-glutamyltranspeptidase 45 562 1.9E-163 T 11-10-2018 TVD_08310 7e66ce4df8b3cf7d55abba6203e15cc0 219 Pfam PF00665 Integrase core domain 48 161 2.4E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TVD_08310 7e66ce4df8b3cf7d55abba6203e15cc0 219 Gene3D G3DSA:3.30.420.10 45 190 1.1E-17 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TVD_08310 7e66ce4df8b3cf7d55abba6203e15cc0 219 SUPERFAMILY SSF53098 40 208 3.04E-44 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_11785 4219f5c4c1e21a32880824d8666e20d2 462 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 3.6E-72 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TVD_11785 4219f5c4c1e21a32880824d8666e20d2 462 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 453 33.943 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 TVD_11785 4219f5c4c1e21a32880824d8666e20d2 462 Gene3D G3DSA:1.10.260.30 328 453 1.6E-42 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TVD_11785 4219f5c4c1e21a32880824d8666e20d2 462 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 3.4E-174 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 TVD_11785 4219f5c4c1e21a32880824d8666e20d2 462 Pfam PF02978 Signal peptide binding domain 329 427 1.6E-32 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TVD_11785 4219f5c4c1e21a32880824d8666e20d2 462 Gene3D G3DSA:1.20.120.140 5 305 9.9E-123 T 11-10-2018 TVD_11785 4219f5c4c1e21a32880824d8666e20d2 462 SUPERFAMILY SSF47446 298 430 1.57E-43 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 TVD_11785 4219f5c4c1e21a32880824d8666e20d2 462 SMART SM00962 100 296 5.7E-114 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TVD_11785 4219f5c4c1e21a32880824d8666e20d2 462 Gene3D G3DSA:3.40.50.300 90 285 9.9E-123 T 11-10-2018 TVD_11785 4219f5c4c1e21a32880824d8666e20d2 462 SUPERFAMILY SSF52540 42 352 3.48E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_11785 4219f5c4c1e21a32880824d8666e20d2 462 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TVD_11785 4219f5c4c1e21a32880824d8666e20d2 462 SMART SM00382 99 247 1.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_11785 4219f5c4c1e21a32880824d8666e20d2 462 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.3E-22 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TVD_11785 4219f5c4c1e21a32880824d8666e20d2 462 SMART SM00963 1 86 2.9E-36 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 TVD_07950 ffacf27e0efcda866874643913fa6097 118 SUPERFAMILY SSF46955 19 116 8.7E-20 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily TVD_07950 ffacf27e0efcda866874643913fa6097 118 SMART SM00422 19 89 7.4E-9 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TVD_07950 ffacf27e0efcda866874643913fa6097 118 Gene3D G3DSA:1.10.1660.10 14 88 4.6E-23 T 11-10-2018 TVD_07950 ffacf27e0efcda866874643913fa6097 118 Pfam PF13411 MerR HTH family regulatory protein 19 87 7.7E-23 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TVD_13065 c9ab7b959617fd4f082bfa71d5b47fe4 428 Pfam PF00990 Diguanylate cyclase, GGDEF domain 268 422 6.3E-40 T 11-10-2018 IPR000160 GGDEF domain TVD_13065 c9ab7b959617fd4f082bfa71d5b47fe4 428 Gene3D G3DSA:3.30.70.270 254 425 5.2E-49 T 11-10-2018 TVD_13065 c9ab7b959617fd4f082bfa71d5b47fe4 428 SMART SM00267 258 426 1.6E-46 T 11-10-2018 IPR000160 GGDEF domain TVD_13065 c9ab7b959617fd4f082bfa71d5b47fe4 428 SUPERFAMILY SSF55073 273 424 4.0E-41 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_13065 c9ab7b959617fd4f082bfa71d5b47fe4 428 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 267 424 1.2E-43 T 11-10-2018 IPR000160 GGDEF domain TVD_08715 84e35b8e20735968680436e3701998c7 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 3.8E-68 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 TVD_08715 84e35b8e20735968680436e3701998c7 301 Gene3D G3DSA:3.40.50.20 1 114 2.5E-38 T 11-10-2018 TVD_08715 84e35b8e20735968680436e3701998c7 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 1.8E-86 T 11-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 TVD_08715 84e35b8e20735968680436e3701998c7 301 Gene3D G3DSA:3.30.470.80 182 300 3.7E-44 T 11-10-2018 TVD_08715 84e35b8e20735968680436e3701998c7 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.707 T 11-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK TVD_08715 84e35b8e20735968680436e3701998c7 301 Gene3D G3DSA:3.30.1490.20 115 181 1.1E-25 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TVD_08715 84e35b8e20735968680436e3701998c7 301 SUPERFAMILY SSF56059 98 288 2.47E-49 T 11-10-2018 TVD_07850 216d046a0d3f491f3c6093ae8e82bed4 249 Gene3D G3DSA:3.30.70.2970 51 155 1.2E-23 T 11-10-2018 TVD_07850 216d046a0d3f491f3c6093ae8e82bed4 249 Pfam PF04402 Protein of unknown function (DUF541) 41 233 2.0E-29 T 11-10-2018 IPR007497 Protein of unknown function DUF541 TVD_07850 216d046a0d3f491f3c6093ae8e82bed4 249 Gene3D G3DSA:3.30.110.170 42 232 1.2E-23 T 11-10-2018 TVD_04565 ad614935c98b22e42af689539852cdb3 141 Pfam PF08897 Domain of unknown function (DUF1841) 4 137 5.9E-54 T 11-10-2018 IPR014993 Protein of unknown function DUF1841 TVD_13250 9b2c95c5654cc67909ef8e94947f0586 286 SUPERFAMILY SSF63380 29 111 1.89E-13 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TVD_13250 9b2c95c5654cc67909ef8e94947f0586 286 PRINTS PR00406 Cytochrome B5 reductase signature 161 172 6.9E-11 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 TVD_13250 9b2c95c5654cc67909ef8e94947f0586 286 PRINTS PR00406 Cytochrome B5 reductase signature 213 221 6.9E-11 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 TVD_13250 9b2c95c5654cc67909ef8e94947f0586 286 PRINTS PR00406 Cytochrome B5 reductase signature 123 142 6.9E-11 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 TVD_13250 9b2c95c5654cc67909ef8e94947f0586 286 PRINTS PR00406 Cytochrome B5 reductase signature 99 113 6.9E-11 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 TVD_13250 9b2c95c5654cc67909ef8e94947f0586 286 Gene3D G3DSA:3.40.50.80 112 242 6.0E-28 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_13250 9b2c95c5654cc67909ef8e94947f0586 286 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 245 274 1.4E-7 T 11-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain TVD_13250 9b2c95c5654cc67909ef8e94947f0586 286 Pfam PF00175 Oxidoreductase NAD-binding domain 124 227 6.1E-16 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TVD_13250 9b2c95c5654cc67909ef8e94947f0586 286 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 161 172 3.6E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TVD_13250 9b2c95c5654cc67909ef8e94947f0586 286 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 123 142 3.6E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TVD_13250 9b2c95c5654cc67909ef8e94947f0586 286 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 149 158 3.6E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TVD_13250 9b2c95c5654cc67909ef8e94947f0586 286 Gene3D G3DSA:2.40.30.10 14 111 6.2E-8 T 11-10-2018 TVD_13250 9b2c95c5654cc67909ef8e94947f0586 286 SUPERFAMILY SSF52343 107 275 9.3E-34 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_13250 9b2c95c5654cc67909ef8e94947f0586 286 PIRSF PIRSF006816 13 280 3.4E-67 T 11-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 TVD_05285 54697ce05fe390ece514f392e5fa4f37 215 Pfam PF14520 Helix-hairpin-helix domain 160 204 4.5E-7 T 11-10-2018 TVD_05285 54697ce05fe390ece514f392e5fa4f37 215 Gene3D G3DSA:3.40.50.10130 2 133 2.7E-28 T 11-10-2018 TVD_05285 54697ce05fe390ece514f392e5fa4f37 215 SUPERFAMILY SSF47781 154 209 8.26E-8 T 11-10-2018 IPR010994 RuvA domain 2-like TVD_05285 54697ce05fe390ece514f392e5fa4f37 215 Pfam PF02732 ERCC4 domain 11 128 8.6E-15 T 11-10-2018 IPR006166 ERCC4 domain GO:0003677|GO:0004518 Reactome: R-HSA-6783310 TVD_05285 54697ce05fe390ece514f392e5fa4f37 215 Gene3D G3DSA:1.10.150.20 143 210 6.5E-10 T 11-10-2018 TVD_05285 54697ce05fe390ece514f392e5fa4f37 215 SMART SM00891 7 87 1.3E-11 T 11-10-2018 IPR006166 ERCC4 domain GO:0003677|GO:0004518 Reactome: R-HSA-6783310 TVD_05285 54697ce05fe390ece514f392e5fa4f37 215 SUPERFAMILY SSF52980 6 132 1.53E-21 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 TVD_12405 a69e1b0d1195a5be71404598a383c07b 162 SUPERFAMILY SSF75169 45 162 1.81E-22 T 11-10-2018 IPR027396 DsrEFH-like TVD_12405 a69e1b0d1195a5be71404598a383c07b 162 Pfam PF02635 DsrE/DsrF-like family 58 162 3.2E-15 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_12405 a69e1b0d1195a5be71404598a383c07b 162 Gene3D G3DSA:3.40.1260.10 44 162 3.5E-29 T 11-10-2018 IPR027396 DsrEFH-like TVD_11845 fd57344122ee66bc25e70dfe1d6eb118 127 Gene3D G3DSA:3.30.479.10 1 126 4.5E-38 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 TVD_11845 fd57344122ee66bc25e70dfe1d6eb118 127 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 8 125 7.2E-40 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 TVD_11845 fd57344122ee66bc25e70dfe1d6eb118 127 SUPERFAMILY SSF55620 3 123 1.67E-40 T 11-10-2018 TVD_11845 fd57344122ee66bc25e70dfe1d6eb118 127 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 8 98 2.7E-32 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 TVD_11845 fd57344122ee66bc25e70dfe1d6eb118 127 PIRSF PIRSF006113 2 126 2.9E-26 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 TVD_09820 bc70e55f30cc1548adfb4f901de93177 214 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 184 1.9E-12 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TVD_09820 bc70e55f30cc1548adfb4f901de93177 214 Gene3D G3DSA:3.40.50.300 3 206 3.5E-41 T 11-10-2018 TVD_09820 bc70e55f30cc1548adfb4f901de93177 214 PIRSF PIRSF009320 1 213 1.7E-30 T 11-10-2018 TVD_09820 bc70e55f30cc1548adfb4f901de93177 214 SUPERFAMILY SSF52540 4 208 1.12E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 SUPERFAMILY SSF48029 7 120 1.96E-22 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 Gene3D G3DSA:1.10.220.30 1 88 2.9E-20 T 11-10-2018 TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 Pfam PF14841 FliG middle domain 118 192 5.8E-29 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 Gene3D G3DSA:1.10.220.30 90 195 2.3E-31 T 11-10-2018 TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 Pfam PF01706 FliG C-terminal domain 221 327 1.7E-41 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 PIRSF PIRSF003161 3 336 2.0E-119 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 7 334 8.0E-106 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 9 25 3.5E-65 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 275 301 3.5E-65 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 229 249 3.5E-65 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 117 140 3.5E-65 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 198 223 3.5E-65 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 251 271 3.5E-65 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 38 64 3.5E-65 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 Gene3D G3DSA:1.10.220.30 198 336 8.0E-45 T 11-10-2018 TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 Pfam PF14842 FliG N-terminal domain 10 108 5.4E-29 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain TVD_06255 97eb2b1c5eac8496261d7180e9995134 336 SUPERFAMILY SSF48029 117 328 6.28E-68 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical TVD_05715 550260d4dfbcfb41fe30cebd4e903718 194 Pfam PF09335 SNARE associated Golgi protein 38 157 8.2E-11 T 11-10-2018 IPR032816 SNARE associated Golgi protein TVD_06820 9ef818bfae68551cc858b96cbea1fc40 461 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 147 449 1.7E-100 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TVD_06820 9ef818bfae68551cc858b96cbea1fc40 461 SUPERFAMILY SSF53187 141 456 5.34E-99 T 11-10-2018 TVD_06820 9ef818bfae68551cc858b96cbea1fc40 461 PRINTS PR00481 Cytosol aminopeptidase signature 280 301 6.9E-47 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TVD_06820 9ef818bfae68551cc858b96cbea1fc40 461 PRINTS PR00481 Cytosol aminopeptidase signature 302 322 6.9E-47 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TVD_06820 9ef818bfae68551cc858b96cbea1fc40 461 PRINTS PR00481 Cytosol aminopeptidase signature 330 345 6.9E-47 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TVD_06820 9ef818bfae68551cc858b96cbea1fc40 461 PRINTS PR00481 Cytosol aminopeptidase signature 243 264 6.9E-47 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TVD_06820 9ef818bfae68551cc858b96cbea1fc40 461 PRINTS PR00481 Cytosol aminopeptidase signature 221 238 6.9E-47 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TVD_06820 9ef818bfae68551cc858b96cbea1fc40 461 Gene3D G3DSA:3.40.630.10 133 457 4.5E-119 T 11-10-2018 TVD_06820 9ef818bfae68551cc858b96cbea1fc40 461 Gene3D G3DSA:3.40.220.10 2 130 3.5E-30 T 11-10-2018 TVD_06820 9ef818bfae68551cc858b96cbea1fc40 461 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 306 313 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TVD_02805 36a80824f04c9d5299cfc52aa23d4ff8 122 SMART SM00450 15 112 1.3E-23 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_02805 36a80824f04c9d5299cfc52aa23d4ff8 122 Gene3D G3DSA:3.40.250.10 13 119 1.7E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_02805 36a80824f04c9d5299cfc52aa23d4ff8 122 Pfam PF00581 Rhodanese-like domain 16 108 1.5E-13 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_02805 36a80824f04c9d5299cfc52aa23d4ff8 122 SUPERFAMILY SSF52821 7 116 3.54E-31 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_03250 6123e7e1dd7bfd8415ce1c82e42c6ad1 424 Pfam PF10011 Predicted membrane protein (DUF2254) 29 371 2.6E-51 T 11-10-2018 IPR018723 Protein of unknown function DUF2254, membrane TVD_07345 aac7a0a4dc42846772b595d80026028e 287 TIGRFAM TIGR03464 HpnC: squalene synthase HpnC 16 279 3.1E-90 T 11-10-2018 IPR017827 Hydroxysqualene synthase HpnC MetaCyc: PWY-7072 TVD_07345 aac7a0a4dc42846772b595d80026028e 287 Gene3D G3DSA:1.10.600.10 1 262 3.4E-79 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily TVD_07345 aac7a0a4dc42846772b595d80026028e 287 SUPERFAMILY SSF48576 8 271 1.44E-61 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily TVD_07345 aac7a0a4dc42846772b595d80026028e 287 Pfam PF00494 Squalene/phytoene synthase 17 269 4.2E-57 T 11-10-2018 TVD_05080 fe02491b2df73caaee7c07fbaf8ea4c7 116 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 50 2.4E-11 T 11-10-2018 TVD_05080 fe02491b2df73caaee7c07fbaf8ea4c7 116 SUPERFAMILY SSF46785 6 105 1.65E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_05080 fe02491b2df73caaee7c07fbaf8ea4c7 116 Gene3D G3DSA:1.10.10.10 4 111 4.5E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_05080 fe02491b2df73caaee7c07fbaf8ea4c7 116 TIGRFAM TIGR04176 MarR_EPS: EPS-associated transcriptional regulator, MarR family 3 105 2.5E-43 T 11-10-2018 IPR026433 EPS-associated transcriptional regulator, MarR family TVD_01945 7ce2f57215d0cd528e99623c1cc23505 222 Pfam PF05494 MlaC protein 36 199 4.5E-45 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC TVD_01945 7ce2f57215d0cd528e99623c1cc23505 222 PIRSF PIRSF004649 1 209 9.6E-52 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC TVD_01945 7ce2f57215d0cd528e99623c1cc23505 222 Gene3D G3DSA:3.10.450.710 26 204 8.9E-45 T 11-10-2018 TVD_01250 7485ec7385e9c908dda3da6f274adbbc 309 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 5 279 57.267 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TVD_01250 7485ec7385e9c908dda3da6f274adbbc 309 SUPERFAMILY SSF102886 8 304 2.22E-139 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TVD_01250 7485ec7385e9c908dda3da6f274adbbc 309 PRINTS PR00073 Coprogen oxidase signature 50 71 2.6E-87 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TVD_01250 7485ec7385e9c908dda3da6f274adbbc 309 PRINTS PR00073 Coprogen oxidase signature 127 149 2.6E-87 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TVD_01250 7485ec7385e9c908dda3da6f274adbbc 309 PRINTS PR00073 Coprogen oxidase signature 92 116 2.6E-87 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TVD_01250 7485ec7385e9c908dda3da6f274adbbc 309 PRINTS PR00073 Coprogen oxidase signature 236 263 2.6E-87 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TVD_01250 7485ec7385e9c908dda3da6f274adbbc 309 PRINTS PR00073 Coprogen oxidase signature 264 290 2.6E-87 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TVD_01250 7485ec7385e9c908dda3da6f274adbbc 309 PRINTS PR00073 Coprogen oxidase signature 33 49 2.6E-87 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TVD_01250 7485ec7385e9c908dda3da6f274adbbc 309 PRINTS PR00073 Coprogen oxidase signature 164 193 2.6E-87 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TVD_01250 7485ec7385e9c908dda3da6f274adbbc 309 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 168 192 - T 11-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TVD_01250 7485ec7385e9c908dda3da6f274adbbc 309 PIRSF PIRSF000166 1 305 7.2E-128 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TVD_01250 7485ec7385e9c908dda3da6f274adbbc 309 Pfam PF01218 Coproporphyrinogen III oxidase 11 304 3.7E-133 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TVD_01250 7485ec7385e9c908dda3da6f274adbbc 309 Gene3D G3DSA:3.40.1500.10 1 304 1.5E-137 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 TVD_09220 3f6238fbadbfc630a3fae889b8810cbf 100 Pfam PF07238 PilZ domain 7 97 3.4E-9 T 11-10-2018 IPR009875 PilZ domain GO:0035438 TVD_09220 3f6238fbadbfc630a3fae889b8810cbf 100 Gene3D G3DSA:2.40.10.220 3 98 4.2E-8 T 11-10-2018 TVD_09220 3f6238fbadbfc630a3fae889b8810cbf 100 SUPERFAMILY SSF141371 4 81 2.55E-8 T 11-10-2018 TVD_10430 e7bf8ea82114ccae6c63abc01c67accc 251 Pfam PF12119 Protein of unknown function (DUF3581) 6 223 7.4E-91 T 11-10-2018 IPR021974 Protein of unknown function DUF3581 TVD_02610 97802f51edfc023fb4e67791a9ebc2dd 117 Gene3D G3DSA:2.40.10.220 2 116 4.4E-34 T 11-10-2018 TVD_02610 97802f51edfc023fb4e67791a9ebc2dd 117 SUPERFAMILY SSF141371 3 114 1.61E-28 T 11-10-2018 TVD_02610 97802f51edfc023fb4e67791a9ebc2dd 117 PIRSF PIRSF028141 1 117 1.9E-29 T 11-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type TVD_02610 97802f51edfc023fb4e67791a9ebc2dd 117 Pfam PF07238 PilZ domain 3 97 2.3E-14 T 11-10-2018 IPR009875 PilZ domain GO:0035438 TVD_12285 c1c4f5c2a7843e818465ef6c08c03b13 554 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 2.4E-257 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TVD_12285 c1c4f5c2a7843e818465ef6c08c03b13 554 SUPERFAMILY SSF54849 137 203 1.85E-23 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily TVD_12285 c1c4f5c2a7843e818465ef6c08c03b13 554 Gene3D G3DSA:1.10.560.10 8 521 7.5E-238 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily TVD_12285 c1c4f5c2a7843e818465ef6c08c03b13 554 Gene3D G3DSA:3.30.260.10 136 410 7.5E-238 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily TVD_12285 c1c4f5c2a7843e818465ef6c08c03b13 554 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 3.3E-100 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 TVD_12285 c1c4f5c2a7843e818465ef6c08c03b13 554 Gene3D G3DSA:3.50.7.10 192 372 7.5E-238 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily TVD_12285 c1c4f5c2a7843e818465ef6c08c03b13 554 SUPERFAMILY SSF48592 7 521 7.25E-78 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily TVD_12285 c1c4f5c2a7843e818465ef6c08c03b13 554 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TVD_12285 c1c4f5c2a7843e818465ef6c08c03b13 554 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TVD_12285 c1c4f5c2a7843e818465ef6c08c03b13 554 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TVD_12285 c1c4f5c2a7843e818465ef6c08c03b13 554 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TVD_12285 c1c4f5c2a7843e818465ef6c08c03b13 554 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TVD_12285 c1c4f5c2a7843e818465ef6c08c03b13 554 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TVD_12285 c1c4f5c2a7843e818465ef6c08c03b13 554 Hamap MF_00600 60 kDa chaperonin [groL]. 2 550 41.435 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 TVD_12285 c1c4f5c2a7843e818465ef6c08c03b13 554 SUPERFAMILY SSF52029 184 376 6.28E-84 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily TVD_05115 ec365cffacfea6755b82169e7bb0fa7d 380 Gene3D G3DSA:3.40.50.11190 3 174 8.0E-45 T 11-10-2018 TVD_05115 ec365cffacfea6755b82169e7bb0fa7d 380 SUPERFAMILY SSF53756 18 349 4.4E-14 T 11-10-2018 TVD_05115 ec365cffacfea6755b82169e7bb0fa7d 380 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 226 345 3.9E-7 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 TVD_05115 ec365cffacfea6755b82169e7bb0fa7d 380 Gene3D G3DSA:3.40.50.2000 175 320 1.9E-38 T 11-10-2018 TVD_05115 ec365cffacfea6755b82169e7bb0fa7d 380 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 4 307 6.1E-98 T 11-10-2018 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 374 553 1.2E-72 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 Pfam PF14849 YidC periplasmic domain 81 364 5.9E-77 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 PRINTS PR01900 YidC translocation/secretion protein signature 489 504 2.0E-25 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 PRINTS PR01900 YidC translocation/secretion protein signature 508 532 2.0E-25 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 PRINTS PR01900 YidC translocation/secretion protein signature 360 376 2.0E-25 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 373 1.7E-94 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 Gene3D G3DSA:2.70.98.90 78 354 7.0E-80 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 PRINTS PR00701 60kDa inner membrane protein signature 87 108 4.1E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 PRINTS PR00701 60kDa inner membrane protein signature 345 365 4.1E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 PRINTS PR00701 60kDa inner membrane protein signature 2 23 4.1E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 PRINTS PR00701 60kDa inner membrane protein signature 436 459 4.1E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 PRINTS PR00701 60kDa inner membrane protein signature 519 542 4.1E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 PRINTS PR00701 60kDa inner membrane protein signature 269 284 4.1E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 PRINTS PR00701 60kDa inner membrane protein signature 185 205 4.1E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 PRINTS PR00701 60kDa inner membrane protein signature 483 505 4.1E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 555 24.29 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 TVD_13515 06e2a4a522a3277fdee699a67eb2bb4c 566 Pfam PF02096 60Kd inner membrane protein 375 553 6.0E-62 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 TVD_10995 f5df982cb18d46288cce080fa4f3bd4a 79 Gene3D G3DSA:3.30.300.90 1 79 1.2E-23 T 11-10-2018 TVD_10995 f5df982cb18d46288cce080fa4f3bd4a 79 PIRSF PIRSF003113 1 79 2.1E-18 T 11-10-2018 IPR002634 BolA protein TVD_10995 f5df982cb18d46288cce080fa4f3bd4a 79 SUPERFAMILY SSF82657 2 75 6.8E-20 T 11-10-2018 IPR036065 BolA-like superfamily TVD_10995 f5df982cb18d46288cce080fa4f3bd4a 79 Pfam PF01722 BolA-like protein 22 74 3.0E-15 T 11-10-2018 IPR002634 BolA protein TVD_10390 7dcc119a0a3d04ae1a2a6a93b73169f3 428 Gene3D G3DSA:2.120.10.30 162 428 7.0E-94 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TVD_10390 7dcc119a0a3d04ae1a2a6a93b73169f3 428 Pfam PF04052 TolB amino-terminal domain 24 125 4.3E-23 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 TVD_10390 7dcc119a0a3d04ae1a2a6a93b73169f3 428 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 7 424 46.2 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 TVD_10390 7dcc119a0a3d04ae1a2a6a93b73169f3 428 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 425 4.2E-149 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 TVD_10390 7dcc119a0a3d04ae1a2a6a93b73169f3 428 SUPERFAMILY SSF52964 29 158 6.02E-33 T 11-10-2018 TVD_10390 7dcc119a0a3d04ae1a2a6a93b73169f3 428 Pfam PF07676 WD40-like Beta Propeller Repeat 278 313 2.5E-14 T 11-10-2018 IPR011659 WD40-like Beta Propeller TVD_10390 7dcc119a0a3d04ae1a2a6a93b73169f3 428 Pfam PF07676 WD40-like Beta Propeller Repeat 199 225 0.0031 T 11-10-2018 IPR011659 WD40-like Beta Propeller TVD_10390 7dcc119a0a3d04ae1a2a6a93b73169f3 428 Pfam PF07676 WD40-like Beta Propeller Repeat 323 356 5.0E-5 T 11-10-2018 IPR011659 WD40-like Beta Propeller TVD_10390 7dcc119a0a3d04ae1a2a6a93b73169f3 428 Pfam PF07676 WD40-like Beta Propeller Repeat 237 270 1.2E-8 T 11-10-2018 IPR011659 WD40-like Beta Propeller TVD_10390 7dcc119a0a3d04ae1a2a6a93b73169f3 428 Gene3D G3DSA:3.40.50.10070 20 161 3.7E-35 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 TVD_10390 7dcc119a0a3d04ae1a2a6a93b73169f3 428 SUPERFAMILY SSF69304 151 426 3.01E-62 T 11-10-2018 TVD_03995 38b1f8166290b7fb36f03e9b4459aa5d 589 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 492 512 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site TVD_03995 38b1f8166290b7fb36f03e9b4459aa5d 589 Pfam PF00474 Sodium:solute symporter family 33 319 2.9E-38 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 TVD_03995 38b1f8166290b7fb36f03e9b4459aa5d 589 Pfam PF00474 Sodium:solute symporter family 395 510 2.7E-14 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 TVD_03995 38b1f8166290b7fb36f03e9b4459aa5d 589 Gene3D G3DSA:1.20.1730.10 375 565 1.0E-22 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily TVD_03995 38b1f8166290b7fb36f03e9b4459aa5d 589 Gene3D G3DSA:1.20.1730.10 22 329 1.1E-40 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily TVD_03995 38b1f8166290b7fb36f03e9b4459aa5d 589 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 585 4.4E-251 T 11-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily TVD_10330 54655074e412de221bc4ac1b0ce19589 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 TVD_10330 54655074e412de221bc4ac1b0ce19589 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.9E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TVD_10330 54655074e412de221bc4ac1b0ce19589 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.9E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TVD_10330 54655074e412de221bc4ac1b0ce19589 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.9E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TVD_10330 54655074e412de221bc4ac1b0ce19589 90 SMART SM00411 1 90 4.6E-44 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TVD_10330 54655074e412de221bc4ac1b0ce19589 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.0E-33 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 TVD_10330 54655074e412de221bc4ac1b0ce19589 90 SUPERFAMILY SSF47729 1 90 3.68E-33 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TVD_10330 54655074e412de221bc4ac1b0ce19589 90 Gene3D G3DSA:4.10.520.10 1 90 9.2E-37 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 Gene3D G3DSA:1.10.287.110 1 113 2.7E-36 T 11-10-2018 IPR036869 Chaperone J-domain superfamily TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 SUPERFAMILY SSF49493 113 256 1.83E-21 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 378 42.251 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 Pfam PF00226 DnaJ domain 5 67 1.1E-26 T 11-10-2018 IPR001623 DnaJ domain TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 Pfam PF01556 DnaJ C terminal domain 119 332 9.7E-45 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 SUPERFAMILY SSF57938 133 210 5.89E-23 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-10-2018 IPR018253 DnaJ domain, conserved site TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 SUPERFAMILY SSF46565 1 109 4.19E-35 T 11-10-2018 IPR036869 Chaperone J-domain superfamily TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 SUPERFAMILY SSF49493 258 343 1.05E-21 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 349 1.5E-139 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 Gene3D G3DSA:2.10.230.10 145 205 1.3E-22 T 11-10-2018 TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 PRINTS PR00625 DnaJ domain signature 62 81 2.7E-30 T 11-10-2018 IPR001623 DnaJ domain TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 PRINTS PR00625 DnaJ domain signature 25 40 2.7E-30 T 11-10-2018 IPR001623 DnaJ domain TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 PRINTS PR00625 DnaJ domain signature 7 25 2.7E-30 T 11-10-2018 IPR001623 DnaJ domain TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 PRINTS PR00625 DnaJ domain signature 42 62 2.7E-30 T 11-10-2018 IPR001623 DnaJ domain TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 SMART SM00271 4 62 1.6E-31 T 11-10-2018 IPR001623 DnaJ domain TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 Gene3D G3DSA:2.60.260.20 254 362 1.3E-29 T 11-10-2018 TVD_11630 48b5430d63d3c6b949c7e5ad46e22f83 380 Pfam PF00684 DnaJ central domain 146 206 6.6E-15 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 TVD_13190 4ecd071795c15c44b18678e3a7f963c5 137 PIRSF PIRSF029543 1 136 1.3E-29 T 11-10-2018 IPR016924 Uncharacterised conserved protein UCP029543 TVD_01455 e7b9ebad89d803ddc9d2630bc1b5d1f4 126 Gene3D G3DSA:3.40.50.1010 1 124 2.3E-22 T 11-10-2018 TVD_01455 e7b9ebad89d803ddc9d2630bc1b5d1f4 126 Pfam PF01850 PIN domain 2 115 7.0E-11 T 11-10-2018 IPR002716 PIN domain TVD_01455 e7b9ebad89d803ddc9d2630bc1b5d1f4 126 SUPERFAMILY SSF88723 2 123 1.68E-22 T 11-10-2018 IPR029060 PIN-like domain superfamily TVD_01455 e7b9ebad89d803ddc9d2630bc1b5d1f4 126 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 1 122 11.239 T 11-10-2018 IPR022907 VapC family GO:0004540 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 8 432 39.633 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 PRINTS PR00083 Histidinol dehydrogenase signature 324 349 1.6E-81 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 1.6E-81 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 1.6E-81 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 PRINTS PR00083 Histidinol dehydrogenase signature 174 200 1.6E-81 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 PRINTS PR00083 Histidinol dehydrogenase signature 204 229 1.6E-81 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 PRINTS PR00083 Histidinol dehydrogenase signature 140 166 1.6E-81 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 1.6E-81 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 PRINTS PR00083 Histidinol dehydrogenase signature 366 384 1.6E-81 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 Gene3D G3DSA:3.40.50.1980 33 235 6.6E-125 T 11-10-2018 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 SUPERFAMILY SSF53720 31 431 6.08E-83 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 PIRSF PIRSF000099 3 433 5.6E-156 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 Pfam PF00815 Histidinol dehydrogenase 29 431 1.3E-164 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 36 431 9.3E-158 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 TVD_01970 1b1e594c200490a7ccea28b4393005b9 433 Gene3D G3DSA:3.40.50.1980 237 354 6.6E-125 T 11-10-2018 TVD_03685 16598e15cfa131a7a5219e418b4bb006 323 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 244 315 2.4E-8 T 11-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_03685 16598e15cfa131a7a5219e418b4bb006 323 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 8 215 1.2E-70 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_03685 16598e15cfa131a7a5219e418b4bb006 323 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 30 178 1.2E-53 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 TVD_03685 16598e15cfa131a7a5219e418b4bb006 323 Gene3D G3DSA:3.30.2350.10 1 241 5.4E-82 T 11-10-2018 TVD_03685 16598e15cfa131a7a5219e418b4bb006 323 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 8 315 18.021 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_03685 16598e15cfa131a7a5219e418b4bb006 323 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 179 240 1.1E-14 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 TVD_03685 16598e15cfa131a7a5219e418b4bb006 323 SUPERFAMILY SSF55120 7 222 2.3E-73 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_10295 2be0b39984827830eb3c8cc9976efd16 422 Gene3D G3DSA:1.10.3720.10 186 391 5.1E-18 T 11-10-2018 IPR035906 MetI-like superfamily TVD_10295 2be0b39984827830eb3c8cc9976efd16 422 SUPERFAMILY SSF161098 190 376 1.9E-22 T 11-10-2018 IPR035906 MetI-like superfamily TVD_10295 2be0b39984827830eb3c8cc9976efd16 422 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 213 393 1.5E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TVD_00760 baa9c0036f9215a48b2185768d4e0e3b 202 SUPERFAMILY SSF52540 10 188 3.22E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_00760 baa9c0036f9215a48b2185768d4e0e3b 202 SMART SM00382 33 197 1.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_00760 baa9c0036f9215a48b2185768d4e0e3b 202 ProSitePatterns PS00211 ABC transporters family signature. 118 132 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_00760 baa9c0036f9215a48b2185768d4e0e3b 202 Gene3D G3DSA:3.40.50.300 13 93 5.1E-11 T 11-10-2018 TVD_00760 baa9c0036f9215a48b2185768d4e0e3b 202 Pfam PF00005 ABC transporter 26 152 1.1E-13 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_00760 baa9c0036f9215a48b2185768d4e0e3b 202 Gene3D G3DSA:3.40.50.300 102 190 3.6E-18 T 11-10-2018 TVD_04185 6982a79991e468b058e4ad38e7beebd8 246 Pfam PF01553 Acyltransferase 46 165 7.3E-18 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TVD_04185 6982a79991e468b058e4ad38e7beebd8 246 SMART SM00563 57 168 1.1E-27 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TVD_04185 6982a79991e468b058e4ad38e7beebd8 246 SUPERFAMILY SSF69593 27 182 1.15E-23 T 11-10-2018 TVD_11010 1a5e2483f9ab71cc718b5eeab6d87773 403 SUPERFAMILY SSF109604 132 377 3.77E-42 T 11-10-2018 TVD_11010 1a5e2483f9ab71cc718b5eeab6d87773 403 Pfam PF08668 HDOD domain 147 329 2.8E-35 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD TVD_11010 1a5e2483f9ab71cc718b5eeab6d87773 403 Gene3D G3DSA:1.10.3210.10 127 379 6.7E-50 T 11-10-2018 TVD_02250 b178a879b03a0d29a8cb5095ad032ed5 214 Gene3D G3DSA:3.40.50.300 1 205 6.2E-63 T 11-10-2018 TVD_02250 b178a879b03a0d29a8cb5095ad032ed5 214 SUPERFAMILY SSF52540 1 192 1.09E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_02250 b178a879b03a0d29a8cb5095ad032ed5 214 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 199 25.132 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TVD_02250 b178a879b03a0d29a8cb5095ad032ed5 214 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 182 3.9E-48 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TVD_02250 b178a879b03a0d29a8cb5095ad032ed5 214 Pfam PF01121 Dephospho-CoA kinase 4 180 2.0E-58 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 TVD_02095 a9ff69dbb6e2ba7be71bfe60d9524c6a 469 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 286 388 1.2E-34 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 TVD_02095 a9ff69dbb6e2ba7be71bfe60d9524c6a 469 PIRSF PIRSF038885 6 410 2.4E-153 T 11-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 TVD_02095 a9ff69dbb6e2ba7be71bfe60d9524c6a 469 Pfam PF00033 Cytochrome b/b6/petB 33 220 6.8E-71 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 TVD_02095 a9ff69dbb6e2ba7be71bfe60d9524c6a 469 Gene3D G3DSA:1.20.810.10 3 412 4.1E-148 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 TVD_02095 a9ff69dbb6e2ba7be71bfe60d9524c6a 469 SUPERFAMILY SSF81342 22 288 5.18E-100 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 TVD_02095 a9ff69dbb6e2ba7be71bfe60d9524c6a 469 SUPERFAMILY SSF81648 289 399 1.63E-26 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 TVD_07465 a780f38ebfedeb76e50b6e7caefb2ad4 334 Pfam PF13098 Thioredoxin-like domain 209 309 1.7E-7 T 11-10-2018 IPR012336 Thioredoxin-like fold TVD_07465 a780f38ebfedeb76e50b6e7caefb2ad4 334 Pfam PF13098 Thioredoxin-like domain 56 157 4.0E-15 T 11-10-2018 IPR012336 Thioredoxin-like fold TVD_07465 a780f38ebfedeb76e50b6e7caefb2ad4 334 Gene3D G3DSA:3.40.30.10 39 180 7.9E-24 T 11-10-2018 TVD_07465 a780f38ebfedeb76e50b6e7caefb2ad4 334 Gene3D G3DSA:3.40.30.10 206 331 5.7E-16 T 11-10-2018 TVD_07465 a780f38ebfedeb76e50b6e7caefb2ad4 334 SUPERFAMILY SSF52833 208 320 2.37E-10 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_07465 a780f38ebfedeb76e50b6e7caefb2ad4 334 SUPERFAMILY SSF52833 37 165 1.25E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_05520 b2c5e5cb51fea51ad62bcc18f3b9a186 277 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 264 34.899 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TVD_05520 b2c5e5cb51fea51ad62bcc18f3b9a186 277 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TVD_05520 b2c5e5cb51fea51ad62bcc18f3b9a186 277 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 261 6.8E-76 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TVD_05520 b2c5e5cb51fea51ad62bcc18f3b9a186 277 SUPERFAMILY SSF51366 1 264 7.91E-94 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TVD_05520 b2c5e5cb51fea51ad62bcc18f3b9a186 277 Gene3D G3DSA:3.20.20.70 1 270 4.6E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_05520 b2c5e5cb51fea51ad62bcc18f3b9a186 277 Pfam PF00290 Tryptophan synthase alpha chain 8 264 1.2E-89 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 TVD_00975 e03080b96b7cb53d1739f282c35dec0a 637 SUPERFAMILY SSF52540 295 505 3.09E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_00975 e03080b96b7cb53d1739f282c35dec0a 637 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_00975 e03080b96b7cb53d1739f282c35dec0a 637 SUPERFAMILY SSF52540 2 233 2.87E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_00975 e03080b96b7cb53d1739f282c35dec0a 637 Gene3D G3DSA:3.40.50.300 273 530 5.6E-56 T 11-10-2018 TVD_00975 e03080b96b7cb53d1739f282c35dec0a 637 Pfam PF00005 ABC transporter 326 456 3.1E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_00975 e03080b96b7cb53d1739f282c35dec0a 637 SMART SM00382 334 500 1.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_00975 e03080b96b7cb53d1739f282c35dec0a 637 SMART SM00382 26 220 5.0E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_00975 e03080b96b7cb53d1739f282c35dec0a 637 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_00975 e03080b96b7cb53d1739f282c35dec0a 637 Pfam PF12848 ABC transporter 214 289 1.3E-20 T 11-10-2018 IPR032781 ABC-transporter extension domain TVD_00975 e03080b96b7cb53d1739f282c35dec0a 637 Pfam PF00005 ABC transporter 17 175 1.2E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_00975 e03080b96b7cb53d1739f282c35dec0a 637 Gene3D G3DSA:3.40.50.300 7 272 2.4E-59 T 11-10-2018 TVD_03065 d116defad93f7f7cbbc70c4f91e7855b 186 SUPERFAMILY SSF69118 7 181 2.1E-45 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TVD_03065 d116defad93f7f7cbbc70c4f91e7855b 186 Gene3D G3DSA:1.20.1290.10 15 178 4.3E-40 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 TVD_09385 46f8cd13c9f9ddcdc6a8a465d2a22c10 348 Gene3D G3DSA:2.40.30.170 264 301 7.3E-12 T 11-10-2018 TVD_09385 46f8cd13c9f9ddcdc6a8a465d2a22c10 348 Pfam PF13437 HlyD family secretion protein 232 307 3.6E-7 T 11-10-2018 TVD_09385 46f8cd13c9f9ddcdc6a8a465d2a22c10 348 Gene3D G3DSA:1.10.287.470 103 227 7.3E-12 T 11-10-2018 TVD_09385 46f8cd13c9f9ddcdc6a8a465d2a22c10 348 Gene3D G3DSA:2.40.50.100 72 263 7.3E-12 T 11-10-2018 TVD_06250 9cc65691fac19ceaa9a1079e102a2cdd 557 Pfam PF08345 Flagellar M-ring protein C-terminal 257 428 6.2E-48 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal TVD_06250 9cc65691fac19ceaa9a1079e102a2cdd 557 PRINTS PR01009 Flagellar M-ring protein signature 200 218 3.2E-32 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TVD_06250 9cc65691fac19ceaa9a1079e102a2cdd 557 PRINTS PR01009 Flagellar M-ring protein signature 125 143 3.2E-32 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TVD_06250 9cc65691fac19ceaa9a1079e102a2cdd 557 PRINTS PR01009 Flagellar M-ring protein signature 157 171 3.2E-32 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TVD_06250 9cc65691fac19ceaa9a1079e102a2cdd 557 PRINTS PR01009 Flagellar M-ring protein signature 352 376 3.2E-32 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TVD_06250 9cc65691fac19ceaa9a1079e102a2cdd 557 PRINTS PR01009 Flagellar M-ring protein signature 270 288 3.2E-32 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TVD_06250 9cc65691fac19ceaa9a1079e102a2cdd 557 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 26 555 9.4E-100 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TVD_06250 9cc65691fac19ceaa9a1079e102a2cdd 557 Pfam PF01514 Secretory protein of YscJ/FliF family 34 224 3.6E-65 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF TVD_06250 9cc65691fac19ceaa9a1079e102a2cdd 557 PIRSF PIRSF004862 6 556 2.6E-149 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TVD_06250 9cc65691fac19ceaa9a1079e102a2cdd 557 Gene3D G3DSA:3.30.300.30 125 226 3.9E-11 T 11-10-2018 TVD_12195 3b14aba2a0a76a754217eb4ee943d4d7 293 SUPERFAMILY SSF53335 49 265 2.97E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_12195 3b14aba2a0a76a754217eb4ee943d4d7 293 Pfam PF05050 Methyltransferase FkbM domain 95 261 2.5E-22 T 11-10-2018 IPR006342 Methyltransferase FkbM TVD_12195 3b14aba2a0a76a754217eb4ee943d4d7 293 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 92 236 1.0E-26 T 11-10-2018 IPR006342 Methyltransferase FkbM TVD_12195 3b14aba2a0a76a754217eb4ee943d4d7 293 Gene3D G3DSA:3.40.50.150 85 269 6.1E-33 T 11-10-2018 TVD_13785 49b5bf0ff627fc81f251b04bd009a9f5 672 PIRSF PIRSF001589 1 668 2.8E-140 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TVD_13785 49b5bf0ff627fc81f251b04bd009a9f5 672 Pfam PF00733 Asparagine synthase 254 626 2.9E-87 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TVD_13785 49b5bf0ff627fc81f251b04bd009a9f5 672 SUPERFAMILY SSF56235 1 231 1.03E-56 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_13785 49b5bf0ff627fc81f251b04bd009a9f5 672 Gene3D G3DSA:3.40.50.620 242 433 5.2E-38 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_13785 49b5bf0ff627fc81f251b04bd009a9f5 672 Gene3D G3DSA:3.40.50.620 479 609 2.0E-20 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_13785 49b5bf0ff627fc81f251b04bd009a9f5 672 SUPERFAMILY SSF52402 227 622 6.65E-67 T 11-10-2018 TVD_13785 49b5bf0ff627fc81f251b04bd009a9f5 672 Gene3D G3DSA:3.60.20.10 2 193 8.2E-53 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_13785 49b5bf0ff627fc81f251b04bd009a9f5 672 Pfam PF13537 Glutamine amidotransferase domain 50 171 5.1E-40 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TVD_13785 49b5bf0ff627fc81f251b04bd009a9f5 672 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 576 1.1E-127 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TVD_05850 a88980df1c74976285a701f1f205937b 422 Gene3D G3DSA:3.30.870.10 252 395 2.2E-27 T 11-10-2018 TVD_05850 a88980df1c74976285a701f1f205937b 422 Pfam PF13091 PLD-like domain 79 218 6.4E-11 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TVD_05850 a88980df1c74976285a701f1f205937b 422 Pfam PF13091 PLD-like domain 262 386 9.2E-30 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TVD_05850 a88980df1c74976285a701f1f205937b 422 SMART SM00155 335 362 1.2E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TVD_05850 a88980df1c74976285a701f1f205937b 422 SMART SM00155 159 186 0.0062 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TVD_05850 a88980df1c74976285a701f1f205937b 422 Gene3D G3DSA:3.30.870.10 54 250 9.9E-36 T 11-10-2018 TVD_05850 a88980df1c74976285a701f1f205937b 422 SUPERFAMILY SSF56024 210 409 1.61E-41 T 11-10-2018 TVD_05850 a88980df1c74976285a701f1f205937b 422 SUPERFAMILY SSF56024 57 250 8.48E-42 T 11-10-2018 TVD_11285 d22d6da6d5332372608895e46df114ef 383 Pfam PF15887 Putative zinc-binding metallo-peptidase 112 365 1.4E-103 T 11-10-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase TVD_11285 d22d6da6d5332372608895e46df114ef 383 PIRSF PIRSF012641 1 378 1.1E-133 T 11-10-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase TVD_11285 d22d6da6d5332372608895e46df114ef 383 Pfam PF10005 zinc-ribbon domain 3 107 4.2E-29 T 11-10-2018 IPR011201 Zinc-ribbon domain, bacteria TVD_04720 70502e550186aa6248dcac4e1f35bb7f 245 Pfam PF01061 ABC-2 type transporter 1 207 7.3E-36 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 TVD_04720 70502e550186aa6248dcac4e1f35bb7f 245 PRINTS PR00164 ABC-2 type transport system membrane protein signature 165 184 2.1E-10 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_04720 70502e550186aa6248dcac4e1f35bb7f 245 PRINTS PR00164 ABC-2 type transport system membrane protein signature 47 69 2.1E-10 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_04720 70502e550186aa6248dcac4e1f35bb7f 245 PRINTS PR00164 ABC-2 type transport system membrane protein signature 91 116 2.1E-10 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_04720 70502e550186aa6248dcac4e1f35bb7f 245 PRINTS PR00164 ABC-2 type transport system membrane protein signature 185 204 2.1E-10 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_04720 70502e550186aa6248dcac4e1f35bb7f 245 PIRSF PIRSF006648 1 242 1.0E-26 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_05590 1a8f0428c34bb32d72875a9c2cf6289c 223 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 35 208 8.7E-11 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component TVD_05590 1a8f0428c34bb32d72875a9c2cf6289c 223 SUPERFAMILY SSF159594 37 214 5.49E-13 T 11-10-2018 TVD_01865 16a5772daa1e64e52a0f449ff8875f6b 343 Gene3D G3DSA:3.40.50.300 144 328 2.7E-57 T 11-10-2018 TVD_01865 16a5772daa1e64e52a0f449ff8875f6b 343 Pfam PF02603 HPr Serine kinase N terminus 14 140 4.7E-15 T 11-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 TVD_01865 16a5772daa1e64e52a0f449ff8875f6b 343 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 15 318 8.1E-85 T 11-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 TVD_01865 16a5772daa1e64e52a0f449ff8875f6b 343 Gene3D G3DSA:3.40.1390.20 18 143 1.8E-13 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily TVD_01865 16a5772daa1e64e52a0f449ff8875f6b 343 SUPERFAMILY SSF53795 145 304 8.24E-30 T 11-10-2018 TVD_01865 16a5772daa1e64e52a0f449ff8875f6b 343 Pfam PF07475 HPr Serine kinase C-terminal domain 143 313 3.8E-55 T 11-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 TVD_01865 16a5772daa1e64e52a0f449ff8875f6b 343 SUPERFAMILY SSF75138 22 144 1.23E-15 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily TVD_10345 c371b1b1cec53b663893f934d04ad728 212 PRINTS PR00127 Clp protease catalytic subunit P signature 183 202 1.6E-51 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TVD_10345 c371b1b1cec53b663893f934d04ad728 212 PRINTS PR00127 Clp protease catalytic subunit P signature 105 122 1.6E-51 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TVD_10345 c371b1b1cec53b663893f934d04ad728 212 PRINTS PR00127 Clp protease catalytic subunit P signature 34 49 1.6E-51 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TVD_10345 c371b1b1cec53b663893f934d04ad728 212 PRINTS PR00127 Clp protease catalytic subunit P signature 74 94 1.6E-51 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TVD_10345 c371b1b1cec53b663893f934d04ad728 212 PRINTS PR00127 Clp protease catalytic subunit P signature 126 145 1.6E-51 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TVD_10345 c371b1b1cec53b663893f934d04ad728 212 Pfam PF00574 Clp protease 28 207 2.2E-86 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA TVD_10345 c371b1b1cec53b663893f934d04ad728 212 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 127 140 - T 11-10-2018 IPR033135 ClpP, histidine active site TVD_10345 c371b1b1cec53b663893f934d04ad728 212 SUPERFAMILY SSF52096 26 209 1.38E-73 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TVD_10345 c371b1b1cec53b663893f934d04ad728 212 Gene3D G3DSA:3.90.226.10 5 211 7.4E-83 T 11-10-2018 TVD_10345 c371b1b1cec53b663893f934d04ad728 212 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 18 208 44.402 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TVD_10345 c371b1b1cec53b663893f934d04ad728 212 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 105 116 - T 11-10-2018 IPR018215 ClpP, Ser active site TVD_10345 c371b1b1cec53b663893f934d04ad728 212 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 17 207 6.6E-103 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 SUPERFAMILY SSF82693 40 133 5.58E-24 T 11-10-2018 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 Gene3D G3DSA:3.30.2090.10 700 788 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 Gene3D G3DSA:3.30.70.1430 547 645 0.0 T 11-10-2018 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 PRINTS PR00702 Acriflavin resistance protein family signature 532 549 1.8E-52 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.8E-52 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 1.8E-52 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 1.8E-52 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.8E-52 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.8E-52 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 1.8E-52 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.8E-52 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 SUPERFAMILY SSF82693 546 640 1.88E-8 T 11-10-2018 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 SUPERFAMILY SSF82866 288 487 2.75E-41 T 11-10-2018 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 SUPERFAMILY SSF82714 701 784 7.72E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 Gene3D G3DSA:3.30.70.1440 646 845 0.0 T 11-10-2018 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 SUPERFAMILY SSF82693 138 311 3.4E-15 T 11-10-2018 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 Gene3D G3DSA:3.30.70.1430 40 796 0.0 T 11-10-2018 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 Pfam PF00873 AcrB/AcrD/AcrF family 5 1007 2.7E-255 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 Gene3D G3DSA:3.30.70.1320 134 323 0.0 T 11-10-2018 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 Gene3D G3DSA:3.30.2090.10 177 267 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 SUPERFAMILY SSF82866 784 1012 2.22E-53 T 11-10-2018 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 Gene3D G3DSA:1.20.1640.10 10 495 0.0 T 11-10-2018 TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 SUPERFAMILY SSF82714 181 263 1.12E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TVD_05435 eeefc8bffa7033d46699362a0b8de479 1024 Gene3D G3DSA:1.20.1640.10 496 1003 0.0 T 11-10-2018 TVD_07095 214d576b590324ccaebca3ebbdc31bf3 300 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 2 297 2.2E-54 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 TVD_07095 214d576b590324ccaebca3ebbdc31bf3 300 Pfam PF03186 CobD/Cbib protein 7 278 8.6E-90 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 TVD_07095 214d576b590324ccaebca3ebbdc31bf3 300 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 300 98.653 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 TVD_00220 6696632d95c37a9eb30aa22ff574a727 121 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 7 119 5.8E-34 T 11-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 TVD_00220 6696632d95c37a9eb30aa22ff574a727 121 SUPERFAMILY SSF81593 6 119 3.61E-35 T 11-10-2018 TVD_00220 6696632d95c37a9eb30aa22ff574a727 121 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 6 118 5.0E-30 T 11-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 TVD_00220 6696632d95c37a9eb30aa22ff574a727 121 Gene3D G3DSA:1.20.120.330 6 120 1.1E-40 T 11-10-2018 TVD_00520 3a76d1b7f8118794a81459f84469405e 100 TIGRFAM TIGR04353 PqqD_rel_X: PqqD family protein, HPr-rel-A system 21 92 4.5E-17 T 11-10-2018 IPR027599 PqqD family protein, HPr-rel-A system TVD_08420 0a55158c3ea51711779bba7c8758f3ff 324 SUPERFAMILY SSF56524 71 320 8.63E-84 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 TVD_08420 0a55158c3ea51711779bba7c8758f3ff 324 Gene3D G3DSA:3.90.420.10 62 324 2.6E-101 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 TVD_08420 0a55158c3ea51711779bba7c8758f3ff 324 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 6 324 53.165 T 11-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 TVD_08420 0a55158c3ea51711779bba7c8758f3ff 324 Pfam PF00174 Oxidoreductase molybdopterin binding domain 100 262 7.2E-28 T 11-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 TVD_08000 db3516905ffa619c5c2547cea011b5c6 328 Pfam PF01636 Phosphotransferase enzyme family 34 259 6.3E-41 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase TVD_08000 db3516905ffa619c5c2547cea011b5c6 328 Gene3D G3DSA:1.20.1270.170 148 309 5.9E-112 T 11-10-2018 TVD_08000 db3516905ffa619c5c2547cea011b5c6 328 Gene3D G3DSA:1.10.510.10 58 260 5.9E-112 T 11-10-2018 TVD_08000 db3516905ffa619c5c2547cea011b5c6 328 SUPERFAMILY SSF56112 4 324 4.52E-78 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily TVD_08000 db3516905ffa619c5c2547cea011b5c6 328 Gene3D G3DSA:3.30.200.70 11 107 5.9E-112 T 11-10-2018 TVD_08000 db3516905ffa619c5c2547cea011b5c6 328 Hamap MF_01497 Stress response kinase A [srkA]. 2 320 44.118 T 11-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 TVD_07885 e37a784d4290ca6c5a7566b1b9150c13 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 1.5E-116 T 11-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 TVD_07885 e37a784d4290ca6c5a7566b1b9150c13 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 243 1.0E-32 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TVD_07885 e37a784d4290ca6c5a7566b1b9150c13 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 9.5E-49 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TVD_07885 e37a784d4290ca6c5a7566b1b9150c13 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TVD_07885 e37a784d4290ca6c5a7566b1b9150c13 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 259 2.9E-23 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TVD_07885 e37a784d4290ca6c5a7566b1b9150c13 262 Pfam PF00460 Flagella basal body rod protein 5 35 1.4E-12 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TVD_07885 e37a784d4290ca6c5a7566b1b9150c13 262 SUPERFAMILY SSF117143 92 222 7.32E-36 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like TVD_09970 cc45b636a5ff1869f0c68a5824f20c83 420 Gene3D G3DSA:3.50.50.60 7 347 6.5E-84 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_09970 cc45b636a5ff1869f0c68a5824f20c83 420 Pfam PF01494 FAD binding domain 6 318 2.1E-32 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 TVD_09970 cc45b636a5ff1869f0c68a5824f20c83 420 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 399 4.2E-92 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 TVD_09970 cc45b636a5ff1869f0c68a5824f20c83 420 Gene3D G3DSA:3.30.9.50 80 272 6.5E-84 T 11-10-2018 TVD_09970 cc45b636a5ff1869f0c68a5824f20c83 420 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 4.2E-19 T 11-10-2018 TVD_09970 cc45b636a5ff1869f0c68a5824f20c83 420 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.2E-19 T 11-10-2018 TVD_09970 cc45b636a5ff1869f0c68a5824f20c83 420 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 4.2E-19 T 11-10-2018 TVD_09970 cc45b636a5ff1869f0c68a5824f20c83 420 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 4.2E-19 T 11-10-2018 TVD_09970 cc45b636a5ff1869f0c68a5824f20c83 420 SUPERFAMILY SSF51905 6 392 1.36E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_03610 415b7ea91778eb39ee9e7eb918c278f7 426 Gene3D G3DSA:3.10.20.600 232 326 3.8E-34 T 11-10-2018 TVD_03610 415b7ea91778eb39ee9e7eb918c278f7 426 SUPERFAMILY SSF140490 326 422 6.8E-37 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03610 415b7ea91778eb39ee9e7eb918c278f7 426 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 342 353 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03610 415b7ea91778eb39ee9e7eb918c278f7 426 SMART SM00928 329 374 2.9E-25 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03610 415b7ea91778eb39ee9e7eb918c278f7 426 SUPERFAMILY SSF142984 241 324 1.96E-26 T 11-10-2018 TVD_03610 415b7ea91778eb39ee9e7eb918c278f7 426 SUPERFAMILY SSF142019 5 239 1.44E-82 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03610 415b7ea91778eb39ee9e7eb918c278f7 426 Gene3D G3DSA:3.40.50.11540 52 231 9.3E-78 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03610 415b7ea91778eb39ee9e7eb918c278f7 426 Gene3D G3DSA:1.20.1440.230 327 424 4.2E-35 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03610 415b7ea91778eb39ee9e7eb918c278f7 426 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 332 412 3.3E-31 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03610 415b7ea91778eb39ee9e7eb918c278f7 426 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 13 415 1.8E-195 T 11-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03610 415b7ea91778eb39ee9e7eb918c278f7 426 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 219 1.7E-42 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03610 415b7ea91778eb39ee9e7eb918c278f7 426 Pfam PF10531 SLBB domain 243 291 2.7E-14 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03610 415b7ea91778eb39ee9e7eb918c278f7 426 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 167 182 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_08115 4959df9b698b33f8536e94441b3502f2 282 SUPERFAMILY SSF161098 86 268 6.28E-27 T 11-10-2018 IPR035906 MetI-like superfamily TVD_08115 4959df9b698b33f8536e94441b3502f2 282 Gene3D G3DSA:1.10.3720.10 89 275 4.5E-20 T 11-10-2018 IPR035906 MetI-like superfamily TVD_08115 4959df9b698b33f8536e94441b3502f2 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 271 1.5E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TVD_08115 4959df9b698b33f8536e94441b3502f2 282 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 75 272 7.2E-68 T 11-10-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 TVD_03945 bf2f7039b93dc945643dfad4dd97dd57 244 Pfam PF01936 NYN domain 7 139 1.0E-29 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type TVD_03945 bf2f7039b93dc945643dfad4dd97dd57 244 Gene3D G3DSA:1.10.10.1880 169 241 1.5E-27 T 11-10-2018 TVD_03945 bf2f7039b93dc945643dfad4dd97dd57 244 Pfam PF12872 OST-HTH/LOTUS domain 163 227 4.2E-15 T 11-10-2018 IPR025605 OST-HTH/LOTUS domain TVD_03945 bf2f7039b93dc945643dfad4dd97dd57 244 Gene3D G3DSA:3.40.50.1010 1 143 3.8E-12 T 11-10-2018 TVD_10915 477ed131d03680df739fa2936a56e17e 220 Gene3D G3DSA:2.40.50.140 7 75 9.6E-17 T 11-10-2018 TVD_10915 477ed131d03680df739fa2936a56e17e 220 Pfam PF02565 Recombination protein O C terminal 80 217 2.2E-7 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 TVD_10915 477ed131d03680df739fa2936a56e17e 220 Pfam PF11967 Recombination protein O N terminal 10 72 8.0E-14 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal TVD_10915 477ed131d03680df739fa2936a56e17e 220 SUPERFAMILY SSF50249 10 75 8.05E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_10915 477ed131d03680df739fa2936a56e17e 220 Gene3D G3DSA:1.20.1440.120 76 220 1.9E-29 T 11-10-2018 TVD_00365 7eaefdefe27aefa555efc2e72b3d4b73 419 Pfam PF00534 Glycosyl transferases group 1 218 385 3.3E-33 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TVD_00365 7eaefdefe27aefa555efc2e72b3d4b73 419 Gene3D G3DSA:3.40.50.2000 206 389 1.9E-67 T 11-10-2018 TVD_00365 7eaefdefe27aefa555efc2e72b3d4b73 419 Gene3D G3DSA:3.40.50.2000 96 205 1.9E-67 T 11-10-2018 TVD_00365 7eaefdefe27aefa555efc2e72b3d4b73 419 SUPERFAMILY SSF53756 49 404 4.28E-72 T 11-10-2018 TVD_00365 7eaefdefe27aefa555efc2e72b3d4b73 419 Pfam PF13439 Glycosyltransferase Family 4 81 209 6.7E-11 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 SMART SM00863 169 218 3.1E-26 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 635 35.717 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 SUPERFAMILY SSF55186 64 239 1.1E-70 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 632 1.8E-234 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 Gene3D G3DSA:3.30.54.20 130 186 1.0E-67 T 11-10-2018 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 Gene3D G3DSA:3.30.930.10 222 532 2.1E-128 T 11-10-2018 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 3.7E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 3.7E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 3.7E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 3.7E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 3.7E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 Pfam PF02824 TGS domain 4 61 1.5E-11 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 Gene3D G3DSA:3.40.50.800 533 638 1.7E-31 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 SUPERFAMILY SSF81271 3 61 4.8E-16 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 SUPERFAMILY SSF55681 242 527 1.04E-97 T 11-10-2018 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 3.9E-16 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 Gene3D G3DSA:3.10.20.30 3 63 3.0E-23 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 SUPERFAMILY SSF52954 530 636 1.51E-32 T 11-10-2018 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 Pfam PF03129 Anticodon binding domain 543 631 4.3E-21 T 11-10-2018 IPR004154 Anticodon-binding TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 322 530 8.3E-43 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_07985 27094e112e0606f2e5d3c91be27d3166 638 Gene3D G3DSA:3.30.980.10 69 221 1.0E-67 T 11-10-2018 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 692 30.907 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 Pfam PF00013 KH domain 556 613 7.8E-10 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 SUPERFAMILY SSF55666 143 233 4.91E-30 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 Gene3D G3DSA:3.30.1370.10 549 620 1.3E-21 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 SUPERFAMILY SSF50249 608 693 2.23E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 Gene3D G3DSA:2.40.50.140 621 692 2.5E-29 T 11-10-2018 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 SUPERFAMILY SSF54791 551 628 2.85E-17 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 SMART SM00316 619 689 3.4E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 319 1.8E-19 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 Gene3D G3DSA:3.30.230.70 232 548 3.0E-117 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 SMART SM00322 551 616 1.8E-12 T 11-10-2018 IPR004087 K Homology domain GO:0003676 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 SUPERFAMILY SSF54211 3 142 2.53E-50 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 PIRSF PIRSF005499 1 695 1.3E-299 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 Pfam PF03725 3' exoribonuclease family, domain 2 458 527 5.2E-7 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 Pfam PF03725 3' exoribonuclease family, domain 2 145 208 2.9E-11 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 SUPERFAMILY SSF54211 290 487 1.27E-49 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 SUPERFAMILY SSF55666 449 547 4.91E-30 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 Pfam PF00575 S1 RNA binding domain 619 689 2.3E-18 T 11-10-2018 IPR003029 S1 domain GO:0003676 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 5.1E-22 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 Pfam PF01138 3' exoribonuclease family, domain 1 14 142 1.3E-18 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 8 691 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TVD_03695 00e4869b9a046e9f1e1e312d1f1476e8 695 Gene3D G3DSA:3.30.230.70 2 227 3.8E-80 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TVD_00465 0ce951eb03f83e0570dec2c84b861d72 216 Pfam PF00583 Acetyltransferase (GNAT) family 119 175 4.3E-7 T 11-10-2018 IPR000182 GNAT domain TVD_00465 0ce951eb03f83e0570dec2c84b861d72 216 Gene3D G3DSA:3.40.630.30 56 188 1.0E-12 T 11-10-2018 TVD_00465 0ce951eb03f83e0570dec2c84b861d72 216 SUPERFAMILY SSF55729 41 182 5.32E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_06685 d8319b2b76991e0a1c936459a71d8ab6 377 Gene3D G3DSA:3.40.640.10 22 279 4.0E-95 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_06685 d8319b2b76991e0a1c936459a71d8ab6 377 Gene3D G3DSA:3.90.1150.10 10 360 4.0E-95 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_06685 d8319b2b76991e0a1c936459a71d8ab6 377 Pfam PF00266 Aminotransferase class-V 46 335 4.7E-45 T 11-10-2018 IPR000192 Aminotransferase class V domain TVD_06685 d8319b2b76991e0a1c936459a71d8ab6 377 SUPERFAMILY SSF53383 8 370 3.68E-80 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_09325 be35405726427afb900048b37517bf8c 140 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 22 103 1.4E-16 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like TVD_00670 179e05e6495ccf4fe2752972a292e343 632 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_00670 179e05e6495ccf4fe2752972a292e343 632 SMART SM00382 342 512 9.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_00670 179e05e6495ccf4fe2752972a292e343 632 SMART SM00382 28 229 5.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_00670 179e05e6495ccf4fe2752972a292e343 632 Gene3D G3DSA:3.40.50.300 281 545 1.7E-60 T 11-10-2018 TVD_00670 179e05e6495ccf4fe2752972a292e343 632 Gene3D G3DSA:1.10.287.380 555 632 3.3E-17 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 TVD_00670 179e05e6495ccf4fe2752972a292e343 632 SUPERFAMILY SSF52540 307 515 2.98E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_00670 179e05e6495ccf4fe2752972a292e343 632 Gene3D G3DSA:3.40.50.300 3 278 7.0E-60 T 11-10-2018 TVD_00670 179e05e6495ccf4fe2752972a292e343 632 Pfam PF00005 ABC transporter 19 184 4.1E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_00670 179e05e6495ccf4fe2752972a292e343 632 SUPERFAMILY SSF52540 3 244 1.08E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_00670 179e05e6495ccf4fe2752972a292e343 632 Pfam PF00005 ABC transporter 334 467 2.5E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_00670 179e05e6495ccf4fe2752972a292e343 632 Pfam PF16326 ABC transporter C-terminal domain 563 630 4.8E-19 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 TVD_10105 544a77eacd708c129d5b96e0ec8f4620 96 Pfam PF00708 Acylphosphatase 12 94 1.2E-23 T 11-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TVD_10105 544a77eacd708c129d5b96e0ec8f4620 96 ProSitePatterns PS00150 Acylphosphatase signature 1. 14 24 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TVD_10105 544a77eacd708c129d5b96e0ec8f4620 96 SUPERFAMILY SSF54975 6 87 1.2E-25 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TVD_10105 544a77eacd708c129d5b96e0ec8f4620 96 Gene3D G3DSA:3.30.70.100 1 95 5.1E-27 T 11-10-2018 TVD_10105 544a77eacd708c129d5b96e0ec8f4620 96 ProSitePatterns PS00151 Acylphosphatase signature 2. 38 54 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TVD_04085 157e5d4aa0bf71330a09ab4e42406b7c 302 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 46 134 1.6E-22 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 TVD_04085 157e5d4aa0bf71330a09ab4e42406b7c 302 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 31 300 8.1E-91 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 TVD_04085 157e5d4aa0bf71330a09ab4e42406b7c 302 Gene3D G3DSA:3.90.1170.20 28 300 2.3E-105 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 TVD_04085 157e5d4aa0bf71330a09ab4e42406b7c 302 PIRSF PIRSF006250 23 302 4.6E-91 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 TVD_04085 157e5d4aa0bf71330a09ab4e42406b7c 302 Gene3D G3DSA:3.20.20.70 145 291 2.3E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_04085 157e5d4aa0bf71330a09ab4e42406b7c 302 SUPERFAMILY SSF51690 137 300 2.94E-56 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 TVD_04085 157e5d4aa0bf71330a09ab4e42406b7c 302 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 137 299 1.0E-54 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 TVD_04085 157e5d4aa0bf71330a09ab4e42406b7c 302 SUPERFAMILY SSF54675 26 135 4.32E-26 T 11-10-2018 TVD_01555 cc699efdfa0a861a45bccb0aa1eea841 103 Pfam PF10052 Protein of unknown function (DUF2288) 13 98 5.5E-28 T 11-10-2018 IPR018741 Protein of unknown function DUF2288 TVD_10980 6e73c300955694d16136181af484c56a 242 SUPERFAMILY SSF52343 109 241 4.85E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_10980 6e73c300955694d16136181af484c56a 242 Gene3D G3DSA:2.40.30.10 9 107 7.7E-16 T 11-10-2018 TVD_10980 6e73c300955694d16136181af484c56a 242 Pfam PF00970 Oxidoreductase FAD-binding domain 15 109 4.0E-7 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 TVD_10980 6e73c300955694d16136181af484c56a 242 Pfam PF00175 Oxidoreductase NAD-binding domain 121 222 3.4E-15 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TVD_10980 6e73c300955694d16136181af484c56a 242 Gene3D G3DSA:3.40.50.80 112 242 1.2E-30 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_10980 6e73c300955694d16136181af484c56a 242 SUPERFAMILY SSF63380 7 113 2.65E-17 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TVD_12060 550327e7ad2eb58ad7aef10c8ec6cd09 109 Pfam PF00462 Glutaredoxin 16 80 4.1E-17 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 TVD_12060 550327e7ad2eb58ad7aef10c8ec6cd09 109 SUPERFAMILY SSF52833 1 104 3.15E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_12060 550327e7ad2eb58ad7aef10c8ec6cd09 109 PIRSF PIRSF005894 1 107 2.7E-48 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 TVD_12060 550327e7ad2eb58ad7aef10c8ec6cd09 109 Gene3D G3DSA:3.40.30.10 6 102 1.9E-32 T 11-10-2018 TVD_12060 550327e7ad2eb58ad7aef10c8ec6cd09 109 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 9.2E-45 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related TVD_03540 96cffcf70563019a5291a620f22acec4 159 SUPERFAMILY SSF46557 3 77 1.96E-28 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 TVD_03540 96cffcf70563019a5291a620f22acec4 159 Gene3D G3DSA:3.10.50.30 76 158 1.2E-31 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 TVD_03540 96cffcf70563019a5291a620f22acec4 159 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 TVD_03540 96cffcf70563019a5291a620f22acec4 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.355 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 TVD_03540 96cffcf70563019a5291a620f22acec4 159 PIRSF PIRSF006092 1 159 8.4E-53 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 TVD_03540 96cffcf70563019a5291a620f22acec4 159 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.4E-30 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 TVD_03540 96cffcf70563019a5291a620f22acec4 159 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 2.4E-57 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 TVD_03540 96cffcf70563019a5291a620f22acec4 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 157 5.7E-30 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 TVD_03540 96cffcf70563019a5291a620f22acec4 159 SUPERFAMILY SSF54534 82 157 7.06E-25 T 11-10-2018 TVD_03540 96cffcf70563019a5291a620f22acec4 159 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 TVD_03540 96cffcf70563019a5291a620f22acec4 159 Gene3D G3DSA:1.10.287.180 1 75 1.1E-31 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 TVD_03050 896bd597a8b9ebd4b7b7d7b899f23e36 488 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 65 261 7.1E-19 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TVD_03050 896bd597a8b9ebd4b7b7d7b899f23e36 488 SUPERFAMILY SSF53850 56 280 2.59E-26 T 11-10-2018 TVD_03050 896bd597a8b9ebd4b7b7d7b899f23e36 488 SMART SM00062 64 286 0.0035 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TVD_03050 896bd597a8b9ebd4b7b7d7b899f23e36 488 Pfam PF01464 Transglycosylase SLT domain 312 419 1.9E-21 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 TVD_03050 896bd597a8b9ebd4b7b7d7b899f23e36 488 Gene3D G3DSA:1.10.530.10 304 482 1.6E-33 T 11-10-2018 TVD_03050 896bd597a8b9ebd4b7b7d7b899f23e36 488 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 329 357 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 TVD_03050 896bd597a8b9ebd4b7b7d7b899f23e36 488 Gene3D G3DSA:3.40.190.10 150 243 3.1E-46 T 11-10-2018 TVD_03050 896bd597a8b9ebd4b7b7d7b899f23e36 488 Gene3D G3DSA:3.40.190.10 59 267 3.1E-46 T 11-10-2018 TVD_03050 896bd597a8b9ebd4b7b7d7b899f23e36 488 SUPERFAMILY SSF53955 281 416 9.76E-36 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TVD_03050 896bd597a8b9ebd4b7b7d7b899f23e36 488 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 20 488 39.477 T 11-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 TVD_01825 96f3377fee6ff47622a105d1904c3fe2 693 Gene3D G3DSA:3.55.50.30 260 374 2.0E-42 T 11-10-2018 TVD_01825 96f3377fee6ff47622a105d1904c3fe2 693 Gene3D G3DSA:2.60.40.3470 137 259 6.1E-32 T 11-10-2018 TVD_01825 96f3377fee6ff47622a105d1904c3fe2 693 SMART SM00965 303 351 3.7E-10 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TVD_01825 96f3377fee6ff47622a105d1904c3fe2 693 Pfam PF07660 Secretin and TonB N terminus short domain 303 350 1.0E-9 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TVD_01825 96f3377fee6ff47622a105d1904c3fe2 693 Gene3D G3DSA:3.30.1370.120 375 439 1.7E-10 T 11-10-2018 IPR038591 NolW-like superfamily TVD_01825 96f3377fee6ff47622a105d1904c3fe2 693 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 278 692 3.1E-158 T 11-10-2018 IPR013355 Type IV pilus secretin PilQ TVD_01825 96f3377fee6ff47622a105d1904c3fe2 693 Pfam PF00263 Bacterial type II and III secretion system protein 537 692 3.0E-47 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 TVD_01825 96f3377fee6ff47622a105d1904c3fe2 693 PRINTS PR00811 Bacterial general secretion pathway protein D signature 680 693 5.3E-17 T 11-10-2018 IPR001775 GspD/PilQ family TVD_01825 96f3377fee6ff47622a105d1904c3fe2 693 PRINTS PR00811 Bacterial general secretion pathway protein D signature 657 675 5.3E-17 T 11-10-2018 IPR001775 GspD/PilQ family TVD_01825 96f3377fee6ff47622a105d1904c3fe2 693 PRINTS PR00811 Bacterial general secretion pathway protein D signature 442 452 5.3E-17 T 11-10-2018 IPR001775 GspD/PilQ family TVD_01825 96f3377fee6ff47622a105d1904c3fe2 693 PRINTS PR00811 Bacterial general secretion pathway protein D signature 533 557 5.3E-17 T 11-10-2018 IPR001775 GspD/PilQ family TVD_01825 96f3377fee6ff47622a105d1904c3fe2 693 Gene3D G3DSA:2.60.40.3500 21 127 1.2E-7 T 11-10-2018 TVD_01825 96f3377fee6ff47622a105d1904c3fe2 693 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 638 671 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 TVD_01825 96f3377fee6ff47622a105d1904c3fe2 693 Pfam PF03958 Bacterial type II/III secretion system short domain 377 442 6.9E-12 T 11-10-2018 IPR005644 NolW-like TVD_01825 96f3377fee6ff47622a105d1904c3fe2 693 Pfam PF11741 AMIN domain 43 127 6.0E-9 T 11-10-2018 IPR021731 AMIN domain TVD_10085 43f97c7764ff6f3e14d6570ee0f760bd 94 SUPERFAMILY SSF143011 19 93 4.97E-16 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_10085 43f97c7764ff6f3e14d6570ee0f760bd 94 Gene3D G3DSA:3.30.2310.20 5 94 8.3E-27 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_10085 43f97c7764ff6f3e14d6570ee0f760bd 94 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 14 93 5.2E-21 T 11-10-2018 IPR007711 Toxin HigB-1 TVD_07725 e2d895a2b1a5039aca0878bb6500e049 346 Pfam PF00487 Fatty acid desaturase 59 301 3.4E-31 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 TVD_02400 6bb8369eb27eec3d1315dfbc8faddc6a 64 Pfam PF00831 Ribosomal L29 protein 5 60 4.3E-21 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02400 6bb8369eb27eec3d1315dfbc8faddc6a 64 SUPERFAMILY SSF46561 1 62 1.44E-19 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02400 6bb8369eb27eec3d1315dfbc8faddc6a 64 Gene3D G3DSA:1.10.287.310 1 63 1.0E-23 T 11-10-2018 TVD_02400 6bb8369eb27eec3d1315dfbc8faddc6a 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 7.8E-21 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02400 6bb8369eb27eec3d1315dfbc8faddc6a 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.666 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_12775 0c1d40f6eac8793ac6bd932b37dc5a93 276 Gene3D G3DSA:1.10.1040.10 146 274 3.2E-22 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TVD_12775 0c1d40f6eac8793ac6bd932b37dc5a93 276 PIRSF PIRSF000103 1 276 1.3E-67 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 TVD_12775 0c1d40f6eac8793ac6bd932b37dc5a93 276 Gene3D G3DSA:3.40.50.720 1 145 7.9E-39 T 11-10-2018 TVD_12775 0c1d40f6eac8793ac6bd932b37dc5a93 276 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 1 142 3.3E-27 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 TVD_12775 0c1d40f6eac8793ac6bd932b37dc5a93 276 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 148 267 2.8E-15 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 TVD_12775 0c1d40f6eac8793ac6bd932b37dc5a93 276 SUPERFAMILY SSF48179 147 269 9.86E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TVD_12775 0c1d40f6eac8793ac6bd932b37dc5a93 276 SUPERFAMILY SSF51735 1 146 9.21E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_05195 3bd9fa2671beba11c01419ee43946fa8 132 Gene3D G3DSA:3.30.460.10 2 102 9.1E-18 T 11-10-2018 TVD_05195 3bd9fa2671beba11c01419ee43946fa8 132 Pfam PF01909 Nucleotidyltransferase domain 8 76 1.7E-8 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TVD_05195 3bd9fa2671beba11c01419ee43946fa8 132 SUPERFAMILY SSF81301 6 104 4.16E-17 T 11-10-2018 TVD_03750 d1690c2742c12a017cde2ffab6b48d73 127 Pfam PF01844 HNH endonuclease 38 86 5.8E-12 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 TVD_03750 d1690c2742c12a017cde2ffab6b48d73 127 SMART SM00507 25 81 2.2E-5 T 11-10-2018 IPR003615 HNH nuclease TVD_09925 e3c01a6ef9cc1eb9f02627ad3b93d2d0 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 132 399 3.2E-87 T 11-10-2018 TVD_09925 e3c01a6ef9cc1eb9f02627ad3b93d2d0 418 SUPERFAMILY SSF53335 141 405 5.58E-81 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_09925 e3c01a6ef9cc1eb9f02627ad3b93d2d0 418 PIRSF PIRSF003085 13 415 2.3E-129 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 TVD_09925 e3c01a6ef9cc1eb9f02627ad3b93d2d0 418 Gene3D G3DSA:3.40.50.150 138 408 2.6E-101 T 11-10-2018 TVD_04215 706d6dc32b96fdc4fc0f7cba1d9e669a 369 SUPERFAMILY SSF55103 192 354 2.81E-7 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 TVD_04215 706d6dc32b96fdc4fc0f7cba1d9e669a 369 Gene3D G3DSA:3.30.465.10 58 177 3.1E-32 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TVD_04215 706d6dc32b96fdc4fc0f7cba1d9e669a 369 SUPERFAMILY SSF56176 12 178 2.62E-26 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TVD_04215 706d6dc32b96fdc4fc0f7cba1d9e669a 369 Pfam PF01565 FAD binding domain 11 140 1.4E-15 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TVD_06550 f37c08ebdc2956bfa329b00370f92d30 292 Gene3D G3DSA:3.90.550.10 2 292 4.5E-88 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_06550 f37c08ebdc2956bfa329b00370f92d30 292 Pfam PF00483 Nucleotidyl transferase 16 273 5.2E-28 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TVD_06550 f37c08ebdc2956bfa329b00370f92d30 292 SUPERFAMILY SSF53448 7 274 1.91E-63 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_06550 f37c08ebdc2956bfa329b00370f92d30 292 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 270 1.2E-113 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 TVD_08030 4c544f6f1693acb5e49310a51ebf1932 287 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 233 283 1.0E-8 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 TVD_08030 4c544f6f1693acb5e49310a51ebf1932 287 Pfam PF01106 NifU-like domain 219 283 1.3E-19 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 TVD_08030 4c544f6f1693acb5e49310a51ebf1932 287 SUPERFAMILY SSF117916 217 285 1.24E-16 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TVD_08030 4c544f6f1693acb5e49310a51ebf1932 287 Gene3D G3DSA:3.30.300.130 213 286 8.0E-21 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily TVD_13750 b8069d44ce2fcf32b5abb9d9bbcc3467 403 SUPERFAMILY SSF56935 38 399 2.09E-6 T 11-10-2018 TVD_01875 2c8374b96ccc62689dcf7a89ef071cca 112 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 101 8.3E-37 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 TVD_01875 2c8374b96ccc62689dcf7a89ef071cca 112 SUPERFAMILY SSF69754 1 102 4.58E-35 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like TVD_01875 2c8374b96ccc62689dcf7a89ef071cca 112 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 96 3.1E-29 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 TVD_01875 2c8374b96ccc62689dcf7a89ef071cca 112 Gene3D G3DSA:3.30.160.100 1 109 1.9E-36 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like TVD_06935 2f327413c751911afd1fc13ad1c068c3 566 SUPERFAMILY SSF56219 271 565 2.59E-30 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TVD_06935 2f327413c751911afd1fc13ad1c068c3 566 Gene3D G3DSA:3.60.10.10 282 564 1.7E-28 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TVD_06935 2f327413c751911afd1fc13ad1c068c3 566 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 286 517 2.5E-10 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TVD_13355 ca4a06a24bab9aae539c7829700400ee 316 SUPERFAMILY SSF103190 38 145 6.8E-14 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily TVD_13355 ca4a06a24bab9aae539c7829700400ee 316 Gene3D G3DSA:3.30.450.20 37 137 4.4E-9 T 11-10-2018 TVD_09210 8f6d085fb72f5576cf12dda5d35985be 1128 SUPERFAMILY SSF82861 852 935 8.37E-6 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 TVD_09210 8f6d085fb72f5576cf12dda5d35985be 1128 Gene3D G3DSA:2.30.30.60 952 1001 1.4E-12 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily TVD_09210 8f6d085fb72f5576cf12dda5d35985be 1128 Gene3D G3DSA:3.30.70.100 1004 1098 6.3E-24 T 11-10-2018 TVD_09210 8f6d085fb72f5576cf12dda5d35985be 1128 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 966 1000 - T 11-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 TVD_09210 8f6d085fb72f5576cf12dda5d35985be 1128 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 504 833 1.5E-74 T 11-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 TVD_09210 8f6d085fb72f5576cf12dda5d35985be 1128 SUPERFAMILY SSF50182 937 1002 8.5E-17 T 11-10-2018 IPR010920 LSM domain superfamily TVD_09210 8f6d085fb72f5576cf12dda5d35985be 1128 Pfam PF00924 Mechanosensitive ion channel 895 1093 3.7E-55 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TVD_09210 8f6d085fb72f5576cf12dda5d35985be 1128 SUPERFAMILY SSF82689 1004 1104 5.62E-29 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 TVD_01730 7d4f81fc1dfd8d449e4cce177ca046fe 57 Pfam PF01679 Proteolipid membrane potential modulator 9 54 2.1E-20 T 11-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 TVD_01730 7d4f81fc1dfd8d449e4cce177ca046fe 57 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 12 27 - T 11-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 TVD_02525 1932866c6b5bd6be7d6f6e6b952e41f6 496 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 443 5.6E-95 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TVD_02525 1932866c6b5bd6be7d6f6e6b952e41f6 496 SUPERFAMILY SSF56317 219 469 3.27E-40 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TVD_02525 1932866c6b5bd6be7d6f6e6b952e41f6 496 Gene3D G3DSA:3.60.110.10 218 464 1.0E-15 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TVD_02525 1932866c6b5bd6be7d6f6e6b952e41f6 496 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 480 21.015 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 TVD_02525 1932866c6b5bd6be7d6f6e6b952e41f6 496 Pfam PF00795 Carbon-nitrogen hydrolase 223 460 8.0E-30 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TVD_04000 c3d9f06ade3becc6fbc8a1fe558106fa 87 Pfam PF13937 Domain of unknown function (DUF4212) 8 85 1.5E-34 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted TVD_04000 c3d9f06ade3becc6fbc8a1fe558106fa 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 10 86 2.3E-35 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted TVD_04050 c6f1c054a48a76d1f151d1b20e86ee88 196 Pfam PF02132 RecR protein 38 76 4.8E-12 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger TVD_04050 c6f1c054a48a76d1f151d1b20e86ee88 196 SUPERFAMILY SSF111304 4 196 5.75E-69 T 11-10-2018 IPR023627 Recombination protein RecR TVD_04050 c6f1c054a48a76d1f151d1b20e86ee88 196 Hamap MF_00017 Recombination protein RecR [recR]. 1 196 96.214 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 TVD_04050 c6f1c054a48a76d1f151d1b20e86ee88 196 SMART SM00493 78 163 7.1E-12 T 11-10-2018 IPR006171 TOPRIM domain TVD_04050 c6f1c054a48a76d1f151d1b20e86ee88 196 Gene3D G3DSA:1.10.8.420 1 49 5.9E-16 T 11-10-2018 TVD_04050 c6f1c054a48a76d1f151d1b20e86ee88 196 Gene3D G3DSA:3.40.1360.10 75 196 2.0E-39 T 11-10-2018 TVD_04050 c6f1c054a48a76d1f151d1b20e86ee88 196 TIGRFAM TIGR00615 recR: recombination protein RecR 3 194 8.8E-70 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 TVD_04050 c6f1c054a48a76d1f151d1b20e86ee88 196 Pfam PF13662 Toprim domain 79 169 3.7E-21 T 11-10-2018 IPR006171 TOPRIM domain TVD_05395 b3b4345807214f9f6d1807467563dd7e 216 SUPERFAMILY SSF53335 56 198 5.84E-17 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_05395 b3b4345807214f9f6d1807467563dd7e 216 Gene3D G3DSA:3.40.50.150 40 200 4.5E-12 T 11-10-2018 TVD_05395 b3b4345807214f9f6d1807467563dd7e 216 Pfam PF13489 Methyltransferase domain 62 198 1.7E-16 T 11-10-2018 TVD_01480 f499927710b70f417527dd9aa082c907 143 Gene3D G3DSA:1.25.10.10 2 135 1.3E-12 T 11-10-2018 IPR011989 Armadillo-like helical TVD_01480 f499927710b70f417527dd9aa082c907 143 SUPERFAMILY SSF48371 33 125 8.92E-9 T 11-10-2018 IPR016024 Armadillo-type fold TVD_09705 7650dab2bf873a87fedec339a962f947 204 SUPERFAMILY SSF50630 90 191 4.64E-7 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily TVD_09705 7650dab2bf873a87fedec339a962f947 204 Pfam PF13975 gag-polyprotein putative aspartyl protease 100 189 2.7E-12 T 11-10-2018 TVD_09705 7650dab2bf873a87fedec339a962f947 204 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 85 201 1.0E-20 T 11-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal TVD_09705 7650dab2bf873a87fedec339a962f947 204 Gene3D G3DSA:2.40.70.10 80 203 1.1E-19 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily TVD_05765 6300706ab963b3c583f0caf7fb9043c9 259 SUPERFAMILY SSF53335 23 210 9.22E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_05765 6300706ab963b3c583f0caf7fb9043c9 259 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 50 183 2.9E-26 T 11-10-2018 IPR006342 Methyltransferase FkbM TVD_05765 6300706ab963b3c583f0caf7fb9043c9 259 Pfam PF05050 Methyltransferase FkbM domain 52 244 4.2E-13 T 11-10-2018 IPR006342 Methyltransferase FkbM TVD_05765 6300706ab963b3c583f0caf7fb9043c9 259 Gene3D G3DSA:3.40.50.150 38 227 8.6E-25 T 11-10-2018 TVD_08790 c9a5e2e7320c0e91f69e103f63130500 778 Pfam PF00069 Protein kinase domain 29 255 4.1E-28 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 TVD_08790 c9a5e2e7320c0e91f69e103f63130500 778 Gene3D G3DSA:3.30.200.20 4 91 3.6E-13 T 11-10-2018 TVD_08790 c9a5e2e7320c0e91f69e103f63130500 778 SUPERFAMILY SSF109604 281 555 2.39E-44 T 11-10-2018 TVD_08790 c9a5e2e7320c0e91f69e103f63130500 778 Gene3D G3DSA:3.30.450.40 618 777 4.7E-20 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_08790 c9a5e2e7320c0e91f69e103f63130500 778 Pfam PF01590 GAF domain 632 773 6.2E-10 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_08790 c9a5e2e7320c0e91f69e103f63130500 778 SMART SM00065 631 777 1.4E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_08790 c9a5e2e7320c0e91f69e103f63130500 778 Pfam PF08668 HDOD domain 296 483 1.4E-35 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD TVD_08790 c9a5e2e7320c0e91f69e103f63130500 778 Gene3D G3DSA:1.10.510.10 94 275 3.7E-33 T 11-10-2018 TVD_08790 c9a5e2e7320c0e91f69e103f63130500 778 SUPERFAMILY SSF56112 10 263 2.05E-48 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily TVD_08790 c9a5e2e7320c0e91f69e103f63130500 778 Gene3D G3DSA:1.10.3210.10 281 559 3.8E-51 T 11-10-2018 TVD_08790 c9a5e2e7320c0e91f69e103f63130500 778 SUPERFAMILY SSF55781 632 777 3.93E-18 T 11-10-2018 TVD_09800 a09c3b535055c6c38fd2d85c419ba670 156 Pfam PF13686 DsrE/DsrF/DrsH-like family 4 155 2.5E-52 T 11-10-2018 IPR032836 DsrE2-like family TVD_09800 a09c3b535055c6c38fd2d85c419ba670 156 SUPERFAMILY SSF75169 5 155 2.35E-20 T 11-10-2018 IPR027396 DsrEFH-like TVD_09800 a09c3b535055c6c38fd2d85c419ba670 156 Gene3D G3DSA:3.40.1260.10 1 156 5.4E-40 T 11-10-2018 IPR027396 DsrEFH-like TVD_09765 9ca97002b468fad3a226bf4974c2c155 144 Pfam PF00072 Response regulator receiver domain 10 127 1.6E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_09765 9ca97002b468fad3a226bf4974c2c155 144 SUPERFAMILY SSF52172 6 132 1.31E-33 T 11-10-2018 IPR011006 CheY-like superfamily TVD_09765 9ca97002b468fad3a226bf4974c2c155 144 SMART SM00448 8 129 7.3E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_09765 9ca97002b468fad3a226bf4974c2c155 144 Gene3D G3DSA:3.40.50.2300 1 141 3.2E-39 T 11-10-2018 TVD_07835 4d4a6ccc722f482c731a783844a7ffdb 340 SUPERFAMILY SSF53335 30 334 9.62E-11 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_07835 4d4a6ccc722f482c731a783844a7ffdb 340 PIRSF PIRSF018005 2 338 5.3E-110 T 11-10-2018 IPR017804 Methyltransferase EgtD-like GO:0008168 TVD_07835 4d4a6ccc722f482c731a783844a7ffdb 340 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 29 334 1.3E-104 T 11-10-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 TVD_07835 4d4a6ccc722f482c731a783844a7ffdb 340 Gene3D G3DSA:3.40.50.150 55 236 9.7E-50 T 11-10-2018 TVD_07835 4d4a6ccc722f482c731a783844a7ffdb 340 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 30 336 1.6E-104 T 11-10-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent TVD_10230 2ba4631478017a25169bec7482ef9eb0 513 SUPERFAMILY SSF50249 40 149 4.76E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_10230 2ba4631478017a25169bec7482ef9eb0 513 Pfam PF00575 S1 RNA binding domain 39 77 9.6E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 TVD_10230 2ba4631478017a25169bec7482ef9eb0 513 SMART SM00316 38 143 9.5E-8 T 11-10-2018 IPR022967 RNA-binding domain, S1 TVD_10230 2ba4631478017a25169bec7482ef9eb0 513 Gene3D G3DSA:2.40.50.140 32 148 4.4E-29 T 11-10-2018 TVD_10230 2ba4631478017a25169bec7482ef9eb0 513 Pfam PF10150 Ribonuclease E/G family 145 417 9.3E-97 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 TVD_10230 2ba4631478017a25169bec7482ef9eb0 513 Gene3D G3DSA:3.40.1260.20 426 512 1.9E-5 T 11-10-2018 TVD_10230 2ba4631478017a25169bec7482ef9eb0 513 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 15 449 6.8E-150 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 TVD_02030 c8f808586b73a6049737808607ee334b 225 Gene3D G3DSA:1.10.760.10 121 214 4.1E-24 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_02030 c8f808586b73a6049737808607ee334b 225 Gene3D G3DSA:1.10.760.10 31 112 2.0E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_02030 c8f808586b73a6049737808607ee334b 225 SUPERFAMILY SSF46626 125 214 9.9E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_02030 c8f808586b73a6049737808607ee334b 225 SUPERFAMILY SSF46626 8 117 3.31E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_02030 c8f808586b73a6049737808607ee334b 225 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 35 108 1.4E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_02030 c8f808586b73a6049737808607ee334b 225 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 142 212 5.5E-7 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_02030 c8f808586b73a6049737808607ee334b 225 PIRSF PIRSF000005 3 217 5.3E-58 T 11-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 TVD_03315 23cbbac96e20fdcc26434b9536c66a8a 198 Pfam PF08745 PINc domain ribonuclease 3 188 6.5E-60 T 11-10-2018 IPR014856 PIN-domain ribonuclease TVD_03315 23cbbac96e20fdcc26434b9536c66a8a 198 Hamap MF_01078 UPF0278 protein . 1 192 28.939 T 11-10-2018 IPR014856 PIN-domain ribonuclease TVD_03315 23cbbac96e20fdcc26434b9536c66a8a 198 TIGRFAM TIGR03875 RNA_lig_partner: RNA ligase partner, MJ_0950 family 3 188 8.6E-65 T 11-10-2018 IPR014856 PIN-domain ribonuclease TVD_05295 1fc49f58310fe8f6ea706e41a93bf711 763 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 161 1.3E-9 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain TVD_05295 1fc49f58310fe8f6ea706e41a93bf711 763 SUPERFAMILY SSF141868 513 749 6.02E-68 T 11-10-2018 IPR035919 EAL domain superfamily TVD_05295 1fc49f58310fe8f6ea706e41a93bf711 763 SMART SM00052 507 750 3.0E-55 T 11-10-2018 IPR001633 EAL domain TVD_05295 1fc49f58310fe8f6ea706e41a93bf711 763 SUPERFAMILY SSF55073 339 495 1.1E-46 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_05295 1fc49f58310fe8f6ea706e41a93bf711 763 SMART SM00267 323 495 2.0E-56 T 11-10-2018 IPR000160 GGDEF domain TVD_05295 1fc49f58310fe8f6ea706e41a93bf711 763 Pfam PF00990 Diguanylate cyclase, GGDEF domain 334 491 6.8E-44 T 11-10-2018 IPR000160 GGDEF domain TVD_05295 1fc49f58310fe8f6ea706e41a93bf711 763 SUPERFAMILY SSF55785 193 321 6.63E-14 T 11-10-2018 IPR035965 PAS domain superfamily TVD_05295 1fc49f58310fe8f6ea706e41a93bf711 763 Pfam PF08448 PAS fold 210 324 1.6E-8 T 11-10-2018 IPR013656 PAS fold-4 TVD_05295 1fc49f58310fe8f6ea706e41a93bf711 763 Gene3D G3DSA:3.20.20.450 497 751 5.6E-76 T 11-10-2018 IPR035919 EAL domain superfamily TVD_05295 1fc49f58310fe8f6ea706e41a93bf711 763 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 330 495 1.7E-43 T 11-10-2018 IPR000160 GGDEF domain TVD_05295 1fc49f58310fe8f6ea706e41a93bf711 763 Gene3D G3DSA:3.30.70.270 323 496 6.0E-55 T 11-10-2018 TVD_05295 1fc49f58310fe8f6ea706e41a93bf711 763 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 210 329 3.6E-9 T 11-10-2018 IPR000014 PAS domain TVD_05295 1fc49f58310fe8f6ea706e41a93bf711 763 SMART SM00091 204 273 9.1E-4 T 11-10-2018 IPR000014 PAS domain TVD_05295 1fc49f58310fe8f6ea706e41a93bf711 763 Pfam PF00563 EAL domain 513 742 3.2E-59 T 11-10-2018 IPR001633 EAL domain TVD_05295 1fc49f58310fe8f6ea706e41a93bf711 763 Gene3D G3DSA:3.30.450.20 195 320 2.3E-19 T 11-10-2018 TVD_02175 b5a47bc35f010c93d328b2fdda0e8d64 401 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 340 364 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_02175 b5a47bc35f010c93d328b2fdda0e8d64 401 Pfam PF01098 Cell cycle protein 29 382 4.4E-105 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_02175 b5a47bc35f010c93d328b2fdda0e8d64 401 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 27 381 6.9E-126 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_02175 b5a47bc35f010c93d328b2fdda0e8d64 401 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 22 391 40.43 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 TVD_11210 fe7836c11eb96d0ad100584b2eb34b35 165 Pfam PF11697 Protein of unknown function (DUF3293) 74 145 1.8E-17 T 11-10-2018 IPR021710 Protein of unknown function DUF3293 TVD_04865 f91169db3ffd6bd403daad6e6b182976 271 Gene3D G3DSA:2.160.10.10 63 184 3.3E-37 T 11-10-2018 TVD_04865 f91169db3ffd6bd403daad6e6b182976 271 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 122 150 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 TVD_04865 f91169db3ffd6bd403daad6e6b182976 271 Gene3D G3DSA:1.10.3130.10 1 62 1.2E-22 T 11-10-2018 TVD_04865 f91169db3ffd6bd403daad6e6b182976 271 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 1 162 1.8E-77 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 TVD_04865 f91169db3ffd6bd403daad6e6b182976 271 SUPERFAMILY SSF51161 2 172 2.63E-57 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily TVD_04865 f91169db3ffd6bd403daad6e6b182976 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 113 147 9.5E-8 T 11-10-2018 IPR001451 Hexapeptide repeat TVD_04865 f91169db3ffd6bd403daad6e6b182976 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 69 104 3.0E-4 T 11-10-2018 IPR001451 Hexapeptide repeat TVD_04865 f91169db3ffd6bd403daad6e6b182976 271 PIRSF PIRSF000441 1 230 8.0E-87 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 TVD_02560 8cdde8888709b56b03c78a14e7822153 216 Gene3D G3DSA:3.40.50.620 1 207 1.1E-62 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_02560 8cdde8888709b56b03c78a14e7822153 216 Pfam PF01467 Cytidylyltransferase-like 4 180 3.2E-29 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TVD_02560 8cdde8888709b56b03c78a14e7822153 216 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 2 64 7.0E-9 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TVD_02560 8cdde8888709b56b03c78a14e7822153 216 SUPERFAMILY SSF52374 2 209 4.07E-54 T 11-10-2018 TVD_02560 8cdde8888709b56b03c78a14e7822153 216 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 4 206 1.5E-48 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TVD_02560 8cdde8888709b56b03c78a14e7822153 216 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 207 29.288 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TVD_09395 51181486c8915a1874a4da5eb423f034 445 Pfam PF13641 Glycosyltransferase like family 2 69 302 7.5E-20 T 11-10-2018 TVD_09395 51181486c8915a1874a4da5eb423f034 445 Gene3D G3DSA:3.90.550.10 60 274 5.7E-26 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_09395 51181486c8915a1874a4da5eb423f034 445 SUPERFAMILY SSF53448 55 342 6.99E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_07880 9e7fa872743ae3f9c335b1142517fe4e 232 Pfam PF02107 Flagellar L-ring protein 50 231 8.1E-63 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TVD_07880 9e7fa872743ae3f9c335b1142517fe4e 232 PRINTS PR01008 Flagellar L-ring protein signature 171 187 1.4E-24 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TVD_07880 9e7fa872743ae3f9c335b1142517fe4e 232 PRINTS PR01008 Flagellar L-ring protein signature 208 222 1.4E-24 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TVD_07880 9e7fa872743ae3f9c335b1142517fe4e 232 PRINTS PR01008 Flagellar L-ring protein signature 145 160 1.4E-24 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TVD_07880 9e7fa872743ae3f9c335b1142517fe4e 232 PRINTS PR01008 Flagellar L-ring protein signature 72 84 1.4E-24 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TVD_07880 9e7fa872743ae3f9c335b1142517fe4e 232 PRINTS PR01008 Flagellar L-ring protein signature 192 206 1.4E-24 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TVD_07880 9e7fa872743ae3f9c335b1142517fe4e 232 Hamap MF_00415 Flagellar L-ring protein [flgH]. 8 229 26.911 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TVD_02340 6ff0dc22996becfb23585861a4cff241 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 35.435 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 TVD_02340 6ff0dc22996becfb23585861a4cff241 155 Pfam PF00177 Ribosomal protein S7p/S5e 1 148 2.3E-63 T 11-10-2018 IPR023798 Ribosomal protein S7 domain TVD_02340 6ff0dc22996becfb23585861a4cff241 155 PIRSF PIRSF002122 2 155 6.8E-55 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 TVD_02340 6ff0dc22996becfb23585861a4cff241 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 3.7E-65 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 TVD_02340 6ff0dc22996becfb23585861a4cff241 155 Gene3D G3DSA:1.10.455.10 2 154 2.2E-55 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily TVD_02340 6ff0dc22996becfb23585861a4cff241 155 SUPERFAMILY SSF47973 6 148 6.54E-55 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily TVD_11515 9a0892b6f39aa6157c74528dd0c148b8 437 Pfam PF01494 FAD binding domain 1 316 4.0E-17 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 TVD_11515 9a0892b6f39aa6157c74528dd0c148b8 437 SUPERFAMILY SSF51905 1 358 1.12E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_11515 9a0892b6f39aa6157c74528dd0c148b8 437 Gene3D G3DSA:3.50.50.60 1 410 7.9E-119 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_04885 d8a83515f6f60015e9b46eca39932473 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 3.3E-34 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 TVD_04885 d8a83515f6f60015e9b46eca39932473 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 106 5.9E-51 T 11-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 TVD_04885 d8a83515f6f60015e9b46eca39932473 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 3.4E-22 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 TVD_04885 d8a83515f6f60015e9b46eca39932473 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 TVD_04885 d8a83515f6f60015e9b46eca39932473 107 Gene3D G3DSA:2.60.300.12 2 107 8.6E-36 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 TVD_04885 d8a83515f6f60015e9b46eca39932473 107 SUPERFAMILY SSF89360 1 96 1.23E-30 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 TVD_12710 76267df84a47574b6a4ff45ad214512f 238 Pfam PF01168 Alanine racemase, N-terminal domain 8 230 1.2E-27 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 TVD_12710 76267df84a47574b6a4ff45ad214512f 238 SUPERFAMILY SSF51419 6 228 9.29E-74 T 11-10-2018 IPR029066 PLP-binding barrel TVD_12710 76267df84a47574b6a4ff45ad214512f 238 Gene3D G3DSA:3.20.20.10 4 237 1.0E-81 T 11-10-2018 IPR029066 PLP-binding barrel TVD_12710 76267df84a47574b6a4ff45ad214512f 238 PIRSF PIRSF004848 1 236 1.6E-66 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TVD_12710 76267df84a47574b6a4ff45ad214512f 238 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 5.7E-66 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TVD_12710 76267df84a47574b6a4ff45ad214512f 238 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TVD_12710 76267df84a47574b6a4ff45ad214512f 238 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 31.525 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 TVD_00120 c9b9aa37036e3077c6ee7b3564bc871b 207 Hamap MF_01405 dITP/XTP pyrophosphatase. 6 200 48.68 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 TVD_00120 c9b9aa37036e3077c6ee7b3564bc871b 207 SUPERFAMILY SSF52972 6 199 2.12E-69 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TVD_00120 c9b9aa37036e3077c6ee7b3564bc871b 207 Gene3D G3DSA:3.90.950.10 1 203 4.6E-78 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TVD_00120 c9b9aa37036e3077c6ee7b3564bc871b 207 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 8 198 6.0E-59 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 TVD_00120 c9b9aa37036e3077c6ee7b3564bc871b 207 Pfam PF01725 Ham1 family 8 196 6.1E-55 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 TVD_10350 1e8456512a20737ea66d538b91814097 435 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 155 230 1.3E-13 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TVD_10350 1e8456512a20737ea66d538b91814097 435 SUPERFAMILY SSF54534 90 241 2.55E-32 T 11-10-2018 TVD_10350 1e8456512a20737ea66d538b91814097 435 Hamap MF_00303 Trigger factor [tig]. 1 417 22.244 T 11-10-2018 IPR005215 Trigger factor GO:0015031 TVD_10350 1e8456512a20737ea66d538b91814097 435 Gene3D G3DSA:3.10.50.40 150 246 9.5E-102 T 11-10-2018 TVD_10350 1e8456512a20737ea66d538b91814097 435 PIRSF PIRSF003095 1 433 2.9E-127 T 11-10-2018 IPR005215 Trigger factor GO:0015031 TVD_10350 1e8456512a20737ea66d538b91814097 435 SUPERFAMILY SSF102735 1 131 6.54E-41 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 TVD_10350 1e8456512a20737ea66d538b91814097 435 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 2.1E-38 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 TVD_10350 1e8456512a20737ea66d538b91814097 435 TIGRFAM TIGR00115 tig: trigger factor 11 411 3.0E-143 T 11-10-2018 IPR005215 Trigger factor GO:0015031 TVD_10350 1e8456512a20737ea66d538b91814097 435 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 8.4E-44 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 TVD_10350 1e8456512a20737ea66d538b91814097 435 Gene3D G3DSA:1.10.3120.10 116 416 9.5E-102 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 TVD_10350 1e8456512a20737ea66d538b91814097 435 Gene3D G3DSA:3.30.70.1050 1 115 3.2E-39 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 TVD_10350 1e8456512a20737ea66d538b91814097 435 SUPERFAMILY SSF109998 248 428 8.63E-47 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily TVD_07140 150acbb8311efac40f67a537ec4de1b9 248 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 16 237 2.8E-65 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 TVD_07140 150acbb8311efac40f67a537ec4de1b9 248 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 112 119 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 TVD_07140 150acbb8311efac40f67a537ec4de1b9 248 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 13 236 42.567 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 TVD_07140 150acbb8311efac40f67a537ec4de1b9 248 SUPERFAMILY SSF53448 14 236 5.18E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_07140 150acbb8311efac40f67a537ec4de1b9 248 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 15 235 2.3E-67 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 TVD_07140 150acbb8311efac40f67a537ec4de1b9 248 Gene3D G3DSA:3.90.550.10 9 242 6.6E-69 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_05675 e465d75ef1b0b296b58906e5c3cce6bb 662 Gene3D G3DSA:3.40.50.300 31 301 2.6E-42 T 11-10-2018 TVD_05675 e465d75ef1b0b296b58906e5c3cce6bb 662 SMART SM00487 29 324 0.0025 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_05675 e465d75ef1b0b296b58906e5c3cce6bb 662 SUPERFAMILY SSF52540 28 251 2.16E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_05675 e465d75ef1b0b296b58906e5c3cce6bb 662 SUPERFAMILY SSF52540 55 614 2.18E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_05675 e465d75ef1b0b296b58906e5c3cce6bb 662 Pfam PF00270 DEAD/DEAH box helicase 53 251 4.3E-7 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TVD_05675 e465d75ef1b0b296b58906e5c3cce6bb 662 SMART SM00491 494 625 6.9E-34 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 TVD_05675 e465d75ef1b0b296b58906e5c3cce6bb 662 Pfam PF13307 Helicase C-terminal domain 480 637 2.5E-34 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 TVD_05675 e465d75ef1b0b296b58906e5c3cce6bb 662 Gene3D G3DSA:3.40.50.300 462 656 2.1E-32 T 11-10-2018 TVD_08510 3ede9290e4a540cd4bdcb5c153a774c3 608 Pfam PF02151 UvrB/uvrC motif 208 241 1.1E-9 T 11-10-2018 IPR001943 UVR domain GO:0005515 TVD_08510 3ede9290e4a540cd4bdcb5c153a774c3 608 SUPERFAMILY SSF82771 20 104 3.4E-24 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TVD_08510 3ede9290e4a540cd4bdcb5c153a774c3 608 SUPERFAMILY SSF46600 195 246 1.03E-12 T 11-10-2018 IPR036876 UVR domain superfamily TVD_08510 3ede9290e4a540cd4bdcb5c153a774c3 608 SMART SM00278 553 572 1.6 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TVD_08510 3ede9290e4a540cd4bdcb5c153a774c3 608 SMART SM00278 585 604 99.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 TVD_08510 3ede9290e4a540cd4bdcb5c153a774c3 608 Pfam PF01541 GIY-YIG catalytic domain 22 97 3.1E-10 T 11-10-2018 IPR000305 GIY-YIG endonuclease TVD_08510 3ede9290e4a540cd4bdcb5c153a774c3 608 Pfam PF14520 Helix-hairpin-helix domain 554 604 3.0E-7 T 11-10-2018 TVD_08510 3ede9290e4a540cd4bdcb5c153a774c3 608 SMART SM00465 20 102 2.6E-20 T 11-10-2018 IPR000305 GIY-YIG endonuclease TVD_08510 3ede9290e4a540cd4bdcb5c153a774c3 608 Gene3D G3DSA:3.40.1440.10 9 106 4.4E-33 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TVD_08510 3ede9290e4a540cd4bdcb5c153a774c3 608 Hamap MF_00203 UvrABC system protein C [uvrC]. 7 604 28.694 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 TVD_08510 3ede9290e4a540cd4bdcb5c153a774c3 608 Gene3D G3DSA:1.10.150.20 552 606 5.4E-22 T 11-10-2018 TVD_08510 3ede9290e4a540cd4bdcb5c153a774c3 608 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 12 586 7.3E-192 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 TVD_08510 3ede9290e4a540cd4bdcb5c153a774c3 608 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 539 4.0E-52 T 11-10-2018 IPR001162 UvrC family homology region TVD_08510 3ede9290e4a540cd4bdcb5c153a774c3 608 SUPERFAMILY SSF47781 518 607 5.72E-23 T 11-10-2018 IPR010994 RuvA domain 2-like TVD_08510 3ede9290e4a540cd4bdcb5c153a774c3 608 Gene3D G3DSA:3.30.420.340 379 539 4.1E-50 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily TVD_13310 fd434aa5319db2d17febfe1baa09ae8e 86 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 68 4.3E-15 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 TVD_13310 fd434aa5319db2d17febfe1baa09ae8e 86 Gene3D G3DSA:3.30.2320.50 1 76 1.7E-18 T 11-10-2018 TVD_12990 d9e92bc703543ecca3ad1e5c10ebc53f 365 SUPERFAMILY SSF55874 204 355 4.98E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_12990 d9e92bc703543ecca3ad1e5c10ebc53f 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 303 3.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_12990 d9e92bc703543ecca3ad1e5c10ebc53f 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 354 3.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_12990 d9e92bc703543ecca3ad1e5c10ebc53f 365 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 336 3.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_12990 d9e92bc703543ecca3ad1e5c10ebc53f 365 Gene3D G3DSA:1.10.287.130 142 196 6.5E-13 T 11-10-2018 TVD_12990 d9e92bc703543ecca3ad1e5c10ebc53f 365 SMART SM00388 138 203 7.7E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_12990 d9e92bc703543ecca3ad1e5c10ebc53f 365 SUPERFAMILY SSF47384 128 195 1.14E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TVD_12990 d9e92bc703543ecca3ad1e5c10ebc53f 365 Pfam PF00512 His Kinase A (phospho-acceptor) domain 143 195 5.5E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TVD_12990 d9e92bc703543ecca3ad1e5c10ebc53f 365 SMART SM00387 242 357 2.1E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_12990 d9e92bc703543ecca3ad1e5c10ebc53f 365 Gene3D G3DSA:3.30.450.20 16 121 4.9E-12 T 11-10-2018 TVD_12990 d9e92bc703543ecca3ad1e5c10ebc53f 365 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 243 354 1.6E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_12990 d9e92bc703543ecca3ad1e5c10ebc53f 365 Gene3D G3DSA:3.30.565.10 200 356 5.0E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_12990 d9e92bc703543ecca3ad1e5c10ebc53f 365 SUPERFAMILY SSF55785 17 108 4.54E-7 T 11-10-2018 IPR035965 PAS domain superfamily TVD_06990 fd3f2fa62b0770832594777103adee5f 277 Pfam PF12146 Serine aminopeptidase, S33 74 176 1.0E-10 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 TVD_06990 fd3f2fa62b0770832594777103adee5f 277 SUPERFAMILY SSF53474 17 268 1.62E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_06990 fd3f2fa62b0770832594777103adee5f 277 Gene3D G3DSA:3.40.50.1820 30 267 4.8E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_04285 f7443d27e29bb6d6dbc77d4b617e0e15 192 SUPERFAMILY SSF52218 1 191 6.13E-38 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TVD_04285 f7443d27e29bb6d6dbc77d4b617e0e15 192 Gene3D G3DSA:3.40.50.360 2 190 9.5E-35 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TVD_04285 f7443d27e29bb6d6dbc77d4b617e0e15 192 Pfam PF02525 Flavodoxin-like fold 3 186 9.9E-31 T 11-10-2018 IPR003680 Flavodoxin-like fold TVD_05855 05b2bf06a3cfae6a4faa5421bde7ac55 181 SUPERFAMILY SSF52799 43 176 5.03E-33 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like TVD_05855 05b2bf06a3cfae6a4faa5421bde7ac55 181 Gene3D G3DSA:3.90.190.10 12 180 8.3E-37 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like TVD_05855 05b2bf06a3cfae6a4faa5421bde7ac55 181 SMART SM00404 60 180 0.0056 T 11-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic TVD_07395 595ed33858a4cdb2ef53cd90d05081bf 214 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 184 197 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TVD_07395 595ed33858a4cdb2ef53cd90d05081bf 214 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 12 214 36.29 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TVD_07395 595ed33858a4cdb2ef53cd90d05081bf 214 PIRSF PIRSF000190 1 214 2.7E-76 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TVD_07395 595ed33858a4cdb2ef53cd90d05081bf 214 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 174 214 1.5E-18 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TVD_07395 595ed33858a4cdb2ef53cd90d05081bf 214 SUPERFAMILY SSF50475 18 214 8.05E-64 T 11-10-2018 TVD_07395 595ed33858a4cdb2ef53cd90d05081bf 214 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 45 118 7.4E-23 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TVD_07395 595ed33858a4cdb2ef53cd90d05081bf 214 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 6 214 2.7E-74 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 TVD_07395 595ed33858a4cdb2ef53cd90d05081bf 214 Gene3D G3DSA:2.30.110.10 1 214 1.3E-81 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TVD_04485 975b297580130181c6e493c8aaea84b5 157 Pfam PF01899 Na+/H+ ion antiporter subunit 7 155 1.0E-42 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 TVD_04485 975b297580130181c6e493c8aaea84b5 157 PIRSF PIRSF019239 1 157 2.7E-44 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 TVD_01535 c2e932608bc1d9644e3d98d5496be101 431 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 38 154 6.5E-10 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TVD_01535 c2e932608bc1d9644e3d98d5496be101 431 Gene3D G3DSA:3.90.760.10 360 431 7.2E-28 T 11-10-2018 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 TVD_01535 c2e932608bc1d9644e3d98d5496be101 431 Gene3D G3DSA:3.50.50.60 39 349 4.0E-107 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_01535 c2e932608bc1d9644e3d98d5496be101 431 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 362 430 4.6E-29 T 11-10-2018 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 TVD_01535 c2e932608bc1d9644e3d98d5496be101 431 SUPERFAMILY SSF51905 38 357 2.22E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_01535 c2e932608bc1d9644e3d98d5496be101 431 SUPERFAMILY SSF51905 150 286 6.86E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_01535 c2e932608bc1d9644e3d98d5496be101 431 SUPERFAMILY SSF55424 361 431 4.94E-21 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TVD_01535 c2e932608bc1d9644e3d98d5496be101 431 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 3 28 9.0E-6 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TVD_01535 c2e932608bc1d9644e3d98d5496be101 431 Gene3D G3DSA:3.50.50.60 152 287 4.0E-107 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_11860 950403e73df497ffdbf13bcf99eb911f 184 SUPERFAMILY SSF55021 10 85 1.41E-15 T 11-10-2018 TVD_11860 950403e73df497ffdbf13bcf99eb911f 184 Gene3D G3DSA:3.30.70.260 95 180 7.5E-15 T 11-10-2018 TVD_11860 950403e73df497ffdbf13bcf99eb911f 184 Pfam PF13740 ACT domain 12 83 6.0E-16 T 11-10-2018 TVD_11860 950403e73df497ffdbf13bcf99eb911f 184 Gene3D G3DSA:3.30.70.260 9 89 7.6E-20 T 11-10-2018 TVD_11860 950403e73df497ffdbf13bcf99eb911f 184 PIRSF PIRSF028103 9 184 1.4E-47 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 TVD_11860 950403e73df497ffdbf13bcf99eb911f 184 SUPERFAMILY SSF55021 96 182 2.5E-16 T 11-10-2018 TVD_09465 6b4d82a9d40b25c924a98d83577638f6 83 TIGRFAM TIGR02703 carboxysome_A: carboxysome peptide A 1 81 3.5E-46 T 11-10-2018 IPR014076 Carboxysome peptide A TVD_09465 6b4d82a9d40b25c924a98d83577638f6 83 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 78 3.0E-23 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml TVD_09465 6b4d82a9d40b25c924a98d83577638f6 83 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 10 81 1.0E-28 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml TVD_09465 6b4d82a9d40b25c924a98d83577638f6 83 SUPERFAMILY SSF159133 1 81 4.45E-26 T 11-10-2018 IPR036677 EutN/Ccml superfamily TVD_09465 6b4d82a9d40b25c924a98d83577638f6 83 Gene3D G3DSA:2.40.50.220 1 83 8.5E-33 T 11-10-2018 IPR036677 EutN/Ccml superfamily TVD_03575 a99b5c068c1a9858b0baca50b8ee33a8 127 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 74 2.4E-26 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TVD_03575 a99b5c068c1a9858b0baca50b8ee33a8 127 Pfam PF03840 Preprotein translocase SecG subunit 5 74 5.1E-22 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TVD_03575 a99b5c068c1a9858b0baca50b8ee33a8 127 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 3.0E-35 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TVD_03575 a99b5c068c1a9858b0baca50b8ee33a8 127 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 3.0E-35 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TVD_03575 a99b5c068c1a9858b0baca50b8ee33a8 127 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 3.0E-35 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TVD_03575 a99b5c068c1a9858b0baca50b8ee33a8 127 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 3.0E-35 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TVD_11195 eae32a09af5239c8f36d1259cfe854a7 473 Gene3D G3DSA:3.30.870.10 300 463 4.9E-25 T 11-10-2018 TVD_11195 eae32a09af5239c8f36d1259cfe854a7 473 SUPERFAMILY SSF56024 101 305 3.14E-47 T 11-10-2018 TVD_11195 eae32a09af5239c8f36d1259cfe854a7 473 Pfam PF13396 Phospholipase_D-nuclease N-terminal 17 58 2.0E-8 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal TVD_11195 eae32a09af5239c8f36d1259cfe854a7 473 SUPERFAMILY SSF56024 261 458 3.59E-43 T 11-10-2018 TVD_11195 eae32a09af5239c8f36d1259cfe854a7 473 PIRSF PIRSF000850 358 439 0.015 T 11-10-2018 TVD_11195 eae32a09af5239c8f36d1259cfe854a7 473 PIRSF PIRSF000850 107 185 8.4 T 11-10-2018 TVD_11195 eae32a09af5239c8f36d1259cfe854a7 473 PIRSF PIRSF000850 301 362 0.0052 T 11-10-2018 TVD_11195 eae32a09af5239c8f36d1259cfe854a7 473 SMART SM00155 386 413 9.0E-7 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TVD_11195 eae32a09af5239c8f36d1259cfe854a7 473 SMART SM00155 209 236 0.0015 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TVD_11195 eae32a09af5239c8f36d1259cfe854a7 473 Pfam PF13091 PLD-like domain 315 439 5.0E-26 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TVD_11195 eae32a09af5239c8f36d1259cfe854a7 473 Pfam PF13091 PLD-like domain 128 269 2.1E-15 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TVD_11195 eae32a09af5239c8f36d1259cfe854a7 473 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 9 473 1.5E-88 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 TVD_11195 eae32a09af5239c8f36d1259cfe854a7 473 Gene3D G3DSA:3.30.870.10 104 289 1.1E-43 T 11-10-2018 TVD_11040 7b0d4779d19afa1d3e08f597aef028b6 415 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 48 277 5.0E-77 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 TVD_11040 7b0d4779d19afa1d3e08f597aef028b6 415 Gene3D G3DSA:3.40.710.10 47 302 3.4E-87 T 11-10-2018 TVD_11040 7b0d4779d19afa1d3e08f597aef028b6 415 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 306 394 1.5E-17 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TVD_11040 7b0d4779d19afa1d3e08f597aef028b6 415 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 137 154 2.1E-19 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TVD_11040 7b0d4779d19afa1d3e08f597aef028b6 415 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 81 92 2.1E-19 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TVD_11040 7b0d4779d19afa1d3e08f597aef028b6 415 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 164 177 2.1E-19 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TVD_11040 7b0d4779d19afa1d3e08f597aef028b6 415 SUPERFAMILY SSF69189 306 396 1.59E-19 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TVD_11040 7b0d4779d19afa1d3e08f597aef028b6 415 Gene3D G3DSA:2.60.410.10 305 394 1.7E-24 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TVD_11040 7b0d4779d19afa1d3e08f597aef028b6 415 SMART SM00936 304 394 2.1E-23 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 TVD_11040 7b0d4779d19afa1d3e08f597aef028b6 415 SUPERFAMILY SSF56601 9 302 1.51E-80 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like TVD_02245 63482f4029481876a1df041dd3028557 256 Gene3D G3DSA:2.60.440.10 6 254 3.1E-73 T 11-10-2018 IPR027462 Z ring-associated protein D, C-terminal TVD_02245 63482f4029481876a1df041dd3028557 256 Pfam PF07072 Cell division protein 19 229 1.2E-65 T 11-10-2018 IPR009777 Cell division protein ZapD TVD_02245 63482f4029481876a1df041dd3028557 256 Gene3D G3DSA:1.10.3900.10 13 180 3.1E-73 T 11-10-2018 TVD_02245 63482f4029481876a1df041dd3028557 256 SUPERFAMILY SSF160950 5 254 1.96E-69 T 11-10-2018 IPR036268 ZapD domain superfamily TVD_02245 63482f4029481876a1df041dd3028557 256 Hamap MF_01092 Cell division protein ZapD [zapD]. 4 254 30.328 T 11-10-2018 IPR009777 Cell division protein ZapD TVD_07615 4b726a09be986ab2963bf7f2d88ebfa1 523 Pfam PF02321 Outer membrane efflux protein 57 282 5.1E-17 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_07615 4b726a09be986ab2963bf7f2d88ebfa1 523 Pfam PF02321 Outer membrane efflux protein 310 501 1.8E-21 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_07615 4b726a09be986ab2963bf7f2d88ebfa1 523 SUPERFAMILY SSF56954 1 504 6.15E-61 T 11-10-2018 TVD_03585 db022f63e2f86c8b7a357a0d49419ec2 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 20.563 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 TVD_03585 db022f63e2f86c8b7a357a0d49419ec2 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 21 117 1.7E-40 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03585 db022f63e2f86c8b7a357a0d49419ec2 118 Gene3D G3DSA:1.20.58.1610 1 118 1.6E-45 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_13600 c31a5c82ecfd8038bb7cb7db7274325e 616 SUPERFAMILY SSF53697 246 616 2.04E-101 T 11-10-2018 TVD_13600 c31a5c82ecfd8038bb7cb7db7274325e 616 Gene3D G3DSA:3.60.20.10 2 242 1.4E-71 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_13600 c31a5c82ecfd8038bb7cb7db7274325e 616 Pfam PF01380 SIS domain 292 419 4.5E-28 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TVD_13600 c31a5c82ecfd8038bb7cb7db7274325e 616 Pfam PF01380 SIS domain 467 598 5.7E-23 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 TVD_13600 c31a5c82ecfd8038bb7cb7db7274325e 616 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 616 38.534 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 TVD_13600 c31a5c82ecfd8038bb7cb7db7274325e 616 Gene3D G3DSA:3.40.50.10490 250 615 4.2E-137 T 11-10-2018 TVD_13600 c31a5c82ecfd8038bb7cb7db7274325e 616 SUPERFAMILY SSF56235 2 233 6.26E-65 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_13600 c31a5c82ecfd8038bb7cb7db7274325e 616 Gene3D G3DSA:3.40.50.10490 451 601 4.2E-137 T 11-10-2018 TVD_13600 c31a5c82ecfd8038bb7cb7db7274325e 616 Pfam PF13522 Glutamine amidotransferase domain 64 175 7.0E-20 T 11-10-2018 TVD_13600 c31a5c82ecfd8038bb7cb7db7274325e 616 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 616 2.4E-235 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 TVD_01595 b94a576282572757695bbf3e670bbd02 738 Pfam PF00271 Helicase conserved C-terminal domain 529 595 1.7E-4 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_01595 b94a576282572757695bbf3e670bbd02 738 SUPERFAMILY SSF52540 206 380 1.53E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01595 b94a576282572757695bbf3e670bbd02 738 SUPERFAMILY SSF52540 471 619 3.62E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01595 b94a576282572757695bbf3e670bbd02 738 Pfam PF00270 DEAD/DEAH box helicase 211 371 1.9E-12 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TVD_01595 b94a576282572757695bbf3e670bbd02 738 SMART SM00487 205 400 2.3E-18 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_01595 b94a576282572757695bbf3e670bbd02 738 Gene3D G3DSA:1.10.8.630 6 115 1.2E-32 T 11-10-2018 TVD_01595 b94a576282572757695bbf3e670bbd02 738 Gene3D G3DSA:3.40.50.300 201 384 5.1E-72 T 11-10-2018 TVD_01595 b94a576282572757695bbf3e670bbd02 738 Hamap MF_00983 Probable primosomal protein N' [priA]. 10 737 23.875 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 TVD_01595 b94a576282572757695bbf3e670bbd02 738 TIGRFAM TIGR00595 priA: primosomal protein N' 229 735 8.7E-171 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 TVD_01595 b94a576282572757695bbf3e670bbd02 738 SMART SM00490 499 596 6.9E-5 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_11295 28906a675db36a1c4bba47134c3ec252 158 SUPERFAMILY SSF51182 43 149 3.34E-19 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TVD_11295 28906a675db36a1c4bba47134c3ec252 158 Pfam PF07883 Cupin domain 79 143 1.0E-11 T 11-10-2018 IPR013096 Cupin 2, conserved barrel TVD_11295 28906a675db36a1c4bba47134c3ec252 158 Gene3D G3DSA:2.60.120.10 41 158 1.8E-19 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TVD_12725 0c5bc2a479876c2c3e2de2b814961c76 127 SUPERFAMILY SSF46458 11 125 3.3E-24 T 11-10-2018 IPR009050 Globin-like superfamily TVD_12725 0c5bc2a479876c2c3e2de2b814961c76 127 Gene3D G3DSA:1.10.490.10 10 126 7.1E-26 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TVD_12725 0c5bc2a479876c2c3e2de2b814961c76 127 Pfam PF01152 Bacterial-like globin 11 101 9.8E-8 T 11-10-2018 IPR001486 Truncated hemoglobin GO:0019825 TVD_02780 79da3a6408424b0216cdb846714d2e7b 155 SUPERFAMILY SSF48371 64 109 2.99E-5 T 11-10-2018 IPR016024 Armadillo-type fold TVD_10185 0dce507c70fcf80b8fb5fba3c4e53098 154 SMART SM00450 44 152 2.5E-7 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_10185 0dce507c70fcf80b8fb5fba3c4e53098 154 SUPERFAMILY SSF52821 37 154 5.76E-20 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_10185 0dce507c70fcf80b8fb5fba3c4e53098 154 Pfam PF00581 Rhodanese-like domain 47 147 4.6E-12 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_10185 0dce507c70fcf80b8fb5fba3c4e53098 154 Gene3D G3DSA:3.40.250.10 37 153 1.2E-17 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_11045 a9bcaf6f8a1ba219d26ea2f1664e4fec 307 Gene3D G3DSA:3.30.70.1070 231 304 9.2E-9 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TVD_11045 a9bcaf6f8a1ba219d26ea2f1664e4fec 307 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 8 168 25.017 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 TVD_11045 a9bcaf6f8a1ba219d26ea2f1664e4fec 307 Pfam PF05036 Sporulation related domain 227 295 6.4E-11 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 TVD_11045 a9bcaf6f8a1ba219d26ea2f1664e4fec 307 SUPERFAMILY SSF50685 76 167 5.58E-11 T 11-10-2018 IPR036908 RlpA-like domain superfamily TVD_11045 a9bcaf6f8a1ba219d26ea2f1664e4fec 307 Pfam PF03330 Lytic transglycolase 76 165 1.1E-27 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain TVD_11045 a9bcaf6f8a1ba219d26ea2f1664e4fec 307 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 78 172 1.8E-46 T 11-10-2018 IPR012997 Rare lipoprotein A TVD_11045 a9bcaf6f8a1ba219d26ea2f1664e4fec 307 Gene3D G3DSA:2.40.40.10 75 168 1.8E-39 T 11-10-2018 IPR036908 RlpA-like domain superfamily TVD_11045 a9bcaf6f8a1ba219d26ea2f1664e4fec 307 SUPERFAMILY SSF110997 227 297 4.18E-12 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TVD_03820 96a53507768f8ccf87f8e2e47cc0bfaf 203 Gene3D G3DSA:1.10.357.10 10 198 5.5E-39 T 11-10-2018 TVD_03820 96a53507768f8ccf87f8e2e47cc0bfaf 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 5.0E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TVD_03820 96a53507768f8ccf87f8e2e47cc0bfaf 203 SUPERFAMILY SSF48498 85 196 1.22E-10 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily TVD_03820 96a53507768f8ccf87f8e2e47cc0bfaf 203 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 60 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TVD_03820 96a53507768f8ccf87f8e2e47cc0bfaf 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.4E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TVD_03820 96a53507768f8ccf87f8e2e47cc0bfaf 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.4E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TVD_03820 96a53507768f8ccf87f8e2e47cc0bfaf 203 SUPERFAMILY SSF46689 7 85 1.8E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_04320 e4c4e371a7e92b8fe7c3dfd57d1ccd9d 315 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 14 280 5.1E-99 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 TVD_04320 e4c4e371a7e92b8fe7c3dfd57d1ccd9d 315 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 17 247 1.3E-37 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 TVD_04320 e4c4e371a7e92b8fe7c3dfd57d1ccd9d 315 PRINTS PR00987 Glutamyl-tRNA synthetase signature 201 209 7.0E-12 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TVD_04320 e4c4e371a7e92b8fe7c3dfd57d1ccd9d 315 PRINTS PR00987 Glutamyl-tRNA synthetase signature 46 59 7.0E-12 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TVD_04320 e4c4e371a7e92b8fe7c3dfd57d1ccd9d 315 PRINTS PR00987 Glutamyl-tRNA synthetase signature 185 195 7.0E-12 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TVD_04320 e4c4e371a7e92b8fe7c3dfd57d1ccd9d 315 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 42 7.0E-12 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TVD_04320 e4c4e371a7e92b8fe7c3dfd57d1ccd9d 315 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 29 7.0E-12 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TVD_04320 e4c4e371a7e92b8fe7c3dfd57d1ccd9d 315 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 14 309 39.014 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 TVD_04320 e4c4e371a7e92b8fe7c3dfd57d1ccd9d 315 Gene3D G3DSA:3.40.50.620 15 291 7.1E-87 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_04320 e4c4e371a7e92b8fe7c3dfd57d1ccd9d 315 SUPERFAMILY SSF52374 14 293 4.22E-76 T 11-10-2018 TVD_04320 e4c4e371a7e92b8fe7c3dfd57d1ccd9d 315 Gene3D G3DSA:3.40.50.620 89 233 7.1E-87 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_13010 c46325b35930b539493cc49711e7c718 241 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 47 219 7.6E-44 T 11-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG TVD_13010 c46325b35930b539493cc49711e7c718 241 Gene3D G3DSA:3.40.50.450 24 223 3.5E-67 T 11-10-2018 TVD_13010 c46325b35930b539493cc49711e7c718 241 Pfam PF03641 Possible lysine decarboxylase 89 218 2.0E-33 T 11-10-2018 IPR031100 LOG family TVD_13010 c46325b35930b539493cc49711e7c718 241 SUPERFAMILY SSF102405 17 220 7.63E-62 T 11-10-2018 TVD_06020 bcd1ec1ddef6c36ffa1360b691daac9c 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 160 316 7.5E-46 T 11-10-2018 IPR000160 GGDEF domain TVD_06020 bcd1ec1ddef6c36ffa1360b691daac9c 322 SUPERFAMILY SSF55785 13 105 6.81E-10 T 11-10-2018 IPR035965 PAS domain superfamily TVD_06020 bcd1ec1ddef6c36ffa1360b691daac9c 322 SMART SM00267 149 320 1.0E-56 T 11-10-2018 IPR000160 GGDEF domain TVD_06020 bcd1ec1ddef6c36ffa1360b691daac9c 322 SUPERFAMILY SSF55073 165 318 2.28E-46 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_06020 bcd1ec1ddef6c36ffa1360b691daac9c 322 Gene3D G3DSA:3.30.70.270 158 320 1.5E-55 T 11-10-2018 TVD_06020 bcd1ec1ddef6c36ffa1360b691daac9c 322 Pfam PF08448 PAS fold 27 116 2.6E-7 T 11-10-2018 IPR013656 PAS fold-4 TVD_06020 bcd1ec1ddef6c36ffa1360b691daac9c 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 159 318 5.4E-46 T 11-10-2018 IPR000160 GGDEF domain TVD_06020 bcd1ec1ddef6c36ffa1360b691daac9c 322 Gene3D G3DSA:3.30.450.20 8 157 2.7E-13 T 11-10-2018 TVD_09405 91cb1608c06ec503d240568bcf3324db 188 Gene3D G3DSA:3.10.450.50 55 188 1.9E-43 T 11-10-2018 TVD_09405 91cb1608c06ec503d240568bcf3324db 188 PIRSF PIRSF028470 43 188 6.8E-55 T 11-10-2018 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related TVD_09405 91cb1608c06ec503d240568bcf3324db 188 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 70 186 1.6E-18 T 11-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 TVD_09405 91cb1608c06ec503d240568bcf3324db 188 SUPERFAMILY SSF54427 60 185 6.92E-28 T 11-10-2018 IPR032710 NTF2-like domain superfamily TVD_09405 91cb1608c06ec503d240568bcf3324db 188 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 71 186 2.1E-21 T 11-10-2018 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 TVD_07605 15f69f32fb3e647a663e841ada2307fa 182 SUPERFAMILY SSF56925 42 182 5.49E-7 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TVD_13690 3c390df773c6d3f9d0f1d8edd2c81551 218 SUPERFAMILY SSF52317 2 210 2.52E-50 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_13690 3c390df773c6d3f9d0f1d8edd2c81551 218 PIRSF PIRSF000495 2 212 7.6E-62 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 TVD_13690 3c390df773c6d3f9d0f1d8edd2c81551 218 Pfam PF00117 Glutamine amidotransferase class-I 6 198 3.2E-16 T 11-10-2018 IPR017926 Glutamine amidotransferase TVD_13690 3c390df773c6d3f9d0f1d8edd2c81551 218 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 210 33.65 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 TVD_13690 3c390df773c6d3f9d0f1d8edd2c81551 218 Gene3D G3DSA:3.40.50.880 1 213 7.9E-67 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_13690 3c390df773c6d3f9d0f1d8edd2c81551 218 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 209 2.9E-59 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 TVD_06870 be8ad30ba2606ca1027ef81f5682a02a 279 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 187 204 - T 11-10-2018 IPR000540 Flagellar motor protein MotA, conserved site TVD_06870 be8ad30ba2606ca1027ef81f5682a02a 279 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 220 1.2E-20 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 334 915 9.0E-260 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 SUPERFAMILY SSF50447 817 913 2.95E-33 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 Gene3D G3DSA:3.30.56.50 2 51 8.5E-9 T 11-10-2018 TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 418 571 1.5E-32 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 Pfam PF00009 Elongation factor Tu GTP binding domain 420 574 2.7E-33 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 Gene3D G3DSA:3.40.50.10050 710 816 5.8E-34 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 SUPERFAMILY SSF52540 412 585 1.36E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 913 17.305 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 60 95 1.6E-12 T 11-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 SUPERFAMILY SSF52156 694 822 1.05E-34 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 Gene3D G3DSA:2.40.30.10 587 705 3.5E-42 T 11-10-2018 TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 Pfam PF11987 Translation-initiation factor 2 700 805 2.6E-35 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 SUPERFAMILY SSF50447 588 670 1.16E-24 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 3.1E-6 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 339 389 7.0E-15 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 ProSitePatterns PS01176 Initiation factor 2 signature. 866 888 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 Gene3D G3DSA:2.40.30.10 817 914 2.4E-32 T 11-10-2018 TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 SUPERFAMILY SSF46955 3 51 2.75E-9 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily TVD_03675 5f1d73a8acc01a80e96d4261c6664d0c 915 Gene3D G3DSA:3.40.50.300 413 586 1.4E-71 T 11-10-2018 TVD_09415 baf05c3960069e3e617560ce3e2a162b 773 Gene3D G3DSA:3.40.50.410 577 757 1.6E-11 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TVD_09415 baf05c3960069e3e617560ce3e2a162b 773 SMART SM00327 581 766 5.3E-6 T 11-10-2018 IPR002035 von Willebrand factor, type A TVD_09415 baf05c3960069e3e617560ce3e2a162b 773 Pfam PF00092 von Willebrand factor type A domain 584 745 4.8E-6 T 11-10-2018 IPR002035 von Willebrand factor, type A TVD_09415 baf05c3960069e3e617560ce3e2a162b 773 SUPERFAMILY SSF53300 582 768 1.26E-16 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TVD_05690 aa241ff382f1b292f49a3f2586609514 143 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 131 3.0E-25 T 11-10-2018 IPR000014 PAS domain TVD_05690 aa241ff382f1b292f49a3f2586609514 143 Pfam PF13426 PAS domain 19 124 3.1E-25 T 11-10-2018 IPR000014 PAS domain TVD_05690 aa241ff382f1b292f49a3f2586609514 143 SUPERFAMILY SSF55785 15 125 1.77E-30 T 11-10-2018 IPR035965 PAS domain superfamily TVD_05690 aa241ff382f1b292f49a3f2586609514 143 SMART SM00086 83 125 6.0E-13 T 11-10-2018 IPR001610 PAC motif TVD_05690 aa241ff382f1b292f49a3f2586609514 143 SMART SM00091 8 77 3.6E-4 T 11-10-2018 IPR000014 PAS domain TVD_05690 aa241ff382f1b292f49a3f2586609514 143 Gene3D G3DSA:3.30.450.20 5 143 6.3E-52 T 11-10-2018 TVD_07560 453563dbe9bb837bdb2a92f69426eca2 341 Gene3D G3DSA:2.60.40.420 21 331 1.5E-44 T 11-10-2018 IPR008972 Cupredoxin TVD_07560 453563dbe9bb837bdb2a92f69426eca2 341 SUPERFAMILY SSF49503 25 169 1.33E-21 T 11-10-2018 IPR008972 Cupredoxin TVD_07560 453563dbe9bb837bdb2a92f69426eca2 341 Pfam PF07732 Multicopper oxidase 75 170 2.3E-14 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 TVD_02060 cfe83b5eca087750b62b62252190c6be 540 SUPERFAMILY SSF56954 2 429 1.18E-56 T 11-10-2018 TVD_02060 cfe83b5eca087750b62b62252190c6be 540 Gene3D G3DSA:1.20.1600.10 36 433 1.0E-52 T 11-10-2018 TVD_02060 cfe83b5eca087750b62b62252190c6be 540 Pfam PF02321 Outer membrane efflux protein 251 426 8.4E-21 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_02060 cfe83b5eca087750b62b62252190c6be 540 Pfam PF02321 Outer membrane efflux protein 51 226 4.1E-18 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_11730 b4edcdd652eb2edf61453651623998ea 160 Gene3D G3DSA:2.40.10.330 71 121 3.3E-58 T 11-10-2018 TVD_11730 b4edcdd652eb2edf61453651623998ea 160 SUPERFAMILY SSF54534 3 140 6.29E-35 T 11-10-2018 TVD_11730 b4edcdd652eb2edf61453651623998ea 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 3.5E-13 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TVD_11730 b4edcdd652eb2edf61453651623998ea 160 Gene3D G3DSA:3.10.50.40 3 154 3.3E-58 T 11-10-2018 TVD_12260 3eabc33e89abe590006662f7ef640317 369 Gene3D G3DSA:2.40.50.140 295 350 4.0E-8 T 11-10-2018 TVD_12260 3eabc33e89abe590006662f7ef640317 369 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_12260 3eabc33e89abe590006662f7ef640317 369 Pfam PF00005 ABC transporter 33 176 2.0E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_12260 3eabc33e89abe590006662f7ef640317 369 SMART SM00382 41 226 1.2E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_12260 3eabc33e89abe590006662f7ef640317 369 SUPERFAMILY SSF52540 17 254 4.46E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_12260 3eabc33e89abe590006662f7ef640317 369 Gene3D G3DSA:2.40.50.940 237 359 4.0E-8 T 11-10-2018 TVD_12260 3eabc33e89abe590006662f7ef640317 369 SUPERFAMILY SSF50331 270 359 3.13E-12 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal TVD_12260 3eabc33e89abe590006662f7ef640317 369 Pfam PF08402 TOBE domain 288 358 2.8E-10 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 TVD_12260 3eabc33e89abe590006662f7ef640317 369 Gene3D G3DSA:3.40.50.300 16 236 8.6E-63 T 11-10-2018 TVD_13455 6a518ced9c3f01e73c77f126e400f0b8 327 Gene3D G3DSA:3.40.50.1820 51 310 6.3E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_13455 6a518ced9c3f01e73c77f126e400f0b8 327 Pfam PF12146 Serine aminopeptidase, S33 60 291 1.7E-39 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 TVD_13455 6a518ced9c3f01e73c77f126e400f0b8 327 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 104 1.4E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TVD_13455 6a518ced9c3f01e73c77f126e400f0b8 327 PRINTS PR00111 Alpha/beta hydrolase fold signature 249 263 1.4E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TVD_13455 6a518ced9c3f01e73c77f126e400f0b8 327 PRINTS PR00111 Alpha/beta hydrolase fold signature 137 150 1.4E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TVD_13455 6a518ced9c3f01e73c77f126e400f0b8 327 SUPERFAMILY SSF53474 56 309 2.28E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_09460 cde551bd20446724b0e2fcbefb953771 110 Gene3D G3DSA:2.40.50.220 1 90 3.4E-28 T 11-10-2018 IPR036677 EutN/Ccml superfamily TVD_09460 cde551bd20446724b0e2fcbefb953771 110 TIGRFAM TIGR02704 carboxysome_B: carboxysome peptide B 1 80 1.2E-40 T 11-10-2018 IPR014077 Carboxysome peptide B TVD_09460 cde551bd20446724b0e2fcbefb953771 110 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 10 71 3.0E-15 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml TVD_09460 cde551bd20446724b0e2fcbefb953771 110 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 77 1.6E-17 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml TVD_09460 cde551bd20446724b0e2fcbefb953771 110 SUPERFAMILY SSF159133 1 84 7.06E-24 T 11-10-2018 IPR036677 EutN/Ccml superfamily TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 Gene3D G3DSA:3.30.390.30 338 462 2.0E-40 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 1.4E-64 T 11-10-2018 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.4E-64 T 11-10-2018 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 1.4E-64 T 11-10-2018 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 1.4E-64 T 11-10-2018 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 1.4E-64 T 11-10-2018 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 1.4E-64 T 11-10-2018 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 1.4E-64 T 11-10-2018 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 1.4E-64 T 11-10-2018 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.4E-64 T 11-10-2018 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 PIRSF PIRSF000350 1 448 4.8E-67 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 Gene3D G3DSA:3.50.50.60 4 321 1.6E-105 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 Gene3D G3DSA:3.50.50.60 143 260 1.6E-105 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 317 1.0E-60 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 2.9E-30 T 11-10-2018 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 2.9E-30 T 11-10-2018 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.9E-30 T 11-10-2018 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 2.9E-30 T 11-10-2018 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 2.9E-30 T 11-10-2018 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 SUPERFAMILY SSF55424 335 450 1.15E-32 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 SUPERFAMILY SSF51905 1 358 1.8E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_04030 81ad78593de00cb72ce1035cf04b8644 464 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 448 1.5E-31 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TVD_09390 fb33be8a1272c4a0dc5a9b38481321b8 691 Pfam PF02321 Outer membrane efflux protein 32 212 4.1E-7 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_09390 fb33be8a1272c4a0dc5a9b38481321b8 691 SUPERFAMILY SSF56954 32 409 4.45E-25 T 11-10-2018 TVD_09390 fb33be8a1272c4a0dc5a9b38481321b8 691 Gene3D G3DSA:1.20.1600.10 20 413 1.3E-20 T 11-10-2018 TVD_02595 840e4bb2c8e3daee551d700a8fc80e46 357 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 5 352 2.0E-112 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 TVD_02595 840e4bb2c8e3daee551d700a8fc80e46 357 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 350 7.9E-68 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 TVD_09910 4efa8d088f8c29a6af6ce5be15182bc6 261 Pfam PF11911 Protein of unknown function (DUF3429) 121 255 2.6E-32 T 11-10-2018 IPR021836 Protein of unknown function DUF3429 TVD_13660 82848e60c601a7c908dd734026d10db6 224 Gene3D G3DSA:3.40.50.150 11 222 1.3E-25 T 11-10-2018 TVD_13660 82848e60c601a7c908dd734026d10db6 224 Pfam PF13489 Methyltransferase domain 36 203 7.2E-14 T 11-10-2018 TVD_13660 82848e60c601a7c908dd734026d10db6 224 SUPERFAMILY SSF53335 13 217 1.08E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_07910 b75eb6762b62a74057ccda228da06832 135 PIRSF PIRSF002889 1 134 2.2E-44 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 TVD_07910 b75eb6762b62a74057ccda228da06832 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TVD_07910 b75eb6762b62a74057ccda228da06832 135 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 132 1.8E-33 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 TVD_07910 b75eb6762b62a74057ccda228da06832 135 Pfam PF00460 Flagella basal body rod protein 17 39 4.8E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TVD_10860 a531b986fc60162a4da15ab31c8534f9 74 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10860 a531b986fc60162a4da15ab31c8534f9 74 SUPERFAMILY SSF46911 3 74 2.22E-29 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10860 a531b986fc60162a4da15ab31c8534f9 74 Pfam PF01084 Ribosomal protein S18 18 68 6.2E-26 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10860 a531b986fc60162a4da15ab31c8534f9 74 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-20 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10860 a531b986fc60162a4da15ab31c8534f9 74 Gene3D G3DSA:4.10.640.10 1 74 1.0E-28 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10860 a531b986fc60162a4da15ab31c8534f9 74 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.654 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10860 a531b986fc60162a4da15ab31c8534f9 74 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 7.1E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10860 a531b986fc60162a4da15ab31c8534f9 74 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 7.1E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10860 a531b986fc60162a4da15ab31c8534f9 74 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 7.1E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10860 a531b986fc60162a4da15ab31c8534f9 74 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 7.1E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10860 a531b986fc60162a4da15ab31c8534f9 74 TIGRFAM TIGR00165 S18: ribosomal protein bS18 6 72 2.9E-35 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_04490 fc8f394c3f99813cd4b2afa4ef61db6f 91 PIRSF PIRSF028784 1 91 1.3E-26 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 TVD_04490 fc8f394c3f99813cd4b2afa4ef61db6f 91 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 83 6.7E-18 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 TVD_10150 3c34f99ae66074578e681caea118501a 242 Gene3D G3DSA:3.40.50.170 5 214 2.5E-81 T 11-10-2018 TVD_10150 3c34f99ae66074578e681caea118501a 242 SUPERFAMILY SSF53328 13 204 2.75E-68 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TVD_10150 3c34f99ae66074578e681caea118501a 242 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 13 200 5.1E-74 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 TVD_10150 3c34f99ae66074578e681caea118501a 242 Pfam PF00551 Formyl transferase 13 193 1.5E-60 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TVD_10150 3c34f99ae66074578e681caea118501a 242 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 14 199 31.081 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 TVD_10150 3c34f99ae66074578e681caea118501a 242 PIRSF PIRSF036480 2 208 7.9E-49 T 11-10-2018 TVD_11345 d759f6bdc1e1c70db24aeaca5bdcf36d 292 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 287 6.2E-88 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 TVD_11345 d759f6bdc1e1c70db24aeaca5bdcf36d 292 Gene3D G3DSA:3.40.50.620 1 180 4.3E-70 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_11345 d759f6bdc1e1c70db24aeaca5bdcf36d 292 Hamap MF_00158 Pantothenate synthetase [panC]. 2 289 36.671 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 TVD_11345 d759f6bdc1e1c70db24aeaca5bdcf36d 292 Gene3D G3DSA:3.30.1300.10 181 287 7.5E-25 T 11-10-2018 TVD_11345 d759f6bdc1e1c70db24aeaca5bdcf36d 292 Pfam PF02569 Pantoate-beta-alanine ligase 3 287 3.7E-96 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 TVD_11345 d759f6bdc1e1c70db24aeaca5bdcf36d 292 SUPERFAMILY SSF52374 1 288 1.93E-92 T 11-10-2018 TVD_01665 8c116fb5c129deeda4cb5d3630803b2d 202 Gene3D G3DSA:3.10.610.10 23 125 8.1E-15 T 11-10-2018 TVD_01665 8c116fb5c129deeda4cb5d3630803b2d 202 SUPERFAMILY SSF54523 26 200 1.41E-18 T 11-10-2018 TVD_01665 8c116fb5c129deeda4cb5d3630803b2d 202 Pfam PF11612 Type II secretion system (T2SS), protein J 44 195 4.9E-17 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 TVD_01065 166a17effc2064212d0b772acccb6b13 285 SUPERFAMILY SSF46689 236 283 3.49E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_01065 166a17effc2064212d0b772acccb6b13 285 SUPERFAMILY SSF46689 187 234 3.18E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_01065 166a17effc2064212d0b772acccb6b13 285 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 278 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TVD_01065 166a17effc2064212d0b772acccb6b13 285 Pfam PF12833 Helix-turn-helix domain 206 283 1.3E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TVD_01065 166a17effc2064212d0b772acccb6b13 285 Gene3D G3DSA:1.10.10.60 187 231 2.7E-13 T 11-10-2018 TVD_01065 166a17effc2064212d0b772acccb6b13 285 SMART SM00342 200 282 5.9E-27 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TVD_01065 166a17effc2064212d0b772acccb6b13 285 Gene3D G3DSA:1.10.10.60 232 285 8.9E-14 T 11-10-2018 TVD_00230 3586ded6849e5ddd9793d4656613c380 326 SUPERFAMILY SSF51735 1 320 1.5E-89 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_00230 3586ded6849e5ddd9793d4656613c380 326 Gene3D G3DSA:3.40.50.720 4 250 2.0E-118 T 11-10-2018 TVD_00230 3586ded6849e5ddd9793d4656613c380 326 Gene3D G3DSA:3.90.25.10 171 304 2.0E-118 T 11-10-2018 TVD_00230 3586ded6849e5ddd9793d4656613c380 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 250 4.2E-56 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TVD_00230 3586ded6849e5ddd9793d4656613c380 326 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 321 1.3E-134 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 TVD_12505 af48ae02b3fea18225cf4cc120ea5db4 267 SUPERFAMILY SSF53474 25 230 7.63E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_12505 af48ae02b3fea18225cf4cc120ea5db4 267 Pfam PF07819 PGAP1-like protein 108 149 2.0E-7 T 11-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 TVD_01605 3c754bd106615d8df52f8b5005f5aec3 462 Gene3D G3DSA:3.40.50.1220 278 461 1.5E-79 T 11-10-2018 TVD_01605 3c754bd106615d8df52f8b5005f5aec3 462 PIRSF PIRSF000204 1 460 8.9E-157 T 11-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 TVD_01605 3c754bd106615d8df52f8b5005f5aec3 462 SUPERFAMILY SSF52467 285 459 3.92E-69 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily TVD_01605 3c754bd106615d8df52f8b5005f5aec3 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 6 456 1.8E-171 T 11-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 TVD_02365 01c77208fd993b94137b21ac42c38a7a 201 SUPERFAMILY SSF52166 10 200 1.57E-63 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 TVD_02365 01c77208fd993b94137b21ac42c38a7a 201 Gene3D G3DSA:3.40.1370.10 1 201 5.2E-60 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 TVD_02365 01c77208fd993b94137b21ac42c38a7a 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 198 4.1E-66 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02365 01c77208fd993b94137b21ac42c38a7a 201 Pfam PF00573 Ribosomal protein L4/L1 family 12 198 4.8E-57 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 TVD_02365 01c77208fd993b94137b21ac42c38a7a 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 4 201 30.257 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_03930 88833b75764f70ce458ee0ed09035411 145 SUPERFAMILY SSF54534 55 126 1.44E-11 T 11-10-2018 TVD_03930 88833b75764f70ce458ee0ed09035411 145 Gene3D G3DSA:3.10.50.30 54 137 7.0E-15 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 TVD_03930 88833b75764f70ce458ee0ed09035411 145 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 57 126 7.3E-13 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 TVD_06340 b05710a8640049011ac6caa206c8ba65 126 SUPERFAMILY SSF52172 1 123 1.22E-36 T 11-10-2018 IPR011006 CheY-like superfamily TVD_06340 b05710a8640049011ac6caa206c8ba65 126 SMART SM00448 1 115 7.6E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_06340 b05710a8640049011ac6caa206c8ba65 126 Gene3D G3DSA:3.40.50.2300 1 122 7.9E-38 T 11-10-2018 TVD_06340 b05710a8640049011ac6caa206c8ba65 126 Pfam PF00072 Response regulator receiver domain 3 115 1.5E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_13705 542b129949f0ad369bb3f4defb5c11a5 122 SUPERFAMILY SSF101386 13 101 5.23E-26 T 11-10-2018 TVD_13705 542b129949f0ad369bb3f4defb5c11a5 122 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 14 97 2.0E-31 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 TVD_13705 542b129949f0ad369bb3f4defb5c11a5 122 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 15 100 5.8E-17 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 TVD_13705 542b129949f0ad369bb3f4defb5c11a5 122 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 11 97 21.678 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 TVD_13705 542b129949f0ad369bb3f4defb5c11a5 122 Gene3D G3DSA:1.10.287.1080 11 103 6.9E-31 T 11-10-2018 TVD_12480 add10d52ca143872de4904639e133479 215 Gene3D G3DSA:2.60.120.10 17 143 8.4E-40 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TVD_12480 add10d52ca143872de4904639e133479 215 SUPERFAMILY SSF51206 17 142 1.31E-33 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like TVD_12480 add10d52ca143872de4904639e133479 215 SMART SM00419 165 213 1.6E-15 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TVD_12480 add10d52ca143872de4904639e133479 215 SMART SM00100 10 127 2.1E-20 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TVD_12480 add10d52ca143872de4904639e133479 215 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 77 94 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site TVD_12480 add10d52ca143872de4904639e133479 215 SUPERFAMILY SSF46785 144 212 2.5E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_12480 add10d52ca143872de4904639e133479 215 ProSitePatterns PS00042 Crp-type HTH domain signature. 173 196 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 TVD_12480 add10d52ca143872de4904639e133479 215 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 171 187 1.4E-7 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TVD_12480 add10d52ca143872de4904639e133479 215 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 187 202 1.4E-7 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TVD_12480 add10d52ca143872de4904639e133479 215 Gene3D G3DSA:1.10.10.10 144 212 2.1E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_12480 add10d52ca143872de4904639e133479 215 Pfam PF00027 Cyclic nucleotide-binding domain 28 115 1.9E-23 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain TVD_12480 add10d52ca143872de4904639e133479 215 Pfam PF00325 Bacterial regulatory proteins, crp family 171 202 7.9E-15 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TVD_13390 c8e841c45cc1e90e45eab27e5c949e80 125 Pfam PF17319 Family of unknown function (DUF5362) 20 110 3.2E-31 T 11-10-2018 IPR035287 Protein of unknown function DUF5362 TVD_06830 2fa5ca727e1def109c9b60e4cc8713fc 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 180 199 6.6E-8 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_06830 2fa5ca727e1def109c9b60e4cc8713fc 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 200 219 6.6E-8 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_06830 2fa5ca727e1def109c9b60e4cc8713fc 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 62 84 6.6E-8 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_06830 2fa5ca727e1def109c9b60e4cc8713fc 260 PIRSF PIRSF006648 4 257 1.1E-25 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_06830 2fa5ca727e1def109c9b60e4cc8713fc 260 Pfam PF01061 ABC-2 type transporter 12 221 6.2E-36 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 TVD_04870 2f5eb2d88de665eb99ec67b2f41532b2 170 Pfam PF02082 Transcriptional regulator 1 83 2.1E-28 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type TVD_04870 2f5eb2d88de665eb99ec67b2f41532b2 170 Gene3D G3DSA:1.10.10.10 1 143 1.0E-51 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_04870 2f5eb2d88de665eb99ec67b2f41532b2 170 SUPERFAMILY SSF46785 2 133 8.24E-36 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_04870 2f5eb2d88de665eb99ec67b2f41532b2 170 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site TVD_04870 2f5eb2d88de665eb99ec67b2f41532b2 170 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.2E-45 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type TVD_07770 3eb732a6be2fd3ef440fdca3bad30f9b 273 SUPERFAMILY SSF51161 2 256 1.05E-75 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily TVD_07770 3eb732a6be2fd3ef440fdca3bad30f9b 273 Gene3D G3DSA:1.10.166.10 1 70 5.0E-30 T 11-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 TVD_07770 3eb732a6be2fd3ef440fdca3bad30f9b 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 TVD_07770 3eb732a6be2fd3ef440fdca3bad30f9b 273 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 7.1E-13 T 11-10-2018 IPR001451 Hexapeptide repeat TVD_07770 3eb732a6be2fd3ef440fdca3bad30f9b 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0017 T 11-10-2018 IPR001451 Hexapeptide repeat TVD_07770 3eb732a6be2fd3ef440fdca3bad30f9b 273 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 272 3.1E-146 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 TVD_07770 3eb732a6be2fd3ef440fdca3bad30f9b 273 Gene3D G3DSA:2.160.10.10 87 257 2.9E-55 T 11-10-2018 TVD_07770 3eb732a6be2fd3ef440fdca3bad30f9b 273 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 69 1.1E-26 T 11-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 TVD_07770 3eb732a6be2fd3ef440fdca3bad30f9b 273 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 56.919 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 TVD_09545 da7a5fe80c13666bbee2eea9144ca744 177 ProSitePatterns PS00213 Lipocalin signature. 34 45 - T 11-10-2018 IPR022272 Lipocalin family conserved site TVD_09545 da7a5fe80c13666bbee2eea9144ca744 177 Pfam PF08212 Lipocalin-like domain 33 173 1.2E-38 T 11-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain TVD_09545 da7a5fe80c13666bbee2eea9144ca744 177 PIRSF PIRSF036893 1 176 5.8E-38 T 11-10-2018 IPR022271 Lipocalin, ApoD type TVD_09545 da7a5fe80c13666bbee2eea9144ca744 177 Gene3D G3DSA:2.40.128.20 19 176 7.9E-39 T 11-10-2018 IPR012674 Calycin TVD_09545 da7a5fe80c13666bbee2eea9144ca744 177 SUPERFAMILY SSF50814 8 174 2.21E-35 T 11-10-2018 IPR012674 Calycin TVD_04150 1a53ffa24d3225bfda0421592716a772 273 Gene3D G3DSA:1.10.3470.10 41 265 7.9E-8 T 11-10-2018 IPR037294 ABC transporter, BtuC-like TVD_04150 1a53ffa24d3225bfda0421592716a772 273 SUPERFAMILY SSF81345 5 259 1.31E-39 T 11-10-2018 IPR037294 ABC transporter, BtuC-like TVD_04150 1a53ffa24d3225bfda0421592716a772 273 Pfam PF00950 ABC 3 transport family 7 259 2.6E-75 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 TVD_02585 972d64d12af087a64db36bedbbe1742a 492 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 183 484 6.5E-127 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TVD_02585 972d64d12af087a64db36bedbbe1742a 492 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 492 36.243 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 TVD_02585 972d64d12af087a64db36bedbbe1742a 492 PRINTS PR00481 Cytosol aminopeptidase signature 260 277 4.6E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TVD_02585 972d64d12af087a64db36bedbbe1742a 492 PRINTS PR00481 Cytosol aminopeptidase signature 369 384 4.6E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TVD_02585 972d64d12af087a64db36bedbbe1742a 492 PRINTS PR00481 Cytosol aminopeptidase signature 319 340 4.6E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TVD_02585 972d64d12af087a64db36bedbbe1742a 492 PRINTS PR00481 Cytosol aminopeptidase signature 282 303 4.6E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TVD_02585 972d64d12af087a64db36bedbbe1742a 492 PRINTS PR00481 Cytosol aminopeptidase signature 341 361 4.6E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TVD_02585 972d64d12af087a64db36bedbbe1742a 492 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 21 144 3.4E-19 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TVD_02585 972d64d12af087a64db36bedbbe1742a 492 SUPERFAMILY SSF52949 1 181 2.94E-30 T 11-10-2018 TVD_02585 972d64d12af087a64db36bedbbe1742a 492 SUPERFAMILY SSF53187 176 490 3.11E-124 T 11-10-2018 TVD_02585 972d64d12af087a64db36bedbbe1742a 492 Gene3D G3DSA:3.40.630.10 178 492 8.6E-139 T 11-10-2018 TVD_02585 972d64d12af087a64db36bedbbe1742a 492 Gene3D G3DSA:3.40.220.10 1 177 3.3E-31 T 11-10-2018 TVD_02585 972d64d12af087a64db36bedbbe1742a 492 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 345 352 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TVD_02515 0840a532259ee74ac4d95d360613259d 171 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 115 125 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site TVD_02515 0840a532259ee74ac4d95d360613259d 171 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 37 145 2.8E-32 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TVD_02515 0840a532259ee74ac4d95d360613259d 171 Pfam PF02130 Uncharacterized protein family UPF0054 27 144 4.9E-30 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TVD_02515 0840a532259ee74ac4d95d360613259d 171 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 149 21.068 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TVD_02515 0840a532259ee74ac4d95d360613259d 171 Gene3D G3DSA:3.40.390.30 2 155 2.6E-42 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 TVD_02515 0840a532259ee74ac4d95d360613259d 171 SUPERFAMILY SSF55486 28 151 3.66E-39 T 11-10-2018 TVD_01375 0d0e1be5dc3c77e4cd70af2f145e9e74 206 SUPERFAMILY SSF52540 15 200 2.09E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01375 0d0e1be5dc3c77e4cd70af2f145e9e74 206 Gene3D G3DSA:3.40.50.300 3 203 8.5E-42 T 11-10-2018 TVD_01375 0d0e1be5dc3c77e4cd70af2f145e9e74 206 SMART SM00382 24 198 2.5E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_01375 0d0e1be5dc3c77e4cd70af2f145e9e74 206 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_01375 0d0e1be5dc3c77e4cd70af2f145e9e74 206 Pfam PF00005 ABC transporter 17 150 3.3E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_00345 e5b43372c3f0b3380e2cb6124d099245 516 TIGRFAM TIGR03109 exosortase_1: exosortase A 24 281 3.1E-100 T 11-10-2018 IPR017540 Exosortase 1 TVD_00345 e5b43372c3f0b3380e2cb6124d099245 516 TIGRFAM TIGR02914 EpsI_fam: EpsI family protein 343 506 1.2E-21 T 11-10-2018 IPR014263 Methanolan biosynthesis EpsI TVD_00345 e5b43372c3f0b3380e2cb6124d099245 516 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 186 278 2.2E-21 T 11-10-2018 IPR026392 Exosortase/Archaeosortase domain TVD_00345 e5b43372c3f0b3380e2cb6124d099245 516 Pfam PF11984 Protein of unknown function (DUF3485) 310 507 1.9E-30 T 11-10-2018 IPR014263 Methanolan biosynthesis EpsI TVD_00345 e5b43372c3f0b3380e2cb6124d099245 516 TIGRFAM TIGR02602 8TM_EpsH: exosortase 44 279 1.5E-75 T 11-10-2018 IPR013426 Exosortase, EpsH-like TVD_00345 e5b43372c3f0b3380e2cb6124d099245 516 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 29 278 7.5E-66 T 11-10-2018 IPR019127 Exosortase TVD_11370 2280db5b3354d0b8f160021c77335903 156 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TVD_11370 2280db5b3354d0b8f160021c77335903 156 Pfam PF00293 NUDIX domain 14 131 4.2E-21 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 TVD_11370 2280db5b3354d0b8f160021c77335903 156 Gene3D G3DSA:3.90.79.10 12 139 1.4E-41 T 11-10-2018 TVD_11370 2280db5b3354d0b8f160021c77335903 156 SUPERFAMILY SSF55811 10 138 9.88E-33 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 TVD_11370 2280db5b3354d0b8f160021c77335903 156 PRINTS PR00502 NUDIX hydrolase family signature 57 72 1.7E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TVD_11370 2280db5b3354d0b8f160021c77335903 156 PRINTS PR00502 NUDIX hydrolase family signature 43 57 1.7E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 TVD_05105 d7bf57ebf064b377b99671a95bf77943 386 Gene3D G3DSA:3.40.640.10 1 259 1.5E-89 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_05105 d7bf57ebf064b377b99671a95bf77943 386 PIRSF PIRSF000390 1 386 6.3E-110 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TVD_05105 d7bf57ebf064b377b99671a95bf77943 386 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 383 4.0E-172 T 11-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase TVD_05105 d7bf57ebf064b377b99671a95bf77943 386 SUPERFAMILY SSF53383 2 384 5.16E-110 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_05105 d7bf57ebf064b377b99671a95bf77943 386 Gene3D G3DSA:3.90.1150.10 260 385 5.7E-35 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_05105 d7bf57ebf064b377b99671a95bf77943 386 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 380 4.2E-110 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase TVD_12005 0fef12a099f1b0e0eeec270c4c1274ca 211 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 8 201 3.5E-61 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like TVD_12005 0fef12a099f1b0e0eeec270c4c1274ca 211 SUPERFAMILY SSF52507 6 202 1.96E-57 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 TVD_12005 0fef12a099f1b0e0eeec270c4c1274ca 211 Gene3D G3DSA:3.40.50.1950 3 206 3.5E-77 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 TVD_12005 0fef12a099f1b0e0eeec270c4c1274ca 211 Pfam PF02441 Flavoprotein 7 182 6.1E-22 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 TVD_12005 0fef12a099f1b0e0eeec270c4c1274ca 211 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 203 36.164 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like TVD_07730 357168ac30411d6ccea58cc510932efe 217 SUPERFAMILY SSF51206 4 109 5.15E-7 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like TVD_07730 357168ac30411d6ccea58cc510932efe 217 SMART SM00419 130 178 0.0017 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TVD_07730 357168ac30411d6ccea58cc510932efe 217 SUPERFAMILY SSF46785 116 190 6.82E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_07730 357168ac30411d6ccea58cc510932efe 217 Pfam PF13545 Crp-like helix-turn-helix domain 118 184 3.0E-13 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TVD_07730 357168ac30411d6ccea58cc510932efe 217 Gene3D G3DSA:1.10.10.10 112 186 8.5E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_05265 47698edb4fdab72502942c260d8fc762 419 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 208 414 7.0E-65 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 TVD_05265 47698edb4fdab72502942c260d8fc762 419 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 80 7.0E-26 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 TVD_06645 0548221b1f1e302dcd46f5484c41ab4b 396 SUPERFAMILY SSF53383 5 394 3.46E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_06645 0548221b1f1e302dcd46f5484c41ab4b 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 TVD_06645 0548221b1f1e302dcd46f5484c41ab4b 396 Gene3D G3DSA:3.90.1150.10 27 388 3.0E-133 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_06645 0548221b1f1e302dcd46f5484c41ab4b 396 Pfam PF00155 Aminotransferase class I and II 33 388 6.1E-80 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TVD_06645 0548221b1f1e302dcd46f5484c41ab4b 396 Gene3D G3DSA:3.40.640.10 64 287 3.0E-133 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_11230 7769320ba7e8e443fb99eb7be340674f 180 Gene3D G3DSA:3.40.50.880 1 180 1.7E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_11230 7769320ba7e8e443fb99eb7be340674f 180 Pfam PF01965 DJ-1/PfpI family 4 163 5.2E-43 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TVD_11230 7769320ba7e8e443fb99eb7be340674f 180 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 174 4.4E-49 T 11-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 TVD_11230 7769320ba7e8e443fb99eb7be340674f 180 SUPERFAMILY SSF52317 1 174 5.35E-50 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_03400 7213e13ad40150f7296ef17eca81a52f 441 Gene3D G3DSA:1.10.10.10 379 436 8.2E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_03400 7213e13ad40150f7296ef17eca81a52f 441 SMART SM01012 376 431 2.1E-22 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 TVD_03400 7213e13ad40150f7296ef17eca81a52f 441 Pfam PF03861 ANTAR domain 379 429 1.2E-17 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 TVD_03400 7213e13ad40150f7296ef17eca81a52f 441 SUPERFAMILY SSF52172 358 429 5.47E-16 T 11-10-2018 IPR011006 CheY-like superfamily TVD_03400 7213e13ad40150f7296ef17eca81a52f 441 Pfam PF08376 Nitrate and nitrite sensing 51 292 9.9E-52 T 11-10-2018 IPR013587 Nitrate/nitrite sensing protein TVD_12410 b7a8cd7caf3595c76c0e9fd82a75b962 275 Gene3D G3DSA:3.40.1260.10 155 274 4.3E-22 T 11-10-2018 IPR027396 DsrEFH-like TVD_12410 b7a8cd7caf3595c76c0e9fd82a75b962 275 SUPERFAMILY SSF75169 158 274 5.18E-12 T 11-10-2018 IPR027396 DsrEFH-like TVD_03985 d88ea7aa1464316d3ae488678f9be03c 245 Gene3D G3DSA:3.30.420.10 50 228 3.7E-37 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TVD_03985 d88ea7aa1464316d3ae488678f9be03c 245 SMART SM00479 54 228 6.7E-26 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TVD_03985 d88ea7aa1464316d3ae488678f9be03c 245 Pfam PF00929 Exonuclease 57 219 3.4E-16 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III TVD_03985 d88ea7aa1464316d3ae488678f9be03c 245 SUPERFAMILY SSF53098 46 227 5.48E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_11960 8518bc05c6aff3bcf264a5f3d7ba7c5a 221 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 192 2.7E-37 T 11-10-2018 TVD_11960 8518bc05c6aff3bcf264a5f3d7ba7c5a 221 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 194 2.7E-22 T 11-10-2018 TVD_11960 8518bc05c6aff3bcf264a5f3d7ba7c5a 221 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 205 5.6E-39 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like TVD_11960 8518bc05c6aff3bcf264a5f3d7ba7c5a 221 Gene3D G3DSA:3.40.50.1000 3 218 5.6E-73 T 11-10-2018 IPR023214 HAD superfamily TVD_11960 8518bc05c6aff3bcf264a5f3d7ba7c5a 221 SUPERFAMILY SSF56784 2 213 1.6E-33 T 11-10-2018 IPR036412 HAD-like superfamily TVD_11960 8518bc05c6aff3bcf264a5f3d7ba7c5a 221 Gene3D G3DSA:1.20.1440.100 15 88 5.6E-73 T 11-10-2018 TVD_04615 f5d476757a52090c870b0311dabaaf77 206 SMART SM01007 12 199 3.1E-38 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal TVD_04615 f5d476757a52090c870b0311dabaaf77 206 Gene3D G3DSA:3.40.225.10 2 201 3.1E-45 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TVD_04615 f5d476757a52090c870b0311dabaaf77 206 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 206 75.988 T 11-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 TVD_04615 f5d476757a52090c870b0311dabaaf77 206 SUPERFAMILY SSF53639 8 204 3.14E-42 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TVD_04615 f5d476757a52090c870b0311dabaaf77 206 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 14 203 5.5E-56 T 11-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 TVD_04615 f5d476757a52090c870b0311dabaaf77 206 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 13 198 5.3E-38 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal TVD_02205 7679150af67a78b29be35bc77155cca5 411 Gene3D G3DSA:3.30.1490.110 88 170 2.9E-124 T 11-10-2018 TVD_02205 7679150af67a78b29be35bc77155cca5 411 SUPERFAMILY SSF53067 200 379 6.41E-50 T 11-10-2018 TVD_02205 7679150af67a78b29be35bc77155cca5 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 10 379 8.1E-157 T 11-10-2018 IPR020823 Cell division protein FtsA TVD_02205 7679150af67a78b29be35bc77155cca5 411 Pfam PF02491 SHS2 domain inserted in FTSA 86 163 3.2E-33 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 TVD_02205 7679150af67a78b29be35bc77155cca5 411 Gene3D G3DSA:3.30.420.40 14 372 2.9E-124 T 11-10-2018 TVD_02205 7679150af67a78b29be35bc77155cca5 411 Pfam PF14450 Cell division protein FtsA 12 188 9.4E-12 T 11-10-2018 TVD_02205 7679150af67a78b29be35bc77155cca5 411 Pfam PF14450 Cell division protein FtsA 208 375 1.6E-23 T 11-10-2018 TVD_02205 7679150af67a78b29be35bc77155cca5 411 Gene3D G3DSA:3.90.640.10 236 301 2.9E-124 T 11-10-2018 TVD_02205 7679150af67a78b29be35bc77155cca5 411 SUPERFAMILY SSF53067 10 198 9.07E-63 T 11-10-2018 TVD_02205 7679150af67a78b29be35bc77155cca5 411 Gene3D G3DSA:3.30.420.40 198 353 2.9E-124 T 11-10-2018 TVD_02205 7679150af67a78b29be35bc77155cca5 411 PIRSF PIRSF003101 2 411 3.8E-159 T 11-10-2018 IPR020823 Cell division protein FtsA TVD_02205 7679150af67a78b29be35bc77155cca5 411 SMART SM00842 11 197 2.7E-107 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 TVD_02205 7679150af67a78b29be35bc77155cca5 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 7 411 32.055 T 11-10-2018 IPR020823 Cell division protein FtsA TVD_02415 da926e5fedda5c1e2ec4d355e003f3be 104 SUPERFAMILY SSF50104 3 101 1.65E-31 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily TVD_02415 da926e5fedda5c1e2ec4d355e003f3be 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02415 da926e5fedda5c1e2ec4d355e003f3be 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 101 2.3E-26 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02415 da926e5fedda5c1e2ec4d355e003f3be 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 96 20.587 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02415 da926e5fedda5c1e2ec4d355e003f3be 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 102 1.9E-37 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02415 da926e5fedda5c1e2ec4d355e003f3be 104 SMART SM00739 3 30 3.5E-4 T 11-10-2018 IPR005824 KOW TVD_02415 da926e5fedda5c1e2ec4d355e003f3be 104 Gene3D G3DSA:2.30.30.30 1 103 2.5E-36 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 TVD_02415 da926e5fedda5c1e2ec4d355e003f3be 104 Pfam PF00467 KOW motif 6 34 2.7E-6 T 11-10-2018 IPR005824 KOW TVD_07100 0cf78a28f19f466e182ba0fd81dee9ba 257 SUPERFAMILY SSF55469 31 232 4.97E-53 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TVD_07100 0cf78a28f19f466e182ba0fd81dee9ba 257 Gene3D G3DSA:3.40.109.10 11 206 3.6E-48 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 TVD_07100 0cf78a28f19f466e182ba0fd81dee9ba 257 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 23 224 4.6E-80 T 11-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 TVD_07100 0cf78a28f19f466e182ba0fd81dee9ba 257 Pfam PF00881 Nitroreductase family 35 199 1.3E-29 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 TVD_07735 8ecedc94b274543d0cf9a663616e67df 106 Gene3D G3DSA:3.40.250.10 1 98 4.8E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_07735 8ecedc94b274543d0cf9a663616e67df 106 SUPERFAMILY SSF52821 2 104 1.7E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_07735 8ecedc94b274543d0cf9a663616e67df 106 SMART SM00450 6 101 8.0E-23 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_07735 8ecedc94b274543d0cf9a663616e67df 106 Pfam PF00581 Rhodanese-like domain 6 97 1.3E-15 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_12755 815b6fde3f59642023ecfa54bda509ec 406 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 TVD_12755 815b6fde3f59642023ecfa54bda509ec 406 Gene3D G3DSA:3.40.50.720 161 406 9.4E-82 T 11-10-2018 TVD_12755 815b6fde3f59642023ecfa54bda509ec 406 SUPERFAMILY SSF51735 163 405 8.77E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_12755 815b6fde3f59642023ecfa54bda509ec 406 Pfam PF00390 Malic enzyme, N-terminal domain 20 150 5.8E-26 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TVD_12755 815b6fde3f59642023ecfa54bda509ec 406 PIRSF PIRSF000106 45 405 2.4E-70 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 TVD_12755 815b6fde3f59642023ecfa54bda509ec 406 SUPERFAMILY SSF53223 11 161 3.38E-51 T 11-10-2018 TVD_12755 815b6fde3f59642023ecfa54bda509ec 406 SMART SM00919 163 399 4.9E-140 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 TVD_12755 815b6fde3f59642023ecfa54bda509ec 406 Gene3D G3DSA:3.40.50.10380 1 160 1.4E-67 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 TVD_12755 815b6fde3f59642023ecfa54bda509ec 406 Pfam PF03949 Malic enzyme, NAD binding domain 165 355 5.4E-30 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 TVD_12755 815b6fde3f59642023ecfa54bda509ec 406 SMART SM01274 18 151 6.9E-76 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TVD_04995 5519edf53f04b38ee0e67347846e91c2 494 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 19 257 2.9E-19 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 TVD_04995 5519edf53f04b38ee0e67347846e91c2 494 Gene3D G3DSA:3.40.50.300 17 257 1.4E-56 T 11-10-2018 TVD_04995 5519edf53f04b38ee0e67347846e91c2 494 SUPERFAMILY SSF52540 18 262 2.41E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_11245 fc80e8c9d33aab109bfdf67b249ad922 111 SMART SM00418 28 106 3.7E-25 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_11245 fc80e8c9d33aab109bfdf67b249ad922 111 Gene3D G3DSA:1.10.10.10 9 109 2.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_11245 fc80e8c9d33aab109bfdf67b249ad922 111 Pfam PF01022 Bacterial regulatory protein, arsR family 35 79 2.0E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_11245 fc80e8c9d33aab109bfdf67b249ad922 111 SUPERFAMILY SSF46785 17 109 8.35E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_11245 fc80e8c9d33aab109bfdf67b249ad922 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 7.5E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_11245 fc80e8c9d33aab109bfdf67b249ad922 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 77 92 7.5E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_11245 fc80e8c9d33aab109bfdf67b249ad922 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 45 7.5E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_11245 fc80e8c9d33aab109bfdf67b249ad922 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 60 7.5E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_02065 e006808693893676d5aae891c4e4fb5a 466 Pfam PF07731 Multicopper oxidase 225 322 1.3E-18 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 TVD_02065 e006808693893676d5aae891c4e4fb5a 466 Pfam PF07732 Multicopper oxidase 77 186 2.5E-39 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 TVD_02065 e006808693893676d5aae891c4e4fb5a 466 Gene3D G3DSA:2.60.40.420 66 188 4.2E-77 T 11-10-2018 IPR008972 Cupredoxin TVD_02065 e006808693893676d5aae891c4e4fb5a 466 SUPERFAMILY SSF49503 169 318 2.39E-31 T 11-10-2018 IPR008972 Cupredoxin TVD_02065 e006808693893676d5aae891c4e4fb5a 466 SUPERFAMILY SSF49503 51 188 1.66E-39 T 11-10-2018 IPR008972 Cupredoxin TVD_02065 e006808693893676d5aae891c4e4fb5a 466 Gene3D G3DSA:2.60.40.420 189 320 4.2E-77 T 11-10-2018 IPR008972 Cupredoxin TVD_12645 ef66d7bb80fee8b150d2f51123488197 345 Gene3D G3DSA:3.10.520.20 19 331 8.2E-76 T 11-10-2018 TVD_12645 ef66d7bb80fee8b150d2f51123488197 345 PIRSF PIRSF006268 1 331 2.7E-61 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 TVD_12645 ef66d7bb80fee8b150d2f51123488197 345 Pfam PF02424 ApbE family 36 309 8.1E-66 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 TVD_12645 ef66d7bb80fee8b150d2f51123488197 345 SUPERFAMILY SSF143631 31 327 5.67E-67 T 11-10-2018 IPR003374 ApbE-like superfamily TVD_03125 3522b424737d717d1e843784175d78ff 358 Pfam PF03773 Predicted permease 4 300 9.1E-42 T 11-10-2018 IPR005524 Predicted permease DUF318 TVD_02625 09555be27923e73094f0cb4f77e3e734 198 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 11 198 26.643 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 TVD_02625 09555be27923e73094f0cb4f77e3e734 198 Pfam PF12804 MobA-like NTP transferase domain 15 159 3.8E-31 T 11-10-2018 IPR025877 MobA-like NTP transferase TVD_02625 09555be27923e73094f0cb4f77e3e734 198 SUPERFAMILY SSF53448 13 195 1.43E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_02625 09555be27923e73094f0cb4f77e3e734 198 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 14 195 1.4E-59 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 TVD_02625 09555be27923e73094f0cb4f77e3e734 198 Gene3D G3DSA:3.90.550.10 10 198 1.7E-53 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_07705 ba3b1b86f0dfc5cd502444ffa1a7211e 104 Pfam PF04972 BON domain 37 103 3.9E-22 T 11-10-2018 IPR007055 BON domain TVD_07705 ba3b1b86f0dfc5cd502444ffa1a7211e 104 SMART SM00749 42 104 2.3E-6 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria TVD_08055 9fb7da978bbd6c0ba29d456d3496c7c7 112 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 5 106 1.5E-26 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 TVD_08055 9fb7da978bbd6c0ba29d456d3496c7c7 112 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 7 90 1.1E-8 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08055 9fb7da978bbd6c0ba29d456d3496c7c7 112 Gene3D G3DSA:1.20.1300.10 3 108 2.5E-24 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08055 9fb7da978bbd6c0ba29d456d3496c7c7 112 SUPERFAMILY SSF81343 5 107 1.02E-21 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08055 9fb7da978bbd6c0ba29d456d3496c7c7 112 PIRSF PIRSF000169 2 109 1.9E-22 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 TVD_02425 4f485096ac38a69fc2a1cea2d58d0f6c 101 Gene3D G3DSA:4.10.830.10 40 101 5.4E-22 T 11-10-2018 TVD_02425 4f485096ac38a69fc2a1cea2d58d0f6c 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 8.9E-24 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02425 4f485096ac38a69fc2a1cea2d58d0f6c 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.086 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid TVD_02425 4f485096ac38a69fc2a1cea2d58d0f6c 101 SUPERFAMILY SSF57716 2 101 7.06E-36 T 11-10-2018 TVD_01920 f9225bcd43ff30b254b12b0ebce5ea66 366 Pfam PF00296 Luciferase-like monooxygenase 13 323 2.7E-60 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 TVD_01920 f9225bcd43ff30b254b12b0ebce5ea66 366 Gene3D G3DSA:3.20.20.30 1 356 1.2E-100 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 TVD_01920 f9225bcd43ff30b254b12b0ebce5ea66 366 SUPERFAMILY SSF51679 1 353 1.13E-85 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 TVD_03905 d367e512d92ad39a2abdc3bbb5dc8229 139 SMART SM00450 12 139 7.6E-12 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_03905 d367e512d92ad39a2abdc3bbb5dc8229 139 Pfam PF00581 Rhodanese-like domain 20 135 1.0E-8 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_03905 d367e512d92ad39a2abdc3bbb5dc8229 139 Gene3D G3DSA:3.40.250.10 1 139 4.0E-18 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_03905 d367e512d92ad39a2abdc3bbb5dc8229 139 SUPERFAMILY SSF52821 11 137 5.24E-17 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_08710 12761420335870781352bb87f4fdea5f 167 Gene3D G3DSA:2.40.70.10 16 146 1.5E-31 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily TVD_08710 12761420335870781352bb87f4fdea5f 167 Pfam PF05618 Putative ATP-dependant zinc protease 19 154 5.0E-35 T 11-10-2018 TVD_08710 12761420335870781352bb87f4fdea5f 167 SUPERFAMILY SSF50630 19 153 2.81E-43 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily TVD_06460 cf1c6acfe3f7d5bebef996a5475197b9 240 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_06460 cf1c6acfe3f7d5bebef996a5475197b9 240 Pfam PF00005 ABC transporter 28 176 2.2E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_06460 cf1c6acfe3f7d5bebef996a5475197b9 240 SUPERFAMILY SSF52540 9 227 5.97E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06460 cf1c6acfe3f7d5bebef996a5475197b9 240 SMART SM00382 37 225 1.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_06460 cf1c6acfe3f7d5bebef996a5475197b9 240 Gene3D G3DSA:3.40.50.300 7 237 1.4E-61 T 11-10-2018 TVD_08995 1ba6bc7506cb6944eab88bce6dddbb52 325 SUPERFAMILY SSF103088 214 321 1.7E-32 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_08995 1ba6bc7506cb6944eab88bce6dddbb52 325 PRINTS PR01021 OMPA domain signature 221 243 2.1E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TVD_08995 1ba6bc7506cb6944eab88bce6dddbb52 325 PRINTS PR01021 OMPA domain signature 266 282 2.1E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TVD_08995 1ba6bc7506cb6944eab88bce6dddbb52 325 PRINTS PR01021 OMPA domain signature 251 266 2.1E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TVD_08995 1ba6bc7506cb6944eab88bce6dddbb52 325 Pfam PF00691 OmpA family 220 316 9.9E-20 T 11-10-2018 IPR006665 OmpA-like domain TVD_08995 1ba6bc7506cb6944eab88bce6dddbb52 325 Gene3D G3DSA:3.30.1330.60 190 323 2.0E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_13185 d83fbdaddd017e2fbad8fc6b1cbe40c3 336 SUPERFAMILY SSF48452 203 299 4.43E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_13185 d83fbdaddd017e2fbad8fc6b1cbe40c3 336 Pfam PF13529 Peptidase_C39 like family 50 157 1.4E-8 T 11-10-2018 IPR039564 Peptidase C39-like TVD_13185 d83fbdaddd017e2fbad8fc6b1cbe40c3 336 Gene3D G3DSA:1.25.40.10 204 323 8.9E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_13185 d83fbdaddd017e2fbad8fc6b1cbe40c3 336 Gene3D G3DSA:3.90.70.10 55 200 5.7E-11 T 11-10-2018 TVD_13475 47023fc652ba8bda89207e0599932951 172 Pfam PF04011 LemA family 8 147 7.0E-7 T 11-10-2018 IPR007156 LemA TVD_13475 47023fc652ba8bda89207e0599932951 172 SUPERFAMILY SSF140478 27 162 2.62E-6 T 11-10-2018 IPR023353 LemA-like domain superfamily TVD_01295 63d16e6f377cfa74082bbd269f64535f 192 Pfam PF14334 Domain of unknown function (DUF4390) 30 190 1.9E-27 T 11-10-2018 IPR025500 Protein of unknown function DUF4390 TVD_10595 6f2aea0d7fd202ef5a1f8db74bf44a17 360 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 138 153 2.5E-10 T 11-10-2018 TVD_10595 6f2aea0d7fd202ef5a1f8db74bf44a17 360 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 2.5E-10 T 11-10-2018 TVD_10595 6f2aea0d7fd202ef5a1f8db74bf44a17 360 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 256 271 2.5E-10 T 11-10-2018 TVD_10595 6f2aea0d7fd202ef5a1f8db74bf44a17 360 SUPERFAMILY SSF51905 6 313 3.59E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_10595 6f2aea0d7fd202ef5a1f8db74bf44a17 360 Gene3D G3DSA:3.50.50.60 4 340 5.3E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_10595 6f2aea0d7fd202ef5a1f8db74bf44a17 360 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 151 4.2E-6 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TVD_10595 6f2aea0d7fd202ef5a1f8db74bf44a17 360 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 7 291 9.4E-58 T 11-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 TVD_02360 30a7ca1f4170a7b0cbbafc89f8d6ac73 214 SUPERFAMILY SSF50447 2 212 9.71E-81 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TVD_02360 30a7ca1f4170a7b0cbbafc89f8d6ac73 214 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site TVD_02360 30a7ca1f4170a7b0cbbafc89f8d6ac73 214 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 3.0E-88 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02360 30a7ca1f4170a7b0cbbafc89f8d6ac73 214 Gene3D G3DSA:2.40.30.10 133 213 3.4E-17 T 11-10-2018 TVD_02360 30a7ca1f4170a7b0cbbafc89f8d6ac73 214 Pfam PF00297 Ribosomal protein L3 102 185 5.8E-17 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02360 30a7ca1f4170a7b0cbbafc89f8d6ac73 214 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.98 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02360 30a7ca1f4170a7b0cbbafc89f8d6ac73 214 Gene3D G3DSA:2.40.50.620 32 96 3.5E-17 T 11-10-2018 TVD_12245 2597d3e4454489d3e113b1b01c0f2203 975 Pfam PF08335 GlnD PII-uridylyltransferase 846 934 6.7E-9 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 TVD_12245 2597d3e4454489d3e113b1b01c0f2203 975 Pfam PF08335 GlnD PII-uridylyltransferase 306 445 3.2E-42 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 TVD_12245 2597d3e4454489d3e113b1b01c0f2203 975 SUPERFAMILY SSF81593 834 965 2.67E-29 T 11-10-2018 TVD_12245 2597d3e4454489d3e113b1b01c0f2203 975 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 36 966 19.308 T 11-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 TVD_12245 2597d3e4454489d3e113b1b01c0f2203 975 Gene3D G3DSA:1.20.120.1510 465 577 1.0E-30 T 11-10-2018 TVD_12245 2597d3e4454489d3e113b1b01c0f2203 975 SUPERFAMILY SSF81301 29 295 3.05E-78 T 11-10-2018 TVD_12245 2597d3e4454489d3e113b1b01c0f2203 975 Gene3D G3DSA:1.20.120.330 831 966 2.9E-38 T 11-10-2018 TVD_12245 2597d3e4454489d3e113b1b01c0f2203 975 Gene3D G3DSA:3.30.460.100 48 289 2.7E-78 T 11-10-2018 TVD_12245 2597d3e4454489d3e113b1b01c0f2203 975 Gene3D G3DSA:3.30.460.100 578 830 8.3E-92 T 11-10-2018 TVD_12245 2597d3e4454489d3e113b1b01c0f2203 975 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 45 284 4.1E-79 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 TVD_12245 2597d3e4454489d3e113b1b01c0f2203 975 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 569 824 4.4E-85 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 TVD_12245 2597d3e4454489d3e113b1b01c0f2203 975 SUPERFAMILY SSF81301 541 833 1.53E-84 T 11-10-2018 TVD_12245 2597d3e4454489d3e113b1b01c0f2203 975 SUPERFAMILY SSF81593 296 445 1.88E-39 T 11-10-2018 TVD_12245 2597d3e4454489d3e113b1b01c0f2203 975 Gene3D G3DSA:1.20.120.330 294 448 5.8E-50 T 11-10-2018 TVD_10010 a2054ee1cb2f58caa9fcc87033ab71b9 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.731 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_10010 a2054ee1cb2f58caa9fcc87033ab71b9 246 SUPERFAMILY SSF75625 3 243 8.89E-98 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_10010 a2054ee1cb2f58caa9fcc87033ab71b9 246 Pfam PF01709 Transcriptional regulator 5 237 1.2E-95 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_10010 a2054ee1cb2f58caa9fcc87033ab71b9 246 Gene3D G3DSA:3.30.70.980 130 205 6.7E-55 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_10010 a2054ee1cb2f58caa9fcc87033ab71b9 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 9.3E-101 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_10010 a2054ee1cb2f58caa9fcc87033ab71b9 246 Gene3D G3DSA:3.30.70.980 86 236 6.7E-55 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_10010 a2054ee1cb2f58caa9fcc87033ab71b9 246 Gene3D G3DSA:1.10.10.200 1 81 1.2E-35 T 11-10-2018 IPR017856 Integrase-like, N-terminal TVD_10310 77711019aea3b5b39917ce3430d41d53 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.2E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_10310 77711019aea3b5b39917ce3430d41d53 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.2E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_10310 77711019aea3b5b39917ce3430d41d53 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.2E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_10310 77711019aea3b5b39917ce3430d41d53 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.2E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_10310 77711019aea3b5b39917ce3430d41d53 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.2E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_10310 77711019aea3b5b39917ce3430d41d53 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 3.6E-84 T 11-10-2018 TVD_10310 77711019aea3b5b39917ce3430d41d53 266 SUPERFAMILY SSF51735 5 255 7.93E-63 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_10310 77711019aea3b5b39917ce3430d41d53 266 Gene3D G3DSA:3.40.50.720 1 263 2.4E-55 T 11-10-2018 TVD_10310 77711019aea3b5b39917ce3430d41d53 266 PIRSF PIRSF000094 1 261 2.8E-114 T 11-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TVD_13040 5784cf23d90faf6f7bd426a8610ad530 689 Pfam PF05140 ResB-like family 37 662 5.6E-142 T 11-10-2018 IPR007816 ResB-like domain TVD_12300 d293b0d0dc28c06b68386743e0ac45cb 179 Pfam PF13098 Thioredoxin-like domain 53 154 5.2E-17 T 11-10-2018 IPR012336 Thioredoxin-like fold TVD_12300 d293b0d0dc28c06b68386743e0ac45cb 179 SUPERFAMILY SSF52833 39 171 9.46E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_12300 d293b0d0dc28c06b68386743e0ac45cb 179 Gene3D G3DSA:3.40.30.10 36 178 1.3E-26 T 11-10-2018 TVD_03755 b177b2dc9719ea880f1bd220675a61a2 384 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 219 377 1.2E-41 T 11-10-2018 IPR000160 GGDEF domain TVD_03755 b177b2dc9719ea880f1bd220675a61a2 384 Gene3D G3DSA:3.30.70.270 216 382 3.2E-50 T 11-10-2018 TVD_03755 b177b2dc9719ea880f1bd220675a61a2 384 SUPERFAMILY SSF55073 226 378 1.1E-41 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_03755 b177b2dc9719ea880f1bd220675a61a2 384 SMART SM00267 210 380 7.3E-47 T 11-10-2018 IPR000160 GGDEF domain TVD_03755 b177b2dc9719ea880f1bd220675a61a2 384 Pfam PF00990 Diguanylate cyclase, GGDEF domain 222 375 7.0E-39 T 11-10-2018 IPR000160 GGDEF domain TVD_11085 a4ad5093ced7f7d9f192d7069c23972a 352 SUPERFAMILY SSF53659 19 341 2.88E-107 T 11-10-2018 TVD_11085 a4ad5093ced7f7d9f192d7069c23972a 352 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 21 340 3.2E-124 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 TVD_11085 a4ad5093ced7f7d9f192d7069c23972a 352 Gene3D G3DSA:3.40.718.10 17 343 1.8E-119 T 11-10-2018 TVD_11085 a4ad5093ced7f7d9f192d7069c23972a 352 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 47 336 5.6E-105 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 TVD_11085 a4ad5093ced7f7d9f192d7069c23972a 352 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 19 343 36.088 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 TVD_00555 095d35fd27ee531a91a1d4b4dfcb7bb0 316 Pfam PF02401 LytB protein 7 285 6.0E-93 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TVD_00555 095d35fd27ee531a91a1d4b4dfcb7bb0 316 Gene3D G3DSA:3.40.1010.20 99 199 3.5E-112 T 11-10-2018 TVD_00555 095d35fd27ee531a91a1d4b4dfcb7bb0 316 Gene3D G3DSA:3.40.50.11270 14 98 3.5E-112 T 11-10-2018 TVD_00555 095d35fd27ee531a91a1d4b4dfcb7bb0 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 7 286 3.4E-102 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TVD_00555 095d35fd27ee531a91a1d4b4dfcb7bb0 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 3 289 38.34 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 TVD_00555 095d35fd27ee531a91a1d4b4dfcb7bb0 316 Gene3D G3DSA:3.40.1010.20 8 285 3.5E-112 T 11-10-2018 TVD_09520 89393fe56a35b9f3545f026319be95c1 269 SUPERFAMILY SSF52540 1 268 1.86E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_09520 89393fe56a35b9f3545f026319be95c1 269 PIRSF PIRSF003092 1 269 1.5E-92 T 11-10-2018 IPR025501 ATP binding protein MinD TVD_09520 89393fe56a35b9f3545f026319be95c1 269 Gene3D G3DSA:3.40.50.300 1 259 2.7E-73 T 11-10-2018 TVD_09520 89393fe56a35b9f3545f026319be95c1 269 Pfam PF13614 AAA domain 3 161 1.2E-20 T 11-10-2018 IPR025669 AAA domain TVD_09520 89393fe56a35b9f3545f026319be95c1 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 267 3.3E-110 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 TVD_09440 ec250a0bf8774892d21cb2bbaca3274e 140 PRINTS PR00601 Bacterioferritin signature 43 63 1.1E-16 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TVD_09440 ec250a0bf8774892d21cb2bbaca3274e 140 PRINTS PR00601 Bacterioferritin signature 2 21 1.1E-16 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TVD_09440 ec250a0bf8774892d21cb2bbaca3274e 140 PRINTS PR00601 Bacterioferritin signature 106 126 1.1E-16 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TVD_09440 ec250a0bf8774892d21cb2bbaca3274e 140 PRINTS PR00601 Bacterioferritin signature 22 42 1.1E-16 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TVD_09440 ec250a0bf8774892d21cb2bbaca3274e 140 PRINTS PR00601 Bacterioferritin signature 64 84 1.1E-16 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TVD_09440 ec250a0bf8774892d21cb2bbaca3274e 140 PIRSF PIRSF002560 1 139 2.5E-27 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TVD_09440 ec250a0bf8774892d21cb2bbaca3274e 140 Pfam PF00210 Ferritin-like domain 9 136 3.0E-20 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 TVD_09440 ec250a0bf8774892d21cb2bbaca3274e 140 SUPERFAMILY SSF47240 1 136 6.94E-31 T 11-10-2018 IPR009078 Ferritin-like superfamily TVD_09440 ec250a0bf8774892d21cb2bbaca3274e 140 Gene3D G3DSA:1.20.1260.10 1 139 2.0E-37 T 11-10-2018 IPR012347 Ferritin-like TVD_10870 d893a65f5734052f0be0122d74e088a6 258 SUPERFAMILY SSF55315 12 84 6.83E-11 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like TVD_10870 d893a65f5734052f0be0122d74e088a6 258 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 15 85 2.2E-10 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TVD_10870 d893a65f5734052f0be0122d74e088a6 258 Pfam PF00588 SpoU rRNA Methylase family 103 242 9.8E-39 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TVD_10870 d893a65f5734052f0be0122d74e088a6 258 SUPERFAMILY SSF75217 78 250 1.11E-47 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TVD_10870 d893a65f5734052f0be0122d74e088a6 258 SMART SM00967 12 88 1.1E-7 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 TVD_10870 d893a65f5734052f0be0122d74e088a6 258 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 14 249 1.5E-64 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 TVD_10870 d893a65f5734052f0be0122d74e088a6 258 Gene3D G3DSA:3.30.1330.30 4 84 3.8E-15 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like TVD_10870 d893a65f5734052f0be0122d74e088a6 258 Gene3D G3DSA:3.40.1280.10 89 250 1.4E-57 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TVD_08755 ec85ff08e9612b1b5e710d085b4d6b59 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 67 7.8E-13 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 TVD_08755 ec85ff08e9612b1b5e710d085b4d6b59 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 9.9E-6 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria TVD_08755 ec85ff08e9612b1b5e710d085b4d6b59 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 9.9E-6 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria TVD_08755 ec85ff08e9612b1b5e710d085b4d6b59 88 SUPERFAMILY SSF57716 39 71 9.41E-8 T 11-10-2018 TVD_08755 ec85ff08e9612b1b5e710d085b4d6b59 88 Gene3D G3DSA:1.20.120.910 1 73 1.4E-22 T 11-10-2018 TVD_08755 ec85ff08e9612b1b5e710d085b4d6b59 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site TVD_10800 eaed78ccc8be30bfb0c17c936eb023ce 476 PRINTS PR00987 Glutamyl-tRNA synthetase signature 26 37 1.2E-19 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TVD_10800 eaed78ccc8be30bfb0c17c936eb023ce 476 PRINTS PR00987 Glutamyl-tRNA synthetase signature 41 54 1.2E-19 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TVD_10800 eaed78ccc8be30bfb0c17c936eb023ce 476 PRINTS PR00987 Glutamyl-tRNA synthetase signature 214 222 1.2E-19 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TVD_10800 eaed78ccc8be30bfb0c17c936eb023ce 476 PRINTS PR00987 Glutamyl-tRNA synthetase signature 12 24 1.2E-19 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TVD_10800 eaed78ccc8be30bfb0c17c936eb023ce 476 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 208 1.2E-19 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 TVD_10800 eaed78ccc8be30bfb0c17c936eb023ce 476 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 8 471 28.621 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TVD_10800 eaed78ccc8be30bfb0c17c936eb023ce 476 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_10800 eaed78ccc8be30bfb0c17c936eb023ce 476 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 9 468 2.2E-128 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TVD_10800 eaed78ccc8be30bfb0c17c936eb023ce 476 SUPERFAMILY SSF48163 318 470 6.8E-26 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TVD_10800 eaed78ccc8be30bfb0c17c936eb023ce 476 SUPERFAMILY SSF52374 9 315 1.29E-105 T 11-10-2018 TVD_10800 eaed78ccc8be30bfb0c17c936eb023ce 476 Gene3D G3DSA:1.10.10.350 387 475 4.3E-17 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 TVD_10800 eaed78ccc8be30bfb0c17c936eb023ce 476 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 323 5.6E-86 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 TVD_10800 eaed78ccc8be30bfb0c17c936eb023ce 476 Gene3D G3DSA:3.40.50.620 2 332 7.6E-125 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_09500 c99c1b21b57d49a118586d17d4170a39 253 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 4.5E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TVD_09500 c99c1b21b57d49a118586d17d4170a39 253 Gene3D G3DSA:1.10.357.10 66 213 1.4E-7 T 11-10-2018 TVD_09500 c99c1b21b57d49a118586d17d4170a39 253 SUPERFAMILY SSF46689 10 85 9.75E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 TVD_09500 c99c1b21b57d49a118586d17d4170a39 253 Gene3D G3DSA:1.10.10.60 16 65 3.7E-13 T 11-10-2018 TVD_03545 c11b86411d1c26df11d8a817a37b7a0d 99 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 4.2E-22 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 TVD_03545 c11b86411d1c26df11d8a817a37b7a0d 99 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 90 1.0E-10 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 TVD_03545 c11b86411d1c26df11d8a817a37b7a0d 99 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 96 8.5E-24 T 11-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 TVD_03545 c11b86411d1c26df11d8a817a37b7a0d 99 SMART SM01103 3 86 3.3E-37 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 TVD_03545 c11b86411d1c26df11d8a817a37b7a0d 99 Gene3D G3DSA:3.30.110.60 1 98 3.0E-30 T 11-10-2018 IPR035920 YhbY-like superfamily TVD_03545 c11b86411d1c26df11d8a817a37b7a0d 99 SUPERFAMILY SSF75471 2 94 2.75E-28 T 11-10-2018 IPR035920 YhbY-like superfamily TVD_09075 4b8b8f0c82fa855e314a328026540358 259 Pfam PF08378 Nuclease-related domain 35 147 9.3E-28 T 11-10-2018 IPR011528 Nuclease-related domain, NERD TVD_09075 4b8b8f0c82fa855e314a328026540358 259 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 220 258 2.4E-9 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 TVD_09075 4b8b8f0c82fa855e314a328026540358 259 SUPERFAMILY SSF57783 207 258 3.57E-7 T 11-10-2018 TVD_08865 8e556e6fe48594acfad29fc311d99927 247 Pfam PF08241 Methyltransferase domain 71 136 3.6E-10 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TVD_08865 8e556e6fe48594acfad29fc311d99927 247 Gene3D G3DSA:3.40.50.150 25 193 1.1E-21 T 11-10-2018 TVD_08865 8e556e6fe48594acfad29fc311d99927 247 SUPERFAMILY SSF53335 50 190 5.05E-22 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_07365 1e6f70d5365e0e1c872314c4c499608a 448 Pfam PF01593 Flavin containing amine oxidoreductase 18 440 1.2E-32 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 TVD_07365 1e6f70d5365e0e1c872314c4c499608a 448 SUPERFAMILY SSF51905 8 441 2.12E-47 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_07365 1e6f70d5365e0e1c872314c4c499608a 448 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 11 442 2.5E-105 T 11-10-2018 IPR017830 Hydroxysqualene dehydroxylase HpnE MetaCyc: PWY-7072 TVD_07365 1e6f70d5365e0e1c872314c4c499608a 448 Gene3D G3DSA:3.50.50.60 5 447 1.1E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_07340 9010892194ce681b21d9e1ab3de2de96 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 185 4.2E-29 T 11-10-2018 TVD_07340 9010892194ce681b21d9e1ab3de2de96 229 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 8 205 4.2E-54 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 TVD_07340 9010892194ce681b21d9e1ab3de2de96 229 SUPERFAMILY SSF56784 8 216 3.25E-51 T 11-10-2018 IPR036412 HAD-like superfamily TVD_07340 9010892194ce681b21d9e1ab3de2de96 229 Gene3D G3DSA:3.40.50.1000 8 194 2.7E-51 T 11-10-2018 IPR023214 HAD superfamily TVD_07340 9010892194ce681b21d9e1ab3de2de96 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 181 4.8E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 TVD_07340 9010892194ce681b21d9e1ab3de2de96 229 Gene3D G3DSA:1.10.150.240 20 86 2.7E-51 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 TVD_11290 e1dc41f72d33b7752bf9fa9aedb4664c 432 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 261 412 2.3E-5 T 11-10-2018 IPR010315 Protein of unknown function DUF915, hydrolase-like TVD_11290 e1dc41f72d33b7752bf9fa9aedb4664c 432 SUPERFAMILY SSF53474 214 399 2.17E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_11290 e1dc41f72d33b7752bf9fa9aedb4664c 432 Gene3D G3DSA:3.40.50.1820 217 431 7.5E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_04545 617e1b2116aaea28b7255a4d2edd7901 143 Gene3D G3DSA:3.30.530.20 2 140 1.8E-27 T 11-10-2018 IPR023393 START-like domain superfamily TVD_04545 617e1b2116aaea28b7255a4d2edd7901 143 SUPERFAMILY SSF55961 2 136 2.06E-23 T 11-10-2018 TVD_04545 617e1b2116aaea28b7255a4d2edd7901 143 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 136 2.4E-11 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase TVD_12555 2c9280c3a3b07daeb7e189be484b3483 239 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 10 219 25.24 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 TVD_12555 2c9280c3a3b07daeb7e189be484b3483 239 Gene3D G3DSA:3.40.50.300 11 225 4.7E-58 T 11-10-2018 TVD_12555 2c9280c3a3b07daeb7e189be484b3483 239 PIRSF PIRSF006755 10 229 3.8E-45 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 TVD_12555 2c9280c3a3b07daeb7e189be484b3483 239 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 14 183 1.2E-36 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 TVD_12555 2c9280c3a3b07daeb7e189be484b3483 239 SUPERFAMILY SSF52540 12 208 4.69E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_12555 2c9280c3a3b07daeb7e189be484b3483 239 Pfam PF13500 AAA domain 11 208 2.3E-35 T 11-10-2018 TVD_02570 adf88e780881b108ccf28c8b6f0142d2 156 PIRSF PIRSF004505 1 155 7.8E-44 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 TVD_02570 adf88e780881b108ccf28c8b6f0142d2 156 Gene3D G3DSA:3.40.1280.10 1 156 2.7E-49 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TVD_02570 adf88e780881b108ccf28c8b6f0142d2 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 2.9E-50 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 TVD_02570 adf88e780881b108ccf28c8b6f0142d2 156 SUPERFAMILY SSF75217 1 154 4.19E-49 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TVD_02570 adf88e780881b108ccf28c8b6f0142d2 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 3.7E-49 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 TVD_02570 adf88e780881b108ccf28c8b6f0142d2 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.812 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 TVD_04470 316d39cc99845777f3e08e51c528541c 141 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 7 131 2.2E-35 T 11-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein TVD_08660 9a1e5d72617985e6be184b2c8f6af5d5 213 SUPERFAMILY SSF48150 2 210 1.73E-52 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 TVD_08660 9a1e5d72617985e6be184b2c8f6af5d5 213 PIRSF PIRSF001435 2 213 2.4E-69 T 11-10-2018 TVD_08660 9a1e5d72617985e6be184b2c8f6af5d5 213 Gene3D G3DSA:1.10.1670.10 130 213 4.1E-15 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 TVD_08660 9a1e5d72617985e6be184b2c8f6af5d5 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 30 168 8.9E-13 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TVD_08660 9a1e5d72617985e6be184b2c8f6af5d5 213 SMART SM00478 34 191 2.4E-24 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 TVD_08660 9a1e5d72617985e6be184b2c8f6af5d5 213 Gene3D G3DSA:1.10.340.30 17 129 8.8E-35 T 11-10-2018 TVD_01855 d413912eb61fe8907300579e0d6d7a25 141 Pfam PF03610 PTS system fructose IIA component 4 113 3.6E-20 T 11-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 TVD_01855 d413912eb61fe8907300579e0d6d7a25 141 Gene3D G3DSA:3.40.50.510 3 138 7.4E-34 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 TVD_01855 d413912eb61fe8907300579e0d6d7a25 141 SUPERFAMILY SSF53062 2 130 1.83E-31 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 TVD_02880 ce257a38ca0764fc7ffb36d4c07cd625 1169 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 576 588 6.6E-9 T 11-10-2018 TVD_02880 ce257a38ca0764fc7ffb36d4c07cd625 1169 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 416 430 6.6E-9 T 11-10-2018 TVD_02880 ce257a38ca0764fc7ffb36d4c07cd625 1169 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 356 372 6.6E-9 T 11-10-2018 TVD_02880 ce257a38ca0764fc7ffb36d4c07cd625 1169 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 579 585 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TVD_02880 ce257a38ca0764fc7ffb36d4c07cd625 1169 SUPERFAMILY SSF53335 215 646 9.31E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_02880 ce257a38ca0764fc7ffb36d4c07cd625 1169 Gene3D G3DSA:3.40.50.150 336 660 6.8E-28 T 11-10-2018 TVD_03230 2fff052f036bfccd5f1de4a027fbe699 135 SUPERFAMILY SSF50346 23 131 1.12E-19 T 11-10-2018 IPR011033 PRC-barrel-like superfamily TVD_03230 2fff052f036bfccd5f1de4a027fbe699 135 Pfam PF05239 PRC-barrel domain 24 100 8.5E-17 T 11-10-2018 IPR027275 PRC-barrel domain TVD_03230 2fff052f036bfccd5f1de4a027fbe699 135 Gene3D G3DSA:2.30.30.240 13 105 7.7E-22 T 11-10-2018 TVD_05525 75ef15beb6e9a1d0de315cead53bcb7f 321 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 282 37.302 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_05525 75ef15beb6e9a1d0de315cead53bcb7f 321 Pfam PF01039 Carboxyl transferase domain 104 240 6.3E-15 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 TVD_05525 75ef15beb6e9a1d0de315cead53bcb7f 321 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 6.4E-128 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_05525 75ef15beb6e9a1d0de315cead53bcb7f 321 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 130 144 1.3E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_05525 75ef15beb6e9a1d0de315cead53bcb7f 321 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 252 261 1.3E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_05525 75ef15beb6e9a1d0de315cead53bcb7f 321 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 164 182 1.3E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_05525 75ef15beb6e9a1d0de315cead53bcb7f 321 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 201 218 1.3E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_05525 75ef15beb6e9a1d0de315cead53bcb7f 321 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 230 241 1.3E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 TVD_05525 75ef15beb6e9a1d0de315cead53bcb7f 321 Gene3D G3DSA:3.90.226.10 26 287 1.0E-82 T 11-10-2018 TVD_05525 75ef15beb6e9a1d0de315cead53bcb7f 321 SUPERFAMILY SSF52096 26 284 1.15E-82 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TVD_04830 4419d6d2c4af6612c8ddfbae7031f387 517 Gene3D G3DSA:1.25.40.80 135 323 3.6E-114 T 11-10-2018 TVD_04830 4419d6d2c4af6612c8ddfbae7031f387 517 Gene3D G3DSA:1.10.579.10 327 447 1.3E-50 T 11-10-2018 TVD_04830 4419d6d2c4af6612c8ddfbae7031f387 517 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 10 232 5.4E-69 T 11-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein TVD_04830 4419d6d2c4af6612c8ddfbae7031f387 517 Gene3D G3DSA:1.10.10.1710 448 516 1.3E-21 T 11-10-2018 TVD_04830 4419d6d2c4af6612c8ddfbae7031f387 517 SUPERFAMILY SSF48173 233 493 4.45E-51 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 TVD_04830 4419d6d2c4af6612c8ddfbae7031f387 517 Gene3D G3DSA:3.40.50.620 10 234 3.6E-114 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_08185 03d4691375e1b554a82fb33de4374c8e 317 Pfam PF14267 Domain of unknown function (DUF4357) 244 295 2.8E-18 T 11-10-2018 IPR025579 Domain of unknown function DUF4357 TVD_00245 736b29f393aa535c7593c7ac7664b788 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 19 464 5.2E-119 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase TVD_00245 736b29f393aa535c7593c7ac7664b788 464 TIGRFAM TIGR03013 EpsB_2: sugar transferase, PEP-CTERM system associated 35 464 2.5E-149 T 11-10-2018 IPR017464 Sugar transferase, PEP-CTERM system associated TVD_00245 736b29f393aa535c7593c7ac7664b788 464 Pfam PF02397 Bacterial sugar transferase 275 458 4.7E-64 T 11-10-2018 IPR003362 Bacterial sugar transferase TVD_05790 4cfad246e64bdba163c685a2039f820f 234 SUPERFAMILY SSF51735 10 234 2.37E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_05790 4cfad246e64bdba163c685a2039f820f 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 3.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_05790 4cfad246e64bdba163c685a2039f820f 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 3.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_05790 4cfad246e64bdba163c685a2039f820f 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 3.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_05790 4cfad246e64bdba163c685a2039f820f 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_05790 4cfad246e64bdba163c685a2039f820f 234 Gene3D G3DSA:3.40.50.720 7 234 3.1E-33 T 11-10-2018 TVD_05790 4cfad246e64bdba163c685a2039f820f 234 Pfam PF00106 short chain dehydrogenase 11 194 9.1E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_11185 fc2f96a100ed0238f780fb0b43be9dc4 295 Pfam PF01435 Peptidase family M48 81 293 4.5E-40 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TVD_11185 fc2f96a100ed0238f780fb0b43be9dc4 295 Hamap MF_00188 Protease HtpX [htpX]. 1 294 24.467 T 11-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 TVD_11185 fc2f96a100ed0238f780fb0b43be9dc4 295 Gene3D G3DSA:3.30.2010.10 72 165 2.3E-33 T 11-10-2018 TVD_11740 4164d8fa023e67587ea609f9db4908fe 302 Gene3D G3DSA:3.40.50.150 1 289 1.6E-94 T 11-10-2018 TVD_11740 4164d8fa023e67587ea609f9db4908fe 302 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 270 2.4E-59 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 TVD_11740 4164d8fa023e67587ea609f9db4908fe 302 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 269 37.419 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 TVD_11740 4164d8fa023e67587ea609f9db4908fe 302 SUPERFAMILY SSF53335 9 276 1.91E-79 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_05820 918749230e389dd58ee384bf2b09b78b 447 SUPERFAMILY SSF53738 149 252 2.51E-27 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 Gene3D G3DSA:3.40.120.10 1 144 2.8E-54 T 11-10-2018 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 91 100 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 369 446 2.7E-11 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 SUPERFAMILY SSF53738 254 359 1.02E-27 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 150 249 1.8E-22 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 Gene3D G3DSA:3.30.310.50 365 447 4.0E-26 T 11-10-2018 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 254 364 2.3E-20 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 Gene3D G3DSA:3.40.120.10 246 364 2.8E-30 T 11-10-2018 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 SUPERFAMILY SSF55957 364 446 1.48E-19 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 Gene3D G3DSA:3.40.120.10 168 245 1.4E-29 T 11-10-2018 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 166 185 1.6E-27 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 200 213 1.6E-27 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 90 104 1.6E-27 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 229 244 1.6E-27 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 6 134 9.7E-36 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_05820 918749230e389dd58ee384bf2b09b78b 447 SUPERFAMILY SSF53738 5 173 9.42E-39 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TVD_04260 fb5b2a8f7ec12c39a45d54db2aa891c9 159 SUPERFAMILY SSF52121 12 158 4.58E-61 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TVD_04260 fb5b2a8f7ec12c39a45d54db2aa891c9 159 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 18 155 5.0E-57 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TVD_04260 fb5b2a8f7ec12c39a45d54db2aa891c9 159 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 12 157 31.541 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TVD_04260 fb5b2a8f7ec12c39a45d54db2aa891c9 159 Gene3D G3DSA:3.40.50.960 4 158 1.4E-60 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TVD_04260 fb5b2a8f7ec12c39a45d54db2aa891c9 159 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 18 153 3.8E-57 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 TVD_03260 e25e17daac1c37200f071e053341a247 105 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 9 102 3.5E-5 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 TVD_03260 e25e17daac1c37200f071e053341a247 105 SUPERFAMILY SSF69754 1 95 4.58E-9 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like TVD_03260 e25e17daac1c37200f071e053341a247 105 Gene3D G3DSA:3.30.160.100 1 105 4.3E-7 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like TVD_05315 86bf11354a69cf98131f5ac0aec46484 486 Pfam PF03190 Protein of unknown function, DUF255 13 87 4.8E-14 T 11-10-2018 IPR004879 Domain of unknown function DUF255 TVD_05315 86bf11354a69cf98131f5ac0aec46484 486 Gene3D G3DSA:3.40.30.10 9 163 8.8E-23 T 11-10-2018 TVD_05315 86bf11354a69cf98131f5ac0aec46484 486 Gene3D G3DSA:1.50.10.10 197 384 2.9E-16 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 TVD_05315 86bf11354a69cf98131f5ac0aec46484 486 SUPERFAMILY SSF48208 203 445 7.48E-14 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TVD_05315 86bf11354a69cf98131f5ac0aec46484 486 SUPERFAMILY SSF52833 8 129 4.94E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_05335 79cec9a806b5557ddb961fe2b6ffdb2e 496 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 13 495 43.836 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TVD_05335 79cec9a806b5557ddb961fe2b6ffdb2e 496 SUPERFAMILY SSF50249 5 146 7.59E-40 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_05335 79cec9a806b5557ddb961fe2b6ffdb2e 496 Pfam PF01336 OB-fold nucleic acid binding domain 60 137 2.1E-13 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TVD_05335 79cec9a806b5557ddb961fe2b6ffdb2e 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 253 270 7.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TVD_05335 79cec9a806b5557ddb961fe2b6ffdb2e 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 377 393 7.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TVD_05335 79cec9a806b5557ddb961fe2b6ffdb2e 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 190 200 7.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TVD_05335 79cec9a806b5557ddb961fe2b6ffdb2e 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 235 248 7.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TVD_05335 79cec9a806b5557ddb961fe2b6ffdb2e 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 206 222 7.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TVD_05335 79cec9a806b5557ddb961fe2b6ffdb2e 496 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 8 495 1.8E-203 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TVD_05335 79cec9a806b5557ddb961fe2b6ffdb2e 496 Gene3D G3DSA:2.40.50.140 7 145 2.4E-38 T 11-10-2018 TVD_05335 79cec9a806b5557ddb961fe2b6ffdb2e 496 Pfam PF00152 tRNA synthetases class II (D, K and N) 153 492 4.8E-82 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_05335 79cec9a806b5557ddb961fe2b6ffdb2e 496 SUPERFAMILY SSF55681 153 493 1.72E-119 T 11-10-2018 TVD_05335 79cec9a806b5557ddb961fe2b6ffdb2e 496 Gene3D G3DSA:3.30.930.10 149 496 3.8E-132 T 11-10-2018 TVD_04525 b619552284f9a06731631edbb1168f61 266 Gene3D G3DSA:3.40.50.620 135 218 2.7E-8 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_04525 b619552284f9a06731631edbb1168f61 266 Pfam PF02698 DUF218 domain 82 249 4.1E-30 T 11-10-2018 IPR003848 Domain of unknown function DUF218 TVD_08145 e4dba25c5fa203c35c835a5ca8e41355 295 Pfam PF14281 PD-(D/E)XK nuclease superfamily 116 277 9.4E-7 T 11-10-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 TVD_13155 e24cd0b56bca6272545d34811c845a94 176 SUPERFAMILY SSF75169 43 174 1.88E-18 T 11-10-2018 IPR027396 DsrEFH-like TVD_13155 e24cd0b56bca6272545d34811c845a94 176 Gene3D G3DSA:3.40.1260.10 41 174 2.1E-19 T 11-10-2018 IPR027396 DsrEFH-like TVD_13155 e24cd0b56bca6272545d34811c845a94 176 Pfam PF02635 DsrE/DsrF-like family 52 174 9.2E-10 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_04595 d18a987a7a9fc58b32b4f01b7d73f371 556 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 412 423 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_04595 d18a987a7a9fc58b32b4f01b7d73f371 556 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 132 279 1.3E-46 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_04595 d18a987a7a9fc58b32b4f01b7d73f371 556 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 105 3.0E-33 T 11-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain TVD_04595 d18a987a7a9fc58b32b4f01b7d73f371 556 Gene3D G3DSA:1.10.1060.10 364 440 1.3E-12 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_04595 d18a987a7a9fc58b32b4f01b7d73f371 556 SUPERFAMILY SSF142019 87 300 2.48E-57 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_04595 d18a987a7a9fc58b32b4f01b7d73f371 556 Pfam PF10531 SLBB domain 292 341 1.1E-14 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_04595 d18a987a7a9fc58b32b4f01b7d73f371 556 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 556 175.284 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 TVD_04595 d18a987a7a9fc58b32b4f01b7d73f371 556 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 3 442 4.5E-170 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 TVD_04595 d18a987a7a9fc58b32b4f01b7d73f371 556 Gene3D G3DSA:3.40.50.11540 137 279 4.5E-16 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_04595 d18a987a7a9fc58b32b4f01b7d73f371 556 SUPERFAMILY SSF46548 328 441 1.26E-18 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_04595 d18a987a7a9fc58b32b4f01b7d73f371 556 Pfam PF13237 4Fe-4S dicluster domain 373 423 1.7E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TVD_07015 982cc10d5a72700ed81776c8d19ef5f6 137 SUPERFAMILY SSF101116 11 129 9.94E-39 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 TVD_07015 982cc10d5a72700ed81776c8d19ef5f6 137 TIGRFAM TIGR00208 fliS: flagellar protein FliS 12 128 9.1E-30 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 TVD_07015 982cc10d5a72700ed81776c8d19ef5f6 137 PIRSF PIRSF039090 5 137 1.9E-48 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 TVD_07015 982cc10d5a72700ed81776c8d19ef5f6 137 Gene3D G3DSA:1.20.120.340 5 133 1.4E-42 T 11-10-2018 TVD_07015 982cc10d5a72700ed81776c8d19ef5f6 137 Pfam PF02561 Flagellar protein FliS 11 127 2.9E-39 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 TVD_08340 2351a14b4ce330f93e9e1fcda1b5e45f 229 SMART SM00862 150 225 9.8E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TVD_08340 2351a14b4ce330f93e9e1fcda1b5e45f 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 8.1E-108 T 11-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 TVD_08340 2351a14b4ce330f93e9e1fcda1b5e45f 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 2.6E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TVD_08340 2351a14b4ce330f93e9e1fcda1b5e45f 229 Gene3D G3DSA:1.10.10.10 128 227 1.7E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_08340 2351a14b4ce330f93e9e1fcda1b5e45f 229 Gene3D G3DSA:3.40.50.2300 1 127 2.3E-38 T 11-10-2018 TVD_08340 2351a14b4ce330f93e9e1fcda1b5e45f 229 SUPERFAMILY SSF46894 126 225 2.24E-31 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TVD_08340 2351a14b4ce330f93e9e1fcda1b5e45f 229 SUPERFAMILY SSF52172 3 128 2.28E-43 T 11-10-2018 IPR011006 CheY-like superfamily TVD_08340 2351a14b4ce330f93e9e1fcda1b5e45f 229 Pfam PF00072 Response regulator receiver domain 5 116 8.7E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_08340 2351a14b4ce330f93e9e1fcda1b5e45f 229 SMART SM00448 3 116 2.9E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 TVD_10670 a14ebeda864fd955d5ca71bdfe393609 480 Pfam PF14559 Tetratricopeptide repeat 345 413 2.9E-8 T 11-10-2018 TVD_10670 a14ebeda864fd955d5ca71bdfe393609 480 SUPERFAMILY SSF48452 289 396 2.85E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_10670 a14ebeda864fd955d5ca71bdfe393609 480 Gene3D G3DSA:3.30.2010.10 79 150 1.3E-6 T 11-10-2018 TVD_10670 a14ebeda864fd955d5ca71bdfe393609 480 Pfam PF01435 Peptidase family M48 79 257 4.5E-29 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TVD_10670 a14ebeda864fd955d5ca71bdfe393609 480 Gene3D G3DSA:1.25.40.10 275 460 6.1E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_01380 6462d7bce1fae68f59442a2cea58c835 268 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 8 256 3.9E-57 T 11-10-2018 IPR005226 UPF0014 family TVD_01380 6462d7bce1fae68f59442a2cea58c835 268 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 251 7.0E-85 T 11-10-2018 IPR005226 UPF0014 family TVD_06905 8d532b27fa9517f6f6f87ed6483adebd 228 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 39 198 2.1E-23 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain TVD_06905 8d532b27fa9517f6f6f87ed6483adebd 228 SUPERFAMILY SSF52266 34 213 8.7E-45 T 11-10-2018 TVD_06905 8d532b27fa9517f6f6f87ed6483adebd 228 Gene3D G3DSA:3.40.50.1110 36 220 6.5E-63 T 11-10-2018 IPR036514 SGNH hydrolase superfamily TVD_09795 09767e3781cbb2ae90a667518bb5f026 600 SUPERFAMILY SSF56801 9 596 1.7E-122 T 11-10-2018 TVD_09795 09767e3781cbb2ae90a667518bb5f026 600 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 11-10-2018 IPR020845 AMP-binding, conserved site TVD_09795 09767e3781cbb2ae90a667518bb5f026 600 Pfam PF00501 AMP-binding enzyme 19 469 5.4E-94 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TVD_09795 09767e3781cbb2ae90a667518bb5f026 600 Gene3D G3DSA:3.40.50.12780 8 295 6.9E-56 T 11-10-2018 TVD_09795 09767e3781cbb2ae90a667518bb5f026 600 Gene3D G3DSA:3.40.50.12780 319 462 1.8E-39 T 11-10-2018 TVD_03920 ad0161d17702d7664527b086f27f9fb6 194 Gene3D G3DSA:1.20.120.350 9 140 3.5E-12 T 11-10-2018 IPR027359 Voltage-dependent channel domain superfamily TVD_03920 ad0161d17702d7664527b086f27f9fb6 194 SUPERFAMILY SSF81324 15 128 9.42E-10 T 11-10-2018 TVD_09105 ce3f47a0dc70e5b550874c65aec50fe2 91 SUPERFAMILY SSF47598 45 87 6.67E-5 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TVD_09105 ce3f47a0dc70e5b550874c65aec50fe2 91 Pfam PF12441 CopG antitoxin of type II toxin-antitoxin system 5 82 3.5E-36 T 11-10-2018 IPR022148 CopG antitoxin TVD_01385 600a1d20ae1f77253d3684ac78f22785 283 Pfam PF01564 Spermine/spermidine synthase domain 61 243 3.9E-50 T 11-10-2018 TVD_01385 600a1d20ae1f77253d3684ac78f22785 283 Gene3D G3DSA:2.30.140.10 3 56 1.1E-23 T 11-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 TVD_01385 600a1d20ae1f77253d3684ac78f22785 283 TIGRFAM TIGR00417 speE: spermidine synthase 7 276 4.9E-85 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 TVD_01385 600a1d20ae1f77253d3684ac78f22785 283 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 282 36.735 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 TVD_01385 600a1d20ae1f77253d3684ac78f22785 283 Pfam PF17284 Spermidine synthase tetramerisation domain 7 56 2.3E-17 T 11-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 TVD_01385 600a1d20ae1f77253d3684ac78f22785 283 SUPERFAMILY SSF53335 9 280 7.11E-75 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_01385 600a1d20ae1f77253d3684ac78f22785 283 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 11-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 TVD_01385 600a1d20ae1f77253d3684ac78f22785 283 Gene3D G3DSA:3.40.50.150 57 282 2.0E-62 T 11-10-2018 TVD_11280 3c8b7cb89a2ac1d0938a37cc83a81def 552 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 504 9.6E-167 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 TVD_11280 3c8b7cb89a2ac1d0938a37cc83a81def 552 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 56 504 1.5E-138 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 TVD_11280 3c8b7cb89a2ac1d0938a37cc83a81def 552 ProSitePatterns PS01303 BCCT family of transporters signature. 320 329 - T 11-10-2018 IPR018093 BCCT transporter, conserved site TVD_05165 db0faa50108aebbfb3a65a7872477dcf 138 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 135 11.482 T 11-10-2018 IPR022907 VapC family GO:0004540 TVD_05165 db0faa50108aebbfb3a65a7872477dcf 138 Gene3D G3DSA:3.40.50.1010 4 135 7.2E-12 T 11-10-2018 TVD_05165 db0faa50108aebbfb3a65a7872477dcf 138 Pfam PF01850 PIN domain 4 129 7.4E-13 T 11-10-2018 IPR002716 PIN domain TVD_05165 db0faa50108aebbfb3a65a7872477dcf 138 SUPERFAMILY SSF88723 1 133 2.94E-15 T 11-10-2018 IPR029060 PIN-like domain superfamily TVD_04630 60182b4dce043186e63b101044c0fa1d 188 Gene3D G3DSA:2.70.40.10 1 159 1.3E-51 T 11-10-2018 IPR036157 dUTPase-like superfamily TVD_04630 60182b4dce043186e63b101044c0fa1d 188 Hamap MF_00146 dCTP deaminase [dcd]. 1 188 28.349 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 TVD_04630 60182b4dce043186e63b101044c0fa1d 188 Pfam PF00692 dUTPase 80 184 1.4E-7 T 11-10-2018 IPR029054 dUTPase-like TVD_04630 60182b4dce043186e63b101044c0fa1d 188 SUPERFAMILY SSF51283 3 187 4.97E-52 T 11-10-2018 IPR036157 dUTPase-like superfamily TVD_04630 60182b4dce043186e63b101044c0fa1d 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 187 3.6E-49 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 TVD_02100 c70441e683f4098ac46bdd83da5566cf 247 SUPERFAMILY SSF46626 31 211 8.8E-42 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_02100 c70441e683f4098ac46bdd83da5566cf 247 Pfam PF02167 Cytochrome C1 family 39 246 4.9E-21 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 TVD_02100 c70441e683f4098ac46bdd83da5566cf 247 PRINTS PR00603 Cytochrome C1 signature 212 227 5.8E-8 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 TVD_02100 c70441e683f4098ac46bdd83da5566cf 247 PRINTS PR00603 Cytochrome C1 signature 47 66 5.8E-8 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 TVD_02100 c70441e683f4098ac46bdd83da5566cf 247 PRINTS PR00603 Cytochrome C1 signature 193 212 5.8E-8 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 TVD_02100 c70441e683f4098ac46bdd83da5566cf 247 PRINTS PR00603 Cytochrome C1 signature 115 139 5.8E-8 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 TVD_02100 c70441e683f4098ac46bdd83da5566cf 247 Gene3D G3DSA:1.10.760.10 31 212 5.6E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_00125 59c22eb1208c48f76374d161043ad459 239 SUPERFAMILY SSF54211 1 181 8.6E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold TVD_00125 59c22eb1208c48f76374d161043ad459 239 Gene3D G3DSA:3.30.230.70 10 238 1.1E-60 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TVD_00125 59c22eb1208c48f76374d161043ad459 239 SUPERFAMILY SSF55666 154 237 1.44E-24 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TVD_00125 59c22eb1208c48f76374d161043ad459 239 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.441 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 TVD_00125 59c22eb1208c48f76374d161043ad459 239 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.1E-113 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 TVD_00125 59c22eb1208c48f76374d161043ad459 239 ProSitePatterns PS01277 Ribonuclease PH signature. 116 129 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site TVD_00125 59c22eb1208c48f76374d161043ad459 239 Pfam PF03725 3' exoribonuclease family, domain 2 160 224 4.1E-14 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TVD_00125 59c22eb1208c48f76374d161043ad459 239 Pfam PF01138 3' exoribonuclease family, domain 1 11 140 3.2E-21 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 TVD_06285 c1e9affdb25af625912e7260b83523d0 324 SUPERFAMILY SSF103039 6 232 3.92E-19 T 11-10-2018 IPR028976 CheC-like superfamily TVD_06285 c1e9affdb25af625912e7260b83523d0 324 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 1.6E-23 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TVD_06285 c1e9affdb25af625912e7260b83523d0 324 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 1.6E-23 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TVD_06285 c1e9affdb25af625912e7260b83523d0 324 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 1.6E-23 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TVD_06285 c1e9affdb25af625912e7260b83523d0 324 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 1.6E-23 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TVD_06285 c1e9affdb25af625912e7260b83523d0 324 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 321 3.1E-111 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TVD_06285 c1e9affdb25af625912e7260b83523d0 324 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 252 321 1.2E-18 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) TVD_06285 c1e9affdb25af625912e7260b83523d0 324 Gene3D G3DSA:3.40.1550.10 45 232 7.1E-58 T 11-10-2018 IPR028976 CheC-like superfamily TVD_06285 c1e9affdb25af625912e7260b83523d0 324 PIRSF PIRSF002888 3 324 5.6E-100 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TVD_06285 c1e9affdb25af625912e7260b83523d0 324 Pfam PF02154 Flagellar motor switch protein FliM 39 231 4.3E-71 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TVD_06285 c1e9affdb25af625912e7260b83523d0 324 SUPERFAMILY SSF101801 250 320 4.05E-14 T 11-10-2018 IPR036429 SpoA-like superfamily TVD_13135 cbe253c18fdecdb4415c56a3c44ec52f 276 SUPERFAMILY SSF53850 28 269 8.62E-23 T 11-10-2018 TVD_13135 cbe253c18fdecdb4415c56a3c44ec52f 276 Gene3D G3DSA:3.40.190.10 32 237 6.9E-35 T 11-10-2018 TVD_13135 cbe253c18fdecdb4415c56a3c44ec52f 276 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 35 265 2.4E-47 T 11-10-2018 TVD_13135 cbe253c18fdecdb4415c56a3c44ec52f 276 Gene3D G3DSA:3.40.190.10 114 211 6.9E-35 T 11-10-2018 TVD_13735 de95a2e1d8967d3e3aad2788fd2f1148 211 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 9 184 1.7E-59 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_13735 de95a2e1d8967d3e3aad2788fd2f1148 211 Pfam PF00156 Phosphoribosyl transferase domain 44 159 1.5E-15 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TVD_13735 de95a2e1d8967d3e3aad2788fd2f1148 211 SUPERFAMILY SSF53271 2 209 6.63E-50 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TVD_13735 de95a2e1d8967d3e3aad2788fd2f1148 211 Gene3D G3DSA:3.40.50.2020 2 211 5.7E-76 T 11-10-2018 TVD_13735 de95a2e1d8967d3e3aad2788fd2f1148 211 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 211 33.782 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 TVD_11660 4a23001de83d2c4614c61e3efe92c199 161 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 7 158 8.3E-18 T 11-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like TVD_11660 4a23001de83d2c4614c61e3efe92c199 161 SUPERFAMILY SSF110857 7 153 6.97E-17 T 11-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily TVD_01285 17b61f00e9462c26dc0e9079d8ea74a5 321 SUPERFAMILY SSF50486 214 313 3.34E-29 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 TVD_01285 17b61f00e9462c26dc0e9079d8ea74a5 321 Gene3D G3DSA:3.10.25.10 216 316 7.8E-28 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TVD_01285 17b61f00e9462c26dc0e9079d8ea74a5 321 Pfam PF00551 Formyl transferase 13 189 3.0E-39 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TVD_01285 17b61f00e9462c26dc0e9079d8ea74a5 321 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 11 309 1.8E-84 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 TVD_01285 17b61f00e9462c26dc0e9079d8ea74a5 321 SUPERFAMILY SSF53328 11 215 8.77E-64 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TVD_01285 17b61f00e9462c26dc0e9079d8ea74a5 321 Pfam PF02911 Formyl transferase, C-terminal domain 213 309 5.9E-25 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TVD_01285 17b61f00e9462c26dc0e9079d8ea74a5 321 Gene3D G3DSA:3.40.50.170 5 215 2.2E-80 T 11-10-2018 TVD_01285 17b61f00e9462c26dc0e9079d8ea74a5 321 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 11 313 35.553 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 TVD_06835 6956f436dac9c370f29b7d9d7175b51d 502 Gene3D G3DSA:3.10.450.350 223 327 5.5E-13 T 11-10-2018 TVD_06835 6956f436dac9c370f29b7d9d7175b51d 502 Gene3D G3DSA:2.70.70.10 330 459 7.3E-49 T 11-10-2018 IPR011055 Duplicated hybrid motif TVD_06835 6956f436dac9c370f29b7d9d7175b51d 502 Pfam PF04225 Opacity-associated protein A LysM-like domain 132 211 1.1E-5 T 11-10-2018 IPR007340 Opacity-associated protein A TVD_06835 6956f436dac9c370f29b7d9d7175b51d 502 Pfam PF01551 Peptidase family M23 359 453 2.3E-32 T 11-10-2018 IPR016047 Peptidase M23 TVD_06835 6956f436dac9c370f29b7d9d7175b51d 502 Gene3D G3DSA:3.10.450.350 128 219 1.6E-9 T 11-10-2018 TVD_06835 6956f436dac9c370f29b7d9d7175b51d 502 SUPERFAMILY SSF51261 252 455 4.55E-60 T 11-10-2018 IPR011055 Duplicated hybrid motif TVD_12510 58410c4104992f26c42e24de7679951f 495 PRINTS PR00095 Anthranilate synthase component I signature 415 429 1.4E-25 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TVD_12510 58410c4104992f26c42e24de7679951f 495 PRINTS PR00095 Anthranilate synthase component I signature 335 348 1.4E-25 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TVD_12510 58410c4104992f26c42e24de7679951f 495 PRINTS PR00095 Anthranilate synthase component I signature 321 334 1.4E-25 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TVD_12510 58410c4104992f26c42e24de7679951f 495 PRINTS PR00095 Anthranilate synthase component I signature 430 444 1.4E-25 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TVD_12510 58410c4104992f26c42e24de7679951f 495 Gene3D G3DSA:3.60.120.10 1 486 9.5E-187 T 11-10-2018 IPR005801 ADC synthase GO:0009058 TVD_12510 58410c4104992f26c42e24de7679951f 495 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 25 481 4.7E-174 T 11-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TVD_12510 58410c4104992f26c42e24de7679951f 495 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 169 1.4E-33 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TVD_12510 58410c4104992f26c42e24de7679951f 495 SUPERFAMILY SSF56322 14 482 1.83E-163 T 11-10-2018 IPR005801 ADC synthase GO:0009058 TVD_12510 58410c4104992f26c42e24de7679951f 495 Pfam PF00425 chorismate binding enzyme 220 473 1.1E-102 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal TVD_05020 536464ca85c2f957a4a2ab92870a5002 108 Gene3D G3DSA:2.102.10.10 1 107 4.1E-33 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TVD_05020 536464ca85c2f957a4a2ab92870a5002 108 Pfam PF00355 Rieske [2Fe-2S] domain 3 91 4.9E-19 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TVD_05020 536464ca85c2f957a4a2ab92870a5002 108 SUPERFAMILY SSF50022 1 105 5.76E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TVD_12070 26b967482d53a5a8f6bdb550b91b0edc 209 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 21 34 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 TVD_12070 26b967482d53a5a8f6bdb550b91b0edc 209 SUPERFAMILY SSF53178 8 193 6.8E-66 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 TVD_12070 26b967482d53a5a8f6bdb550b91b0edc 209 Pfam PF01195 Peptidyl-tRNA hydrolase 10 190 1.7E-51 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TVD_12070 26b967482d53a5a8f6bdb550b91b0edc 209 Gene3D G3DSA:3.40.50.1470 3 196 5.2E-63 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 TVD_12070 26b967482d53a5a8f6bdb550b91b0edc 209 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 8 186 34.427 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TVD_12070 26b967482d53a5a8f6bdb550b91b0edc 209 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 115 125 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 TVD_12070 26b967482d53a5a8f6bdb550b91b0edc 209 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 9 183 2.8E-61 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TVD_02185 c512fbbf16ef7329c5e312e21f0d25c4 476 Pfam PF01225 Mur ligase family, catalytic domain 16 115 2.4E-26 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 TVD_02185 c512fbbf16ef7329c5e312e21f0d25c4 476 SUPERFAMILY SSF53244 318 466 1.04E-44 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TVD_02185 c512fbbf16ef7329c5e312e21f0d25c4 476 Gene3D G3DSA:3.90.190.20 317 474 1.3E-46 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 TVD_02185 c512fbbf16ef7329c5e312e21f0d25c4 476 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 14 470 42.943 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_02185 c512fbbf16ef7329c5e312e21f0d25c4 476 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 16 461 5.8E-165 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_02185 c512fbbf16ef7329c5e312e21f0d25c4 476 Gene3D G3DSA:3.40.50.720 15 102 3.3E-31 T 11-10-2018 TVD_02185 c512fbbf16ef7329c5e312e21f0d25c4 476 SUPERFAMILY SSF51984 15 101 3.01E-29 T 11-10-2018 TVD_02185 c512fbbf16ef7329c5e312e21f0d25c4 476 Pfam PF08245 Mur ligase middle domain 119 299 6.3E-28 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 TVD_02185 c512fbbf16ef7329c5e312e21f0d25c4 476 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 407 3.2E-19 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 TVD_02185 c512fbbf16ef7329c5e312e21f0d25c4 476 Gene3D G3DSA:3.40.1190.10 103 316 6.8E-81 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TVD_02185 c512fbbf16ef7329c5e312e21f0d25c4 476 SUPERFAMILY SSF53623 100 317 6.28E-74 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 TVD_00290 234f5a327c6b30d9cc3cc80872ca3673 291 Pfam PF13444 Acetyltransferase (GNAT) domain 30 134 1.0E-19 T 11-10-2018 TVD_00290 234f5a327c6b30d9cc3cc80872ca3673 291 SUPERFAMILY SSF55729 16 213 8.48E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_00290 234f5a327c6b30d9cc3cc80872ca3673 291 Gene3D G3DSA:3.40.630.30 15 233 1.1E-47 T 11-10-2018 TVD_00290 234f5a327c6b30d9cc3cc80872ca3673 291 TIGRFAM TIGR03694 exosort_acyl: N-acyl amino acid synthase, PEP-CTERM/exosortase system-associated 8 227 2.5E-60 T 11-10-2018 IPR022484 PEP-CTERM/exosortase system-associated acyltransferase, predicted TVD_07235 f3c48ed183420337f68d7be95e8aaf07 337 Gene3D G3DSA:2.160.10.10 111 321 1.8E-63 T 11-10-2018 TVD_07235 f3c48ed183420337f68d7be95e8aaf07 337 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 157 191 4.2E-7 T 11-10-2018 IPR001451 Hexapeptide repeat TVD_07235 f3c48ed183420337f68d7be95e8aaf07 337 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 272 297 0.2 T 11-10-2018 IPR001451 Hexapeptide repeat TVD_07235 f3c48ed183420337f68d7be95e8aaf07 337 Gene3D G3DSA:3.40.1390.10 5 108 8.2E-15 T 11-10-2018 TVD_07235 f3c48ed183420337f68d7be95e8aaf07 337 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 112 142 0.0026 T 11-10-2018 IPR001451 Hexapeptide repeat TVD_07235 f3c48ed183420337f68d7be95e8aaf07 337 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 235 269 1.4E-7 T 11-10-2018 IPR001451 Hexapeptide repeat TVD_07235 f3c48ed183420337f68d7be95e8aaf07 337 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 15 336 4.0E-102 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 TVD_07235 f3c48ed183420337f68d7be95e8aaf07 337 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 31 99 5.4E-13 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 TVD_07235 f3c48ed183420337f68d7be95e8aaf07 337 SUPERFAMILY SSF51161 77 327 2.44E-71 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily TVD_07235 f3c48ed183420337f68d7be95e8aaf07 337 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 16 337 33.726 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 TVD_11835 097a7cf4f2ea4b913588e191d3d7330c 297 Pfam PF00348 Polyprenyl synthetase 35 264 9.3E-57 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 TVD_11835 097a7cf4f2ea4b913588e191d3d7330c 297 SUPERFAMILY SSF48576 9 291 1.73E-86 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily TVD_11835 097a7cf4f2ea4b913588e191d3d7330c 297 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 84 100 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site TVD_11835 097a7cf4f2ea4b913588e191d3d7330c 297 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 216 228 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site TVD_11835 097a7cf4f2ea4b913588e191d3d7330c 297 Gene3D G3DSA:1.10.600.10 3 297 1.9E-100 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily TVD_06925 0687b8562cc6d4b09f78fe95c390bb56 434 Gene3D G3DSA:1.10.287.950 103 434 1.4E-73 T 11-10-2018 TVD_06925 0687b8562cc6d4b09f78fe95c390bb56 434 SUPERFAMILY SSF58104 125 434 7.85E-78 T 11-10-2018 TVD_06925 0687b8562cc6d4b09f78fe95c390bb56 434 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 299 328 1.6E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_06925 0687b8562cc6d4b09f78fe95c390bb56 434 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 270 297 1.6E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_06925 0687b8562cc6d4b09f78fe95c390bb56 434 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 193 222 1.6E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_06925 0687b8562cc6d4b09f78fe95c390bb56 434 SMART SM00304 103 157 1.2E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_06925 0687b8562cc6d4b09f78fe95c390bb56 434 SMART SM00304 164 210 95.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_06925 0687b8562cc6d4b09f78fe95c390bb56 434 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 216 399 4.7E-45 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_06925 0687b8562cc6d4b09f78fe95c390bb56 434 SMART SM00283 172 433 4.0E-78 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_03640 3a5d3a0d2365b464c5de7dbc0bbcca7e 669 Pfam PF00361 Proton-conducting membrane transporter 134 415 1.2E-84 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03640 3a5d3a0d2365b464c5de7dbc0bbcca7e 669 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 667 7.8E-241 T 11-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03640 3a5d3a0d2365b464c5de7dbc0bbcca7e 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 234 255 1.3E-64 T 11-10-2018 TVD_03640 3a5d3a0d2365b464c5de7dbc0bbcca7e 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 83 108 1.3E-64 T 11-10-2018 TVD_03640 3a5d3a0d2365b464c5de7dbc0bbcca7e 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 256 282 1.3E-64 T 11-10-2018 TVD_03640 3a5d3a0d2365b464c5de7dbc0bbcca7e 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 111 131 1.3E-64 T 11-10-2018 TVD_03640 3a5d3a0d2365b464c5de7dbc0bbcca7e 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 158 179 1.3E-64 T 11-10-2018 TVD_03640 3a5d3a0d2365b464c5de7dbc0bbcca7e 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 429 448 1.3E-64 T 11-10-2018 TVD_03640 3a5d3a0d2365b464c5de7dbc0bbcca7e 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 324 336 1.3E-64 T 11-10-2018 TVD_03640 3a5d3a0d2365b464c5de7dbc0bbcca7e 669 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 428 450 4.4E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 TVD_03640 3a5d3a0d2365b464c5de7dbc0bbcca7e 669 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 59 83 4.4E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 TVD_03640 3a5d3a0d2365b464c5de7dbc0bbcca7e 669 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 85 105 4.4E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 TVD_03640 3a5d3a0d2365b464c5de7dbc0bbcca7e 669 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 274 296 4.4E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 TVD_03640 3a5d3a0d2365b464c5de7dbc0bbcca7e 669 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 65 122 1.4E-27 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03425 f9a92082302cd92c76b8fde9945051d4 120 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 2 100 1.8E-30 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 TVD_03425 f9a92082302cd92c76b8fde9945051d4 120 Pfam PF13806 Rieske-like [2Fe-2S] domain 2 99 6.6E-17 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 TVD_03425 f9a92082302cd92c76b8fde9945051d4 120 SUPERFAMILY SSF50022 1 102 3.67E-37 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TVD_03425 f9a92082302cd92c76b8fde9945051d4 120 Gene3D G3DSA:2.102.10.10 1 110 1.5E-28 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TVD_10905 89fc600d47b7ce00c966759bbb4a05b7 132 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 124 23.462 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TVD_10905 89fc600d47b7ce00c966759bbb4a05b7 132 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 124 6.6E-31 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TVD_10905 89fc600d47b7ce00c966759bbb4a05b7 132 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 123 4.0E-21 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TVD_10905 89fc600d47b7ce00c966759bbb4a05b7 132 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 124 4.4E-26 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 TVD_10905 89fc600d47b7ce00c966759bbb4a05b7 132 Gene3D G3DSA:3.90.470.20 1 124 1.6E-34 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TVD_10905 89fc600d47b7ce00c966759bbb4a05b7 132 SUPERFAMILY SSF56214 1 123 6.93E-28 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TVD_10905 89fc600d47b7ce00c966759bbb4a05b7 132 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 119 1.3E-18 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 TVD_10220 a23bb4d8ba5a67c08da5ce4b15ea6291 276 SUPERFAMILY SSF56317 3 268 4.06E-79 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TVD_10220 a23bb4d8ba5a67c08da5ce4b15ea6291 276 Gene3D G3DSA:3.60.110.10 1 271 3.1E-89 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TVD_10220 a23bb4d8ba5a67c08da5ce4b15ea6291 276 Pfam PF00795 Carbon-nitrogen hydrolase 4 258 1.8E-55 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TVD_12860 6d9777c18a6825cd13dbec8ec24624da 290 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 9 270 32.26 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 TVD_12860 6d9777c18a6825cd13dbec8ec24624da 290 Pfam PF08241 Methyltransferase domain 54 149 3.4E-24 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TVD_12860 6d9777c18a6825cd13dbec8ec24624da 290 SUPERFAMILY SSF53335 14 200 2.59E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_12860 6d9777c18a6825cd13dbec8ec24624da 290 Gene3D G3DSA:3.40.50.150 4 204 1.7E-35 T 11-10-2018 TVD_12860 6d9777c18a6825cd13dbec8ec24624da 290 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 17 269 1.4E-65 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 TVD_12180 40770291154ae758ed9da90fdf472c0b 146 Gene3D G3DSA:1.10.10.10 83 146 5.7E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_01525 6aff6872759943e42bea3462d5614d8a 256 Pfam PF12146 Serine aminopeptidase, S33 51 138 2.4E-13 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 TVD_01525 6aff6872759943e42bea3462d5614d8a 256 SUPERFAMILY SSF53474 6 253 8.11E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_01525 6aff6872759943e42bea3462d5614d8a 256 Gene3D G3DSA:3.40.50.1820 5 255 6.5E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_01415 27e3655d5b233ff81704ca8396981fd1 135 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 39 3.8E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01415 27e3655d5b233ff81704ca8396981fd1 135 Gene3D G3DSA:3.30.700.10 19 134 4.8E-23 T 11-10-2018 TVD_01415 27e3655d5b233ff81704ca8396981fd1 135 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 38 1.0E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01415 27e3655d5b233ff81704ca8396981fd1 135 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01415 27e3655d5b233ff81704ca8396981fd1 135 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 40 121 6.8E-16 T 11-10-2018 IPR031982 Type IV minor pilin ComP TVD_01415 27e3655d5b233ff81704ca8396981fd1 135 SUPERFAMILY SSF54523 19 127 4.34E-19 T 11-10-2018 TVD_07600 f353745604cacf4d2a73ec897eb34eb9 184 Gene3D G3DSA:2.40.160.20 27 184 8.4E-8 T 11-10-2018 TVD_07600 f353745604cacf4d2a73ec897eb34eb9 184 SUPERFAMILY SSF56925 31 184 2.88E-10 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TVD_07600 f353745604cacf4d2a73ec897eb34eb9 184 Pfam PF13505 Outer membrane protein beta-barrel domain 10 184 3.9E-7 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel TVD_12500 4fbeb5a4a6512f27c7bdecbdc817efa1 197 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.8E-36 T 11-10-2018 TVD_12500 4fbeb5a4a6512f27c7bdecbdc817efa1 197 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.8E-36 T 11-10-2018 TVD_12500 4fbeb5a4a6512f27c7bdecbdc817efa1 197 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.8E-36 T 11-10-2018 TVD_12500 4fbeb5a4a6512f27c7bdecbdc817efa1 197 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.8E-36 T 11-10-2018 TVD_12500 4fbeb5a4a6512f27c7bdecbdc817efa1 197 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.8E-36 T 11-10-2018 TVD_12500 4fbeb5a4a6512f27c7bdecbdc817efa1 197 PRINTS PR00097 Anthranilate synthase component II signature 169 182 1.8E-36 T 11-10-2018 TVD_12500 4fbeb5a4a6512f27c7bdecbdc817efa1 197 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 1.1E-85 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 TVD_12500 4fbeb5a4a6512f27c7bdecbdc817efa1 197 SUPERFAMILY SSF52317 1 192 2.02E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_12500 4fbeb5a4a6512f27c7bdecbdc817efa1 197 Pfam PF00117 Glutamine amidotransferase class-I 4 190 1.1E-53 T 11-10-2018 IPR017926 Glutamine amidotransferase TVD_12500 4fbeb5a4a6512f27c7bdecbdc817efa1 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 3.5E-6 T 11-10-2018 TVD_12500 4fbeb5a4a6512f27c7bdecbdc817efa1 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 3.5E-6 T 11-10-2018 TVD_12500 4fbeb5a4a6512f27c7bdecbdc817efa1 197 Gene3D G3DSA:3.40.50.880 1 192 4.8E-62 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_12500 4fbeb5a4a6512f27c7bdecbdc817efa1 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.0E-13 T 11-10-2018 TVD_12500 4fbeb5a4a6512f27c7bdecbdc817efa1 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.0E-13 T 11-10-2018 TVD_12500 4fbeb5a4a6512f27c7bdecbdc817efa1 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.0E-13 T 11-10-2018 TVD_12815 ec7cc96f7d0ac778454c6e1faf3976d0 288 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 4 288 48.469 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 TVD_12815 ec7cc96f7d0ac778454c6e1faf3976d0 288 Gene3D G3DSA:1.20.140.160 131 288 1.9E-16 T 11-10-2018 TVD_12815 ec7cc96f7d0ac778454c6e1faf3976d0 288 SUPERFAMILY SSF88659 201 286 3.74E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like TVD_12815 ec7cc96f7d0ac778454c6e1faf3976d0 288 PRINTS PR00046 Major sigma-70 factor signature 256 271 3.2E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_12815 ec7cc96f7d0ac778454c6e1faf3976d0 288 PRINTS PR00046 Major sigma-70 factor signature 271 282 3.2E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_12815 ec7cc96f7d0ac778454c6e1faf3976d0 288 PRINTS PR00046 Major sigma-70 factor signature 80 93 3.2E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_12815 ec7cc96f7d0ac778454c6e1faf3976d0 288 PRINTS PR00046 Major sigma-70 factor signature 237 249 3.2E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_12815 ec7cc96f7d0ac778454c6e1faf3976d0 288 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 17 286 1.2E-115 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 TVD_12815 ec7cc96f7d0ac778454c6e1faf3976d0 288 SUPERFAMILY SSF88946 17 125 7.06E-39 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 TVD_12815 ec7cc96f7d0ac778454c6e1faf3976d0 288 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 80 93 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_12815 ec7cc96f7d0ac778454c6e1faf3976d0 288 Pfam PF04545 Sigma-70, region 4 234 284 7.7E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 TVD_12815 ec7cc96f7d0ac778454c6e1faf3976d0 288 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 256 282 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 TVD_12815 ec7cc96f7d0ac778454c6e1faf3976d0 288 Gene3D G3DSA:1.20.120.1810 17 125 4.1E-29 T 11-10-2018 TVD_12815 ec7cc96f7d0ac778454c6e1faf3976d0 288 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 51 284 5.7E-31 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 TVD_12815 ec7cc96f7d0ac778454c6e1faf3976d0 288 Pfam PF04542 Sigma-70 region 2 56 125 4.3E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 TVD_08370 4fcde8ab27b7704fd6ca687b2a29c738 240 Gene3D G3DSA:1.20.58.220 1 121 8.6E-41 T 11-10-2018 IPR038078 PhoU-like domain superfamily TVD_08370 4fcde8ab27b7704fd6ca687b2a29c738 240 SUPERFAMILY SSF109755 12 231 1.15E-67 T 11-10-2018 TVD_08370 4fcde8ab27b7704fd6ca687b2a29c738 240 Pfam PF01895 PhoU domain 130 214 4.9E-17 T 11-10-2018 IPR026022 PhoU domain TVD_08370 4fcde8ab27b7704fd6ca687b2a29c738 240 Pfam PF01895 PhoU domain 27 111 4.7E-20 T 11-10-2018 IPR026022 PhoU domain TVD_08370 4fcde8ab27b7704fd6ca687b2a29c738 240 Gene3D G3DSA:1.20.58.220 122 238 6.9E-34 T 11-10-2018 IPR038078 PhoU-like domain superfamily TVD_08370 4fcde8ab27b7704fd6ca687b2a29c738 240 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 12 223 4.5E-69 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 TVD_08370 4fcde8ab27b7704fd6ca687b2a29c738 240 PIRSF PIRSF003107 7 228 1.6E-66 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 TVD_02685 745bbe7d120ce5047975daffed6e8039 419 SUPERFAMILY SSF56954 7 413 3.79E-62 T 11-10-2018 TVD_02685 745bbe7d120ce5047975daffed6e8039 419 Pfam PF02321 Outer membrane efflux protein 238 407 5.5E-11 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_02685 745bbe7d120ce5047975daffed6e8039 419 Pfam PF02321 Outer membrane efflux protein 31 210 5.2E-19 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_02685 745bbe7d120ce5047975daffed6e8039 419 Gene3D G3DSA:1.20.1600.10 24 413 1.8E-53 T 11-10-2018 TVD_11095 d41b9c07e40577f31702ca873d9530a3 325 Pfam PF02685 Glucokinase 4 320 3.8E-82 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 TVD_11095 d41b9c07e40577f31702ca873d9530a3 325 Gene3D G3DSA:3.30.420.40 4 316 6.4E-86 T 11-10-2018 TVD_11095 d41b9c07e40577f31702ca873d9530a3 325 Gene3D G3DSA:3.40.367.20 102 305 6.4E-86 T 11-10-2018 TVD_11095 d41b9c07e40577f31702ca873d9530a3 325 SUPERFAMILY SSF53067 1 321 1.24E-49 T 11-10-2018 TVD_05945 cf9b36defbad7b0a92a6f3478569db34 703 SUPERFAMILY SSF52540 481 670 3.13E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_05945 cf9b36defbad7b0a92a6f3478569db34 703 SUPERFAMILY SSF52540 212 407 4.87E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_05945 cf9b36defbad7b0a92a6f3478569db34 703 Gene3D G3DSA:3.40.50.300 456 629 9.1E-43 T 11-10-2018 TVD_05945 cf9b36defbad7b0a92a6f3478569db34 703 SMART SM00382 490 619 3.5E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_05945 cf9b36defbad7b0a92a6f3478569db34 703 SMART SM00382 246 383 1.5E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_05945 cf9b36defbad7b0a92a6f3478569db34 703 Gene3D G3DSA:3.40.50.300 218 380 6.6E-17 T 11-10-2018 TVD_05945 cf9b36defbad7b0a92a6f3478569db34 703 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 250 379 4.5E-8 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_05945 cf9b36defbad7b0a92a6f3478569db34 703 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 494 616 3.5E-31 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 TVD_04705 2460ba1c761fb152d27b2211278ca0c3 284 Gene3D G3DSA:3.40.1010.10 30 146 9.0E-40 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TVD_04705 2460ba1c761fb152d27b2211278ca0c3 284 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 31 266 2.5E-84 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TVD_04705 2460ba1c761fb152d27b2211278ca0c3 284 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 111 144 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TVD_04705 2460ba1c761fb152d27b2211278ca0c3 284 SUPERFAMILY SSF53790 30 268 1.05E-73 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TVD_04705 2460ba1c761fb152d27b2211278ca0c3 284 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 35 242 3.7E-48 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TVD_04705 2460ba1c761fb152d27b2211278ca0c3 284 Gene3D G3DSA:3.30.950.10 147 274 2.5E-45 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TVD_07755 2e0800be401c7e111d8296541ffe3aa1 156 SUPERFAMILY SSF54593 4 117 5.07E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TVD_07755 2e0800be401c7e111d8296541ffe3aa1 156 Gene3D G3DSA:3.10.180.10 1 120 5.8E-41 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TVD_03505 b40505e4af688170c08098784c62959d 144 SUPERFAMILY SSF52821 5 143 1.7E-17 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_03505 b40505e4af688170c08098784c62959d 144 SMART SM00450 13 127 5.7E-11 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_03505 b40505e4af688170c08098784c62959d 144 Gene3D G3DSA:3.40.250.10 9 144 6.4E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_03505 b40505e4af688170c08098784c62959d 144 Pfam PF00581 Rhodanese-like domain 18 119 4.4E-9 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_06370 40b319a96c8a24fd3b13674e2fff7e4d 266 SUPERFAMILY SSF52540 1 256 9.77E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06370 40b319a96c8a24fd3b13674e2fff7e4d 266 Pfam PF13614 AAA domain 1 180 5.5E-47 T 11-10-2018 IPR025669 AAA domain TVD_06370 40b319a96c8a24fd3b13674e2fff7e4d 266 Gene3D G3DSA:3.40.50.300 1 261 1.8E-67 T 11-10-2018 TVD_13400 76bc9d94a6b95e718308310bda76dea9 226 Gene3D G3DSA:1.20.58.220 2 226 4.1E-58 T 11-10-2018 IPR038078 PhoU-like domain superfamily TVD_13400 76bc9d94a6b95e718308310bda76dea9 226 Pfam PF01865 Protein of unknown function DUF47 8 226 1.1E-56 T 11-10-2018 IPR018445 Putative phosphate transport regulator TVD_13400 76bc9d94a6b95e718308310bda76dea9 226 SUPERFAMILY SSF109755 36 219 2.22E-11 T 11-10-2018 TVD_13400 76bc9d94a6b95e718308310bda76dea9 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 8 226 5.9E-52 T 11-10-2018 IPR002727 Protein of unknown function DUF47 TVD_11675 3858c61513dd9e33c23f88241f99da31 378 Gene3D G3DSA:3.40.50.2000 170 358 4.9E-18 T 11-10-2018 TVD_13300 29cb4956434f9720c1c3162196fe5325 105 Gene3D G3DSA:3.40.50.12740 15 101 2.5E-5 T 11-10-2018 TVD_13300 29cb4956434f9720c1c3162196fe5325 105 SUPERFAMILY SSF52172 29 99 2.36E-6 T 11-10-2018 IPR011006 CheY-like superfamily TVD_00565 987f4f6c1915a70c2d4d381cdc859061 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 52 60 1.3E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TVD_00565 987f4f6c1915a70c2d4d381cdc859061 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 100 115 1.3E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TVD_00565 987f4f6c1915a70c2d4d381cdc859061 167 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 136 152 1.3E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TVD_00565 987f4f6c1915a70c2d4d381cdc859061 167 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 161 16.957 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TVD_00565 987f4f6c1915a70c2d4d381cdc859061 167 ProSitePatterns PS00855 Signal peptidases II signature. 103 115 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TVD_00565 987f4f6c1915a70c2d4d381cdc859061 167 Pfam PF01252 Signal peptidase (SPase) II 14 155 1.6E-40 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TVD_00565 987f4f6c1915a70c2d4d381cdc859061 167 TIGRFAM TIGR00077 lspA: signal peptidase II 13 157 1.1E-38 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 TVD_09030 0ab4d13b7cd7a1817b3171136ce35bd8 157 SUPERFAMILY SSF54427 24 155 1.04E-21 T 11-10-2018 IPR032710 NTF2-like domain superfamily TVD_09030 0ab4d13b7cd7a1817b3171136ce35bd8 157 Pfam PF14534 Domain of unknown function (DUF4440) 28 147 6.7E-15 T 11-10-2018 IPR027843 Domain of unknown function DUF4440 TVD_09030 0ab4d13b7cd7a1817b3171136ce35bd8 157 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 26 156 6.2E-14 T 11-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 TVD_09030 0ab4d13b7cd7a1817b3171136ce35bd8 157 Gene3D G3DSA:3.10.450.50 24 157 6.1E-28 T 11-10-2018 TVD_13710 64cacde0ddfbcc2c36462aad8261c7c9 96 Pfam PF02416 mttA/Hcf106 family 6 54 1.5E-14 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 TVD_13710 64cacde0ddfbcc2c36462aad8261c7c9 96 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 3 92 22.89 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 TVD_13710 64cacde0ddfbcc2c36462aad8261c7c9 96 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 51 1.8E-21 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 TVD_09160 df3f5136eaac7f1a48349529986e0c4a 251 Gene3D G3DSA:3.40.630.70 70 247 3.6E-64 T 11-10-2018 TVD_09160 df3f5136eaac7f1a48349529986e0c4a 251 Gene3D G3DSA:2.30.210.20 10 69 1.2E-23 T 11-10-2018 TVD_09160 df3f5136eaac7f1a48349529986e0c4a 251 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 251 97.388 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 TVD_09160 df3f5136eaac7f1a48349529986e0c4a 251 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 47 224 8.8E-61 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 TVD_09160 df3f5136eaac7f1a48349529986e0c4a 251 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 45 212 8.3E-72 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 TVD_09160 df3f5136eaac7f1a48349529986e0c4a 251 SUPERFAMILY SSF55729 15 236 8.79E-89 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_09815 2aeccd5908661bb87c89b399305a823e 195 Pfam PF03625 Domain of unknown function DUF302 97 157 5.6E-14 T 11-10-2018 IPR005180 Domain of unknown function DUF302 TVD_09815 2aeccd5908661bb87c89b399305a823e 195 Gene3D G3DSA:3.30.310.70 61 190 7.9E-9 T 11-10-2018 IPR035923 TT1751-like domain superfamily TVD_09815 2aeccd5908661bb87c89b399305a823e 195 SUPERFAMILY SSF103247 62 190 6.93E-24 T 11-10-2018 IPR035923 TT1751-like domain superfamily TVD_10425 38dbc9e6d70e0d0725747a780f750e27 284 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 50 281 4.4E-72 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 TVD_10425 38dbc9e6d70e0d0725747a780f750e27 284 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 12 284 42.164 T 11-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 TVD_10425 38dbc9e6d70e0d0725747a780f750e27 284 Pfam PF02666 Phosphatidylserine decarboxylase 64 281 1.0E-55 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 TVD_10025 caf0fa2bf022c0f208887c6df5d9b5e3 216 Pfam PF04367 Protein of unknown function (DUF502) 60 165 1.2E-37 T 11-10-2018 IPR007462 Protein of unknown function DUF502 TVD_06720 e9ada7d30f7eadef5d9662adf09eb936 406 SUPERFAMILY SSF53901 208 405 1.48E-72 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TVD_06720 e9ada7d30f7eadef5d9662adf09eb936 406 Gene3D G3DSA:3.40.47.10 1 249 1.6E-87 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TVD_06720 e9ada7d30f7eadef5d9662adf09eb936 406 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 1 404 2.4E-192 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 TVD_06720 e9ada7d30f7eadef5d9662adf09eb936 406 Gene3D G3DSA:3.40.47.10 251 395 5.2E-54 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TVD_06720 e9ada7d30f7eadef5d9662adf09eb936 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 249 363 6.2E-39 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal TVD_06720 e9ada7d30f7eadef5d9662adf09eb936 406 SUPERFAMILY SSF53901 1 246 2.54E-74 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 TVD_06720 e9ada7d30f7eadef5d9662adf09eb936 406 SMART SM00825 Beta-ketoacyl synthase 1 406 1.7E-14 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TVD_06720 e9ada7d30f7eadef5d9662adf09eb936 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 149 165 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site TVD_06720 e9ada7d30f7eadef5d9662adf09eb936 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 241 3.7E-56 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal TVD_06720 e9ada7d30f7eadef5d9662adf09eb936 406 PIRSF PIRSF000447 1 406 9.7E-185 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 TVD_09600 d45eb7c1881d774b84a85f02f144592a 148 Gene3D G3DSA:3.40.1260.10 29 148 4.9E-31 T 11-10-2018 IPR027396 DsrEFH-like TVD_09600 d45eb7c1881d774b84a85f02f144592a 148 SUPERFAMILY SSF75169 31 148 6.18E-21 T 11-10-2018 IPR027396 DsrEFH-like TVD_09600 d45eb7c1881d774b84a85f02f144592a 148 Pfam PF02635 DsrE/DsrF-like family 32 147 1.4E-13 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_10540 7dcb321c801a00d85e6a1ea506b0ed53 286 Pfam PF07728 AAA domain (dynein-related subfamily) 47 181 8.4E-33 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 TVD_10540 7dcb321c801a00d85e6a1ea506b0ed53 286 SUPERFAMILY SSF52540 31 217 4.35E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10540 7dcb321c801a00d85e6a1ea506b0ed53 286 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 194 278 2.3E-28 T 11-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal TVD_10540 7dcb321c801a00d85e6a1ea506b0ed53 286 Gene3D G3DSA:3.40.50.300 30 199 3.9E-32 T 11-10-2018 TVD_02510 757077f4a11f905e801397c2408b4ec4 337 SUPERFAMILY SSF52540 112 290 2.5E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_02510 757077f4a11f905e801397c2408b4ec4 337 Pfam PF02562 PhoH-like protein 110 313 3.3E-92 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 TVD_02510 757077f4a11f905e801397c2408b4ec4 337 Gene3D G3DSA:3.40.50.300 107 313 4.7E-70 T 11-10-2018 TVD_08540 4bb262a4b0c4af809d23f8bd0756ac92 342 Gene3D G3DSA:3.40.718.10 3 341 1.0E-127 T 11-10-2018 TVD_08540 4bb262a4b0c4af809d23f8bd0756ac92 342 PIRSF PIRSF002465 3 340 4.2E-128 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 TVD_08540 4bb262a4b0c4af809d23f8bd0756ac92 342 SUPERFAMILY SSF53659 6 336 7.4E-103 T 11-10-2018 TVD_08540 4bb262a4b0c4af809d23f8bd0756ac92 342 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 145.493 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 TVD_08540 4bb262a4b0c4af809d23f8bd0756ac92 342 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 337 1.5E-114 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 TVD_08540 4bb262a4b0c4af809d23f8bd0756ac92 342 Pfam PF02504 Fatty acid synthesis protein 6 326 3.0E-109 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 TVD_00320 c5e17e69b5bc3bf28098ba9e5e79122b 359 SMART SM00382 42 205 7.5E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_00320 c5e17e69b5bc3bf28098ba9e5e79122b 359 Pfam PF13401 AAA domain 43 171 2.7E-21 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_00320 c5e17e69b5bc3bf28098ba9e5e79122b 359 Gene3D G3DSA:3.40.50.300 29 186 3.4E-12 T 11-10-2018 TVD_00320 c5e17e69b5bc3bf28098ba9e5e79122b 359 SUPERFAMILY SSF52540 5 265 3.5E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_00320 c5e17e69b5bc3bf28098ba9e5e79122b 359 TIGRFAM TIGR03015 pepcterm_ATPase: putative secretion ATPase, PEP-CTERM locus subfamily 1 269 1.5E-119 T 11-10-2018 IPR017466 ATPase, secretion system, PEP-CTERM, predicted TVD_02800 bc9bd327ec41b803f2f4c64a972ec6f9 123 Gene3D G3DSA:3.40.250.10 3 121 2.1E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_02800 bc9bd327ec41b803f2f4c64a972ec6f9 123 SUPERFAMILY SSF52821 11 120 8.38E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_02800 bc9bd327ec41b803f2f4c64a972ec6f9 123 Pfam PF00581 Rhodanese-like domain 24 114 1.2E-14 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_02800 bc9bd327ec41b803f2f4c64a972ec6f9 123 SMART SM00450 22 118 9.7E-16 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_12805 b886eeca5f897f11243bb9e31e1461cb 225 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 4.1E-84 T 11-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 TVD_12805 b886eeca5f897f11243bb9e31e1461cb 225 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_12805 b886eeca5f897f11243bb9e31e1461cb 225 SUPERFAMILY SSF52540 1 217 6.46E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_12805 b886eeca5f897f11243bb9e31e1461cb 225 Pfam PF00005 ABC transporter 18 165 6.9E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_12805 b886eeca5f897f11243bb9e31e1461cb 225 SMART SM00382 27 214 5.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_12805 b886eeca5f897f11243bb9e31e1461cb 225 Gene3D G3DSA:3.40.50.300 1 223 1.0E-63 T 11-10-2018 TVD_10585 5f4e8c274652760692fd91f33f5d6227 414 Gene3D G3DSA:2.40.160.60 15 414 6.0E-85 T 11-10-2018 TVD_10585 5f4e8c274652760692fd91f33f5d6227 414 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 33 414 3.3E-25 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) TVD_10585 5f4e8c274652760692fd91f33f5d6227 414 SUPERFAMILY SSF56935 29 414 1.56E-50 T 11-10-2018 TVD_07360 fa72f125042d90e2219758a47fd82660 286 Gene3D G3DSA:1.10.600.10 3 279 1.7E-86 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily TVD_07360 fa72f125042d90e2219758a47fd82660 286 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 152 177 - T 11-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 TVD_07360 fa72f125042d90e2219758a47fd82660 286 Pfam PF00494 Squalene/phytoene synthase 13 263 5.8E-81 T 11-10-2018 TVD_07360 fa72f125042d90e2219758a47fd82660 286 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 10 275 1.9E-116 T 11-10-2018 IPR017828 Squalene synthase HpnD-like GO:0016117|GO:0016767 TVD_07360 fa72f125042d90e2219758a47fd82660 286 SUPERFAMILY SSF48576 3 277 7.05E-91 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily TVD_02855 d21da32f95462252d9bcb98ee0f15b60 128 SUPERFAMILY SSF51182 4 109 2.04E-9 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TVD_02855 d21da32f95462252d9bcb98ee0f15b60 128 Gene3D G3DSA:2.60.120.10 3 125 1.9E-10 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TVD_07760 31aea1b5ce1dfffe3e6bcb5a8e8ae265 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 2.4E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_07760 31aea1b5ce1dfffe3e6bcb5a8e8ae265 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 2.4E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_07760 31aea1b5ce1dfffe3e6bcb5a8e8ae265 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 2.4E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_07760 31aea1b5ce1dfffe3e6bcb5a8e8ae265 125 Pfam PF12840 Helix-turn-helix domain 10 69 1.7E-14 T 11-10-2018 TVD_07760 31aea1b5ce1dfffe3e6bcb5a8e8ae265 125 SMART SM00418 8 85 1.8E-17 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_07760 31aea1b5ce1dfffe3e6bcb5a8e8ae265 125 SUPERFAMILY SSF46785 4 93 6.61E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_07760 31aea1b5ce1dfffe3e6bcb5a8e8ae265 125 Gene3D G3DSA:1.10.10.10 2 93 2.2E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_12780 09bcbc32080b9910b3b31ecb7a6106ec 540 ProSitePatterns PS01303 BCCT family of transporters signature. 324 333 - T 11-10-2018 IPR018093 BCCT transporter, conserved site TVD_12780 09bcbc32080b9910b3b31ecb7a6106ec 540 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 62 509 2.3E-159 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 TVD_12780 09bcbc32080b9910b3b31ecb7a6106ec 540 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 24 509 2.0E-191 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 TVD_11540 884ec384e55ad5d92b648f5e57d5e46d 299 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 19 291 2.2E-13 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 TVD_11540 884ec384e55ad5d92b648f5e57d5e46d 299 PIRSF PIRSF028561 1 299 3.3E-110 T 11-10-2018 IPR014548 Predicted acyltransferase TVD_00385 547665759813baa1ab97f2ca6a098dc2 609 Gene3D G3DSA:3.60.20.10 58 202 8.6E-19 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_00385 547665759813baa1ab97f2ca6a098dc2 609 Pfam PF00733 Asparagine synthase 222 601 1.9E-76 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TVD_00385 547665759813baa1ab97f2ca6a098dc2 609 PIRSF PIRSF001589 72 609 4.1E-84 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 TVD_00385 547665759813baa1ab97f2ca6a098dc2 609 SUPERFAMILY SSF52402 215 594 1.56E-59 T 11-10-2018 TVD_00385 547665759813baa1ab97f2ca6a098dc2 609 SUPERFAMILY SSF56235 61 204 3.57E-19 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_00385 547665759813baa1ab97f2ca6a098dc2 609 Pfam PF13537 Glutamine amidotransferase domain 77 143 3.9E-8 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain TVD_00275 185afe146316d36618c31972b7b72a8a 570 Gene3D G3DSA:3.10.350.10 32 111 6.9E-6 T 11-10-2018 IPR036779 LysM domain superfamily TVD_00275 185afe146316d36618c31972b7b72a8a 570 Pfam PF01476 LysM domain 41 93 1.8E-4 T 11-10-2018 IPR018392 LysM domain TVD_08635 197414a955deb67eca328e41666c5b9d 132 Gene3D G3DSA:1.20.210.10 5 126 8.5E-9 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_08635 197414a955deb67eca328e41666c5b9d 132 SUPERFAMILY SSF81442 7 129 4.71E-10 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_05250 a4e07ba9f1380ba2f1ee4548bc1c6af7 165 SUPERFAMILY SSF103247 37 162 1.12E-22 T 11-10-2018 IPR035923 TT1751-like domain superfamily TVD_05250 a4e07ba9f1380ba2f1ee4548bc1c6af7 165 Pfam PF03625 Domain of unknown function DUF302 70 132 8.3E-11 T 11-10-2018 IPR005180 Domain of unknown function DUF302 TVD_05250 a4e07ba9f1380ba2f1ee4548bc1c6af7 165 Gene3D G3DSA:3.30.310.70 37 165 1.1E-17 T 11-10-2018 IPR035923 TT1751-like domain superfamily TVD_02370 339f7a14701d72431ae5c4e28feed59c 98 Pfam PF00276 Ribosomal protein L23 8 91 1.4E-31 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 TVD_02370 339f7a14701d72431ae5c4e28feed59c 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 6 95 21.986 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 TVD_02370 339f7a14701d72431ae5c4e28feed59c 98 Gene3D G3DSA:3.30.70.330 5 96 6.7E-34 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily TVD_02370 339f7a14701d72431ae5c4e28feed59c 98 SUPERFAMILY SSF54189 5 93 7.55E-30 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_08830 3be587ed630abe0a8106e0f222b73add 204 SUPERFAMILY SSF144091 5 188 3.27E-36 T 11-10-2018 TVD_08830 3be587ed630abe0a8106e0f222b73add 204 Pfam PF01694 Rhomboid family 39 187 1.3E-26 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 TVD_08830 3be587ed630abe0a8106e0f222b73add 204 Gene3D G3DSA:1.20.1540.10 2 192 6.3E-28 T 11-10-2018 IPR035952 Rhomboid-like superfamily TVD_00395 275886a16b9ec963f7c905e308ee133c 267 Pfam PF12146 Serine aminopeptidase, S33 26 147 6.4E-11 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 TVD_00395 275886a16b9ec963f7c905e308ee133c 267 TIGRFAM TIGR03101 hydr2_PEP: exosortase A system-associated hydrolase 2 4 261 3.5E-83 T 11-10-2018 IPR017532 Hydrolase, ortholog 2, exosortase system type 1 associated TVD_00395 275886a16b9ec963f7c905e308ee133c 267 Gene3D G3DSA:3.40.50.1820 7 206 1.6E-23 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_00395 275886a16b9ec963f7c905e308ee133c 267 SUPERFAMILY SSF53474 15 240 2.39E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_05645 a4b332a15b92e2d5d97b887445008eaf 172 SUPERFAMILY SSF103247 43 169 1.31E-10 T 11-10-2018 IPR035923 TT1751-like domain superfamily TVD_05645 a4b332a15b92e2d5d97b887445008eaf 172 Pfam PF03625 Domain of unknown function DUF302 98 141 2.1E-5 T 11-10-2018 IPR005180 Domain of unknown function DUF302 TVD_06920 a311e5f44215b6ccde2b081cdaaeca43 292 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 283 15.086 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 TVD_06920 a311e5f44215b6ccde2b081cdaaeca43 292 Pfam PF02673 Bacitracin resistance protein BacA 6 277 2.8E-65 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 TVD_06500 5dd7372b670cd859807bd0a0fc47348a 385 SUPERFAMILY SSF53383 32 384 5.55E-80 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_06500 5dd7372b670cd859807bd0a0fc47348a 385 Pfam PF00155 Aminotransferase class I and II 49 380 1.3E-48 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TVD_06500 5dd7372b670cd859807bd0a0fc47348a 385 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 20 384 59.74 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 TVD_06500 5dd7372b670cd859807bd0a0fc47348a 385 Gene3D G3DSA:3.90.1150.10 39 378 2.0E-112 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_06500 5dd7372b670cd859807bd0a0fc47348a 385 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 25 382 3.1E-105 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 TVD_06500 5dd7372b670cd859807bd0a0fc47348a 385 Gene3D G3DSA:3.40.640.10 61 292 2.0E-112 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_04990 8a76d4fd79d9467d415b0b88198b3f76 709 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 589 695 5.7E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_04990 8a76d4fd79d9467d415b0b88198b3f76 709 PRINTS PR00344 Bacterial sensor protein C-terminal signature 658 676 9.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_04990 8a76d4fd79d9467d415b0b88198b3f76 709 PRINTS PR00344 Bacterial sensor protein C-terminal signature 681 694 9.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_04990 8a76d4fd79d9467d415b0b88198b3f76 709 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 642 9.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_04990 8a76d4fd79d9467d415b0b88198b3f76 709 Gene3D G3DSA:3.30.565.10 546 700 1.7E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_04990 8a76d4fd79d9467d415b0b88198b3f76 709 SUPERFAMILY SSF55781 326 464 5.15E-8 T 11-10-2018 TVD_04990 8a76d4fd79d9467d415b0b88198b3f76 709 Gene3D G3DSA:1.10.3210.10 2 276 2.7E-53 T 11-10-2018 TVD_04990 8a76d4fd79d9467d415b0b88198b3f76 709 SUPERFAMILY SSF109604 7 269 1.19E-51 T 11-10-2018 TVD_04990 8a76d4fd79d9467d415b0b88198b3f76 709 Pfam PF08668 HDOD domain 11 206 3.9E-41 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD TVD_04990 8a76d4fd79d9467d415b0b88198b3f76 709 SUPERFAMILY SSF55874 548 694 1.83E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_04990 8a76d4fd79d9467d415b0b88198b3f76 709 SMART SM00387 586 697 3.6E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_04990 8a76d4fd79d9467d415b0b88198b3f76 709 Gene3D G3DSA:1.10.287.130 484 538 5.8E-5 T 11-10-2018 TVD_04990 8a76d4fd79d9467d415b0b88198b3f76 709 Gene3D G3DSA:3.30.450.40 299 467 1.1E-6 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_07090 5743ab42a9bcbd84dbda3fa3cac7c98c 335 Gene3D G3DSA:3.90.1150.10 31 310 3.3E-52 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_07090 5743ab42a9bcbd84dbda3fa3cac7c98c 335 Gene3D G3DSA:3.40.640.10 43 247 3.3E-52 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_07090 5743ab42a9bcbd84dbda3fa3cac7c98c 335 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 199 212 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 TVD_07090 5743ab42a9bcbd84dbda3fa3cac7c98c 335 Pfam PF00155 Aminotransferase class I and II 61 318 2.9E-29 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TVD_07090 5743ab42a9bcbd84dbda3fa3cac7c98c 335 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 13 332 1.5E-110 T 11-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 TVD_07090 5743ab42a9bcbd84dbda3fa3cac7c98c 335 SUPERFAMILY SSF53383 11 333 1.15E-59 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_09940 ada8393757565962e850de0383d69dcc 167 Pfam PF13673 Acetyltransferase (GNAT) domain 25 139 1.2E-15 T 11-10-2018 IPR000182 GNAT domain TVD_09940 ada8393757565962e850de0383d69dcc 167 SUPERFAMILY SSF55729 3 143 1.68E-34 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_09940 ada8393757565962e850de0383d69dcc 167 Gene3D G3DSA:3.40.630.30 3 140 1.4E-34 T 11-10-2018 TVD_12540 9d9e4cbecb8e00b7714f2c29c68cc9d8 389 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 7 366 39.605 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 TVD_12540 9d9e4cbecb8e00b7714f2c29c68cc9d8 389 Gene3D G3DSA:3.30.470.20 184 378 2.8E-71 T 11-10-2018 TVD_12540 9d9e4cbecb8e00b7714f2c29c68cc9d8 389 SUPERFAMILY SSF52440 6 100 1.58E-23 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily TVD_12540 9d9e4cbecb8e00b7714f2c29c68cc9d8 389 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 7 359 1.2E-115 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 TVD_12540 9d9e4cbecb8e00b7714f2c29c68cc9d8 389 Gene3D G3DSA:3.40.50.20 1 112 5.0E-36 T 11-10-2018 TVD_12540 9d9e4cbecb8e00b7714f2c29c68cc9d8 389 SUPERFAMILY SSF51246 307 363 1.02E-13 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 TVD_12540 9d9e4cbecb8e00b7714f2c29c68cc9d8 389 Pfam PF02222 ATP-grasp domain 113 283 1.8E-46 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type TVD_12540 9d9e4cbecb8e00b7714f2c29c68cc9d8 389 Gene3D G3DSA:3.30.1490.20 114 183 2.7E-16 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TVD_12540 9d9e4cbecb8e00b7714f2c29c68cc9d8 389 SUPERFAMILY SSF56059 103 301 2.23E-52 T 11-10-2018 TVD_10490 ca25bba7f8ee7eb1c1d935f4dba1af53 276 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 49 211 1.3E-32 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 TVD_10490 ca25bba7f8ee7eb1c1d935f4dba1af53 276 Gene3D G3DSA:1.20.120.1760 35 161 1.7E-14 T 11-10-2018 TVD_10490 ca25bba7f8ee7eb1c1d935f4dba1af53 276 Pfam PF01066 CDP-alcohol phosphatidyltransferase 41 104 1.4E-12 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TVD_10490 ca25bba7f8ee7eb1c1d935f4dba1af53 276 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 82 104 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TVD_07450 0865f0f121d69712cedc34024f2ec77d 128 Pfam PF04241 Protein of unknown function (DUF423) 25 111 8.4E-28 T 11-10-2018 IPR006696 Protein of unknown function DUF423 TVD_01465 bea3443e787f0a496d07672a2b30652b 60 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 60 1.3E-15 T 11-10-2018 IPR007711 Toxin HigB-1 TVD_01465 bea3443e787f0a496d07672a2b30652b 60 SUPERFAMILY SSF143011 7 60 1.83E-14 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_01465 bea3443e787f0a496d07672a2b30652b 60 Gene3D G3DSA:3.30.2310.20 1 60 9.4E-19 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_09875 5692eb59f6ed6475e21446431308767c 336 SUPERFAMILY SSF50129 8 162 4.25E-16 T 11-10-2018 IPR011032 GroES-like superfamily TVD_09875 5692eb59f6ed6475e21446431308767c 336 SUPERFAMILY SSF51735 129 276 4.68E-21 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_09875 5692eb59f6ed6475e21446431308767c 336 Gene3D G3DSA:3.90.180.10 10 109 1.0E-5 T 11-10-2018 TVD_09875 5692eb59f6ed6475e21446431308767c 336 Gene3D G3DSA:3.90.180.10 111 320 3.4E-28 T 11-10-2018 TVD_09875 5692eb59f6ed6475e21446431308767c 336 Gene3D G3DSA:3.40.50.720 141 270 3.4E-28 T 11-10-2018 TVD_08875 680e58de9ae24eae65a1eb5dbbf567e7 478 SMART SM00091 8 74 1.2E-6 T 11-10-2018 IPR000014 PAS domain TVD_08875 680e58de9ae24eae65a1eb5dbbf567e7 478 SUPERFAMILY SSF55781 164 303 7.41E-20 T 11-10-2018 TVD_08875 680e58de9ae24eae65a1eb5dbbf567e7 478 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 131 1.0E-19 T 11-10-2018 IPR000014 PAS domain TVD_08875 680e58de9ae24eae65a1eb5dbbf567e7 478 SUPERFAMILY SSF55785 13 128 2.79E-21 T 11-10-2018 IPR035965 PAS domain superfamily TVD_08875 680e58de9ae24eae65a1eb5dbbf567e7 478 SMART SM00065 157 311 3.1E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_08875 680e58de9ae24eae65a1eb5dbbf567e7 478 Gene3D G3DSA:3.30.450.40 125 316 2.0E-19 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_08875 680e58de9ae24eae65a1eb5dbbf567e7 478 Pfam PF08448 PAS fold 17 128 9.6E-13 T 11-10-2018 IPR013656 PAS fold-4 TVD_08875 680e58de9ae24eae65a1eb5dbbf567e7 478 SMART SM00267 303 476 4.5E-62 T 11-10-2018 IPR000160 GGDEF domain TVD_08875 680e58de9ae24eae65a1eb5dbbf567e7 478 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 310 475 9.0E-52 T 11-10-2018 IPR000160 GGDEF domain TVD_08875 680e58de9ae24eae65a1eb5dbbf567e7 478 SUPERFAMILY SSF55073 319 475 2.9E-45 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_08875 680e58de9ae24eae65a1eb5dbbf567e7 478 Pfam PF00990 Diguanylate cyclase, GGDEF domain 314 472 9.1E-47 T 11-10-2018 IPR000160 GGDEF domain TVD_08875 680e58de9ae24eae65a1eb5dbbf567e7 478 Gene3D G3DSA:3.30.450.20 9 124 9.8E-23 T 11-10-2018 TVD_08875 680e58de9ae24eae65a1eb5dbbf567e7 478 Gene3D G3DSA:3.30.70.270 317 477 1.4E-54 T 11-10-2018 TVD_08875 680e58de9ae24eae65a1eb5dbbf567e7 478 Pfam PF13185 GAF domain 160 298 4.0E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 TVD_13790 02b5d2c7c73977e4ec0a639fa5dca9d9 469 SUPERFAMILY SSF54368 3 100 5.89E-35 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TVD_13790 02b5d2c7c73977e4ec0a639fa5dca9d9 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 3.1E-138 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TVD_13790 02b5d2c7c73977e4ec0a639fa5dca9d9 469 SUPERFAMILY SSF55931 102 468 1.28E-138 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 TVD_13790 02b5d2c7c73977e4ec0a639fa5dca9d9 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 8.0E-31 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 TVD_13790 02b5d2c7c73977e4ec0a639fa5dca9d9 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 TVD_13790 02b5d2c7c73977e4ec0a639fa5dca9d9 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 11-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TVD_13790 02b5d2c7c73977e4ec0a639fa5dca9d9 469 SMART SM01230 102 379 1.7E-147 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TVD_13790 02b5d2c7c73977e4ec0a639fa5dca9d9 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 TVD_13790 02b5d2c7c73977e4ec0a639fa5dca9d9 469 Gene3D G3DSA:3.10.20.70 2 104 3.3E-39 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TVD_13790 02b5d2c7c73977e4ec0a639fa5dca9d9 469 Gene3D G3DSA:3.30.590.10 105 457 8.2E-148 T 11-10-2018 TVD_13790 02b5d2c7c73977e4ec0a639fa5dca9d9 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 468 3.2E-206 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TVD_04065 30555ec2d6c409c7a16f041c5be9e23e 298 Pfam PF03193 RsgA GTPase 55 227 1.9E-35 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 TVD_04065 30555ec2d6c409c7a16f041c5be9e23e 298 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 3 294 27.055 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 TVD_04065 30555ec2d6c409c7a16f041c5be9e23e 298 Gene3D G3DSA:3.40.50.300 57 228 1.4E-36 T 11-10-2018 TVD_04065 30555ec2d6c409c7a16f041c5be9e23e 298 SUPERFAMILY SSF52540 70 289 1.68E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04065 30555ec2d6c409c7a16f041c5be9e23e 298 Gene3D G3DSA:1.10.40.50 233 298 2.7E-19 T 11-10-2018 TVD_04065 30555ec2d6c409c7a16f041c5be9e23e 298 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 40 286 8.4E-47 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 TVD_06970 8d58d03b97cb5b06ab744753ae61f559 343 Gene3D G3DSA:3.20.20.140 3 343 2.1E-109 T 11-10-2018 TVD_06970 8d58d03b97cb5b06ab744753ae61f559 343 Pfam PF01979 Amidohydrolase family 11 276 1.9E-14 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TVD_06970 8d58d03b97cb5b06ab744753ae61f559 343 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 3.1E-145 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_06970 8d58d03b97cb5b06ab744753ae61f559 343 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_06970 8d58d03b97cb5b06ab744753ae61f559 343 ProSitePatterns PS00483 Dihydroorotase signature 2. 245 256 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_06970 8d58d03b97cb5b06ab744753ae61f559 343 SUPERFAMILY SSF51556 1 342 1.02E-147 T 11-10-2018 IPR032466 Metal-dependent hydrolase TVD_06970 8d58d03b97cb5b06ab744753ae61f559 343 PIRSF PIRSF001237 1 343 2.7E-143 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_06970 8d58d03b97cb5b06ab744753ae61f559 343 Hamap MF_00219 Dihydroorotase [pyrC]. 2 343 47.699 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 TVD_07320 0892d349eb9c6f07a93bda885e4fc3f0 206 Gene3D G3DSA:3.40.50.360 1 199 9.2E-73 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TVD_07320 0892d349eb9c6f07a93bda885e4fc3f0 206 Pfam PF03358 NADPH-dependent FMN reductase 5 127 4.7E-12 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TVD_07320 0892d349eb9c6f07a93bda885e4fc3f0 206 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 197 1.3E-94 T 11-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 TVD_07320 0892d349eb9c6f07a93bda885e4fc3f0 206 SUPERFAMILY SSF52218 3 197 9.57E-58 T 11-10-2018 IPR029039 Flavoprotein-like superfamily TVD_07320 0892d349eb9c6f07a93bda885e4fc3f0 206 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 2 201 45.252 T 11-10-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 TVD_10630 889379f32fd6cea0588445550982c771 238 Gene3D G3DSA:1.10.1060.10 28 141 2.3E-10 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_10630 889379f32fd6cea0588445550982c771 238 SUPERFAMILY SSF46548 32 139 1.05E-16 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_10630 889379f32fd6cea0588445550982c771 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 109 120 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_10630 889379f32fd6cea0588445550982c771 238 Pfam PF13534 4Fe-4S dicluster domain 62 123 4.0E-9 T 11-10-2018 TVD_05040 233fe962414cdf2550203b6e4576119d 431 SUPERFAMILY SSF53067 4 234 3.13E-40 T 11-10-2018 TVD_05040 233fe962414cdf2550203b6e4576119d 431 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 235 1.4E-23 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TVD_05040 233fe962414cdf2550203b6e4576119d 431 Gene3D G3DSA:3.30.420.40 1 227 2.3E-46 T 11-10-2018 TVD_05040 233fe962414cdf2550203b6e4576119d 431 PIRSF PIRSF000538 1 430 5.6E-53 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 TVD_05040 233fe962414cdf2550203b6e4576119d 431 SUPERFAMILY SSF53067 244 426 1.11E-20 T 11-10-2018 TVD_05040 233fe962414cdf2550203b6e4576119d 431 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 277 420 2.1E-11 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TVD_05040 233fe962414cdf2550203b6e4576119d 431 Gene3D G3DSA:3.30.420.40 229 430 3.3E-30 T 11-10-2018 TVD_06270 d568134fce0cf9b89318ff1cc27b3d0e 148 Pfam PF02050 Flagellar FliJ protein 19 135 1.0E-12 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 TVD_06270 d568134fce0cf9b89318ff1cc27b3d0e 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 4 136 9.7E-15 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 TVD_08470 62cac8492c63d8d2616d941ef9dbfe9b 92 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 81 6.1E-21 T 11-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system TVD_08470 62cac8492c63d8d2616d941ef9dbfe9b 92 Gene3D G3DSA:3.10.450.530 1 83 1.9E-10 T 11-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily TVD_07135 1cb094659f2ffbbc7474dddfad1200bf 166 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 4 159 35.603 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TVD_07135 1cb094659f2ffbbc7474dddfad1200bf 166 Pfam PF02542 YgbB family 5 158 2.1E-64 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TVD_07135 1cb094659f2ffbbc7474dddfad1200bf 166 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 5 157 1.5E-65 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TVD_07135 1cb094659f2ffbbc7474dddfad1200bf 166 Gene3D G3DSA:3.30.1330.50 2 165 1.4E-69 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TVD_07135 1cb094659f2ffbbc7474dddfad1200bf 166 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 38 53 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TVD_07135 1cb094659f2ffbbc7474dddfad1200bf 166 SUPERFAMILY SSF69765 4 159 9.29E-64 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 TVD_03235 e8e65f11070481aab31ee422cfbbbcf0 59 Pfam PF05532 CsbD-like 4 56 9.0E-16 T 11-10-2018 IPR008462 CsbD-like domain TVD_03235 e8e65f11070481aab31ee422cfbbbcf0 59 SUPERFAMILY SSF69047 1 58 4.97E-15 T 11-10-2018 IPR036629 YjbJ superfamily TVD_03235 e8e65f11070481aab31ee422cfbbbcf0 59 Gene3D G3DSA:1.10.1470.10 1 59 1.2E-15 T 11-10-2018 IPR036629 YjbJ superfamily TVD_04010 f899a0464318e4c279ca8a9cffd1a7ef 54 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 54 18.536 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 TVD_04010 f899a0464318e4c279ca8a9cffd1a7ef 54 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 2.8E-13 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 TVD_04010 f899a0464318e4c279ca8a9cffd1a7ef 54 PIRSF PIRSF036466 1 53 5.7E-21 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 TVD_00490 da60708c08f81a0ac411a10a27bb78bf 422 SUPERFAMILY SSF51126 7 298 5.5E-29 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor TVD_00490 da60708c08f81a0ac411a10a27bb78bf 422 SMART SM00710 102 128 1900.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TVD_00490 da60708c08f81a0ac411a10a27bb78bf 422 SMART SM00710 130 151 49.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TVD_00490 da60708c08f81a0ac411a10a27bb78bf 422 SMART SM00710 73 97 2100.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TVD_00490 da60708c08f81a0ac411a10a27bb78bf 422 SMART SM00710 255 277 1900.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TVD_00490 da60708c08f81a0ac411a10a27bb78bf 422 SMART SM00710 282 303 620.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TVD_00490 da60708c08f81a0ac411a10a27bb78bf 422 SMART SM00710 158 180 3600.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat TVD_00490 da60708c08f81a0ac411a10a27bb78bf 422 Gene3D G3DSA:2.160.20.10 6 306 1.8E-24 T 11-10-2018 IPR012334 Pectin lyase fold TVD_10850 634820a48ef12c01db81a79d64a9ed9d 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 8.5E-21 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10850 634820a48ef12c01db81a79d64a9ed9d 149 SUPERFAMILY SSF55653 60 147 6.02E-25 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily TVD_10850 634820a48ef12c01db81a79d64a9ed9d 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.298 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_10850 634820a48ef12c01db81a79d64a9ed9d 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 2.3E-25 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal TVD_10850 634820a48ef12c01db81a79d64a9ed9d 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10850 634820a48ef12c01db81a79d64a9ed9d 149 Gene3D G3DSA:3.40.5.10 1 50 6.3E-22 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10850 634820a48ef12c01db81a79d64a9ed9d 149 SUPERFAMILY SSF55658 1 56 5.93E-18 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal TVD_10850 634820a48ef12c01db81a79d64a9ed9d 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 1.5E-47 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_10850 634820a48ef12c01db81a79d64a9ed9d 149 Gene3D G3DSA:3.10.430.100 61 148 1.4E-27 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily TVD_03330 7f72d8b1488295e821c6474841de23d0 466 SUPERFAMILY SSF56281 3 466 5.24E-120 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_03330 7f72d8b1488295e821c6474841de23d0 466 Gene3D G3DSA:3.60.15.10 7 442 5.3E-132 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_03330 7f72d8b1488295e821c6474841de23d0 466 Pfam PF16661 Metallo-beta-lactamase superfamily domain 19 170 9.7E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_03330 7f72d8b1488295e821c6474841de23d0 466 Pfam PF10996 Beta-Casp domain 254 382 1.4E-24 T 11-10-2018 IPR022712 Beta-Casp domain TVD_03330 7f72d8b1488295e821c6474841de23d0 466 SMART SM01027 254 382 2.5E-50 T 11-10-2018 IPR022712 Beta-Casp domain TVD_03330 7f72d8b1488295e821c6474841de23d0 466 Gene3D G3DSA:3.40.50.10890 222 408 5.3E-132 T 11-10-2018 TVD_03330 7f72d8b1488295e821c6474841de23d0 466 SMART SM00849 14 243 9.6E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_03330 7f72d8b1488295e821c6474841de23d0 466 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 396 458 5.6E-16 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain TVD_12255 e713c68736f4af46b880d79258a6f0ca 588 Gene3D G3DSA:1.10.3720.10 302 562 9.0E-36 T 11-10-2018 IPR035906 MetI-like superfamily TVD_12255 e713c68736f4af46b880d79258a6f0ca 588 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 360 550 1.6E-8 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TVD_12255 e713c68736f4af46b880d79258a6f0ca 588 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 277 4.1E-6 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TVD_12255 e713c68736f4af46b880d79258a6f0ca 588 SUPERFAMILY SSF161098 19 276 5.1E-41 T 11-10-2018 IPR035906 MetI-like superfamily TVD_12255 e713c68736f4af46b880d79258a6f0ca 588 SUPERFAMILY SSF161098 300 551 6.28E-39 T 11-10-2018 IPR035906 MetI-like superfamily TVD_12255 e713c68736f4af46b880d79258a6f0ca 588 Gene3D G3DSA:1.10.3720.10 26 284 1.1E-47 T 11-10-2018 IPR035906 MetI-like superfamily TVD_12735 c8dcc78c3b10eb4bda7e3ef84ea1215a 180 Gene3D G3DSA:3.30.70.1560 68 167 9.4E-40 T 11-10-2018 TVD_12735 c8dcc78c3b10eb4bda7e3ef84ea1215a 180 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 39 53 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 TVD_12735 c8dcc78c3b10eb4bda7e3ef84ea1215a 180 Gene3D G3DSA:3.30.70.580 1 67 1.7E-27 T 11-10-2018 TVD_12735 c8dcc78c3b10eb4bda7e3ef84ea1215a 180 SUPERFAMILY SSF55120 4 177 2.08E-43 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_12735 c8dcc78c3b10eb4bda7e3ef84ea1215a 180 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 8 178 1.5E-56 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 TVD_12735 c8dcc78c3b10eb4bda7e3ef84ea1215a 180 Pfam PF00849 RNA pseudouridylate synthase 34 148 2.1E-14 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_00450 e76bd153eb678a01e21a660c2804a3e1 533 TIGRFAM TIGR03098 ligase_PEP_1: acyl-CoA ligase (AMP-forming), exosortase A-associated 4 522 5.0E-235 T 11-10-2018 IPR017529 Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated TVD_00450 e76bd153eb678a01e21a660c2804a3e1 533 Gene3D G3DSA:3.40.50.12780 3 425 3.0E-105 T 11-10-2018 TVD_00450 e76bd153eb678a01e21a660c2804a3e1 533 Pfam PF00501 AMP-binding enzyme 12 429 6.6E-94 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TVD_00450 e76bd153eb678a01e21a660c2804a3e1 533 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 11-10-2018 IPR020845 AMP-binding, conserved site TVD_00450 e76bd153eb678a01e21a660c2804a3e1 533 Pfam PF13193 AMP-binding enzyme C-terminal domain 438 513 1.7E-9 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain TVD_00450 e76bd153eb678a01e21a660c2804a3e1 533 SUPERFAMILY SSF56801 4 526 4.45E-137 T 11-10-2018 TVD_00450 e76bd153eb678a01e21a660c2804a3e1 533 Gene3D G3DSA:3.30.300.30 426 525 1.2E-21 T 11-10-2018 TVD_11205 2023829fe950854696f62405239bd464 576 SUPERFAMILY SSF55785 246 370 2.09E-16 T 11-10-2018 IPR035965 PAS domain superfamily TVD_11205 2023829fe950854696f62405239bd464 576 SMART SM00267 372 544 3.6E-66 T 11-10-2018 IPR000160 GGDEF domain TVD_11205 2023829fe950854696f62405239bd464 576 Pfam PF12729 Four helix bundle sensory module for signal transduction 10 176 7.5E-10 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain TVD_11205 2023829fe950854696f62405239bd464 576 SMART SM00086 330 372 2.3E-4 T 11-10-2018 IPR001610 PAC motif TVD_11205 2023829fe950854696f62405239bd464 576 Pfam PF08447 PAS fold 279 365 2.8E-15 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 TVD_11205 2023829fe950854696f62405239bd464 576 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 253 379 7.2E-11 T 11-10-2018 IPR000014 PAS domain TVD_11205 2023829fe950854696f62405239bd464 576 Gene3D G3DSA:3.30.70.270 376 547 2.7E-59 T 11-10-2018 TVD_11205 2023829fe950854696f62405239bd464 576 SUPERFAMILY SSF55073 388 545 4.94E-50 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_11205 2023829fe950854696f62405239bd464 576 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 381 543 6.1E-45 T 11-10-2018 IPR000160 GGDEF domain TVD_11205 2023829fe950854696f62405239bd464 576 Gene3D G3DSA:2.10.70.100 326 373 2.2E-11 T 11-10-2018 TVD_11205 2023829fe950854696f62405239bd464 576 Pfam PF00990 Diguanylate cyclase, GGDEF domain 383 539 3.3E-50 T 11-10-2018 IPR000160 GGDEF domain TVD_11205 2023829fe950854696f62405239bd464 576 Gene3D G3DSA:3.30.450.20 252 324 3.7E-21 T 11-10-2018 TVD_03020 0091d401b451e499f22a6b31b68cb75c 199 SUPERFAMILY SSF53335 9 196 2.92E-30 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_03020 0091d401b451e499f22a6b31b68cb75c 199 Pfam PF06080 Protein of unknown function (DUF938) 5 198 6.5E-70 T 11-10-2018 IPR010342 Protein of unknown function DUF938 TVD_03020 0091d401b451e499f22a6b31b68cb75c 199 Gene3D G3DSA:3.40.50.150 3 196 5.3E-27 T 11-10-2018 TVD_12840 e26fd5c0ddc218c10fddb84712e0b8f0 309 PRINTS PR00605 Class IC cytochrome C signature 137 148 1.1E-6 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 TVD_12840 e26fd5c0ddc218c10fddb84712e0b8f0 309 PRINTS PR00605 Class IC cytochrome C signature 280 302 1.1E-6 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 TVD_12840 e26fd5c0ddc218c10fddb84712e0b8f0 309 Gene3D G3DSA:1.10.760.10 102 305 5.9E-53 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_12840 e26fd5c0ddc218c10fddb84712e0b8f0 309 PIRSF PIRSF000006 1 309 4.0E-72 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III TVD_12840 e26fd5c0ddc218c10fddb84712e0b8f0 309 SUPERFAMILY SSF46626 211 308 8.75E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_12840 e26fd5c0ddc218c10fddb84712e0b8f0 309 Gene3D G3DSA:1.10.760.10 183 282 5.9E-53 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_12840 e26fd5c0ddc218c10fddb84712e0b8f0 309 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 214 302 5.7E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_12840 e26fd5c0ddc218c10fddb84712e0b8f0 309 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 135 202 1.3E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_12840 e26fd5c0ddc218c10fddb84712e0b8f0 309 SUPERFAMILY SSF46626 33 212 2.07E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_12840 e26fd5c0ddc218c10fddb84712e0b8f0 309 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 9 309 1.4E-69 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III TVD_12840 e26fd5c0ddc218c10fddb84712e0b8f0 309 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 14 60 8.6E-26 T 11-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal TVD_12840 e26fd5c0ddc218c10fddb84712e0b8f0 309 Gene3D G3DSA:1.20.58.1490 1 71 9.9E-22 T 11-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily TVD_09870 d41ba6629acd0933acb4e5574db16016 132 SUPERFAMILY SSF55620 1 129 8.89E-27 T 11-10-2018 TVD_09870 d41ba6629acd0933acb4e5574db16016 132 Gene3D G3DSA:3.30.479.10 1 131 3.9E-28 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 TVD_09870 d41ba6629acd0933acb4e5574db16016 132 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 129 9.3E-22 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 TVD_12695 5a66bf8f7856319f3c75434a5ec6f16d 372 Gene3D G3DSA:3.30.450.90 1 102 5.0E-30 T 11-10-2018 TVD_12695 5a66bf8f7856319f3c75434a5ec6f16d 372 SUPERFAMILY SSF52540 6 338 1.47E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_12695 5a66bf8f7856319f3c75434a5ec6f16d 372 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 345 9.9E-131 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 TVD_12695 5a66bf8f7856319f3c75434a5ec6f16d 372 Gene3D G3DSA:3.40.50.300 104 355 1.7E-86 T 11-10-2018 TVD_12695 5a66bf8f7856319f3c75434a5ec6f16d 372 Pfam PF00437 Type II/IV secretion system protein 11 257 8.2E-36 T 11-10-2018 IPR001482 Type II/IV secretion system protein TVD_12370 a8e211cdd1c8f78fa5cdae8df7af8ef6 90 Pfam PF00403 Heavy-metal-associated domain 3 60 3.4E-10 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TVD_12370 a8e211cdd1c8f78fa5cdae8df7af8ef6 90 SUPERFAMILY SSF55008 3 61 1.09E-11 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TVD_12370 a8e211cdd1c8f78fa5cdae8df7af8ef6 90 ProSitePatterns PS01047 Heavy-metal-associated domain. 5 34 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 TVD_12370 a8e211cdd1c8f78fa5cdae8df7af8ef6 90 Gene3D G3DSA:3.30.70.100 1 62 1.3E-12 T 11-10-2018 TVD_08605 6614410e8554452c20800835d0139e26 210 SUPERFAMILY SSF52540 46 161 1.49E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_08605 6614410e8554452c20800835d0139e26 210 Pfam PF00154 recA bacterial DNA recombination protein 27 82 1.5E-4 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TVD_08605 6614410e8554452c20800835d0139e26 210 Gene3D G3DSA:3.40.50.300 46 160 3.7E-29 T 11-10-2018 TVD_08605 6614410e8554452c20800835d0139e26 210 PIRSF PIRSF037290 1 209 3.5E-50 T 11-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 TVD_07110 509baa80f7527159f6eeeeb7df6adadf 323 SUPERFAMILY SSF81345 3 321 3.92E-73 T 11-10-2018 IPR037294 ABC transporter, BtuC-like TVD_07110 509baa80f7527159f6eeeeb7df6adadf 323 Pfam PF01032 FecCD transport family 17 321 4.4E-87 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 TVD_07110 509baa80f7527159f6eeeeb7df6adadf 323 Gene3D G3DSA:1.10.3470.10 2 323 1.0E-91 T 11-10-2018 IPR037294 ABC transporter, BtuC-like TVD_13205 4dde0911b829da1535ff68622bf3b0d0 211 Pfam PF03243 Alkylmercury lyase 80 178 7.1E-11 T 11-10-2018 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 TVD_13205 4dde0911b829da1535ff68622bf3b0d0 211 SUPERFAMILY SSF160387 89 198 3.14E-15 T 11-10-2018 TVD_13205 4dde0911b829da1535ff68622bf3b0d0 211 Gene3D G3DSA:2.40.10.490 19 197 1.7E-19 T 11-10-2018 TVD_02125 1cd5ad685d889f3838c515f874005f4a 619 Gene3D G3DSA:3.40.50.2300 375 529 3.5E-52 T 11-10-2018 TVD_02125 1cd5ad685d889f3838c515f874005f4a 619 Gene3D G3DSA:3.40.50.2300 274 598 3.5E-52 T 11-10-2018 TVD_02125 1cd5ad685d889f3838c515f874005f4a 619 SUPERFAMILY SSF53822 274 611 2.64E-56 T 11-10-2018 IPR028082 Periplasmic binding protein-like I TVD_02125 1cd5ad685d889f3838c515f874005f4a 619 Gene3D G3DSA:1.25.40.650 166 263 4.7E-9 T 11-10-2018 TVD_02125 1cd5ad685d889f3838c515f874005f4a 619 Pfam PF04348 LppC putative lipoprotein 89 607 6.7E-70 T 11-10-2018 IPR007443 Penicillin-binding protein activator LpoA TVD_08365 7a8045448df468249d19e8d99dedca7d 276 SUPERFAMILY SSF52540 29 262 1.61E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_08365 7a8045448df468249d19e8d99dedca7d 276 Gene3D G3DSA:3.40.50.300 28 274 1.0E-63 T 11-10-2018 TVD_08365 7a8045448df468249d19e8d99dedca7d 276 SMART SM00382 54 257 1.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_08365 7a8045448df468249d19e8d99dedca7d 276 Pfam PF00005 ABC transporter 45 200 4.2E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_08365 7a8045448df468249d19e8d99dedca7d 276 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_08365 7a8045448df468249d19e8d99dedca7d 276 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 30 276 8.9E-127 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 TVD_07515 4b69554bfcd81656fc3dd66c4eff371b 215 SUPERFAMILY SSF53474 14 211 7.69E-34 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_07515 4b69554bfcd81656fc3dd66c4eff371b 215 Pfam PF01738 Dienelactone hydrolase family 58 202 7.3E-8 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 TVD_07515 4b69554bfcd81656fc3dd66c4eff371b 215 Gene3D G3DSA:3.40.50.1820 1 212 2.0E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_11775 4c1df4a6b1c0a13f57a50b9e01d6a697 169 Gene3D G3DSA:2.30.30.240 95 169 3.6E-26 T 11-10-2018 TVD_11775 4c1df4a6b1c0a13f57a50b9e01d6a697 169 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 168 8.3E-44 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 TVD_11775 4c1df4a6b1c0a13f57a50b9e01d6a697 169 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 169 22.143 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 TVD_11775 4c1df4a6b1c0a13f57a50b9e01d6a697 169 Pfam PF01782 RimM N-terminal domain 10 89 5.3E-21 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 TVD_11775 4c1df4a6b1c0a13f57a50b9e01d6a697 169 Gene3D G3DSA:2.40.30.60 1 94 2.9E-26 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 TVD_11775 4c1df4a6b1c0a13f57a50b9e01d6a697 169 Pfam PF05239 PRC-barrel domain 98 164 4.0E-8 T 11-10-2018 IPR027275 PRC-barrel domain TVD_11775 4c1df4a6b1c0a13f57a50b9e01d6a697 169 SUPERFAMILY SSF50346 100 169 5.81E-19 T 11-10-2018 IPR011033 PRC-barrel-like superfamily TVD_11775 4c1df4a6b1c0a13f57a50b9e01d6a697 169 SUPERFAMILY SSF50447 6 93 1.2E-18 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily TVD_02470 906557ad9d75cb273c71a06eb8e646cb 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site TVD_02470 906557ad9d75cb273c71a06eb8e646cb 129 Pfam PF00411 Ribosomal protein S11 19 128 8.4E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TVD_02470 906557ad9d75cb273c71a06eb8e646cb 129 SUPERFAMILY SSF53137 14 129 6.28E-48 T 11-10-2018 TVD_02470 906557ad9d75cb273c71a06eb8e646cb 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.2E-55 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02470 906557ad9d75cb273c71a06eb8e646cb 129 PIRSF PIRSF002131 1 129 1.2E-53 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TVD_02470 906557ad9d75cb273c71a06eb8e646cb 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 33.103 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TVD_02470 906557ad9d75cb273c71a06eb8e646cb 129 Gene3D G3DSA:3.30.420.80 1 129 2.2E-55 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 TVD_06740 de60d430d9f76c395c40af3ace938083 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 5.4E-37 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 TVD_06740 de60d430d9f76c395c40af3ace938083 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 4.2E-29 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 TVD_06740 de60d430d9f76c395c40af3ace938083 72 SUPERFAMILY SSF50249 1 70 6.61E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_06740 de60d430d9f76c395c40af3ace938083 72 SMART SM00316 4 72 1.0E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 TVD_06740 de60d430d9f76c395c40af3ace938083 72 Gene3D G3DSA:2.40.50.140 1 72 3.1E-36 T 11-10-2018 TVD_06740 de60d430d9f76c395c40af3ace938083 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.151 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 TVD_03690 913bd693f807621ddff4223c7b564293 89 Pfam PF00312 Ribosomal protein S15 8 88 1.3E-36 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_03690 913bd693f807621ddff4223c7b564293 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 4.0E-27 T 11-10-2018 TVD_03690 913bd693f807621ddff4223c7b564293 89 SUPERFAMILY SSF47060 3 89 5.89E-35 T 11-10-2018 IPR009068 S15/NS1, RNA-binding TVD_03690 913bd693f807621ddff4223c7b564293 89 Gene3D G3DSA:1.10.287.10 2 89 5.0E-36 T 11-10-2018 TVD_03690 913bd693f807621ddff4223c7b564293 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_03690 913bd693f807621ddff4223c7b564293 89 SMART SM01387 8 88 1.9E-48 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_03690 913bd693f807621ddff4223c7b564293 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 6.3E-37 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_03690 913bd693f807621ddff4223c7b564293 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.839 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_06280 ee80e0188d716a429279f3c115699ae5 165 Pfam PF03748 Flagellar basal body-associated protein FliL 65 165 3.0E-25 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 TVD_06725 47015f270c5c367b44a5247d1838d341 79 SUPERFAMILY SSF47336 2 77 5.63E-23 T 11-10-2018 IPR036736 ACP-like superfamily TVD_06725 47015f270c5c367b44a5247d1838d341 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site TVD_06725 47015f270c5c367b44a5247d1838d341 79 Gene3D G3DSA:1.10.1200.10 1 76 5.2E-29 T 11-10-2018 IPR036736 ACP-like superfamily TVD_06725 47015f270c5c367b44a5247d1838d341 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.384 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TVD_06725 47015f270c5c367b44a5247d1838d341 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 5.5E-16 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain TVD_06725 47015f270c5c367b44a5247d1838d341 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 1.2E-36 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TVD_06725 47015f270c5c367b44a5247d1838d341 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 4.0E-12 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 TVD_10300 93a1f1857997270f845b06a661e67853 459 SUPERFAMILY SSF161098 264 440 2.45E-10 T 11-10-2018 IPR035906 MetI-like superfamily TVD_10300 93a1f1857997270f845b06a661e67853 459 Gene3D G3DSA:1.10.3720.10 262 451 1.2E-13 T 11-10-2018 IPR035906 MetI-like superfamily TVD_10300 93a1f1857997270f845b06a661e67853 459 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 457 3.9E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TVD_08970 d218f7458aab9f6042f939691b68735e 373 Pfam PF00700 Bacterial flagellin C-terminal helical region 289 372 2.3E-23 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TVD_08970 d218f7458aab9f6042f939691b68735e 373 Gene3D G3DSA:1.20.1330.10 45 178 8.4E-73 T 11-10-2018 TVD_08970 d218f7458aab9f6042f939691b68735e 373 Gene3D G3DSA:1.20.58.1830 5 33 8.4E-73 T 11-10-2018 TVD_08970 d218f7458aab9f6042f939691b68735e 373 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 6.8E-39 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TVD_08970 d218f7458aab9f6042f939691b68735e 373 PRINTS PR00207 Flagellin signature 111 134 4.8E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TVD_08970 d218f7458aab9f6042f939691b68735e 373 PRINTS PR00207 Flagellin signature 76 95 4.8E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TVD_08970 d218f7458aab9f6042f939691b68735e 373 PRINTS PR00207 Flagellin signature 37 54 4.8E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TVD_08970 d218f7458aab9f6042f939691b68735e 373 SUPERFAMILY SSF64518 1 372 2.09E-90 T 11-10-2018 TVD_08970 d218f7458aab9f6042f939691b68735e 373 Gene3D G3DSA:1.10.8.410 325 372 2.1E-20 T 11-10-2018 TVD_08970 d218f7458aab9f6042f939691b68735e 373 Gene3D G3DSA:1.20.1330.10 211 324 5.2E-18 T 11-10-2018 TVD_10535 956b430109516e3e13fe66ff493eae79 851 Gene3D G3DSA:3.40.50.410 652 843 2.2E-11 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TVD_10535 956b430109516e3e13fe66ff493eae79 851 SMART SM00327 658 850 1.8E-11 T 11-10-2018 IPR002035 von Willebrand factor, type A TVD_10535 956b430109516e3e13fe66ff493eae79 851 SUPERFAMILY SSF53300 661 845 2.05E-17 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily TVD_13330 113f229f30171e65aaacbe4c6b1947ca 334 Pfam PF00586 AIR synthase related protein, N-terminal domain 38 149 3.1E-18 T 11-10-2018 IPR016188 PurM-like, N-terminal domain TVD_13330 113f229f30171e65aaacbe4c6b1947ca 334 Gene3D G3DSA:3.90.650.10 156 334 9.9E-44 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TVD_13330 113f229f30171e65aaacbe4c6b1947ca 334 Gene3D G3DSA:3.30.1330.10 8 154 1.0E-47 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TVD_13330 113f229f30171e65aaacbe4c6b1947ca 334 SUPERFAMILY SSF56042 155 312 1.64E-34 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily TVD_13330 113f229f30171e65aaacbe4c6b1947ca 334 SUPERFAMILY SSF55326 7 153 3.31E-31 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily TVD_13330 113f229f30171e65aaacbe4c6b1947ca 334 Pfam PF02769 AIR synthase related protein, C-terminal domain 161 307 1.3E-22 T 11-10-2018 IPR010918 PurM-like, C-terminal domain TVD_13330 113f229f30171e65aaacbe4c6b1947ca 334 PIRSF PIRSF005644 1 334 1.1E-107 T 11-10-2018 IPR011854 Carbamoyl dehydratase HypE TVD_13330 113f229f30171e65aaacbe4c6b1947ca 334 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 6 334 5.4E-116 T 11-10-2018 IPR011854 Carbamoyl dehydratase HypE TVD_03790 cc9f2577e208bac6a8dfb27debdac028 224 Pfam PF00581 Rhodanese-like domain 98 211 1.4E-13 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_03790 cc9f2577e208bac6a8dfb27debdac028 224 SMART SM00450 94 216 1.7E-11 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_03790 cc9f2577e208bac6a8dfb27debdac028 224 SUPERFAMILY SSF52821 96 221 3.8E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_03790 cc9f2577e208bac6a8dfb27debdac028 224 Gene3D G3DSA:3.40.250.10 86 220 1.7E-20 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_05230 35122d9b1ff0ce49b9411c08c6380ff9 104 Pfam PF01845 CcdB protein 3 103 4.5E-29 T 11-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 TVD_05230 35122d9b1ff0ce49b9411c08c6380ff9 104 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 19 103 4.0E-11 T 11-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 TVD_05230 35122d9b1ff0ce49b9411c08c6380ff9 104 Gene3D G3DSA:2.30.30.110 1 104 9.1E-31 T 11-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor TVD_05230 35122d9b1ff0ce49b9411c08c6380ff9 104 SUPERFAMILY SSF50118 2 104 4.97E-25 T 11-10-2018 TVD_01335 35597048faa588d714f93581adb4d86e 386 SUPERFAMILY SSF50952 41 384 9.55E-42 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 TVD_01335 35597048faa588d714f93581adb4d86e 386 Gene3D G3DSA:2.120.10.30 37 385 1.6E-114 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like TVD_01335 35597048faa588d714f93581adb4d86e 386 Pfam PF07995 Glucose / Sorbosone dehydrogenase 51 381 2.9E-124 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase TVD_00735 14aacff9a666cf454fa06cbddf9f36d4 136 Pfam PF08797 HIRAN domain 38 104 4.7E-11 T 11-10-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 TVD_00735 14aacff9a666cf454fa06cbddf9f36d4 136 SMART SM00910 33 129 3.2E-11 T 11-10-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 TVD_00735 14aacff9a666cf454fa06cbddf9f36d4 136 Gene3D G3DSA:3.30.70.2330 26 135 4.1E-18 T 11-10-2018 TVD_09200 32045ab026805784ac0c8493829517f4 159 Gene3D G3DSA:1.10.10.10 108 154 2.7E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_09200 32045ab026805784ac0c8493829517f4 159 Gene3D G3DSA:1.10.10.10 63 106 4.9E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_09200 32045ab026805784ac0c8493829517f4 159 Pfam PF02631 RecX family 39 153 1.8E-26 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 TVD_09200 32045ab026805784ac0c8493829517f4 159 Gene3D G3DSA:1.10.10.10 14 58 1.5E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_09200 32045ab026805784ac0c8493829517f4 159 Hamap MF_01114 Regulatory protein RecX [recX]. 8 159 12.959 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 TVD_11215 15ed3e960d362cfe3da8f2dad9a86f86 155 Pfam PF05425 Copper resistance protein D 48 149 7.4E-14 T 11-10-2018 IPR008457 Copper resistance protein D GO:0016021 TVD_02600 cfe89d524535347a51d39f0a0ac54575 214 SUPERFAMILY SSF52266 33 207 2.29E-37 T 11-10-2018 TVD_02600 cfe89d524535347a51d39f0a0ac54575 214 Gene3D G3DSA:3.40.50.1110 34 210 2.4E-45 T 11-10-2018 IPR036514 SGNH hydrolase superfamily TVD_02600 cfe89d524535347a51d39f0a0ac54575 214 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 39 196 1.6E-25 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain TVD_08415 772c4c36570fe0218615c69a5d7f2ad2 214 Pfam PF01794 Ferric reductase like transmembrane component 55 168 3.6E-14 T 11-10-2018 IPR013130 Ferric reductase transmembrane component-like domain TVD_08415 772c4c36570fe0218615c69a5d7f2ad2 214 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 9 207 19.636 T 11-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 TVD_05825 d6dfa9b6fc49d48f38d260127006c0fe 476 Gene3D G3DSA:3.90.550.10 9 352 8.3E-118 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_05825 d6dfa9b6fc49d48f38d260127006c0fe 476 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 10 475 4.3E-215 T 11-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 TVD_05825 d6dfa9b6fc49d48f38d260127006c0fe 476 Pfam PF01050 Mannose-6-phosphate isomerase 321 471 2.1E-73 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 TVD_05825 d6dfa9b6fc49d48f38d260127006c0fe 476 Gene3D G3DSA:2.60.120.10 353 463 9.3E-18 T 11-10-2018 IPR014710 RmlC-like jelly roll fold TVD_05825 d6dfa9b6fc49d48f38d260127006c0fe 476 SUPERFAMILY SSF53448 11 285 5.85E-75 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_05825 d6dfa9b6fc49d48f38d260127006c0fe 476 Pfam PF00483 Nucleotidyl transferase 12 285 7.3E-69 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TVD_05825 d6dfa9b6fc49d48f38d260127006c0fe 476 SUPERFAMILY SSF51182 191 476 1.94E-86 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily TVD_09095 79481794c08e05a9e12da6dba2c8225e 233 SUPERFAMILY SSF53448 2 210 5.2E-29 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_09095 79481794c08e05a9e12da6dba2c8225e 233 Gene3D G3DSA:3.90.550.10 1 221 3.6E-41 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_09095 79481794c08e05a9e12da6dba2c8225e 233 Pfam PF00535 Glycosyl transferase family 2 3 114 2.2E-23 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TVD_09090 94ad4069c35c9d397b2a5f5555c29d37 195 Pfam PF09335 SNARE associated Golgi protein 37 151 4.3E-14 T 11-10-2018 IPR032816 SNARE associated Golgi protein TVD_03620 596506f5a4d51863f75713779821deec 354 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 14 348 25.342 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03620 596506f5a4d51863f75713779821deec 354 Pfam PF00146 NADH dehydrogenase 23 340 2.1E-127 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03620 596506f5a4d51863f75713779821deec 354 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 218 231 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03560 a624530be8955d7415c0110d604e8e51 295 SUPERFAMILY SSF51717 9 283 3.66E-99 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_03560 a624530be8955d7415c0110d604e8e51 295 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 22 281 6.8E-97 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 TVD_03560 a624530be8955d7415c0110d604e8e51 295 Pfam PF00809 Pterin binding enzyme 23 267 2.7E-87 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_03560 a624530be8955d7415c0110d604e8e51 295 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_03560 a624530be8955d7415c0110d604e8e51 295 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 56 69 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_03560 a624530be8955d7415c0110d604e8e51 295 Gene3D G3DSA:3.20.20.20 3 286 1.0E-106 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 TVD_02630 7a16a54b6a11259bdc32e31a4584ccbd 521 SUPERFAMILY SSF52096 44 274 7.81E-23 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TVD_02630 7a16a54b6a11259bdc32e31a4584ccbd 521 Pfam PF01957 NfeD-like C-terminal, partner-binding 374 509 1.4E-31 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain TVD_02630 7a16a54b6a11259bdc32e31a4584ccbd 521 Gene3D G3DSA:2.40.50.140 447 517 3.1E-18 T 11-10-2018 TVD_02630 7a16a54b6a11259bdc32e31a4584ccbd 521 SUPERFAMILY SSF141322 445 508 1.28E-11 T 11-10-2018 TVD_11325 29df14f4772ab9d92e7fca0de5ed0bce 564 Gene3D G3DSA:3.60.110.10 4 258 2.0E-85 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TVD_11325 29df14f4772ab9d92e7fca0de5ed0bce 564 SUPERFAMILY SSF56317 6 239 5.62E-64 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily TVD_11325 29df14f4772ab9d92e7fca0de5ed0bce 564 TIGRFAM TIGR00552 nadE: NAD+ synthetase 293 540 8.2E-60 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 TVD_11325 29df14f4772ab9d92e7fca0de5ed0bce 564 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 7 563 28.861 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TVD_11325 29df14f4772ab9d92e7fca0de5ed0bce 564 Gene3D G3DSA:3.40.50.620 285 563 2.5E-109 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_11325 29df14f4772ab9d92e7fca0de5ed0bce 564 Pfam PF02540 NAD synthase 287 538 2.2E-71 T 11-10-2018 IPR022310 NAD/GMP synthase TVD_11325 29df14f4772ab9d92e7fca0de5ed0bce 564 Pfam PF00795 Carbon-nitrogen hydrolase 8 235 2.4E-28 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 TVD_11325 29df14f4772ab9d92e7fca0de5ed0bce 564 PIRSF PIRSF006630 4 564 9.7E-190 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 TVD_11325 29df14f4772ab9d92e7fca0de5ed0bce 564 SUPERFAMILY SSF52402 281 546 2.21E-73 T 11-10-2018 TVD_10925 177d2f2a72dc2683c4436d95ee25ceed 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 18 219 8.2E-67 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 TVD_10925 177d2f2a72dc2683c4436d95ee25ceed 225 SMART SM00535 17 145 2.9E-46 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 TVD_10925 177d2f2a72dc2683c4436d95ee25ceed 225 SUPERFAMILY SSF54768 105 223 3.14E-24 T 11-10-2018 TVD_10925 177d2f2a72dc2683c4436d95ee25ceed 225 Gene3D G3DSA:3.30.160.20 150 225 2.3E-20 T 11-10-2018 TVD_10925 177d2f2a72dc2683c4436d95ee25ceed 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 5 216 28.092 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 TVD_10925 177d2f2a72dc2683c4436d95ee25ceed 225 Pfam PF14622 Ribonuclease-III-like 20 138 1.3E-30 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 TVD_10925 177d2f2a72dc2683c4436d95ee25ceed 225 Gene3D G3DSA:1.10.1520.10 2 142 2.7E-37 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 TVD_10925 177d2f2a72dc2683c4436d95ee25ceed 225 SUPERFAMILY SSF69065 6 155 1.53E-42 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 TVD_10925 177d2f2a72dc2683c4436d95ee25ceed 225 SMART SM00358 152 220 7.1E-17 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain TVD_10925 177d2f2a72dc2683c4436d95ee25ceed 225 ProSitePatterns PS00517 Ribonuclease III family signature. 34 42 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 TVD_10925 177d2f2a72dc2683c4436d95ee25ceed 225 Pfam PF00035 Double-stranded RNA binding motif 152 219 1.6E-12 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain TVD_03825 51c91bf0fb80d2a63c09559e838e1179 163 SUPERFAMILY SSF75169 38 161 4.71E-15 T 11-10-2018 IPR027396 DsrEFH-like TVD_03825 51c91bf0fb80d2a63c09559e838e1179 163 Gene3D G3DSA:3.40.1260.10 35 161 8.1E-11 T 11-10-2018 IPR027396 DsrEFH-like TVD_03825 51c91bf0fb80d2a63c09559e838e1179 163 Pfam PF02635 DsrE/DsrF-like family 61 160 1.3E-6 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_09905 9a576d0cbe7b6dcb44326ae7473da542 217 Pfam PF01227 GTP cyclohydrolase I 36 212 1.7E-75 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TVD_09905 9a576d0cbe7b6dcb44326ae7473da542 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 36 213 5.7E-74 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TVD_09905 9a576d0cbe7b6dcb44326ae7473da542 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 92 108 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TVD_09905 9a576d0cbe7b6dcb44326ae7473da542 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 31 213 38.868 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 TVD_09905 9a576d0cbe7b6dcb44326ae7473da542 217 SUPERFAMILY SSF55620 31 213 2.82E-78 T 11-10-2018 TVD_09905 9a576d0cbe7b6dcb44326ae7473da542 217 Gene3D G3DSA:3.30.1130.10 83 216 1.3E-60 T 11-10-2018 TVD_09905 9a576d0cbe7b6dcb44326ae7473da542 217 Gene3D G3DSA:1.10.286.10 31 82 2.6E-21 T 11-10-2018 TVD_00575 df9bc0baea3ed2c09841673a8cf0e3cb 320 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 25 316 1.7E-76 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 TVD_00575 df9bc0baea3ed2c09841673a8cf0e3cb 320 SMART SM00904 193 317 5.2E-54 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 TVD_00575 df9bc0baea3ed2c09841673a8cf0e3cb 320 Pfam PF01687 Riboflavin kinase 194 316 1.0E-33 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 TVD_00575 df9bc0baea3ed2c09841673a8cf0e3cb 320 Pfam PF06574 FAD synthetase 21 177 3.1E-45 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 TVD_00575 df9bc0baea3ed2c09841673a8cf0e3cb 320 Gene3D G3DSA:3.40.50.620 11 195 5.9E-52 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_00575 df9bc0baea3ed2c09841673a8cf0e3cb 320 Gene3D G3DSA:2.40.30.30 196 320 9.0E-38 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 TVD_00575 df9bc0baea3ed2c09841673a8cf0e3cb 320 PIRSF PIRSF004491 9 320 4.3E-90 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 TVD_00575 df9bc0baea3ed2c09841673a8cf0e3cb 320 SUPERFAMILY SSF82114 184 317 1.42E-40 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 TVD_00575 df9bc0baea3ed2c09841673a8cf0e3cb 320 SUPERFAMILY SSF52374 22 192 1.45E-28 T 11-10-2018 TVD_08795 431db88e07373155ce917713c998dbec 126 Gene3D G3DSA:3.30.56.110 5 126 2.6E-51 T 11-10-2018 TVD_08795 431db88e07373155ce917713c998dbec 126 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 7 121 5.9E-51 T 11-10-2018 IPR018714 Protein of unknown function DUF2237 TVD_11250 c0976d180d93ce25f56ad1e3839a4038 142 SMART SM00450 41 138 1.5E-23 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_11250 c0976d180d93ce25f56ad1e3839a4038 142 Pfam PF00581 Rhodanese-like domain 43 135 5.1E-19 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_11250 c0976d180d93ce25f56ad1e3839a4038 142 SUPERFAMILY SSF52821 21 141 2.1E-37 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_11250 c0976d180d93ce25f56ad1e3839a4038 142 Gene3D G3DSA:3.40.250.10 28 142 3.1E-32 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_07865 151a016ab7528a1794cfbe1f307c6ef8 630 SUPERFAMILY SSF64518 164 627 2.09E-40 T 11-10-2018 TVD_07865 151a016ab7528a1794cfbe1f307c6ef8 630 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 320 7.9E-76 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TVD_07865 151a016ab7528a1794cfbe1f307c6ef8 630 Pfam PF00460 Flagella basal body rod protein 7 33 2.4E-6 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TVD_07865 151a016ab7528a1794cfbe1f307c6ef8 630 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 10 30 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site TVD_07865 151a016ab7528a1794cfbe1f307c6ef8 630 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 566 625 3.3E-10 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TVD_07865 151a016ab7528a1794cfbe1f307c6ef8 630 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 5.9E-21 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TVD_07865 151a016ab7528a1794cfbe1f307c6ef8 630 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 5.9E-21 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TVD_07865 151a016ab7528a1794cfbe1f307c6ef8 630 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 5.9E-21 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TVD_07865 151a016ab7528a1794cfbe1f307c6ef8 630 PRINTS PR01005 Flagellar hook-associated protein signature 354 376 5.9E-21 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TVD_07865 151a016ab7528a1794cfbe1f307c6ef8 630 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 5.9E-21 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TVD_07865 151a016ab7528a1794cfbe1f307c6ef8 630 PRINTS PR01005 Flagellar hook-associated protein signature 212 230 5.9E-21 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TVD_07865 151a016ab7528a1794cfbe1f307c6ef8 630 PRINTS PR01005 Flagellar hook-associated protein signature 404 421 5.9E-21 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TVD_05835 1dc2cd73e1f44fb822bc7f108650e860 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 228 2.6E-76 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 TVD_05835 1dc2cd73e1f44fb822bc7f108650e860 321 Gene3D G3DSA:3.40.50.720 7 304 1.2E-108 T 11-10-2018 TVD_05835 1dc2cd73e1f44fb822bc7f108650e860 321 SUPERFAMILY SSF51735 2 316 9.65E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_05835 1dc2cd73e1f44fb822bc7f108650e860 321 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 315 48.984 T 11-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 TVD_05835 1dc2cd73e1f44fb822bc7f108650e860 321 Gene3D G3DSA:3.90.25.10 169 310 1.2E-108 T 11-10-2018 TVD_09805 4adf306d715312929a24f43bcddea48d 521 SUPERFAMILY SSF52540 61 285 1.91E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_09805 4adf306d715312929a24f43bcddea48d 521 Pfam PF00350 Dynamin family 64 231 2.5E-14 T 11-10-2018 IPR022812 Dynamin superfamily TVD_09805 4adf306d715312929a24f43bcddea48d 521 Gene3D G3DSA:3.40.50.300 64 310 4.4E-35 T 11-10-2018 TVD_01435 bf6581b04558eaebb91c00e9a337c00b 356 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01435 bf6581b04558eaebb91c00e9a337c00b 356 Pfam PF16074 Type IV Pilus-assembly protein W 237 353 9.3E-25 T 11-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 TVD_01435 bf6581b04558eaebb91c00e9a337c00b 356 SUPERFAMILY SSF54523 23 80 9.42E-5 T 11-10-2018 TVD_00810 4b7b1a8539ef7a210f25786c051919e1 187 Pfam PF02325 YGGT family 17 85 1.5E-15 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 TVD_00810 4b7b1a8539ef7a210f25786c051919e1 187 Pfam PF02325 YGGT family 111 183 8.4E-16 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 TVD_11570 737666ef6406a4d9095b5aa72df07655 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.0E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_11570 737666ef6406a4d9095b5aa72df07655 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.0E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_11570 737666ef6406a4d9095b5aa72df07655 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.0E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_11570 737666ef6406a4d9095b5aa72df07655 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.0E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_11570 737666ef6406a4d9095b5aa72df07655 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 6.0E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_11570 737666ef6406a4d9095b5aa72df07655 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 6.0E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_11570 737666ef6406a4d9095b5aa72df07655 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 187 7.6E-6 T 11-10-2018 TVD_11570 737666ef6406a4d9095b5aa72df07655 240 SUPERFAMILY SSF51735 4 237 5.07E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_11570 737666ef6406a4d9095b5aa72df07655 240 Gene3D G3DSA:3.40.50.720 2 240 1.1E-71 T 11-10-2018 TVD_11570 737666ef6406a4d9095b5aa72df07655 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 5.9E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_11570 737666ef6406a4d9095b5aa72df07655 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 5.9E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_11570 737666ef6406a4d9095b5aa72df07655 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 5.9E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_11570 737666ef6406a4d9095b5aa72df07655 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 237 5.8E-52 T 11-10-2018 TVD_10125 8aab0b5f258dfe5ee693ee100c3de039 245 Pfam PF00308 Bacterial dnaA protein 27 222 3.2E-18 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA TVD_10125 8aab0b5f258dfe5ee693ee100c3de039 245 Gene3D G3DSA:3.40.50.300 6 175 6.9E-30 T 11-10-2018 TVD_10125 8aab0b5f258dfe5ee693ee100c3de039 245 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 15 242 1.1E-71 T 11-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 TVD_10125 8aab0b5f258dfe5ee693ee100c3de039 245 SUPERFAMILY SSF52540 55 223 2.59E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_10125 8aab0b5f258dfe5ee693ee100c3de039 245 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 54 74 4.3E-6 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TVD_10125 8aab0b5f258dfe5ee693ee100c3de039 245 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 142 169 4.3E-6 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like TVD_10125 8aab0b5f258dfe5ee693ee100c3de039 245 Gene3D G3DSA:1.10.8.60 178 243 2.4E-22 T 11-10-2018 TVD_08645 294f07afcc6b9012f2fad0e7b7ab4de9 239 Pfam PF01814 Hemerythrin HHE cation binding domain 82 205 1.5E-12 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 TVD_08645 294f07afcc6b9012f2fad0e7b7ab4de9 239 Gene3D G3DSA:1.20.120.520 141 229 2.4E-6 T 11-10-2018 TVD_08645 294f07afcc6b9012f2fad0e7b7ab4de9 239 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 5 73 3.2E-12 T 11-10-2018 IPR018720 Domain of unknown function DUF2249 TVD_01685 736b7602282b21b7d793cd8117d49def 409 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 408 3.4E-155 T 11-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 TVD_01685 736b7602282b21b7d793cd8117d49def 409 Gene3D G3DSA:1.20.81.30 261 374 3.4E-30 T 11-10-2018 TVD_01685 736b7602282b21b7d793cd8117d49def 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 373 387 4.5E-34 T 11-10-2018 IPR003004 GspF/PilC family TVD_01685 736b7602282b21b7d793cd8117d49def 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 170 198 4.5E-34 T 11-10-2018 IPR003004 GspF/PilC family TVD_01685 736b7602282b21b7d793cd8117d49def 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 408 4.5E-34 T 11-10-2018 IPR003004 GspF/PilC family TVD_01685 736b7602282b21b7d793cd8117d49def 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 71 83 4.5E-34 T 11-10-2018 IPR003004 GspF/PilC family TVD_01685 736b7602282b21b7d793cd8117d49def 409 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 170 198 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 TVD_01685 736b7602282b21b7d793cd8117d49def 409 Pfam PF00482 Type II secretion system (T2SS), protein F 76 198 2.9E-30 T 11-10-2018 IPR018076 Type II secretion system F domain TVD_01685 736b7602282b21b7d793cd8117d49def 409 Pfam PF00482 Type II secretion system (T2SS), protein F 278 400 7.5E-31 T 11-10-2018 IPR018076 Type II secretion system F domain TVD_01685 736b7602282b21b7d793cd8117d49def 409 Gene3D G3DSA:1.20.81.30 66 176 3.4E-27 T 11-10-2018 TVD_08130 14aa6199b3bf553a4f1681227125903e 821 SUPERFAMILY SSF55073 378 535 2.35E-43 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_08130 14aa6199b3bf553a4f1681227125903e 821 SUPERFAMILY SSF53850 47 275 2.78E-12 T 11-10-2018 TVD_08130 14aa6199b3bf553a4f1681227125903e 821 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 370 532 1.2E-42 T 11-10-2018 IPR000160 GGDEF domain TVD_08130 14aa6199b3bf553a4f1681227125903e 821 SMART SM00267 362 534 6.1E-60 T 11-10-2018 IPR000160 GGDEF domain TVD_08130 14aa6199b3bf553a4f1681227125903e 821 Gene3D G3DSA:3.40.190.10 36 268 2.7E-20 T 11-10-2018 TVD_08130 14aa6199b3bf553a4f1681227125903e 821 SMART SM00052 544 790 4.2E-120 T 11-10-2018 IPR001633 EAL domain TVD_08130 14aa6199b3bf553a4f1681227125903e 821 Gene3D G3DSA:3.40.190.10 122 243 2.7E-20 T 11-10-2018 TVD_08130 14aa6199b3bf553a4f1681227125903e 821 Pfam PF00563 EAL domain 550 785 3.1E-75 T 11-10-2018 IPR001633 EAL domain TVD_08130 14aa6199b3bf553a4f1681227125903e 821 SUPERFAMILY SSF141868 549 798 1.07E-90 T 11-10-2018 IPR035919 EAL domain superfamily TVD_08130 14aa6199b3bf553a4f1681227125903e 821 Pfam PF00990 Diguanylate cyclase, GGDEF domain 374 530 8.6E-46 T 11-10-2018 IPR000160 GGDEF domain TVD_08130 14aa6199b3bf553a4f1681227125903e 821 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 36 284 3.0E-41 T 11-10-2018 TVD_08130 14aa6199b3bf553a4f1681227125903e 821 Gene3D G3DSA:3.30.70.270 367 547 1.1E-55 T 11-10-2018 TVD_08130 14aa6199b3bf553a4f1681227125903e 821 Gene3D G3DSA:3.20.20.450 548 798 5.5E-104 T 11-10-2018 IPR035919 EAL domain superfamily TVD_10245 eb9362af37282d150085a2e64f80d012 248 Gene3D G3DSA:3.40.50.880 1 236 8.6E-25 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_10245 eb9362af37282d150085a2e64f80d012 248 SUPERFAMILY SSF52317 5 191 1.49E-14 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_00380 d4205e445806e6ac10d37f9bc60a902f 97 Gene3D G3DSA:3.30.2310.20 1 97 2.4E-21 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_00380 d4205e445806e6ac10d37f9bc60a902f 97 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 5 97 1.3E-17 T 11-10-2018 IPR007711 Toxin HigB-1 TVD_00380 d4205e445806e6ac10d37f9bc60a902f 97 SUPERFAMILY SSF143011 1 97 9.42E-15 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily TVD_07930 be6bbfb9e7ea8f4d1cd607d8abfaa0f2 104 Pfam PF04316 Anti-sigma-28 factor, FlgM 45 98 5.7E-15 T 11-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal TVD_07930 be6bbfb9e7ea8f4d1cd607d8abfaa0f2 104 SUPERFAMILY SSF101498 29 99 2.35E-15 T 11-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily TVD_07930 be6bbfb9e7ea8f4d1cd607d8abfaa0f2 104 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 18 100 4.9E-19 T 11-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 TVD_04610 e27a4b8dea0bd0ec8981d753acc97d6b 235 Gene3D G3DSA:1.10.720.60 24 105 5.0E-24 T 11-10-2018 TVD_04610 e27a4b8dea0bd0ec8981d753acc97d6b 235 Gene3D G3DSA:3.40.50.1000 13 216 5.0E-24 T 11-10-2018 IPR023214 HAD superfamily TVD_04610 e27a4b8dea0bd0ec8981d753acc97d6b 235 SUPERFAMILY SSF56784 10 218 3.36E-25 T 11-10-2018 IPR036412 HAD-like superfamily TVD_13675 6f2c76d9c529d80f5fb970e6fb570b7f 94 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 4 93 2.4E-24 T 11-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ TVD_13675 6f2c76d9c529d80f5fb970e6fb570b7f 94 Gene3D G3DSA:2.60.40.10 1 94 1.5E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold TVD_13675 6f2c76d9c529d80f5fb970e6fb570b7f 94 SUPERFAMILY SSF81296 3 93 1.82E-15 T 11-10-2018 IPR014756 Immunoglobulin E-set TVD_13675 6f2c76d9c529d80f5fb970e6fb570b7f 94 Pfam PF08770 Sulphur oxidation protein SoxZ 5 91 6.9E-23 T 11-10-2018 IPR014880 Sulphur oxidation protein SoxZ TVD_02020 84a5c5e1b53c105d5673c29ad7966483 494 Gene3D G3DSA:3.30.470.20 366 482 3.0E-16 T 11-10-2018 TVD_02020 84a5c5e1b53c105d5673c29ad7966483 494 Pfam PF08443 RimK-like ATP-grasp domain 286 460 2.4E-10 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 TVD_02020 84a5c5e1b53c105d5673c29ad7966483 494 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 176 4.5E-46 T 11-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain TVD_02020 84a5c5e1b53c105d5673c29ad7966483 494 Gene3D G3DSA:3.30.1490.20 302 365 3.1E-10 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 TVD_02020 84a5c5e1b53c105d5673c29ad7966483 494 Gene3D G3DSA:3.40.50.20 213 301 5.7E-8 T 11-10-2018 TVD_02020 84a5c5e1b53c105d5673c29ad7966483 494 SUPERFAMILY SSF56059 277 477 2.05E-38 T 11-10-2018 TVD_08515 832429c7e6d660664d42d780e329e08d 66 Pfam PF10047 Protein of unknown function (DUF2281) 6 44 1.3E-7 T 11-10-2018 IPR018739 Domain of unknown function DUF2281 TVD_00390 74b2c867d34d039757d321cc6719b2ca 83 Gene3D G3DSA:1.10.1200.10 1 82 3.0E-21 T 11-10-2018 IPR036736 ACP-like superfamily TVD_00390 74b2c867d34d039757d321cc6719b2ca 83 Pfam PF00550 Phosphopantetheine attachment site 37 77 1.0E-5 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain TVD_00390 74b2c867d34d039757d321cc6719b2ca 83 SUPERFAMILY SSF47336 8 82 3.02E-11 T 11-10-2018 IPR036736 ACP-like superfamily TVD_10225 4bc052b3a62b16d2d3c86505c5c4169d 1303 Pfam PF13116 Protein of unknown function 497 771 3.3E-47 T 11-10-2018 IPR025263 Domain of unknown function DUF3971 TVD_10225 4bc052b3a62b16d2d3c86505c5c4169d 1303 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 4 1290 1.1E-178 T 11-10-2018 IPR011836 Conserved hypothetical protein CHP02099 TVD_10225 4bc052b3a62b16d2d3c86505c5c4169d 1303 Pfam PF13502 AsmA-like C-terminal region 1041 1286 6.5E-53 T 11-10-2018 IPR032712 AsmA-like, C-terminal TVD_08235 44a0917fdc8354b7e678a6f5dd72cb12 208 SUPERFAMILY SSF56925 27 208 2.88E-17 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TVD_08235 44a0917fdc8354b7e678a6f5dd72cb12 208 Pfam PF13505 Outer membrane protein beta-barrel domain 10 208 2.4E-24 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel TVD_01150 22c012800e865156ed928f153bc5cb8b 198 Pfam PF04367 Protein of unknown function (DUF502) 57 161 7.6E-27 T 11-10-2018 IPR007462 Protein of unknown function DUF502 TVD_03090 c195cfa0e993ba98df2132d20d32565b 180 SUPERFAMILY SSF56925 41 180 2.12E-10 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TVD_03090 c195cfa0e993ba98df2132d20d32565b 180 Gene3D G3DSA:2.40.160.20 28 180 3.9E-8 T 11-10-2018 TVD_02900 5b18556642ff7f66dd6e1b1b64f697a8 317 SUPERFAMILY SSF52151 5 309 8.89E-52 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase TVD_02900 5b18556642ff7f66dd6e1b1b64f697a8 317 Gene3D G3DSA:3.40.1090.10 1 109 8.0E-20 T 11-10-2018 TVD_02900 5b18556642ff7f66dd6e1b1b64f697a8 317 Pfam PF01734 Patatin-like phospholipase 10 169 2.9E-24 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 TVD_10620 04df23e2d2a689356fee439270088714 148 SUPERFAMILY SSF51230 8 114 2.04E-19 T 11-10-2018 IPR011053 Single hybrid motif TVD_10620 04df23e2d2a689356fee439270088714 148 Gene3D G3DSA:2.40.50.100 6 131 1.2E-25 T 11-10-2018 TVD_10620 04df23e2d2a689356fee439270088714 148 Pfam PF01597 Glycine cleavage H-protein 13 126 2.1E-28 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate TVD_00785 e8b45e09fd1539d099bf4bf0a76cb253 342 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 11 321 2.0E-125 T 11-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein TVD_00785 e8b45e09fd1539d099bf4bf0a76cb253 342 SUPERFAMILY SSF56059 44 283 8.08E-18 T 11-10-2018 TVD_00785 e8b45e09fd1539d099bf4bf0a76cb253 342 Pfam PF14397 Sugar-transfer associated ATP-grasp 25 298 6.5E-96 T 11-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 TVD_05710 4b1c623c41ae6b09ef6596a8cb840a1d 221 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 11 221 37.238 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 TVD_05710 4b1c623c41ae6b09ef6596a8cb840a1d 221 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 14 220 1.9E-66 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 TVD_05710 4b1c623c41ae6b09ef6596a8cb840a1d 221 SUPERFAMILY SSF53335 22 219 3.38E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_05710 4b1c623c41ae6b09ef6596a8cb840a1d 221 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 141 156 - T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 TVD_05710 4b1c623c41ae6b09ef6596a8cb840a1d 221 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 17 215 1.6E-59 T 11-10-2018 TVD_05710 4b1c623c41ae6b09ef6596a8cb840a1d 221 Gene3D G3DSA:3.40.50.150 6 220 5.4E-73 T 11-10-2018 TVD_08730 edf2059271165dea6913fb5e823e6334 157 Pfam PF04073 Aminoacyl-tRNA editing domain 23 142 2.6E-26 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TVD_08730 edf2059271165dea6913fb5e823e6334 157 SUPERFAMILY SSF55826 8 146 1.23E-31 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TVD_08730 edf2059271165dea6913fb5e823e6334 157 Gene3D G3DSA:3.90.960.10 5 147 1.1E-41 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 TVD_12910 5291174ea06dee4378a4fb6f1114cdbf 168 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 162 5.0E-45 T 11-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 TVD_12910 5291174ea06dee4378a4fb6f1114cdbf 168 SMART SM00738 1 100 2.5E-12 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TVD_12910 5291174ea06dee4378a4fb6f1114cdbf 168 Gene3D G3DSA:3.30.70.940 1 165 5.8E-48 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TVD_12910 5291174ea06dee4378a4fb6f1114cdbf 168 SUPERFAMILY SSF82679 2 102 3.01E-26 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TVD_12910 5291174ea06dee4378a4fb6f1114cdbf 168 Pfam PF02357 Transcription termination factor nusG 2 96 3.1E-20 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 TVD_01935 a7742bc34d0331225d944cecd434642c 260 Pfam PF02405 Permease MlaE 45 253 1.7E-75 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 TVD_01935 a7742bc34d0331225d944cecd434642c 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 4 257 1.8E-85 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria TVD_00420 f61694c7f40f99dc16b2fc2ea424c77e 600 ProSitePatterns PS00211 ABC transporters family signature. 501 515 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_00420 f61694c7f40f99dc16b2fc2ea424c77e 600 Gene3D G3DSA:3.40.50.300 356 598 7.4E-80 T 11-10-2018 TVD_00420 f61694c7f40f99dc16b2fc2ea424c77e 600 SUPERFAMILY SSF90123 10 321 2.35E-30 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TVD_00420 f61694c7f40f99dc16b2fc2ea424c77e 600 SMART SM00382 386 574 2.9E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_00420 f61694c7f40f99dc16b2fc2ea424c77e 600 Pfam PF00005 ABC transporter 377 529 3.2E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_00420 f61694c7f40f99dc16b2fc2ea424c77e 600 Gene3D G3DSA:1.20.1560.10 10 335 7.2E-24 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 TVD_00420 f61694c7f40f99dc16b2fc2ea424c77e 600 SUPERFAMILY SSF52540 350 596 8.32E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_00420 f61694c7f40f99dc16b2fc2ea424c77e 600 Pfam PF00664 ABC transporter transmembrane region 22 282 4.7E-13 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 TVD_11615 e5af6e7d1791535abc92b32325a52d1a 347 TIGRFAM TIGR00238 TIGR00238: KamA family protein 19 333 2.7E-96 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase TVD_11615 e5af6e7d1791535abc92b32325a52d1a 347 PIRSF PIRSF004911 5 345 8.8E-112 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase TVD_11615 e5af6e7d1791535abc92b32325a52d1a 347 Pfam PF13353 4Fe-4S single cluster domain 117 184 5.9E-5 T 11-10-2018 TVD_11615 e5af6e7d1791535abc92b32325a52d1a 347 SUPERFAMILY SSF102114 108 329 1.83E-27 T 11-10-2018 TVD_11615 e5af6e7d1791535abc92b32325a52d1a 347 Pfam PF04055 Radical SAM superfamily 121 257 7.3E-7 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TVD_11615 e5af6e7d1791535abc92b32325a52d1a 347 Gene3D G3DSA:3.20.20.70 54 339 1.0E-91 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_11615 e5af6e7d1791535abc92b32325a52d1a 347 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 20 339 5.9E-134 T 11-10-2018 IPR022462 Lysine-2,3-aminomutase-like TVD_05440 4b406d90b46e99899461d94e1e9fbf34 406 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 72 303 7.5E-26 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TVD_05440 4b406d90b46e99899461d94e1e9fbf34 406 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 387 7.4E-56 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TVD_05440 4b406d90b46e99899461d94e1e9fbf34 406 Gene3D G3DSA:2.40.420.20 56 374 7.6E-66 T 11-10-2018 TVD_05440 4b406d90b46e99899461d94e1e9fbf34 406 Gene3D G3DSA:2.40.50.100 71 234 7.6E-66 T 11-10-2018 TVD_05440 4b406d90b46e99899461d94e1e9fbf34 406 SUPERFAMILY SSF111369 62 310 6.93E-27 T 11-10-2018 TVD_05440 4b406d90b46e99899461d94e1e9fbf34 406 Gene3D G3DSA:2.40.30.170 60 310 7.6E-66 T 11-10-2018 TVD_05440 4b406d90b46e99899461d94e1e9fbf34 406 Gene3D G3DSA:1.10.287.470 105 196 7.6E-66 T 11-10-2018 TVD_04035 2aa5cec1c1fe8f62f5fb0827c71f77ab 249 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 165 242 2.1E-33 T 11-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 TVD_04035 2aa5cec1c1fe8f62f5fb0827c71f77ab 249 Pfam PF08534 Redoxin 7 161 1.5E-33 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 TVD_04035 2aa5cec1c1fe8f62f5fb0827c71f77ab 249 Gene3D G3DSA:3.40.30.10 5 166 3.2E-61 T 11-10-2018 TVD_04035 2aa5cec1c1fe8f62f5fb0827c71f77ab 249 SUPERFAMILY SSF52833 6 242 4.23E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_04035 2aa5cec1c1fe8f62f5fb0827c71f77ab 249 ProSitePatterns PS00195 Glutaredoxin active site. 176 192 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 TVD_04035 2aa5cec1c1fe8f62f5fb0827c71f77ab 249 PRINTS PR00160 Glutaredoxin signature 215 228 2.1E-13 T 11-10-2018 IPR014025 Glutaredoxin subgroup TVD_04035 2aa5cec1c1fe8f62f5fb0827c71f77ab 249 PRINTS PR00160 Glutaredoxin signature 174 192 2.1E-13 T 11-10-2018 IPR014025 Glutaredoxin subgroup TVD_04035 2aa5cec1c1fe8f62f5fb0827c71f77ab 249 PRINTS PR00160 Glutaredoxin signature 229 242 2.1E-13 T 11-10-2018 IPR014025 Glutaredoxin subgroup TVD_04035 2aa5cec1c1fe8f62f5fb0827c71f77ab 249 Gene3D G3DSA:3.40.30.10 172 243 7.5E-23 T 11-10-2018 TVD_04035 2aa5cec1c1fe8f62f5fb0827c71f77ab 249 Pfam PF00462 Glutaredoxin 174 231 3.8E-17 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 TVD_03700 ca9a2e04f13da04fcdfbc693bce77f82 205 Pfam PF08241 Methyltransferase domain 45 140 3.4E-22 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TVD_03700 ca9a2e04f13da04fcdfbc693bce77f82 205 Gene3D G3DSA:3.40.50.150 13 183 2.2E-33 T 11-10-2018 TVD_03700 ca9a2e04f13da04fcdfbc693bce77f82 205 SUPERFAMILY SSF53335 6 176 2.5E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_08505 89f9dfd4aa7d9455ae4e2f7ed20160fa 183 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 50 72 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TVD_08505 89f9dfd4aa7d9455ae4e2f7ed20160fa 183 PIRSF PIRSF000847 1 183 5.2E-43 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 TVD_08505 89f9dfd4aa7d9455ae4e2f7ed20160fa 183 Gene3D G3DSA:1.20.120.1760 3 182 7.9E-15 T 11-10-2018 TVD_08505 89f9dfd4aa7d9455ae4e2f7ed20160fa 183 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 2.6E-56 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 TVD_08505 89f9dfd4aa7d9455ae4e2f7ed20160fa 183 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 72 1.2E-15 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TVD_09100 da226f2a9a5fa4c2a26ec8a5c5b945da 275 Gene3D G3DSA:3.30.450.20 1 104 3.1E-14 T 11-10-2018 TVD_09100 da226f2a9a5fa4c2a26ec8a5c5b945da 275 Pfam PF08448 PAS fold 3 107 3.6E-7 T 11-10-2018 IPR013656 PAS fold-4 TVD_09100 da226f2a9a5fa4c2a26ec8a5c5b945da 275 SMART SM00091 1 62 0.0053 T 11-10-2018 IPR000014 PAS domain TVD_09100 da226f2a9a5fa4c2a26ec8a5c5b945da 275 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 114 273 1.4E-45 T 11-10-2018 IPR000160 GGDEF domain TVD_09100 da226f2a9a5fa4c2a26ec8a5c5b945da 275 Gene3D G3DSA:3.30.70.270 105 275 5.1E-56 T 11-10-2018 TVD_09100 da226f2a9a5fa4c2a26ec8a5c5b945da 275 SUPERFAMILY SSF55785 10 114 4.71E-18 T 11-10-2018 IPR035965 PAS domain superfamily TVD_09100 da226f2a9a5fa4c2a26ec8a5c5b945da 275 SMART SM00267 107 275 9.0E-65 T 11-10-2018 IPR000160 GGDEF domain TVD_09100 da226f2a9a5fa4c2a26ec8a5c5b945da 275 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 5 114 6.6E-12 T 11-10-2018 IPR000014 PAS domain TVD_09100 da226f2a9a5fa4c2a26ec8a5c5b945da 275 SUPERFAMILY SSF55073 123 273 1.8E-44 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_09100 da226f2a9a5fa4c2a26ec8a5c5b945da 275 Pfam PF00990 Diguanylate cyclase, GGDEF domain 118 271 5.4E-45 T 11-10-2018 IPR000160 GGDEF domain TVD_11605 08cd1dd25eb15a958a5c78cba2169ba1 319 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 220 7.0E-10 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TVD_11605 08cd1dd25eb15a958a5c78cba2169ba1 319 PRINTS PR00982 Lysyl-tRNA synthetase signature 72 85 7.0E-10 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TVD_11605 08cd1dd25eb15a958a5c78cba2169ba1 319 PRINTS PR00982 Lysyl-tRNA synthetase signature 90 107 7.0E-10 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TVD_11605 08cd1dd25eb15a958a5c78cba2169ba1 319 PRINTS PR00982 Lysyl-tRNA synthetase signature 27 37 7.0E-10 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 TVD_11605 08cd1dd25eb15a958a5c78cba2169ba1 319 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 316 1.2E-101 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 TVD_11605 08cd1dd25eb15a958a5c78cba2169ba1 319 SUPERFAMILY SSF55681 13 318 7.57E-61 T 11-10-2018 TVD_11605 08cd1dd25eb15a958a5c78cba2169ba1 319 Gene3D G3DSA:3.30.930.10 5 319 5.0E-78 T 11-10-2018 TVD_11605 08cd1dd25eb15a958a5c78cba2169ba1 319 Pfam PF00152 tRNA synthetases class II (D, K and N) 206 317 1.3E-13 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_11605 08cd1dd25eb15a958a5c78cba2169ba1 319 Pfam PF00152 tRNA synthetases class II (D, K and N) 14 116 6.1E-11 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 TVD_07375 7c7e9ffc40385016c98f3bde9d465409 769 Pfam PF11842 Domain of unknown function (DUF3362) 597 722 3.9E-48 T 11-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal TVD_07375 7c7e9ffc40385016c98f3bde9d465409 769 SUPERFAMILY SSF102114 363 617 4.71E-12 T 11-10-2018 TVD_07375 7c7e9ffc40385016c98f3bde9d465409 769 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 650 49.618 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 TVD_07375 7c7e9ffc40385016c98f3bde9d465409 769 Gene3D G3DSA:3.80.30.20 378 630 5.7E-14 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TVD_07375 7c7e9ffc40385016c98f3bde9d465409 769 Pfam PF08497 Radical SAM N-terminal 24 382 3.1E-143 T 11-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal TVD_07375 7c7e9ffc40385016c98f3bde9d465409 769 Pfam PF04055 Radical SAM superfamily 383 588 3.2E-22 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TVD_07375 7c7e9ffc40385016c98f3bde9d465409 769 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 383 403 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 TVD_07375 7c7e9ffc40385016c98f3bde9d465409 769 SMART SM00729 379 629 1.8E-7 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TVD_07375 7c7e9ffc40385016c98f3bde9d465409 769 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 648 2.0E-258 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 TVD_00915 c517bb218cd5e342ca45ac64a530bdfd 264 SUPERFAMILY SSF53474 27 261 2.58E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_00915 c517bb218cd5e342ca45ac64a530bdfd 264 Gene3D G3DSA:3.40.50.1820 19 263 4.4E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_00915 c517bb218cd5e342ca45ac64a530bdfd 264 Pfam PF01738 Dienelactone hydrolase family 41 261 6.8E-41 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 TVD_00690 e54f3689287e15bad73ba2636051ba75 283 SUPERFAMILY SSF52540 14 236 2.66E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01675 ed0d42d31bbb70cf63eab59f53afdd85 190 PRINTS PR00885 Bacterial general secretion pathway protein H signature 129 144 5.6E-7 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 TVD_01675 ed0d42d31bbb70cf63eab59f53afdd85 190 PRINTS PR00885 Bacterial general secretion pathway protein H signature 21 35 5.6E-7 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 TVD_01675 ed0d42d31bbb70cf63eab59f53afdd85 190 PRINTS PR00885 Bacterial general secretion pathway protein H signature 6 20 5.6E-7 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 TVD_01675 ed0d42d31bbb70cf63eab59f53afdd85 190 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 30 2.0E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01675 ed0d42d31bbb70cf63eab59f53afdd85 190 SUPERFAMILY SSF54523 11 79 1.49E-12 T 11-10-2018 TVD_01675 ed0d42d31bbb70cf63eab59f53afdd85 190 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 29 1.5E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01675 ed0d42d31bbb70cf63eab59f53afdd85 190 Gene3D G3DSA:3.55.40.10 39 167 5.0E-10 T 11-10-2018 TVD_01675 ed0d42d31bbb70cf63eab59f53afdd85 190 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 9 152 9.9E-16 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 TVD_08360 29ac05eea07507087791735ea4b83a11 555 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 323 551 2.1E-14 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TVD_08360 29ac05eea07507087791735ea4b83a11 555 SUPERFAMILY SSF161098 278 537 1.7E-33 T 11-10-2018 IPR035906 MetI-like superfamily TVD_08360 29ac05eea07507087791735ea4b83a11 555 Gene3D G3DSA:1.10.3720.10 301 547 1.2E-27 T 11-10-2018 IPR035906 MetI-like superfamily TVD_08360 29ac05eea07507087791735ea4b83a11 555 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 286 546 6.3E-71 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 TVD_09530 35bfe7903a9be83e3910e6183d6d3849 257 Pfam PF06966 Protein of unknown function (DUF1295) 21 247 8.8E-58 T 11-10-2018 IPR010721 Protein of unknown function DUF1295 TVD_09530 35bfe7903a9be83e3910e6183d6d3849 257 Gene3D G3DSA:1.20.120.1630 71 253 5.9E-13 T 11-10-2018 TVD_04090 a6b2f975fd357fd2b7d0bab506cb3ca3 463 PRINTS PR00175 Sodium/alanine symporter signature 314 332 1.6E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TVD_04090 a6b2f975fd357fd2b7d0bab506cb3ca3 463 PRINTS PR00175 Sodium/alanine symporter signature 195 213 1.6E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TVD_04090 a6b2f975fd357fd2b7d0bab506cb3ca3 463 PRINTS PR00175 Sodium/alanine symporter signature 223 242 1.6E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TVD_04090 a6b2f975fd357fd2b7d0bab506cb3ca3 463 PRINTS PR00175 Sodium/alanine symporter signature 361 383 1.6E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TVD_04090 a6b2f975fd357fd2b7d0bab506cb3ca3 463 PRINTS PR00175 Sodium/alanine symporter signature 94 116 1.6E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TVD_04090 a6b2f975fd357fd2b7d0bab506cb3ca3 463 PRINTS PR00175 Sodium/alanine symporter signature 420 440 1.6E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TVD_04090 a6b2f975fd357fd2b7d0bab506cb3ca3 463 Pfam PF01235 Sodium:alanine symporter family 61 455 2.1E-137 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TVD_04090 a6b2f975fd357fd2b7d0bab506cb3ca3 463 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 94 109 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TVD_04090 a6b2f975fd357fd2b7d0bab506cb3ca3 463 TIGRFAM TIGR00835 agcS: amino acid carrier protein 22 451 4.1E-144 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TVD_05875 5acbcd4caef6c5ca335c0c8df5b817d5 376 PIRSF PIRSF003085 2 375 6.2E-101 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 TVD_05875 5acbcd4caef6c5ca335c0c8df5b817d5 376 Pfam PF02353 Mycolic acid cyclopropane synthetase 94 362 2.0E-76 T 11-10-2018 TVD_05875 5acbcd4caef6c5ca335c0c8df5b817d5 376 Gene3D G3DSA:3.40.50.150 87 366 1.6E-83 T 11-10-2018 TVD_05875 5acbcd4caef6c5ca335c0c8df5b817d5 376 SUPERFAMILY SSF53335 103 365 2.73E-67 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_09675 c5c4f13b840f3bf1eddbdcf0436b6fef 184 Gene3D G3DSA:2.60.40.1890 47 158 9.2E-38 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily TVD_09675 c5c4f13b840f3bf1eddbdcf0436b6fef 184 Pfam PF04314 Copper chaperone PCu(A)C 45 147 1.5E-36 T 11-10-2018 IPR007410 Copper chaperone PCuAC TVD_09675 c5c4f13b840f3bf1eddbdcf0436b6fef 184 SUPERFAMILY SSF110087 44 154 4.05E-42 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily TVD_06670 4782b84cea7acb329d16f2db395c161f 250 Pfam PF01048 Phosphorylase superfamily 5 246 2.9E-45 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 TVD_06670 4782b84cea7acb329d16f2db395c161f 250 Gene3D G3DSA:3.40.50.1580 1 250 5.6E-81 T 11-10-2018 TVD_06670 4782b84cea7acb329d16f2db395c161f 250 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 6 247 6.2E-84 T 11-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 TVD_06670 4782b84cea7acb329d16f2db395c161f 250 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 4 250 34.254 T 11-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 TVD_06670 4782b84cea7acb329d16f2db395c161f 250 SUPERFAMILY SSF53167 4 249 5.15E-80 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 TVD_10895 79af0501d9bcac97a102ec92d7437f40 294 Gene3D G3DSA:3.30.479.30 47 183 1.1E-21 T 11-10-2018 TVD_10895 79af0501d9bcac97a102ec92d7437f40 294 TIGRFAM TIGR01932 hflC: HflC protein 142 280 1.4E-42 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 TVD_10895 79af0501d9bcac97a102ec92d7437f40 294 SUPERFAMILY SSF117892 50 187 3.01E-28 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily TVD_10895 79af0501d9bcac97a102ec92d7437f40 294 SMART SM00244 18 181 1.3E-31 T 11-10-2018 IPR001107 Band 7 domain TVD_10895 79af0501d9bcac97a102ec92d7437f40 294 PIRSF PIRSF005651 1 288 1.1E-90 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 TVD_10895 79af0501d9bcac97a102ec92d7437f40 294 Pfam PF01145 SPFH domain / Band 7 family 22 197 7.7E-27 T 11-10-2018 IPR001107 Band 7 domain TVD_04465 75e1bbed85829c9a6661b92486265dce 766 Pfam PF00361 Proton-conducting membrane transporter 124 410 1.1E-58 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_04465 75e1bbed85829c9a6661b92486265dce 766 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 58 111 3.4E-12 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_04465 75e1bbed85829c9a6661b92486265dce 766 Pfam PF13244 Domain of unknown function (DUF4040) 606 669 1.6E-16 T 11-10-2018 IPR025383 Domain of unknown function DUF4040 TVD_04465 75e1bbed85829c9a6661b92486265dce 766 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 4.1E-33 T 11-10-2018 TVD_04465 75e1bbed85829c9a6661b92486265dce 766 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 304 316 4.1E-33 T 11-10-2018 TVD_04465 75e1bbed85829c9a6661b92486265dce 766 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 101 121 4.1E-33 T 11-10-2018 TVD_04465 75e1bbed85829c9a6661b92486265dce 766 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 214 235 4.1E-33 T 11-10-2018 TVD_04465 75e1bbed85829c9a6661b92486265dce 766 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 236 262 4.1E-33 T 11-10-2018 TVD_13360 ebbdd8b85dd6b16807c09d2944ed7019 278 Gene3D G3DSA:3.60.40.10 1 240 2.9E-49 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_13360 ebbdd8b85dd6b16807c09d2944ed7019 278 SMART SM00331 14 240 9.3E-7 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_13360 ebbdd8b85dd6b16807c09d2944ed7019 278 SUPERFAMILY SSF81606 2 235 7.85E-45 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_13360 ebbdd8b85dd6b16807c09d2944ed7019 278 SMART SM00332 2 238 7.6E-5 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_13360 ebbdd8b85dd6b16807c09d2944ed7019 278 Pfam PF13672 Protein phosphatase 2C 12 195 6.9E-12 T 11-10-2018 TVD_06705 572a5058672bdc4235abfc24211ce8cc 344 Pfam PF02618 YceG-like family 43 327 7.0E-80 T 11-10-2018 IPR003770 Endolytic murein transglycosylase TVD_06705 572a5058672bdc4235abfc24211ce8cc 344 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 6 332 32.728 T 11-10-2018 IPR003770 Endolytic murein transglycosylase TVD_06705 572a5058672bdc4235abfc24211ce8cc 344 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 330 5.9E-76 T 11-10-2018 IPR003770 Endolytic murein transglycosylase TVD_06705 572a5058672bdc4235abfc24211ce8cc 344 Gene3D G3DSA:3.30.160.60 304 333 6.9E-7 T 11-10-2018 TVD_06705 572a5058672bdc4235abfc24211ce8cc 344 Gene3D G3DSA:1.10.8.1150 40 112 7.6E-7 T 11-10-2018 TVD_03890 ff88d618cad8805d05332e9c8b3cabb6 544 Gene3D G3DSA:1.10.287.950 213 544 7.2E-81 T 11-10-2018 TVD_03890 ff88d618cad8805d05332e9c8b3cabb6 544 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 180 3.2E-15 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain TVD_03890 ff88d618cad8805d05332e9c8b3cabb6 544 SUPERFAMILY SSF58104 234 542 1.44E-81 T 11-10-2018 TVD_03890 ff88d618cad8805d05332e9c8b3cabb6 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 510 6.9E-45 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_03890 ff88d618cad8805d05332e9c8b3cabb6 544 SMART SM00283 281 542 4.1E-82 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_03890 ff88d618cad8805d05332e9c8b3cabb6 544 SMART SM00304 269 319 41.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_03890 ff88d618cad8805d05332e9c8b3cabb6 544 SMART SM00304 213 266 9.4E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_03890 ff88d618cad8805d05332e9c8b3cabb6 544 Pfam PF00672 HAMP domain 213 261 2.0E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 TVD_03890 ff88d618cad8805d05332e9c8b3cabb6 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 190 210 8.3E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_03890 ff88d618cad8805d05332e9c8b3cabb6 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 8.3E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_03890 ff88d618cad8805d05332e9c8b3cabb6 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 406 8.3E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_00655 28fe5bc94357ca39462d1fde06020929 104 Pfam PF13466 STAS domain 4 81 1.9E-14 T 11-10-2018 IPR002645 STAS domain TVD_00655 28fe5bc94357ca39462d1fde06020929 104 Gene3D G3DSA:3.30.750.24 1 93 5.8E-11 T 11-10-2018 IPR036513 STAS domain superfamily TVD_00655 28fe5bc94357ca39462d1fde06020929 104 SUPERFAMILY SSF52091 4 82 9.81E-9 T 11-10-2018 IPR036513 STAS domain superfamily TVD_10610 b2025e64209f0e7e83de9103d1070e36 132 Gene3D G3DSA:2.40.50.100 1 123 4.6E-35 T 11-10-2018 TVD_10610 b2025e64209f0e7e83de9103d1070e36 132 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 125 30.625 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 TVD_10610 b2025e64209f0e7e83de9103d1070e36 132 Pfam PF01597 Glycine cleavage H-protein 2 119 1.2E-38 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate TVD_10610 b2025e64209f0e7e83de9103d1070e36 132 SUPERFAMILY SSF51230 2 113 9.95E-31 T 11-10-2018 IPR011053 Single hybrid motif TVD_07715 b7aa980a091e3707a8c273d21feec7f8 202 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 88 157 8.7E-8 T 11-10-2018 IPR000014 PAS domain TVD_07715 b7aa980a091e3707a8c273d21feec7f8 202 SUPERFAMILY SSF55785 76 160 6.47E-11 T 11-10-2018 IPR035965 PAS domain superfamily TVD_07715 b7aa980a091e3707a8c273d21feec7f8 202 Pfam PF13188 PAS domain 89 135 1.7E-6 T 11-10-2018 IPR000014 PAS domain TVD_07715 b7aa980a091e3707a8c273d21feec7f8 202 Gene3D G3DSA:3.30.450.20 73 196 5.3E-10 T 11-10-2018 TVD_07715 b7aa980a091e3707a8c273d21feec7f8 202 SMART SM00091 89 155 0.0072 T 11-10-2018 IPR000014 PAS domain TVD_05650 b90f75b19a92a58101071c510c852560 130 Pfam PF00877 NlpC/P60 family 24 123 4.1E-26 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain TVD_05650 b90f75b19a92a58101071c510c852560 130 SUPERFAMILY SSF54001 9 129 1.34E-35 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TVD_05650 b90f75b19a92a58101071c510c852560 130 Gene3D G3DSA:3.90.1720.10 1 123 7.4E-35 T 11-10-2018 TVD_10235 6e7d218573dc3aff00fbe6d0c87c320b 369 Pfam PF01594 AI-2E family transporter 19 345 6.2E-69 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like TVD_11240 4167fa77265027682eca4eee43194133 393 Gene3D G3DSA:2.70.70.10 256 390 3.5E-28 T 11-10-2018 IPR011055 Duplicated hybrid motif TVD_11240 4167fa77265027682eca4eee43194133 393 Pfam PF01551 Peptidase family M23 293 386 1.0E-21 T 11-10-2018 IPR016047 Peptidase M23 TVD_11240 4167fa77265027682eca4eee43194133 393 SUPERFAMILY SSF51261 203 389 1.15E-34 T 11-10-2018 IPR011055 Duplicated hybrid motif TVD_06345 59e9dc65ae2a19db90997f981d08707c 258 Pfam PF04344 Chemotaxis phosphatase, CheZ 45 258 1.3E-71 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 TVD_06345 59e9dc65ae2a19db90997f981d08707c 258 Gene3D G3DSA:1.10.287.500 65 197 6.4E-43 T 11-10-2018 TVD_06345 59e9dc65ae2a19db90997f981d08707c 258 SUPERFAMILY SSF75708 34 257 1.1E-56 T 11-10-2018 TVD_06345 59e9dc65ae2a19db90997f981d08707c 258 PIRSF PIRSF002884 22 258 2.0E-68 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 TVD_12835 ef3066f6f084d24cd8bc63b566f965ea 466 SUPERFAMILY SSF54862 91 342 5.86E-27 T 11-10-2018 TVD_12835 ef3066f6f084d24cd8bc63b566f965ea 466 Pfam PF13746 4Fe-4S dicluster domain 205 318 3.0E-50 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TVD_12835 ef3066f6f084d24cd8bc63b566f965ea 466 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 265 276 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_12835 ef3066f6f084d24cd8bc63b566f965ea 466 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 348 463 4.3E-21 T 11-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain TVD_12835 ef3066f6f084d24cd8bc63b566f965ea 466 Pfam PF12801 4Fe-4S binding domain 150 170 380.0 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TVD_12835 ef3066f6f084d24cd8bc63b566f965ea 466 Pfam PF12801 4Fe-4S binding domain 81 123 2.0E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TVD_12835 ef3066f6f084d24cd8bc63b566f965ea 466 Gene3D G3DSA:2.60.40.10 349 466 1.5E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold TVD_12835 ef3066f6f084d24cd8bc63b566f965ea 466 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 23 441 5.5E-136 T 11-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 TVD_03710 66fd96c6a871aed1ee10d9f9cf74e4d6 482 Pfam PF14403 Circularly permuted ATP-grasp type 2 80 456 7.2E-164 T 11-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 TVD_03710 66fd96c6a871aed1ee10d9f9cf74e4d6 482 PIRSF PIRSF005522 1 482 1.2E-223 T 11-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 TVD_03710 66fd96c6a871aed1ee10d9f9cf74e4d6 482 Gene3D G3DSA:3.40.50.11290 219 316 2.5E-40 T 11-10-2018 TVD_03710 66fd96c6a871aed1ee10d9f9cf74e4d6 482 SUPERFAMILY SSF56059 24 471 1.88E-64 T 11-10-2018 TVD_03710 66fd96c6a871aed1ee10d9f9cf74e4d6 482 Gene3D G3DSA:3.30.1490.270 353 413 1.1E-27 T 11-10-2018 TVD_03110 e7de6014e330819a10fb97724fdf1db8 179 SUPERFAMILY SSF58113 39 159 1.07E-6 T 11-10-2018 TVD_03110 e7de6014e330819a10fb97724fdf1db8 179 Gene3D G3DSA:1.20.120.20 26 118 2.3E-5 T 11-10-2018 TVD_02140 5d2c1ba5648163e74f923db0a152768d 308 SUPERFAMILY SSF53335 6 308 5.79E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_02140 5d2c1ba5648163e74f923db0a152768d 308 PIRSF PIRSF004486 1 308 1.4E-99 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TVD_02140 5d2c1ba5648163e74f923db0a152768d 308 SUPERFAMILY SSF81799 114 213 3.66E-37 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 TVD_02140 5d2c1ba5648163e74f923db0a152768d 308 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 6 308 37.935 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TVD_02140 5d2c1ba5648163e74f923db0a152768d 308 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 307 1.1E-108 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TVD_02140 5d2c1ba5648163e74f923db0a152768d 308 Pfam PF01795 MraW methylase family 4 307 8.8E-106 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 TVD_02140 5d2c1ba5648163e74f923db0a152768d 308 Gene3D G3DSA:3.40.50.150 9 307 4.4E-101 T 11-10-2018 TVD_02140 5d2c1ba5648163e74f923db0a152768d 308 Gene3D G3DSA:1.10.150.170 112 214 4.4E-101 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 TVD_12465 bd2341e2c17ae820ae45979aad2315e8 213 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 11 213 26.355 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 TVD_12465 bd2341e2c17ae820ae45979aad2315e8 213 SUPERFAMILY SSF47240 51 185 2.8E-16 T 11-10-2018 IPR009078 Ferritin-like superfamily TVD_12465 bd2341e2c17ae820ae45979aad2315e8 213 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 51 213 7.3E-40 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 TVD_09575 ec8a331ccc9cf9727d67654568d4fab1 286 Gene3D G3DSA:1.10.620.20 25 270 4.9E-9 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 TVD_09575 ec8a331ccc9cf9727d67654568d4fab1 286 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 5 278 1.3E-44 T 11-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF TVD_09575 ec8a331ccc9cf9727d67654568d4fab1 286 SUPERFAMILY SSF47240 26 241 7.62E-12 T 11-10-2018 IPR009078 Ferritin-like superfamily TVD_01585 41edb199d5f97c3da316abf1ffb9d0e8 196 SUPERFAMILY SSF110997 118 194 8.5E-17 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TVD_01585 41edb199d5f97c3da316abf1ffb9d0e8 196 Gene3D G3DSA:3.30.70.1070 116 196 6.9E-16 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TVD_01585 41edb199d5f97c3da316abf1ffb9d0e8 196 Pfam PF05036 Sporulation related domain 121 187 3.6E-15 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 TVD_03520 4a398226a62da61c736b63f82bf1c877 387 Pfam PF12832 MFS_1 like family 8 360 1.0E-98 T 11-10-2018 IPR024989 Major facilitator superfamily associated domain TVD_03520 4a398226a62da61c736b63f82bf1c877 387 Gene3D G3DSA:1.20.1250.20 192 378 1.7E-40 T 11-10-2018 TVD_03520 4a398226a62da61c736b63f82bf1c877 387 Gene3D G3DSA:1.20.1250.20 5 186 1.2E-24 T 11-10-2018 TVD_03520 4a398226a62da61c736b63f82bf1c877 387 SUPERFAMILY SSF103473 9 379 1.31E-48 T 11-10-2018 IPR036259 MFS transporter superfamily TVD_03520 4a398226a62da61c736b63f82bf1c877 387 PIRSF PIRSF004925 1 384 2.8E-104 T 11-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter TVD_00815 1a8974de3242bcaee5cd5af04e78ff4d 150 Gene3D G3DSA:2.60.40.3340 23 150 3.7E-36 T 11-10-2018 TVD_00815 1a8974de3242bcaee5cd5af04e78ff4d 150 Pfam PF14467 Domain of unknown function (DUF4426) 31 150 1.8E-43 T 11-10-2018 IPR025218 Domain of unknown function DUF4426 TVD_05560 d55c5a4a9e568642f307fd6ac216b24a 684 SMART SM00460 407 478 1.1E-19 T 11-10-2018 IPR002931 Transglutaminase-like TVD_05560 d55c5a4a9e568642f307fd6ac216b24a 684 Pfam PF11992 Domain of unknown function (DUF3488) 19 326 2.8E-98 T 11-10-2018 IPR021878 Protein of unknown function DUF3488 TVD_05560 d55c5a4a9e568642f307fd6ac216b24a 684 Pfam PF01841 Transglutaminase-like superfamily 377 476 2.6E-24 T 11-10-2018 IPR002931 Transglutaminase-like TVD_05560 d55c5a4a9e568642f307fd6ac216b24a 684 SUPERFAMILY SSF54001 277 606 2.38E-53 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily TVD_05560 d55c5a4a9e568642f307fd6ac216b24a 684 Gene3D G3DSA:3.10.620.30 337 488 2.6E-21 T 11-10-2018 TVD_10530 63fb07ca1bbfadd650e763cb818d82b9 400 Gene3D G3DSA:3.40.800.20 19 395 5.6E-107 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TVD_10530 63fb07ca1bbfadd650e763cb818d82b9 400 Pfam PF00850 Histone deacetylase domain 44 332 7.8E-64 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TVD_10530 63fb07ca1bbfadd650e763cb818d82b9 400 PRINTS PR01270 Histone deacetylase superfamily signature 261 271 1.3E-19 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TVD_10530 63fb07ca1bbfadd650e763cb818d82b9 400 PRINTS PR01270 Histone deacetylase superfamily signature 177 192 1.3E-19 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TVD_10530 63fb07ca1bbfadd650e763cb818d82b9 400 PRINTS PR01270 Histone deacetylase superfamily signature 145 168 1.3E-19 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 TVD_10530 63fb07ca1bbfadd650e763cb818d82b9 400 SUPERFAMILY SSF52768 22 345 1.01E-87 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily TVD_10395 cc6f5a231b76cc011b0113bc30f79b01 337 Gene3D G3DSA:3.30.1150.10 224 337 2.3E-18 T 11-10-2018 TVD_10395 cc6f5a231b76cc011b0113bc30f79b01 337 TIGRFAM TIGR02794 tolA_full: protein TolA 12 325 7.4E-38 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 TVD_10395 cc6f5a231b76cc011b0113bc30f79b01 337 Pfam PF13103 TonB C terminal 251 324 9.1E-11 T 11-10-2018 TVD_10395 cc6f5a231b76cc011b0113bc30f79b01 337 SUPERFAMILY SSF74653 231 337 8.37E-16 T 11-10-2018 TVD_11550 ec5150aa33487394f797b3528ccb175a 801 Pfam PF03176 MMPL family 178 400 1.8E-9 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 TVD_11550 ec5150aa33487394f797b3528ccb175a 801 SUPERFAMILY SSF82866 182 400 3.79E-16 T 11-10-2018 TVD_11550 ec5150aa33487394f797b3528ccb175a 801 SUPERFAMILY SSF82866 635 793 2.62E-19 T 11-10-2018 TVD_10400 c1c40ebf4843b5831c3b295a9d60a990 150 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 4 143 27.995 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 TVD_10400 c1c40ebf4843b5831c3b295a9d60a990 150 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 144 7.8E-26 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 TVD_10400 c1c40ebf4843b5831c3b295a9d60a990 150 TIGRFAM TIGR02801 tolR: protein TolR 15 143 5.6E-41 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 TVD_10400 c1c40ebf4843b5831c3b295a9d60a990 150 Gene3D G3DSA:3.30.420.270 63 135 1.9E-16 T 11-10-2018 TVD_02840 49cd5671a97eaa8f93f37e7080e09b26 455 Pfam PF10011 Predicted membrane protein (DUF2254) 13 390 6.4E-129 T 11-10-2018 IPR018723 Protein of unknown function DUF2254, membrane TVD_13160 5eb613a543ded8850252bd85e7ac94a8 89 Gene3D G3DSA:1.20.58.110 1 87 5.8E-28 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_13160 5eb613a543ded8850252bd85e7ac94a8 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 7.8E-27 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_13160 5eb613a543ded8850252bd85e7ac94a8 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.532 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_13160 5eb613a543ded8850252bd85e7ac94a8 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 87 1.0E-16 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_13160 5eb613a543ded8850252bd85e7ac94a8 89 SUPERFAMILY SSF46992 3 86 1.83E-29 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_13160 5eb613a543ded8850252bd85e7ac94a8 89 Pfam PF01649 Ribosomal protein S20 2 83 9.5E-27 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_04140 71fbc94d3df8cc46033bce99d0eeda62 361 Gene3D G3DSA:3.40.50.1980 33 245 2.2E-43 T 11-10-2018 TVD_04140 71fbc94d3df8cc46033bce99d0eeda62 361 SUPERFAMILY SSF53807 31 356 1.02E-71 T 11-10-2018 TVD_04140 71fbc94d3df8cc46033bce99d0eeda62 361 Gene3D G3DSA:3.40.50.1980 246 359 3.9E-41 T 11-10-2018 TVD_04140 71fbc94d3df8cc46033bce99d0eeda62 361 Pfam PF01297 Zinc-uptake complex component A periplasmic 34 354 1.0E-61 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 TVD_08300 05e61b530d89e7c431c8686769756191 214 SUPERFAMILY SSF51306 90 210 1.2E-29 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily TVD_08300 05e61b530d89e7c431c8686769756191 214 Gene3D G3DSA:2.10.109.10 95 213 8.8E-35 T 11-10-2018 TVD_08300 05e61b530d89e7c431c8686769756191 214 TIGRFAM TIGR00498 lexA: repressor LexA 1 211 1.6E-49 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 TVD_08300 05e61b530d89e7c431c8686769756191 214 Pfam PF01726 LexA DNA binding domain 1 64 1.1E-12 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 TVD_08300 05e61b530d89e7c431c8686769756191 214 SUPERFAMILY SSF46785 3 68 2.58E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_08300 05e61b530d89e7c431c8686769756191 214 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 165 177 9.7E-9 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 TVD_08300 05e61b530d89e7c431c8686769756191 214 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 135 9.7E-9 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 TVD_08300 05e61b530d89e7c431c8686769756191 214 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 136 147 9.7E-9 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 TVD_08300 05e61b530d89e7c431c8686769756191 214 Gene3D G3DSA:1.10.10.10 1 68 4.2E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_08300 05e61b530d89e7c431c8686769756191 214 Hamap MF_00015 LexA repressor [lexA]. 3 212 30.381 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 TVD_08300 05e61b530d89e7c431c8686769756191 214 Pfam PF00717 Peptidase S24-like 128 194 5.9E-16 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C TVD_05660 cb388833cb0cfe9a876caa95674fad11 520 SUPERFAMILY SSF52540 347 516 2.86E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_05660 cb388833cb0cfe9a876caa95674fad11 520 Gene3D G3DSA:3.40.50.300 348 518 1.2E-29 T 11-10-2018 TVD_05660 cb388833cb0cfe9a876caa95674fad11 520 SUPERFAMILY SSF56112 33 310 6.29E-18 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily TVD_05660 cb388833cb0cfe9a876caa95674fad11 520 Pfam PF13671 AAA domain 352 489 9.7E-31 T 11-10-2018 TVD_01060 fee3cbdc547e5467ee194c00f5896f15 362 Gene3D G3DSA:1.10.10.10 19 96 2.8E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_01060 fee3cbdc547e5467ee194c00f5896f15 362 Gene3D G3DSA:3.40.50.150 138 356 6.9E-31 T 11-10-2018 TVD_01060 fee3cbdc547e5467ee194c00f5896f15 362 Pfam PF13847 Methyltransferase domain 176 291 8.5E-30 T 11-10-2018 IPR025714 Methyltransferase domain TVD_01060 fee3cbdc547e5467ee194c00f5896f15 362 SUPERFAMILY SSF46785 24 91 5.63E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_01060 fee3cbdc547e5467ee194c00f5896f15 362 SUPERFAMILY SSF53335 138 357 1.49E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_04735 5d266ed312066b940af9ff8e3ccc68e4 251 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 16 227 6.5E-46 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 TVD_04735 5d266ed312066b940af9ff8e3ccc68e4 251 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 15 245 5.5E-65 T 11-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 TVD_04735 5d266ed312066b940af9ff8e3ccc68e4 251 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 19 33 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 TVD_04735 5d266ed312066b940af9ff8e3ccc68e4 251 SUPERFAMILY SSF53790 12 246 1.28E-50 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 TVD_04735 5d266ed312066b940af9ff8e3ccc68e4 251 Gene3D G3DSA:3.30.950.10 146 249 8.2E-17 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 TVD_04735 5d266ed312066b940af9ff8e3ccc68e4 251 Gene3D G3DSA:3.40.1010.10 15 145 3.7E-30 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 TVD_04735 5d266ed312066b940af9ff8e3ccc68e4 251 PIRSF PIRSF036427 12 251 7.7E-68 T 11-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 TVD_13625 69aa0e0d6bdc0efe0575774e4e90987f 270 Gene3D G3DSA:3.40.50.620 5 242 1.9E-50 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_13625 69aa0e0d6bdc0efe0575774e4e90987f 270 PIRSF PIRSF004976 3 246 2.0E-60 T 11-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 TVD_13625 69aa0e0d6bdc0efe0575774e4e90987f 270 SUPERFAMILY SSF52402 9 223 1.37E-50 T 11-10-2018 TVD_13625 69aa0e0d6bdc0efe0575774e4e90987f 270 Pfam PF01171 PP-loop family 30 198 7.7E-17 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 TVD_01860 28183b9417dc2e0486c2ea6b641d5110 290 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 289 39.366 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 TVD_01860 28183b9417dc2e0486c2ea6b641d5110 290 PIRSF PIRSF005052 1 290 1.4E-107 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 TVD_01860 28183b9417dc2e0486c2ea6b641d5110 290 Pfam PF03668 P-loop ATPase protein family 1 290 3.4E-93 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 TVD_01860 28183b9417dc2e0486c2ea6b641d5110 290 SUPERFAMILY SSF52540 1 158 5.83E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06605 3de4f4c27b3eef7406f6f02e46ce2714 357 SUPERFAMILY SSF52540 35 238 2.39E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06605 3de4f4c27b3eef7406f6f02e46ce2714 357 Pfam PF13481 AAA domain 28 197 3.0E-41 T 11-10-2018 TVD_06605 3de4f4c27b3eef7406f6f02e46ce2714 357 Gene3D G3DSA:3.40.50.300 17 253 4.2E-37 T 11-10-2018 TVD_02335 c58ae15f6f7cd7f674a8a02cf700ac57 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 4.7E-41 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02335 c58ae15f6f7cd7f674a8a02cf700ac57 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.797 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02335 c58ae15f6f7cd7f674a8a02cf700ac57 124 Gene3D G3DSA:2.40.50.140 1 124 4.2E-62 T 11-10-2018 TVD_02335 c58ae15f6f7cd7f674a8a02cf700ac57 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 1.5E-67 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_02335 c58ae15f6f7cd7f674a8a02cf700ac57 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.3E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02335 c58ae15f6f7cd7f674a8a02cf700ac57 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.3E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02335 c58ae15f6f7cd7f674a8a02cf700ac57 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.3E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02335 c58ae15f6f7cd7f674a8a02cf700ac57 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.3E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02335 c58ae15f6f7cd7f674a8a02cf700ac57 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.3E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02335 c58ae15f6f7cd7f674a8a02cf700ac57 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.3E-58 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02335 c58ae15f6f7cd7f674a8a02cf700ac57 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_02335 c58ae15f6f7cd7f674a8a02cf700ac57 124 SUPERFAMILY SSF50249 3 123 1.29E-50 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_02335 c58ae15f6f7cd7f674a8a02cf700ac57 124 PIRSF PIRSF002133 1 124 1.5E-53 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_05205 78ca93819c79780a2232f16b704a2d20 132 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 129 12.588 T 11-10-2018 IPR022907 VapC family GO:0004540 TVD_05205 78ca93819c79780a2232f16b704a2d20 132 Pfam PF01850 PIN domain 4 122 7.5E-20 T 11-10-2018 IPR002716 PIN domain TVD_05205 78ca93819c79780a2232f16b704a2d20 132 SUPERFAMILY SSF88723 2 131 4.77E-37 T 11-10-2018 IPR029060 PIN-like domain superfamily TVD_05205 78ca93819c79780a2232f16b704a2d20 132 Gene3D G3DSA:3.40.50.1010 1 130 1.4E-40 T 11-10-2018 TVD_05340 1398a85492bde97d8839cc3615c04ba7 156 Pfam PF13670 Peptidase propeptide and YPEB domain 106 150 3.5E-7 T 11-10-2018 IPR025711 PepSY domain TVD_10945 1304301e966a0b3df8ce3cbe58e05ee2 79 Gene3D G3DSA:3.40.30.10 1 77 1.7E-19 T 11-10-2018 TVD_10945 1304301e966a0b3df8ce3cbe58e05ee2 79 SUPERFAMILY SSF52833 2 77 1.66E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_10945 1304301e966a0b3df8ce3cbe58e05ee2 79 Pfam PF05768 Glutaredoxin-like domain (DUF836) 4 75 5.9E-15 T 11-10-2018 IPR008554 Glutaredoxin-like TVD_03410 ceaa8f227c0f25c85ff30977b35f9d94 312 SUPERFAMILY SSF161098 115 297 3.14E-25 T 11-10-2018 IPR035906 MetI-like superfamily TVD_03410 ceaa8f227c0f25c85ff30977b35f9d94 312 Gene3D G3DSA:1.10.3720.10 114 307 8.3E-23 T 11-10-2018 IPR035906 MetI-like superfamily TVD_03410 ceaa8f227c0f25c85ff30977b35f9d94 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 136 303 3.3E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TVD_03410 ceaa8f227c0f25c85ff30977b35f9d94 312 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 100 301 3.4E-94 T 11-10-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 TVD_09645 4c85ab0f99751f701962963ccc4be7b9 289 Pfam PF02616 Segregation and condensation protein ScpA 65 272 1.2E-26 T 11-10-2018 IPR003768 Segregation and condensation protein A TVD_09645 4c85ab0f99751f701962963ccc4be7b9 289 Hamap MF_01805 Segregation and condensation protein A [scpA]. 48 278 21.284 T 11-10-2018 IPR003768 Segregation and condensation protein A TVD_09495 b40fb556302c1bd44d4c8aee8445393f 369 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 267 2.3E-24 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TVD_09495 b40fb556302c1bd44d4c8aee8445393f 369 Gene3D G3DSA:2.40.420.20 278 350 1.4E-71 T 11-10-2018 TVD_09495 b40fb556302c1bd44d4c8aee8445393f 369 SUPERFAMILY SSF111369 56 274 3.14E-39 T 11-10-2018 TVD_09495 b40fb556302c1bd44d4c8aee8445393f 369 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 352 1.7E-69 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 TVD_09495 b40fb556302c1bd44d4c8aee8445393f 369 Gene3D G3DSA:2.40.30.170 55 277 1.4E-71 T 11-10-2018 TVD_09495 b40fb556302c1bd44d4c8aee8445393f 369 Gene3D G3DSA:2.40.50.100 67 195 1.4E-71 T 11-10-2018 TVD_09495 b40fb556302c1bd44d4c8aee8445393f 369 Gene3D G3DSA:1.10.287.470 102 161 1.4E-71 T 11-10-2018 TVD_12980 22e7de6772657999446cadd5ca796317 330 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 10 311 35.129 T 11-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 TVD_12980 22e7de6772657999446cadd5ca796317 330 Pfam PF01180 Dihydroorotate dehydrogenase 10 296 8.7E-64 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 TVD_12980 22e7de6772657999446cadd5ca796317 330 Gene3D G3DSA:3.20.20.70 5 314 1.0E-83 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_12980 22e7de6772657999446cadd5ca796317 330 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 249 269 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 TVD_12980 22e7de6772657999446cadd5ca796317 330 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 11 309 5.6E-93 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 TVD_12980 22e7de6772657999446cadd5ca796317 330 SUPERFAMILY SSF51395 6 310 1.65E-75 T 11-10-2018 TVD_12980 22e7de6772657999446cadd5ca796317 330 PIRSF PIRSF000164 1 312 1.2E-72 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 TVD_09315 3d1fdde6d7e06fa76975f454a4a15aaa 98 Pfam PF03334 Na+/H+ antiporter subunit 10 86 2.4E-25 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 TVD_07495 c1ab511def23fb4e4a954db1f77a343e 434 Gene3D G3DSA:1.10.580.10 58 417 2.5E-146 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 TVD_07495 c1ab511def23fb4e4a954db1f77a343e 434 Pfam PF00285 Citrate synthase, C-terminal domain 47 417 1.1E-133 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 TVD_07495 c1ab511def23fb4e4a954db1f77a343e 434 Gene3D G3DSA:1.10.230.10 269 382 2.5E-146 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain TVD_07495 c1ab511def23fb4e4a954db1f77a343e 434 SUPERFAMILY SSF48256 7 434 4.19E-164 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 TVD_07495 c1ab511def23fb4e4a954db1f77a343e 434 PIRSF PIRSF001369 39 434 1.3E-164 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type TVD_07495 c1ab511def23fb4e4a954db1f77a343e 434 PRINTS PR00143 Citrate synthase signature 242 270 4.5E-56 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 TVD_07495 c1ab511def23fb4e4a954db1f77a343e 434 PRINTS PR00143 Citrate synthase signature 166 179 4.5E-56 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 TVD_07495 c1ab511def23fb4e4a954db1f77a343e 434 PRINTS PR00143 Citrate synthase signature 298 318 4.5E-56 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 TVD_07495 c1ab511def23fb4e4a954db1f77a343e 434 PRINTS PR00143 Citrate synthase signature 365 381 4.5E-56 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 TVD_07495 c1ab511def23fb4e4a954db1f77a343e 434 PRINTS PR00143 Citrate synthase signature 385 399 4.5E-56 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 TVD_07495 c1ab511def23fb4e4a954db1f77a343e 434 PRINTS PR00143 Citrate synthase signature 220 235 4.5E-56 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 TVD_07495 c1ab511def23fb4e4a954db1f77a343e 434 Gene3D G3DSA:2.20.28.60 2 51 1.2E-19 T 11-10-2018 TVD_07495 c1ab511def23fb4e4a954db1f77a343e 434 ProSitePatterns PS00480 Citrate synthase signature. 305 317 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 TVD_07495 c1ab511def23fb4e4a954db1f77a343e 434 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 428 1.4E-219 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 TVD_13285 d594a110c2e45cdb4b81703f84ec00ee 724 Pfam PF02384 N-6 DNA Methylase 161 465 4.1E-55 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TVD_13285 d594a110c2e45cdb4b81703f84ec00ee 724 Gene3D G3DSA:3.40.50.150 164 483 2.5E-89 T 11-10-2018 TVD_13285 d594a110c2e45cdb4b81703f84ec00ee 724 Pfam PF12161 HsdM N-terminal domain 11 148 3.7E-22 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain TVD_13285 d594a110c2e45cdb4b81703f84ec00ee 724 SUPERFAMILY SSF53335 8 535 1.47E-114 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_13285 d594a110c2e45cdb4b81703f84ec00ee 724 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 217 231 4.0E-9 T 11-10-2018 TVD_13285 d594a110c2e45cdb4b81703f84ec00ee 724 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 293 305 4.0E-9 T 11-10-2018 TVD_13285 d594a110c2e45cdb4b81703f84ec00ee 724 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 185 201 4.0E-9 T 11-10-2018 TVD_11535 6104aff311c3b6f330bab6002af2f247 110 Gene3D G3DSA:3.10.129.10 5 110 2.7E-14 T 11-10-2018 TVD_11535 6104aff311c3b6f330bab6002af2f247 110 SUPERFAMILY SSF54637 8 74 1.31E-9 T 11-10-2018 IPR029069 HotDog domain superfamily TVD_11535 6104aff311c3b6f330bab6002af2f247 110 Pfam PF07977 FabA-like domain 9 43 2.6E-5 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TVD_02535 a7714fc5a2c5ca17c1f0ef2928fd22bf 284 Pfam PF09955 Predicted integral membrane protein (DUF2189) 87 210 1.9E-20 T 11-10-2018 IPR018692 Predicted integral membrane protein DUF2189 TVD_06425 eb33f735052f9bd82bfc282063ffa601 321 Gene3D G3DSA:3.90.226.10 75 272 4.3E-58 T 11-10-2018 TVD_06425 eb33f735052f9bd82bfc282063ffa601 321 SUPERFAMILY SSF52096 68 272 1.24E-35 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily TVD_06425 eb33f735052f9bd82bfc282063ffa601 321 Gene3D G3DSA:3.40.1750.20 176 242 4.3E-58 T 11-10-2018 TVD_06425 eb33f735052f9bd82bfc282063ffa601 321 Pfam PF01343 Peptidase family S49 135 277 1.3E-29 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 TVD_07535 6287ac0b61c8e64af62fe79408f83cd4 210 Pfam PF01914 MarC family integral membrane protein 7 203 3.0E-43 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 TVD_07535 6287ac0b61c8e64af62fe79408f83cd4 210 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 202 3.0E-40 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 TVD_01120 45bd252c4d3e7afabd2d2a8532674e08 253 Pfam PF01925 Sulfite exporter TauE/SafE 10 247 1.9E-34 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 TVD_06575 76d6ea9ca42dc3d119f7ff3c1a132ccd 223 SUPERFAMILY SSF53639 10 217 3.14E-69 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TVD_06575 76d6ea9ca42dc3d119f7ff3c1a132ccd 223 Gene3D G3DSA:3.40.225.10 9 222 8.5E-77 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily TVD_06575 76d6ea9ca42dc3d119f7ff3c1a132ccd 223 SMART SM01007 16 190 7.0E-70 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal TVD_06575 76d6ea9ca42dc3d119f7ff3c1a132ccd 223 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 17 189 3.6E-48 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal TVD_12650 12e764fc90a765ecb384df6f0c452719 124 Gene3D G3DSA:2.60.320.10 30 120 6.7E-14 T 11-10-2018 IPR038690 NusG, domain 2 superfamily TVD_12650 12e764fc90a765ecb384df6f0c452719 124 Pfam PF07009 NusG domain II 20 115 2.1E-15 T 11-10-2018 IPR024045 NusG, domain 2 TVD_07805 df1f884e7a6977361e59c4e7c7b4396c 98 Pfam PF09413 Putative prokaryotic signal transducing protein 1 56 3.8E-13 T 11-10-2018 IPR018551 Domain of unknown function DUF2007 TVD_03345 d854728149d83880dc7442a65fac9437 116 SUPERFAMILY SSF54913 2 100 4.13E-8 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TVD_03345 d854728149d83880dc7442a65fac9437 116 Gene3D G3DSA:3.30.70.120 2 103 3.7E-8 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TVD_10845 36995cef3155d20f0d6f2656b1e40384 452 Gene3D G3DSA:1.10.860.10 2 167 7.9E-56 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal TVD_10845 36995cef3155d20f0d6f2656b1e40384 452 Gene3D G3DSA:3.40.50.300 169 447 1.7E-108 T 11-10-2018 TVD_10845 36995cef3155d20f0d6f2656b1e40384 452 SMART SM00382 203 401 8.6E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_10845 36995cef3155d20f0d6f2656b1e40384 452 Pfam PF00772 DnaB-like helicase N terminal domain 8 109 1.5E-35 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 TVD_10845 36995cef3155d20f0d6f2656b1e40384 452 Pfam PF03796 DnaB-like helicase C terminal domain 186 441 1.4E-117 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 TVD_10845 36995cef3155d20f0d6f2656b1e40384 452 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 8 443 1.6E-180 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 TVD_10845 36995cef3155d20f0d6f2656b1e40384 452 SUPERFAMILY SSF48024 6 117 1.05E-38 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 TVD_10845 36995cef3155d20f0d6f2656b1e40384 452 SUPERFAMILY SSF52540 184 435 4.64E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04700 255b2ee156f1bd3dcc07c396dcaa95c6 430 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 10 427 3.0E-78 T 11-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 TVD_04700 255b2ee156f1bd3dcc07c396dcaa95c6 430 Gene3D G3DSA:3.40.50.300 7 181 1.6E-17 T 11-10-2018 TVD_04700 255b2ee156f1bd3dcc07c396dcaa95c6 430 Gene3D G3DSA:3.40.50.880 239 414 8.5E-9 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_04700 255b2ee156f1bd3dcc07c396dcaa95c6 430 SUPERFAMILY SSF52317 235 428 1.64E-30 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_04700 255b2ee156f1bd3dcc07c396dcaa95c6 430 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 10 179 4.6E-14 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TVD_04700 255b2ee156f1bd3dcc07c396dcaa95c6 430 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 238 419 4.5E-29 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 TVD_04700 255b2ee156f1bd3dcc07c396dcaa95c6 430 SUPERFAMILY SSF52540 7 193 5.48E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06230 13f2f4c04a12f30fd1d88364d9c1c2ee 178 Pfam PF16823 Atypical PilZ domain, cyclic di-GMP receptor 57 171 2.9E-16 T 11-10-2018 IPR031800 Cyclic di-GMP receptor, atypical PilZ domain TVD_04400 a1bf5730e9e7740646272f2c987062c4 426 Gene3D G3DSA:3.60.21.10 1 247 1.2E-26 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TVD_04400 a1bf5730e9e7740646272f2c987062c4 426 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 199 4.3E-8 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 TVD_04400 a1bf5730e9e7740646272f2c987062c4 426 SUPERFAMILY SSF56300 1 278 9.95E-32 T 11-10-2018 TVD_01075 56d4c55023630917520816ebf7558e38 338 SUPERFAMILY SSF47616 171 329 5.29E-38 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TVD_01075 56d4c55023630917520816ebf7558e38 338 Gene3D G3DSA:3.40.30.130 1 182 3.5E-67 T 11-10-2018 TVD_01075 56d4c55023630917520816ebf7558e38 338 PIRSF PIRSF015753 7 324 1.8E-128 T 11-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 TVD_01075 56d4c55023630917520816ebf7558e38 338 Gene3D G3DSA:1.20.1050.10 183 333 2.1E-67 T 11-10-2018 TVD_01075 56d4c55023630917520816ebf7558e38 338 SUPERFAMILY SSF52833 46 162 2.88E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_01075 56d4c55023630917520816ebf7558e38 338 Pfam PF13409 Glutathione S-transferase, N-terminal domain 63 158 1.6E-17 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TVD_01075 56d4c55023630917520816ebf7558e38 338 Pfam PF13410 Glutathione S-transferase, C-terminal domain 204 275 3.8E-12 T 11-10-2018 TVD_08965 43edee60f17e89b7d3f474355b1cc719 206 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 27 178 1.3E-50 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TVD_08965 43edee60f17e89b7d3f474355b1cc719 206 Gene3D G3DSA:3.30.1060.10 17 186 1.4E-59 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TVD_08965 43edee60f17e89b7d3f474355b1cc719 206 Pfam PF01625 Peptide methionine sulfoxide reductase 28 179 1.2E-54 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TVD_08965 43edee60f17e89b7d3f474355b1cc719 206 SUPERFAMILY SSF55068 12 190 6.41E-67 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TVD_08965 43edee60f17e89b7d3f474355b1cc719 206 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 26 185 33.349 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 TVD_00035 e56d4fe17155b3ce1e40c09581a5ae6a 376 Pfam PF10442 FIST C domain 247 361 2.8E-26 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 TVD_00035 e56d4fe17155b3ce1e40c09581a5ae6a 376 Pfam PF08495 FIST N domain 40 221 4.3E-13 T 11-10-2018 IPR013702 FIST domain, N-terminal TVD_00035 e56d4fe17155b3ce1e40c09581a5ae6a 376 SMART SM00897 38 222 0.003 T 11-10-2018 IPR013702 FIST domain, N-terminal TVD_00035 e56d4fe17155b3ce1e40c09581a5ae6a 376 SMART SM01204 223 363 2.0E-31 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 TVD_00035 e56d4fe17155b3ce1e40c09581a5ae6a 376 PIRSF PIRSF018953 16 376 6.1E-49 T 11-10-2018 IPR016741 Uncharacterised conserved protein UCP018953 TVD_12455 27ff00d3925ae42257a98987de702d6f 245 Pfam PF04338 Protein of unknown function, DUF481 38 244 5.9E-59 T 11-10-2018 IPR007433 Protein of unknown function DUF481 TVD_01450 3f329bf3ba2743d60c945e58b071890b 288 Pfam PF03781 Sulfatase-modifying factor enzyme 1 41 284 4.8E-46 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 TVD_01450 3f329bf3ba2743d60c945e58b071890b 288 Gene3D G3DSA:3.90.1580.10 29 287 6.0E-51 T 11-10-2018 TVD_01450 3f329bf3ba2743d60c945e58b071890b 288 SUPERFAMILY SSF56436 39 286 6.59E-55 T 11-10-2018 IPR016187 C-type lectin fold TVD_09670 420b69ff39a42f7e73c598ba984348ba 285 Pfam PF00639 PPIC-type PPIASE domain 160 237 2.7E-22 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 TVD_09670 420b69ff39a42f7e73c598ba984348ba 285 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 176 197 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 TVD_09670 420b69ff39a42f7e73c598ba984348ba 285 Gene3D G3DSA:3.10.50.40 141 272 2.9E-33 T 11-10-2018 TVD_09670 420b69ff39a42f7e73c598ba984348ba 285 SUPERFAMILY SSF54534 147 241 9.16E-30 T 11-10-2018 TVD_09670 420b69ff39a42f7e73c598ba984348ba 285 SUPERFAMILY SSF109998 45 176 6.67E-13 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily TVD_00780 697c131e881385289edfcfc07b774e20 160 Pfam PF01475 Ferric uptake regulator family 26 144 3.6E-15 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 TVD_00780 697c131e881385289edfcfc07b774e20 160 SUPERFAMILY SSF46785 18 151 5.46E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_00780 697c131e881385289edfcfc07b774e20 160 Gene3D G3DSA:1.10.10.10 7 95 9.6E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_00780 697c131e881385289edfcfc07b774e20 160 Gene3D G3DSA:3.30.1490.190 96 155 4.7E-14 T 11-10-2018 TVD_02590 d2c3a190cd04768cac56e3750a480ec2 375 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 7 351 9.4E-95 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 TVD_02590 d2c3a190cd04768cac56e3750a480ec2 375 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 351 3.7E-65 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 TVD_11380 4beb9c1d66a5c5b0a32da533cbd0b55f 229 SUPERFAMILY SSF52833 6 104 2.47E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_11380 4beb9c1d66a5c5b0a32da533cbd0b55f 229 Gene3D G3DSA:1.20.1050.10 85 211 6.3E-15 T 11-10-2018 TVD_11380 4beb9c1d66a5c5b0a32da533cbd0b55f 229 SUPERFAMILY SSF47616 78 200 3.06E-19 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily TVD_11380 4beb9c1d66a5c5b0a32da533cbd0b55f 229 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 78 2.5E-16 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TVD_11380 4beb9c1d66a5c5b0a32da533cbd0b55f 229 Gene3D G3DSA:3.40.30.10 2 84 7.7E-23 T 11-10-2018 TVD_03355 3f8b6cb4836773e1f64472192b26710f 372 SUPERFAMILY SSF81324 149 246 2.62E-23 T 11-10-2018 TVD_03355 3f8b6cb4836773e1f64472192b26710f 372 Gene3D G3DSA:3.40.190.10 41 151 2.8E-24 T 11-10-2018 TVD_03355 3f8b6cb4836773e1f64472192b26710f 372 SUPERFAMILY SSF53850 16 371 6.46E-48 T 11-10-2018 TVD_03355 3f8b6cb4836773e1f64472192b26710f 372 Gene3D G3DSA:1.10.287.70 152 245 1.0E-20 T 11-10-2018 TVD_03355 3f8b6cb4836773e1f64472192b26710f 372 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 371 1.9E-45 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TVD_03355 3f8b6cb4836773e1f64472192b26710f 372 Gene3D G3DSA:3.40.190.10 246 330 2.8E-15 T 11-10-2018 TVD_03355 3f8b6cb4836773e1f64472192b26710f 372 Pfam PF00060 Ligand-gated ion channel 161 263 2.1E-18 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 TVD_03355 3f8b6cb4836773e1f64472192b26710f 372 Pfam PF07885 Ion channel 175 245 5.5E-11 T 11-10-2018 IPR013099 Potassium channel domain TVD_03355 3f8b6cb4836773e1f64472192b26710f 372 SMART SM00079 43 372 8.4E-6 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 TVD_03355 3f8b6cb4836773e1f64472192b26710f 372 SMART SM00062 43 372 4.5E-15 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TVD_05685 6c3862313f283696c6458b857a999d6c 351 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 10 177 2.9E-39 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_05685 6c3862313f283696c6458b857a999d6c 351 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 195 339 9.5E-15 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_05685 6c3862313f283696c6458b857a999d6c 351 Gene3D G3DSA:3.30.2340.10 176 307 3.4E-105 T 11-10-2018 TVD_05685 6c3862313f283696c6458b857a999d6c 351 SUPERFAMILY SSF55120 9 342 1.11E-79 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_05685 6c3862313f283696c6458b857a999d6c 351 Gene3D G3DSA:3.30.2350.20 13 341 3.4E-105 T 11-10-2018 TVD_05685 6c3862313f283696c6458b857a999d6c 351 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 73 86 - T 11-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 TVD_05685 6c3862313f283696c6458b857a999d6c 351 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 1 347 24.307 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_03840 dbe5b33744e24e3040538450e72050e6 255 Pfam PF01061 ABC-2 type transporter 6 216 2.3E-33 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 TVD_03840 dbe5b33744e24e3040538450e72050e6 255 PIRSF PIRSF006648 1 253 5.5E-77 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 TVD_08485 0ec96a15af9c39256917045c3a51b1db 364 SMART SM00267 197 364 2.3E-56 T 11-10-2018 IPR000160 GGDEF domain TVD_08485 0ec96a15af9c39256917045c3a51b1db 364 Gene3D G3DSA:3.30.70.270 197 363 3.3E-57 T 11-10-2018 TVD_08485 0ec96a15af9c39256917045c3a51b1db 364 Pfam PF00990 Diguanylate cyclase, GGDEF domain 208 360 5.9E-43 T 11-10-2018 IPR000160 GGDEF domain TVD_08485 0ec96a15af9c39256917045c3a51b1db 364 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 204 362 2.8E-48 T 11-10-2018 IPR000160 GGDEF domain TVD_08485 0ec96a15af9c39256917045c3a51b1db 364 SUPERFAMILY SSF55073 213 362 1.41E-46 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_11710 793bad19a8285b652069d564e8cbb34f 138 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 134 2.1E-28 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 TVD_11710 793bad19a8285b652069d564e8cbb34f 138 Gene3D G3DSA:3.30.420.270 61 130 1.2E-13 T 11-10-2018 TVD_08060 7a6f70c2b7367104c0c7b1c00d2579fd 126 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 6 30 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08060 7a6f70c2b7367104c0c7b1c00d2579fd 126 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 120 1.1E-26 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08060 7a6f70c2b7367104c0c7b1c00d2579fd 126 Gene3D G3DSA:1.20.1300.10 1 125 1.5E-33 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08060 7a6f70c2b7367104c0c7b1c00d2579fd 126 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 122 2.9E-31 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08060 7a6f70c2b7367104c0c7b1c00d2579fd 126 PIRSF PIRSF000178 1 125 9.0E-23 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_08060 7a6f70c2b7367104c0c7b1c00d2579fd 126 SUPERFAMILY SSF81343 3 121 6.32E-26 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 TVD_00720 ff73ad47b053520bd929ee53e834a5c6 323 Gene3D G3DSA:3.40.50.720 9 277 2.2E-52 T 11-10-2018 TVD_00720 ff73ad47b053520bd929ee53e834a5c6 323 Pfam PF13460 NAD(P)H-binding 13 161 5.9E-25 T 11-10-2018 IPR016040 NAD(P)-binding domain TVD_00720 ff73ad47b053520bd929ee53e834a5c6 323 SUPERFAMILY SSF51735 7 264 9.43E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_04505 2afe57c9218406b2a0e8952789ceafde 232 SMART SM00450 124 219 4.1E-14 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_04505 2afe57c9218406b2a0e8952789ceafde 232 Pfam PF01022 Bacterial regulatory protein, arsR family 26 72 5.1E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_04505 2afe57c9218406b2a0e8952789ceafde 232 SUPERFAMILY SSF46785 11 115 8.06E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_04505 2afe57c9218406b2a0e8952789ceafde 232 Pfam PF00581 Rhodanese-like domain 128 214 2.1E-7 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_04505 2afe57c9218406b2a0e8952789ceafde 232 SMART SM00418 19 97 3.7E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_04505 2afe57c9218406b2a0e8952789ceafde 232 SUPERFAMILY SSF52821 109 222 7.86E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_04505 2afe57c9218406b2a0e8952789ceafde 232 Gene3D G3DSA:3.40.250.10 127 225 1.8E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_04505 2afe57c9218406b2a0e8952789ceafde 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 2.0E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_04505 2afe57c9218406b2a0e8952789ceafde 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 2.0E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_04505 2afe57c9218406b2a0e8952789ceafde 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 2.0E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TVD_04505 2afe57c9218406b2a0e8952789ceafde 232 Gene3D G3DSA:1.10.10.10 5 109 2.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_03455 f668f49b4f440b0b2c6d91eb2097f07c 491 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 293 299 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TVD_03455 f668f49b4f440b0b2c6d91eb2097f07c 491 SUPERFAMILY SSF53335 3 491 2.86E-109 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_03455 f668f49b4f440b0b2c6d91eb2097f07c 491 Pfam PF12161 HsdM N-terminal domain 7 142 4.6E-11 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain TVD_03455 f668f49b4f440b0b2c6d91eb2097f07c 491 Pfam PF02384 N-6 DNA Methylase 153 459 3.7E-58 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TVD_03455 f668f49b4f440b0b2c6d91eb2097f07c 491 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 176 192 4.3E-19 T 11-10-2018 TVD_03455 f668f49b4f440b0b2c6d91eb2097f07c 491 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 290 302 4.3E-19 T 11-10-2018 TVD_03455 f668f49b4f440b0b2c6d91eb2097f07c 491 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 200 214 4.3E-19 T 11-10-2018 TVD_03455 f668f49b4f440b0b2c6d91eb2097f07c 491 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 317 341 4.3E-19 T 11-10-2018 TVD_03455 f668f49b4f440b0b2c6d91eb2097f07c 491 Gene3D G3DSA:1.20.1260.30 1 149 1.1E-46 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily TVD_03455 f668f49b4f440b0b2c6d91eb2097f07c 491 Gene3D G3DSA:3.40.50.150 151 463 2.0E-74 T 11-10-2018 TVD_12270 722ebe79550c3178830cd683645e2ab5 1379 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1046 1378 5.8E-60 T 11-10-2018 IPR007452 Translocation and assembly module TamB TVD_12375 6ed9fb75a0d7917573a365a1952d60ff 157 Gene3D G3DSA:2.60.120.1140 27 152 1.4E-40 T 11-10-2018 IPR038695 Saro_0823-like superfamily TVD_12375 6ed9fb75a0d7917573a365a1952d60ff 157 Pfam PF02643 Uncharacterized ACR, COG1430 46 146 1.9E-34 T 11-10-2018 IPR003795 Protein of unknown function DUF192 TVD_12690 58c352c3eb3ff6b0632eecad51855186 302 PIRSF PIRSF006816 15 300 1.7E-48 T 11-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 TVD_12690 58c352c3eb3ff6b0632eecad51855186 302 Gene3D G3DSA:3.40.50.80 116 248 1.2E-11 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_12690 58c352c3eb3ff6b0632eecad51855186 302 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 255 295 5.3E-15 T 11-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain TVD_12690 58c352c3eb3ff6b0632eecad51855186 302 SUPERFAMILY SSF63380 18 111 6.45E-18 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TVD_12690 58c352c3eb3ff6b0632eecad51855186 302 Gene3D G3DSA:2.40.30.10 14 109 1.3E-23 T 11-10-2018 TVD_12690 58c352c3eb3ff6b0632eecad51855186 302 SUPERFAMILY SSF52343 106 295 3.4E-23 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_12690 58c352c3eb3ff6b0632eecad51855186 302 Gene3D G3DSA:2.10.240.10 255 296 2.7E-10 T 11-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily TVD_07580 b7a3185b8c33a200e4deb9295d23d7f2 206 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 17 177 1.2E-26 T 11-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 TVD_07580 b7a3185b8c33a200e4deb9295d23d7f2 206 Gene3D G3DSA:3.40.50.150 5 205 2.2E-46 T 11-10-2018 TVD_07580 b7a3185b8c33a200e4deb9295d23d7f2 206 SUPERFAMILY SSF53335 18 188 1.99E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_01895 ce2145d0916f09a7a8546bce58cca7c1 179 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 10 163 5.9E-19 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 TVD_01895 ce2145d0916f09a7a8546bce58cca7c1 179 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 10 164 6.4E-17 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related TVD_03745 ff8840967171aac4b344b51c0ed6f900 193 SUPERFAMILY SSF55729 15 176 1.6E-14 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_03745 ff8840967171aac4b344b51c0ed6f900 193 Pfam PF00583 Acetyltransferase (GNAT) family 36 142 2.7E-6 T 11-10-2018 IPR000182 GNAT domain TVD_03745 ff8840967171aac4b344b51c0ed6f900 193 Gene3D G3DSA:3.40.630.30 14 180 1.2E-11 T 11-10-2018 TVD_04370 d93a9644278fe87830c658eec2e6a959 378 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 148 4.5E-6 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 TVD_08815 0773a712aa3030c8573550ed4fcdcebc 381 Pfam PF04055 Radical SAM superfamily 89 239 1.2E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TVD_08815 0773a712aa3030c8573550ed4fcdcebc 381 SUPERFAMILY SSF102114 55 324 2.75E-40 T 11-10-2018 TVD_08815 0773a712aa3030c8573550ed4fcdcebc 381 Gene3D G3DSA:3.20.20.70 76 295 1.4E-33 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_08815 0773a712aa3030c8573550ed4fcdcebc 381 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 14 362 4.8E-198 T 11-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme TVD_09085 aeef9efc53e1f61a6215327751d8be6d 372 SUPERFAMILY SSF53474 47 361 1.38E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_09755 6d9f6bb1c6433d79a480194309dc85f9 326 SUPERFAMILY SSF53187 15 319 2.08E-56 T 11-10-2018 TVD_09755 6d9f6bb1c6433d79a480194309dc85f9 326 Gene3D G3DSA:3.40.630.10 2 313 2.8E-52 T 11-10-2018 TVD_09755 6d9f6bb1c6433d79a480194309dc85f9 326 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 20 309 9.6E-22 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 TVD_07840 3f824d0be9a71b7bc299e39823300f7a 260 Pfam PF13230 Glutamine amidotransferases class-II 39 249 1.2E-13 T 11-10-2018 IPR026869 Putative glutamine amidotransferase type 2 TVD_07840 3f824d0be9a71b7bc299e39823300f7a 260 TIGRFAM TIGR03442 TIGR03442: ergothioneine biosynthesis protein EgtC 1 252 1.3E-69 T 11-10-2018 IPR017808 Ergothioneine biosynthesis protein EgtC GO:0052699 TVD_07840 3f824d0be9a71b7bc299e39823300f7a 260 SUPERFAMILY SSF56235 39 253 4.15E-28 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_07840 3f824d0be9a71b7bc299e39823300f7a 260 Gene3D G3DSA:3.60.20.10 1 257 1.0E-65 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal TVD_01820 0019286a825910723542f1ae18982726 180 Pfam PF04351 Pilus assembly protein, PilP 32 178 1.5E-44 T 11-10-2018 IPR007446 Pilus assembly protein PilP TVD_01820 0019286a825910723542f1ae18982726 180 PIRSF PIRSF016481 12 180 4.4E-34 T 11-10-2018 IPR007446 Pilus assembly protein PilP TVD_01820 0019286a825910723542f1ae18982726 180 Gene3D G3DSA:2.30.30.830 88 179 1.0E-29 T 11-10-2018 TVD_11770 bbe1b566349d6cec91d26e5b0b1232ab 255 SUPERFAMILY SSF75217 1 242 2.68E-92 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TVD_11770 bbe1b566349d6cec91d26e5b0b1232ab 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 227 7.9E-86 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TVD_11770 bbe1b566349d6cec91d26e5b0b1232ab 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 3.0E-59 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TVD_11770 bbe1b566349d6cec91d26e5b0b1232ab 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 104.331 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TVD_11770 bbe1b566349d6cec91d26e5b0b1232ab 255 Gene3D G3DSA:3.40.1280.10 1 165 5.0E-59 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TVD_11770 bbe1b566349d6cec91d26e5b0b1232ab 255 PIRSF PIRSF000386 1 250 1.9E-91 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TVD_11770 bbe1b566349d6cec91d26e5b0b1232ab 255 Gene3D G3DSA:1.10.1270.20 166 252 4.1E-31 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TVD_05490 dd16671ad9ed4a7c5427b8c4ed7b4bb9 341 SUPERFAMILY SSF55347 132 324 4.17E-78 T 11-10-2018 TVD_05490 dd16671ad9ed4a7c5427b8c4ed7b4bb9 341 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 8 338 5.2E-135 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TVD_05490 dd16671ad9ed4a7c5427b8c4ed7b4bb9 341 PIRSF PIRSF000148 5 341 7.3E-133 T 11-10-2018 TVD_05490 dd16671ad9ed4a7c5427b8c4ed7b4bb9 341 Gene3D G3DSA:3.40.50.720 8 334 3.2E-145 T 11-10-2018 TVD_05490 dd16671ad9ed4a7c5427b8c4ed7b4bb9 341 Gene3D G3DSA:3.30.360.10 131 320 3.2E-145 T 11-10-2018 TVD_05490 dd16671ad9ed4a7c5427b8c4ed7b4bb9 341 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 5 337 37.118 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 TVD_05490 dd16671ad9ed4a7c5427b8c4ed7b4bb9 341 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 142 323 6.4E-60 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 TVD_05490 dd16671ad9ed4a7c5427b8c4ed7b4bb9 341 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 119 4.1E-29 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TVD_05490 dd16671ad9ed4a7c5427b8c4ed7b4bb9 341 SMART SM00859 7 122 1.5E-40 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TVD_05490 dd16671ad9ed4a7c5427b8c4ed7b4bb9 341 SUPERFAMILY SSF51735 6 160 6.88E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_08295 6ad219a295a5b4b645f8ad5e7e9a24aa 811 SMART SM00490 324 412 4.9E-15 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_08295 6ad219a295a5b4b645f8ad5e7e9a24aa 811 Pfam PF00270 DEAD/DEAH box helicase 80 249 1.5E-26 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TVD_08295 6ad219a295a5b4b645f8ad5e7e9a24aa 811 Gene3D G3DSA:3.40.50.300 60 264 2.4E-46 T 11-10-2018 TVD_08295 6ad219a295a5b4b645f8ad5e7e9a24aa 811 Gene3D G3DSA:3.40.50.300 293 461 2.5E-23 T 11-10-2018 TVD_08295 6ad219a295a5b4b645f8ad5e7e9a24aa 811 Pfam PF09369 Domain of unknown function (DUF1998) 674 780 3.9E-15 T 11-10-2018 IPR018973 DEAD/DEAH-box helicase, putative TVD_08295 6ad219a295a5b4b645f8ad5e7e9a24aa 811 SMART SM00487 74 278 4.1E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_08295 6ad219a295a5b4b645f8ad5e7e9a24aa 811 Pfam PF00271 Helicase conserved C-terminal domain 312 411 8.6E-15 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_08295 6ad219a295a5b4b645f8ad5e7e9a24aa 811 SUPERFAMILY SSF52540 87 419 5.61E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_08160 708f611c3e5fc732f8656b4394244364 599 Gene3D G3DSA:3.30.870.10 217 343 4.1E-7 T 11-10-2018 TVD_13440 6554256b0ceb5353ebe4f4dbe63a80e1 276 SUPERFAMILY SSF69618 22 264 3.4E-56 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_13440 6554256b0ceb5353ebe4f4dbe63a80e1 276 Gene3D G3DSA:3.40.50.10090 52 184 4.4E-74 T 11-10-2018 TVD_13440 6554256b0ceb5353ebe4f4dbe63a80e1 276 Pfam PF02602 Uroporphyrinogen-III synthase HemD 35 261 1.9E-49 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_13440 6554256b0ceb5353ebe4f4dbe63a80e1 276 Gene3D G3DSA:3.40.50.10090 23 254 4.4E-74 T 11-10-2018 TVD_00685 fd84cdc564545104a61f4d7cb78f88db 356 PIRSF PIRSF000450 1 292 1.4E-56 T 11-10-2018 IPR033752 MetA family TVD_00685 fd84cdc564545104a61f4d7cb78f88db 356 PIRSF PIRSF000450 305 343 1.0 T 11-10-2018 IPR033752 MetA family TVD_00685 fd84cdc564545104a61f4d7cb78f88db 356 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 337 36.666 T 11-10-2018 IPR033752 MetA family TVD_00685 fd84cdc564545104a61f4d7cb78f88db 356 Gene3D G3DSA:3.40.50.880 1 338 5.8E-90 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_00685 fd84cdc564545104a61f4d7cb78f88db 356 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 255 1.0E-91 T 11-10-2018 TVD_00685 fd84cdc564545104a61f4d7cb78f88db 356 Pfam PF04204 Homoserine O-succinyltransferase 2 334 8.0E-89 T 11-10-2018 IPR033752 MetA family TVD_00685 fd84cdc564545104a61f4d7cb78f88db 356 SUPERFAMILY SSF52317 17 333 3.6E-70 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_04195 0e64a4032be8b9e1bb969c462d4efa29 170 Gene3D G3DSA:1.20.144.10 57 166 9.4E-16 T 11-10-2018 TVD_04195 0e64a4032be8b9e1bb969c462d4efa29 170 SUPERFAMILY SSF48317 5 166 1.57E-32 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily TVD_04195 0e64a4032be8b9e1bb969c462d4efa29 170 Pfam PF01569 PAP2 superfamily 59 163 6.8E-18 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TVD_04195 0e64a4032be8b9e1bb969c462d4efa29 170 SMART SM00014 57 164 1.6E-13 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase TVD_04175 97f7489fc1ebd5e5eb5ce707c53e01fc 137 Gene3D G3DSA:3.40.250.10 1 131 8.0E-33 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_04175 97f7489fc1ebd5e5eb5ce707c53e01fc 137 Pfam PF00581 Rhodanese-like domain 23 121 2.7E-15 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_04175 97f7489fc1ebd5e5eb5ce707c53e01fc 137 SUPERFAMILY SSF52821 9 130 6.81E-33 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily TVD_04175 97f7489fc1ebd5e5eb5ce707c53e01fc 137 SMART SM00450 21 126 2.0E-21 T 11-10-2018 IPR001763 Rhodanese-like domain TVD_04970 5418873f8d18b8c1689f473d5a0da69a 457 Pfam PF00209 Sodium:neurotransmitter symporter family 156 375 4.2E-16 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TVD_04970 5418873f8d18b8c1689f473d5a0da69a 457 Pfam PF00209 Sodium:neurotransmitter symporter family 9 126 9.1E-22 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TVD_04970 5418873f8d18b8c1689f473d5a0da69a 457 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 44 63 3.3E-13 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TVD_04970 5418873f8d18b8c1689f473d5a0da69a 457 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 258 278 3.3E-13 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TVD_04970 5418873f8d18b8c1689f473d5a0da69a 457 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 15 36 3.3E-13 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TVD_04970 5418873f8d18b8c1689f473d5a0da69a 457 SUPERFAMILY SSF161070 9 452 1.24E-108 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 TVD_04970 5418873f8d18b8c1689f473d5a0da69a 457 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 31 45 - T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TVD_10030 49e66a48f7eced77a81dd24ab86def9a 105 Pfam PF09723 Zinc ribbon domain 1 41 7.7E-18 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain TVD_10030 49e66a48f7eced77a81dd24ab86def9a 105 SMART SM00834 1 42 1.7E-20 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain TVD_10030 49e66a48f7eced77a81dd24ab86def9a 105 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 1.7E-21 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain TVD_11220 7dd2298dc2ac93f77d904231220b497f 129 Gene3D G3DSA:3.30.1330.40 1 127 5.6E-54 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TVD_11220 7dd2298dc2ac93f77d904231220b497f 129 SUPERFAMILY SSF55298 1 127 3.61E-48 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TVD_11220 7dd2298dc2ac93f77d904231220b497f 129 Pfam PF01042 Endoribonuclease L-PSP 8 125 6.6E-43 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 TVD_11220 7dd2298dc2ac93f77d904231220b497f 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 TVD_11220 7dd2298dc2ac93f77d904231220b497f 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 124 3.1E-50 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 TVD_12920 558c687aba7154d366f5dbdafa931b5e 231 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 105 116 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_12920 558c687aba7154d366f5dbdafa931b5e 231 SUPERFAMILY SSF54862 1 202 8.79E-69 T 11-10-2018 TVD_12920 558c687aba7154d366f5dbdafa931b5e 231 Gene3D G3DSA:3.30.70.20 1 230 2.5E-66 T 11-10-2018 TVD_12920 558c687aba7154d366f5dbdafa931b5e 231 Pfam PF13247 4Fe-4S dicluster domain 68 166 1.8E-22 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TVD_08770 95c27dea4e7eaf1cb9ff16d71194a646 196 Pfam PF02517 CAAX protease self-immunity 95 179 2.0E-21 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 TVD_06850 8fd98fe1a762084b7fa30f8b5da175b9 102 Pfam PF01541 GIY-YIG catalytic domain 9 74 6.2E-9 T 11-10-2018 IPR000305 GIY-YIG endonuclease TVD_06850 8fd98fe1a762084b7fa30f8b5da175b9 102 Gene3D G3DSA:3.40.1440.10 2 97 1.3E-22 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TVD_06850 8fd98fe1a762084b7fa30f8b5da175b9 102 SUPERFAMILY SSF82771 8 76 1.44E-9 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TVD_00155 d3c9376b9517baf721fb7c1ebc503571 145 SUPERFAMILY SSF54690 10 141 7.85E-42 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 TVD_00155 d3c9376b9517baf721fb7c1ebc503571 145 Gene3D G3DSA:3.90.1170.40 3 143 4.3E-42 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 TVD_00155 d3c9376b9517baf721fb7c1ebc503571 145 Pfam PF02391 MoaE protein 17 121 1.7E-30 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 TVD_11420 f9b00b49f76d7961f9e0a1f99599ba77 153 Gene3D G3DSA:3.30.420.10 2 147 1.5E-60 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TVD_11420 f9b00b49f76d7961f9e0a1f99599ba77 153 Hamap MF_00042 Ribonuclease H [rnhA]. 3 151 35.584 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 TVD_11420 f9b00b49f76d7961f9e0a1f99599ba77 153 Pfam PF00075 RNase H 4 142 1.6E-49 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 TVD_11420 f9b00b49f76d7961f9e0a1f99599ba77 153 SUPERFAMILY SSF53098 4 143 3.29E-58 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_07480 c5e193776c1706c5f37994ad46435311 498 Pfam PF01565 FAD binding domain 55 194 1.2E-41 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TVD_07480 c5e193776c1706c5f37994ad46435311 498 SUPERFAMILY SSF55103 204 473 3.76E-74 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 TVD_07480 c5e193776c1706c5f37994ad46435311 498 SUPERFAMILY SSF56176 19 230 9.35E-70 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TVD_07480 c5e193776c1706c5f37994ad46435311 498 Gene3D G3DSA:1.10.45.10 431 471 1.7E-6 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 TVD_07480 c5e193776c1706c5f37994ad46435311 498 Gene3D G3DSA:3.30.465.40 18 246 1.9E-66 T 11-10-2018 TVD_07480 c5e193776c1706c5f37994ad46435311 498 Gene3D G3DSA:3.30.70.2740 349 430 8.3E-8 T 11-10-2018 TVD_07480 c5e193776c1706c5f37994ad46435311 498 Pfam PF02913 FAD linked oxidases, C-terminal domain 230 469 7.5E-64 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 TVD_03800 78fd2b2a53768608a3b08c66fe56d86b 434 Gene3D G3DSA:3.40.30.10 273 434 7.2E-39 T 11-10-2018 TVD_03800 78fd2b2a53768608a3b08c66fe56d86b 434 ProSitePatterns PS00194 Thioredoxin family active site. 320 338 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TVD_03800 78fd2b2a53768608a3b08c66fe56d86b 434 SUPERFAMILY SSF52833 288 432 2.13E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_03800 78fd2b2a53768608a3b08c66fe56d86b 434 Pfam PF00578 AhpC/TSA family 295 409 6.5E-24 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TVD_08740 8b6c7417baa80a6298a3c5f0192900b1 177 Gene3D G3DSA:3.40.220.10 2 174 2.3E-54 T 11-10-2018 TVD_08740 8b6c7417baa80a6298a3c5f0192900b1 177 SMART SM00506 9 138 5.8E-36 T 11-10-2018 IPR002589 Macro domain TVD_08740 8b6c7417baa80a6298a3c5f0192900b1 177 Pfam PF01661 Macro domain 27 138 7.9E-36 T 11-10-2018 IPR002589 Macro domain TVD_08740 8b6c7417baa80a6298a3c5f0192900b1 177 SUPERFAMILY SSF52949 3 173 2.02E-51 T 11-10-2018 TVD_09195 56260b1727718e296c1227de0ba61f0d 96 Gene3D G3DSA:3.40.1440.10 1 93 1.5E-20 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TVD_09195 56260b1727718e296c1227de0ba61f0d 96 SUPERFAMILY SSF82771 3 90 3.14E-20 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 TVD_09195 56260b1727718e296c1227de0ba61f0d 96 Pfam PF01541 GIY-YIG catalytic domain 4 69 5.4E-14 T 11-10-2018 IPR000305 GIY-YIG endonuclease TVD_00710 532c68533f67f990bd88f017e13bb126 218 Gene3D G3DSA:3.40.50.150 2 214 1.7E-44 T 11-10-2018 TVD_00710 532c68533f67f990bd88f017e13bb126 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 20 204 2.5E-26 T 11-10-2018 TVD_00710 532c68533f67f990bd88f017e13bb126 218 SUPERFAMILY SSF53335 1 208 6.6E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_06790 2f681526dbe713faf154b12e26c971c7 650 SMART SM00052 388 634 7.6E-112 T 11-10-2018 IPR001633 EAL domain TVD_06790 2f681526dbe713faf154b12e26c971c7 650 Gene3D G3DSA:3.20.20.450 392 643 2.4E-102 T 11-10-2018 IPR035919 EAL domain superfamily TVD_06790 2f681526dbe713faf154b12e26c971c7 650 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 207 376 1.3E-31 T 11-10-2018 IPR000160 GGDEF domain TVD_06790 2f681526dbe713faf154b12e26c971c7 650 SMART SM00267 196 378 4.2E-45 T 11-10-2018 IPR000160 GGDEF domain TVD_06790 2f681526dbe713faf154b12e26c971c7 650 Pfam PF00563 EAL domain 394 629 6.1E-79 T 11-10-2018 IPR001633 EAL domain TVD_06790 2f681526dbe713faf154b12e26c971c7 650 SUPERFAMILY SSF55073 212 380 1.33E-38 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_06790 2f681526dbe713faf154b12e26c971c7 650 Pfam PF00990 Diguanylate cyclase, GGDEF domain 208 373 1.7E-39 T 11-10-2018 IPR000160 GGDEF domain TVD_06790 2f681526dbe713faf154b12e26c971c7 650 Gene3D G3DSA:3.30.70.270 202 391 9.0E-50 T 11-10-2018 TVD_06790 2f681526dbe713faf154b12e26c971c7 650 SUPERFAMILY SSF141868 393 643 4.05E-89 T 11-10-2018 IPR035919 EAL domain superfamily TVD_09580 7289d90c8fb4d98cec42f8f6ae7e0237 517 Pfam PF01464 Transglycosylase SLT domain 333 441 6.4E-22 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 TVD_09580 7289d90c8fb4d98cec42f8f6ae7e0237 517 SUPERFAMILY SSF53955 329 507 2.16E-35 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TVD_09580 7289d90c8fb4d98cec42f8f6ae7e0237 517 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 351 379 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 TVD_09580 7289d90c8fb4d98cec42f8f6ae7e0237 517 SUPERFAMILY SSF53850 75 310 7.39E-14 T 11-10-2018 TVD_09580 7289d90c8fb4d98cec42f8f6ae7e0237 517 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 77 307 5.6E-6 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TVD_09580 7289d90c8fb4d98cec42f8f6ae7e0237 517 Gene3D G3DSA:1.10.530.10 326 503 1.4E-34 T 11-10-2018 TVD_00620 402a0b818f58b73ee30cf3187c5b997f 207 SUPERFAMILY SSF64438 29 176 2.01E-47 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic TVD_00620 402a0b818f58b73ee30cf3187c5b997f 207 Gene3D G3DSA:3.30.1330.200 27 185 1.6E-50 T 11-10-2018 IPR038592 CheD-like superfamily TVD_00620 402a0b818f58b73ee30cf3187c5b997f 207 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 23 179 28.416 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 TVD_00620 402a0b818f58b73ee30cf3187c5b997f 207 Pfam PF03975 CheD chemotactic sensory transduction 71 175 3.5E-31 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 TVD_12605 f4905f689638ff3992ee3f9ae27d3c8c 248 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 22 246 1.1E-41 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TVD_12605 f4905f689638ff3992ee3f9ae27d3c8c 248 Gene3D G3DSA:2.40.240.20 1 71 2.7E-12 T 11-10-2018 TVD_12605 f4905f689638ff3992ee3f9ae27d3c8c 248 Pfam PF04452 RNA methyltransferase 23 241 8.8E-55 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TVD_12605 f4905f689638ff3992ee3f9ae27d3c8c 248 SUPERFAMILY SSF75217 77 246 8.29E-42 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases TVD_12605 f4905f689638ff3992ee3f9ae27d3c8c 248 Gene3D G3DSA:3.40.1280.10 76 248 4.6E-48 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TVD_12605 f4905f689638ff3992ee3f9ae27d3c8c 248 PIRSF PIRSF015601 3 246 2.8E-47 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 TVD_12605 f4905f689638ff3992ee3f9ae27d3c8c 248 SUPERFAMILY SSF88697 10 66 1.12E-7 T 11-10-2018 IPR015947 PUA-like superfamily TVD_08020 d58dabb9304f7ef769664fc89e18b6ae 206 Pfam PF07681 DoxX 26 113 6.1E-18 T 11-10-2018 IPR032808 DoxX family TVD_09025 6d9241ac3e716da8343ad6206e9c0d4c 264 SUPERFAMILY SSF53213 6 252 3.14E-75 T 11-10-2018 TVD_09025 6d9241ac3e716da8343ad6206e9c0d4c 264 Gene3D G3DSA:3.40.830.10 1 261 2.0E-79 T 11-10-2018 TVD_09025 6d9241ac3e716da8343ad6206e9c0d4c 264 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 40 245 1.0E-31 T 11-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 TVD_09025 6d9241ac3e716da8343ad6206e9c0d4c 264 PIRSF PIRSF006157 1 264 4.3E-78 T 11-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 TVD_07175 10f7e6aa16c3daf4a4086cf3636c4913 130 Pfam PF09345 Domain of unknown function (DUF1987) 10 128 7.1E-42 T 11-10-2018 IPR018530 Domain of unknown function DUF1987 TVD_12490 0567ad660efc49e51a5c1a60862dea91 344 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 64 8.1E-18 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 TVD_12490 0567ad660efc49e51a5c1a60862dea91 344 Gene3D G3DSA:3.40.1030.10 72 343 4.9E-107 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TVD_12490 0567ad660efc49e51a5c1a60862dea91 344 SUPERFAMILY SSF47648 3 70 4.71E-19 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TVD_12490 0567ad660efc49e51a5c1a60862dea91 344 Gene3D G3DSA:1.20.970.10 1 70 1.7E-26 T 11-10-2018 TVD_12490 0567ad660efc49e51a5c1a60862dea91 344 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 334 38.987 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 TVD_12490 0567ad660efc49e51a5c1a60862dea91 344 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 333 1.0E-128 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 TVD_12490 0567ad660efc49e51a5c1a60862dea91 344 Pfam PF00591 Glycosyl transferase family, a/b domain 75 324 1.2E-98 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 TVD_12490 0567ad660efc49e51a5c1a60862dea91 344 SUPERFAMILY SSF52418 75 337 2.09E-95 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 TVD_08725 4618b3e8b4698eec91bcd77aa6891365 145 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 97 5.2E-23 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain TVD_08725 4618b3e8b4698eec91bcd77aa6891365 145 SUPERFAMILY SSF53927 3 142 7.53E-40 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TVD_08725 4618b3e8b4698eec91bcd77aa6891365 145 Gene3D G3DSA:3.40.140.10 1 145 1.8E-43 T 11-10-2018 TVD_08725 4618b3e8b4698eec91bcd77aa6891365 145 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 86 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TVD_10480 f81886a45f1e05cc1d2d24b1abd45f6a 159 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 18 148 2.6E-36 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 TVD_10480 f81886a45f1e05cc1d2d24b1abd45f6a 159 Gene3D G3DSA:3.40.630.30 9 155 1.7E-39 T 11-10-2018 TVD_10480 f81886a45f1e05cc1d2d24b1abd45f6a 159 SUPERFAMILY SSF55729 10 151 8.97E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_10480 f81886a45f1e05cc1d2d24b1abd45f6a 159 Pfam PF00583 Acetyltransferase (GNAT) family 37 127 2.1E-11 T 11-10-2018 IPR000182 GNAT domain TVD_09000 2ed161068e48cfa4cd7b5ec92350cfa0 231 Gene3D G3DSA:2.40.33.20 1 230 2.5E-80 T 11-10-2018 TVD_09000 2ed161068e48cfa4cd7b5ec92350cfa0 231 Pfam PF03473 MOSC domain 49 164 1.2E-21 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 TVD_09000 2ed161068e48cfa4cd7b5ec92350cfa0 231 Pfam PF03475 3-alpha domain 174 214 3.3E-10 T 11-10-2018 IPR005163 3-alpha domain TVD_09000 2ed161068e48cfa4cd7b5ec92350cfa0 231 SUPERFAMILY SSF50800 4 226 3.77E-68 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily TVD_04275 922875e397d73134a8a68c0b34b6126a 173 PIRSF PIRSF006162 12 169 1.3E-46 T 11-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 TVD_04275 922875e397d73134a8a68c0b34b6126a 173 SUPERFAMILY SSF101307 17 162 1.05E-41 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 TVD_04275 922875e397d73134a8a68c0b34b6126a 173 Pfam PF04608 Phosphatidylglycerophosphatase A 23 161 9.5E-48 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 TVD_11720 2e9c9502a0810fbfe120491443ac335e 100 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 23 99 3.0E-20 T 11-10-2018 IPR006260 TonB/TolA, C-terminal TVD_11720 2e9c9502a0810fbfe120491443ac335e 100 SUPERFAMILY SSF74653 17 97 2.88E-24 T 11-10-2018 TVD_11720 2e9c9502a0810fbfe120491443ac335e 100 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 21 98 5.6E-21 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 TVD_11720 2e9c9502a0810fbfe120491443ac335e 100 Gene3D G3DSA:3.30.1150.10 8 99 5.2E-24 T 11-10-2018 TVD_03470 5205c2d3b200ceb4bfb3254f0613367e 804 SMART SM00487 156 373 1.8E-16 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain TVD_03470 5205c2d3b200ceb4bfb3254f0613367e 804 Gene3D G3DSA:3.40.50.300 356 563 6.6E-51 T 11-10-2018 TVD_03470 5205c2d3b200ceb4bfb3254f0613367e 804 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 43 112 3.7E-7 T 11-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain TVD_03470 5205c2d3b200ceb4bfb3254f0613367e 804 Gene3D G3DSA:3.90.1570.30 1 134 3.7E-41 T 11-10-2018 TVD_03470 5205c2d3b200ceb4bfb3254f0613367e 804 SUPERFAMILY SSF52540 173 538 8.8E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_03470 5205c2d3b200ceb4bfb3254f0613367e 804 Gene3D G3DSA:3.40.50.300 142 355 1.2E-70 T 11-10-2018 TVD_03470 5205c2d3b200ceb4bfb3254f0613367e 804 Pfam PF08463 EcoEI R protein C-terminal 649 804 6.5E-26 T 11-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 TVD_03470 5205c2d3b200ceb4bfb3254f0613367e 804 Pfam PF00271 Helicase conserved C-terminal domain 425 530 2.3E-7 T 11-10-2018 IPR001650 Helicase, C-terminal TVD_03470 5205c2d3b200ceb4bfb3254f0613367e 804 Pfam PF04851 Type III restriction enzyme, res subunit 160 339 1.4E-33 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 TVD_08890 ec40436fd2db4c7eccf9f7e3712ab904 144 PRINTS PR00421 Thioredoxin family signature 60 68 9.0E-9 T 11-10-2018 TVD_08890 ec40436fd2db4c7eccf9f7e3712ab904 144 PRINTS PR00421 Thioredoxin family signature 108 119 9.0E-9 T 11-10-2018 TVD_08890 ec40436fd2db4c7eccf9f7e3712ab904 144 PRINTS PR00421 Thioredoxin family signature 68 77 9.0E-9 T 11-10-2018 TVD_08890 ec40436fd2db4c7eccf9f7e3712ab904 144 Gene3D G3DSA:3.40.30.10 39 144 8.6E-30 T 11-10-2018 TVD_08890 ec40436fd2db4c7eccf9f7e3712ab904 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 142 3.7E-30 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TVD_08890 ec40436fd2db4c7eccf9f7e3712ab904 144 Gene3D G3DSA:2.20.28.140 2 38 2.6E-14 T 11-10-2018 TVD_08890 ec40436fd2db4c7eccf9f7e3712ab904 144 ProSitePatterns PS00194 Thioredoxin family active site. 61 79 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TVD_08890 ec40436fd2db4c7eccf9f7e3712ab904 144 PIRSF PIRSF000077 39 144 5.0E-30 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TVD_08890 ec40436fd2db4c7eccf9f7e3712ab904 144 Pfam PF00085 Thioredoxin 42 141 2.5E-27 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 TVD_08890 ec40436fd2db4c7eccf9f7e3712ab904 144 SUPERFAMILY SSF52833 28 143 1.13E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_13000 1c946ed40b26b93e4c0cd84f73163750 289 Gene3D G3DSA:3.90.1200.10 195 274 1.4E-8 T 11-10-2018 TVD_06205 caa83d95ea385c4c1b66a6b48dba94e7 334 SUPERFAMILY SSF51569 4 333 1.05E-131 T 11-10-2018 TVD_06205 caa83d95ea385c4c1b66a6b48dba94e7 334 ProSitePatterns PS00158 Fructose-bisphosphate aldolase class-I active site. 211 221 - T 11-10-2018 IPR029768 Fructose-bisphosphate aldolase class-I active site KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_06205 caa83d95ea385c4c1b66a6b48dba94e7 334 Pfam PF00274 Fructose-bisphosphate aldolase class-I 6 332 5.6E-140 T 11-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_06205 caa83d95ea385c4c1b66a6b48dba94e7 334 Gene3D G3DSA:3.20.20.70 2 334 1.4E-152 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_12685 e79b49b84111ad19c823858cf9679497 430 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 46 421 1.1E-91 T 11-10-2018 TVD_12685 e79b49b84111ad19c823858cf9679497 430 Pfam PF01979 Amidohydrolase family 53 421 2.7E-24 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TVD_12685 e79b49b84111ad19c823858cf9679497 430 Gene3D G3DSA:2.30.40.10 9 420 3.5E-112 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TVD_12685 e79b49b84111ad19c823858cf9679497 430 SUPERFAMILY SSF51556 56 366 2.69E-88 T 11-10-2018 IPR032466 Metal-dependent hydrolase TVD_12685 e79b49b84111ad19c823858cf9679497 430 Gene3D G3DSA:3.20.20.140 57 368 3.5E-112 T 11-10-2018 TVD_12685 e79b49b84111ad19c823858cf9679497 430 SUPERFAMILY SSF51338 1 423 2.59E-23 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 TVD_00635 b40c8f81baf3f542d5cae6200df50909 259 PIRSF PIRSF009320 1 49 2.8E-14 T 11-10-2018 TVD_00635 b40c8f81baf3f542d5cae6200df50909 259 PIRSF PIRSF009320 65 252 7.0E-9 T 11-10-2018 TVD_00635 b40c8f81baf3f542d5cae6200df50909 259 Gene3D G3DSA:3.40.50.300 1 251 5.3E-68 T 11-10-2018 TVD_00635 b40c8f81baf3f542d5cae6200df50909 259 SUPERFAMILY SSF52540 1 245 1.01E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_00635 b40c8f81baf3f542d5cae6200df50909 259 Pfam PF13614 AAA domain 1 167 3.0E-41 T 11-10-2018 IPR025669 AAA domain TVD_03205 17bef0377adbad89069cfc9a40a65643 94 Gene3D G3DSA:1.10.287.700 6 76 6.5E-5 T 11-10-2018 TVD_10550 711b3510c39af90b355482505b1fdb3c 289 SUPERFAMILY SSF53850 24 287 1.71E-74 T 11-10-2018 TVD_10550 711b3510c39af90b355482505b1fdb3c 289 Gene3D G3DSA:3.40.190.100 109 221 2.8E-87 T 11-10-2018 TVD_10550 711b3510c39af90b355482505b1fdb3c 289 Gene3D G3DSA:3.40.190.10 28 284 2.8E-87 T 11-10-2018 TVD_10550 711b3510c39af90b355482505b1fdb3c 289 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 274 4.2E-61 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 TVD_07145 2934cf8c4fb02dba0c77eea6eb86932b 135 Pfam PF04977 Septum formation initiator 11 88 1.3E-25 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC TVD_07145 2934cf8c4fb02dba0c77eea6eb86932b 135 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 32.362 T 11-10-2018 IPR023081 Cell division protein FtsB TVD_11310 221807a736774f4ecc9acfe32f71cca3 319 Pfam PF00849 RNA pseudouridylate synthase 90 239 5.3E-34 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_11310 221807a736774f4ecc9acfe32f71cca3 319 Pfam PF01479 S4 domain 16 62 1.5E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_11310 221807a736774f4ecc9acfe32f71cca3 319 SUPERFAMILY SSF55174 14 102 8.1E-9 T 11-10-2018 TVD_11310 221807a736774f4ecc9acfe32f71cca3 319 SUPERFAMILY SSF55120 76 312 1.83E-79 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_11310 221807a736774f4ecc9acfe32f71cca3 319 Gene3D G3DSA:3.30.2350.10 82 313 2.9E-77 T 11-10-2018 TVD_11310 221807a736774f4ecc9acfe32f71cca3 319 SMART SM00363 16 76 0.0096 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_11310 221807a736774f4ecc9acfe32f71cca3 319 Gene3D G3DSA:3.10.290.10 5 68 5.6E-17 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TVD_11310 221807a736774f4ecc9acfe32f71cca3 319 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 11 310 2.1E-94 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_11310 221807a736774f4ecc9acfe32f71cca3 319 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 132 146 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 TVD_01105 7638dd9eedecd486f6f5db57d22df4a7 360 Gene3D G3DSA:3.20.20.450 105 353 3.4E-60 T 11-10-2018 IPR035919 EAL domain superfamily TVD_01105 7638dd9eedecd486f6f5db57d22df4a7 360 SUPERFAMILY SSF141868 112 351 8.37E-62 T 11-10-2018 IPR035919 EAL domain superfamily TVD_01105 7638dd9eedecd486f6f5db57d22df4a7 360 Pfam PF00563 EAL domain 112 347 5.9E-58 T 11-10-2018 IPR001633 EAL domain TVD_01105 7638dd9eedecd486f6f5db57d22df4a7 360 SMART SM00052 107 352 2.2E-38 T 11-10-2018 IPR001633 EAL domain TVD_05065 bb9f7fc58002010f4ba0c1060428057d 150 SMART SM01321 17 129 1.2E-24 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 TVD_05065 bb9f7fc58002010f4ba0c1060428057d 150 SUPERFAMILY SSF143422 10 135 1.1E-24 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TVD_05065 bb9f7fc58002010f4ba0c1060428057d 150 Gene3D G3DSA:3.30.70.1290 10 149 8.4E-29 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TVD_05065 bb9f7fc58002010f4ba0c1060428057d 150 Pfam PF01797 Transposase IS200 like 22 128 2.2E-9 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 320 342 4.4E-38 T 11-10-2018 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 202 220 4.4E-38 T 11-10-2018 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 306 4.4E-38 T 11-10-2018 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 63 82 4.4E-38 T 11-10-2018 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 4.4E-38 T 11-10-2018 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 63 367 3.0E-120 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 Gene3D G3DSA:3.50.50.60 64 366 4.9E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_09150 c74341efc561d8854772a9c1e923ad39 371 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 190 210 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 63 355 2.6E-45 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 Gene3D G3DSA:3.50.50.60 172 298 4.9E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_09150 c74341efc561d8854772a9c1e923ad39 371 SUPERFAMILY SSF51905 53 368 1.21E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily TVD_09150 c74341efc561d8854772a9c1e923ad39 371 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 161 169 8.2E-78 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 116 126 8.2E-78 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 292 313 8.2E-78 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 84 8.2E-78 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 95 110 8.2E-78 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 183 195 8.2E-78 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 222 8.2E-78 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 253 269 8.2E-78 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TVD_09150 c74341efc561d8854772a9c1e923ad39 371 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 330 348 8.2E-78 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TVD_05895 f96d029b5965782b6a3b493d07e76dae 96 SUPERFAMILY SSF81301 3 94 2.2E-19 T 11-10-2018 TVD_05895 f96d029b5965782b6a3b493d07e76dae 96 Pfam PF01909 Nucleotidyltransferase domain 20 82 2.6E-9 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TVD_05895 f96d029b5965782b6a3b493d07e76dae 96 Gene3D G3DSA:3.30.460.10 2 95 5.8E-23 T 11-10-2018 TVD_05890 e9efc81e48872d8a5983440b3f1202c8 632 SUPERFAMILY SSF56349 116 331 3.36E-14 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TVD_05890 e9efc81e48872d8a5983440b3f1202c8 632 Pfam PF00589 Phage integrase family 123 262 1.0E-5 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TVD_13385 b9c38d59964db5f20edf7dcebc71f94a 179 Pfam PF00498 FHA domain 68 130 5.1E-16 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 TVD_13385 b9c38d59964db5f20edf7dcebc71f94a 179 SUPERFAMILY SSF49879 31 137 1.19E-25 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 TVD_13385 b9c38d59964db5f20edf7dcebc71f94a 179 SMART SM00240 66 116 6.9E-9 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 TVD_13385 b9c38d59964db5f20edf7dcebc71f94a 179 Gene3D G3DSA:2.60.200.20 20 147 9.6E-29 T 11-10-2018 TVD_09320 0dbe63a62bc2cb22bfb7bb19753f63b6 331 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 209 324 2.6E-15 T 11-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein TVD_09320 0dbe63a62bc2cb22bfb7bb19753f63b6 331 Pfam PF13244 Domain of unknown function (DUF4040) 15 79 2.0E-19 T 11-10-2018 IPR025383 Domain of unknown function DUF4040 TVD_03380 709fd89be10187602749612d6c0ebe5a 250 Pfam PF09335 SNARE associated Golgi protein 67 183 3.3E-22 T 11-10-2018 IPR032816 SNARE associated Golgi protein TVD_03760 5417f1e98bb54fe8d016c691c23a62ea 860 Gene3D G3DSA:3.20.20.450 622 856 4.4E-72 T 11-10-2018 IPR035919 EAL domain superfamily TVD_03760 5417f1e98bb54fe8d016c691c23a62ea 860 SMART SM00052 615 856 1.4E-58 T 11-10-2018 IPR001633 EAL domain TVD_03760 5417f1e98bb54fe8d016c691c23a62ea 860 SUPERFAMILY SSF55073 447 605 3.92E-47 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_03760 5417f1e98bb54fe8d016c691c23a62ea 860 SMART SM00267 431 604 9.7E-54 T 11-10-2018 IPR000160 GGDEF domain TVD_03760 5417f1e98bb54fe8d016c691c23a62ea 860 Gene3D G3DSA:3.30.70.270 436 610 2.0E-53 T 11-10-2018 TVD_03760 5417f1e98bb54fe8d016c691c23a62ea 860 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 438 603 7.8E-53 T 11-10-2018 IPR000160 GGDEF domain TVD_03760 5417f1e98bb54fe8d016c691c23a62ea 860 Pfam PF00990 Diguanylate cyclase, GGDEF domain 442 599 1.1E-46 T 11-10-2018 IPR000160 GGDEF domain TVD_03760 5417f1e98bb54fe8d016c691c23a62ea 860 Pfam PF00563 EAL domain 623 851 1.2E-61 T 11-10-2018 IPR001633 EAL domain TVD_03760 5417f1e98bb54fe8d016c691c23a62ea 860 SUPERFAMILY SSF141868 623 853 1.96E-67 T 11-10-2018 IPR035919 EAL domain superfamily TVD_05225 79c8aaa61707145006aa4a7cc0f4c15f 93 Gene3D G3DSA:1.10.260.40 13 92 5.7E-17 T 11-10-2018 TVD_05225 79c8aaa61707145006aa4a7cc0f4c15f 93 Pfam PF13560 Helix-turn-helix domain 34 82 9.3E-12 T 11-10-2018 TVD_05225 79c8aaa61707145006aa4a7cc0f4c15f 93 SUPERFAMILY SSF47413 20 90 2.62E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TVD_05225 79c8aaa61707145006aa4a7cc0f4c15f 93 SMART SM00530 33 88 1.7E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TVD_09430 6bde20fafbd8cde9f191280b6d9f84f6 211 PIRSF PIRSF009320 3 211 6.6E-38 T 11-10-2018 TVD_09430 6bde20fafbd8cde9f191280b6d9f84f6 211 Gene3D G3DSA:3.40.50.300 5 211 5.9E-51 T 11-10-2018 TVD_09430 6bde20fafbd8cde9f191280b6d9f84f6 211 SUPERFAMILY SSF52540 4 210 1.55E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_09430 6bde20fafbd8cde9f191280b6d9f84f6 211 Pfam PF13614 AAA domain 4 54 9.1E-15 T 11-10-2018 IPR025669 AAA domain TVD_09430 6bde20fafbd8cde9f191280b6d9f84f6 211 Pfam PF13614 AAA domain 69 131 9.7E-10 T 11-10-2018 IPR025669 AAA domain TVD_06455 ed42c1507ed465366390ad880eefefe0 416 Pfam PF12704 MacB-like periplasmic core domain 27 214 5.6E-17 T 11-10-2018 IPR025857 MacB-like periplasmic core domain TVD_06455 ed42c1507ed465366390ad880eefefe0 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 416 1.4E-151 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 TVD_06455 ed42c1507ed465366390ad880eefefe0 416 Pfam PF02687 FtsX-like permease family 303 409 6.5E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TVD_07040 279060934a67b4354e8389b89ccdb348 99 Pfam PF01909 Nucleotidyltransferase domain 11 78 5.2E-5 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TVD_07040 279060934a67b4354e8389b89ccdb348 99 SUPERFAMILY SSF81301 13 78 5.35E-8 T 11-10-2018 TVD_07040 279060934a67b4354e8389b89ccdb348 99 Gene3D G3DSA:3.30.460.10 1 99 4.9E-9 T 11-10-2018 TVD_00540 9e69d09f453771c000c50cb8fa67b10a 254 Gene3D G3DSA:2.40.10.120 14 254 5.4E-36 T 11-10-2018 TVD_00540 9e69d09f453771c000c50cb8fa67b10a 254 SUPERFAMILY SSF50494 24 252 4.38E-36 T 11-10-2018 IPR009003 Peptidase S1, PA clan TVD_00540 9e69d09f453771c000c50cb8fa67b10a 254 Pfam PF13365 Trypsin-like peptidase domain 53 216 2.1E-24 T 11-10-2018 TVD_06210 6995e9fff616f5646e5f79a3e514ec00 577 Gene3D G3DSA:3.90.780.10 387 572 1.1E-64 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TVD_06210 6995e9fff616f5646e5f79a3e514ec00 577 Gene3D G3DSA:3.60.21.10 106 386 1.9E-76 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like TVD_06210 6995e9fff616f5646e5f79a3e514ec00 577 Pfam PF02872 5'-nucleotidase, C-terminal domain 404 528 4.6E-17 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TVD_06210 6995e9fff616f5646e5f79a3e514ec00 577 SUPERFAMILY SSF55816 384 559 2.22E-32 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TVD_06210 6995e9fff616f5646e5f79a3e514ec00 577 SUPERFAMILY SSF56300 43 386 2.61E-77 T 11-10-2018 TVD_06210 6995e9fff616f5646e5f79a3e514ec00 577 PRINTS PR01607 Apyrase family signature 291 314 9.0E-10 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TVD_06210 6995e9fff616f5646e5f79a3e514ec00 577 PRINTS PR01607 Apyrase family signature 46 64 9.0E-10 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TVD_06210 6995e9fff616f5646e5f79a3e514ec00 577 PRINTS PR01607 Apyrase family signature 324 344 9.0E-10 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TVD_06210 6995e9fff616f5646e5f79a3e514ec00 577 PRINTS PR01607 Apyrase family signature 272 289 9.0E-10 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 TVD_06210 6995e9fff616f5646e5f79a3e514ec00 577 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 4 568 7.2E-245 T 11-10-2018 IPR030998 Thiosulfohydrolase SoxB TVD_06290 13f2292e87254b9b99d7bf3a076e1dfb 202 PRINTS PR00956 Flagellar motor switch protein FliN signature 139 155 2.6E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TVD_06290 13f2292e87254b9b99d7bf3a076e1dfb 202 PRINTS PR00956 Flagellar motor switch protein FliN signature 122 138 2.6E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TVD_06290 13f2292e87254b9b99d7bf3a076e1dfb 202 PRINTS PR00956 Flagellar motor switch protein FliN signature 155 168 2.6E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TVD_06290 13f2292e87254b9b99d7bf3a076e1dfb 202 PRINTS PR00956 Flagellar motor switch protein FliN signature 168 183 2.6E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TVD_06290 13f2292e87254b9b99d7bf3a076e1dfb 202 Gene3D G3DSA:2.30.330.10 111 202 2.1E-34 T 11-10-2018 IPR036429 SpoA-like superfamily TVD_06290 13f2292e87254b9b99d7bf3a076e1dfb 202 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 119 194 4.7E-33 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 TVD_06290 13f2292e87254b9b99d7bf3a076e1dfb 202 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 122 192 1.3E-24 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) TVD_06290 13f2292e87254b9b99d7bf3a076e1dfb 202 SUPERFAMILY SSF101801 118 201 1.7E-25 T 11-10-2018 IPR036429 SpoA-like superfamily TVD_05865 58a28b30d1f239234c240972868fe616 207 Gene3D G3DSA:3.40.50.150 3 194 2.8E-27 T 11-10-2018 TVD_05865 58a28b30d1f239234c240972868fe616 207 Pfam PF13649 Methyltransferase domain 31 127 3.7E-12 T 11-10-2018 TVD_05865 58a28b30d1f239234c240972868fe616 207 SUPERFAMILY SSF53335 6 189 1.41E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_07895 5d087003dea07a8dfff95325ee86069e 414 Pfam PF07559 Flagellar basal body protein FlaE 174 295 5.1E-23 T 11-10-2018 IPR011491 Flagellar hook protein FlgE TVD_07895 5d087003dea07a8dfff95325ee86069e 414 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 396 1.9E-102 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G TVD_07895 5d087003dea07a8dfff95325ee86069e 414 Pfam PF00460 Flagella basal body rod protein 3 33 6.9E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TVD_07895 5d087003dea07a8dfff95325ee86069e 414 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 335 413 3.1E-19 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TVD_07895 5d087003dea07a8dfff95325ee86069e 414 Gene3D G3DSA:2.60.98.20 145 296 5.3E-30 T 11-10-2018 IPR037058 Flagellar hook protein FlgE superfamily TVD_07895 5d087003dea07a8dfff95325ee86069e 414 SUPERFAMILY SSF117143 80 375 3.79E-75 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like TVD_08700 6a725caeeaa131fb60dc2ee51e8835df 167 SUPERFAMILY SSF75169 50 165 2.44E-14 T 11-10-2018 IPR027396 DsrEFH-like TVD_08700 6a725caeeaa131fb60dc2ee51e8835df 167 Gene3D G3DSA:3.40.1260.10 48 167 1.5E-13 T 11-10-2018 IPR027396 DsrEFH-like TVD_08700 6a725caeeaa131fb60dc2ee51e8835df 167 Pfam PF02635 DsrE/DsrF-like family 50 166 9.5E-11 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_00410 b415d534bcf1b0e1939a67cbdb5513a8 274 SUPERFAMILY SSF55729 129 267 6.35E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_00410 b415d534bcf1b0e1939a67cbdb5513a8 274 Gene3D G3DSA:3.40.630.30 9 264 2.5E-27 T 11-10-2018 TVD_07500 ac157cff156272d353fb18f28da2f502 67 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 9.8E-12 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 TVD_04650 6a750f5670198e129213779ebfac24df 160 Pfam PF09523 Protein of unknown function (DUF2390) 17 111 2.5E-19 T 11-10-2018 IPR012659 Conserved hypothetical protein CHP02444 TVD_06880 c89edd0edfe44379881ba49332c34bf2 278 SUPERFAMILY SSF53474 23 275 1.26E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_06880 c89edd0edfe44379881ba49332c34bf2 278 Gene3D G3DSA:3.40.50.1820 38 274 3.4E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_06880 c89edd0edfe44379881ba49332c34bf2 278 Pfam PF12697 Alpha/beta hydrolase family 41 257 3.0E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TVD_05565 db52988c3ed9aa881f22befca5981019 340 Pfam PF01882 Protein of unknown function DUF58 226 300 1.1E-13 T 11-10-2018 IPR002881 Domain of unknown function DUF58 TVD_02580 3b2b8f0712666bb14dd43d531a7d99a6 140 SUPERFAMILY SSF102400 1 139 9.68E-39 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily TVD_02580 3b2b8f0712666bb14dd43d531a7d99a6 140 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 134 2.5E-36 T 11-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 TVD_02580 3b2b8f0712666bb14dd43d531a7d99a6 140 Gene3D G3DSA:3.40.50.10110 1 139 2.4E-40 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily TVD_01640 c03d57640a5a3d13bac12f90f076f80d 234 Gene3D G3DSA:1.25.40.10 54 232 6.0E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_01640 c03d57640a5a3d13bac12f90f076f80d 234 Pfam PF13525 Outer membrane lipoprotein 54 226 5.7E-23 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like TVD_12715 cc1cbf163b373d888466e4fad7add4f2 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 6 270 27.125 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TVD_12715 cc1cbf163b373d888466e4fad7add4f2 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 226 248 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TVD_12715 cc1cbf163b373d888466e4fad7add4f2 272 SUPERFAMILY SSF48179 165 271 3.57E-35 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 TVD_12715 cc1cbf163b373d888466e4fad7add4f2 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 8 270 1.2E-80 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TVD_12715 cc1cbf163b373d888466e4fad7add4f2 272 SUPERFAMILY SSF51735 8 163 1.62E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_12715 cc1cbf163b373d888466e4fad7add4f2 272 PIRSF PIRSF000193 5 272 5.0E-78 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TVD_12715 cc1cbf163b373d888466e4fad7add4f2 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 166 270 3.3E-35 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 TVD_12715 cc1cbf163b373d888466e4fad7add4f2 272 Gene3D G3DSA:3.40.50.720 6 167 9.9E-49 T 11-10-2018 TVD_12715 cc1cbf163b373d888466e4fad7add4f2 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 8 102 7.0E-18 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal TVD_12715 cc1cbf163b373d888466e4fad7add4f2 272 Gene3D G3DSA:1.10.3730.10 168 272 1.6E-39 T 11-10-2018 TVD_10520 f4fe1614e8b87272e4b441cdceb1c44d 389 Pfam PF00248 Aldo/keto reductase family 48 371 1.2E-16 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain TVD_10520 f4fe1614e8b87272e4b441cdceb1c44d 389 Gene3D G3DSA:3.20.20.100 35 382 3.4E-20 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TVD_10520 f4fe1614e8b87272e4b441cdceb1c44d 389 SUPERFAMILY SSF51430 39 371 4.71E-23 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TVD_04305 82c67eddbf9d416e539f9e1fa0650724 173 Gene3D G3DSA:3.90.1140.10 5 173 8.6E-38 T 11-10-2018 TVD_04305 82c67eddbf9d416e539f9e1fa0650724 173 SUPERFAMILY SSF55144 9 172 6.98E-33 T 11-10-2018 IPR009097 Cyclic phosphodiesterase TVD_04305 82c67eddbf9d416e539f9e1fa0650724 173 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 8 171 15.846 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 TVD_04305 82c67eddbf9d416e539f9e1fa0650724 173 Pfam PF13563 2'-5' RNA ligase superfamily 16 158 7.8E-11 T 11-10-2018 TVD_04305 82c67eddbf9d416e539f9e1fa0650724 173 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 9 172 1.5E-24 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 TVD_07825 7dc10d6d29afdce86f1e7b44baabfff9 499 Gene3D G3DSA:1.10.3210.10 309 499 2.4E-55 T 11-10-2018 TVD_07825 7dc10d6d29afdce86f1e7b44baabfff9 499 PIRSF PIRSF001267 1 499 5.3E-183 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 TVD_07825 7dc10d6d29afdce86f1e7b44baabfff9 499 Pfam PF02541 Ppx/GppA phosphatase family 23 307 9.0E-72 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 TVD_07825 7dc10d6d29afdce86f1e7b44baabfff9 499 SUPERFAMILY SSF53067 10 130 2.7E-33 T 11-10-2018 TVD_07825 7dc10d6d29afdce86f1e7b44baabfff9 499 Gene3D G3DSA:3.30.420.40 11 301 3.3E-86 T 11-10-2018 TVD_07825 7dc10d6d29afdce86f1e7b44baabfff9 499 SUPERFAMILY SSF109604 312 497 4.49E-42 T 11-10-2018 TVD_07825 7dc10d6d29afdce86f1e7b44baabfff9 499 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 10 305 6.3E-93 T 11-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 TVD_07825 7dc10d6d29afdce86f1e7b44baabfff9 499 Gene3D G3DSA:3.30.420.150 114 294 3.3E-86 T 11-10-2018 TVD_07825 7dc10d6d29afdce86f1e7b44baabfff9 499 SUPERFAMILY SSF53067 135 309 1.24E-45 T 11-10-2018 TVD_00140 a6c3928ae7e9153860f8cc0bfdd4ee04 143 SUPERFAMILY SSF49764 25 142 1.6E-40 T 11-10-2018 IPR008978 HSP20-like chaperone TVD_00140 a6c3928ae7e9153860f8cc0bfdd4ee04 143 Pfam PF00011 Hsp20/alpha crystallin family 42 141 6.0E-25 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain TVD_00140 a6c3928ae7e9153860f8cc0bfdd4ee04 143 Gene3D G3DSA:2.60.40.790 3 142 3.8E-39 T 11-10-2018 IPR008978 HSP20-like chaperone TVD_10645 bde499f82061ef3d03f165cf6f1f801d 468 Pfam PF02754 Cysteine-rich domain 281 378 1.0E-6 T 11-10-2018 IPR004017 Cysteine-rich domain TVD_04395 f8481e6a64688a4e6fc727c9227088eb 1150 SUPERFAMILY SSF52540 18 901 8.11E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04395 f8481e6a64688a4e6fc727c9227088eb 1150 Gene3D G3DSA:3.40.50.300 647 912 5.2E-14 T 11-10-2018 TVD_04395 f8481e6a64688a4e6fc727c9227088eb 1150 Gene3D G3DSA:3.40.50.300 1 324 1.4E-11 T 11-10-2018 TVD_04395 f8481e6a64688a4e6fc727c9227088eb 1150 Pfam PF13476 AAA domain 23 263 1.1E-7 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain TVD_12600 022f6c3a4dff069f723c18603b11b67e 284 Pfam PF02219 Methylenetetrahydrofolate reductase 4 278 7.8E-93 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 TVD_12600 022f6c3a4dff069f723c18603b11b67e 284 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 8 278 1.4E-104 T 11-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 TVD_12600 022f6c3a4dff069f723c18603b11b67e 284 SUPERFAMILY SSF51730 3 279 1.96E-97 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like TVD_12600 022f6c3a4dff069f723c18603b11b67e 284 Gene3D G3DSA:3.20.20.220 1 284 5.0E-103 T 11-10-2018 TVD_10740 9b466e7cec8871ba2ef8f4eefea5efe1 659 Pfam PF02384 N-6 DNA Methylase 155 452 7.8E-59 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TVD_10740 9b466e7cec8871ba2ef8f4eefea5efe1 659 Gene3D G3DSA:3.40.50.150 154 467 4.1E-92 T 11-10-2018 TVD_10740 9b466e7cec8871ba2ef8f4eefea5efe1 659 Pfam PF12161 HsdM N-terminal domain 11 140 1.1E-22 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain TVD_10740 9b466e7cec8871ba2ef8f4eefea5efe1 659 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 175 191 8.5E-11 T 11-10-2018 TVD_10740 9b466e7cec8871ba2ef8f4eefea5efe1 659 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 279 291 8.5E-11 T 11-10-2018 TVD_10740 9b466e7cec8871ba2ef8f4eefea5efe1 659 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 207 221 8.5E-11 T 11-10-2018 TVD_10740 9b466e7cec8871ba2ef8f4eefea5efe1 659 SUPERFAMILY SSF53335 8 537 5.4E-119 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_06445 60f1bc0d17fa9698e7a3a23c16978252 357 Gene3D G3DSA:3.75.10.10 11 355 1.2E-122 T 11-10-2018 TVD_06445 60f1bc0d17fa9698e7a3a23c16978252 357 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 348 8.3E-115 T 11-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 TVD_06445 60f1bc0d17fa9698e7a3a23c16978252 357 SUPERFAMILY SSF55909 5 349 3.75E-122 T 11-10-2018 TVD_06710 c3221dc42e722563236ca5c16ddeb4c3 270 Gene3D G3DSA:3.20.10.10 120 250 3.4E-30 T 11-10-2018 TVD_06710 c3221dc42e722563236ca5c16ddeb4c3 270 Gene3D G3DSA:3.30.470.10 2 108 8.8E-29 T 11-10-2018 TVD_06710 c3221dc42e722563236ca5c16ddeb4c3 270 SUPERFAMILY SSF56752 1 244 1.23E-52 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 TVD_06710 c3221dc42e722563236ca5c16ddeb4c3 270 Pfam PF01063 Amino-transferase class IV 24 241 4.9E-34 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 TVD_06710 c3221dc42e722563236ca5c16ddeb4c3 270 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 241 7.4E-53 T 11-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 TVD_12155 7b0d784702d468215ee3e74aa718c2a5 348 Gene3D G3DSA:3.30.420.40 13 332 3.1E-126 T 11-10-2018 TVD_12155 7b0d784702d468215ee3e74aa718c2a5 348 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.6E-153 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TVD_12155 7b0d784702d468215ee3e74aa718c2a5 348 Gene3D G3DSA:3.30.420.40 159 322 3.1E-126 T 11-10-2018 TVD_12155 7b0d784702d468215ee3e74aa718c2a5 348 Pfam PF06723 MreB/Mbl protein 10 339 5.0E-143 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TVD_12155 7b0d784702d468215ee3e74aa718c2a5 348 SUPERFAMILY SSF53067 9 153 3.61E-36 T 11-10-2018 TVD_12155 7b0d784702d468215ee3e74aa718c2a5 348 SUPERFAMILY SSF53067 155 340 8.87E-49 T 11-10-2018 TVD_12155 7b0d784702d468215ee3e74aa718c2a5 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 4.5E-59 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TVD_12155 7b0d784702d468215ee3e74aa718c2a5 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 4.5E-59 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TVD_12155 7b0d784702d468215ee3e74aa718c2a5 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 4.5E-59 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TVD_12155 7b0d784702d468215ee3e74aa718c2a5 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 4.5E-59 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TVD_12155 7b0d784702d468215ee3e74aa718c2a5 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 4.5E-59 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 TVD_12155 7b0d784702d468215ee3e74aa718c2a5 348 Gene3D G3DSA:3.90.640.10 191 264 3.1E-126 T 11-10-2018 TVD_06195 f8de612c8bd7f5146723ba3a5fb32d12 182 Pfam PF06271 RDD family 41 171 1.6E-28 T 11-10-2018 IPR010432 RDD TVD_06195 f8de612c8bd7f5146723ba3a5fb32d12 182 Pfam PF13240 zinc-ribbon domain 3 24 5.8E-7 T 11-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 TVD_07510 62e5bb3f0ec42dc336c8ad7483243cf7 218 Gene3D G3DSA:3.40.50.2020 3 201 4.9E-66 T 11-10-2018 TVD_07510 62e5bb3f0ec42dc336c8ad7483243cf7 218 SUPERFAMILY SSF53271 1 205 2.56E-44 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TVD_07510 62e5bb3f0ec42dc336c8ad7483243cf7 218 Gene3D G3DSA:3.30.1310.20 53 112 4.9E-66 T 11-10-2018 TVD_07510 62e5bb3f0ec42dc336c8ad7483243cf7 218 Pfam PF00156 Phosphoribosyl transferase domain 10 189 1.7E-20 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TVD_05910 dcb8cbc19abf7914e342e542bf4460e6 222 Gene3D G3DSA:3.90.1680.10 1 219 2.9E-62 T 11-10-2018 IPR036590 SOS response associated peptidase-like TVD_05910 dcb8cbc19abf7914e342e542bf4460e6 222 Pfam PF02586 SOS response associated peptidase (SRAP) 1 207 3.1E-52 T 11-10-2018 IPR003738 SOS response associated peptidase (SRAP) TVD_05910 dcb8cbc19abf7914e342e542bf4460e6 222 SUPERFAMILY SSF143081 2 212 1.29E-57 T 11-10-2018 IPR036590 SOS response associated peptidase-like TVD_06190 fbc817a127b763c3612f167eb3bd4472 520 SMART SM00155 170 197 3.6E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TVD_06190 fbc817a127b763c3612f167eb3bd4472 520 SMART SM00155 413 440 2.3E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 TVD_06190 fbc817a127b763c3612f167eb3bd4472 520 SUPERFAMILY SSF56024 281 477 4.12E-28 T 11-10-2018 TVD_06190 fbc817a127b763c3612f167eb3bd4472 520 Gene3D G3DSA:3.30.870.10 304 472 2.7E-29 T 11-10-2018 TVD_06190 fbc817a127b763c3612f167eb3bd4472 520 SUPERFAMILY SSF56024 38 233 4.4E-38 T 11-10-2018 TVD_06190 fbc817a127b763c3612f167eb3bd4472 520 Gene3D G3DSA:3.30.870.10 58 246 4.4E-35 T 11-10-2018 TVD_06190 fbc817a127b763c3612f167eb3bd4472 520 Pfam PF13091 PLD-like domain 81 229 8.8E-14 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TVD_06190 fbc817a127b763c3612f167eb3bd4472 520 Pfam PF13091 PLD-like domain 327 463 9.3E-19 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 TVD_06690 b510907eb0a1df0f27e9816730bfb1d3 112 Gene3D G3DSA:2.40.10.220 1 112 3.7E-40 T 11-10-2018 TVD_06690 b510907eb0a1df0f27e9816730bfb1d3 112 Pfam PF07238 PilZ domain 11 98 3.6E-9 T 11-10-2018 IPR009875 PilZ domain GO:0035438 TVD_12790 6c9195d6887aafa1785005374b28116e 432 SUPERFAMILY SSF63411 18 226 6.46E-42 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TVD_12790 6c9195d6887aafa1785005374b28116e 432 Gene3D G3DSA:3.30.830.10 238 432 3.7E-49 T 11-10-2018 TVD_12790 6c9195d6887aafa1785005374b28116e 432 Pfam PF00675 Insulinase (Peptidase family M16) 33 175 4.3E-9 T 11-10-2018 IPR011765 Peptidase M16, N-terminal TVD_12790 6c9195d6887aafa1785005374b28116e 432 Pfam PF05193 Peptidase M16 inactive domain 189 363 2.6E-25 T 11-10-2018 IPR007863 Peptidase M16, C-terminal TVD_12790 6c9195d6887aafa1785005374b28116e 432 SUPERFAMILY SSF63411 251 431 1.02E-42 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TVD_12790 6c9195d6887aafa1785005374b28116e 432 Gene3D G3DSA:3.30.830.10 24 235 3.1E-47 T 11-10-2018 TVD_05150 1f5e340a7f3d51a35defdb6924c6d54a 764 Gene3D G3DSA:1.50.10.100 383 737 4.4E-119 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 TVD_05150 1f5e340a7f3d51a35defdb6924c6d54a 764 SUPERFAMILY SSF48230 421 701 5.13E-47 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 TVD_05150 1f5e340a7f3d51a35defdb6924c6d54a 764 Pfam PF05426 Alginate lyase 419 700 7.0E-70 T 11-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 TVD_01440 8c3b07de43d69dcee907c307c63275a5 150 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 37 6.7E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01440 8c3b07de43d69dcee907c307c63275a5 150 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 35 3.9E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site TVD_01440 8c3b07de43d69dcee907c307c63275a5 150 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 15 133 7.9E-23 T 11-10-2018 IPR013362 Pilus modification type IV, PilV TVD_06865 b05127a51ecc177d49dea6ab28d13b24 196 Gene3D G3DSA:1.20.1440.20 17 195 2.3E-58 T 11-10-2018 IPR023353 LemA-like domain superfamily TVD_06865 b05127a51ecc177d49dea6ab28d13b24 196 Pfam PF04011 LemA family 6 195 3.3E-66 T 11-10-2018 IPR007156 LemA TVD_06865 b05127a51ecc177d49dea6ab28d13b24 196 SUPERFAMILY SSF140478 25 183 1.31E-51 T 11-10-2018 IPR023353 LemA-like domain superfamily TVD_01265 9d47e3f8b68b9978ff20b77c7f0abb20 161 Pfam PF04361 Protein of unknown function (DUF494) 5 152 5.3E-50 T 11-10-2018 IPR007456 Smg TVD_01265 9d47e3f8b68b9978ff20b77c7f0abb20 161 Hamap MF_00598 Protein Smg [smg]. 5 161 26.957 T 11-10-2018 IPR007456 Smg TVD_05705 f7273001d12f44d183416422b06420d5 256 Pfam PF01975 Survival protein SurE 3 182 4.0E-61 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TVD_05705 f7273001d12f44d183416422b06420d5 256 Gene3D G3DSA:3.40.1210.10 1 249 9.0E-96 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TVD_05705 f7273001d12f44d183416422b06420d5 256 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 233 3.9E-70 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TVD_05705 f7273001d12f44d183416422b06420d5 256 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 250 41.195 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 TVD_05705 f7273001d12f44d183416422b06420d5 256 SUPERFAMILY SSF64167 1 248 7.46E-86 T 11-10-2018 TVD_08435 dc71ea5bca0a5e30fd6c6f8d04e71aca 378 Pfam PF07143 CrtC N-terminal lipocalin domain 64 240 9.5E-51 T 11-10-2018 IPR010791 AttH domain TVD_08435 dc71ea5bca0a5e30fd6c6f8d04e71aca 378 Gene3D G3DSA:2.40.370.10 51 243 4.6E-64 T 11-10-2018 IPR023374 AttH-like domain superfamily TVD_08435 dc71ea5bca0a5e30fd6c6f8d04e71aca 378 Pfam PF17186 Lipocalin-like domain 243 375 6.5E-37 T 11-10-2018 TVD_08435 dc71ea5bca0a5e30fd6c6f8d04e71aca 378 SUPERFAMILY SSF159245 40 375 4.97E-91 T 11-10-2018 TVD_08435 dc71ea5bca0a5e30fd6c6f8d04e71aca 378 Gene3D G3DSA:2.40.370.10 244 378 7.3E-37 T 11-10-2018 IPR023374 AttH-like domain superfamily TVD_07045 c9f44ef238908b37802448cf26671f40 165 SUPERFAMILY SSF81593 56 129 6.67E-14 T 11-10-2018 TVD_02605 9d740c9ea322c6eb0c8887c8a330ecbe 179 Pfam PF06271 RDD family 14 158 1.8E-17 T 11-10-2018 IPR010432 RDD TVD_00110 698b691a96c7ec6349d1c4c85f16b405 64 Pfam PF14255 Cysteine-rich CPXCG 10 53 1.9E-16 T 11-10-2018 IPR025990 Cysteine-rich CPXCG protein TVD_04375 96637628ad43cd489847136bb21d9d36 340 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 24 330 5.5E-97 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 TVD_04375 96637628ad43cd489847136bb21d9d36 340 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 52 332 6.3E-70 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 TVD_04375 96637628ad43cd489847136bb21d9d36 340 SUPERFAMILY SSF52540 58 186 2.94E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04375 96637628ad43cd489847136bb21d9d36 340 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 8 335 36.27 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 TVD_11445 610c83dccc7c868261a4cba04c081e5c 322 SUPERFAMILY SSF52540 11 156 2.09E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_11445 610c83dccc7c868261a4cba04c081e5c 322 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 11 306 28.547 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TVD_11445 610c83dccc7c868261a4cba04c081e5c 322 Pfam PF01715 IPP transferase 45 287 1.0E-76 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TVD_11445 610c83dccc7c868261a4cba04c081e5c 322 Gene3D G3DSA:1.10.20.140 118 189 5.0E-90 T 11-10-2018 TVD_11445 610c83dccc7c868261a4cba04c081e5c 322 Gene3D G3DSA:3.40.50.300 15 288 5.0E-90 T 11-10-2018 TVD_11445 610c83dccc7c868261a4cba04c081e5c 322 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 11 287 2.6E-87 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 TVD_04845 012f5d7c4a0856280e06b405ba356021 373 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 315 6.2E-12 T 11-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal TVD_04845 012f5d7c4a0856280e06b405ba356021 373 Pfam PF07282 Putative transposase DNA-binding domain 288 356 4.8E-25 T 11-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal TVD_04845 012f5d7c4a0856280e06b405ba356021 373 Pfam PF01385 Probable transposase 169 274 1.1E-21 T 11-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 TVD_04845 012f5d7c4a0856280e06b405ba356021 373 Pfam PF12323 Helix-turn-helix domain 1 47 3.6E-21 T 11-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain TVD_08705 364e593163248517873a6e9d5ce7944e 154 SUPERFAMILY SSF103247 29 149 3.14E-28 T 11-10-2018 IPR035923 TT1751-like domain superfamily TVD_08705 364e593163248517873a6e9d5ce7944e 154 Gene3D G3DSA:3.30.310.70 27 150 3.9E-12 T 11-10-2018 IPR035923 TT1751-like domain superfamily TVD_08705 364e593163248517873a6e9d5ce7944e 154 Pfam PF03625 Domain of unknown function DUF302 59 120 7.3E-14 T 11-10-2018 IPR005180 Domain of unknown function DUF302 TVD_08745 8eed333dbda07998ee501c07612d2df7 207 Pfam PF00156 Phosphoribosyl transferase domain 18 150 3.0E-24 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TVD_08745 8eed333dbda07998ee501c07612d2df7 207 Gene3D G3DSA:3.40.50.2020 9 183 1.1E-37 T 11-10-2018 TVD_08745 8eed333dbda07998ee501c07612d2df7 207 SUPERFAMILY SSF53271 11 160 1.97E-31 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TVD_11260 c88c70ff54c8f6167a48bfe758b9cea0 175 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 27 44 1.6E-34 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TVD_11260 c88c70ff54c8f6167a48bfe758b9cea0 175 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 89 109 1.6E-34 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TVD_11260 c88c70ff54c8f6167a48bfe758b9cea0 175 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 139 157 1.6E-34 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TVD_11260 c88c70ff54c8f6167a48bfe758b9cea0 175 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 113 135 1.6E-34 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TVD_11260 c88c70ff54c8f6167a48bfe758b9cea0 175 SUPERFAMILY SSF54611 13 158 9.59E-48 T 11-10-2018 IPR035958 SecB-like superfamily TVD_11260 c88c70ff54c8f6167a48bfe758b9cea0 175 Hamap MF_00821 Protein-export protein SecB [secB]. 1 161 32.032 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TVD_11260 c88c70ff54c8f6167a48bfe758b9cea0 175 Pfam PF02556 Preprotein translocase subunit SecB 19 160 8.9E-52 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TVD_11260 c88c70ff54c8f6167a48bfe758b9cea0 175 Gene3D G3DSA:3.10.420.10 9 175 4.8E-55 T 11-10-2018 IPR035958 SecB-like superfamily TVD_11260 c88c70ff54c8f6167a48bfe758b9cea0 175 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 22 160 5.5E-47 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TVD_03550 bf51d403792c4c619c66e3ef30f21031 208 PIRSF PIRSF005461 1 207 2.1E-75 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 TVD_03550 bf51d403792c4c619c66e3ef30f21031 208 Pfam PF01728 FtsJ-like methyltransferase 29 203 2.8E-55 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 TVD_03550 bf51d403792c4c619c66e3ef30f21031 208 Gene3D G3DSA:3.40.50.150 28 206 2.2E-57 T 11-10-2018 TVD_03550 bf51d403792c4c619c66e3ef30f21031 208 SUPERFAMILY SSF53335 28 204 7.8E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_03550 bf51d403792c4c619c66e3ef30f21031 208 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 13 206 29.484 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 TVD_09860 517e2365fa3cdff8a2d95f7ef39b192e 267 Gene3D G3DSA:3.40.50.150 8 171 3.7E-5 T 11-10-2018 TVD_09860 517e2365fa3cdff8a2d95f7ef39b192e 267 SUPERFAMILY SSF53335 19 156 1.05E-6 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_09740 d73a7ddae80089a33238169e8e9737a8 316 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 17 64 3.2E-16 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain TVD_09740 d73a7ddae80089a33238169e8e9737a8 316 Pfam PF00691 OmpA family 174 268 2.6E-14 T 11-10-2018 IPR006665 OmpA-like domain TVD_09740 d73a7ddae80089a33238169e8e9737a8 316 SUPERFAMILY SSF103088 165 275 8.24E-22 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_09740 d73a7ddae80089a33238169e8e9737a8 316 Gene3D G3DSA:3.30.1330.60 121 297 6.4E-53 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_01530 78d21de7096da7e08802444cbcf09c68 66 Gene3D G3DSA:1.20.58.660 6 60 2.0E-7 T 11-10-2018 TVD_01530 78d21de7096da7e08802444cbcf09c68 66 Pfam PF04325 Protein of unknown function (DUF465) 11 56 2.7E-14 T 11-10-2018 IPR007420 Protein of unknown function DUF465 TVD_05585 8a6dd2bb7038acf7f388afa5fb51207d 337 Pfam PF02470 MlaD protein 37 141 5.6E-11 T 11-10-2018 IPR003399 Mce/MlaD TVD_10615 c1c9f2d5bedf056db5a7409eb369a4ea 135 SUPERFAMILY SSF75169 17 135 8.58E-17 T 11-10-2018 IPR027396 DsrEFH-like TVD_10615 c1c9f2d5bedf056db5a7409eb369a4ea 135 Pfam PF02635 DsrE/DsrF-like family 16 135 2.2E-19 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_10615 c1c9f2d5bedf056db5a7409eb369a4ea 135 Gene3D G3DSA:3.40.1260.10 5 135 1.4E-30 T 11-10-2018 IPR027396 DsrEFH-like TVD_01345 ee11197fdc6013105932d34d2acd53a7 276 Pfam PF07722 Peptidase C26 124 253 1.2E-34 T 11-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 TVD_01345 ee11197fdc6013105932d34d2acd53a7 276 SUPERFAMILY SSF52317 20 273 4.59E-33 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_00455 50e27ab322c8ca50e37642a823f9c40f 411 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 41 389 7.6E-16 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 TVD_00455 50e27ab322c8ca50e37642a823f9c40f 411 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 284 303 4.4E-9 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TVD_00455 50e27ab322c8ca50e37642a823f9c40f 411 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 67 85 4.4E-9 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TVD_00455 50e27ab322c8ca50e37642a823f9c40f 411 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 87 99 4.4E-9 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 TVD_00455 50e27ab322c8ca50e37642a823f9c40f 411 TIGRFAM TIGR03099 dCO2ase_PEP1: pyridoxal-dependent decarboxylase, exosortase A system-associated 14 411 1.6E-188 T 11-10-2018 IPR017530 Pyridoxal-dependent decarboxylase, exosortase system type 1 associated TVD_00455 50e27ab322c8ca50e37642a823f9c40f 411 Gene3D G3DSA:2.40.37.10 37 411 4.9E-99 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TVD_00455 50e27ab322c8ca50e37642a823f9c40f 411 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 48 294 2.3E-38 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 TVD_00455 50e27ab322c8ca50e37642a823f9c40f 411 Gene3D G3DSA:3.20.20.10 45 296 4.9E-99 T 11-10-2018 IPR029066 PLP-binding barrel TVD_00455 50e27ab322c8ca50e37642a823f9c40f 411 SUPERFAMILY SSF51419 37 296 7.85E-67 T 11-10-2018 IPR029066 PLP-binding barrel TVD_00455 50e27ab322c8ca50e37642a823f9c40f 411 SUPERFAMILY SSF50621 276 411 8.16E-34 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 TVD_03045 7167db9b88c1b366ed9dafabce09a8e7 83 Pfam PF04226 Transglycosylase associated protein 35 82 6.7E-13 T 11-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 TVD_01570 1c96bf8f78b26fd62e3eb2e544384854 444 SUPERFAMILY SSF47384 218 281 1.18E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 TVD_01570 1c96bf8f78b26fd62e3eb2e544384854 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 2.4E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_01570 1c96bf8f78b26fd62e3eb2e544384854 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 422 2.4E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_01570 1c96bf8f78b26fd62e3eb2e544384854 444 Gene3D G3DSA:3.30.565.10 291 444 3.2E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_01570 1c96bf8f78b26fd62e3eb2e544384854 444 Gene3D G3DSA:1.10.287.130 182 281 1.5E-9 T 11-10-2018 TVD_01570 1c96bf8f78b26fd62e3eb2e544384854 444 SUPERFAMILY SSF55874 296 439 1.7E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_01570 1c96bf8f78b26fd62e3eb2e544384854 444 SMART SM00387 331 444 5.5E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_01570 1c96bf8f78b26fd62e3eb2e544384854 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 440 8.1E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_00590 67d76526f8845e462dc9cbabbc555853 239 SUPERFAMILY SSF51735 9 232 9.77E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_00590 67d76526f8845e462dc9cbabbc555853 239 Pfam PF00106 short chain dehydrogenase 9 184 4.0E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_00590 67d76526f8845e462dc9cbabbc555853 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 6.9E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_00590 67d76526f8845e462dc9cbabbc555853 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.9E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_00590 67d76526f8845e462dc9cbabbc555853 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 6.9E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_00590 67d76526f8845e462dc9cbabbc555853 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 6.9E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_00590 67d76526f8845e462dc9cbabbc555853 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 6.9E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_00590 67d76526f8845e462dc9cbabbc555853 239 Gene3D G3DSA:3.40.50.720 5 237 8.6E-41 T 11-10-2018 TVD_04180 49442141d970588dc86b4a799129ed99 271 Pfam PF13444 Acetyltransferase (GNAT) domain 36 136 1.3E-27 T 11-10-2018 TVD_04180 49442141d970588dc86b4a799129ed99 271 SUPERFAMILY SSF55729 17 226 2.1E-38 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_04180 49442141d970588dc86b4a799129ed99 271 Gene3D G3DSA:3.40.630.30 21 163 1.8E-24 T 11-10-2018 TVD_11385 e043240f0b045e64fe94e3949606139e 141 Pfam PF01475 Ferric uptake regulator family 8 128 6.2E-45 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 TVD_11385 e043240f0b045e64fe94e3949606139e 141 Gene3D G3DSA:3.30.1490.190 84 139 3.2E-20 T 11-10-2018 TVD_11385 e043240f0b045e64fe94e3949606139e 141 Gene3D G3DSA:1.10.10.10 1 81 4.9E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_11385 e043240f0b045e64fe94e3949606139e 141 SUPERFAMILY SSF46785 5 132 3.24E-42 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_03865 5062c47e4f34fd3f11bf8ce36b661066 100 Pfam PF12823 Domain of unknown function (DUF3817) 1 89 1.7E-19 T 11-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane TVD_03865 5062c47e4f34fd3f11bf8ce36b661066 100 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 4 87 3.0E-24 T 11-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane TVD_03845 6424cc928c70aeb200da6c2b81d47e5a 322 SMART SM00382 29 212 8.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_03845 6424cc928c70aeb200da6c2b81d47e5a 322 SUPERFAMILY SSF52540 4 226 1.7E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_03845 6424cc928c70aeb200da6c2b81d47e5a 322 Gene3D G3DSA:3.40.50.300 1 238 8.1E-64 T 11-10-2018 TVD_03845 6424cc928c70aeb200da6c2b81d47e5a 322 TIGRFAM TIGR01188 drrA: daunorubicin resistance ABC transporter, ATP-binding protein 13 306 1.5E-102 T 11-10-2018 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA GO:0005524|GO:0043215|GO:1900753 TVD_03845 6424cc928c70aeb200da6c2b81d47e5a 322 Pfam PF00005 ABC transporter 21 163 5.6E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_03845 6424cc928c70aeb200da6c2b81d47e5a 322 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_04695 316764221c0f8fdc6dc5872701ce9ee1 204 Gene3D G3DSA:3.40.50.300 13 204 4.1E-64 T 11-10-2018 TVD_04695 316764221c0f8fdc6dc5872701ce9ee1 204 SUPERFAMILY SSF52540 15 203 1.3E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04695 316764221c0f8fdc6dc5872701ce9ee1 204 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 35 203 2.1E-56 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 TVD_04695 316764221c0f8fdc6dc5872701ce9ee1 204 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 31 203 5.1E-68 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 TVD_04695 316764221c0f8fdc6dc5872701ce9ee1 204 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 28 4.9E-8 T 11-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 TVD_04695 316764221c0f8fdc6dc5872701ce9ee1 204 PIRSF PIRSF015617 8 204 3.8E-68 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 TVD_00510 61bf4184a411c4a6a9b435ee01329414 244 Pfam PF08241 Methyltransferase domain 57 147 4.0E-24 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 TVD_00510 61bf4184a411c4a6a9b435ee01329414 244 Gene3D G3DSA:3.40.50.150 34 226 8.3E-35 T 11-10-2018 TVD_00510 61bf4184a411c4a6a9b435ee01329414 244 SUPERFAMILY SSF53335 41 208 1.33E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_03740 3b737df4182e11781a4c1efdcbce5189 345 Pfam PF01595 Domain of unknown function DUF21 8 166 1.2E-35 T 11-10-2018 IPR002550 CNNM, transmembrane domain TVD_01320 5b51bc8276163fc6fdda7246d0c2845a 119 Pfam PF14559 Tetratricopeptide repeat 32 76 1.9E-7 T 11-10-2018 TVD_01320 5b51bc8276163fc6fdda7246d0c2845a 119 SMART SM00028 53 86 37.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_01320 5b51bc8276163fc6fdda7246d0c2845a 119 SMART SM00028 19 52 0.086 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_01320 5b51bc8276163fc6fdda7246d0c2845a 119 SUPERFAMILY SSF48452 6 84 3.21E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_01320 5b51bc8276163fc6fdda7246d0c2845a 119 Gene3D G3DSA:1.25.40.10 1 111 5.5E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_12575 01593b93653c0da38a225178c473f06d 392 Gene3D G3DSA:3.40.50.1260 165 378 1.0E-154 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12575 01593b93653c0da38a225178c473f06d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 7.8E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12575 01593b93653c0da38a225178c473f06d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 7.8E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12575 01593b93653c0da38a225178c473f06d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 7.8E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12575 01593b93653c0da38a225178c473f06d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 7.8E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12575 01593b93653c0da38a225178c473f06d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 7.8E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12575 01593b93653c0da38a225178c473f06d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 7.8E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12575 01593b93653c0da38a225178c473f06d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 7.8E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12575 01593b93653c0da38a225178c473f06d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 7.8E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12575 01593b93653c0da38a225178c473f06d 392 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 7.8E-83 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12575 01593b93653c0da38a225178c473f06d 392 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 388 40.347 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12575 01593b93653c0da38a225178c473f06d 392 Gene3D G3DSA:3.40.50.1260 8 386 1.0E-154 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12575 01593b93653c0da38a225178c473f06d 392 SUPERFAMILY SSF53748 3 388 8.83E-150 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12575 01593b93653c0da38a225178c473f06d 392 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12575 01593b93653c0da38a225178c473f06d 392 PIRSF PIRSF000724 1 392 3.0E-140 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_12575 01593b93653c0da38a225178c473f06d 392 Pfam PF00162 Phosphoglycerate kinase 6 378 4.9E-146 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 TVD_04095 ba5869a3a379fb4a6719d2f35aca799e 306 Pfam PF02535 ZIP Zinc transporter 163 302 2.1E-22 T 11-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 TVD_13320 39011812e7325a9647f76f7c608a41c0 84 SUPERFAMILY SSF159127 1 76 6.15E-21 T 11-10-2018 IPR037254 HupF/HypC superfamily TVD_13320 39011812e7325a9647f76f7c608a41c0 84 Gene3D G3DSA:2.40.50.970 1 77 5.7E-26 T 11-10-2018 IPR037254 HupF/HypC superfamily TVD_13320 39011812e7325a9647f76f7c608a41c0 84 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 11-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site TVD_13320 39011812e7325a9647f76f7c608a41c0 84 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 73 2.6E-19 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC TVD_13320 39011812e7325a9647f76f7c608a41c0 84 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 61 73 1.7E-16 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC TVD_13320 39011812e7325a9647f76f7c608a41c0 84 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.7E-16 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC TVD_13320 39011812e7325a9647f76f7c608a41c0 84 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 43 59 1.7E-16 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC TVD_13320 39011812e7325a9647f76f7c608a41c0 84 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 22 38 1.7E-16 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC TVD_13320 39011812e7325a9647f76f7c608a41c0 84 Pfam PF01455 HupF/HypC family 1 70 6.5E-24 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC TVD_04360 59b476ce8119e1676f2bd4f42c5a397f 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 134 3.5E-30 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 TVD_04360 59b476ce8119e1676f2bd4f42c5a397f 142 Gene3D G3DSA:3.30.420.270 61 132 8.9E-8 T 11-10-2018 TVD_04925 74b44abb7b3b22c6b82a31f555c3e602 390 Gene3D G3DSA:1.10.260.40 61 160 2.4E-16 T 11-10-2018 TVD_04925 74b44abb7b3b22c6b82a31f555c3e602 390 Pfam PF13413 Helix-turn-helix domain 70 128 7.5E-15 T 11-10-2018 TVD_04925 74b44abb7b3b22c6b82a31f555c3e602 390 Pfam PF13464 Domain of unknown function (DUF4115) 314 388 2.0E-17 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 TVD_06030 3e8d225ae89b89051e2602c5240450d8 282 Pfam PF13248 zinc-ribbon domain 110 134 1.5E-6 T 11-10-2018 TVD_00020 a84deb317d80396d2591438a4edafe19 248 Gene3D G3DSA:3.40.50.720 7 248 1.8E-73 T 11-10-2018 TVD_00020 a84deb317d80396d2591438a4edafe19 248 Pfam PF00899 ThiF family 19 244 7.8E-34 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 TVD_00020 a84deb317d80396d2591438a4edafe19 248 SUPERFAMILY SSF69572 15 244 2.88E-50 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 TVD_07665 100b1d15a701e346f9db4851462012a6 113 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 100 1.1E-23 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 TVD_07665 100b1d15a701e346f9db4851462012a6 113 Pfam PF01740 STAS domain 4 96 1.1E-14 T 11-10-2018 IPR002645 STAS domain TVD_07665 100b1d15a701e346f9db4851462012a6 113 SUPERFAMILY SSF52091 1 106 1.08E-25 T 11-10-2018 IPR036513 STAS domain superfamily TVD_07665 100b1d15a701e346f9db4851462012a6 113 Gene3D G3DSA:3.30.750.24 1 110 3.8E-29 T 11-10-2018 IPR036513 STAS domain superfamily TVD_07165 415e440cba20e319beeccd3b6f82e10a 558 SUPERFAMILY SSF81606 331 540 1.57E-7 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_07165 415e440cba20e319beeccd3b6f82e10a 558 Gene3D G3DSA:3.60.40.10 283 543 5.3E-56 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_07165 415e440cba20e319beeccd3b6f82e10a 558 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 344 542 2.6E-25 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_07165 415e440cba20e319beeccd3b6f82e10a 558 SMART SM00331 318 543 4.2E-15 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 TVD_00050 23a982c44c6a675eb131cf02e12c70cf 612 Pfam PF02080 TrkA-C domain 329 396 5.5E-12 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TVD_00050 23a982c44c6a675eb131cf02e12c70cf 612 Pfam PF02080 TrkA-C domain 240 305 4.5E-8 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TVD_00050 23a982c44c6a675eb131cf02e12c70cf 612 Pfam PF03600 Citrate transporter 22 560 2.4E-51 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 TVD_00050 23a982c44c6a675eb131cf02e12c70cf 612 SUPERFAMILY SSF116726 323 403 9.94E-18 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_00050 23a982c44c6a675eb131cf02e12c70cf 612 Gene3D G3DSA:3.30.70.1450 327 400 3.8E-17 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_00050 23a982c44c6a675eb131cf02e12c70cf 612 Gene3D G3DSA:3.30.70.1450 236 310 5.9E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_00050 23a982c44c6a675eb131cf02e12c70cf 612 SUPERFAMILY SSF116726 228 305 1.96E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 TVD_10990 04b3fa7a9f5b7dfd911e7dc2079f852b 250 Gene3D G3DSA:3.60.15.10 1 238 3.6E-75 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_10990 04b3fa7a9f5b7dfd911e7dc2079f852b 250 Pfam PF00753 Metallo-beta-lactamase superfamily 12 175 1.7E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_10990 04b3fa7a9f5b7dfd911e7dc2079f852b 250 SUPERFAMILY SSF56281 3 229 1.49E-54 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_10990 04b3fa7a9f5b7dfd911e7dc2079f852b 250 SMART SM00849 12 175 1.4E-28 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_02550 357c207fc0593697683fa265410847e1 345 Gene3D G3DSA:3.40.50.300 1 139 1.2E-41 T 11-10-2018 TVD_02550 357c207fc0593697683fa265410847e1 345 Gene3D G3DSA:1.20.272.10 213 337 6.6E-21 T 11-10-2018 TVD_02550 357c207fc0593697683fa265410847e1 345 SUPERFAMILY SSF48019 210 330 8.33E-15 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 TVD_02550 357c207fc0593697683fa265410847e1 345 SUPERFAMILY SSF52540 3 190 1.25E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_02550 357c207fc0593697683fa265410847e1 345 Gene3D G3DSA:1.10.8.60 143 210 5.4E-20 T 11-10-2018 TVD_02550 357c207fc0593697683fa265410847e1 345 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 328 1.5E-69 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 TVD_02550 357c207fc0593697683fa265410847e1 345 Pfam PF06144 DNA polymerase III, delta subunit 20 189 5.0E-23 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 TVD_10475 908ecedb2100a5e39a4fdd7ce221db52 268 Gene3D G3DSA:1.25.40.10 142 267 2.2E-34 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_10475 908ecedb2100a5e39a4fdd7ce221db52 268 SUPERFAMILY SSF81901 114 230 2.22E-30 T 11-10-2018 TVD_10475 908ecedb2100a5e39a4fdd7ce221db52 268 SMART SM00671 59 94 2.3E-5 T 11-10-2018 IPR006597 Sel1-like repeat TVD_10475 908ecedb2100a5e39a4fdd7ce221db52 268 SMART SM00671 200 235 0.0022 T 11-10-2018 IPR006597 Sel1-like repeat TVD_10475 908ecedb2100a5e39a4fdd7ce221db52 268 SMART SM00671 95 130 2.1E-7 T 11-10-2018 IPR006597 Sel1-like repeat TVD_10475 908ecedb2100a5e39a4fdd7ce221db52 268 SMART SM00671 164 199 6.1E-11 T 11-10-2018 IPR006597 Sel1-like repeat TVD_10475 908ecedb2100a5e39a4fdd7ce221db52 268 SMART SM00671 131 163 4.8E-4 T 11-10-2018 IPR006597 Sel1-like repeat TVD_10475 908ecedb2100a5e39a4fdd7ce221db52 268 SUPERFAMILY SSF81901 54 145 4.84E-21 T 11-10-2018 TVD_10475 908ecedb2100a5e39a4fdd7ce221db52 268 Gene3D G3DSA:1.25.40.10 17 139 8.7E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_10475 908ecedb2100a5e39a4fdd7ce221db52 268 Pfam PF08238 Sel1 repeat 60 94 4.6E-7 T 11-10-2018 IPR006597 Sel1-like repeat TVD_10475 908ecedb2100a5e39a4fdd7ce221db52 268 Pfam PF08238 Sel1 repeat 95 130 1.9E-7 T 11-10-2018 IPR006597 Sel1-like repeat TVD_10475 908ecedb2100a5e39a4fdd7ce221db52 268 Pfam PF08238 Sel1 repeat 164 199 2.9E-9 T 11-10-2018 IPR006597 Sel1-like repeat TVD_10475 908ecedb2100a5e39a4fdd7ce221db52 268 Pfam PF08238 Sel1 repeat 131 162 3.5E-5 T 11-10-2018 IPR006597 Sel1-like repeat TVD_10475 908ecedb2100a5e39a4fdd7ce221db52 268 Pfam PF08238 Sel1 repeat 201 230 2.5E-5 T 11-10-2018 IPR006597 Sel1-like repeat TVD_00610 c1ce43e3058df26268829e43151294ea 399 SUPERFAMILY SSF58104 95 361 8.11E-40 T 11-10-2018 TVD_00610 c1ce43e3058df26268829e43151294ea 399 Gene3D G3DSA:1.10.287.950 81 384 1.2E-40 T 11-10-2018 TVD_00610 c1ce43e3058df26268829e43151294ea 399 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 183 321 1.2E-26 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_00610 c1ce43e3058df26268829e43151294ea 399 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 203 230 9.4E-19 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_00610 c1ce43e3058df26268829e43151294ea 399 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 18 38 9.4E-19 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_00610 c1ce43e3058df26268829e43151294ea 399 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 281 310 9.4E-19 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_00610 c1ce43e3058df26268829e43151294ea 399 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 232 261 9.4E-19 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 TVD_00610 c1ce43e3058df26268829e43151294ea 399 SMART SM00283 99 372 1.1E-4 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 TVD_05510 6b7cd338e63fa0128e21f22c1331195b 213 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 201 1.0E-44 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 TVD_05510 6b7cd338e63fa0128e21f22c1331195b 213 Gene3D G3DSA:3.20.20.70 2 208 1.1E-65 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_05510 6b7cd338e63fa0128e21f22c1331195b 213 SUPERFAMILY SSF51366 3 203 7.22E-59 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 TVD_05510 6b7cd338e63fa0128e21f22c1331195b 213 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 205 39.591 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 TVD_03635 0e10b2ba71b2e9eca31c66c7e483b5d2 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 20.302 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 TVD_03635 0e10b2ba71b2e9eca31c66c7e483b5d2 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 2.0E-24 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like TVD_06430 86490637a45afc7ceeca960b58d2305a 225 Pfam PF10972 Peptidoglycan-binding protein, CsiV 26 221 2.7E-17 T 11-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV TVD_03035 f9fe7cc6415dd7fc2d0bf9988034afd8 421 SUPERFAMILY SSF56935 29 421 5.92E-90 T 11-10-2018 TVD_03035 f9fe7cc6415dd7fc2d0bf9988034afd8 421 Gene3D G3DSA:2.40.160.60 29 421 1.0E-130 T 11-10-2018 TVD_03035 f9fe7cc6415dd7fc2d0bf9988034afd8 421 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 22 421 1.4E-104 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) TVD_00460 71af48f9e8707f9b0fb3640a8e6f2f55 322 SUPERFAMILY SSF55729 105 276 3.44E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_00460 71af48f9e8707f9b0fb3640a8e6f2f55 322 Pfam PF13480 Acetyltransferase (GNAT) domain 115 260 9.0E-23 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 TVD_03055 bf90df552ea1d5cd476faee2b84ffc33 364 Gene3D G3DSA:3.40.50.2000 178 328 2.2E-17 T 11-10-2018 TVD_03055 bf90df552ea1d5cd476faee2b84ffc33 364 SUPERFAMILY SSF53756 38 323 5.76E-24 T 11-10-2018 TVD_03055 bf90df552ea1d5cd476faee2b84ffc33 364 Pfam PF12038 Domain of unknown function (DUF3524) 7 173 2.2E-58 T 11-10-2018 IPR022701 Glycosyltransferase family 1, N-terminal TVD_03055 bf90df552ea1d5cd476faee2b84ffc33 364 Pfam PF00534 Glycosyl transferases group 1 186 325 1.5E-8 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 TVD_13800 832ca40fb173aa5de46aa074a912731d 313 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 256 272 2.5E-68 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_13800 832ca40fb173aa5de46aa074a912731d 313 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 143 163 2.5E-68 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_13800 832ca40fb173aa5de46aa074a912731d 313 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 166 181 2.5E-68 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_13800 832ca40fb173aa5de46aa074a912731d 313 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 65 80 2.5E-68 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_13800 832ca40fb173aa5de46aa074a912731d 313 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 86 106 2.5E-68 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_13800 832ca40fb173aa5de46aa074a912731d 313 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 117 141 2.5E-68 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_13800 832ca40fb173aa5de46aa074a912731d 313 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 11 296 60.843 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_13800 832ca40fb173aa5de46aa074a912731d 313 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 12 302 3.8E-159 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_13800 832ca40fb173aa5de46aa074a912731d 313 Gene3D G3DSA:3.30.930.10 2 219 8.1E-111 T 11-10-2018 TVD_13800 832ca40fb173aa5de46aa074a912731d 313 Gene3D G3DSA:1.20.58.180 220 300 8.1E-33 T 11-10-2018 TVD_13800 832ca40fb173aa5de46aa074a912731d 313 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 13 295 1.5E-149 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 TVD_13800 832ca40fb173aa5de46aa074a912731d 313 SUPERFAMILY SSF55681 12 295 1.34E-131 T 11-10-2018 TVD_00115 6151142ff913a8323f3d0c62954b2ac6 422 SMART SM00729 28 245 3.0E-55 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TVD_00115 6151142ff913a8323f3d0c62954b2ac6 422 Gene3D G3DSA:3.80.30.20 9 315 2.2E-99 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TVD_00115 6151142ff913a8323f3d0c62954b2ac6 422 SUPERFAMILY SSF102114 22 399 1.57E-108 T 11-10-2018 TVD_00115 6151142ff913a8323f3d0c62954b2ac6 422 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 30 390 7.2E-115 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 TVD_00115 6151142ff913a8323f3d0c62954b2ac6 422 Pfam PF06969 HemN C-terminal domain 327 388 1.2E-13 T 11-10-2018 IPR010723 HemN, C-terminal TVD_00115 6151142ff913a8323f3d0c62954b2ac6 422 Pfam PF04055 Radical SAM superfamily 33 194 9.0E-21 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TVD_06665 c7d7398c5292a174eedba340e4d25bf1 183 SUPERFAMILY SSF53271 14 181 4.2E-40 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TVD_06665 c7d7398c5292a174eedba340e4d25bf1 183 Gene3D G3DSA:3.40.50.2020 1 183 3.1E-47 T 11-10-2018 TVD_06665 c7d7398c5292a174eedba340e4d25bf1 183 Pfam PF00156 Phosphoribosyl transferase domain 16 149 2.0E-21 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TVD_08405 3ecf5be8932c6213e0dbdf2a0e3457e3 398 SUPERFAMILY SSF53383 6 384 3.16E-134 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_08405 3ecf5be8932c6213e0dbdf2a0e3457e3 398 Gene3D G3DSA:3.40.640.10 48 293 1.9E-146 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_08405 3ecf5be8932c6213e0dbdf2a0e3457e3 398 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 211 248 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TVD_08405 3ecf5be8932c6213e0dbdf2a0e3457e3 398 Gene3D G3DSA:3.90.1150.10 13 376 1.9E-146 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_08405 3ecf5be8932c6213e0dbdf2a0e3457e3 398 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 7 383 4.4E-144 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 TVD_08405 3ecf5be8932c6213e0dbdf2a0e3457e3 398 PIRSF PIRSF000521 163 387 7.0E-34 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TVD_08405 3ecf5be8932c6213e0dbdf2a0e3457e3 398 PIRSF PIRSF000521 1 147 7.4E-14 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TVD_08405 3ecf5be8932c6213e0dbdf2a0e3457e3 398 Pfam PF00202 Aminotransferase class-III 8 382 1.0E-112 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TVD_08405 3ecf5be8932c6213e0dbdf2a0e3457e3 398 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 4 387 70.941 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 TVD_05220 6dfff65db9baf162317d44aa9a39ef08 183 Pfam PF02397 Bacterial sugar transferase 3 172 1.0E-48 T 11-10-2018 IPR003362 Bacterial sugar transferase TVD_05570 7cd990dfde929f0d27e034e36a6d7003 312 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 168 7.5E-62 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 TVD_05570 7cd990dfde929f0d27e034e36a6d7003 312 PIRSF PIRSF002849 1 312 4.8E-115 T 11-10-2018 TVD_05570 7cd990dfde929f0d27e034e36a6d7003 312 Gene3D G3DSA:3.40.50.300 1 199 2.0E-48 T 11-10-2018 TVD_05570 7cd990dfde929f0d27e034e36a6d7003 312 Gene3D G3DSA:1.10.8.300 206 309 3.2E-21 T 11-10-2018 TVD_05570 7cd990dfde929f0d27e034e36a6d7003 312 SMART SM00382 35 176 1.4E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_05570 7cd990dfde929f0d27e034e36a6d7003 312 SUPERFAMILY SSF52540 5 289 1.66E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_05375 21e31f7fca4f0a57c1dc9d0d5701a0d4 582 Pfam PF03065 Glycosyl hydrolase family 57 22 488 5.4E-68 T 11-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 TVD_05375 21e31f7fca4f0a57c1dc9d0d5701a0d4 582 SUPERFAMILY SSF88713 18 475 6.67E-79 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TVD_05375 21e31f7fca4f0a57c1dc9d0d5701a0d4 582 Gene3D G3DSA:3.20.110.20 173 505 2.9E-18 T 11-10-2018 TVD_12185 d1fbe3d96b38c8153497f2feae095bb2 432 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 47 208 2.5E-59 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 TVD_12185 d1fbe3d96b38c8153497f2feae095bb2 432 SUPERFAMILY SSF53756 51 397 5.83E-14 T 11-10-2018 TVD_12185 d1fbe3d96b38c8153497f2feae095bb2 432 Gene3D G3DSA:3.40.50.11720 40 206 4.7E-48 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 TVD_12185 d1fbe3d96b38c8153497f2feae095bb2 432 Gene3D G3DSA:3.40.50.2000 213 399 7.1E-57 T 11-10-2018 TVD_06860 7679cf6878844ff56d61e493d467612b 655 Gene3D G3DSA:3.30.2010.10 103 194 4.2E-32 T 11-10-2018 TVD_06860 7679cf6878844ff56d61e493d467612b 655 Pfam PF01435 Peptidase family M48 113 322 6.1E-31 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TVD_06390 ef857d26cb17348b338aca146a987479 145 Pfam PF10975 Protein of unknown function (DUF2802) 67 132 1.4E-18 T 11-10-2018 IPR021244 Protein of unknown function DUF2802 TVD_04850 72065ec5187d85b58b3fe104396ef19f 442 Pfam PF11902 Protein of unknown function (DUF3422) 10 432 1.6E-152 T 11-10-2018 IPR021830 Protein of unknown function DUF3422 TVD_07685 265ca50c892ab94af3e08d97c8780331 88 Gene3D G3DSA:3.30.1490.100 3 74 1.0E-11 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TVD_07685 265ca50c892ab94af3e08d97c8780331 88 SUPERFAMILY SSF100879 4 67 4.91E-14 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TVD_07685 265ca50c892ab94af3e08d97c8780331 88 Pfam PF11799 impB/mucB/samB family C-terminal domain 7 68 7.5E-9 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 TVD_07780 5bcfb488c2cc37bc187af97fe9163df1 175 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 30 163 3.4E-31 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 TVD_12220 bd900653e068bd78bbfac27abd6e244d 444 Pfam PF04932 O-Antigen ligase 202 349 2.0E-17 T 11-10-2018 IPR007016 O-antigen ligase-related TVD_03835 4f1d4e28a26d703d42b0e669e3a59faf 346 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 150 323 8.9E-35 T 11-10-2018 IPR000160 GGDEF domain TVD_03835 4f1d4e28a26d703d42b0e669e3a59faf 346 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 320 1.1E-30 T 11-10-2018 IPR000160 GGDEF domain TVD_03835 4f1d4e28a26d703d42b0e669e3a59faf 346 Gene3D G3DSA:3.30.70.270 149 333 2.1E-48 T 11-10-2018 TVD_03835 4f1d4e28a26d703d42b0e669e3a59faf 346 SMART SM00267 140 324 3.4E-36 T 11-10-2018 IPR000160 GGDEF domain TVD_03835 4f1d4e28a26d703d42b0e669e3a59faf 346 SUPERFAMILY SSF55073 156 325 2.67E-37 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_07875 98bd8af52512b16f490cc32cb914c40b 405 PRINTS PR01010 Flagellar P-ring protein signature 97 112 2.5E-89 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TVD_07875 98bd8af52512b16f490cc32cb914c40b 405 PRINTS PR01010 Flagellar P-ring protein signature 122 141 2.5E-89 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TVD_07875 98bd8af52512b16f490cc32cb914c40b 405 PRINTS PR01010 Flagellar P-ring protein signature 77 92 2.5E-89 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TVD_07875 98bd8af52512b16f490cc32cb914c40b 405 PRINTS PR01010 Flagellar P-ring protein signature 144 161 2.5E-89 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TVD_07875 98bd8af52512b16f490cc32cb914c40b 405 PRINTS PR01010 Flagellar P-ring protein signature 62 77 2.5E-89 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TVD_07875 98bd8af52512b16f490cc32cb914c40b 405 PRINTS PR01010 Flagellar P-ring protein signature 202 220 2.5E-89 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TVD_07875 98bd8af52512b16f490cc32cb914c40b 405 PRINTS PR01010 Flagellar P-ring protein signature 292 304 2.5E-89 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TVD_07875 98bd8af52512b16f490cc32cb914c40b 405 PRINTS PR01010 Flagellar P-ring protein signature 228 246 2.5E-89 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TVD_07875 98bd8af52512b16f490cc32cb914c40b 405 PRINTS PR01010 Flagellar P-ring protein signature 161 179 2.5E-89 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TVD_07875 98bd8af52512b16f490cc32cb914c40b 405 Hamap MF_00416 Flagellar P-ring protein [flgI]. 26 405 40.231 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TVD_07875 98bd8af52512b16f490cc32cb914c40b 405 Pfam PF02119 Flagellar P-ring protein 62 404 2.1E-145 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TVD_02355 e070772548f473221ff7f6e1cf62c629 103 SUPERFAMILY SSF54999 5 101 5.89E-36 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily TVD_02355 e070772548f473221ff7f6e1cf62c629 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.2E-44 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02355 e070772548f473221ff7f6e1cf62c629 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.937 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02355 e070772548f473221ff7f6e1cf62c629 103 Gene3D G3DSA:3.30.70.600 1 103 1.4E-36 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily TVD_02355 e070772548f473221ff7f6e1cf62c629 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.3E-34 T 11-10-2018 IPR027486 Ribosomal protein S10 domain TVD_02355 e070772548f473221ff7f6e1cf62c629 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02355 e070772548f473221ff7f6e1cf62c629 103 SMART SM01403 7 101 1.8E-54 T 11-10-2018 IPR027486 Ribosomal protein S10 domain TVD_02355 e070772548f473221ff7f6e1cf62c629 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.1E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02355 e070772548f473221ff7f6e1cf62c629 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.1E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_02355 e070772548f473221ff7f6e1cf62c629 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.1E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_06110 baac40057b6dacd72a634abf2acadcf2 1094 ProDom PD144061 ECS5259 GENOME STY4851 YJIT 9 485 8.0E-69 T 11-10-2018 TVD_04460 de282ad03afd0155aaf70b8427f60479 222 Gene3D G3DSA:2.30.30.40 19 88 9.3E-11 T 11-10-2018 TVD_04460 de282ad03afd0155aaf70b8427f60479 222 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 26 221 4.0E-58 T 11-10-2018 IPR016476 SH3 domain protein TVD_04460 de282ad03afd0155aaf70b8427f60479 222 SMART SM00287 22 87 3.3E-6 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type TVD_04460 de282ad03afd0155aaf70b8427f60479 222 Pfam PF08239 Bacterial SH3 domain 34 83 1.3E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type TVD_10380 b03bcbb9f7fc06530f5e270deec3f639 249 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 3 245 17.574 T 11-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 TVD_10380 b03bcbb9f7fc06530f5e270deec3f639 249 Gene3D G3DSA:1.20.5.110 28 106 4.1E-7 T 11-10-2018 TVD_10380 b03bcbb9f7fc06530f5e270deec3f639 249 Pfam PF16331 TolA binding protein trimerisation 34 105 5.3E-18 T 11-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 TVD_10380 b03bcbb9f7fc06530f5e270deec3f639 249 Gene3D G3DSA:1.25.40.10 125 248 4.5E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_10380 b03bcbb9f7fc06530f5e270deec3f639 249 Pfam PF13174 Tetratricopeptide repeat 200 230 2.4E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 TVD_10380 b03bcbb9f7fc06530f5e270deec3f639 249 Pfam PF13525 Outer membrane lipoprotein 121 196 2.1E-10 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like TVD_10380 b03bcbb9f7fc06530f5e270deec3f639 249 SUPERFAMILY SSF48452 123 226 1.74E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_10380 b03bcbb9f7fc06530f5e270deec3f639 249 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 124 242 9.1E-30 T 11-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal TVD_04605 28435ae96c06a134445bc53459163bec 192 PIRSF PIRSF006102 1 192 2.4E-60 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TVD_04605 28435ae96c06a134445bc53459163bec 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 2 190 2.0E-87 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 TVD_04605 28435ae96c06a134445bc53459163bec 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 189 1.7E-60 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 TVD_04605 28435ae96c06a134445bc53459163bec 192 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 1 190 26.047 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 TVD_07830 c80d24548c5227838c2b00034ccf2f70 170 SUPERFAMILY SSF53254 4 125 6.44E-20 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TVD_07830 c80d24548c5227838c2b00034ccf2f70 170 Gene3D G3DSA:3.40.50.1240 5 144 2.1E-28 T 11-10-2018 IPR029033 Histidine phosphatase superfamily TVD_07830 c80d24548c5227838c2b00034ccf2f70 170 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 81 9.7E-11 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TVD_07830 c80d24548c5227838c2b00034ccf2f70 170 SMART SM00855 5 118 1.1E-10 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 TVD_00315 8e9f582805b03b2ad10bb712076f95ec 511 Pfam PF10082 Putative beta-barrel porin 2 41 149 5.2E-7 T 11-10-2018 IPR018759 Putative beta-barrel porin 2 TVD_00315 8e9f582805b03b2ad10bb712076f95ec 511 TIGRFAM TIGR03016 pepcterm_hypo_1: uncharacterized protein, PEP-CTERM system associated 39 511 2.7E-91 T 11-10-2018 IPR017467 Conserved hypothetical protein CHP03016, PEP-CTERM TVD_11480 06dfa427eb048b1a2b6e7ae2cfbad324 263 Gene3D G3DSA:2.40.30.10 2 96 1.3E-27 T 11-10-2018 TVD_11480 06dfa427eb048b1a2b6e7ae2cfbad324 263 Gene3D G3DSA:3.40.50.80 97 256 1.6E-36 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_11480 06dfa427eb048b1a2b6e7ae2cfbad324 263 Pfam PF00175 Oxidoreductase NAD-binding domain 111 228 3.7E-9 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TVD_11480 06dfa427eb048b1a2b6e7ae2cfbad324 263 SUPERFAMILY SSF52343 102 253 7.73E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain TVD_11480 06dfa427eb048b1a2b6e7ae2cfbad324 263 Pfam PF00970 Oxidoreductase FAD-binding domain 16 91 2.4E-7 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 TVD_11480 06dfa427eb048b1a2b6e7ae2cfbad324 263 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 50 57 2.2E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TVD_11480 06dfa427eb048b1a2b6e7ae2cfbad324 263 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 110 129 2.2E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TVD_11480 06dfa427eb048b1a2b6e7ae2cfbad324 263 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 147 158 2.2E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TVD_11480 06dfa427eb048b1a2b6e7ae2cfbad324 263 SUPERFAMILY SSF63380 3 98 2.87E-21 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel TVD_10735 2b93bd098f30253d3e901d91933a7d36 469 Gene3D G3DSA:1.10.287.1120 163 433 1.3E-61 T 11-10-2018 TVD_10735 2b93bd098f30253d3e901d91933a7d36 469 SUPERFAMILY SSF116734 215 441 1.54E-38 T 11-10-2018 TVD_10735 2b93bd098f30253d3e901d91933a7d36 469 Gene3D G3DSA:3.90.220.20 235 386 1.3E-61 T 11-10-2018 TVD_10735 2b93bd098f30253d3e901d91933a7d36 469 Gene3D G3DSA:3.90.220.20 18 437 1.3E-61 T 11-10-2018 TVD_10735 2b93bd098f30253d3e901d91933a7d36 469 SUPERFAMILY SSF116734 6 216 1.62E-34 T 11-10-2018 TVD_04445 e81ea666b6ef913e2f9cda8a8ed5c0d5 170 SUPERFAMILY SSF54637 3 168 7.16E-60 T 11-10-2018 IPR029069 HotDog domain superfamily TVD_04445 e81ea666b6ef913e2f9cda8a8ed5c0d5 170 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 2 170 1.0E-92 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TVD_04445 e81ea666b6ef913e2f9cda8a8ed5c0d5 170 Pfam PF07977 FabA-like domain 27 156 2.6E-51 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TVD_04445 e81ea666b6ef913e2f9cda8a8ed5c0d5 170 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 170 50.382 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 TVD_04445 e81ea666b6ef913e2f9cda8a8ed5c0d5 170 Gene3D G3DSA:3.10.129.10 1 170 1.2E-67 T 11-10-2018 TVD_00070 e0626524ea5e7af13cb4eb123d3b154c 68 SUPERFAMILY SSF54285 1 68 8.87E-17 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp TVD_00070 e0626524ea5e7af13cb4eb123d3b154c 68 Pfam PF02597 ThiS family 3 68 1.1E-15 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 TVD_00070 e0626524ea5e7af13cb4eb123d3b154c 68 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 68 3.4E-20 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis TVD_00070 e0626524ea5e7af13cb4eb123d3b154c 68 Gene3D G3DSA:3.10.20.30 1 68 3.3E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily TVD_03510 5511d5ac98f6d1d870b26933abf8d6d0 168 SUPERFAMILY SSF143744 27 160 7.72E-30 T 11-10-2018 IPR038084 GlcG-like domain superfamily TVD_03510 5511d5ac98f6d1d870b26933abf8d6d0 168 Gene3D G3DSA:3.30.450.150 35 161 2.2E-32 T 11-10-2018 IPR038084 GlcG-like domain superfamily TVD_03510 5511d5ac98f6d1d870b26933abf8d6d0 168 Pfam PF03928 Haem-degrading 34 157 1.9E-23 T 11-10-2018 IPR005624 Haem-degrading TVD_08640 c5d002c77322eae1a3db1c2759f3a81d 181 Gene3D G3DSA:1.20.120.520 2 174 7.6E-45 T 11-10-2018 TVD_08640 c5d002c77322eae1a3db1c2759f3a81d 181 Pfam PF01814 Hemerythrin HHE cation binding domain 15 153 5.9E-17 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 TVD_08950 a3bd973bd64c00b86cdd471bc07f9a19 345 SUPERFAMILY SSF56112 31 303 2.55E-26 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily TVD_08950 a3bd973bd64c00b86cdd471bc07f9a19 345 Pfam PF01636 Phosphotransferase enzyme family 37 265 1.9E-12 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase TVD_08950 a3bd973bd64c00b86cdd471bc07f9a19 345 SMART SM00587 112 269 8.2E-5 T 11-10-2018 IPR015897 CHK kinase-like TVD_08950 a3bd973bd64c00b86cdd471bc07f9a19 345 Gene3D G3DSA:3.90.1200.10 118 302 3.6E-8 T 11-10-2018 TVD_03325 1cf6ecd16f995a5f3ed74592dd291154 556 Pfam PF02690 Na+/Pi-cotransporter 22 162 1.5E-41 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TVD_03325 1cf6ecd16f995a5f3ed74592dd291154 556 Pfam PF02690 Na+/Pi-cotransporter 188 269 4.8E-10 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TVD_09790 53c36d70f5456d8493d74cfb1b8d8bcb 355 Pfam PF03824 High-affinity nickel-transport protein 243 341 2.3E-13 T 11-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 TVD_09790 53c36d70f5456d8493d74cfb1b8d8bcb 355 Pfam PF03824 High-affinity nickel-transport protein 104 228 1.3E-26 T 11-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 TVD_01110 f8ca555555ca6502993cde3f5b9a10bb 465 Pfam PF12899 Alkaline and neutral invertase 16 451 1.7E-196 T 11-10-2018 IPR024746 Glycosyl hydrolase family 100 GO:0033926 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 TVD_01110 f8ca555555ca6502993cde3f5b9a10bb 465 SUPERFAMILY SSF48208 47 442 1.12E-39 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 TVD_11990 a411bc449247eae18defb4e9253de8fb 313 Gene3D G3DSA:1.20.1530.20 166 311 2.0E-8 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily TVD_11990 a411bc449247eae18defb4e9253de8fb 313 Pfam PF03547 Membrane transport protein 164 304 1.2E-14 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 TVD_11990 a411bc449247eae18defb4e9253de8fb 313 Pfam PF03547 Membrane transport protein 5 147 3.1E-8 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 TVD_02640 5d2fcef9fc6472d10bbfa5ef3fe5a743 301 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 9 301 55.532 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD TVD_02640 5d2fcef9fc6472d10bbfa5ef3fe5a743 301 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 93 7.6E-19 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TVD_02640 5d2fcef9fc6472d10bbfa5ef3fe5a743 301 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 13 300 7.1E-114 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 TVD_02640 5d2fcef9fc6472d10bbfa5ef3fe5a743 301 Gene3D G3DSA:1.10.443.10 114 295 5.8E-68 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 TVD_02640 5d2fcef9fc6472d10bbfa5ef3fe5a743 301 Gene3D G3DSA:1.10.150.130 8 101 1.8E-19 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal TVD_02640 5d2fcef9fc6472d10bbfa5ef3fe5a743 301 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 7 301 57.469 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 TVD_02640 5d2fcef9fc6472d10bbfa5ef3fe5a743 301 SUPERFAMILY SSF56349 10 289 1.47E-56 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TVD_02640 5d2fcef9fc6472d10bbfa5ef3fe5a743 301 Pfam PF00589 Phage integrase family 116 286 2.8E-49 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TVD_06955 e8772468f3bc5b5bbba4370e9b855782 124 Pfam PF09350 Domain of unknown function (DUF1992) 8 73 1.7E-22 T 11-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain TVD_06275 17aaf546262cf46fc924622046a9c8bd 361 Pfam PF02120 Flagellar hook-length control protein FliK 240 321 6.4E-21 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal TVD_06275 17aaf546262cf46fc924622046a9c8bd 361 Gene3D G3DSA:3.30.750.140 221 331 9.5E-29 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily TVD_06275 17aaf546262cf46fc924622046a9c8bd 361 PRINTS PR01007 Flagellar hook-length control protein signature 32 49 1.1E-10 T 11-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 TVD_06275 17aaf546262cf46fc924622046a9c8bd 361 PRINTS PR01007 Flagellar hook-length control protein signature 287 310 1.1E-10 T 11-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 TVD_06275 17aaf546262cf46fc924622046a9c8bd 361 PRINTS PR01007 Flagellar hook-length control protein signature 254 272 1.1E-10 T 11-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 TVD_06770 46a76a5f99d6592ee5c8527b3c49b3c3 209 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 205 33.98 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD TVD_06770 46a76a5f99d6592ee5c8527b3c49b3c3 209 SUPERFAMILY SSF101322 6 207 9.29E-66 T 11-10-2018 IPR035932 HflD-like superfamily TVD_06770 46a76a5f99d6592ee5c8527b3c49b3c3 209 Gene3D G3DSA:1.10.3890.10 2 209 7.0E-77 T 11-10-2018 IPR035932 HflD-like superfamily TVD_06770 46a76a5f99d6592ee5c8527b3c49b3c3 209 Pfam PF04356 Protein of unknown function (DUF489) 7 197 2.3E-73 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD TVD_06770 46a76a5f99d6592ee5c8527b3c49b3c3 209 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 10 196 6.0E-33 T 11-10-2018 TVD_07355 b4427e223fe36feee19989c2e90d8846 462 PIRSF PIRSF000167 4 462 1.5E-164 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 TVD_07355 b4427e223fe36feee19989c2e90d8846 462 Gene3D G3DSA:3.80.30.20 2 369 1.1E-120 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe TVD_07355 b4427e223fe36feee19989c2e90d8846 462 Pfam PF04055 Radical SAM superfamily 60 233 1.0E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 TVD_07355 b4427e223fe36feee19989c2e90d8846 462 SUPERFAMILY SSF102114 5 450 9.22E-134 T 11-10-2018 TVD_07355 b4427e223fe36feee19989c2e90d8846 462 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 7 462 4.7E-176 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 TVD_07355 b4427e223fe36feee19989c2e90d8846 462 Gene3D G3DSA:1.10.10.920 370 462 2.0E-31 T 11-10-2018 TVD_07355 b4427e223fe36feee19989c2e90d8846 462 SMART SM00729 55 278 3.8E-51 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 TVD_07355 b4427e223fe36feee19989c2e90d8846 462 Pfam PF06969 HemN C-terminal domain 369 437 9.4E-9 T 11-10-2018 IPR010723 HemN, C-terminal TVD_11520 9a605abf67d0f063ece12661356c79c1 90 Pfam PF00550 Phosphopantetheine attachment site 10 83 4.8E-10 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain TVD_11520 9a605abf67d0f063ece12661356c79c1 90 Gene3D G3DSA:1.10.1200.10 6 89 6.3E-19 T 11-10-2018 IPR036736 ACP-like superfamily TVD_11520 9a605abf67d0f063ece12661356c79c1 90 SUPERFAMILY SSF47336 3 87 7.72E-13 T 11-10-2018 IPR036736 ACP-like superfamily TVD_08895 f84901b6a4ef6f99001ebbc96b766126 291 Gene3D G3DSA:2.60.120.650 2 240 2.6E-45 T 11-10-2018 TVD_08895 f84901b6a4ef6f99001ebbc96b766126 291 Pfam PF13621 Cupin-like domain 16 224 8.6E-30 T 11-10-2018 TVD_08895 f84901b6a4ef6f99001ebbc96b766126 291 SUPERFAMILY SSF51197 5 273 1.65E-49 T 11-10-2018 TVD_03495 39f4e804912a32ca3832b717d1edd5c4 154 Pfam PF01878 EVE domain 2 148 3.3E-57 T 11-10-2018 IPR002740 EVE domain TVD_03495 39f4e804912a32ca3832b717d1edd5c4 154 SUPERFAMILY SSF88697 1 151 3.65E-63 T 11-10-2018 IPR015947 PUA-like superfamily TVD_03495 39f4e804912a32ca3832b717d1edd5c4 154 Gene3D G3DSA:3.10.590.10 1 154 3.7E-66 T 11-10-2018 TVD_03300 1307121210d0d9f8824e1fe72f32a8ff 228 SUPERFAMILY SSF53098 43 215 4.81E-35 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_03300 1307121210d0d9f8824e1fe72f32a8ff 228 Pfam PF00665 Integrase core domain 41 175 9.0E-31 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TVD_03300 1307121210d0d9f8824e1fe72f32a8ff 228 Gene3D G3DSA:3.30.420.10 65 207 3.4E-25 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TVD_00605 42a8dd577850320e99ebd434d15646ea 101 Gene3D G3DSA:3.30.750.24 1 101 1.2E-17 T 11-10-2018 IPR036513 STAS domain superfamily TVD_00605 42a8dd577850320e99ebd434d15646ea 101 Pfam PF13466 STAS domain 16 94 2.8E-15 T 11-10-2018 IPR002645 STAS domain TVD_00605 42a8dd577850320e99ebd434d15646ea 101 SUPERFAMILY SSF52091 10 100 1.96E-18 T 11-10-2018 IPR036513 STAS domain superfamily TVD_04165 f66202fe301a15f01c11c9009dba02f4 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TVD_04165 f66202fe301a15f01c11c9009dba02f4 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 260 19.793 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TVD_04165 f66202fe301a15f01c11c9009dba02f4 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 259 4.9E-74 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TVD_04165 f66202fe301a15f01c11c9009dba02f4 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 255 8.6E-80 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 TVD_00250 534eb3cf2717c52970be31a80b9a227d 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 663 676 5.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_00250 534eb3cf2717c52970be31a80b9a227d 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 657 5.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_00250 534eb3cf2717c52970be31a80b9a227d 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 622 5.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_00250 534eb3cf2717c52970be31a80b9a227d 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 5.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 TVD_00250 534eb3cf2717c52970be31a80b9a227d 680 TIGRFAM TIGR02916 PEP_his_kin: putative PEP-CTERM system histidine kinase 7 676 8.8E-221 T 11-10-2018 IPR014265 Signal transduction histidine kinase, PEP-CTERM system, putative TVD_00250 534eb3cf2717c52970be31a80b9a227d 680 SMART SM00387 571 679 1.9E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_00250 534eb3cf2717c52970be31a80b9a227d 680 Gene3D G3DSA:3.30.450.40 299 465 2.6E-8 T 11-10-2018 IPR029016 GAF-like domain superfamily TVD_00250 534eb3cf2717c52970be31a80b9a227d 680 SUPERFAMILY SSF55874 537 676 3.8E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_00250 534eb3cf2717c52970be31a80b9a227d 680 Gene3D G3DSA:3.30.565.10 532 676 5.7E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_00250 534eb3cf2717c52970be31a80b9a227d 680 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 572 677 1.9E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase TVD_00250 534eb3cf2717c52970be31a80b9a227d 680 SUPERFAMILY SSF55781 319 463 4.14E-13 T 11-10-2018 TVD_00250 534eb3cf2717c52970be31a80b9a227d 680 Gene3D G3DSA:1.10.287.130 473 531 5.7E-37 T 11-10-2018 TVD_13585 382eda53d02036f3d039c62489c6764d 458 Gene3D G3DSA:3.40.50.300 73 341 1.3E-112 T 11-10-2018 TVD_13585 382eda53d02036f3d039c62489c6764d 458 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 457 1.2E-254 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 TVD_13585 382eda53d02036f3d039c62489c6764d 458 Gene3D G3DSA:2.40.10.170 1 72 2.5E-26 T 11-10-2018 TVD_13585 382eda53d02036f3d039c62489c6764d 458 SUPERFAMILY SSF47917 342 457 3.92E-54 T 11-10-2018 TVD_13585 382eda53d02036f3d039c62489c6764d 458 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 330 339 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_13585 382eda53d02036f3d039c62489c6764d 458 Gene3D G3DSA:1.10.1140.10 342 458 8.6E-60 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_13585 382eda53d02036f3d039c62489c6764d 458 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 70 7.7E-20 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_13585 382eda53d02036f3d039c62489c6764d 458 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 457 56.71 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 TVD_13585 382eda53d02036f3d039c62489c6764d 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 127 339 2.7E-65 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_13585 382eda53d02036f3d039c62489c6764d 458 SUPERFAMILY SSF52540 74 344 1.22E-91 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_13585 382eda53d02036f3d039c62489c6764d 458 SMART SM00382 139 324 0.0026 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_13585 382eda53d02036f3d039c62489c6764d 458 SUPERFAMILY SSF50615 2 72 2.46E-23 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 TVD_13555 8e1cf9e3066ab727373aa0eecf4fce26 289 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 43 283 1.2E-39 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13555 8e1cf9e3066ab727373aa0eecf4fce26 289 SUPERFAMILY SSF81336 103 282 1.31E-36 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13555 8e1cf9e3066ab727373aa0eecf4fce26 289 Hamap MF_01393 ATP synthase subunit a [atpB]. 10 288 15.096 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13555 8e1cf9e3066ab727373aa0eecf4fce26 289 ProSitePatterns PS00449 ATP synthase a subunit signature. 218 227 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13555 8e1cf9e3066ab727373aa0eecf4fce26 289 Gene3D G3DSA:1.20.120.220 102 289 3.3E-50 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13555 8e1cf9e3066ab727373aa0eecf4fce26 289 Pfam PF00119 ATP synthase A chain 53 281 1.2E-52 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_07575 a34e51765535be50b555cc0822daf73b 172 Pfam PF03625 Domain of unknown function DUF302 77 135 1.3E-10 T 11-10-2018 IPR005180 Domain of unknown function DUF302 TVD_07575 a34e51765535be50b555cc0822daf73b 172 SUPERFAMILY SSF103247 43 166 1.83E-23 T 11-10-2018 IPR035923 TT1751-like domain superfamily TVD_07575 a34e51765535be50b555cc0822daf73b 172 Gene3D G3DSA:3.30.310.70 41 168 2.0E-13 T 11-10-2018 IPR035923 TT1751-like domain superfamily TVD_13225 15e092a60059ab59bd5f03e402cf6278 450 Pfam PF02417 Chromate transporter 260 443 1.5E-34 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 TVD_13225 15e092a60059ab59bd5f03e402cf6278 450 Pfam PF02417 Chromate transporter 20 183 3.2E-36 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 TVD_13225 15e092a60059ab59bd5f03e402cf6278 450 TIGRFAM TIGR00937 2A51: chromate efflux transporter 25 443 5.7E-69 T 11-10-2018 IPR014047 Chromate transporter, long chain TVD_13225 15e092a60059ab59bd5f03e402cf6278 450 PIRSF PIRSF004810 1 450 3.8E-127 T 11-10-2018 IPR014047 Chromate transporter, long chain TVD_00925 53b7f39e01b0c9b06c32c12a0de7d742 194 Pfam PF03843 Outer membrane lipoprotein Slp family 23 171 1.2E-45 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 TVD_00925 53b7f39e01b0c9b06c32c12a0de7d742 194 PIRSF PIRSF004982 8 192 6.4E-50 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 TVD_08190 4c57e817d90f75f6047ecec8db4dd0e6 357 SUPERFAMILY SSF116734 2 111 3.76E-24 T 11-10-2018 TVD_08190 4c57e817d90f75f6047ecec8db4dd0e6 357 SUPERFAMILY SSF116734 110 330 2.78E-45 T 11-10-2018 TVD_08190 4c57e817d90f75f6047ecec8db4dd0e6 357 Gene3D G3DSA:3.90.220.20 114 324 1.2E-31 T 11-10-2018 TVD_08190 4c57e817d90f75f6047ecec8db4dd0e6 357 Gene3D G3DSA:3.90.220.20 1 107 5.1E-21 T 11-10-2018 TVD_08190 4c57e817d90f75f6047ecec8db4dd0e6 357 Pfam PF01420 Type I restriction modification DNA specificity domain 141 299 3.2E-17 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TVD_08190 4c57e817d90f75f6047ecec8db4dd0e6 357 Pfam PF01420 Type I restriction modification DNA specificity domain 11 76 2.2E-5 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 TVD_04710 dde36398cfd4b2c6201ae537babb094b 369 Pfam PF01888 CbiD 12 271 6.7E-85 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TVD_04710 dde36398cfd4b2c6201ae537babb094b 369 Gene3D G3DSA:3.30.2110.10 14 186 5.4E-45 T 11-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TVD_04710 dde36398cfd4b2c6201ae537babb094b 369 SUPERFAMILY SSF111342 7 288 5.49E-77 T 11-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TVD_04710 dde36398cfd4b2c6201ae537babb094b 369 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 12 361 26.604 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TVD_04710 dde36398cfd4b2c6201ae537babb094b 369 PIRSF PIRSF026782 8 365 2.0E-110 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TVD_04710 dde36398cfd4b2c6201ae537babb094b 369 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 20 322 1.2E-56 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 TVD_03810 8046ee57125be5e8133a367ce7c38185 77 Gene3D G3DSA:3.30.70.100 5 71 2.1E-9 T 11-10-2018 TVD_03810 8046ee57125be5e8133a367ce7c38185 77 SUPERFAMILY SSF55008 2 75 2.36E-8 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 TVD_04785 69b9328384809bdf9c35bc71990f80f8 149 Pfam PF14347 Domain of unknown function (DUF4399) 57 149 3.8E-36 T 11-10-2018 IPR025512 Domain of unknown function DUF4399 TVD_13050 e8396148ceeb51526e4dc6d45d7e0857 210 Pfam PF01323 DSBA-like thioredoxin domain 96 201 1.2E-17 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 TVD_13050 e8396148ceeb51526e4dc6d45d7e0857 210 ProSitePatterns PS00194 Thioredoxin family active site. 51 69 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TVD_13050 e8396148ceeb51526e4dc6d45d7e0857 210 SUPERFAMILY SSF52833 28 205 3.71E-40 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_13050 e8396148ceeb51526e4dc6d45d7e0857 210 PIRSF PIRSF001488 3 210 5.5E-40 T 11-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL TVD_13050 e8396148ceeb51526e4dc6d45d7e0857 210 Gene3D G3DSA:3.40.30.10 18 210 9.7E-55 T 11-10-2018 TVD_12080 48e6e2fa99586191a3d21e2a0080e930 318 SUPERFAMILY SSF53271 72 307 9.88E-62 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TVD_12080 48e6e2fa99586191a3d21e2a0080e930 318 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 316 6.7E-29 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TVD_12080 48e6e2fa99586191a3d21e2a0080e930 318 Gene3D G3DSA:3.40.50.2020 10 305 4.6E-127 T 11-10-2018 TVD_12080 48e6e2fa99586191a3d21e2a0080e930 318 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 7 317 48.355 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 TVD_12080 48e6e2fa99586191a3d21e2a0080e930 318 Gene3D G3DSA:3.40.50.2020 151 293 4.6E-127 T 11-10-2018 TVD_12080 48e6e2fa99586191a3d21e2a0080e930 318 SMART SM01400 7 124 7.0E-77 T 11-10-2018 TVD_12080 48e6e2fa99586191a3d21e2a0080e930 318 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 7 124 5.4E-48 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TVD_12080 48e6e2fa99586191a3d21e2a0080e930 318 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 316 2.9E-116 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 TVD_00010 209e8f5355200b5de1fff00e0205b36e 251 SMART SM00563 74 188 4.4E-31 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TVD_00010 209e8f5355200b5de1fff00e0205b36e 251 Pfam PF01553 Acyltransferase 61 185 1.2E-19 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 TVD_00010 209e8f5355200b5de1fff00e0205b36e 251 SUPERFAMILY SSF69593 22 236 2.88E-37 T 11-10-2018 TVD_00295 58b4f6222bdced1c8804e118ab2e462b 238 Gene3D G3DSA:3.40.630.30 8 197 1.0E-37 T 11-10-2018 TVD_00295 58b4f6222bdced1c8804e118ab2e462b 238 SUPERFAMILY SSF55729 6 178 7.07E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_00295 58b4f6222bdced1c8804e118ab2e462b 238 Pfam PF13444 Acetyltransferase (GNAT) domain 24 113 1.5E-14 T 11-10-2018 TVD_08215 c972e1ba3a6c70f4e16c761d08aa5290 343 Pfam PF13280 WYL domain 160 333 3.8E-34 T 11-10-2018 IPR026881 WYL domain TVD_02145 3c79d444af80023ba589975263632b22 94 Pfam PF04999 Cell division protein FtsL 5 87 6.3E-24 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 TVD_02145 3c79d444af80023ba589975263632b22 94 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 5 87 4.9E-23 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 TVD_02145 3c79d444af80023ba589975263632b22 94 Hamap MF_00910 Cell division protein FtsL [ftsL]. 4 87 16.639 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 TVD_03665 9599b3ac4c65bbe8e8cffd5df0512e00 151 SUPERFAMILY SSF74942 84 148 5.36E-15 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily TVD_03665 9599b3ac4c65bbe8e8cffd5df0512e00 151 Pfam PF02576 RimP N-terminal domain 11 83 2.4E-22 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal TVD_03665 9599b3ac4c65bbe8e8cffd5df0512e00 151 Gene3D G3DSA:3.30.300.70 1 80 1.4E-20 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily TVD_03665 9599b3ac4c65bbe8e8cffd5df0512e00 151 Pfam PF17384 RimP C-terminal SH3 domain 86 148 8.9E-15 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal TVD_03665 9599b3ac4c65bbe8e8cffd5df0512e00 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 22.992 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 TVD_03665 9599b3ac4c65bbe8e8cffd5df0512e00 151 SUPERFAMILY SSF75420 4 83 2.48E-22 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily TVD_00170 aaeef58c864c9d7a70476a32e1918817 726 Pfam PF05170 AsmA family 1 606 4.9E-66 T 11-10-2018 IPR007844 AsmA TVD_00795 5161e663bf7ad4f9ea2fa87e033ffa2e 164 SUPERFAMILY SSF50630 23 154 1.08E-36 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily TVD_00795 5161e663bf7ad4f9ea2fa87e033ffa2e 164 Pfam PF05618 Putative ATP-dependant zinc protease 23 155 1.5E-35 T 11-10-2018 TVD_00795 5161e663bf7ad4f9ea2fa87e033ffa2e 164 Gene3D G3DSA:2.40.70.10 20 148 2.6E-35 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily TVD_03340 388b85f663450f4a530303c9f4773766 514 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 503 4.0E-161 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 TVD_03340 388b85f663450f4a530303c9f4773766 514 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 503 5.1E-192 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 TVD_03340 388b85f663450f4a530303c9f4773766 514 ProSitePatterns PS01303 BCCT family of transporters signature. 317 326 - T 11-10-2018 IPR018093 BCCT transporter, conserved site TVD_00825 1a3299cc9b74dd2801930b1c63046d4d 157 Gene3D G3DSA:1.10.3680.10 4 143 8.3E-14 T 11-10-2018 IPR029024 TerB-like TVD_00825 1a3299cc9b74dd2801930b1c63046d4d 157 SUPERFAMILY SSF158682 23 154 2.22E-19 T 11-10-2018 IPR029024 TerB-like TVD_00825 1a3299cc9b74dd2801930b1c63046d4d 157 Pfam PF05099 Tellurite resistance protein TerB 13 146 2.4E-23 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal TVD_13570 68683cb41a03be6c5fe028eadaed2dd7 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 2.5E-23 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13570 68683cb41a03be6c5fe028eadaed2dd7 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 2.5E-23 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13570 68683cb41a03be6c5fe028eadaed2dd7 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 2.5E-23 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13570 68683cb41a03be6c5fe028eadaed2dd7 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 2.5E-23 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13570 68683cb41a03be6c5fe028eadaed2dd7 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 2.5E-23 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13570 68683cb41a03be6c5fe028eadaed2dd7 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 176 1.9E-44 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13570 68683cb41a03be6c5fe028eadaed2dd7 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 2.5E-49 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13570 68683cb41a03be6c5fe028eadaed2dd7 178 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13570 68683cb41a03be6c5fe028eadaed2dd7 178 SUPERFAMILY SSF47928 3 105 1.57E-23 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13570 68683cb41a03be6c5fe028eadaed2dd7 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 18.525 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_13570 68683cb41a03be6c5fe028eadaed2dd7 178 Gene3D G3DSA:1.10.520.20 2 107 3.4E-29 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 TVD_11375 6edd30ba2e01bab3e51b773816489624 146 Gene3D G3DSA:3.10.290.10 10 114 2.2E-36 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 TVD_11375 6edd30ba2e01bab3e51b773816489624 146 SMART SM00363 15 76 1.8E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_11375 6edd30ba2e01bab3e51b773816489624 146 SUPERFAMILY SSF55174 15 108 2.75E-27 T 11-10-2018 TVD_11375 6edd30ba2e01bab3e51b773816489624 146 Pfam PF01479 S4 domain 16 60 2.5E-12 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 TVD_11375 6edd30ba2e01bab3e51b773816489624 146 PIRSF PIRSF016821 12 140 4.0E-41 T 11-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 TVD_06260 43c298cc54ebd78aae571bb5fe40054a 240 SUPERFAMILY SSF160527 122 209 3.14E-6 T 11-10-2018 TVD_06260 43c298cc54ebd78aae571bb5fe40054a 240 Pfam PF02108 Flagellar assembly protein FliH 82 204 2.5E-26 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE TVD_06375 e3c4200d2c9dfd8c1eee9adb3f15b048 236 Pfam PF01584 CheW-like domain 99 226 1.6E-6 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_06375 e3c4200d2c9dfd8c1eee9adb3f15b048 236 SMART SM00260 90 227 0.001 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 TVD_06375 e3c4200d2c9dfd8c1eee9adb3f15b048 236 SUPERFAMILY SSF50341 95 228 3.27E-9 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 TVD_03950 fbf968f43dc86748b8a0e61c0325c1f6 187 Pfam PF13673 Acetyltransferase (GNAT) domain 55 144 1.1E-10 T 11-10-2018 IPR000182 GNAT domain TVD_03950 fbf968f43dc86748b8a0e61c0325c1f6 187 SUPERFAMILY SSF55729 1 153 7.2E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_03950 fbf968f43dc86748b8a0e61c0325c1f6 187 Gene3D G3DSA:3.40.630.30 2 151 1.1E-21 T 11-10-2018 TVD_11530 ea1d565caa4cbe0c26ecb8f0d6869e25 449 Gene3D G3DSA:3.30.300.30 343 446 1.7E-11 T 11-10-2018 TVD_11530 ea1d565caa4cbe0c26ecb8f0d6869e25 449 Pfam PF00501 AMP-binding enzyme 124 294 3.4E-18 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TVD_11530 ea1d565caa4cbe0c26ecb8f0d6869e25 449 Gene3D G3DSA:3.40.50.12780 8 325 1.4E-25 T 11-10-2018 TVD_11530 ea1d565caa4cbe0c26ecb8f0d6869e25 449 SUPERFAMILY SSF56801 19 444 1.83E-49 T 11-10-2018 TVD_12970 7419141c576586aa226bc2c0855f5612 290 Gene3D G3DSA:3.40.50.1820 43 288 2.7E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_12970 7419141c576586aa226bc2c0855f5612 290 Pfam PF01738 Dienelactone hydrolase family 67 287 5.1E-11 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 TVD_12970 7419141c576586aa226bc2c0855f5612 290 SUPERFAMILY SSF53474 31 289 7.5E-27 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_03270 3e24195504f4d746c6f7a683d29dea4f 201 Pfam PF09347 Domain of unknown function (DUF1989) 2 167 3.9E-48 T 11-10-2018 IPR018959 Protein of unknown function DUF1989 TVD_10175 fc988c029cca8f3dfad45eb9e9f73c89 152 Gene3D G3DSA:3.40.1260.10 32 152 2.2E-10 T 11-10-2018 IPR027396 DsrEFH-like TVD_10175 fc988c029cca8f3dfad45eb9e9f73c89 152 Pfam PF02635 DsrE/DsrF-like family 62 150 2.2E-7 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_10175 fc988c029cca8f3dfad45eb9e9f73c89 152 SUPERFAMILY SSF75169 34 151 7.36E-14 T 11-10-2018 IPR027396 DsrEFH-like TVD_11120 822577e8dfdc8d1d97f3ad407cc7ab55 69 Pfam PF11146 Protein of unknown function (DUF2905) 5 67 1.1E-26 T 11-10-2018 IPR021320 Protein of unknown function DUF2905 TVD_12400 53c02605836401245a53766928b8a0bb 224 SUPERFAMILY SSF53448 1 220 2.25E-52 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_12400 53c02605836401245a53766928b8a0bb 224 Gene3D G3DSA:3.90.550.10 1 222 5.3E-57 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_12400 53c02605836401245a53766928b8a0bb 224 Pfam PF00483 Nucleotidyl transferase 3 135 8.2E-20 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 TVD_11650 71c35d573dc85c0c7498d9ea20dc94f1 292 Gene3D G3DSA:3.40.50.10330 24 288 4.4E-88 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 TVD_11650 71c35d573dc85c0c7498d9ea20dc94f1 292 SUPERFAMILY SSF111331 7 290 2.75E-80 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily TVD_11650 71c35d573dc85c0c7498d9ea20dc94f1 292 Gene3D G3DSA:2.60.200.30 128 265 4.4E-88 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TVD_11650 71c35d573dc85c0c7498d9ea20dc94f1 292 Pfam PF01513 ATP-NAD kinase 59 272 5.2E-58 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TVD_11650 71c35d573dc85c0c7498d9ea20dc94f1 292 Hamap MF_00361 NAD kinase [nadK]. 6 288 32.756 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 TVD_08380 fc3b9bc86fcb74f4fa76c9d13c2851f9 145 Gene3D G3DSA:3.40.30.10 44 142 9.0E-15 T 11-10-2018 TVD_08380 fc3b9bc86fcb74f4fa76c9d13c2851f9 145 SUPERFAMILY SSF52833 49 131 3.58E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_08380 fc3b9bc86fcb74f4fa76c9d13c2851f9 145 Pfam PF13417 Glutathione S-transferase, N-terminal domain 51 128 3.4E-13 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TVD_05025 f411cc41d5e2a79398e1e83a33f50892 660 Pfam PF07793 Protein of unknown function (DUF1631) 309 655 4.5E-17 T 11-10-2018 IPR012434 Protein of unknown function DUF1631 TVD_05155 a8e883d5df1ebfd8a70b21e962a1e03f 227 Gene3D G3DSA:3.30.70.1290 1 158 1.8E-36 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TVD_05155 a8e883d5df1ebfd8a70b21e962a1e03f 227 SUPERFAMILY SSF143422 3 125 9.55E-29 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TVD_05155 a8e883d5df1ebfd8a70b21e962a1e03f 227 Pfam PF01797 Transposase IS200 like 8 120 4.3E-15 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 TVD_05155 a8e883d5df1ebfd8a70b21e962a1e03f 227 SMART SM01321 6 122 5.4E-41 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 TVD_11425 bc703549853485c213cb18a7843fe0da 253 Gene3D G3DSA:3.40.50.150 8 199 7.2E-9 T 11-10-2018 TVD_11425 bc703549853485c213cb18a7843fe0da 253 SUPERFAMILY SSF53335 20 202 6.33E-12 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_08575 96b48cbb03efbee052cef8d035f7eacd 280 SUPERFAMILY SSF81324 17 228 4.32E-28 T 11-10-2018 TVD_08575 96b48cbb03efbee052cef8d035f7eacd 280 Gene3D G3DSA:1.10.287.70 119 222 1.4E-35 T 11-10-2018 TVD_08575 96b48cbb03efbee052cef8d035f7eacd 280 Gene3D G3DSA:1.20.120.350 8 118 5.4E-25 T 11-10-2018 IPR027359 Voltage-dependent channel domain superfamily TVD_08575 96b48cbb03efbee052cef8d035f7eacd 280 Pfam PF00520 Ion transport protein 20 231 1.0E-40 T 11-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 TVD_08850 15b1a91b6b7149a5b95a7489583c221e 153 Pfam PF05433 Glycine zipper 2TM domain 31 71 4.5E-6 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 TVD_08850 15b1a91b6b7149a5b95a7489583c221e 153 PIRSF PIRSF002721 3 153 9.1E-42 T 11-10-2018 IPR016364 Surface antigen, Rickettsia type TVD_09665 74c913b91bcd3b509a669ce58c6e077a 98 Gene3D G3DSA:3.30.70.1060 1 98 1.2E-35 T 11-10-2018 TVD_09665 74c913b91bcd3b509a669ce58c6e077a 98 SUPERFAMILY SSF54909 1 98 2.86E-31 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel TVD_09665 74c913b91bcd3b509a669ce58c6e077a 98 Pfam PF03795 YCII-related domain 1 95 2.2E-26 T 11-10-2018 IPR005545 YCII-related TVD_09505 867dc714fee2dc3260a1e919ee410ea3 224 Pfam PF01965 DJ-1/PfpI family 27 217 5.4E-19 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 TVD_09505 867dc714fee2dc3260a1e919ee410ea3 224 SUPERFAMILY SSF52317 1 220 3.25E-69 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_09505 867dc714fee2dc3260a1e919ee410ea3 224 Gene3D G3DSA:3.40.50.880 1 223 2.0E-80 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like TVD_07380 5d2595f4f986f7f8074e91a9e11103de 132 SUPERFAMILY SSF46458 5 132 3.91E-22 T 11-10-2018 IPR009050 Globin-like superfamily TVD_07380 5d2595f4f986f7f8074e91a9e11103de 132 Gene3D G3DSA:1.10.490.10 2 132 4.6E-28 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TVD_07270 4c0e0e12201324174d43d011cf2b5bd1 185 Gene3D G3DSA:3.30.1360.40 31 105 1.7E-66 T 11-10-2018 TVD_07270 4c0e0e12201324174d43d011cf2b5bd1 185 Pfam PF01765 Ribosome recycling factor 20 183 1.6E-62 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 TVD_07270 4c0e0e12201324174d43d011cf2b5bd1 185 SUPERFAMILY SSF55194 4 184 1.22E-70 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 TVD_07270 4c0e0e12201324174d43d011cf2b5bd1 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.273 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 TVD_07270 4c0e0e12201324174d43d011cf2b5bd1 185 Gene3D G3DSA:1.10.132.20 12 182 1.7E-66 T 11-10-2018 TVD_07270 4c0e0e12201324174d43d011cf2b5bd1 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.8E-72 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 TVD_11815 91b1f3c9d5c7bd047740f7a13811cc09 100 TIGRFAM TIGR04535 ferrit_encaps: ferritin-like protein 6 94 3.7E-38 T 11-10-2018 IPR030907 Ferritin-like protein TVD_11815 91b1f3c9d5c7bd047740f7a13811cc09 100 SUPERFAMILY SSF47240 5 86 4.87E-23 T 11-10-2018 IPR009078 Ferritin-like superfamily TVD_08980 b043cc95a61d55a5aeeed2056f9a10c4 409 SUPERFAMILY SSF141868 148 396 1.26E-79 T 11-10-2018 IPR035919 EAL domain superfamily TVD_08980 b043cc95a61d55a5aeeed2056f9a10c4 409 SMART SM00052 141 389 3.3E-92 T 11-10-2018 IPR001633 EAL domain TVD_08980 b043cc95a61d55a5aeeed2056f9a10c4 409 Gene3D G3DSA:3.20.20.450 142 398 4.7E-88 T 11-10-2018 IPR035919 EAL domain superfamily TVD_08980 b043cc95a61d55a5aeeed2056f9a10c4 409 Pfam PF00563 EAL domain 148 384 1.3E-68 T 11-10-2018 IPR001633 EAL domain TVD_13715 8ace76c19666dd34118dcca6e7c4a6b9 233 Pfam PF02416 mttA/Hcf106 family 4 35 6.2E-8 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 TVD_13715 8ace76c19666dd34118dcca6e7c4a6b9 233 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.8E-18 T 11-10-2018 TVD_13715 8ace76c19666dd34118dcca6e7c4a6b9 233 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.8E-18 T 11-10-2018 TVD_13715 8ace76c19666dd34118dcca6e7c4a6b9 233 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.8E-18 T 11-10-2018 TVD_13715 8ace76c19666dd34118dcca6e7c4a6b9 233 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 65 3.4E-22 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 TVD_13715 8ace76c19666dd34118dcca6e7c4a6b9 233 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 205 17.127 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 TVD_01735 9221930ebf690262ac83bde8f42fb64e 390 Gene3D G3DSA:3.60.10.10 121 358 6.1E-26 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TVD_01735 9221930ebf690262ac83bde8f42fb64e 390 SUPERFAMILY SSF56219 122 351 9.03E-32 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TVD_01735 9221930ebf690262ac83bde8f42fb64e 390 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 132 343 3.3E-18 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TVD_08985 571625d4a153f711ee70bc3f474f1d82 231 Pfam PF13852 Protein of unknown function (DUF4197) 36 230 1.2E-65 T 11-10-2018 IPR025245 Protein of unknown function DUF4197 TVD_04145 4e7903adcf91ed53aff1d975413a82ab 277 SMART SM00382 44 213 5.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_04145 4e7903adcf91ed53aff1d975413a82ab 277 Pfam PF00005 ABC transporter 35 163 1.3E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_04145 4e7903adcf91ed53aff1d975413a82ab 277 SUPERFAMILY SSF52540 12 230 9.77E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_04145 4e7903adcf91ed53aff1d975413a82ab 277 Gene3D G3DSA:3.40.50.300 11 244 6.3E-55 T 11-10-2018 TVD_04145 4e7903adcf91ed53aff1d975413a82ab 277 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_10460 e9c1ecdb98a0c559616b8d6c232b8e6d 138 SUPERFAMILY SSF75620 7 108 5.49E-11 T 11-10-2018 TVD_10460 e9c1ecdb98a0c559616b8d6c232b8e6d 138 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TVD_10460 e9c1ecdb98a0c559616b8d6c232b8e6d 138 Gene3D G3DSA:3.30.160.20 1 137 6.0E-39 T 11-10-2018 TVD_10460 e9c1ecdb98a0c559616b8d6c232b8e6d 138 Pfam PF00472 RF-1 domain 7 132 4.6E-23 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TVD_09550 77b80c5dbda3a82ec970ae38e74acc86 1223 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 12 191 2.8E-56 T 11-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 TVD_09550 77b80c5dbda3a82ec970ae38e74acc86 1223 Pfam PF02538 Hydantoinase B/oxoprolinase 703 1220 1.2E-197 T 11-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 TVD_09550 77b80c5dbda3a82ec970ae38e74acc86 1223 Pfam PF01968 Hydantoinase/oxoprolinase 210 497 2.9E-108 T 11-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 TVD_03605 b8320eb5362a2c26f3b1433f2b780b68 176 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 28 174 4.5E-52 T 11-10-2018 TVD_03605 b8320eb5362a2c26f3b1433f2b780b68 176 Gene3D G3DSA:1.10.10.1590 18 90 7.5E-24 T 11-10-2018 TVD_03605 b8320eb5362a2c26f3b1433f2b780b68 176 Gene3D G3DSA:3.40.30.10 91 173 2.4E-28 T 11-10-2018 TVD_03605 b8320eb5362a2c26f3b1433f2b780b68 176 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 27 174 1.2E-58 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03605 b8320eb5362a2c26f3b1433f2b780b68 176 PIRSF PIRSF000216 3 176 6.6E-60 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03605 b8320eb5362a2c26f3b1433f2b780b68 176 SUPERFAMILY SSF52833 21 175 4.03E-52 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_00990 462b25ce37848ec8e5cd4517696b03e9 278 SUPERFAMILY SSF55486 50 257 1.39E-32 T 11-10-2018 TVD_00990 462b25ce37848ec8e5cd4517696b03e9 278 Gene3D G3DSA:1.10.472.150 31 153 8.4E-38 T 11-10-2018 TVD_00990 462b25ce37848ec8e5cd4517696b03e9 278 Gene3D G3DSA:3.40.390.10 154 273 1.3E-31 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 TVD_00990 462b25ce37848ec8e5cd4517696b03e9 278 Pfam PF06167 Glucose-regulated metallo-peptidase M90 28 255 6.4E-69 T 11-10-2018 IPR010384 MtfA family TVD_13350 815bb0e01a86acd7db1bd8178df979fd 170 SUPERFAMILY SSF55729 2 154 1.24E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_13350 815bb0e01a86acd7db1bd8178df979fd 170 Gene3D G3DSA:3.40.630.30 3 162 1.3E-21 T 11-10-2018 TVD_13350 815bb0e01a86acd7db1bd8178df979fd 170 Pfam PF13673 Acetyltransferase (GNAT) domain 59 145 4.3E-10 T 11-10-2018 IPR000182 GNAT domain TVD_13375 f57d4dfe37caa49f6da04908cc96ff18 141 Gene3D G3DSA:3.40.1260.10 25 141 4.5E-30 T 11-10-2018 IPR027396 DsrEFH-like TVD_13375 f57d4dfe37caa49f6da04908cc96ff18 141 Pfam PF02635 DsrE/DsrF-like family 36 141 7.8E-8 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_13375 f57d4dfe37caa49f6da04908cc96ff18 141 SUPERFAMILY SSF75169 28 141 4.3E-26 T 11-10-2018 IPR027396 DsrEFH-like TVD_07595 704c66e6b27a8564f64f07247fb4ca79 70 Gene3D G3DSA:1.10.1470.10 1 65 3.1E-26 T 11-10-2018 IPR036629 YjbJ superfamily TVD_07595 704c66e6b27a8564f64f07247fb4ca79 70 PIRSF PIRSF039008 1 66 3.7E-27 T 11-10-2018 IPR026042 Stress response protein YjbJ TVD_07595 704c66e6b27a8564f64f07247fb4ca79 70 SUPERFAMILY SSF69047 1 65 5.49E-19 T 11-10-2018 IPR036629 YjbJ superfamily TVD_07595 704c66e6b27a8564f64f07247fb4ca79 70 Pfam PF05532 CsbD-like 6 55 1.5E-12 T 11-10-2018 IPR008462 CsbD-like domain TVD_00525 d99758bf5698961ac89d240ec5e2fddb 301 SUPERFAMILY SSF53795 112 274 3.36E-13 T 11-10-2018 TVD_00525 d99758bf5698961ac89d240ec5e2fddb 301 TIGRFAM TIGR04352 HprK_rel_A: HprK-related kinase A 17 296 3.9E-117 T 11-10-2018 IPR027600 HprK-related kinase A TVD_00525 d99758bf5698961ac89d240ec5e2fddb 301 Gene3D G3DSA:3.40.50.300 112 181 1.4E-6 T 11-10-2018 TVD_00870 232246e2851acfc2c5489908041ea362 521 Gene3D G3DSA:3.40.50.1380 2 199 1.3E-79 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TVD_00870 232246e2851acfc2c5489908041ea362 521 SUPERFAMILY SSF53927 214 521 4.61E-127 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 TVD_00870 232246e2851acfc2c5489908041ea362 521 Pfam PF02142 MGS-like domain 19 131 6.8E-27 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain TVD_00870 232246e2851acfc2c5489908041ea362 521 SUPERFAMILY SSF52335 7 195 9.16E-66 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily TVD_00870 232246e2851acfc2c5489908041ea362 521 Gene3D G3DSA:3.40.140.20 386 521 1.1E-59 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TVD_00870 232246e2851acfc2c5489908041ea362 521 Gene3D G3DSA:3.40.140.20 211 364 3.5E-57 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TVD_00870 232246e2851acfc2c5489908041ea362 521 PIRSF PIRSF000414 1 521 1.2E-214 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TVD_00870 232246e2851acfc2c5489908041ea362 521 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 521 44.301 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TVD_00870 232246e2851acfc2c5489908041ea362 521 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 521 1.5E-225 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TVD_00870 232246e2851acfc2c5489908041ea362 521 SMART SM00851 19 132 6.0E-57 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain TVD_00870 232246e2851acfc2c5489908041ea362 521 SMART SM00798 137 453 1.2E-195 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TVD_00870 232246e2851acfc2c5489908041ea362 521 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 452 2.6E-116 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 TVD_12125 5053d52659888840d30f81e9b10e21a0 251 SUPERFAMILY SSF69572 2 247 5.49E-79 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 TVD_12125 5053d52659888840d30f81e9b10e21a0 251 Pfam PF00899 ThiF family 9 243 1.7E-62 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 TVD_12125 5053d52659888840d30f81e9b10e21a0 251 Gene3D G3DSA:3.40.50.720 1 250 1.9E-88 T 11-10-2018 TVD_01420 9484d1f2bed74d6970e84567402bac63 1139 SUPERFAMILY SSF50998 618 1007 8.24E-14 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TVD_01420 9484d1f2bed74d6970e84567402bac63 1139 Pfam PF05567 Neisseria PilC beta-propeller domain 670 959 1.3E-49 T 11-10-2018 IPR008707 PilC beta-propeller domain TVD_01420 9484d1f2bed74d6970e84567402bac63 1139 SMART SM00564 856 889 370.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TVD_01420 9484d1f2bed74d6970e84567402bac63 1139 SMART SM00564 735 779 170.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TVD_01420 9484d1f2bed74d6970e84567402bac63 1139 SMART SM00564 663 695 0.0028 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TVD_01420 9484d1f2bed74d6970e84567402bac63 1139 Gene3D G3DSA:2.130.10.10 644 1137 1.1E-12 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 TVD_08630 d1ccb00d85e008ef85c637acacf41cfc 150 SUPERFAMILY SSF51230 11 129 1.44E-26 T 11-10-2018 IPR011053 Single hybrid motif TVD_08630 d1ccb00d85e008ef85c637acacf41cfc 150 Gene3D G3DSA:2.40.50.100 8 129 1.2E-29 T 11-10-2018 TVD_08630 d1ccb00d85e008ef85c637acacf41cfc 150 Pfam PF01597 Glycine cleavage H-protein 16 132 5.0E-30 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate TVD_10650 330d1af4ac93c9d085ace1b12ef6f256 224 Pfam PF13183 4Fe-4S dicluster domain 18 80 1.3E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TVD_10650 330d1af4ac93c9d085ace1b12ef6f256 224 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 21 32 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_10650 330d1af4ac93c9d085ace1b12ef6f256 224 Gene3D G3DSA:1.10.1060.10 10 100 2.8E-7 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_10650 330d1af4ac93c9d085ace1b12ef6f256 224 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 67 78 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TVD_10650 330d1af4ac93c9d085ace1b12ef6f256 224 SUPERFAMILY SSF46548 10 97 7.67E-15 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 TVD_05035 199a02e2dce00a52fd973714b5959f50 69 Pfam PF11381 Protein of unknown function (DUF3185) 5 62 2.4E-21 T 11-10-2018 IPR021521 Protein of unknown function DUF3185 TVD_02495 1236e0324a83a43a35027916bce06f73 456 Gene3D G3DSA:1.20.1250.20 1 388 5.0E-71 T 11-10-2018 TVD_02495 1236e0324a83a43a35027916bce06f73 456 Pfam PF07690 Major Facilitator Superfamily 13 312 5.0E-31 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TVD_02495 1236e0324a83a43a35027916bce06f73 456 SUPERFAMILY SSF103473 2 393 1.15E-51 T 11-10-2018 IPR036259 MFS transporter superfamily TVD_12205 ebc1579cb83598647a54a21ed035397c 223 Gene3D G3DSA:2.60.120.620 2 206 6.9E-7 T 11-10-2018 TVD_05430 b0c6d34f4d6f9f6cc1c33ad48ac80038 530 Gene3D G3DSA:1.20.1600.10 39 516 5.5E-73 T 11-10-2018 TVD_05430 b0c6d34f4d6f9f6cc1c33ad48ac80038 530 SUPERFAMILY SSF56954 5 513 6.67E-66 T 11-10-2018 TVD_05430 b0c6d34f4d6f9f6cc1c33ad48ac80038 530 Pfam PF02321 Outer membrane efflux protein 63 293 2.7E-21 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_05430 b0c6d34f4d6f9f6cc1c33ad48ac80038 530 Pfam PF02321 Outer membrane efflux protein 320 510 3.6E-20 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_03650 f69965955577ebf07a12adfb7ffec817 482 Pfam PF00361 Proton-conducting membrane transporter 126 420 2.1E-77 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03650 f69965955577ebf07a12adfb7ffec817 482 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 473 18.831 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 TVD_03650 f69965955577ebf07a12adfb7ffec817 482 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 414 433 2.4E-9 T 11-10-2018 TVD_03650 f69965955577ebf07a12adfb7ffec817 482 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 149 170 2.4E-9 T 11-10-2018 TVD_03650 f69965955577ebf07a12adfb7ffec817 482 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 2.4E-9 T 11-10-2018 TVD_03650 f69965955577ebf07a12adfb7ffec817 482 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 217 238 2.4E-9 T 11-10-2018 TVD_03650 f69965955577ebf07a12adfb7ffec817 482 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 472 3.2E-150 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 TVD_05055 8bee7e5112889e7c10e4625083ea3e42 405 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 260 385 4.2E-37 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 TVD_05055 8bee7e5112889e7c10e4625083ea3e42 405 SUPERFAMILY SSF64383 258 393 7.32E-33 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 TVD_05055 8bee7e5112889e7c10e4625083ea3e42 405 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 260 390 1.0E-17 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 TVD_05055 8bee7e5112889e7c10e4625083ea3e42 405 SMART SM00771 257 387 3.2E-30 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 TVD_05055 8bee7e5112889e7c10e4625083ea3e42 405 Gene3D G3DSA:3.30.1400.10 256 393 1.8E-39 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 TVD_00225 07745a370e2376edbdcdfefc1efe6109 114 Gene3D G3DSA:3.30.460.10 21 114 3.6E-17 T 11-10-2018 TVD_00225 07745a370e2376edbdcdfefc1efe6109 114 Pfam PF01909 Nucleotidyltransferase domain 30 105 8.9E-8 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TVD_00225 07745a370e2376edbdcdfefc1efe6109 114 SUPERFAMILY SSF81301 22 114 9.06E-15 T 11-10-2018 TVD_03735 337d524d74469769f1c6e369ce3eb5a1 149 Pfam PF10116 Protein required for attachment to host cells 5 144 2.9E-45 T 11-10-2018 IPR019291 Host attachment protein TVD_07170 a63d64313ac7e3e8beaf4e7b439533aa 268 SUPERFAMILY SSF55073 106 261 1.44E-41 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_07170 a63d64313ac7e3e8beaf4e7b439533aa 268 Pfam PF00990 Diguanylate cyclase, GGDEF domain 103 258 3.1E-35 T 11-10-2018 IPR000160 GGDEF domain TVD_07170 a63d64313ac7e3e8beaf4e7b439533aa 268 SMART SM00267 90 262 7.9E-44 T 11-10-2018 IPR000160 GGDEF domain TVD_07170 a63d64313ac7e3e8beaf4e7b439533aa 268 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 97 261 3.5E-42 T 11-10-2018 IPR000160 GGDEF domain TVD_07170 a63d64313ac7e3e8beaf4e7b439533aa 268 Gene3D G3DSA:3.30.70.270 95 266 2.8E-48 T 11-10-2018 TVD_13540 c1fd8aad8da70cf66969a6436b4b4078 251 PRINTS PR00091 Nitrogenase component II signature 9 22 8.2E-6 T 11-10-2018 TVD_13540 c1fd8aad8da70cf66969a6436b4b4078 251 PRINTS PR00091 Nitrogenase component II signature 132 147 8.2E-6 T 11-10-2018 TVD_13540 c1fd8aad8da70cf66969a6436b4b4078 251 PRINTS PR00091 Nitrogenase component II signature 31 46 8.2E-6 T 11-10-2018 TVD_13540 c1fd8aad8da70cf66969a6436b4b4078 251 Gene3D G3DSA:3.40.50.300 1 251 5.6E-78 T 11-10-2018 TVD_13540 c1fd8aad8da70cf66969a6436b4b4078 251 Pfam PF13614 AAA domain 4 177 6.8E-60 T 11-10-2018 IPR025669 AAA domain TVD_13540 c1fd8aad8da70cf66969a6436b4b4078 251 SUPERFAMILY SSF52540 4 250 2.86E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_01955 3145565f04b7bb5c5ec718196f02919e 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 45.188 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_01955 3145565f04b7bb5c5ec718196f02919e 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 4.6E-114 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 TVD_01955 3145565f04b7bb5c5ec718196f02919e 419 Gene3D G3DSA:3.65.10.10 6 414 1.5E-171 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TVD_01955 3145565f04b7bb5c5ec718196f02919e 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 3.2E-181 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 TVD_01955 3145565f04b7bb5c5ec718196f02919e 419 Gene3D G3DSA:3.65.10.10 21 229 1.5E-171 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 TVD_01955 3145565f04b7bb5c5ec718196f02919e 419 SUPERFAMILY SSF55205 1 416 1.57E-144 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 TVD_13305 850fd42ffa9afc2961c2029e646af981 115 Pfam PF11225 Protein of unknown function (DUF3024) 60 114 2.0E-20 T 11-10-2018 IPR021388 Bacteriophage 933W, L0084 TVD_05730 7556fc092a644297d08e5d0d1bde03a6 124 SUPERFAMILY SSF64076 3 122 2.62E-34 T 11-10-2018 IPR036748 MTH938-like superfamily TVD_05730 7556fc092a644297d08e5d0d1bde03a6 124 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 121 4.4E-31 T 11-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein TVD_05730 7556fc092a644297d08e5d0d1bde03a6 124 Gene3D G3DSA:3.40.1230.10 3 124 1.4E-38 T 11-10-2018 IPR036748 MTH938-like superfamily TVD_04815 cc22d79e25c645a894f41b745f5389f8 163 SUPERFAMILY SSF75169 38 161 1.81E-11 T 11-10-2018 IPR027396 DsrEFH-like TVD_04815 cc22d79e25c645a894f41b745f5389f8 163 Pfam PF02635 DsrE/DsrF-like family 97 161 2.3E-4 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_04815 cc22d79e25c645a894f41b745f5389f8 163 Gene3D G3DSA:3.40.1260.10 35 161 1.1E-6 T 11-10-2018 IPR027396 DsrEFH-like TVD_00830 2a83f18ab0c0f13512a18e56c86dff14 213 Gene3D G3DSA:3.40.50.620 10 207 2.7E-37 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_00830 2a83f18ab0c0f13512a18e56c86dff14 213 Pfam PF06508 Queuosine biosynthesis protein QueC 11 200 2.0E-29 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 TVD_00830 2a83f18ab0c0f13512a18e56c86dff14 213 SUPERFAMILY SSF52402 11 208 6.42E-34 T 11-10-2018 TVD_01315 10572ab181ed70260dd4e7f6dc3e980f 484 PIRSF PIRSF006247 1 484 4.4E-182 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 TVD_01315 10572ab181ed70260dd4e7f6dc3e980f 484 Pfam PF02386 Cation transport protein 39 478 1.1E-84 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 TVD_01315 10572ab181ed70260dd4e7f6dc3e980f 484 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 86 467 2.3E-108 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 TVD_05495 1cec9e66fe69cfa7972c100027b1e3a8 830 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 158 230 3.6E-18 T 11-10-2018 IPR020012 Motility protein FimV, N-terminal TVD_05495 1cec9e66fe69cfa7972c100027b1e3a8 830 SUPERFAMILY SSF48452 550 810 5.69E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_05495 1cec9e66fe69cfa7972c100027b1e3a8 830 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 784 827 6.0E-13 T 11-10-2018 IPR020011 Motility protein FimV, C-terminal TVD_05495 1cec9e66fe69cfa7972c100027b1e3a8 830 Gene3D G3DSA:1.20.58.2200 766 827 1.3E-15 T 11-10-2018 IPR038440 FimV, C-terminal domain superfamily TVD_06245 2df498e449e8c5348f3f05a562aade4c 112 Pfam PF02049 Flagellar hook-basal body complex protein FliE 25 112 1.1E-28 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TVD_06245 2df498e449e8c5348f3f05a562aade4c 112 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 41 57 1.6E-10 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TVD_06245 2df498e449e8c5348f3f05a562aade4c 112 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 76 92 1.6E-10 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TVD_06245 2df498e449e8c5348f3f05a562aade4c 112 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 97 110 1.6E-10 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TVD_06245 2df498e449e8c5348f3f05a562aade4c 112 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 112 16.509 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TVD_06245 2df498e449e8c5348f3f05a562aade4c 112 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 9 112 1.3E-21 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TVD_11790 078eb10f559bca54de3bf84b58bed784 266 Pfam PF01578 Cytochrome C assembly protein 44 262 1.1E-23 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 TVD_04645 70f63e6666b7b71e04b2a0b35c2c115c 189 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 189 1.1E-49 T 11-10-2018 IPR018636 Protein of unknown function DUF2058 TVD_07240 5d46c7087b9e539e143ad0c592fde734 167 Gene3D G3DSA:3.30.910.20 22 165 4.6E-41 T 11-10-2018 IPR024930 Skp domain superfamily TVD_07240 5d46c7087b9e539e143ad0c592fde734 167 Pfam PF03938 Outer membrane protein (OmpH-like) 15 163 3.1E-35 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TVD_07240 5d46c7087b9e539e143ad0c592fde734 167 PIRSF PIRSF002094 1 167 1.7E-49 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TVD_07240 5d46c7087b9e539e143ad0c592fde734 167 SMART SM00935 11 165 1.2E-51 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 TVD_07240 5d46c7087b9e539e143ad0c592fde734 167 SUPERFAMILY SSF111384 23 164 1.57E-35 T 11-10-2018 TVD_04295 9990f4b2e2e35f16b6e24b4616d4e0df 96 SUPERFAMILY SSF54913 4 92 1.36E-17 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TVD_04295 9990f4b2e2e35f16b6e24b4616d4e0df 96 Gene3D G3DSA:3.30.70.120 4 96 1.2E-20 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TVD_06810 905b309ca201afeb24c0eac23b003ca3 329 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 93 111 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 TVD_06810 905b309ca201afeb24c0eac23b003ca3 329 Gene3D G3DSA:3.20.20.70 8 249 8.5E-75 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 TVD_06810 905b309ca201afeb24c0eac23b003ca3 329 Gene3D G3DSA:1.20.120.1460 252 321 4.6E-14 T 11-10-2018 TVD_06810 905b309ca201afeb24c0eac23b003ca3 329 SUPERFAMILY SSF51395 10 319 4.35E-69 T 11-10-2018 TVD_06810 905b309ca201afeb24c0eac23b003ca3 329 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 11 322 1.0E-130 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 TVD_06810 905b309ca201afeb24c0eac23b003ca3 329 Pfam PF01207 Dihydrouridine synthase (Dus) 14 316 1.6E-79 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TVD_06810 905b309ca201afeb24c0eac23b003ca3 329 PIRSF PIRSF006621 2 324 3.0E-74 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TVD_06810 905b309ca201afeb24c0eac23b003ca3 329 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 6 326 49.814 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 TVD_08910 6944d9871096da872d87e8455da26464 318 Pfam PF00805 Pentapeptide repeats (8 copies) 205 239 1.8E-9 T 11-10-2018 IPR001646 Pentapeptide repeat TVD_08910 6944d9871096da872d87e8455da26464 318 Pfam PF00805 Pentapeptide repeats (8 copies) 266 301 9.2E-9 T 11-10-2018 IPR001646 Pentapeptide repeat TVD_08910 6944d9871096da872d87e8455da26464 318 Gene3D G3DSA:2.160.20.80 184 313 1.3E-30 T 11-10-2018 TVD_08910 6944d9871096da872d87e8455da26464 318 SUPERFAMILY SSF141571 194 304 5.49E-28 T 11-10-2018 TVD_05540 ac0f7babd397f5ddad3e32e1037cf056 183 Pfam PF02674 Colicin V production protein 4 143 3.4E-38 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 TVD_05700 d59374a354f36af37b6ee2bac8bdf739 185 Pfam PF01713 Smr domain 95 176 2.8E-22 T 11-10-2018 IPR002625 Smr domain TVD_05700 d59374a354f36af37b6ee2bac8bdf739 185 Gene3D G3DSA:3.30.1370.110 49 181 1.8E-42 T 11-10-2018 TVD_05700 d59374a354f36af37b6ee2bac8bdf739 185 SMART SM00463 92 176 1.6E-13 T 11-10-2018 IPR002625 Smr domain TVD_05700 d59374a354f36af37b6ee2bac8bdf739 185 SUPERFAMILY SSF160443 93 176 2.48E-17 T 11-10-2018 IPR036063 Smr domain superfamily TVD_02200 b040a63dc69b3c3beb675bc4b739bea3 240 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 5 227 21.631 T 11-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 TVD_02200 b040a63dc69b3c3beb675bc4b739bea3 240 Pfam PF03799 Cell division protein FtsQ 106 219 4.6E-17 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB TVD_02200 b040a63dc69b3c3beb675bc4b739bea3 240 Pfam PF08478 POTRA domain, FtsQ-type 34 101 3.0E-12 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type TVD_02200 b040a63dc69b3c3beb675bc4b739bea3 240 Gene3D G3DSA:3.10.20.310 33 101 4.6E-16 T 11-10-2018 TVD_02200 b040a63dc69b3c3beb675bc4b739bea3 240 Gene3D G3DSA:3.40.50.11690 103 232 5.2E-32 T 11-10-2018 TVD_09785 da345e8da0e7ecc0f30b380d2e9238f8 215 Pfam PF06226 Protein of unknown function (DUF1007) 11 214 8.9E-52 T 11-10-2018 IPR010412 Protein of unknown function DUF1007 TVD_06875 b6435c0a0d3b8d55aef142586c849b3e 280 Gene3D G3DSA:3.30.1330.60 121 276 5.6E-45 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_06875 b6435c0a0d3b8d55aef142586c849b3e 280 SUPERFAMILY SSF103088 153 268 1.83E-30 T 11-10-2018 IPR036737 OmpA-like domain superfamily TVD_06875 b6435c0a0d3b8d55aef142586c849b3e 280 Pfam PF00691 OmpA family 165 262 7.2E-18 T 11-10-2018 IPR006665 OmpA-like domain TVD_06985 ca151f2124a043a036585a2f8f09b246 342 SUPERFAMILY SSF55298 198 329 4.54E-9 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TVD_06985 ca151f2124a043a036585a2f8f09b246 342 Gene3D G3DSA:3.30.1330.40 207 333 3.1E-14 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 TVD_09110 9c5bff8a29f2f2261eddd79d4befc56e 103 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 12 92 2.0E-21 T 11-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system TVD_09110 9c5bff8a29f2f2261eddd79d4befc56e 103 Gene3D G3DSA:3.10.450.530 3 95 6.7E-10 T 11-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily TVD_01725 09bd4b84369a02017507f7ba15ddead7 161 Pfam PF13430 Domain of unknown function (DUF4112) 18 117 3.8E-32 T 11-10-2018 IPR025187 Protein of unknown function DUF4112 TVD_01225 609a5b8d9c64cba411deab5a6d8ee3cd 151 Gene3D G3DSA:2.40.50.100 72 150 7.7E-33 T 11-10-2018 TVD_01225 609a5b8d9c64cba411deab5a6d8ee3cd 151 Pfam PF00364 Biotin-requiring enzyme 77 150 3.2E-24 T 11-10-2018 IPR000089 Biotin/lipoyl attachment TVD_01225 609a5b8d9c64cba411deab5a6d8ee3cd 151 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 150 4.2E-55 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TVD_01225 609a5b8d9c64cba411deab5a6d8ee3cd 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 97 111 6.5E-18 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TVD_01225 609a5b8d9c64cba411deab5a6d8ee3cd 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 80 93 6.5E-18 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TVD_01225 609a5b8d9c64cba411deab5a6d8ee3cd 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 112 125 6.5E-18 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 TVD_01225 609a5b8d9c64cba411deab5a6d8ee3cd 151 SUPERFAMILY SSF51230 75 150 3.66E-26 T 11-10-2018 IPR011053 Single hybrid motif TVD_01225 609a5b8d9c64cba411deab5a6d8ee3cd 151 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 107 124 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 TVD_02890 b4d6654a5d6584c2453cfea88d972522 161 Gene3D G3DSA:3.40.50.620 2 161 2.6E-34 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_02890 b4d6654a5d6584c2453cfea88d972522 161 SUPERFAMILY SSF52402 4 161 4.02E-30 T 11-10-2018 TVD_02890 b4d6654a5d6584c2453cfea88d972522 161 PRINTS PR01438 Universal stress protein signature 121 133 2.4E-13 T 11-10-2018 IPR006015 Universal stress protein A TVD_02890 b4d6654a5d6584c2453cfea88d972522 161 PRINTS PR01438 Universal stress protein signature 3 21 2.4E-13 T 11-10-2018 IPR006015 Universal stress protein A TVD_02890 b4d6654a5d6584c2453cfea88d972522 161 PRINTS PR01438 Universal stress protein signature 139 161 2.4E-13 T 11-10-2018 IPR006015 Universal stress protein A TVD_02890 b4d6654a5d6584c2453cfea88d972522 161 Pfam PF00582 Universal stress protein family 4 160 1.2E-24 T 11-10-2018 IPR006016 UspA TVD_03975 3ce66e843193da3f9fccee332c8f6ac5 128 Gene3D G3DSA:1.10.10.10 8 125 5.8E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_03975 3ce66e843193da3f9fccee332c8f6ac5 128 SUPERFAMILY SSF46785 17 113 3.54E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_03975 3ce66e843193da3f9fccee332c8f6ac5 128 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 35 94 1.0E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TVD_04345 96b71621f2e1adaede1f769a7ec77358 268 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 261 9.1E-82 T 11-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like TVD_04345 96b71621f2e1adaede1f769a7ec77358 268 SUPERFAMILY SSF53098 4 236 9.02E-37 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_04345 96b71621f2e1adaede1f769a7ec77358 268 Gene3D G3DSA:3.30.420.10 46 219 5.0E-16 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TVD_01835 167646d3a3f9b5cbbe0eced9cd4eb33c 145 SUPERFAMILY SSF54427 7 122 1.73E-22 T 11-10-2018 IPR032710 NTF2-like domain superfamily TVD_01835 167646d3a3f9b5cbbe0eced9cd4eb33c 145 Pfam PF13474 SnoaL-like domain 8 122 6.8E-16 T 11-10-2018 IPR037401 SnoaL-like domain TVD_01835 167646d3a3f9b5cbbe0eced9cd4eb33c 145 Gene3D G3DSA:3.10.450.50 1 132 1.2E-28 T 11-10-2018 TVD_00240 13a90f490ff5f994f8934ae08d6a8e40 215 Pfam PF02563 Polysaccharide biosynthesis/export protein 49 120 8.7E-21 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 TVD_00240 13a90f490ff5f994f8934ae08d6a8e40 215 Gene3D G3DSA:3.30.1950.10 55 124 1.1E-11 T 11-10-2018 TVD_00240 13a90f490ff5f994f8934ae08d6a8e40 215 Gene3D G3DSA:3.10.560.10 125 212 1.6E-14 T 11-10-2018 TVD_00240 13a90f490ff5f994f8934ae08d6a8e40 215 TIGRFAM TIGR03027 pepcterm_export: putative polysaccharide export protein, PEP-CTERM sytem-associated 51 215 2.0E-70 T 11-10-2018 IPR017477 PEP-CTERM, putative polysaccharide export protein TVD_02910 b25ed4f3b578968e5980b2216ac12bb6 158 Gene3D G3DSA:3.90.280.10 3 158 2.1E-49 T 11-10-2018 IPR036610 PEBP-like superfamily TVD_02910 b25ed4f3b578968e5980b2216ac12bb6 158 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 26 153 3.1E-30 T 11-10-2018 IPR005247 YbhB/YbcL TVD_02910 b25ed4f3b578968e5980b2216ac12bb6 158 SUPERFAMILY SSF49777 8 157 4.84E-42 T 11-10-2018 IPR036610 PEBP-like superfamily TVD_02910 b25ed4f3b578968e5980b2216ac12bb6 158 Pfam PF01161 Phosphatidylethanolamine-binding protein 21 155 1.4E-35 T 11-10-2018 IPR008914 Phosphatidylethanolamine-binding protein TVD_07505 ffbebe0196a7410f8ec7f6e28c0d6e24 67 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 9.8E-15 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 TVD_09170 765bcf68ac134a0f99d641291fc12da7 166 SUPERFAMILY SSF54593 4 159 3.49E-36 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TVD_09170 765bcf68ac134a0f99d641291fc12da7 166 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 155 3.0E-24 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TVD_09170 765bcf68ac134a0f99d641291fc12da7 166 ProSitePatterns PS00934 Glyoxalase I signature 1. 13 34 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 TVD_09170 765bcf68ac134a0f99d641291fc12da7 166 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 3 159 4.8E-44 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 TVD_09170 765bcf68ac134a0f99d641291fc12da7 166 Gene3D G3DSA:3.10.180.10 1 162 1.4E-61 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TVD_09170 765bcf68ac134a0f99d641291fc12da7 166 ProSitePatterns PS00935 Glyoxalase I signature 2. 99 115 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 TVD_10215 4f7b45e4f791c98184c3861843f5264c 480 Gene3D G3DSA:3.30.2290.10 17 237 6.8E-19 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal TVD_10215 4f7b45e4f791c98184c3861843f5264c 480 SUPERFAMILY SSF111283 21 477 9.55E-134 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 TVD_10215 4f7b45e4f791c98184c3861843f5264c 480 Pfam PF01523 Putative modulator of DNA gyrase 37 329 7.9E-69 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 TVD_10215 4f7b45e4f791c98184c3861843f5264c 480 PIRSF PIRSF004919 17 478 3.8E-136 T 11-10-2018 IPR025502 TldD TVD_04590 e0eb20dc3dd6c34047b9fcb1d60bca06 353 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 342 25.708 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 TVD_04590 e0eb20dc3dd6c34047b9fcb1d60bca06 353 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 341 3.0E-118 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 TVD_04590 e0eb20dc3dd6c34047b9fcb1d60bca06 353 Pfam PF03116 NQR2, RnfD, RnfE family 5 340 1.1E-99 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 TVD_13485 746dc60f7b134c60ed153731688bed11 261 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 261 50.316 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 TVD_13485 746dc60f7b134c60ed153731688bed11 261 SUPERFAMILY SSF52540 18 234 1.15E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_13485 746dc60f7b134c60ed153731688bed11 261 Gene3D G3DSA:1.20.1050.90 20 197 5.0E-30 T 11-10-2018 TVD_04495 327ada4630ee39255000795e9be49c8d 132 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 9 102 6.0E-23 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 TVD_04495 327ada4630ee39255000795e9be49c8d 132 Pfam PF03334 Na+/H+ antiporter subunit 9 88 2.7E-25 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 TVD_08565 3c1084c3292e45410d72e4a38cb00518 200 Pfam PF02545 Maf-like protein 7 190 2.5E-42 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 TVD_08565 3c1084c3292e45410d72e4a38cb00518 200 Gene3D G3DSA:3.90.950.10 6 195 9.7E-59 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TVD_08565 3c1084c3292e45410d72e4a38cb00518 200 TIGRFAM TIGR00172 maf: septum formation protein Maf 7 188 1.7E-47 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 TVD_08565 3c1084c3292e45410d72e4a38cb00518 200 SUPERFAMILY SSF52972 6 190 9.16E-56 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like TVD_08565 3c1084c3292e45410d72e4a38cb00518 200 PIRSF PIRSF006305 2 195 1.3E-41 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 TVD_08565 3c1084c3292e45410d72e4a38cb00518 200 Hamap MF_00528 Septum formation protein Maf [maf]. 7 195 28.446 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 TVD_02735 759f2bb808ab79931735f4fa88cea330 248 Pfam PF08808 RES domain 62 208 3.1E-26 T 11-10-2018 IPR014914 RES domain TVD_02735 759f2bb808ab79931735f4fa88cea330 248 SMART SM00953 70 207 7.2E-27 T 11-10-2018 IPR014914 RES domain TVD_01815 86ec50ffb9197d7b08f4d601e058d916 193 Gene3D G3DSA:1.10.287.540 57 92 2.3E-9 T 11-10-2018 TVD_01815 86ec50ffb9197d7b08f4d601e058d916 193 Gene3D G3DSA:3.30.70.60 94 193 1.3E-34 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 TVD_01815 86ec50ffb9197d7b08f4d601e058d916 193 Pfam PF04350 Pilus assembly protein, PilO 49 191 1.5E-49 T 11-10-2018 IPR007445 Pilus assembly protein, PilO TVD_01815 86ec50ffb9197d7b08f4d601e058d916 193 PIRSF PIRSF016482 1 193 2.7E-55 T 11-10-2018 IPR007445 Pilus assembly protein, PilO TVD_07350 98cf7d09d7bb595847274cab25a11442 65 Pfam PF10049 Protein of unknown function (DUF2283) 2 50 1.3E-11 T 11-10-2018 IPR019270 Protein of unknown function DUF2283 TVD_12430 c63cbe6b621232f9d8b54ccd89765a62 336 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 49 220 2.2E-14 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 TVD_12430 c63cbe6b621232f9d8b54ccd89765a62 336 Gene3D G3DSA:3.40.630.10 4 289 1.3E-28 T 11-10-2018 TVD_12430 c63cbe6b621232f9d8b54ccd89765a62 336 SUPERFAMILY SSF53187 18 277 2.08E-40 T 11-10-2018 TVD_11945 9009590b48719b7f33a2502bc5cd4fd0 170 PIRSF PIRSF004638 1 145 3.8E-50 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 TVD_11945 9009590b48719b7f33a2502bc5cd4fd0 170 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 140 2.3E-47 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 TVD_09340 46e36d92a013723b1beff7159a9fcc05 572 Pfam PF00361 Proton-conducting membrane transporter 118 371 1.3E-35 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_09340 46e36d92a013723b1beff7159a9fcc05 572 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 124 143 3.2E-10 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_09340 46e36d92a013723b1beff7159a9fcc05 572 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 154 178 3.2E-10 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_09340 46e36d92a013723b1beff7159a9fcc05 572 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 219 243 3.2E-10 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_09340 46e36d92a013723b1beff7159a9fcc05 572 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 312 331 3.2E-10 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_09275 335b6ea1a146a275880b7b0eb215e2ce 324 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 19 307 1.1E-28 T 11-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD TVD_09275 335b6ea1a146a275880b7b0eb215e2ce 324 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 18 303 3.5E-53 T 11-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD TVD_09855 5010b79d0d48d8cee64dac4721218ba3 219 Gene3D G3DSA:1.25.40.10 114 214 1.8E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_09855 5010b79d0d48d8cee64dac4721218ba3 219 SUPERFAMILY SSF48452 125 193 4.8E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 TVD_11985 be7f1baef21678797ac8f84c47761d6b 272 Pfam PF01925 Sulfite exporter TauE/SafE 17 269 1.0E-46 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 TVD_04835 d2ea46bae748527ef9a954bb37eeb52a 335 Pfam PF13411 MerR HTH family regulatory protein 22 90 4.3E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TVD_04835 d2ea46bae748527ef9a954bb37eeb52a 335 SUPERFAMILY SSF46955 22 93 6.87E-16 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily TVD_04835 d2ea46bae748527ef9a954bb37eeb52a 335 Gene3D G3DSA:1.10.1660.10 16 91 1.3E-25 T 11-10-2018 TVD_04835 d2ea46bae748527ef9a954bb37eeb52a 335 SMART SM00422 22 91 1.6E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TVD_06785 88b1cba11a02f335399438942ed38607 279 SMART SM00471 103 239 2.3E-8 T 11-10-2018 IPR003607 HD/PDEase domain TVD_06785 88b1cba11a02f335399438942ed38607 279 Gene3D G3DSA:1.10.3210.10 1 277 9.8E-68 T 11-10-2018 TVD_06785 88b1cba11a02f335399438942ed38607 279 SUPERFAMILY SSF109604 5 273 6.28E-62 T 11-10-2018 TVD_06785 88b1cba11a02f335399438942ed38607 279 Pfam PF08668 HDOD domain 15 208 4.0E-53 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD TVD_02635 c2d2705616ea5e189e2cdcb442b10b50 272 Gene3D G3DSA:3.30.479.30 48 179 1.8E-47 T 11-10-2018 TVD_02635 c2d2705616ea5e189e2cdcb442b10b50 272 SUPERFAMILY SSF117892 51 184 5.23E-45 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily TVD_02635 c2d2705616ea5e189e2cdcb442b10b50 272 SMART SM00244 20 177 1.5E-61 T 11-10-2018 IPR001107 Band 7 domain TVD_02635 c2d2705616ea5e189e2cdcb442b10b50 272 PRINTS PR00721 Stomatin signature 153 171 2.7E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 TVD_02635 c2d2705616ea5e189e2cdcb442b10b50 272 PRINTS PR00721 Stomatin signature 74 95 2.7E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 TVD_02635 c2d2705616ea5e189e2cdcb442b10b50 272 PRINTS PR00721 Stomatin signature 109 126 2.7E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 TVD_02635 c2d2705616ea5e189e2cdcb442b10b50 272 PRINTS PR00721 Stomatin signature 129 152 2.7E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 TVD_02635 c2d2705616ea5e189e2cdcb442b10b50 272 PRINTS PR00721 Stomatin signature 197 220 2.7E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 TVD_02635 c2d2705616ea5e189e2cdcb442b10b50 272 PRINTS PR00721 Stomatin signature 27 49 2.7E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 TVD_02635 c2d2705616ea5e189e2cdcb442b10b50 272 PRINTS PR00721 Stomatin signature 172 193 2.7E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 TVD_02635 c2d2705616ea5e189e2cdcb442b10b50 272 Pfam PF01145 SPFH domain / Band 7 family 25 193 3.1E-33 T 11-10-2018 IPR001107 Band 7 domain TVD_10965 1b960cce6bee71f03a5d8dd05792f9e8 188 Gene3D G3DSA:1.10.10.880 6 74 7.1E-18 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 TVD_10965 1b960cce6bee71f03a5d8dd05792f9e8 188 SUPERFAMILY SSF89069 8 74 9.68E-16 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 TVD_10965 1b960cce6bee71f03a5d8dd05792f9e8 188 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 8 81 1.7E-17 T 11-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 TVD_05235 3b094441d776569c6babcaaf05917e12 82 Pfam PF07362 Post-segregation antitoxin CcdA 12 82 3.4E-27 T 11-10-2018 IPR009956 Post-segregation antitoxin CcdA TVD_13770 4e86e09d182a9e1ea6aadc6eaac44357 247 Pfam PF00857 Isochorismatase family 83 235 1.7E-32 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 TVD_13770 4e86e09d182a9e1ea6aadc6eaac44357 247 Gene3D G3DSA:3.40.50.850 12 247 3.4E-51 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TVD_13770 4e86e09d182a9e1ea6aadc6eaac44357 247 SUPERFAMILY SSF52499 30 240 5.36E-47 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TVD_10555 76b19157db8d20e52caf39fecf067838 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 265 8.8E-28 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 TVD_10555 76b19157db8d20e52caf39fecf067838 280 Gene3D G3DSA:1.10.3720.10 83 273 2.2E-37 T 11-10-2018 IPR035906 MetI-like superfamily TVD_10555 76b19157db8d20e52caf39fecf067838 280 SUPERFAMILY SSF161098 86 269 8.11E-43 T 11-10-2018 IPR035906 MetI-like superfamily TVD_05000 d9e6ad1e51f9bf40c438cd41e4e49269 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 7.5E-50 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 TVD_05000 d9e6ad1e51f9bf40c438cd41e4e49269 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.056 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 TVD_07635 d4e10e143051f0232378a3d371a126a5 394 Pfam PF02687 FtsX-like permease family 299 387 1.4E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TVD_07635 d4e10e143051f0232378a3d371a126a5 394 Pfam PF12704 MacB-like periplasmic core domain 17 238 6.7E-25 T 11-10-2018 IPR025857 MacB-like periplasmic core domain TVD_08245 17158802a224661ef8547b201110f2c7 78 SUPERFAMILY SSF143100 5 65 5.1E-10 T 11-10-2018 IPR035069 TTHA1013/TTHA0281-like TVD_08245 17158802a224661ef8547b201110f2c7 78 Gene3D G3DSA:3.30.160.250 5 78 1.1E-11 T 11-10-2018 TVD_06695 287512298ea9a937dacb52ff3d22416a 329 Pfam PF13177 DNA polymerase III, delta subunit 16 172 3.9E-36 T 11-10-2018 TVD_06695 287512298ea9a937dacb52ff3d22416a 329 Gene3D G3DSA:3.40.50.300 9 173 1.1E-46 T 11-10-2018 TVD_06695 287512298ea9a937dacb52ff3d22416a 329 SUPERFAMILY SSF52540 12 209 3.23E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_03350 a0472506fd76723147294c351f732146 109 Gene3D G3DSA:3.30.70.120 2 105 8.8E-9 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TVD_03350 a0472506fd76723147294c351f732146 109 SUPERFAMILY SSF54913 5 99 1.96E-6 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TVD_01045 bbc79a5cab5a50814910c18328b203c5 173 SUPERFAMILY SSF52833 4 169 2.53E-43 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_01045 bbc79a5cab5a50814910c18328b203c5 173 Gene3D G3DSA:3.40.30.10 22 170 4.6E-45 T 11-10-2018 TVD_01045 bbc79a5cab5a50814910c18328b203c5 173 ProSitePatterns PS00194 Thioredoxin family active site. 62 80 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TVD_01045 bbc79a5cab5a50814910c18328b203c5 173 Pfam PF00578 AhpC/TSA family 39 150 2.9E-28 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TVD_09035 ebf5a38706a02d21aa61e856527e6f18 131 Pfam PF17228 Sulphur globule protein 38 126 1.9E-11 T 11-10-2018 IPR035173 Sulphur globule protein TVD_02755 b044ad98f81e80da1df78d0e835a7d00 303 PIRSF PIRSF016020 2 302 4.0E-52 T 11-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 TVD_02755 b044ad98f81e80da1df78d0e835a7d00 303 SUPERFAMILY SSF74650 12 300 2.7E-57 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 TVD_02755 b044ad98f81e80da1df78d0e835a7d00 303 Gene3D G3DSA:2.70.98.10 3 303 1.4E-79 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 TVD_02755 b044ad98f81e80da1df78d0e835a7d00 303 Pfam PF01263 Aldose 1-epimerase 27 300 1.2E-44 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 TVD_01610 f3b064d8cb9e5fe4437b28b07e42e500 103 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 9 91 2.4E-30 T 11-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 TVD_03160 45203f0c284ae22dfd44ca6f1542b9cd 86 SUPERFAMILY SSF110324 2 80 3.49E-34 T 11-10-2018 TVD_03160 45203f0c284ae22dfd44ca6f1542b9cd 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 73 2.0E-13 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_03160 45203f0c284ae22dfd44ca6f1542b9cd 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TVD_03160 45203f0c284ae22dfd44ca6f1542b9cd 86 Pfam PF01016 Ribosomal L27 protein 2 82 3.1E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_03160 45203f0c284ae22dfd44ca6f1542b9cd 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 6.2E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_03160 45203f0c284ae22dfd44ca6f1542b9cd 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 6.2E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_03160 45203f0c284ae22dfd44ca6f1542b9cd 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 6.2E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_03160 45203f0c284ae22dfd44ca6f1542b9cd 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 8.3E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_03160 45203f0c284ae22dfd44ca6f1542b9cd 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.592 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_03160 45203f0c284ae22dfd44ca6f1542b9cd 86 Gene3D G3DSA:2.40.50.100 21 86 2.5E-29 T 11-10-2018 TVD_05190 57e14e9a3e8d135df0077550bd24ccc3 136 Gene3D G3DSA:1.20.120.580 1 136 4.0E-17 T 11-10-2018 IPR037038 Bsu32300-like superfamily TVD_05190 57e14e9a3e8d135df0077550bd24ccc3 136 Pfam PF01934 Protein of unknown function DUF86 27 131 1.4E-24 T 11-10-2018 IPR008201 Protein of unknown function DUF86 TVD_03805 f55174abe5234586e9ec96740a49e6a5 504 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 337 490 6.4E-38 T 11-10-2018 IPR000160 GGDEF domain TVD_03805 f55174abe5234586e9ec96740a49e6a5 504 Pfam PF00990 Diguanylate cyclase, GGDEF domain 342 487 2.1E-39 T 11-10-2018 IPR000160 GGDEF domain TVD_03805 f55174abe5234586e9ec96740a49e6a5 504 SMART SM00267 330 491 8.3E-57 T 11-10-2018 IPR000160 GGDEF domain TVD_03805 f55174abe5234586e9ec96740a49e6a5 504 Gene3D G3DSA:3.30.70.270 327 491 1.9E-54 T 11-10-2018 TVD_03805 f55174abe5234586e9ec96740a49e6a5 504 SUPERFAMILY SSF55073 346 490 1.18E-45 T 11-10-2018 IPR029787 Nucleotide cyclase TVD_07310 c4150484aa006201cc0383747f8d87fc 286 Gene3D G3DSA:3.40.190.10 92 209 4.3E-11 T 11-10-2018 TVD_07310 c4150484aa006201cc0383747f8d87fc 286 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 14 259 2.7E-28 T 11-10-2018 TVD_07310 c4150484aa006201cc0383747f8d87fc 286 Gene3D G3DSA:3.40.190.10 14 223 4.3E-11 T 11-10-2018 TVD_07310 c4150484aa006201cc0383747f8d87fc 286 SUPERFAMILY SSF53850 30 179 2.8E-10 T 11-10-2018 TVD_06910 cd5780cf13d9f12480bb97a5167a8f8e 236 SMART SM00382 37 232 2.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain TVD_06910 cd5780cf13d9f12480bb97a5167a8f8e 236 Pfam PF00005 ABC transporter 28 180 4.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TVD_06910 cd5780cf13d9f12480bb97a5167a8f8e 236 SUPERFAMILY SSF52540 8 235 9.18E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_06910 cd5780cf13d9f12480bb97a5167a8f8e 236 Gene3D G3DSA:3.40.50.300 6 236 1.3E-62 T 11-10-2018 TVD_06910 cd5780cf13d9f12480bb97a5167a8f8e 236 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TVD_00480 bb5444a934bfa11af4dce9450acf6317 321 SUPERFAMILY SSF88713 41 294 5.19E-34 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TVD_00480 bb5444a934bfa11af4dce9450acf6317 321 Pfam PF01522 Polysaccharide deacetylase 71 273 8.4E-29 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 TVD_01550 4cfcbd232901407599a3119aece19ab8 130 Pfam PF12616 Protein of unknown function (DUF3775) 57 126 1.5E-19 T 11-10-2018 IPR022254 Protein of unknown function DUF3775 TVD_12095 baf0864c62b69ba701f12787d59feda7 221 Pfam PF03550 Outer membrane lipoprotein LolB 62 213 8.2E-33 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 TVD_12095 baf0864c62b69ba701f12787d59feda7 221 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 28 214 1.0E-30 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 TVD_12095 baf0864c62b69ba701f12787d59feda7 221 SUPERFAMILY SSF89392 48 215 1.06E-31 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX TVD_12095 baf0864c62b69ba701f12787d59feda7 221 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 11 215 19.776 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 TVD_12095 baf0864c62b69ba701f12787d59feda7 221 Gene3D G3DSA:2.50.20.10 42 215 7.3E-38 T 11-10-2018 TVD_02670 1450f1e40d66835e64a407395bb1a2de 77 SUPERFAMILY SSF47598 3 43 3.56E-6 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TVD_02865 60e686eb841192d0a7e76ad974b808e3 114 SUPERFAMILY SSF141371 5 103 1.06E-8 T 11-10-2018 TVD_02865 60e686eb841192d0a7e76ad974b808e3 114 Gene3D G3DSA:2.40.10.220 2 110 6.3E-7 T 11-10-2018 TVD_12315 8b19a2f8b1be66dcf6b184b9c40cad0e 113 Gene3D G3DSA:3.30.70.120 1 112 7.9E-37 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TVD_12315 8b19a2f8b1be66dcf6b184b9c40cad0e 113 Pfam PF03091 CutA1 divalent ion tolerance protein 14 110 1.6E-34 T 11-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 TVD_12315 8b19a2f8b1be66dcf6b184b9c40cad0e 113 SUPERFAMILY SSF54913 11 112 4.08E-36 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta TVD_03370 f01d79e4c7007bb1cfc857784167bee5 223 SUPERFAMILY SSF89392 39 221 2.47E-42 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX TVD_03370 f01d79e4c7007bb1cfc857784167bee5 223 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 26 220 4.4E-26 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 TVD_03370 f01d79e4c7007bb1cfc857784167bee5 223 Gene3D G3DSA:2.50.20.10 39 222 2.9E-47 T 11-10-2018 TVD_03370 f01d79e4c7007bb1cfc857784167bee5 223 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 49 213 7.2E-39 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like TVD_03370 f01d79e4c7007bb1cfc857784167bee5 223 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 20 223 27.331 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 TVD_10890 7d7a87fa54fd0c98fec55590f5af41d1 394 Pfam PF13393 Histidyl-tRNA synthetase 12 325 1.9E-118 T 11-10-2018 TVD_10890 7d7a87fa54fd0c98fec55590f5af41d1 394 PIRSF PIRSF001549 6 372 2.9E-41 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 TVD_10890 7d7a87fa54fd0c98fec55590f5af41d1 394 SUPERFAMILY SSF55681 7 324 4.98E-55 T 11-10-2018 TVD_10890 7d7a87fa54fd0c98fec55590f5af41d1 394 Gene3D G3DSA:3.30.930.10 5 331 1.4E-67 T 11-10-2018 TVD_10890 7d7a87fa54fd0c98fec55590f5af41d1 394 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 376 30.466 T 11-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 TVD_03485 c6a24e581d6b8724d4c331e5d7e8d09a 92 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 1 79 4.8E-26 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 TVD_03485 c6a24e581d6b8724d4c331e5d7e8d09a 92 Pfam PF01381 Helix-turn-helix 18 56 4.6E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TVD_03485 c6a24e581d6b8724d4c331e5d7e8d09a 92 SUPERFAMILY SSF47413 6 86 9.7E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 TVD_03485 c6a24e581d6b8724d4c331e5d7e8d09a 92 Gene3D G3DSA:1.10.260.40 1 80 4.0E-25 T 11-10-2018 TVD_02015 f11b5fc6508e5f433b73ff5b012cc020 389 SUPERFAMILY SSF55729 18 163 4.8E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_02015 f11b5fc6508e5f433b73ff5b012cc020 389 Pfam PF00583 Acetyltransferase (GNAT) family 49 140 3.6E-14 T 11-10-2018 IPR000182 GNAT domain TVD_02015 f11b5fc6508e5f433b73ff5b012cc020 389 Pfam PF11814 Peptidase_C39 like family 175 378 1.7E-86 T 11-10-2018 IPR021770 Protein of unknown function DUF3335 TVD_02015 f11b5fc6508e5f433b73ff5b012cc020 389 Gene3D G3DSA:3.40.630.30 14 164 1.8E-32 T 11-10-2018 TVD_07720 752a095ed8db68c5b6193c22e3d5e8f5 58 Gene3D G3DSA:1.10.1470.10 1 58 3.1E-13 T 11-10-2018 IPR036629 YjbJ superfamily TVD_07720 752a095ed8db68c5b6193c22e3d5e8f5 58 Pfam PF05532 CsbD-like 4 56 7.3E-15 T 11-10-2018 IPR008462 CsbD-like domain TVD_07720 752a095ed8db68c5b6193c22e3d5e8f5 58 SUPERFAMILY SSF69047 1 56 6.41E-14 T 11-10-2018 IPR036629 YjbJ superfamily TVD_11075 cd688cfda538e0b8f861a8175ab40377 750 Pfam PF04453 Organic solvent tolerance protein 301 669 1.4E-87 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 TVD_11075 cd688cfda538e0b8f861a8175ab40377 750 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 20 730 18.762 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 TVD_13425 c64469df4f8ef50838f4f7764f1ec40e 343 Gene3D G3DSA:3.30.565.10 204 336 1.2E-10 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_13425 c64469df4f8ef50838f4f7764f1ec40e 343 SUPERFAMILY SSF55874 211 336 3.18E-9 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily TVD_13425 c64469df4f8ef50838f4f7764f1ec40e 343 Pfam PF06580 Histidine kinase 154 228 5.3E-21 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 TVD_07370 7862f0351a2052bce7912fb97f85bdad 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 100 111 2.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_07370 7862f0351a2052bce7912fb97f85bdad 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 211 2.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_07370 7862f0351a2052bce7912fb97f85bdad 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 2.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_07370 7862f0351a2052bce7912fb97f85bdad 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 2.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_07370 7862f0351a2052bce7912fb97f85bdad 262 SUPERFAMILY SSF51735 19 253 1.63E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_07370 7862f0351a2052bce7912fb97f85bdad 262 Pfam PF00106 short chain dehydrogenase 23 213 1.9E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR TVD_07370 7862f0351a2052bce7912fb97f85bdad 262 Gene3D G3DSA:3.40.50.720 10 255 4.0E-49 T 11-10-2018 TVD_10045 c7cfe7c9a4b1e0aab3d5b795b3c800c1 457 PIRSF PIRSF036542 1 207 2.9E-60 T 11-10-2018 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB TVD_10045 c7cfe7c9a4b1e0aab3d5b795b3c800c1 457 PIRSF PIRSF036542 261 457 4.0E-52 T 11-10-2018 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB TVD_10045 c7cfe7c9a4b1e0aab3d5b795b3c800c1 457 Pfam PF07670 Nucleoside recognition 50 156 4.8E-9 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 TVD_10045 c7cfe7c9a4b1e0aab3d5b795b3c800c1 457 Pfam PF07670 Nucleoside recognition 325 427 3.9E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 TVD_01360 ad2b88254edd770b2b25fd8dd2a3c724 246 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 26 129 1.7E-29 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 TVD_01360 ad2b88254edd770b2b25fd8dd2a3c724 246 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 246 4.7E-51 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 TVD_07590 2c9b05a5b955db2d4bd4a37dc51f2236 166 Pfam PF05239 PRC-barrel domain 79 151 1.1E-7 T 11-10-2018 IPR027275 PRC-barrel domain TVD_07590 2c9b05a5b955db2d4bd4a37dc51f2236 166 SUPERFAMILY SSF50346 79 140 2.88E-9 T 11-10-2018 IPR011033 PRC-barrel-like superfamily TVD_07590 2c9b05a5b955db2d4bd4a37dc51f2236 166 Gene3D G3DSA:2.30.30.240 69 161 5.6E-19 T 11-10-2018 TVD_07765 a24327216cf6b77db441b60faaaee8a6 397 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 395 3.3E-180 T 11-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 TVD_07765 a24327216cf6b77db441b60faaaee8a6 397 Gene3D G3DSA:3.40.640.10 43 290 1.6E-119 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_07765 a24327216cf6b77db441b60faaaee8a6 397 Pfam PF00155 Aminotransferase class I and II 31 369 2.1E-43 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TVD_07765 a24327216cf6b77db441b60faaaee8a6 397 Gene3D G3DSA:3.90.1150.10 13 381 1.6E-119 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_07765 a24327216cf6b77db441b60faaaee8a6 397 SUPERFAMILY SSF53383 2 395 1.33E-90 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_03385 e3f73cfb153fa66d28e0c017a65903cd 185 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 4.0E-19 T 11-10-2018 IPR001727 Gdt1 family TVD_03385 e3f73cfb153fa66d28e0c017a65903cd 185 Pfam PF01169 Uncharacterized protein family UPF0016 102 177 1.8E-20 T 11-10-2018 IPR001727 Gdt1 family TVD_01055 d97ce19236407e1b80cbd975f5fce94c 150 Pfam PF03625 Domain of unknown function DUF302 68 116 3.8E-5 T 11-10-2018 IPR005180 Domain of unknown function DUF302 TVD_01055 d97ce19236407e1b80cbd975f5fce94c 150 SUPERFAMILY SSF103247 35 145 3.53E-11 T 11-10-2018 IPR035923 TT1751-like domain superfamily TVD_01055 d97ce19236407e1b80cbd975f5fce94c 150 Gene3D G3DSA:3.30.310.70 59 146 2.5E-8 T 11-10-2018 IPR035923 TT1751-like domain superfamily TVD_01405 fb4ff47cba7e5ce4c1f4c953067376ca 268 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 241 263 0.0023 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain TVD_05420 e66526df34224b2d7b0a81e94d92dfd4 137 Pfam PF04134 Protein of unknown function, DUF393 18 125 3.5E-26 T 11-10-2018 IPR007263 Protein of unknown function DUF393 TVD_09330 e7a408e1ae58183133e7f2427a00ec62 494 Pfam PF00361 Proton-conducting membrane transporter 137 412 3.6E-46 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_09330 e7a408e1ae58183133e7f2427a00ec62 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 242 266 3.6E-8 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_09330 e7a408e1ae58183133e7f2427a00ec62 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 143 162 3.6E-8 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_09330 e7a408e1ae58183133e7f2427a00ec62 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 385 411 3.6E-8 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_09330 e7a408e1ae58183133e7f2427a00ec62 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 173 197 3.6E-8 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_09330 e7a408e1ae58183133e7f2427a00ec62 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 333 352 3.6E-8 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_12425 666bc7ff0f1794c39d388d5d36315b1b 479 Gene3D G3DSA:3.30.590.20 40 465 6.1E-55 T 11-10-2018 TVD_12425 666bc7ff0f1794c39d388d5d36315b1b 479 SUPERFAMILY SSF55931 41 455 1.18E-46 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 TVD_12425 666bc7ff0f1794c39d388d5d36315b1b 479 PIRSF PIRSF012666 1 479 7.1E-126 T 11-10-2018 IPR016602 Uncharacterised conserved protein UCP012666 TVD_08195 ddb6838f0f0977007349b126dab82042 659 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 282 288 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TVD_08195 ddb6838f0f0977007349b126dab82042 659 SUPERFAMILY SSF53335 8 539 2.96E-118 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_08195 ddb6838f0f0977007349b126dab82042 659 Pfam PF12161 HsdM N-terminal domain 11 140 8.7E-22 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain TVD_08195 ddb6838f0f0977007349b126dab82042 659 Pfam PF02384 N-6 DNA Methylase 155 452 4.0E-59 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 TVD_08195 ddb6838f0f0977007349b126dab82042 659 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 175 191 8.5E-11 T 11-10-2018 TVD_08195 ddb6838f0f0977007349b126dab82042 659 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 279 291 8.5E-11 T 11-10-2018 TVD_08195 ddb6838f0f0977007349b126dab82042 659 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 207 221 8.5E-11 T 11-10-2018 TVD_08195 ddb6838f0f0977007349b126dab82042 659 Gene3D G3DSA:3.40.50.150 154 467 2.2E-92 T 11-10-2018 TVD_01645 f08a47f39d9b240827536da006b33042 272 Pfam PF01203 Type II secretion system (T2SS), protein N 58 266 7.0E-26 T 11-10-2018 IPR022792 Type II secretion system, protein N TVD_03060 c73912aff8a9d591b1e91ff85001ef2d 125 Pfam PF02635 DsrE/DsrF-like family 9 99 1.1E-9 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_03060 c73912aff8a9d591b1e91ff85001ef2d 125 Gene3D G3DSA:3.40.1260.10 1 125 1.4E-25 T 11-10-2018 IPR027396 DsrEFH-like TVD_03060 c73912aff8a9d591b1e91ff85001ef2d 125 SUPERFAMILY SSF75169 7 101 7.06E-13 T 11-10-2018 IPR027396 DsrEFH-like TVD_03765 34a778824dde864690c54899b173fff6 307 SUPERFAMILY SSF53474 6 283 7.24E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_03765 34a778824dde864690c54899b173fff6 307 Pfam PF12146 Serine aminopeptidase, S33 23 265 4.9E-49 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 TVD_03765 34a778824dde864690c54899b173fff6 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 1.7E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TVD_03765 34a778824dde864690c54899b173fff6 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 1.7E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TVD_03765 34a778824dde864690c54899b173fff6 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 221 235 1.7E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TVD_03765 34a778824dde864690c54899b173fff6 307 Gene3D G3DSA:3.40.50.1820 2 285 2.9E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_09165 5035e0a6acea72068146fc09ba612552 208 Gene3D G3DSA:1.10.530.10 36 192 8.5E-11 T 11-10-2018 TVD_09165 5035e0a6acea72068146fc09ba612552 208 SUPERFAMILY SSF53955 21 167 1.01E-16 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily TVD_05605 59c71f94d8c74e3a9188fd72c8f7fd5f 187 Pfam PF06271 RDD family 44 177 1.0E-27 T 11-10-2018 IPR010432 RDD TVD_09020 6e6b769182b0524e4fed2a8d35426176 511 Pfam PF02652 L-lactate permease 6 508 8.3E-88 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 TVD_04415 1818a7f9961d9a704bd4cf853f434116 531 Gene3D G3DSA:3.40.720.10 217 486 9.7E-16 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 TVD_04415 1818a7f9961d9a704bd4cf853f434116 531 SUPERFAMILY SSF53649 220 480 8.07E-12 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 TVD_13110 f17119da0542cd7ea7f6905fbefce148 121 Gene3D G3DSA:3.30.2020.30 1 99 6.0E-31 T 11-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 TVD_13110 f17119da0542cd7ea7f6905fbefce148 121 Pfam PF06155 Protein of unknown function (DUF971) 10 94 3.3E-31 T 11-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 TVD_12935 e3ce03f7b25c0e2a5a8fff785b99c2d2 162 SUPERFAMILY SSF52402 3 143 4.6E-29 T 11-10-2018 TVD_12935 e3ce03f7b25c0e2a5a8fff785b99c2d2 162 Gene3D G3DSA:3.40.50.620 1 154 3.1E-29 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TVD_12935 e3ce03f7b25c0e2a5a8fff785b99c2d2 162 PRINTS PR01438 Universal stress protein signature 103 115 5.0E-16 T 11-10-2018 IPR006015 Universal stress protein A TVD_12935 e3ce03f7b25c0e2a5a8fff785b99c2d2 162 PRINTS PR01438 Universal stress protein signature 121 143 5.0E-16 T 11-10-2018 IPR006015 Universal stress protein A TVD_12935 e3ce03f7b25c0e2a5a8fff785b99c2d2 162 PRINTS PR01438 Universal stress protein signature 2 20 5.0E-16 T 11-10-2018 IPR006015 Universal stress protein A TVD_12935 e3ce03f7b25c0e2a5a8fff785b99c2d2 162 Pfam PF00582 Universal stress protein family 1 143 8.3E-26 T 11-10-2018 IPR006016 UspA TVD_00560 191c8cd5a7d246450c64d4b04f0cc423 144 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 75 8.1E-11 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain TVD_00560 191c8cd5a7d246450c64d4b04f0cc423 144 Gene3D G3DSA:3.10.50.40 3 144 9.8E-34 T 11-10-2018 TVD_00560 191c8cd5a7d246450c64d4b04f0cc423 144 SUPERFAMILY SSF54534 4 140 3.54E-29 T 11-10-2018 TVD_02500 c7cf6c1dd874e9fc9a52072a9a1d6af4 161 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 161 1.9E-51 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TVD_02500 c7cf6c1dd874e9fc9a52072a9a1d6af4 161 Gene3D G3DSA:2.40.50.140 1 118 4.7E-47 T 11-10-2018 TVD_02500 c7cf6c1dd874e9fc9a52072a9a1d6af4 161 SUPERFAMILY SSF50249 3 161 6.51E-57 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold TVD_02500 c7cf6c1dd874e9fc9a52072a9a1d6af4 161 Pfam PF00436 Single-strand binding protein family 5 108 2.9E-42 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 TVD_02500 c7cf6c1dd874e9fc9a52072a9a1d6af4 161 Hamap MF_00984 Single-stranded DNA-binding protein. 5 113 37.291 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 TVD_00280 da40338c7d468bc2948b849b20ecaa99 271 Gene3D G3DSA:2.50.20.10 27 261 1.1E-64 T 11-10-2018 TVD_00280 da40338c7d468bc2948b849b20ecaa99 271 Pfam PF17131 Outer membrane lipoprotein-sorting protein 80 261 2.5E-54 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein TVD_04770 eee871ee80d2207d19f7d69aa8be687b 371 Gene3D G3DSA:2.40.160.10 30 297 1.2E-20 T 11-10-2018 IPR023614 Porin domain superfamily TVD_04770 eee871ee80d2207d19f7d69aa8be687b 371 Pfam PF07396 Phosphate-selective porin O and P 62 203 4.3E-12 T 11-10-2018 IPR010870 Phosphate-selective porin O/P TVD_04770 eee871ee80d2207d19f7d69aa8be687b 371 SUPERFAMILY SSF56935 39 340 4.67E-9 T 11-10-2018 TVD_05860 ccee90806dffe9e786f33c5d9711580b 209 Gene3D G3DSA:3.30.70.1070 127 203 2.6E-8 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TVD_05860 ccee90806dffe9e786f33c5d9711580b 209 Pfam PF05036 Sporulation related domain 129 189 1.7E-9 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 TVD_05860 ccee90806dffe9e786f33c5d9711580b 209 SUPERFAMILY SSF110997 126 203 4.18E-11 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TVD_00435 29d8baba105a9f4fbb377de6bd4d397b 336 SUPERFAMILY SSF53448 7 235 7.03E-25 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_00435 29d8baba105a9f4fbb377de6bd4d397b 336 Gene3D G3DSA:3.90.550.10 2 140 5.4E-20 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_00435 29d8baba105a9f4fbb377de6bd4d397b 336 Pfam PF00535 Glycosyl transferase family 2 10 140 6.5E-21 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 TVD_01350 20ce363b54b05ac8e14185e6b25f621a 341 Pfam PF12224 Putative amidoligase enzyme 28 299 4.5E-58 T 11-10-2018 IPR022025 Putative amidoligase enzyme TVD_05380 090822972868ac7625f3e4a9dabd4c33 491 Gene3D G3DSA:3.20.20.80 12 490 2.0E-172 T 11-10-2018 TVD_05380 090822972868ac7625f3e4a9dabd4c33 491 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 104 489 1.4E-74 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 TVD_05380 090822972868ac7625f3e4a9dabd4c33 491 SUPERFAMILY SSF51445 14 486 2.32E-153 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily TVD_05380 090822972868ac7625f3e4a9dabd4c33 491 Pfam PF02446 4-alpha-glucanotransferase 21 467 1.1E-138 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 TVD_11855 4f87cdb191b09a9da9ee4d6edd300b95 158 SUPERFAMILY SSF52833 5 155 6.42E-45 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_11855 4f87cdb191b09a9da9ee4d6edd300b95 158 Pfam PF00578 AhpC/TSA family 12 134 2.3E-30 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TVD_11855 4f87cdb191b09a9da9ee4d6edd300b95 158 Gene3D G3DSA:3.40.30.10 3 155 4.3E-44 T 11-10-2018 TVD_11855 4f87cdb191b09a9da9ee4d6edd300b95 158 PIRSF PIRSF000239 1 157 9.4E-24 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TVD_05110 db0236fde062a68b86da3b89e2a83fd5 234 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 3 224 8.6E-105 T 11-10-2018 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 TVD_05110 db0236fde062a68b86da3b89e2a83fd5 234 Pfam PF02348 Cytidylyltransferase 3 177 3.7E-36 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 TVD_05110 db0236fde062a68b86da3b89e2a83fd5 234 SUPERFAMILY SSF53448 3 227 3.99E-63 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_05110 db0236fde062a68b86da3b89e2a83fd5 234 Gene3D G3DSA:3.90.550.10 2 226 1.1E-70 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_12880 820f25c84811c9b3dc985cc23aa9e103 399 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 83 325 1.1E-48 T 11-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 TVD_12880 820f25c84811c9b3dc985cc23aa9e103 399 Gene3D G3DSA:3.40.50.12710 10 395 2.7E-113 T 11-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 TVD_12880 820f25c84811c9b3dc985cc23aa9e103 399 SUPERFAMILY SSF53335 29 385 1.16E-85 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_07055 3f4df7a7debb9ab0178bb96bccf51fb5 208 Pfam PF04893 Yip1 domain 27 181 4.3E-9 T 11-10-2018 IPR006977 Yip1 domain GO:0016020 TVD_11390 d485065a5de6dbe5ae2ad4ff34e6c21b 120 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 108 24.509 T 11-10-2018 IPR026592 Outer membrane protein assembly factor BamE TVD_11390 d485065a5de6dbe5ae2ad4ff34e6c21b 120 Pfam PF04355 SmpA / OmlA family 31 97 8.1E-22 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 TVD_11390 d485065a5de6dbe5ae2ad4ff34e6c21b 120 Gene3D G3DSA:3.30.1450.10 30 116 9.4E-25 T 11-10-2018 IPR037873 BamE-like TVD_11940 ab17d7f77f8bb8f0e2ebb81289915f6a 171 Pfam PF00578 AhpC/TSA family 36 151 3.6E-26 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 TVD_11940 ab17d7f77f8bb8f0e2ebb81289915f6a 171 SUPERFAMILY SSF52833 36 170 3.9E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_11940 ab17d7f77f8bb8f0e2ebb81289915f6a 171 Gene3D G3DSA:3.40.30.10 29 171 4.4E-40 T 11-10-2018 TVD_08570 e8c5c3395433208a2b918024bbb0ed6a 200 Gene3D G3DSA:3.40.50.150 1 199 4.8E-54 T 11-10-2018 TVD_08570 e8c5c3395433208a2b918024bbb0ed6a 200 SUPERFAMILY SSF53335 2 175 7.16E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_08570 e8c5c3395433208a2b918024bbb0ed6a 200 Pfam PF13649 Methyltransferase domain 34 125 9.8E-14 T 11-10-2018 TVD_08385 d0dade04964213f3c904b7fc95f93c03 277 SUPERFAMILY SSF51556 28 274 4.89E-13 T 11-10-2018 IPR032466 Metal-dependent hydrolase TVD_08385 d0dade04964213f3c904b7fc95f93c03 277 Pfam PF04909 Amidohydrolase 129 275 1.3E-6 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 TVD_08385 d0dade04964213f3c904b7fc95f93c03 277 Gene3D G3DSA:3.20.20.140 35 275 4.5E-20 T 11-10-2018 TVD_00700 3540e24258091601ac8e3fec06d30819 189 Gene3D G3DSA:3.40.50.850 3 189 4.1E-52 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TVD_00700 3540e24258091601ac8e3fec06d30819 189 SUPERFAMILY SSF52499 12 189 1.44E-45 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 TVD_00700 3540e24258091601ac8e3fec06d30819 189 Pfam PF00857 Isochorismatase family 19 166 6.7E-27 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 TVD_04135 126089b08c6f51bb61bfd6ae1b890004 119 Gene3D G3DSA:1.10.3830.10 4 119 4.0E-38 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 TVD_04135 126089b08c6f51bb61bfd6ae1b890004 119 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 118 3.7E-34 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 TVD_07940 2896c39c8dfdf5fb5b861509dcbe8f94 238 Pfam PF07317 Flagellar regulator YcgR 6 112 1.5E-19 T 11-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal TVD_07940 2896c39c8dfdf5fb5b861509dcbe8f94 238 Gene3D G3DSA:2.40.10.220 115 231 5.2E-11 T 11-10-2018 TVD_07940 2896c39c8dfdf5fb5b861509dcbe8f94 238 Gene3D G3DSA:2.30.110.10 4 114 6.8E-17 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 TVD_05775 3ae70e4a9025ec8de11ee4d84f1b6b27 654 Gene3D G3DSA:1.10.390.60 199 423 4.8E-21 T 11-10-2018 TVD_05775 3ae70e4a9025ec8de11ee4d84f1b6b27 654 SUPERFAMILY SSF55486 202 428 1.68E-30 T 11-10-2018 TVD_03225 b09d7db0902d4286fd5b91df49609714 77 Pfam PF11381 Protein of unknown function (DUF3185) 11 67 1.0E-18 T 11-10-2018 IPR021521 Protein of unknown function DUF3185 TVD_13465 8ac768b66152d1817a47366e679e996c 255 SUPERFAMILY SSF56219 2 254 8.9E-79 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TVD_13465 8ac768b66152d1817a47366e679e996c 255 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 210 221 - T 11-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 TVD_13465 8ac768b66152d1817a47366e679e996c 255 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 5.4E-78 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 TVD_13465 8ac768b66152d1817a47366e679e996c 255 Gene3D G3DSA:3.60.10.10 1 254 8.3E-74 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily TVD_13465 8ac768b66152d1817a47366e679e996c 255 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 253 1.9E-82 T 11-10-2018 TVD_13465 8ac768b66152d1817a47366e679e996c 255 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 246 1.8E-23 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase TVD_01370 95251a247ba2e161b0292535ee7c4d4f 417 SUPERFAMILY SSF111352 12 391 1.44E-102 T 11-10-2018 TVD_01370 95251a247ba2e161b0292535ee7c4d4f 417 Gene3D G3DSA:1.10.3430.10 2 417 3.7E-118 T 11-10-2018 IPR029020 Ammonium/urea transporter TVD_01370 95251a247ba2e161b0292535ee7c4d4f 417 ProSitePatterns PS01219 Ammonium transporters signature. 171 196 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 TVD_01370 95251a247ba2e161b0292535ee7c4d4f 417 Pfam PF00909 Ammonium Transporter Family 19 410 3.4E-96 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 TVD_01370 95251a247ba2e161b0292535ee7c4d4f 417 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 413 3.5E-200 T 11-10-2018 IPR019879 Ammonium transporter, marine subtype TVD_05535 07f7dab9f0d137f59c2ae2379042b190 199 SUPERFAMILY SSF110997 123 196 1.1E-15 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TVD_05535 07f7dab9f0d137f59c2ae2379042b190 199 Pfam PF05036 Sporulation related domain 123 196 7.4E-15 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 TVD_05535 07f7dab9f0d137f59c2ae2379042b190 199 Gene3D G3DSA:3.30.70.1070 124 197 5.5E-12 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 TVD_05460 ee6678994efe8fa5f7601c3411818a24 93 SUPERFAMILY SSF47598 1 44 4.0E-9 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 TVD_05460 ee6678994efe8fa5f7601c3411818a24 93 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 81 3.6E-13 T 11-10-2018 IPR022789 Antitoxin ParD TVD_05460 ee6678994efe8fa5f7601c3411818a24 93 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 3 69 5.1E-19 T 11-10-2018 IPR022789 Antitoxin ParD TVD_05460 ee6678994efe8fa5f7601c3411818a24 93 Gene3D G3DSA:1.10.8.1250 10 93 4.0E-18 T 11-10-2018 IPR038296 Antitoxin ParD superfamily TVD_03870 dbc2a58e178dfc0299a094dfe36ecf29 205 SUPERFAMILY SSF53335 4 194 1.3E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_03870 dbc2a58e178dfc0299a094dfe36ecf29 205 Gene3D G3DSA:3.40.50.150 5 195 2.4E-25 T 11-10-2018 TVD_03870 dbc2a58e178dfc0299a094dfe36ecf29 205 Pfam PF13649 Methyltransferase domain 44 140 3.3E-13 T 11-10-2018 TVD_10155 9a04b78b20fd39c29d9da27836215fdd 249 Pfam PF11306 Protein of unknown function (DUF3108) 11 236 7.9E-34 T 11-10-2018 IPR021457 Protein of unknown function DUF3108 TVD_08545 0b8d1bbee16e33628044aafa1544d4f6 65 SUPERFAMILY SSF57829 2 55 1.71E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 TVD_08545 0b8d1bbee16e33628044aafa1544d4f6 65 Pfam PF01783 Ribosomal L32p protein family 2 55 9.2E-21 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_08545 0b8d1bbee16e33628044aafa1544d4f6 65 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 4.2E-19 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_08545 0b8d1bbee16e33628044aafa1544d4f6 65 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.941 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_12335 665947ca8e5b176ee8d2438dd71008bf 184 Gene3D G3DSA:3.40.50.2020 41 184 4.1E-20 T 11-10-2018 TVD_12335 665947ca8e5b176ee8d2438dd71008bf 184 Pfam PF00156 Phosphoribosyl transferase domain 94 182 2.5E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 TVD_12335 665947ca8e5b176ee8d2438dd71008bf 184 SUPERFAMILY SSF53271 5 182 1.7E-33 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like TVD_08655 e6a708123eca7a0fcfba01bb5857a694 71 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 61 5.2E-6 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 TVD_00130 26730d19cc79b01e173bbf30af903a9b 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 1.4E-35 T 11-10-2018 IPR013551 Domain of unknown function DUF1732 TVD_00130 26730d19cc79b01e173bbf30af903a9b 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 1.1E-86 T 11-10-2018 IPR005229 Conserved hypothetical protein CHP00255 TVD_00130 26730d19cc79b01e173bbf30af903a9b 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 5.3E-38 T 11-10-2018 IPR013527 YicC-like, N-terminal TVD_06585 fbafee3f66dc34fdd8df35eb3821acc0 297 PIRSF PIRSF000018 3 297 1.0E-92 T 11-10-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 TVD_06585 fbafee3f66dc34fdd8df35eb3821acc0 297 SUPERFAMILY SSF46626 30 135 3.54E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_06585 fbafee3f66dc34fdd8df35eb3821acc0 297 Gene3D G3DSA:1.10.760.10 1 141 1.4E-11 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_06585 fbafee3f66dc34fdd8df35eb3821acc0 297 Gene3D G3DSA:1.10.760.10 165 295 4.3E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_06585 fbafee3f66dc34fdd8df35eb3821acc0 297 SUPERFAMILY SSF46626 181 289 5.81E-15 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_09655 a4d8ba5785c8d5c1cb105041e9ae6ed5 455 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 436 2.9E-18 T 11-10-2018 IPR010352 Protein of unknown function DUF945 TVD_09880 931291deea511dbd60f8e4ef6a0d9710 259 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 130 152 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TVD_09880 931291deea511dbd60f8e4ef6a0d9710 259 Pfam PF01066 CDP-alcohol phosphatidyltransferase 83 151 8.0E-9 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TVD_09880 931291deea511dbd60f8e4ef6a0d9710 259 Gene3D G3DSA:1.20.120.1760 80 244 3.4E-10 T 11-10-2018 TVD_09355 f00b48a863b02418a599094a9e21903e 320 Gene3D G3DSA:1.20.58.1130 8 206 2.4E-84 T 11-10-2018 TVD_09355 f00b48a863b02418a599094a9e21903e 320 Pfam PF01699 Sodium/calcium exchanger protein 4 141 1.5E-20 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 TVD_09355 f00b48a863b02418a599094a9e21903e 320 Pfam PF01699 Sodium/calcium exchanger protein 175 315 5.5E-31 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 TVD_09355 f00b48a863b02418a599094a9e21903e 320 Gene3D G3DSA:1.20.1420.30 34 307 2.4E-84 T 11-10-2018 TVD_09355 f00b48a863b02418a599094a9e21903e 320 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 310 5.8E-71 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 TVD_09065 17698254723a921d562783a4abc0ee59 158 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 25 157 9.1E-15 T 11-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 TVD_09065 17698254723a921d562783a4abc0ee59 158 Gene3D G3DSA:3.10.450.50 24 158 1.1E-28 T 11-10-2018 TVD_09065 17698254723a921d562783a4abc0ee59 158 SUPERFAMILY SSF54427 24 158 2.72E-22 T 11-10-2018 IPR032710 NTF2-like domain superfamily TVD_09065 17698254723a921d562783a4abc0ee59 158 Pfam PF14534 Domain of unknown function (DUF4440) 29 148 6.2E-15 T 11-10-2018 IPR027843 Domain of unknown function DUF4440 TVD_12200 b83a3dfc3829d2b43d2c9f5855fe6969 330 Pfam PF06258 Mitochondrial fission ELM1 14 315 5.3E-98 T 11-10-2018 IPR009367 Mitochondrial fission protein ELM1-like TVD_08005 05ba27656c52eebf7f09de7625693530 256 Pfam PF09836 Putative DNA-binding domain 8 94 2.6E-24 T 11-10-2018 IPR018640 Putative DNA-binding domain, bacteria TVD_08005 05ba27656c52eebf7f09de7625693530 256 Gene3D G3DSA:1.10.150.690 34 124 6.9E-25 T 11-10-2018 TVD_00895 a4b13f9ebbbd871e94f6c7d707f31a1b 130 Pfam PF03703 Bacterial PH domain 47 121 1.8E-15 T 11-10-2018 IPR005182 Domain of unknown function DUF304 TVD_00535 83635d6f4dda9d432157d2050b3c6480 321 Gene3D G3DSA:3.10.129.10 10 134 2.5E-5 T 11-10-2018 TVD_09735 42bc5a17f464e10734805bb24df84ffb 284 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 3 282 1.6E-119 T 11-10-2018 IPR022522 Flagellar motor stator, MotA TVD_09735 42bc5a17f464e10734805bb24df84ffb 284 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 237 3.2E-9 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TVD_10440 cd39706639a358ac44d81972f97728ab 153 Gene3D G3DSA:1.10.760.10 23 148 9.3E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_10440 cd39706639a358ac44d81972f97728ab 153 SUPERFAMILY SSF46626 50 147 1.51E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_10440 cd39706639a358ac44d81972f97728ab 153 Pfam PF00034 Cytochrome c 65 145 6.0E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_07020 de2fc403afdce075214d85eba753f38d 455 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 215 434 2.4E-39 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 TVD_07020 de2fc403afdce075214d85eba753f38d 455 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 105 4.7E-16 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 TVD_07020 de2fc403afdce075214d85eba753f38d 455 Pfam PF07196 Flagellin hook IN motif 126 178 5.2E-11 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 TVD_02565 46667147e0c0e2ae3bdfa3d9b04bcb60 130 SUPERFAMILY SSF81301 1 113 1.59E-40 T 11-10-2018 TVD_02565 46667147e0c0e2ae3bdfa3d9b04bcb60 130 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 25.27 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS TVD_02565 46667147e0c0e2ae3bdfa3d9b04bcb60 130 Gene3D G3DSA:3.30.460.10 1 117 9.0E-41 T 11-10-2018 TVD_02565 46667147e0c0e2ae3bdfa3d9b04bcb60 130 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 1.0E-38 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS TVD_02565 46667147e0c0e2ae3bdfa3d9b04bcb60 130 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 2.3E-28 T 11-10-2018 TVD_04205 c7a97df3589db36216b8624915b3f40f 394 SUPERFAMILY SSF53383 9 375 5.11E-105 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase TVD_04205 c7a97df3589db36216b8624915b3f40f 394 Pfam PF00266 Aminotransferase class-V 13 337 2.5E-33 T 11-10-2018 IPR000192 Aminotransferase class V domain TVD_04205 c7a97df3589db36216b8624915b3f40f 394 Gene3D G3DSA:3.40.640.10 22 269 2.4E-144 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 TVD_04205 c7a97df3589db36216b8624915b3f40f 394 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site TVD_04205 c7a97df3589db36216b8624915b3f40f 394 PIRSF PIRSF000524 4 393 2.0E-117 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 TVD_04205 c7a97df3589db36216b8624915b3f40f 394 Gene3D G3DSA:3.90.1150.10 9 371 2.4E-144 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 TVD_05090 3f3141de36abd671ca471d05e5ce6b35 535 Pfam PF01636 Phosphotransferase enzyme family 292 452 2.8E-6 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase TVD_05090 3f3141de36abd671ca471d05e5ce6b35 535 SUPERFAMILY SSF56112 290 465 5.36E-6 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily TVD_00940 b56180211a38296b157797fd57822892 404 Pfam PF01963 TraB family 20 235 2.3E-27 T 11-10-2018 IPR002816 Pheromone shutdown, TraB TVD_00940 b56180211a38296b157797fd57822892 404 TIGRFAM TIGR00261 traB: TraB family protein 21 399 1.7E-83 T 11-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal TVD_04730 710706bba4eedec5665dafb870660449 217 Gene3D G3DSA:3.40.50.10230 3 216 5.9E-78 T 11-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 TVD_04730 710706bba4eedec5665dafb870660449 217 SUPERFAMILY SSF63965 11 213 7.46E-72 T 11-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 TVD_04730 710706bba4eedec5665dafb870660449 217 Pfam PF02570 Precorrin-8X methylmutase 20 213 2.3E-68 T 11-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 TVD_00930 6a96a4fa61be0e11b34e74eaf7e01e8d 163 Pfam PF03843 Outer membrane lipoprotein Slp family 17 148 5.1E-34 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 TVD_00930 6a96a4fa61be0e11b34e74eaf7e01e8d 163 PIRSF PIRSF004982 2 152 2.0E-36 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 TVD_08045 9c99635ab43d3e4ae4c6f08d3340ec25 120 SUPERFAMILY SSF57716 87 119 4.49E-5 T 11-10-2018 TVD_08045 9c99635ab43d3e4ae4c6f08d3340ec25 120 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 86 119 7.2E-6 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 TVD_08045 9c99635ab43d3e4ae4c6f08d3340ec25 120 Gene3D G3DSA:1.20.120.910 5 120 1.2E-15 T 11-10-2018 TVD_00030 fb2065ef1312c968e7ab124a04139704 344 Gene3D G3DSA:3.20.20.100 1 344 2.5E-128 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TVD_00030 fb2065ef1312c968e7ab124a04139704 344 Pfam PF00248 Aldo/keto reductase family 16 335 2.2E-69 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain TVD_00030 fb2065ef1312c968e7ab124a04139704 344 PRINTS PR00069 Aldo-keto reductase signature 162 179 9.4E-10 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TVD_00030 fb2065ef1312c968e7ab124a04139704 344 PRINTS PR00069 Aldo-keto reductase signature 114 132 9.4E-10 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TVD_00030 fb2065ef1312c968e7ab124a04139704 344 SUPERFAMILY SSF51430 1 344 1.7E-106 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily TVD_13410 c28ee6f2a08052be7af189d3f765de41 502 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 15 470 4.8E-129 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 TVD_13410 c28ee6f2a08052be7af189d3f765de41 502 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 14 488 42.41 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 TVD_01490 dc2869a904c081be57928d8ae1c5db0c 103 Gene3D G3DSA:3.30.460.10 7 103 1.9E-20 T 11-10-2018 TVD_01490 dc2869a904c081be57928d8ae1c5db0c 103 SUPERFAMILY SSF81301 8 102 1.12E-22 T 11-10-2018 TVD_01490 dc2869a904c081be57928d8ae1c5db0c 103 Pfam PF01909 Nucleotidyltransferase domain 19 98 2.6E-12 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 TVD_00015 5e0fc7b4861d964f826d4a5c1f93542d 213 SUPERFAMILY SSF56281 37 159 4.01E-6 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_08325 03a608e49e5cf1570568f0c5f8467045 67 SUPERFAMILY SSF46955 9 58 3.48E-6 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily TVD_08325 03a608e49e5cf1570568f0c5f8467045 67 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 9 57 1.2E-14 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA TVD_05795 eb9b9cf467dab7c9453bb1c9642149df 503 Pfam PF07556 Protein of unknown function (DUF1538) 277 486 1.7E-68 T 11-10-2018 IPR011435 Protein of unknown function DUF1538 TVD_05795 eb9b9cf467dab7c9453bb1c9642149df 503 Pfam PF07556 Protein of unknown function (DUF1538) 17 227 2.3E-68 T 11-10-2018 IPR011435 Protein of unknown function DUF1538 TVD_07260 4e49664beb82f700206b94402dec019c 278 Pfam PF01148 Cytidylyltransferase family 3 263 5.9E-57 T 11-10-2018 TVD_07260 4e49664beb82f700206b94402dec019c 278 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 226 252 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 TVD_05995 be626af2adc44dfcc4fc149e3af8a805 343 Pfam PF13280 WYL domain 160 333 5.1E-35 T 11-10-2018 IPR026881 WYL domain TVD_01635 090b4f132d36e923741bd5ed89e401d2 239 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 135 225 1.1E-19 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 TVD_01635 090b4f132d36e923741bd5ed89e401d2 239 Gene3D G3DSA:2.60.120.620 36 228 3.3E-49 T 11-10-2018 TVD_01635 090b4f132d36e923741bd5ed89e401d2 239 SMART SM00702 45 225 8.3E-21 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 TVD_02710 75886b0a19942db8cdb35da829b8448f 190 Gene3D G3DSA:1.20.120.1490 71 168 8.0E-14 T 11-10-2018 TVD_02710 75886b0a19942db8cdb35da829b8448f 190 Pfam PF07813 LTXXQ motif family protein 72 163 5.8E-8 T 11-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 TVD_02895 c75e91015e531a78c61198758e958e8f 84 Pfam PF01713 Smr domain 6 83 3.3E-13 T 11-10-2018 IPR002625 Smr domain TVD_02895 c75e91015e531a78c61198758e958e8f 84 Gene3D G3DSA:3.30.1370.110 2 84 3.9E-13 T 11-10-2018 TVD_02895 c75e91015e531a78c61198758e958e8f 84 SUPERFAMILY SSF160443 6 82 2.62E-6 T 11-10-2018 IPR036063 Smr domain superfamily TVD_05400 fd7bf032b41a0b0f5dca9b9409bb5afb 228 Pfam PF04298 Putative neutral zinc metallopeptidase 5 225 2.8E-71 T 11-10-2018 IPR007395 Putative neutral zinc metallopeptidase TVD_12760 ad2c9b7066d0e459095e27a0358b2532 288 Pfam PF01435 Peptidase family M48 82 265 6.8E-33 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TVD_04335 c1a93a9219bcacaee65a0b0b4696d216 235 Pfam PF01914 MarC family integral membrane protein 6 207 1.1E-52 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 TVD_04335 c1a93a9219bcacaee65a0b0b4696d216 235 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 205 1.1E-52 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 TVD_05970 bfb198a6317390f66f765fe29bc301b2 78 Gene3D G3DSA:3.30.160.250 5 78 1.2E-11 T 11-10-2018 TVD_05970 bfb198a6317390f66f765fe29bc301b2 78 SUPERFAMILY SSF143100 5 65 3.01E-10 T 11-10-2018 IPR035069 TTHA1013/TTHA0281-like TVD_06890 0e7276a1f46a6cb52c165df7c71bfd70 305 Pfam PF04982 HPP family 51 172 4.8E-39 T 11-10-2018 IPR007065 HPP TVD_03630 7833059e32da021d9ca7766600b6828a 218 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 161 4.4E-37 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_03630 7833059e32da021d9ca7766600b6828a 218 Gene3D G3DSA:1.20.120.1200 5 163 1.7E-43 T 11-10-2018 TVD_09690 1e94cf9f9eabfdd10ff66d11359e2c27 61 Pfam PF09720 Putative addiction module component 1 54 6.3E-15 T 11-10-2018 IPR013406 Conserved hypothetical protein CHP02574, addiction module TVD_09540 6e2628fbd6f166374fe239cbce066fcc 711 Pfam PF07793 Protein of unknown function (DUF1631) 295 705 1.1E-42 T 11-10-2018 IPR012434 Protein of unknown function DUF1631 TVD_09540 6e2628fbd6f166374fe239cbce066fcc 711 Pfam PF07793 Protein of unknown function (DUF1631) 9 245 3.7E-29 T 11-10-2018 IPR012434 Protein of unknown function DUF1631 TVD_03395 e028a4a1a17869e4a30b76b124019282 118 Pfam PF02635 DsrE/DsrF-like family 1 118 1.0E-16 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_03395 e028a4a1a17869e4a30b76b124019282 118 Gene3D G3DSA:3.40.1260.10 1 118 3.0E-27 T 11-10-2018 IPR027396 DsrEFH-like TVD_03395 e028a4a1a17869e4a30b76b124019282 118 SUPERFAMILY SSF75169 1 118 2.5E-24 T 11-10-2018 IPR027396 DsrEFH-like TVD_07440 b91c73ad9a1fd1eef0705bae26a4b2a6 186 SUPERFAMILY SSF50022 46 182 4.25E-5 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TVD_07440 b91c73ad9a1fd1eef0705bae26a4b2a6 186 Gene3D G3DSA:2.102.10.10 43 184 6.8E-26 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 TVD_07080 653901ee915e4bc5152e274494939f3f 173 SUPERFAMILY SSF52540 3 169 1.63E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase TVD_07080 653901ee915e4bc5152e274494939f3f 173 PIRSF PIRSF006135 1 171 1.0E-50 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 TVD_07080 653901ee915e4bc5152e274494939f3f 173 Gene3D G3DSA:3.40.50.300 2 169 1.5E-53 T 11-10-2018 TVD_07080 653901ee915e4bc5152e274494939f3f 173 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 166 3.6E-58 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 TVD_12475 86883bb7f57be51ef6f7907849726299 142 Gene3D G3DSA:3.30.300.20 39 138 1.7E-28 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta TVD_12475 86883bb7f57be51ef6f7907849726299 142 Gene3D G3DSA:2.20.25.10 1 33 5.2E-13 T 11-10-2018 TVD_12475 86883bb7f57be51ef6f7907849726299 142 Pfam PF02566 OsmC-like protein 34 131 1.4E-16 T 11-10-2018 IPR003718 OsmC/Ohr family TVD_12475 86883bb7f57be51ef6f7907849726299 142 SUPERFAMILY SSF82784 1 137 1.31E-40 T 11-10-2018 IPR036102 OsmC/Ohr superfamily TVD_10505 2863697d01687ce53341d98a7e320681 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 6.0E-65 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 TVD_10505 2863697d01687ce53341d98a7e320681 164 Gene3D G3DSA:3.30.70.260 1 78 1.2E-36 T 11-10-2018 TVD_10505 2863697d01687ce53341d98a7e320681 164 Gene3D G3DSA:3.30.70.1150 83 164 8.0E-28 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal TVD_10505 2863697d01687ce53341d98a7e320681 164 Pfam PF13710 ACT domain 12 72 2.4E-16 T 11-10-2018 TVD_10505 2863697d01687ce53341d98a7e320681 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 6.0E-35 T 11-10-2018 TVD_10505 2863697d01687ce53341d98a7e320681 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 2.7E-27 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 TVD_10505 2863697d01687ce53341d98a7e320681 164 SUPERFAMILY SSF55021 1 74 4.31E-23 T 11-10-2018 TVD_10505 2863697d01687ce53341d98a7e320681 164 SUPERFAMILY SSF55021 80 161 1.49E-24 T 11-10-2018 TVD_12305 5b56e1c332b723426e332eae502f8df3 458 Pfam PF02321 Outer membrane efflux protein 57 239 1.3E-12 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_12305 5b56e1c332b723426e332eae502f8df3 458 Pfam PF02321 Outer membrane efflux protein 263 409 2.2E-12 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_12305 5b56e1c332b723426e332eae502f8df3 458 Gene3D G3DSA:1.20.1600.10 55 451 4.5E-39 T 11-10-2018 TVD_12305 5b56e1c332b723426e332eae502f8df3 458 SUPERFAMILY SSF56954 14 445 3.14E-43 T 11-10-2018 TVD_09280 35a3ce3a78f9e9e93fad2424255d7def 432 Gene3D G3DSA:3.30.465.10 62 187 2.5E-22 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 TVD_09280 35a3ce3a78f9e9e93fad2424255d7def 432 Pfam PF01565 FAD binding domain 31 143 3.0E-16 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TVD_09280 35a3ce3a78f9e9e93fad2424255d7def 432 SUPERFAMILY SSF56176 29 174 4.35E-30 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 TVD_05990 ea04aa28c9cb49837f174e3fbe6418ba 206 SUPERFAMILY SSF56925 24 206 5.23E-18 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel TVD_05990 ea04aa28c9cb49837f174e3fbe6418ba 206 Gene3D G3DSA:2.40.160.20 25 206 2.8E-14 T 11-10-2018 TVD_05990 ea04aa28c9cb49837f174e3fbe6418ba 206 Pfam PF13505 Outer membrane protein beta-barrel domain 8 206 3.8E-24 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel TVD_10930 8e2c29cfa076ed6eb52abdfc1150c8f4 118 Pfam PF16137 Domain of unknown function (DUF4845) 25 110 3.7E-21 T 11-10-2018 IPR032314 Protein of unknown function DUF4845 TVD_04535 b25b31178fbe9e7b8677d82d1ae24d47 209 Pfam PF07027 Protein of unknown function (DUF1318) 113 209 3.7E-17 T 11-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 TVD_01460 9715270cf050457486a393fedc1ac3e5 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 7 43 2.2E-5 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TVD_01460 9715270cf050457486a393fedc1ac3e5 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 7 49 8.3E-6 T 11-10-2018 TVD_11180 e9dc89fd3af6f59493e027861fafb0d4 227 SMART SM00849 13 193 1.5E-37 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_11180 e9dc89fd3af6f59493e027861fafb0d4 227 SUPERFAMILY SSF56281 7 209 5.69E-56 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_11180 e9dc89fd3af6f59493e027861fafb0d4 227 Gene3D G3DSA:3.60.15.10 4 211 1.4E-77 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like TVD_11180 e9dc89fd3af6f59493e027861fafb0d4 227 Pfam PF00753 Metallo-beta-lactamase superfamily 10 193 3.7E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase TVD_08835 7572ddb71aa7bc622511a460c28796de 336 SUPERFAMILY SSF51556 4 330 6.54E-90 T 11-10-2018 IPR032466 Metal-dependent hydrolase TVD_08835 7572ddb71aa7bc622511a460c28796de 336 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 326 1.9E-118 T 11-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 TVD_08835 7572ddb71aa7bc622511a460c28796de 336 Hamap MF_01962 Adenine deaminase. 4 316 85.408 T 11-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 TVD_08835 7572ddb71aa7bc622511a460c28796de 336 Pfam PF00962 Adenosine/AMP deaminase 8 325 2.7E-79 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 TVD_08835 7572ddb71aa7bc622511a460c28796de 336 Gene3D G3DSA:3.20.20.140 1 334 4.3E-108 T 11-10-2018 TVD_10680 8212e06180792e92e5d9c569f8bffe1f 151 PIRSF PIRSF002721 2 151 1.5E-37 T 11-10-2018 IPR016364 Surface antigen, Rickettsia type TVD_10680 8212e06180792e92e5d9c569f8bffe1f 151 Pfam PF16998 17 kDa outer membrane surface antigen 53 148 1.4E-7 T 11-10-2018 IPR032635 Surface antigen domain TVD_08440 07212a23ef219ea3e7ecb1f2cb83cfca 847 Pfam PF02687 FtsX-like permease family 283 378 6.9E-9 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TVD_08440 07212a23ef219ea3e7ecb1f2cb83cfca 847 Pfam PF02687 FtsX-like permease family 745 837 3.8E-11 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 TVD_08675 337019acb7c1aa30a3f0e5849dab88f0 142 Pfam PF04343 Protein of unknown function, DUF488 6 112 9.9E-28 T 11-10-2018 IPR007438 Protein of unknown function DUF488 TVD_00500 4a1b6f5fa41028152edbd24b8398bdeb 1107 Pfam PF04932 O-Antigen ligase 735 849 2.3E-6 T 11-10-2018 IPR007016 O-antigen ligase-related TVD_00500 4a1b6f5fa41028152edbd24b8398bdeb 1107 Pfam PF04892 VanZ like family 24 143 5.0E-10 T 11-10-2018 IPR006976 VanZ-like TVD_07385 86154c3127a61d0ded1cff84f8eb9e55 135 SUPERFAMILY SSF46458 5 130 1.86E-11 T 11-10-2018 IPR009050 Globin-like superfamily TVD_07385 86154c3127a61d0ded1cff84f8eb9e55 135 Gene3D G3DSA:1.10.490.10 3 133 1.4E-18 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TVD_12820 cbc42221f5d93f706ac510cfff1a2cff 72 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 9.7E-23 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type TVD_12820 cbc42221f5d93f706ac510cfff1a2cff 72 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 3.0E-19 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type TVD_00790 248824fefd11316e2a17289ab24f9c4f 511 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 258 502 8.2E-101 T 11-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase TVD_00790 248824fefd11316e2a17289ab24f9c4f 511 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 23 181 4.5E-47 T 11-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices TVD_12830 78a053caf26f80c359516be1049188db 277 Pfam PF05751 FixH 166 268 2.2E-10 T 11-10-2018 IPR008620 Nitrogen fixation protein FixH TVD_06360 a0815ac7609acc0967d9a63899770be9 247 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 218 2.5E-26 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TVD_09980 12e56f8446bf5adbaf7ae53f9c02fe16 201 Gene3D G3DSA:1.20.120.740 21 197 1.0E-39 T 11-10-2018 TVD_09980 12e56f8446bf5adbaf7ae53f9c02fe16 201 Pfam PF03695 Uncharacterised protein family (UPF0149) 25 191 6.6E-26 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 TVD_09980 12e56f8446bf5adbaf7ae53f9c02fe16 201 SUPERFAMILY SSF101327 26 189 1.05E-23 T 11-10-2018 IPR036255 YgfB-like superfamily TVD_10075 eaed8fb16c1525a749320a048ae3af82 113 SUPERFAMILY SSF55331 1 113 6.72E-32 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily TVD_10075 eaed8fb16c1525a749320a048ae3af82 113 ProDom PD004816 MACROPHAGE MIGRATION INHIBITORY FACTOR TAUTOMERASE MIF PHENYLPYRUVATE CYTOKINE RESPONSE INFLAMMATORY 20 113 4.0E-24 T 11-10-2018 IPR001398 Macrophage migration inhibitory factor TVD_10075 eaed8fb16c1525a749320a048ae3af82 113 Pfam PF01187 Macrophage migration inhibitory factor (MIF) 2 113 2.1E-21 T 11-10-2018 IPR001398 Macrophage migration inhibitory factor TVD_10075 eaed8fb16c1525a749320a048ae3af82 113 Gene3D G3DSA:3.30.429.10 1 113 8.7E-37 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily TVD_01325 a990f3040061169725c97d484b28fc97 325 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 27 311 2.0E-67 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 TVD_01325 a990f3040061169725c97d484b28fc97 325 PIRSF PIRSF026649 16 320 6.7E-82 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 TVD_02530 1621103ff7487bbfbc7cd2519e54d9ce 181 Pfam PF07295 Zinc-ribbon containing domain 30 174 1.1E-48 T 11-10-2018 IPR009912 Zinc-ribbon containing domain TVD_06070 4246722c98495db938d91f45942caa2b 437 Gene3D G3DSA:3.30.460.10 23 138 4.7E-5 T 11-10-2018 TVD_06070 4246722c98495db938d91f45942caa2b 437 SUPERFAMILY SSF81301 7 138 1.6E-16 T 11-10-2018 TVD_09055 922a52742f73726ad97c0a0aca956437 317 Pfam PF00892 EamA-like transporter family 22 154 5.7E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TVD_09055 922a52742f73726ad97c0a0aca956437 317 Pfam PF00892 EamA-like transporter family 172 299 2.4E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TVD_09055 922a52742f73726ad97c0a0aca956437 317 SUPERFAMILY SSF103481 199 303 1.57E-13 T 11-10-2018 TVD_09055 922a52742f73726ad97c0a0aca956437 317 SUPERFAMILY SSF103481 55 154 2.09E-13 T 11-10-2018 TVD_09300 69c0f879c7188aa226ac39365c50f48d 189 Pfam PF06776 Invasion associated locus B (IalB) protein 55 188 7.9E-29 T 11-10-2018 IPR010642 Invasion protein B TVD_09300 69c0f879c7188aa226ac39365c50f48d 189 Gene3D G3DSA:2.60.40.1880 52 189 6.3E-34 T 11-10-2018 IPR038696 Invasion protein B superfamily TVD_02225 ec8df06e6ed31fa89a5b50193567a7fb 296 SUPERFAMILY SSF51261 167 292 7.32E-49 T 11-10-2018 IPR011055 Duplicated hybrid motif TVD_02225 ec8df06e6ed31fa89a5b50193567a7fb 296 Gene3D G3DSA:2.70.70.10 144 295 2.0E-43 T 11-10-2018 IPR011055 Duplicated hybrid motif TVD_02225 ec8df06e6ed31fa89a5b50193567a7fb 296 Pfam PF01551 Peptidase family M23 193 288 6.1E-30 T 11-10-2018 IPR016047 Peptidase M23 TVD_12765 c09a4faf6a3c5cfa5e97ded20c42b84b 288 SUPERFAMILY SSF50199 60 188 3.66E-7 T 11-10-2018 TVD_12000 16dc9af58ea4242098cc0856ede8807a 200 Gene3D G3DSA:1.10.4060.10 120 200 1.7E-11 T 11-10-2018 TVD_12000 16dc9af58ea4242098cc0856ede8807a 200 Gene3D G3DSA:2.30.130.40 1 118 1.8E-34 T 11-10-2018 TVD_12000 16dc9af58ea4242098cc0856ede8807a 200 SMART SM00464 3 196 3.8E-14 T 11-10-2018 IPR003111 Lon, substrate-binding domain TVD_12000 16dc9af58ea4242098cc0856ede8807a 200 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 190 1.3E-20 T 11-10-2018 IPR003111 Lon, substrate-binding domain TVD_12000 16dc9af58ea4242098cc0856ede8807a 200 SUPERFAMILY SSF88697 3 194 6.21E-49 T 11-10-2018 IPR015947 PUA-like superfamily TVD_06310 2f949d6e15527c66ffe3d209c3b39029 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 5.1E-28 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TVD_06310 2f949d6e15527c66ffe3d209c3b39029 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 5.1E-28 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TVD_06310 2f949d6e15527c66ffe3d209c3b39029 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 5.1E-28 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TVD_06310 2f949d6e15527c66ffe3d209c3b39029 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 5.1E-28 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TVD_06310 2f949d6e15527c66ffe3d209c3b39029 257 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 253 1.7E-67 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 TVD_06310 2f949d6e15527c66ffe3d209c3b39029 257 Pfam PF01311 Bacterial export proteins, family 1 14 245 2.2E-65 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TVD_06395 09fb18cf65b6e5fe217ed12371b25167 123 Gene3D G3DSA:3.40.1690.10 17 95 1.4E-23 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TVD_06395 09fb18cf65b6e5fe217ed12371b25167 123 Pfam PF01312 FlhB HrpN YscU SpaS Family 20 90 9.4E-20 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TVD_06395 09fb18cf65b6e5fe217ed12371b25167 123 SUPERFAMILY SSF160544 19 92 1.96E-21 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal TVD_06660 b50cafd6a6b4cf5ce49959e026ef5861 122 Pfam PF02635 DsrE/DsrF-like family 8 94 1.8E-6 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein TVD_06660 b50cafd6a6b4cf5ce49959e026ef5861 122 Gene3D G3DSA:3.40.1260.10 1 120 1.6E-26 T 11-10-2018 IPR027396 DsrEFH-like TVD_06660 b50cafd6a6b4cf5ce49959e026ef5861 122 SUPERFAMILY SSF75169 8 116 9.22E-12 T 11-10-2018 IPR027396 DsrEFH-like TVD_01270 f1acec9c5d0f85f7657ae4b15938af64 379 SUPERFAMILY SSF102405 87 294 4.27E-46 T 11-10-2018 TVD_01270 f1acec9c5d0f85f7657ae4b15938af64 379 Pfam PF02481 DNA recombination-mediator protein A 83 285 4.3E-77 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 TVD_01270 f1acec9c5d0f85f7657ae4b15938af64 379 Gene3D G3DSA:3.40.50.450 2 297 2.1E-107 T 11-10-2018 TVD_01270 f1acec9c5d0f85f7657ae4b15938af64 379 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 82 294 3.3E-77 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 TVD_01270 f1acec9c5d0f85f7657ae4b15938af64 379 Gene3D G3DSA:1.10.10.10 299 369 5.8E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_13720 2e28c024487fafbeffaf8eeeec03265d 391 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 18 235 1.6E-68 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TVD_13720 2e28c024487fafbeffaf8eeeec03265d 391 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 13 247 16.208 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TVD_13720 2e28c024487fafbeffaf8eeeec03265d 391 ProSitePatterns PS01218 TatC family signature. 163 182 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site TVD_13720 2e28c024487fafbeffaf8eeeec03265d 391 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 17 44 3.8E-46 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TVD_13720 2e28c024487fafbeffaf8eeeec03265d 391 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 94 112 3.8E-46 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TVD_13720 2e28c024487fafbeffaf8eeeec03265d 391 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 163 191 3.8E-46 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TVD_13720 2e28c024487fafbeffaf8eeeec03265d 391 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 112 138 3.8E-46 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TVD_13720 2e28c024487fafbeffaf8eeeec03265d 391 Pfam PF00902 Sec-independent protein translocase protein (TatC) 21 230 4.0E-64 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TVD_00705 abb655db172569b12359af6f53353f3a 442 Pfam PF02321 Outer membrane efflux protein 236 427 8.0E-35 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_00705 abb655db172569b12359af6f53353f3a 442 Pfam PF02321 Outer membrane efflux protein 26 212 3.1E-30 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 TVD_00705 abb655db172569b12359af6f53353f3a 442 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 440 6.9E-96 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 TVD_00705 abb655db172569b12359af6f53353f3a 442 SUPERFAMILY SSF56954 3 430 1.96E-85 T 11-10-2018 TVD_00705 abb655db172569b12359af6f53353f3a 442 Gene3D G3DSA:1.20.1600.10 24 442 1.0E-109 T 11-10-2018 TVD_05555 da189152e20c5393aab5c294f5a94df0 159 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 129 6.5E-44 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type TVD_05555 da189152e20c5393aab5c294f5a94df0 159 SUPERFAMILY SSF46785 2 133 7.32E-37 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily TVD_05555 da189152e20c5393aab5c294f5a94df0 159 Gene3D G3DSA:1.10.10.10 1 144 2.1E-53 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily TVD_05555 da189152e20c5393aab5c294f5a94df0 159 Pfam PF02082 Transcriptional regulator 1 83 3.0E-28 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type TVD_05555 da189152e20c5393aab5c294f5a94df0 159 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 132 2.1E-63 T 11-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 TVD_05175 6b368ed01513d3e86035965f7c551e06 313 Pfam PF01548 Transposase 7 147 3.3E-21 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 TVD_05175 6b368ed01513d3e86035965f7c551e06 313 Pfam PF02371 Transposase IS116/IS110/IS902 family 187 270 6.3E-19 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 TVD_02915 6b368ed01513d3e86035965f7c551e06 313 Pfam PF01548 Transposase 7 147 3.3E-21 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 TVD_02915 6b368ed01513d3e86035965f7c551e06 313 Pfam PF02371 Transposase IS116/IS110/IS902 family 187 270 6.3E-19 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 TVD_10365 fb70137aad92aec3ec06397c66d93f6d 423 Pfam PF04143 Sulphur transport 30 381 1.4E-54 T 11-10-2018 IPR007272 Sulphur transport domain TVD_01175 60646055b44ed63dfe76b2010c7bab09 127 Pfam PF00085 Thioredoxin 20 104 1.6E-7 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 TVD_01175 60646055b44ed63dfe76b2010c7bab09 127 SUPERFAMILY SSF52833 14 127 1.58E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily TVD_01175 60646055b44ed63dfe76b2010c7bab09 127 Gene3D G3DSA:3.40.30.10 7 108 3.8E-10 T 11-10-2018 TVD_01175 60646055b44ed63dfe76b2010c7bab09 127 ProSitePatterns PS00194 Thioredoxin family active site. 37 55 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 TVD_04765 ae27d376359242ff9118da2d4dd73ffc 187 Gene3D G3DSA:1.20.120.10 54 186 5.4E-20 T 11-10-2018 TVD_04765 ae27d376359242ff9118da2d4dd73ffc 187 Pfam PF01322 Cytochrome C' 62 185 1.7E-23 T 11-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 TVD_04765 ae27d376359242ff9118da2d4dd73ffc 187 SUPERFAMILY SSF47175 62 187 1.46E-12 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 TVD_06005 c94c3e2fe9b3de1dad34c652645be039 233 Pfam PF03923 Uncharacterized lipoprotein 47 190 5.8E-8 T 11-10-2018 IPR005619 Uncharacterised protein family, YajG TVD_06010 7ee7c733a7c349cf69289acccd6e33e2 135 Pfam PF06271 RDD family 1 128 6.5E-27 T 11-10-2018 IPR010432 RDD TVD_02255 4545e35efa0bde0b7f0d422f31d5a897 287 Gene3D G3DSA:1.20.120.1220 126 284 8.3E-7 T 11-10-2018 TVD_02255 4545e35efa0bde0b7f0d422f31d5a897 287 Pfam PF01478 Type IV leader peptidase family 135 244 1.0E-28 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 TVD_02255 4545e35efa0bde0b7f0d422f31d5a897 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 1.1E-27 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial TVD_02255 4545e35efa0bde0b7f0d422f31d5a897 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 1.1E-27 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial TVD_02255 4545e35efa0bde0b7f0d422f31d5a897 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 144 161 1.1E-27 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial TVD_02255 4545e35efa0bde0b7f0d422f31d5a897 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 1.1E-27 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial TVD_02255 4545e35efa0bde0b7f0d422f31d5a897 287 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 19 124 2.0E-33 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal TVD_01430 cb6116782ffe322a7fbcf34689d20239 171 Pfam PF14341 PilX N-terminal 8 57 1.2E-13 T 11-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain TVD_00370 1a967684d06eb640aa76609c0fb08e33 457 Pfam PF00501 AMP-binding enzyme 193 311 1.8E-5 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 TVD_00370 1a967684d06eb640aa76609c0fb08e33 457 Gene3D G3DSA:3.40.50.12780 26 353 4.1E-82 T 11-10-2018 TVD_00370 1a967684d06eb640aa76609c0fb08e33 457 SUPERFAMILY SSF56801 46 446 1.31E-25 T 11-10-2018 TVD_11780 583a29aa5a69eb5abdb59791d927654c 87 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 76 7.1E-23 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_11780 583a29aa5a69eb5abdb59791d927654c 87 SUPERFAMILY SSF54565 1 76 7.32E-26 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_11780 583a29aa5a69eb5abdb59791d927654c 87 Pfam PF00886 Ribosomal protein S16 8 68 3.2E-21 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_11780 583a29aa5a69eb5abdb59791d927654c 87 Gene3D G3DSA:3.30.1320.10 1 87 3.7E-27 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_11780 583a29aa5a69eb5abdb59791d927654c 87 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 21.491 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 TVD_10120 3616d4bf27c5086cb7bd1bfcbf2f9bc5 118 Pfam PF09842 Predicted membrane protein (DUF2069) 8 108 2.1E-27 T 11-10-2018 IPR018643 Protein of unknown function DUF2069, membrane TVD_09595 3ea42fe5af4d491f94398e443096154b 287 SUPERFAMILY SSF103481 44 142 1.31E-8 T 11-10-2018 TVD_09595 3ea42fe5af4d491f94398e443096154b 287 SUPERFAMILY SSF103481 186 280 6.93E-5 T 11-10-2018 TVD_09595 3ea42fe5af4d491f94398e443096154b 287 Pfam PF00892 EamA-like transporter family 149 275 1.6E-6 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TVD_09595 3ea42fe5af4d491f94398e443096154b 287 Pfam PF00892 EamA-like transporter family 8 139 2.2E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 TVD_09070 fdf0edc68bddb858f597e8530abaa20c 238 Pfam PF08378 Nuclease-related domain 68 188 5.4E-21 T 11-10-2018 IPR011528 Nuclease-related domain, NERD TVD_13550 a2ad8fb6eb46d75234198334baac8fba 128 Pfam PF03899 ATP synthase I chain 14 105 1.8E-9 T 11-10-2018 IPR005598 ATP synthase protein I TVD_11585 189fa10356aa210a01aa79ef4c15ebc9 167 Pfam PF06295 Protein of unknown function (DUF1043) 25 110 1.8E-20 T 11-10-2018 IPR009386 Protein of unknown function DUF1043 TVD_08465 6058e366e6a09df9cd27f489cf233611 384 SUPERFAMILY SSF143422 16 194 5.76E-18 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 TVD_08465 6058e366e6a09df9cd27f489cf233611 384 SMART SM01321 14 188 6.4E-6 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 TVD_09555 094c50302046b9f2ccf3ca234cb3818e 359 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 170 3.3E-25 T 11-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase TVD_00960 9e58fe9482d37237226d023b091a0f2c 118 Pfam PF11743 Protein of unknown function (DUF3301) 4 96 1.2E-26 T 11-10-2018 IPR021732 Protein of unknown function DUF3301 TVD_07105 11e2f1e91f17611d1edcd3a0acdb9049 278 Pfam PF01497 Periplasmic binding protein 24 248 8.4E-32 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain TVD_07105 11e2f1e91f17611d1edcd3a0acdb9049 278 Gene3D G3DSA:3.40.50.1980 20 138 2.6E-39 T 11-10-2018 TVD_07105 11e2f1e91f17611d1edcd3a0acdb9049 278 Gene3D G3DSA:3.40.50.1980 141 271 1.5E-26 T 11-10-2018 TVD_07105 11e2f1e91f17611d1edcd3a0acdb9049 278 SUPERFAMILY SSF53807 4 266 2.39E-66 T 11-10-2018 TVD_00235 55040b57b5bc6f88c6e40af476057709 258 Pfam PF02698 DUF218 domain 79 241 8.9E-30 T 11-10-2018 IPR003848 Domain of unknown function DUF218 TVD_02075 48ec995b1a86b424122023e4a3b27efb 302 Pfam PF05425 Copper resistance protein D 193 293 2.0E-22 T 11-10-2018 IPR008457 Copper resistance protein D GO:0016021 TVD_02725 32994979959e66cae66dd84441bd31ab 108 Pfam PF12321 Protein of unknown function (DUF3634) 6 93 5.4E-13 T 11-10-2018 IPR022090 Protein of unknown function DUF3634 TVD_11750 ea580479a7e9cec090400d818dd922ee 230 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 141 222 1.3E-21 T 11-10-2018 IPR030999 Sulfur oxidation c-type cytochrome SoxX TVD_11750 ea580479a7e9cec090400d818dd922ee 230 SUPERFAMILY SSF46626 15 221 5.17E-13 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_11750 ea580479a7e9cec090400d818dd922ee 230 Gene3D G3DSA:1.10.760.10 49 229 5.7E-54 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 TVD_11750 ea580479a7e9cec090400d818dd922ee 230 Pfam PF00034 Cytochrome c 138 221 9.1E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 TVD_05925 9cf7feb72985457840eaa9103e38254d 219 Gene3D G3DSA:3.30.420.10 45 189 1.9E-16 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 TVD_05925 9cf7feb72985457840eaa9103e38254d 219 Pfam PF00665 Integrase core domain 48 161 1.7E-31 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 TVD_05925 9cf7feb72985457840eaa9103e38254d 219 SUPERFAMILY SSF53098 40 208 9.23E-43 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily TVD_00330 aa9ff0762f2bb913f93875feaed57520 355 Gene3D G3DSA:3.40.630.30 26 313 4.7E-25 T 11-10-2018 TVD_00330 aa9ff0762f2bb913f93875feaed57520 355 Pfam PF13480 Acetyltransferase (GNAT) domain 164 287 4.4E-17 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 TVD_00330 aa9ff0762f2bb913f93875feaed57520 355 SUPERFAMILY SSF55729 154 315 9.71E-38 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase TVD_00330 aa9ff0762f2bb913f93875feaed57520 355 Gene3D G3DSA:3.40.630.30 147 304 4.7E-25 T 11-10-2018 TVD_00330 aa9ff0762f2bb913f93875feaed57520 355 TIGRFAM TIGR03019 pepcterm_femAB: FemAB-related protein, PEP-CTERM system-associated 26 355 2.0E-152 T 11-10-2018 IPR017469 PEP-CTERM system-associated, FemAB-related TVD_03440 0db82a212329c10b86c416d1e2834c69 289 SUPERFAMILY SSF69618 17 281 5.1E-48 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_03440 0db82a212329c10b86c416d1e2834c69 289 Pfam PF02602 Uroporphyrinogen-III synthase HemD 30 263 2.6E-38 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 TVD_03440 0db82a212329c10b86c416d1e2834c69 289 Gene3D G3DSA:3.40.50.10090 48 180 2.1E-52 T 11-10-2018 TVD_03440 0db82a212329c10b86c416d1e2834c69 289 Gene3D G3DSA:3.40.50.10090 21 263 2.1E-52 T 11-10-2018 TVD_08280 41073347280bb6cd41c1b4e6f39b5f79 129 Pfam PF09722 Protein of unknown function (DUF2384) 77 127 1.9E-10 T 11-10-2018 IPR024467 Domain of unknown function DUF2384 TVD_08280 41073347280bb6cd41c1b4e6f39b5f79 129 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 18 124 1.0E-34 T 11-10-2018 IPR020358 Uncharacterised protein family Y4oB TVD_00445 461fca47133d503066fc7037abf1f89a 479 Pfam PF04932 O-Antigen ligase 215 357 1.5E-15 T 11-10-2018 IPR007016 O-antigen ligase-related TVD_00445 461fca47133d503066fc7037abf1f89a 479 TIGRFAM TIGR03097 PEP_O_lig_1: probable O-glycosylation ligase, exosortase A-associated 2 424 3.2E-101 T 11-10-2018 IPR017528 Conserved hypothetical protein CHP03097, O-antigen ligase-related TVD_11405 3ad8feba0405ef11b6a79c95c573af39 452 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 32 46 - T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TVD_11405 3ad8feba0405ef11b6a79c95c573af39 452 Pfam PF00209 Sodium:neurotransmitter symporter family 154 448 2.6E-23 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TVD_11405 3ad8feba0405ef11b6a79c95c573af39 452 Pfam PF00209 Sodium:neurotransmitter symporter family 9 126 7.0E-27 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TVD_11405 3ad8feba0405ef11b6a79c95c573af39 452 SUPERFAMILY SSF161070 9 449 6.15E-132 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 TVD_11405 3ad8feba0405ef11b6a79c95c573af39 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 16 37 1.1E-12 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TVD_11405 3ad8feba0405ef11b6a79c95c573af39 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 305 324 1.1E-12 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TVD_11405 3ad8feba0405ef11b6a79c95c573af39 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 45 64 1.1E-12 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 TVD_07130 75ee44501894778b64001e11997f5b4b 131 SUPERFAMILY SSF54593 10 129 1.29E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TVD_07130 75ee44501894778b64001e11997f5b4b 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 126 3.3E-8 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TVD_07130 75ee44501894778b64001e11997f5b4b 131 Gene3D G3DSA:3.10.180.10 15 130 1.3E-22 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TVD_06095 336095aa417ffdf7b5eb8b3b22cf1a57 262 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 5 76 7.6E-14 T 11-10-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 TVD_05870 985e5b6ad0f2214b690ef890a080d994 210 Pfam PF04250 Protein of unknown function (DUF429) 7 194 3.9E-20 T 11-10-2018 IPR007362 Protein of unknown function DUF429 TVD_03040 731e910ee498e060cdc4c5231bc20136 65 Pfam PF11381 Protein of unknown function (DUF3185) 3 60 2.5E-15 T 11-10-2018 IPR021521 Protein of unknown function DUF3185 TVD_07325 71db073b959274e63c8edba7ed9c9058 130 Pfam PF07681 DoxX 10 89 1.4E-17 T 11-10-2018 IPR032808 DoxX family TVD_11715 7f352fee5992c5c96e55b7794a422eb0 249 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 207 2.0E-30 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TVD_06530 f305313881fc5a50c0ee18e401dc78a9 105 Pfam PF06305 Lipopolysaccharide assembly protein A domain 32 94 9.6E-12 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 TVD_04425 a17f5c8feb92d4c3a0ad9a7b2a4ddb1b 518 Gene3D G3DSA:2.150.10.10 444 518 6.4E-14 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TVD_04425 a17f5c8feb92d4c3a0ad9a7b2a4ddb1b 518 SUPERFAMILY SSF51120 437 518 6.54E-16 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal TVD_04385 e6ede22cc9b866e860bfe984315cb752 255 Pfam PF02348 Cytidylyltransferase 5 218 4.6E-48 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 TVD_04385 e6ede22cc9b866e860bfe984315cb752 255 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 2 250 38.234 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 TVD_04385 e6ede22cc9b866e860bfe984315cb752 255 SUPERFAMILY SSF53448 4 248 7.27E-56 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_04385 e6ede22cc9b866e860bfe984315cb752 255 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 243 7.6E-74 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 TVD_04385 e6ede22cc9b866e860bfe984315cb752 255 Gene3D G3DSA:3.90.550.10 4 250 8.9E-83 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases TVD_08075 5930a57b8c2344b070c393b0a12f91e0 126 Gene3D G3DSA:3.30.310.70 1 124 2.7E-14 T 11-10-2018 IPR035923 TT1751-like domain superfamily TVD_08075 5930a57b8c2344b070c393b0a12f91e0 126 SUPERFAMILY SSF103247 2 123 2.22E-18 T 11-10-2018 IPR035923 TT1751-like domain superfamily TVD_08075 5930a57b8c2344b070c393b0a12f91e0 126 Pfam PF03625 Domain of unknown function DUF302 32 89 1.8E-5 T 11-10-2018 IPR005180 Domain of unknown function DUF302 TVD_05290 10e6be383f3dd471cc32fa858e6e900e 123 Gene3D G3DSA:3.40.50.720 4 108 2.6E-6 T 11-10-2018 TVD_05290 10e6be383f3dd471cc32fa858e6e900e 123 SUPERFAMILY SSF51735 1 96 1.93E-10 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily TVD_11870 99da72fdc59308c56e776bc1d10ca214 388 Pfam PF06804 NlpB/DapX lipoprotein 39 380 3.3E-40 T 11-10-2018 IPR010653 NlpB/DapX lipoprotein TVD_11870 99da72fdc59308c56e776bc1d10ca214 388 Gene3D G3DSA:3.30.310.170 268 387 3.0E-10 T 11-10-2018 TVD_03220 5baba556df5ccd43434aa7344a0cd950 365 Pfam PF01594 AI-2E family transporter 25 347 1.4E-45 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like TVD_10015 365cee04a0a79acc51d45c1d4ab9e91a 209 SUPERFAMILY SSF53474 8 194 3.14E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold TVD_10015 365cee04a0a79acc51d45c1d4ab9e91a 209 Pfam PF12697 Alpha/beta hydrolase family 8 170 2.4E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 TVD_07475 ddd8073a8ee635126bd0550a9c6ec14a 136 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 121 1.2E-24 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 TVD_07475 ddd8073a8ee635126bd0550a9c6ec14a 136 TIGRFAM TIGR00494 crcB: protein CrcB 9 121 1.8E-26 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 TVD_07475 ddd8073a8ee635126bd0550a9c6ec14a 136 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 8 126 18.828 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 TVD_08860 b193b1165971f2bf9e4067b01576b8f2 234 Pfam PF09335 SNARE associated Golgi protein 70 183 4.5E-13 T 11-10-2018 IPR032816 SNARE associated Golgi protein TVD_04540 5383f6f8cdd8282a88e5206d5ca9e486 455 Pfam PF03631 Virulence factor BrkB 53 303 2.1E-47 T 11-10-2018 IPR017039 Virulence factor BrkB TVD_04540 5383f6f8cdd8282a88e5206d5ca9e486 455 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 46 300 2.4E-41 T 11-10-2018 IPR017039 Virulence factor BrkB TVD_05840 cb8947fd0b540dd821587ce8b0f063ec 333 Gene3D G3DSA:3.40.50.11660 117 271 9.5E-20 T 11-10-2018 IPR038577 GT10-like superfamily TVD_05840 cb8947fd0b540dd821587ce8b0f063ec 333 SUPERFAMILY SSF53756 4 278 1.04E-42 T 11-10-2018 TVD_05840 cb8947fd0b540dd821587ce8b0f063ec 333 Pfam PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term 134 247 1.6E-7 T 11-10-2018 IPR001503 Glycosyl transferase family 10 GO:0006486|GO:0008417|GO:0016020 TVD_02830 4ed228844c61dc65b3fbc33e272f25f1 399 Pfam PF05940 NnrS protein 15 393 8.7E-107 T 11-10-2018 IPR010266 NnrS TVD_01495 24766bb6846b4f2644b1b08aad9c8419 113 Pfam PF01934 Protein of unknown function DUF86 15 105 2.0E-27 T 11-10-2018 IPR008201 Protein of unknown function DUF86 TVD_03715 ed351e1b9bf4d0c824f8ea66ab3e57d0 319 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 307 5.8E-81 T 11-10-2018 IPR007296 Domain of unknown function DUF403 TVD_05930 712faee22748e4e7f61935ebd29918f7 247 Pfam PF11784 Protein of unknown function (DUF3320) 66 114 4.9E-16 T 11-10-2018 IPR021754 Protein of unknown function DUF3320 TVD_01160 f09ba5cb884c19859f1624fc0c1d4483 349 Gene3D G3DSA:2.40.128.140 45 347 2.7E-79 T 11-10-2018 IPR037107 Putative outer membrane protein superfamily TVD_01160 f09ba5cb884c19859f1624fc0c1d4483 349 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 51 347 2.7E-98 T 11-10-2018 IPR018707 Protein of unknown function DUF2219 TVD_05695 b653d69a1e20557ceb6933ec70b90889 202 Pfam PF11845 Protein of unknown function (DUF3365) 15 200 2.5E-26 T 11-10-2018 IPR021796 Protein of unknown function DUF3365 TVD_13200 c8411840c95f0cdf571a69fb62387938 74 SUPERFAMILY SSF57783 4 42 5.44E-5 T 11-10-2018 TVD_12845 25f9292370cbd926f6114d24543c8d79 72 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 15 54 5.1E-9 T 11-10-2018 IPR008621 Cbb3-type cytochrome oxidase component TVD_11165 dc53cb0a449098d457a78756c9313151 171 Pfam PF13767 Domain of unknown function (DUF4168) 87 163 6.1E-20 T 11-10-2018 IPR025433 Domain of unknown function DUF4168 TVD_01810 035f5b3f4fdb02f0f8542816de35cec4 187 Pfam PF05137 Fimbrial assembly protein (PilN) 100 176 1.4E-18 T 11-10-2018 IPR007813 Fimbrial assembly PilN TVD_09305 f558a4f75f135a468118bd1d0117c2f7 187 Pfam PF01899 Na+/H+ ion antiporter subunit 31 167 1.9E-22 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 TVD_10195 7c1ab55a780d6e433cb209f2e664daf7 632 Gene3D G3DSA:3.30.2010.10 84 176 1.4E-30 T 11-10-2018 TVD_10195 7c1ab55a780d6e433cb209f2e664daf7 632 Pfam PF01435 Peptidase family M48 93 305 2.0E-33 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TVD_09920 a8c29cc90290d1b70c49ca075aa5ff29 256 Pfam PF07103 Protein of unknown function (DUF1365) 5 249 9.0E-68 T 11-10-2018 IPR010775 Protein of unknown function DUF1365 TVD_11810 566504c6d20b0693b102d2263c9b49b9 203 Pfam PF12007 Protein of unknown function (DUF3501) 9 199 1.7E-75 T 11-10-2018 IPR021890 Protein of unknown function DUF3501 TVD_08475 f76e4a531583620b64f3c8604a00bfa1 100 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 38 91 3.0E-21 T 11-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system TVD_05030 c0e60eab0d092d11b271f80b1b46e09d 242 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 17 226 5.1E-27 T 11-10-2018 TVD_08800 b504477ce616a123e38cf77620720efb 343 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 3 260 1.8E-81 T 11-10-2018 IPR018712 Domain of unknown function DUF2235 TVD_09750 1af2ed27601ee2bc80ced3e49b035159 262 Pfam PF01925 Sulfite exporter TauE/SafE 12 248 1.2E-30 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 TVD_10130 eacc1e32c96053825891ddf0d0a42b10 372 Pfam PF01594 AI-2E family transporter 21 346 1.8E-61 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like TVD_01190 d9c277a20b906322c01675bc80dc4c16 105 Pfam PF10084 Uncharacterized protein conserved in bacteria (DUF2322) 3 95 2.2E-33 T 11-10-2018 IPR016755 Uncharacterised conserved protein UCP019302 TVD_12235 d74131fbf4b24bdc9b98ef45985eb119 74 Pfam PF10276 Zinc-finger domain 40 68 3.8E-7 T 11-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 TVD_12235 d74131fbf4b24bdc9b98ef45985eb119 74 Gene3D G3DSA:2.60.260.40 15 71 1.5E-10 T 11-10-2018 TVD_00135 b624bf87d02b1cfed7fbbdbcf60e0a5b 72 Pfam PF11197 Protein of unknown function (DUF2835) 4 71 3.8E-21 T 11-10-2018 IPR021363 Protein of unknown function DUF2835 TVD_04980 5fb8a10ddf4e9fbd6153d9a40cb26cad 161 Pfam PF06853 Protein of unknown function (DUF1249) 32 147 7.4E-34 T 11-10-2018 IPR009659 Protein of unknown function DUF1249 TVD_09890 237908fa7b1ce9c57bffbe87aa32dc40 70 Pfam PF14070 Putative motility protein 6 69 1.4E-12 T 11-10-2018 IPR025906 Putative motility protein TVD_04355 2c7d6d15006c413107314f0ee24661ff 212 Pfam PF01618 MotA/TolQ/ExbB proton channel family 68 188 1.9E-32 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel TVD_09990 26ee8398e659878a13f6ea97e8b763bc 75 Pfam PF06005 Cell division protein ZapB 13 70 4.5E-7 T 11-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 TVD_09990 26ee8398e659878a13f6ea97e8b763bc 75 Gene3D G3DSA:1.10.357.10 1 71 5.4E-5 T 11-10-2018 TVD_00820 339ff6c8dde4e142dc4c1d040a14ee47 220 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 213 5.3E-52 T 11-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain TVD_09310 9c0daa0adb3a035961e9d8aa950836da 108 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 79 1.3E-12 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 TVD_07010 ce6a856d071eacf22d0fcc047cb49efc 129 Pfam PF05400 Flagellar protein FliT 28 112 1.9E-12 T 11-10-2018 IPR008622 Flagellar protein FliT TVD_04500 1dbb233ee1813f18780741ab4f3437d2 149 SUPERFAMILY SSF54909 13 126 3.85E-5 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel TVD_05815 d29493aeee5a28028d0d2414daac5c93 253 Gene3D G3DSA:3.40.50.150 8 233 6.2E-6 T 11-10-2018 TVD_05815 d29493aeee5a28028d0d2414daac5c93 253 SUPERFAMILY SSF53335 40 202 4.42E-8 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TVD_11925 b27aa7a08512404101f35786998b416e 144 Pfam PF04519 Polymer-forming cytoskeletal 15 115 1.6E-23 T 11-10-2018 IPR007607 Bactofilin A/B TVD_07995 7a85bca7ced40f14fa362687922f3354 234 Pfam PF09335 SNARE associated Golgi protein 71 184 1.4E-26 T 11-10-2018 IPR032816 SNARE associated Golgi protein TVD_03265 e0455e9f834329492d1cd44fd2df5648 227 Pfam PF08892 YqcI/YcgG family 15 222 4.8E-53 T 11-10-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG TVD_01210 4df549eb386182cf9dfd21ccad1f9f10 239 Pfam PF11906 Protein of unknown function (DUF3426) 101 233 1.4E-11 T 11-10-2018 IPR021834 Protein of unknown function DUF3426 TVD_13405 24d64a6c78635eead5ca1bb7ee6f72c6 419 Pfam PF01384 Phosphate transporter family 22 407 1.7E-111 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 TVD_03290 c4681be60a1754c87a91a2dce71a69c2 424 Pfam PF10011 Predicted membrane protein (DUF2254) 21 377 1.1E-87 T 11-10-2018 IPR018723 Protein of unknown function DUF2254, membrane TVD_04955 7aa716971049e78689adcc5d2c93ae58 555 Pfam PF02690 Na+/Pi-cotransporter 21 158 4.6E-27 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TVD_04955 7aa716971049e78689adcc5d2c93ae58 555 Pfam PF02690 Na+/Pi-cotransporter 171 261 2.0E-8 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 TVD_07430 4c09b514282c889f54410ac78c28e935 72 Pfam PF04102 SlyX 6 72 1.3E-18 T 11-10-2018 IPR007236 SlyX TVD_08205 039ea2f6dad55c83025edbb0e00ac013 233 Pfam PF03923 Uncharacterized lipoprotein 47 190 1.8E-7 T 11-10-2018 IPR005619 Uncharacterised protein family, YajG TVD_01125 1a0b504ed19a209b9bb422132d6a753c 222 Pfam PF13511 Domain of unknown function (DUF4124) 22 60 3.9E-13 T 11-10-2018 IPR025392 Domain of unknown function DUF4124 TVD_12915 3c693b56d32aeb226f7b8fbe2252ef90 312 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 296 1.7E-44 T 11-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645